Query         psy7309
Match_columns 454
No_of_seqs    346 out of 2982
Neff          8.2 
Searched_HMMs 29240
Date          Fri Aug 16 23:30:25 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy7309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7309hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4fih_A Serine/threonine-protei 100.0 9.4E-38 3.2E-42  311.0   7.3  163    2-239   170-332 (346)
  2 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-37 4.5E-42  305.5   6.2  168    2-253   132-305 (311)
  3 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-37 4.6E-42  305.1   6.0  171    2-258   126-301 (304)
  4 3hyh_A Carbon catabolite-derep 100.0 2.5E-37 8.5E-42  299.1   4.3  158    2-238   112-270 (275)
  5 4fie_A Serine/threonine-protei 100.0 9.5E-37 3.2E-41  311.1   7.4  163    2-239   247-409 (423)
  6 4b9d_A Serine/threonine-protei 100.0 3.1E-37   1E-41  307.7   0.0  160    3-239   126-285 (350)
  7 3fpq_A Serine/threonine-protei 100.0 6.4E-36 2.2E-40  291.5   7.5  156    2-236   129-288 (290)
  8 4b99_A Mitogen-activated prote 100.0 1.5E-35   5E-40  301.7   4.6  188    2-239   158-353 (398)
  9 4g31_A Eukaryotic translation  100.0 2.7E-35 9.3E-40  288.8   3.3  167    3-236   119-285 (299)
 10 4g3f_A NF-kappa-beta-inducing  100.0 4.6E-35 1.6E-39  290.6   3.8  168    2-239   150-331 (336)
 11 4f9c_A Cell division cycle 7-r 100.0 1.2E-34 3.9E-39  291.7   6.2  211    2-236   117-358 (361)
 12 4g85_A Histidine-tRNA ligase,  100.0 2.5E-33 8.4E-38  294.7  10.5  154  292-453    68-227 (517)
 13 3v5w_A G-protein coupled recep 100.0 1.3E-33 4.5E-38  301.0   6.4  170    2-258   292-469 (689)
 14 3rac_A Histidine-tRNA ligase;  100.0 9.7E-33 3.3E-37  277.5  11.2  171  276-453     6-191 (373)
 15 3od1_A ATP phosphoribosyltrans 100.0 3.7E-32 1.2E-36  275.7  14.5  155  291-453    10-170 (400)
 16 3net_A Histidyl-tRNA synthetas 100.0 3.2E-32 1.1E-36  282.2  13.1  154  292-453    13-189 (465)
 17 3lc0_A Histidyl-tRNA synthetas 100.0 1.1E-31 3.7E-36  276.6  15.7  155  291-453    29-192 (456)
 18 4g84_A Histidine--tRNA ligase, 100.0 5.5E-32 1.9E-36  281.2  13.2  155  291-453    14-174 (464)
 19 3omv_A RAF proto-oncogene seri 100.0   8E-33 2.7E-37  271.7   4.0  161    2-231   132-294 (307)
 20 1z7m_A ATP phosphoribosyltrans 100.0 1.2E-31 4.2E-36  267.0  12.3  154  292-453    23-184 (344)
 21 3uto_A Twitchin; kinase, muscl 100.0 1.4E-32 4.7E-37  292.5   5.1  164    2-240   255-420 (573)
 22 4aoj_A High affinity nerve gro 100.0 1.9E-32 6.4E-37  272.0   5.2  155    2-231   158-313 (329)
 23 4gt4_A Tyrosine-protein kinase 100.0 1.9E-32 6.6E-37  269.5   4.9  155    2-231   145-300 (308)
 24 4asz_A BDNF/NT-3 growth factor 100.0 1.5E-32   5E-37  269.2   3.7  157    2-235   128-285 (299)
 25 4ase_A Vascular endothelial gr 100.0 2.5E-32 8.7E-37  273.4   2.8  155    2-231   185-341 (353)
 26 3fe3_A MAP/microtubule affinit 100.0 1.5E-30   5E-35  258.5  10.2  159    2-239   114-273 (328)
 27 1o6l_A RAC-beta serine/threoni 100.0 1.3E-30 4.6E-35  259.8   9.1  171    2-258   105-280 (337)
 28 3txo_A PKC-L, NPKC-ETA, protei 100.0   4E-31 1.4E-35  265.2   4.9  171    2-258   124-300 (353)
 29 4dc2_A Protein kinase C IOTA t 100.0 1.4E-30 4.9E-35  265.0   7.4  178    2-258   153-338 (396)
 30 3rp9_A Mitogen-activated prote 100.0 9.1E-30 3.1E-34  263.7  12.4  206    2-240   156-406 (458)
 31 1xjd_A Protein kinase C, theta 100.0 1.7E-30 5.8E-35  259.8   6.4  171    2-258   118-289 (345)
 32 1wu7_A Histidyl-tRNA synthetas 100.0 1.8E-29 6.1E-34  260.0  13.6  154  292-453     7-167 (434)
 33 2i0e_A Protein kinase C-beta I 100.0 3.1E-30 1.1E-34  258.8   7.1  171    2-258   121-296 (353)
 34 3ttj_A Mitogen-activated prote 100.0 3.7E-30 1.3E-34  267.5   7.8  187    2-238   164-363 (464)
 35 3o0g_A Cell division protein k 100.0 4.9E-30 1.7E-34  249.4   8.2  183    2-237   101-289 (292)
 36 4e51_A Histidine--tRNA ligase; 100.0 2.8E-29 9.6E-34  259.9  14.3  154  291-452    32-196 (467)
 37 3g33_A Cell division protein k 100.0 4.1E-30 1.4E-34  251.8   7.3  180    2-238   120-304 (308)
 38 3zgw_A Maternal embryonic leuc 100.0 4.2E-30 1.4E-34  257.2   7.0  161    2-239   108-269 (347)
 39 1h4v_B Histidyl-tRNA synthetas 100.0 7.2E-29 2.5E-33  254.6  16.1  153  292-452     4-167 (421)
 40 3n9x_A Phosphotransferase; mal 100.0 1.4E-29 4.7E-34  260.7  10.3  204    2-241   129-372 (432)
 41 1htt_A Histidyl-tRNA synthetas 100.0 5.2E-29 1.8E-33  255.8  14.2  153  292-452     5-168 (423)
 42 3fxz_A Serine/threonine-protei 100.0 5.4E-30 1.8E-34  250.4   6.5  162    2-238   116-277 (297)
 43 3a8x_A Protein kinase C IOTA t 100.0 8.5E-30 2.9E-34  254.7   7.8  178    2-258   110-295 (345)
 44 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.2E-30 3.1E-34  253.6   8.0  159    2-239   108-267 (336)
 45 1fot_A TPK1 delta, CAMP-depend 100.0   8E-30 2.7E-34  252.1   7.3  168    2-258   106-278 (318)
 46 3niz_A Rhodanese family protei 100.0 8.3E-30 2.8E-34  250.7   7.3  184    2-238   119-308 (311)
 47 1ob3_A PFPK5, cell division co 100.0 1.3E-29 4.6E-34  245.9   8.5  181    2-236   100-286 (288)
 48 2r5t_A Serine/threonine-protei 100.0 1.2E-29   4E-34  256.5   7.6  171    2-258   139-313 (373)
 49 3oz6_A Mitogen-activated prote 100.0 6.8E-30 2.3E-34  258.9   5.9  209    3-240   110-338 (388)
 50 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.4E-29 4.7E-34  253.7   7.1  168    2-258   141-313 (350)
 51 4e7w_A Glycogen synthase kinas 100.0 1.7E-29 5.8E-34  257.0   7.6  185    2-240   141-331 (394)
 52 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-29 5.7E-34  273.9   8.0  172    2-259   442-618 (674)
 53 4fr4_A YANK1, serine/threonine 100.0 1.9E-29 6.5E-34  255.8   7.9  174    2-259   115-292 (384)
 54 3kvw_A DYRK2, dual specificity 100.0 9.6E-30 3.3E-34  261.7   5.2  186    2-239   200-417 (429)
 55 1cm8_A Phosphorylated MAP kina 100.0 3.7E-29 1.3E-33  252.0   9.2  177    2-239   128-316 (367)
 56 2yab_A Death-associated protei 100.0 1.5E-29 5.1E-34  254.6   6.0  160    2-236   115-278 (361)
 57 3hmm_A TGF-beta receptor type- 100.0 1.5E-30   5E-35  255.7  -1.4  174    2-230   100-290 (303)
 58 4ejn_A RAC-alpha serine/threon 100.0   2E-29 6.8E-34  260.4   6.9  171    2-258   248-424 (446)
 59 1j1b_A Glycogen synthase kinas 100.0   3E-29   1E-33  257.3   7.3  183    3-239   157-345 (420)
 60 2zv2_A Calcium/calmodulin-depe 100.0 2.2E-29 7.7E-34  245.4   6.0  161    2-235   137-297 (298)
 61 3soa_A Calcium/calmodulin-depe 100.0 3.5E-29 1.2E-33  258.6   7.5  162    2-237   110-274 (444)
 62 3a62_A Ribosomal protein S6 ki 100.0   3E-29   1E-33  248.6   6.7  171    2-258   121-296 (327)
 63 2pmi_A Negative RE, cyclin-dep 100.0 5.8E-29   2E-33  245.2   8.2  190    2-240   108-303 (317)
 64 2fst_X Mitogen-activated prote 100.0 3.2E-29 1.1E-33  252.7   6.4  178    2-240   132-321 (367)
 65 3rgf_A Cyclin-dependent kinase  99.9 5.3E-29 1.8E-33  253.9   6.5  189    3-240   129-343 (405)
 66 3mi9_A Cell division protein k  99.9 5.5E-29 1.9E-33  248.4   6.5  191    2-239   124-320 (351)
 67 1tki_A Titin; serine kinase, m  99.9 1.2E-29 4.2E-34  250.9   1.7  162    2-238   102-265 (321)
 68 2c30_A Serine/threonine-protei  99.9 7.4E-29 2.5E-33  245.1   7.1  162    2-238   141-302 (321)
 69 2eue_A Carbon catabolite derep  99.9 3.1E-29 1.1E-33  241.4   4.0  159    2-239   112-271 (275)
 70 3mtl_A Cell division protein k  99.9 7.2E-29 2.5E-33  245.3   6.5  185    2-240   100-291 (324)
 71 3p1a_A MYT1 kinase, membrane-a  99.9 3.1E-29 1.1E-33  246.5   3.8  153    2-236   157-310 (311)
 72 3gbz_A Kinase, CMGC CDK; ssgci  99.9 1.3E-28 4.3E-33  244.0   7.6  183    2-237   132-325 (329)
 73 3v8s_A RHO-associated protein   99.9 2.8E-29 9.5E-34  256.7   2.9  165    2-237   168-336 (410)
 74 3eb0_A Putative uncharacterize  99.9 4.8E-29 1.6E-33  252.4   4.6  182    2-237   141-328 (383)
 75 1ua2_A CAK, cell division prot  99.9 2.2E-28 7.5E-33  244.0   9.1  185    2-240   112-301 (346)
 76 2bdw_A Hypothetical protein K1  99.9 6.9E-29 2.3E-33  249.7   5.4  160    2-236   128-290 (362)
 77 2y0a_A Death-associated protei  99.9 4.9E-29 1.7E-33  246.9   4.3  160    2-236   114-277 (326)
 78 4aw2_A Serine/threonine-protei  99.9 5.3E-29 1.8E-33  256.6   4.6  165    2-236   175-344 (437)
 79 2xrw_A Mitogen-activated prote  99.9   1E-28 3.5E-33  248.9   6.3  182    2-238   127-326 (371)
 80 3llt_A Serine/threonine kinase  99.9 6.5E-29 2.2E-33  248.6   4.8  182    2-235   137-360 (360)
 81 3uc3_A Serine/threonine-protei  99.9 1.1E-28 3.7E-33  248.1   5.7  166    2-240   116-284 (361)
 82 3q60_A ROP5B; pseudokinase, tr  99.9 5.8E-29   2E-33  250.6   3.4  156    5-236   197-358 (371)
 83 3qyz_A Mitogen-activated prote  99.9 8.4E-29 2.9E-33  248.7   4.6  186    2-239   128-322 (364)
 84 2y94_A 5'-AMP-activated protei  99.9   2E-28 6.8E-33  254.9   7.5  159    2-239   116-275 (476)
 85 3dbq_A Dual specificity protei  99.9   1E-28 3.5E-33  246.1   4.9  165    2-239   108-282 (343)
 86 1nxk_A MAP kinase-activated pr  99.9 9.6E-29 3.3E-33  252.0   4.8  162    2-238   161-329 (400)
 87 3qd2_B Eukaryotic translation   99.9 5.5E-29 1.9E-33  245.2   2.9  167    3-236   165-331 (332)
 88 1kob_A Twitchin; kinase, intra  99.9 1.9E-28 6.5E-33  248.7   6.7  162    2-238   149-312 (387)
 89 3c0i_A Peripheral plasma membr  99.9   1E-28 3.4E-33  247.3   4.4  159    3-236   131-292 (351)
 90 1u5q_A Serine/threonine protei  99.9 1.8E-28   6E-33  245.4   5.9  159    2-237   154-312 (348)
 91 2zmd_A Dual specificity protei  99.9 1.6E-28 5.3E-33  249.6   5.4  163    3-238   156-328 (390)
 92 3tki_A Serine/threonine-protei  99.9 1.7E-28 5.8E-33  242.8   5.4  164    2-239   105-270 (323)
 93 4exu_A Mitogen-activated prote  99.9 5.7E-28 1.9E-32  243.5   9.3  177    2-239   144-332 (371)
 94 2vd5_A DMPK protein; serine/th  99.9 1.2E-28 4.1E-33  252.1   4.0  164    2-236   162-333 (412)
 95 3c4z_A Rhodopsin kinase; Ser/T  99.9 1.9E-28 6.6E-33  258.5   5.5  171    2-258   289-468 (543)
 96 2acx_A G protein-coupled recep  99.9 1.6E-28 5.5E-33  260.1   4.8  169    2-257   286-463 (576)
 97 2qr7_A Ribosomal protein S6 ki  99.9 2.3E-28 7.8E-33  244.0   5.6  161    2-236   116-283 (342)
 98 3e3p_A Protein kinase, putativ  99.9 4.4E-28 1.5E-32  242.3   7.6  183    3-240   130-324 (360)
 99 3lm5_A Serine/threonine-protei  99.9 2.7E-28 9.2E-33  241.5   6.0  162    2-238   131-295 (327)
100 3coi_A Mitogen-activated prote  99.9   2E-27   7E-32  237.4  12.3  177    2-239   126-314 (353)
101 3kk8_A Calcium/calmodulin depe  99.9 3.5E-28 1.2E-32  234.8   6.4  163    2-239   105-270 (284)
102 3is5_A Calcium-dependent prote  99.9 3.4E-28 1.2E-32  235.8   6.3  158    2-236   124-284 (285)
103 2w4o_A Calcium/calmodulin-depe  99.9 3.6E-28 1.2E-32  243.1   6.6  162    2-238   148-313 (349)
104 3mwu_A Calmodulin-domain prote  99.9 4.2E-28 1.4E-32  253.2   7.4  161    2-239   121-285 (486)
105 3kn6_A Ribosomal protein S6 ki  99.9 2.4E-28 8.1E-33  242.0   5.2  170    2-238   106-278 (325)
106 1wak_A Serine/threonine-protei  99.9 1.9E-28 6.5E-33  247.6   4.5  181    2-235   146-396 (397)
107 2x4f_A Myosin light chain kina  99.9 1.7E-28 5.8E-33  247.9   4.0  159    3-236   188-348 (373)
108 3hko_A Calcium/calmodulin-depe  99.9 3.8E-28 1.3E-32  241.3   6.2  169    3-239   169-339 (345)
109 3gni_B Strad alpha; kinase fol  99.9 3.3E-28 1.1E-32  246.4   5.5  196    2-239   128-342 (389)
110 3fdn_A Serine/threonine-protei  99.9 2.3E-28 7.7E-33  235.9   4.1  159    2-240   109-267 (279)
111 3i6u_A CDS1, serine/threonine-  99.9 2.5E-28 8.7E-33  250.3   4.6  163    2-236   239-405 (419)
112 3byv_A Rhoptry kinase; malaria  99.9   1E-28 3.6E-33  249.3   1.5  148    3-236   207-365 (377)
113 4agu_A Cyclin-dependent kinase  99.9 4.7E-28 1.6E-32  237.1   5.9  186    2-238   102-292 (311)
114 3nyv_A Calmodulin-domain prote  99.9 2.6E-28 8.9E-33  254.5   4.1  161    2-239   126-290 (484)
115 3dls_A PAS domain-containing s  99.9 4.1E-28 1.4E-32  241.3   5.1  164    2-252   130-294 (335)
116 3cok_A Serine/threonine-protei  99.9 4.1E-28 1.4E-32  233.7   4.9  160    2-239   112-271 (278)
117 2a2a_A Death-associated protei  99.9 5.4E-28 1.8E-32  238.4   5.7  160    2-236   115-278 (321)
118 3pg1_A Mitogen-activated prote  99.9 1.1E-27 3.7E-32  239.9   7.7  185    2-240   134-326 (362)
119 3nsz_A CK II alpha, casein kin  99.9   6E-28 2.1E-32  238.4   5.8  184    2-238   130-327 (330)
120 2vx3_A Dual specificity tyrosi  99.9 3.6E-28 1.2E-32  245.8   4.0   96    2-144   157-256 (382)
121 2r3i_A Cell division protein k  99.9 2.4E-27 8.1E-32  230.6   9.6  185    2-239   103-292 (299)
122 2y7j_A Phosphorylase B kinase   99.9 5.8E-28   2E-32  243.1   5.5  162    2-235   200-364 (365)
123 3fme_A Dual specificity mitoge  99.9   4E-28 1.4E-32  234.9   4.1  162    2-238   109-274 (290)
124 3lij_A Calcium/calmodulin depe  99.9 5.3E-28 1.8E-32  253.0   5.3  160    2-237   136-298 (494)
125 2b9h_A MAP kinase FUS3, mitoge  99.9 1.8E-27   6E-32  237.2   8.8  191    2-240   112-315 (353)
126 3f3z_A Calcium/calmodulin-depe  99.9 4.2E-28 1.4E-32  233.5   4.0  162    2-239   106-270 (277)
127 2vgo_A Serine/threonine-protei  99.9 8.2E-28 2.8E-32  232.5   5.9  158    2-239   114-271 (284)
128 2eu9_A Dual specificity protei  99.9 7.4E-28 2.5E-32  239.3   5.2  185    2-238   123-341 (355)
129 2rku_A Serine/threonine-protei  99.9 1.7E-27   6E-32  231.4   7.7  161    2-240   115-275 (294)
130 2owb_A Serine/threonine-protei  99.9 1.3E-27 4.4E-32  237.4   6.8  161    2-240   141-301 (335)
131 1blx_A Cyclin-dependent kinase  99.9 1.2E-27 4.2E-32  235.6   6.4  178    2-239   120-305 (326)
132 1z57_A Dual specificity protei  99.9 1.1E-27 3.9E-32  236.2   6.1  176    2-238   118-336 (339)
133 1vzo_A Ribosomal protein S6 ki  99.9 7.6E-28 2.6E-32  241.2   4.8  164    2-236   159-327 (355)
134 2ac3_A MAP kinase-interacting   99.9 7.1E-28 2.4E-32  236.4   4.1  173    2-238   111-303 (316)
135 4aaa_A Cyclin-dependent kinase  99.9 1.7E-27 5.9E-32  235.8   6.6  184    2-236   124-312 (331)
136 1x8b_A WEE1HU, WEE1-like prote  99.9 1.4E-27 4.8E-32  230.0   5.3  154    2-238   115-287 (289)
137 3q5i_A Protein kinase; CDPK, m  99.9   1E-27 3.6E-32  251.4   4.7  162    2-239   146-310 (504)
138 1t4h_A Serine/threonine-protei  99.9 3.2E-27 1.1E-31  229.0   7.5  156    2-236   129-288 (290)
139 2h6d_A 5'-AMP-activated protei  99.9 1.6E-27 5.4E-32  229.2   4.7  159    2-239   111-270 (276)
140 2j7t_A Serine/threonine-protei  99.9 2.5E-27 8.4E-32  230.9   5.8  165    2-238   117-283 (302)
141 2yex_A Serine/threonine-protei  99.9 3.2E-27 1.1E-31  226.9   6.5  164    2-239   105-270 (276)
142 1usy_A ATP phosphoribosyltrans  99.9   1E-26 3.4E-31  224.8   9.7  120  322-453    12-134 (275)
143 3dzo_A Rhoptry kinase domain;   99.9 9.2E-28 3.2E-32  245.7   2.4  152    3-237   212-370 (413)
144 3p23_A Serine/threonine-protei  99.9 3.1E-27 1.1E-31  243.2   6.3  165    3-236   119-289 (432)
145 2jam_A Calcium/calmodulin-depe  99.9 2.9E-27 9.8E-32  231.1   5.7  160    2-237   106-268 (304)
146 3com_A Serine/threonine-protei  99.9 3.8E-27 1.3E-31  230.9   6.6  163    2-239   125-287 (314)
147 1q8y_A SR protein kinase; tran  99.9 3.8E-27 1.3E-31  236.4   6.3  186    2-240   131-343 (373)
148 3a7i_A MST3 kinase, serine/thr  99.9 2.6E-27   9E-32  231.1   4.9  160    2-238   119-278 (303)
149 1phk_A Phosphorylase kinase; g  99.9 4.7E-27 1.6E-31  228.4   6.4  165    2-238   124-291 (298)
150 3aln_A Dual specificity mitoge  99.9 2.1E-27 7.1E-32  234.5   3.8  192    2-282   125-319 (327)
151 3qup_A Tyrosine-protein kinase  99.9 3.8E-27 1.3E-31  232.1   5.6  165    2-241   137-309 (323)
152 3an0_A Dual specificity mitoge  99.9 1.7E-27 5.8E-32  236.4   3.1  165    2-240   153-320 (340)
153 2vwi_A Serine/threonine-protei  99.9 3.4E-27 1.1E-31  229.6   5.1  177    2-240   121-297 (303)
154 3l9p_A Anaplastic lymphoma kin  99.9 2.5E-27 8.4E-32  238.7   4.2  162    2-238   181-346 (367)
155 3bhy_A Death-associated protei  99.9 2.1E-27 7.2E-32  229.2   2.9  162    2-238   108-273 (283)
156 2x7f_A TRAF2 and NCK-interacti  99.9 5.2E-27 1.8E-31  231.3   5.6  162    3-237   130-293 (326)
157 2wtk_C Serine/threonine-protei  99.9   5E-27 1.7E-31  229.0   5.4  164    2-239   109-272 (305)
158 1zy4_A Serine/threonine-protei  99.9 7.8E-27 2.7E-31  226.6   6.7  172    2-236   116-289 (303)
159 3kex_A Receptor tyrosine-prote  99.9   8E-27 2.7E-31  230.5   6.7  155    2-231   115-270 (325)
160 3ork_A Serine/threonine protei  99.9 2.2E-27 7.6E-32  233.0   2.5  166    2-238   116-281 (311)
161 2w5a_A Serine/threonine-protei  99.9 2.6E-27 8.9E-32  228.0   2.6  161    2-239   111-276 (279)
162 2ycf_A Serine/threonine-protei  99.9 1.3E-27 4.4E-32  235.6   0.0  163    2-236   114-280 (322)
163 1qe0_A Histidyl-tRNA synthetas  99.9   6E-26 2.1E-30  232.8  12.4  152  293-452     4-167 (420)
164 3fhr_A MAP kinase-activated pr  99.9 2.9E-27   1E-31  235.1   2.2  165    2-238   128-295 (336)
165 2psq_A Fibroblast growth facto  99.9 6.2E-27 2.1E-31  236.0   4.6  154    2-230   203-357 (370)
166 2dyl_A Dual specificity mitoge  99.9 8.5E-27 2.9E-31  228.5   5.3  163    2-237   124-290 (318)
167 3poz_A Epidermal growth factor  99.9 8.5E-27 2.9E-31  230.7   5.1  155    2-231   117-272 (327)
168 2i6l_A Mitogen-activated prote  99.9 3.2E-27 1.1E-31  231.3   2.0  186    2-239   120-314 (320)
169 3cek_A Dual specificity protei  99.9   1E-26 3.5E-31  228.1   5.4  165    2-239   127-301 (313)
170 2rio_A Serine/threonine-protei  99.9 5.2E-27 1.8E-31  241.6   3.1  168    3-236   116-301 (434)
171 3eqc_A Dual specificity mitoge  99.9 9.7E-27 3.3E-31  232.9   4.7  174    2-238   131-332 (360)
172 3a99_A Proto-oncogene serine/t  99.9 5.9E-27   2E-31  231.1   2.4  150    2-237   149-300 (320)
173 2clq_A Mitogen-activated prote  99.9 2.1E-26 7.1E-31  223.3   6.1  164    3-239   123-287 (295)
174 2wei_A Calmodulin-domain prote  99.9 1.3E-26 4.5E-31  224.6   4.5  160    2-238   121-284 (287)
175 2pml_X PFPK7, Ser/Thr protein   99.9 2.1E-26 7.1E-31  229.0   5.9  168    2-236   151-328 (348)
176 1mp8_A Focal adhesion kinase 1  99.9 1.3E-26 4.4E-31  223.9   4.2  153    2-230   116-269 (281)
177 3lzb_A Epidermal growth factor  99.9 2.7E-26 9.2E-31  227.3   5.0  154    2-230   117-271 (327)
178 4hcu_A Tyrosine-protein kinase  99.9 1.7E-26   6E-31  221.4   3.1  154    2-231   106-260 (269)
179 3vhe_A Vascular endothelial gr  99.9 2.1E-26 7.3E-31  229.9   3.6  155    2-231   193-349 (359)
180 3tt0_A Basic fibroblast growth  99.9   4E-26 1.4E-30  230.9   5.5  155    2-231   191-346 (382)
181 3sxs_A Cytoplasmic tyrosine-pr  99.9 2.5E-26 8.7E-31  220.0   3.6  154    2-231   104-258 (268)
182 4e5w_A Tyrosine-protein kinase  99.9 2.6E-26 8.8E-31  223.6   3.6  170    2-230   126-295 (302)
183 3p86_A Serine/threonine-protei  99.9 4.9E-26 1.7E-30  223.7   5.5  152    2-230   137-291 (309)
184 2ivs_A Proto-oncogene tyrosine  99.9 2.9E-26   1E-30  224.3   3.6  155    2-231   150-305 (314)
185 3gen_A Tyrosine-protein kinase  99.9 3.1E-26 1.1E-30  221.1   3.6  154    2-231   120-274 (283)
186 3lb7_A RAF proto-oncogene seri  99.9 5.6E-26 1.9E-30  223.0   5.4  166    2-236   132-299 (307)
187 1luf_A Muscle-specific tyrosin  99.9 5.4E-26 1.8E-30  225.4   5.2  154    2-230   174-328 (343)
188 4eqm_A Protein kinase; transfe  99.9 4.2E-26 1.4E-30  222.3   3.9  162    2-235   111-272 (294)
189 3cc6_A Protein tyrosine kinase  99.9 5.3E-26 1.8E-30  219.4   4.3  154    2-231   113-267 (281)
190 3kul_A Ephrin type-A receptor   99.9 5.6E-26 1.9E-30  224.8   3.9  155    2-230   151-306 (325)
191 3lxl_A Tyrosine-protein kinase  99.9 5.1E-26 1.7E-30  224.7   3.3  171    2-231   127-297 (327)
192 2iwi_A Serine/threonine-protei  99.9 5.4E-26 1.8E-30  222.7   3.4  151    2-238   139-291 (312)
193 3ugc_A Tyrosine-protein kinase  99.9 7.7E-26 2.6E-30  219.9   4.3  170    2-230   114-284 (295)
194 3pls_A Macrophage-stimulating   99.9 1.7E-25 5.8E-30  217.2   6.5  156    2-230   124-280 (298)
195 3f66_A Hepatocyte growth facto  99.9 1.2E-25 4.1E-30  218.7   5.3  157    2-230   128-284 (298)
196 1csn_A Casein kinase-1; phosph  99.9 3.6E-26 1.2E-30  222.0   1.6  162    2-230   106-276 (298)
197 1p4o_A Insulin-like growth fac  99.9 8.4E-26 2.9E-30  222.2   4.2  155    2-231   138-293 (322)
198 3c1x_A Hepatocyte growth facto  99.9 8.4E-26 2.9E-30  228.1   4.0  157    2-231   192-349 (373)
199 2a19_B Interferon-induced, dou  99.9 6.2E-26 2.1E-30  218.6   2.7  152    2-238   122-275 (284)
200 3brb_A Proto-oncogene tyrosine  99.9 1.1E-25 3.8E-30  220.6   4.5  155    2-231   147-302 (313)
201 1u59_A Tyrosine-protein kinase  99.9 7.5E-26 2.6E-30  219.2   3.1  158    2-233   110-268 (287)
202 2yfx_A Tyrosine-protein kinase  99.9 1.3E-25 4.4E-30  221.8   4.6  162    2-238   140-305 (327)
203 4euu_A Serine/threonine-protei  99.9 2.6E-25 8.8E-30  218.9   6.6  100    2-143   112-220 (319)
204 3cbl_A C-FES, proto-oncogene t  99.9 1.1E-25 3.9E-30  227.2   4.1  154    2-230   213-367 (377)
205 1fvr_A Tyrosine-protein kinase  99.9 8.9E-26   3E-30  223.0   2.9  152    2-231   142-294 (327)
206 1qcf_A Haematopoetic cell kina  99.9 1.2E-25 4.1E-30  232.7   3.9  153    2-230   284-437 (454)
207 1rjb_A FL cytokine receptor; k  99.9 1.1E-25 3.8E-30  223.5   3.2  157    2-233   172-330 (344)
208 3kfa_A Tyrosine-protein kinase  99.9 1.5E-25 5.2E-30  216.6   4.1  153    2-230   111-264 (288)
209 3uzp_A CKI-delta, CKID, casein  99.9 1.4E-25 4.7E-30  217.6   3.6  163    2-230   105-273 (296)
210 3t9t_A Tyrosine-protein kinase  99.9 1.2E-25 4.1E-30  214.8   3.1  154    2-231   104-258 (267)
211 3q4u_A Activin receptor type-1  99.9   1E-25 3.4E-30  219.1   2.5  174    2-230   105-295 (301)
212 2xir_A Vascular endothelial gr  99.9 1.4E-25 4.7E-30  219.7   3.1  155    2-231   148-304 (316)
213 1byg_A CSK, protein (C-termina  99.9   3E-25   1E-29  213.8   5.3  149    2-230   117-266 (278)
214 4hgt_A Casein kinase I isoform  99.9 2.4E-25   8E-30  215.8   4.0  163    2-230   105-273 (296)
215 2pvf_A Fibroblast growth facto  99.9   2E-25   7E-30  221.1   3.6  155    2-231   157-312 (334)
216 1qpc_A LCK kinase; alpha beta   99.9 2.4E-25 8.1E-30  214.5   3.9  153    2-230   109-262 (279)
217 2izr_A Casein kinase I isoform  99.9 1.1E-25 3.9E-30  222.6   1.6  162    2-230   105-274 (330)
218 1xbb_A Tyrosine-protein kinase  99.9 2.6E-25   9E-30  215.8   3.9  155    2-230   117-272 (291)
219 1fmk_A C-SRC, P60-SRC, tyrosin  99.9   3E-25   1E-29  229.7   4.5  153    2-230   280-433 (452)
220 3og7_A AKAP9-BRAF fusion prote  99.9 3.7E-25 1.2E-29  214.7   4.7  160    2-230   120-281 (289)
221 3lxp_A Non-receptor tyrosine-p  99.9   2E-25 6.7E-30  219.9   2.8  170    2-230   134-303 (318)
222 1k9a_A Carboxyl-terminal SRC k  99.9 3.2E-25 1.1E-29  229.3   4.4  149    2-230   289-438 (450)
223 1mqb_A Ephrin type-A receptor   99.9 6.2E-25 2.1E-29  217.9   6.0  156    2-231   147-303 (333)
224 3qa8_A MGC80376 protein; kinas  99.9 7.8E-25 2.7E-29  234.7   7.0  180    2-238   121-305 (676)
225 4fl3_A Tyrosine-protein kinase  99.9 5.9E-25   2E-29  236.7   5.8  155    2-230   469-624 (635)
226 1opk_A P150, C-ABL, proto-onco  99.9 3.5E-25 1.2E-29  231.8   3.7  152    3-230   319-471 (495)
227 1t46_A HOMO sapiens V-KIT hard  99.9 4.1E-25 1.4E-29  216.0   3.8  154    2-230   145-300 (313)
228 4fvq_A Tyrosine-protein kinase  99.9 4.3E-25 1.5E-29  213.5   3.9  149    2-231   113-269 (289)
229 3ll6_A Cyclin G-associated kin  99.9 3.7E-25 1.3E-29  218.2   3.3  167    2-233   136-304 (337)
230 3soc_A Activin receptor type-2  99.9 3.1E-25 1.1E-29  218.9   2.7  104    2-144   121-236 (322)
231 2qol_A Ephrin receptor; recept  99.9 4.7E-25 1.6E-29  222.5   3.9  155    2-230   147-302 (373)
232 3mdy_A Bone morphogenetic prot  99.9   7E-25 2.4E-29  216.6   4.9  172    2-231   134-325 (337)
233 3op5_A Serine/threonine-protei  99.9 1.8E-25   6E-30  224.5   0.5  106    2-144   152-259 (364)
234 3uim_A Brassinosteroid insensi  99.9 2.3E-25   8E-30  219.6   1.3  173    2-233   131-307 (326)
235 4f0f_A Serine/threonine-protei  99.9 1.4E-24 4.8E-29  209.9   6.5  151    2-230   122-282 (287)
236 2qkw_B Protein kinase; three-h  99.9 5.3E-25 1.8E-29  216.8   3.3  101    2-144   139-239 (321)
237 3s95_A LIMK-1, LIM domain kina  99.9 2.3E-25 7.8E-30  218.2   0.2  168    2-230   108-275 (310)
238 2i1m_A Macrophage colony-stimu  99.9   5E-25 1.7E-29  217.8   2.6  154    2-230   164-319 (333)
239 3dtc_A Mitogen-activated prote  99.9 9.4E-25 3.2E-29  209.2   4.2  151    2-231   105-267 (271)
240 3g2f_A Bone morphogenetic prot  99.9 6.8E-25 2.3E-29  217.0   3.3  109    2-143   111-232 (336)
241 2vuw_A Serine/threonine-protei  99.9 7.3E-25 2.5E-29  217.3   3.5  148    2-235   161-336 (336)
242 2ozo_A Tyrosine-protein kinase  99.9 1.2E-24   4E-29  233.5   5.2  160    2-235   436-599 (613)
243 2v62_A Serine/threonine-protei  99.9 4.6E-25 1.6E-29  219.8   1.8  169    2-230   151-321 (345)
244 3gxj_A TGF-beta receptor type-  99.9 2.1E-25 7.2E-30  216.9  -0.8  174    2-230   100-290 (303)
245 2h34_A Serine/threonine-protei  99.9 3.2E-24 1.1E-28  210.4   7.4  155    2-230   134-289 (309)
246 2eva_A TAK1 kinase - TAB1 chim  99.9 1.4E-24 4.6E-29  212.9   4.7  149    2-230   102-256 (307)
247 2h8h_A Proto-oncogene tyrosine  99.9   1E-24 3.6E-29  230.3   3.3  153    2-230   363-516 (535)
248 1u46_A ACK-1, activated CDC42   99.9 8.1E-25 2.8E-29  211.7   2.3  155    2-230   121-277 (291)
249 2jii_A Serine/threonine-protei  99.9 2.2E-24 7.6E-29  215.4   5.1  169    2-230   159-329 (352)
250 2w1i_A JAK2; chromosomal rearr  99.9 1.3E-24 4.5E-29  214.6   2.6  170    2-230   145-315 (326)
251 2j0j_A Focal adhesion kinase 1  99.9 1.9E-24 6.6E-29  233.5   3.9  153    2-230   491-644 (656)
252 2y4i_B KSR2, HKSR2, kinase sup  99.9   6E-24   2E-28  208.5   6.9  160    2-230   130-295 (319)
253 3kmu_A ILK, integrin-linked ki  99.9 3.8E-24 1.3E-28  204.4   5.1  150    2-230   111-263 (271)
254 3sv0_A Casein kinase I-like; t  99.9 4.6E-25 1.6E-29  230.0  -1.9  183    2-251   103-294 (483)
255 3e7e_A HBUB1, BUB1A, mitotic c  99.9 6.3E-25 2.2E-29  220.4  -1.9  101    2-144   172-283 (365)
256 2wqm_A Serine/threonine-protei  99.9 4.6E-24 1.6E-28  208.8   4.3  153    2-230   136-290 (310)
257 2buj_A Serine/threonine-protei  99.9 3.2E-24 1.1E-28  210.4   2.1  167    2-231   134-300 (317)
258 3m2w_A MAP kinase-activated pr  99.9 6.6E-24 2.3E-28  207.0   3.7  143    2-239   117-265 (299)
259 2nru_A Interleukin-1 receptor-  99.9 2.7E-24 9.2E-29  210.0   0.7  100    2-144   133-232 (307)
260 1b6c_B TGF-B superfamily recep  99.9 5.9E-24   2E-28  210.6   2.1  175    2-231   139-330 (342)
261 4eut_A Serine/threonine-protei  99.9 1.4E-23 4.7E-28  213.3   4.0  101    2-144   112-221 (396)
262 3a32_A Probable threonyl-tRNA   99.9 2.5E-22 8.4E-27  208.4  13.1  142  309-452    46-210 (471)
263 2i4l_A Proline-tRNA ligase; al  99.9 1.6E-22 5.4E-27  209.2   8.4  155  290-453    52-221 (458)
264 1nyr_A Threonyl-tRNA synthetas  99.8 8.8E-22   3E-26  211.8   9.7  143  309-452   268-426 (645)
265 1evl_A Threonyl-tRNA synthetas  99.8 7.9E-21 2.7E-25  193.5  12.2  152  290-451    15-182 (401)
266 2pzi_A Probable serine/threoni  99.8 1.2E-22   4E-27  220.6  -2.0  144    2-235   182-325 (681)
267 2j3l_A Prolyl-tRNA synthetase;  99.8   7E-21 2.4E-25  202.4  11.6  153  291-452    33-200 (572)
268 4azs_A Methyltransferase WBDD;  99.8 5.6E-22 1.9E-26  210.7   2.9   97    4-145   341-437 (569)
269 1hc7_A Prolyl-tRNA synthetase;  99.8 2.4E-20 8.3E-25  193.1  13.6  151  292-451    31-201 (477)
270 1nj8_A Proline-tRNA synthetase  99.8   6E-20 2.1E-24  189.5  12.6  163  279-450     8-195 (459)
271 1qf6_A THRRS, threonyl-tRNA sy  99.8 1.6E-18 5.5E-23  185.7  12.3  161  281-451   243-423 (642)
272 3uh0_A Threonyl-tRNA synthetas  99.7 7.6E-18 2.6E-22  173.5  11.9  141  309-451    61-229 (460)
273 3uqc_A Probable conserved tran  99.7 6.4E-19 2.2E-23  171.1   2.4   45    3-47    130-174 (286)
274 1nj1_A PROR, proline-tRNA synt  99.7 1.7E-17 5.8E-22  172.8  13.2  162  280-451    42-228 (501)
275 3ial_A Prolyl-tRNA synthetase;  99.6 1.4E-15 4.8E-20  157.6  11.6  156  279-442    25-205 (518)
276 3dsq_A Pyrrolysyl-tRNA synthet  99.6   5E-15 1.7E-19  143.3   9.7  133  314-447    72-210 (288)
277 4hvc_A Bifunctional glutamate/  99.6 1.7E-14 5.7E-19  149.9  13.2  159  279-446    32-214 (519)
278 2zt5_A Glycyl-tRNA synthetase;  99.5 7.3E-15 2.5E-19  157.8   9.8  146  295-448    91-375 (693)
279 2dq3_A Seryl-tRNA synthetase;   99.5 7.3E-15 2.5E-19  149.6   7.3  137  309-449   169-323 (425)
280 1ati_A Glycyl-tRNA synthetase;  99.5 3.9E-14 1.3E-18  147.6  11.0  146  295-448    29-276 (505)
281 3en9_A Glycoprotease, O-sialog  99.5   9E-16 3.1E-20  161.9  -2.2   92    4-118   433-524 (540)
282 3qtc_A Pyrrolysyl-tRNA synthet  99.4   1E-12 3.4E-17  127.6  13.7  125  315-447    79-213 (290)
283 1ses_A Seryl-tRNA synthetase;   99.3 5.7E-13 1.9E-17  135.4   6.4  133  309-445   163-314 (421)
284 2dq0_A Seryl-tRNA synthetase;   99.3 1.5E-12 5.1E-17  133.4   9.1  136  309-448   190-342 (455)
285 1zar_A RIO2 kinase; serine kin  99.3 2.5E-13 8.4E-18  131.5   3.1   48    2-50    193-240 (282)
286 1nnh_A Asparaginyl-tRNA synthe  99.2 6.3E-11 2.2E-15  114.9  12.7  122  309-440    12-141 (294)
287 2cja_A Seryl-tRNA synthetase;   99.2 1.2E-11 3.9E-16  128.1   5.9  131  309-442   228-407 (522)
288 1zth_A RIO1 serine protein kin  99.1 7.7E-11 2.6E-15  112.2   5.0   48    3-52    171-219 (258)
289 1x54_A Asparaginyl-tRNA synthe  99.1 4.9E-10 1.7E-14  114.2  11.2  115  310-439   133-250 (434)
290 1wyd_A Hypothetical aspartyl-t  99.0   2E-09   7E-14  109.4  12.5  114  310-438   132-248 (429)
291 1n9w_A Aspartyl-tRNA synthetas  99.0 3.7E-10 1.3E-14  114.6   6.8  116  310-439   123-241 (422)
292 3vbb_A Seryl-tRNA synthetase,   98.9 3.5E-09 1.2E-13  109.0  10.4  137  309-446   198-361 (522)
293 1eov_A ASPRS, aspartyl-tRNA sy  98.9 1.2E-08 4.2E-13  105.3  13.3  101  310-419   176-280 (487)
294 1wle_A Seryl-tRNA synthetase;   98.9   3E-09   1E-13  109.7   8.2  137  309-446   216-371 (501)
295 3a74_A Lysyl-tRNA synthetase;   98.8 6.1E-08 2.1E-12  100.1  13.7  118  310-438   172-290 (493)
296 3qne_A Seryl-tRNA synthetase,   98.7 2.7E-08 9.1E-13  101.7   9.7  136  309-446   182-336 (485)
297 3lss_A Seryl-tRNA synthetase;   98.7   5E-08 1.7E-12   99.8  11.2  136  309-446   205-359 (484)
298 4gyi_A RIO2 kinase; protein ki  98.6 1.3E-08 4.6E-13  102.1   4.4   49    2-50    205-263 (397)
299 1e1o_A Lysyl-tRNA synthetase,   98.6 4.4E-07 1.5E-11   93.9  13.7  118  310-438   181-299 (504)
300 3err_A Fusion protein of micro  98.5 2.3E-07 7.7E-12   96.7   9.9  134  309-446   272-424 (536)
301 3a5y_A GENX, putative lysyl-tR  98.5 8.5E-07 2.9E-11   87.5  12.8  119  309-437    33-156 (345)
302 1b7y_A Phers, protein (phenyla  98.5   2E-06 6.8E-11   84.9  14.5  123  314-441   102-247 (350)
303 3l4g_A Phenylalanyl-tRNA synth  98.4 1.3E-06 4.3E-11   89.8  12.1  135  310-447   222-406 (508)
304 2du3_A O-phosphoseryl-tRNA syn  98.4 1.1E-06 3.6E-11   90.8  10.2   83  362-447   180-265 (534)
305 2xgt_A Asparaginyl-tRNA synthe  98.3 2.9E-06 9.8E-11   86.5  12.8  102  310-419   130-232 (435)
306 3nem_A Aspartyl-tRNA synthetas  98.2 7.1E-06 2.4E-10   83.4  12.5  103  310-419   135-238 (438)
307 2rhq_A Phenylalanyl-tRNA synth  98.0 4.3E-05 1.5E-09   73.8  12.6  121  314-441    54-186 (294)
308 2du7_A O-phosphoseryl-tRNA syn  98.0 1.8E-05 6.1E-10   81.6  10.3   82  362-446   192-276 (549)
309 3mf2_A BLL0957 protein; aminoa  98.0   2E-05   7E-10   76.6   9.6  134  313-448    65-232 (346)
310 3m4p_A Ehasnrs, asparaginyl-tR  98.0 3.3E-05 1.1E-09   78.9  11.3  102  310-419   154-256 (456)
311 1g5h_A Mitochondrial DNA polym  97.9 1.3E-05 4.4E-10   82.1   7.6  138  309-447    59-232 (454)
312 3bju_A Lysyl-tRNA synthetase;   97.9 8.1E-05 2.8E-09   77.3  13.6  104  310-419   174-278 (521)
313 4ex5_A Lysine--tRNA ligase; st  97.9 8.8E-05   3E-09   76.8  13.5  104  310-419   202-306 (529)
314 1c0a_A Aspartyl tRNA synthetas  97.9 8.1E-05 2.8E-09   78.4  13.4  103  310-419   136-240 (585)
315 1l0w_A Aspartyl-tRNA synthetas  97.9 8.2E-05 2.8E-09   78.2  12.8  103  310-419   142-246 (580)
316 3pco_A Phenylalanyl-tRNA synth  97.8 5.1E-05 1.8E-09   73.9   9.0  117  313-439   107-234 (327)
317 4ah6_A Aspartate--tRNA ligase,  97.7 0.00035 1.2E-08   73.5  14.7  118  310-439   146-265 (617)
318 3i7f_A Aspartyl-tRNA synthetas  97.7 0.00014 4.9E-09   75.4  10.9  101  310-417   242-344 (548)
319 2odr_B Phosphoseryl-tRNA synth  97.7 0.00039 1.3E-08   72.4  13.2   83  362-447   199-284 (648)
320 2odr_A Phosphoseryl-tRNA synth  97.6 0.00041 1.4E-08   72.3  13.2   83  362-447   199-284 (665)
321 2odr_D Phosphoseryl-tRNA synth  97.6 0.00042 1.4E-08   72.3  13.2   83  362-447   199-284 (685)
322 2odr_C Phosphoseryl-tRNA synth  97.6 0.00046 1.6E-08   72.2  13.0   83  362-447   199-284 (701)
323 3ica_A Phenylalanyl-tRNA synth  97.5 0.00092 3.1E-08   61.3  12.3  133  315-447     6-161 (213)
324 3ig2_A Phenylalanyl-tRNA synth  97.5 0.00085 2.9E-08   61.5  11.7  133  315-447     6-161 (213)
325 3l4g_B Phenylalanyl-tRNA synth  97.4 0.00074 2.5E-08   71.4  12.0  124  315-442   393-525 (589)
326 3ikl_A DNA polymerase subunit   97.4 0.00049 1.7E-08   69.9   9.2  124  309-443   101-238 (459)
327 1nd4_A Aminoglycoside 3'-phosp  97.3 0.00011 3.9E-09   68.3   3.5   28   23-50    186-213 (264)
328 3tm0_A Aminoglycoside 3'-phosp  97.2 0.00018   6E-09   67.5   4.2   30   21-50    183-212 (263)
329 3dxp_A Putative acyl-COA dehyd  97.1  0.0004 1.4E-08   68.5   4.8   31   21-51    216-248 (359)
330 2rhq_B Phenylalanyl-tRNA synth  96.9  0.0033 1.1E-07   68.6  10.4  131  314-446   494-638 (795)
331 1b7y_B Phers, protein (phenyla  96.2    0.02 6.9E-07   62.2  11.1  124  315-447   491-627 (785)
332 2q83_A YTAA protein; 2635576,   96.0  0.0053 1.8E-07   59.3   5.2   30   21-50    222-251 (346)
333 3sg8_A APH(2'')-ID; antibiotic  95.8  0.0061 2.1E-07   58.4   4.3   30   22-51    192-223 (304)
334 3r70_A Aminoglycoside phosphot  95.2   0.017 5.9E-07   55.7   5.1   29   23-51    209-237 (320)
335 2pyw_A Uncharacterized protein  94.8   0.014 4.9E-07   58.6   3.6   32   19-51    230-261 (420)
336 3cmq_A Phenylalanyl-tRNA synth  94.8    0.03   1E-06   56.3   5.8   93  315-415    50-163 (415)
337 3pco_B Phenylalanyl-tRNA synth  94.1    0.13 4.3E-06   56.1   9.0  129  319-447   495-637 (795)
338 2ppq_A HSK, HK, homoserine kin  92.6   0.047 1.6E-06   52.4   2.4   30   21-50    187-216 (322)
339 1zyl_A Hypothetical protein YI  92.6   0.068 2.3E-06   51.4   3.5   28   21-50    195-222 (328)
340 3tdw_A Gentamicin resistance p  92.3   0.063 2.2E-06   51.5   2.9   31   21-51    190-224 (306)
341 3csv_A Aminoglycoside phosphot  92.3   0.046 1.6E-06   52.9   1.8   30   21-50    183-216 (333)
342 3ats_A Putative uncharacterize  91.8   0.058   2E-06   52.6   2.0   30   21-50    222-251 (357)
343 4gkh_A Aminoglycoside 3'-phosp  90.6   0.088   3E-06   48.9   1.9   28   23-50    195-222 (272)
344 3c5i_A Choline kinase; choline  90.4     0.2 6.9E-06   49.1   4.3   29   21-50    212-240 (369)
345 3ovc_A Hygromycin-B 4-O-kinase  89.7    0.11 3.7E-06   51.2   1.8   30   22-51    214-243 (362)
346 3i1a_A Spectinomycin phosphotr  89.2    0.17 5.7E-06   49.3   2.6   31   21-51    206-236 (339)
347 2olc_A MTR kinase, methylthior  88.6    0.25 8.7E-06   48.8   3.6   30   20-50    226-255 (397)
348 2qg7_A Ethanolamine kinase PV0  86.8    0.25 8.6E-06   50.3   2.3   15   22-36    291-305 (458)
349 1nw1_A Choline kinase (49.2 KD  86.2    0.24 8.3E-06   49.9   1.8   29   22-50    250-306 (429)
350 3f2s_A CK, chetk-alpha, cholin  86.1    0.19 6.4E-06   50.3   0.8   29   22-50    245-279 (401)
351 3dxq_A Choline/ethanolamine ki  85.6     0.3   1E-05   46.3   2.0   28   22-50    174-201 (301)
352 2yle_A Protein spire homolog 1  83.4     1.1 3.6E-05   40.9   4.4   44    2-45     49-93  (229)
353 3feg_A Choline/ethanolamine ki  83.4    0.48 1.6E-05   47.0   2.4   29   22-50    221-253 (379)
354 3d1u_A Putative fructosamine-3  82.7    0.62 2.1E-05   44.1   2.8   28   21-50    188-215 (288)
355 3g15_A CK, chetk-alpha, cholin  80.7    0.63 2.1E-05   46.3   2.1   29   22-50    245-279 (401)
356 3mes_A Choline kinase; malaria  75.7     1.1 3.6E-05   45.2   2.0   28   22-50    263-290 (424)
357 3jr1_A Putative fructosamine-3  62.0     2.8 9.5E-05   40.1   1.7   26   21-47    207-232 (312)
358 3f7w_A Putative fructosamine-3  61.4     2.8 9.6E-05   39.1   1.5   24   22-46    189-212 (288)
359 2jvf_A De novo protein M7; tet  37.0      21 0.00071   25.8   2.4   31  421-451    58-88  (96)
360 12as_A Asparagine synthetase;   35.5 2.9E+02    0.01   26.1  13.5  119  314-436     7-144 (330)
361 2x6h_A GH13170P, VPS34, phosph  28.2      28 0.00097   36.9   2.8   25   26-50    551-575 (696)
362 4ano_A ESSB; membrane protein,  23.4      78  0.0027   28.4   4.4   45    4-49     87-131 (219)
363 3ls8_A Phosphatidylinositol 3-  20.2      51  0.0017   34.4   2.8   25   26-50    477-501 (614)

No 1  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=9.4e-38  Score=310.97  Aligned_cols=163  Identities=24%  Similarity=0.400  Sum_probs=131.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ++++.+++||+.||+|||++|||||||||+|||++.+|++||+|||+|+.+.                         ...
T Consensus       170 ~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~-------------------------~~~  224 (346)
T 4fih_A          170 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-------------------------KEV  224 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECC-------------------------SSS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecC-------------------------CCC
Confidence            4689999999999999999999999999999999999999999999998653                         122


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ...++.+||+.|||||++.   +..|+.++  ||||+              ||++|||++|++               ||
T Consensus       225 ~~~~~~~GTp~YmAPEvl~---~~~y~~~~--DiWSl--------------Gvilyeml~G~~---------------PF  270 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELIS---RLPYGPEV--DIWSL--------------GIMVIEMVDGEP---------------PY  270 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             CcccccccCcCcCCHHHHC---CCCCCcHH--HHHHH--------------HHHHHHHHHCCC---------------CC
Confidence            3456689999999999998   67899999  99999              999999877654               45


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      .+.+..+.+..+.....+.++..           ...++++.+||     .+||+.||++|||++|+|+||||.+...
T Consensus       271 ~~~~~~~~~~~i~~~~~~~~~~~-----------~~~s~~~~dli-----~~~L~~dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          271 FNEPPLKAMKMIRDNLPPRLKNL-----------HKVSPSLKGFL-----DRLLVRDPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             TTSCHHHHHHHHHHSSCCCCSCG-----------GGSCHHHHHHH-----HHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCcCHHHHHHHHHcCCCCCCCcc-----------ccCCHHHHHHH-----HHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence            55554555555543333332222           12347788999     9999999999999999999999997654


No 2  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=1.3e-37  Score=305.52  Aligned_cols=168  Identities=27%  Similarity=0.332  Sum_probs=135.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.+++||+.||+|||++|||||||||+|||++.++++||+|||+|+.+...                       ...
T Consensus       132 ~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~-----------------------~~~  188 (311)
T 4aw0_A          132 TCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-----------------------SKQ  188 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT-----------------------TTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC-----------------------CCc
Confidence            368899999999999999999999999999999999999999999999865321                       122


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ....+.+||+.|||||++.   +..|+.++  ||||+              ||++|||++|++               ||
T Consensus       189 ~~~~~~~GTp~YmAPEvl~---~~~y~~~~--DiWSl--------------Gvilyeml~G~~---------------PF  234 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLT---EKSACKSS--DLWAL--------------GCIIYQLVAGLP---------------PF  234 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHH---HSCBCHHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             ccccCcccCcccCCHHHHc---CCCCCcHH--HHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            3455679999999999998   77899999  99999              999999877654               55


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhh------hcCcccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQN------LCQPISL  235 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~------l~hp~f~  235 (454)
                      .+.+....+.++... ...+|+..             ++++.+||     ++||+.||++|||++|+      ++||||.
T Consensus       235 ~~~~~~~~~~~i~~~-~~~~p~~~-------------s~~~~dli-----~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~  295 (311)
T 4aw0_A          235 RAGNEGLIFAKIIKL-EYDFPEKF-------------FPKARDLV-----EKLLVLDATKRLGCEEMEGYGPLKAHPFFE  295 (311)
T ss_dssp             CCSSHHHHHHHHHHT-CCCCCTTC-------------CHHHHHHH-----HHHSCSSGGGSTTSGGGTCHHHHHTSGGGT
T ss_pred             CCCCHHHHHHHHHcC-CCCCCccc-------------CHHHHHHH-----HHHccCCHhHCcChHHHcCCHHHHCCCCcC
Confidence            555555555555533 34455442             37788999     99999999999999985      7889986


Q ss_pred             cCCCCCCCccCccccccC
Q psy7309         236 EGSSSGLSVLGSEQLLTC  253 (454)
Q Consensus       236 ~~~~~~~~~~~~~~ll~~  253 (454)
                      .        ++|+++.+.
T Consensus       296 ~--------idw~~l~~~  305 (311)
T 4aw0_A          296 S--------VTWENLHQQ  305 (311)
T ss_dssp             T--------CCCTTGGGS
T ss_pred             C--------CCHHHhcCC
Confidence            3        678887654


No 3  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.3e-37  Score=305.10  Aligned_cols=171  Identities=27%  Similarity=0.410  Sum_probs=136.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.+++||+.||+|||++|||||||||+|||++.+|++||+|||+|+....                         ..
T Consensus       126 ~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~-------------------------~~  180 (304)
T 3ubd_A          126 EDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID-------------------------HE  180 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccC-------------------------CC
Confidence            46889999999999999999999999999999999999999999999985431                         22


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ....+.+||+.|||||++.   +..|+.++  ||||+              ||++|||++|++               ||
T Consensus       181 ~~~~~~~GT~~YmAPE~~~---~~~y~~~~--DiwSl--------------GvilyemltG~~---------------PF  226 (304)
T 3ubd_A          181 KKAYSFCGTVEYMAPEVVN---RRGHTQSA--DWWSF--------------GVLMFEMLTGTL---------------PF  226 (304)
T ss_dssp             CCCCSCCCCGGGCCHHHHH---TSCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             ccccccccCcccCCHHHhc---cCCCCCCC--cccch--------------HHHHHHHHhCCC---------------CC
Confidence            3445679999999999998   67899998  99999              999999877654               55


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~  236 (454)
                      .+.+....+.++.+. ...+|...             ++++.+||     ++||+.||++||||     +|+++||||+.
T Consensus       227 ~~~~~~~~~~~i~~~-~~~~p~~~-------------s~~~~~li-----~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          227 QGKDRKETMTMILKA-KLGMPQFL-------------SPEAQSLL-----RMLFKRNPANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             CCSSHHHHHHHHHHC-CCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred             CCcCHHHHHHHHHcC-CCCCCCcC-------------CHHHHHHH-----HHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence            555555555555533 33445442             37788999     99999999999995     79999999974


Q ss_pred             CCCCCCCccCccccccCCCCCC
Q psy7309         237 GSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       237 ~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                              ++|+.+.+....||
T Consensus       288 --------idw~~l~~~~~~pP  301 (304)
T 3ubd_A          288 --------IDWNKLYRREIHPP  301 (304)
T ss_dssp             --------CCHHHHHTTCSCCS
T ss_pred             --------CCHHHHHhCCCCcC
Confidence                    57878776655554


No 4  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=2.5e-37  Score=299.14  Aligned_cols=158  Identities=26%  Similarity=0.320  Sum_probs=119.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ++++.+++||+.||+|||++||+||||||+|||++.++++||+|||+|+....                          .
T Consensus       112 ~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--------------------------~  165 (275)
T 3hyh_A          112 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--------------------------G  165 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC--------------------------C
Confidence            46899999999999999999999999999999999999999999999985421                          2


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ...++.+||+.|||||++.   +..| +.++  ||||+              ||++|||++|++               |
T Consensus       166 ~~~~~~~GT~~Y~APE~~~---~~~y~~~~~--DiwSl--------------Gvily~lltg~~---------------P  211 (275)
T 3hyh_A          166 NFLKTSCGSPNYAAPEVIS---GKLYAGPEV--DVWSC--------------GVILYVMLCRRL---------------P  211 (275)
T ss_dssp             ---------CTTSCHHHHS---SSSCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             CccCCeeECcccCChhhhc---CCCCCCChh--hhHHH--------------HHHHHHHHHCCC---------------C
Confidence            2344579999999999998   5555 5678  99999              999999877654               5


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      |.+.+....+..+... ...+|...             ++++.+||     ++||+.||++|||++|+++||||+...
T Consensus       212 F~~~~~~~~~~~i~~~-~~~~p~~~-------------s~~~~~li-----~~~L~~dP~~R~s~~eil~hpw~k~~~  270 (275)
T 3hyh_A          212 FDDESIPVLFKNISNG-VYTLPKFL-------------SPGAAGLI-----KRMLIVNPLNRISIHEIMQDDWFKVDL  270 (275)
T ss_dssp             SCCSSHHHHHHHHHHT-CCCCCTTS-------------CHHHHHHH-----HHHSCSSGGGSCCHHHHHHCHHHHTTC
T ss_pred             CCCCCHHHHHHHHHcC-CCCCCCCC-------------CHHHHHHH-----HHHccCChhHCcCHHHHHcCcccccCC
Confidence            5555555555555433 34445442             37788899     999999999999999999999998643


No 5  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=9.5e-37  Score=311.07  Aligned_cols=163  Identities=24%  Similarity=0.400  Sum_probs=131.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ++++.+++||+.||+|||++|||||||||+|||++.+|++||+|||+|+.+.                         ...
T Consensus       247 ~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~-------------------------~~~  301 (423)
T 4fie_A          247 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-------------------------KEV  301 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECC-------------------------SSC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECC-------------------------CCC
Confidence            4689999999999999999999999999999999999999999999998653                         123


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ...++.+||+.|||||++.   +..|+.++  ||||+              ||++|||++|++               ||
T Consensus       302 ~~~~~~~GTp~YmAPEvl~---~~~y~~~~--DiWSl--------------Gvilyeml~G~~---------------PF  347 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELIS---RLPYGPEV--DIWSL--------------GIMVIEMVDGEP---------------PY  347 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             ccccccccCcCcCCHHHHC---CCCCCcHH--HHHHH--------------HHHHHHHHHCCC---------------CC
Confidence            3456789999999999998   67899999  99999              999999877654               44


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      .+.+....+..+.....+.++..           ...++++.+||     .+||+.||++||||+|+|+||||.+...
T Consensus       348 ~~~~~~~~~~~i~~~~~~~~~~~-----------~~~s~~~~dli-----~~~L~~dP~~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          348 FNEPPLKAMKMIRDNLPPRLKNL-----------HKVSPSLKGFL-----DRLLVRDPAQRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             TTSCHHHHHHHHHHSCCCCCSCT-----------TSSCHHHHHHH-----HHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCcCHHHHHHHHHcCCCCCCccc-----------ccCCHHHHHHH-----HHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence            44444444554443333332222           12347788899     9999999999999999999999997543


No 6  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=3.1e-37  Score=307.72  Aligned_cols=160  Identities=22%  Similarity=0.323  Sum_probs=130.5

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      +++.|++||+.||+|||++|||||||||+|||++.+|++||+|||+|+.+...                         ..
T Consensus       126 ~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-------------------------~~  180 (350)
T 4b9d_A          126 QILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-------------------------VE  180 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-------------------------HH
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-------------------------cc
Confidence            58899999999999999999999999999999999999999999999854321                         11


Q ss_pred             CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309          83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST  162 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~  162 (454)
                      ..+..+||+.|||||++.   +..|+.++  ||||+              ||++|||++|++               ||.
T Consensus       181 ~~~~~~GT~~YmAPE~l~---~~~y~~~~--DiwSl--------------GvilyemltG~~---------------PF~  226 (350)
T 4b9d_A          181 LARACIGTPYYLSPEICE---NKPYNNKS--DIWAL--------------GCVLYELCTLKH---------------AFE  226 (350)
T ss_dssp             HHHHHHSCCTTCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSSC---------------SCC
T ss_pred             cccccCCCccccCHHHHC---CCCCCcHH--HHHHH--------------HHHHHHHHHCCC---------------CCC
Confidence            234568999999999998   67899999  99999              999999877654               566


Q ss_pred             CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +.+....+.++.....+.++..             .++++.+||     .+||+.||++|||++|+|+||||.....
T Consensus       227 ~~~~~~~~~~i~~~~~~~~~~~-------------~s~~~~~li-----~~~L~~dP~~R~s~~e~l~hp~~~~~~~  285 (350)
T 4b9d_A          227 AGSMKNLVLKIISGSFPPVSLH-------------YSYDLRSLV-----SQLFKRNPRDRPSVNSILEKGFIAKRIE  285 (350)
T ss_dssp             CSSHHHHHHHHHHTCCCCCCTT-------------SCHHHHHHH-----HHHTCSSGGGSCCHHHHHTSHHHHTTGG
T ss_pred             CcCHHHHHHHHHcCCCCCCCcc-------------CCHHHHHHH-----HHHccCChhHCcCHHHHhcCHHhhcCCC
Confidence            6666666666554444333332             237788899     9999999999999999999999986443


No 7  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=6.4e-36  Score=291.54  Aligned_cols=156  Identities=26%  Similarity=0.344  Sum_probs=119.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.+++||+.||+|||++|  ||||||||+|||++. +|.+||+|||+|+...                         
T Consensus       129 ~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~-------------------------  183 (290)
T 3fpq_A          129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR-------------------------  183 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC-------------------------
Confidence            467899999999999999998  999999999999985 7899999999997421                         


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        ....++.+||+.|||||++.    ..|+.++  ||||+              ||++|||++|++              
T Consensus       184 --~~~~~~~~GTp~YmAPE~~~----~~y~~~~--DiwSl--------------Gvilyelltg~~--------------  227 (290)
T 3fpq_A          184 --ASFAKAVIGTPEFMAPEMYE----EKYDESV--DVYAF--------------GMCMLEMATSEY--------------  227 (290)
T ss_dssp             --TTSBEESCSSCCCCCGGGGG----TCCCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --CCccCCcccCccccCHHHcC----CCCCcHH--HHHHH--------------HHHHHHHHHCCC--------------
Confidence              12344579999999999876    3599998  99999              999999877654              


Q ss_pred             CCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         159 GPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       159 ~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                       |+.+.. .......+.....   |...+         ...++++.+||     .+||+.||++|||++|+|+||||++
T Consensus       228 -Pf~~~~~~~~~~~~i~~~~~---~~~~~---------~~~~~~~~~li-----~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          228 -PYSECQNAAQIYRRVTSGVK---PASFD---------KVAIPEVKEII-----EGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -TTTTCSSHHHHHHHHTTTCC---CGGGG---------GCCCHHHHHHH-----HHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -CCCCCCcHHHHHHHHHcCCC---CCCCC---------ccCCHHHHHHH-----HHHccCChhHCcCHHHHhcCccccC
Confidence             333322 2223333332221   11110         12336778888     9999999999999999999999985


No 8  
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.5e-35  Score=301.65  Aligned_cols=188  Identities=27%  Similarity=0.384  Sum_probs=130.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.+++||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.+.....                     ...
T Consensus       158 ~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~---------------------~~~  216 (398)
T 4b99_A          158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA---------------------EHQ  216 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----------------------------C
T ss_pred             HHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCcc---------------------ccc
Confidence            46899999999999999999999999999999999999999999999986532110                     123


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      ...++.+||+.|||||++..  ...|+.++  ||||+              ||++|||++|++.     ..+.+..++..
T Consensus       217 ~~~~~~~GT~~Y~APEv~~~--~~~~~~~~--DiWSl--------------G~il~ell~G~~pF~g~~~~~~l~~I~~~  278 (398)
T 4b99_A          217 YFMTEYVATRWYRAPELMLS--LHEYTQAI--DLWSV--------------GCIFGEMLARRQLFPGKNYVHQLQLIMMV  278 (398)
T ss_dssp             CCCCSSCCCCTTCCHHHHTT--CSCCCTHH--HHHHH--------------HHHHHHHHHTSCSSCCSSHHHHHHHHHHH
T ss_pred             cccccceeChHhcCHHHhcC--CCCCCChh--heehh--------------HHHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence            34567899999999999871  34578889  99999              9999998876652     33444444443


Q ss_pred             cCCCCCCchh---hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309         157 ENGPSTGSNV---QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI  233 (454)
Q Consensus       157 ~~~p~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~  233 (454)
                      .+.|......   ......+...    +|... ...|+.+.+. .++++.+||     .+||+.||++||||+|+|+|||
T Consensus       279 ~g~p~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~-~s~~~~dLl-----~~mL~~dP~~R~ta~e~L~Hp~  347 (398)
T 4b99_A          279 LGTPSPAVIQAVGAERVRAYIQS----LPPRQ-PVPWETVYPG-ADRQALSLL-----GRMLRFEPSARISAAAALRHPF  347 (398)
T ss_dssp             HCCCCGGGTC-----CHHHHHHS----SCCCC-CCCHHHHSTT-CCHHHHHHH-----HHHSCSSTTTSCCHHHHTTSGG
T ss_pred             cCCCChHHhhhhhhhhhhhhhhc----CCCcC-CCCHHHhCCC-CCHHHHHHH-----HHHCcCChhHCcCHHHHhcCHh
Confidence            4444322110   0001111101    11111 1234443333 247778888     9999999999999999999999


Q ss_pred             cccCCC
Q psy7309         234 SLEGSS  239 (454)
Q Consensus       234 f~~~~~  239 (454)
                      |.+...
T Consensus       348 f~~~~~  353 (398)
T 4b99_A          348 LAKYHD  353 (398)
T ss_dssp             GTTTCC
T ss_pred             hCcCCC
Confidence            997543


No 9  
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.7e-35  Score=288.78  Aligned_cols=167  Identities=28%  Similarity=0.441  Sum_probs=110.3

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      .++++++||++||+|||++|||||||||+|||++.++.+||+|||+|+...........             ........
T Consensus       119 ~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~-------------~~~~~~~~  185 (299)
T 4g31_A          119 VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV-------------LTPMPAYA  185 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCcccccc-------------cccccccc
Confidence            37889999999999999999999999999999999999999999999876432110000             00001223


Q ss_pred             CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309          83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST  162 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~  162 (454)
                      ..++.+||+.|||||++.   +..|+.++  ||||+              ||++|||+.......+..            
T Consensus       186 ~~~~~~GT~~YmAPE~~~---~~~y~~~~--DiwSl--------------Gvilyell~Pf~~~~~~~------------  234 (299)
T 4g31_A          186 RHTGQVGTKLYMSPEQIH---GNSYSHKV--DIFSL--------------GLILFELLYPFSTQMERV------------  234 (299)
T ss_dssp             ------CCCTTSCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHSCCSSHHHHH------------
T ss_pred             ccCCcccCccccCHHHHc---CCCCCCHH--HHHHH--------------HHHHHHHccCCCCccHHH------------
Confidence            456679999999999998   67899999  99999              999999654111111111            


Q ss_pred             CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                           ..+..+.   ...+|...+          ..++...+||     ++||+.||++|||+.|+|+||||..
T Consensus       235 -----~~~~~~~---~~~~p~~~~----------~~~~~~~~li-----~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          235 -----RTLTDVR---NLKFPPLFT----------QKYPCEYVMV-----QDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             -----HHHHHHH---TTCCCHHHH----------HHCHHHHHHH-----HHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             -----HHHHHHh---cCCCCCCCc----------ccCHHHHHHH-----HHHcCCChhHCcCHHHHhcCHhhCC
Confidence                 1111111   112222211          1125556788     9999999999999999999999985


No 10 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=4.6e-35  Score=290.63  Aligned_cols=168  Identities=23%  Similarity=0.243  Sum_probs=123.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ++++.+++||+.||+|||++|||||||||+|||++.+| ++||+|||+|+.+......                    ..
T Consensus       150 ~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~--------------------~~  209 (336)
T 4g3f_A          150 DRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG--------------------KS  209 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc--------------------cc
Confidence            46889999999999999999999999999999999887 6999999999865321100                    01


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+||+.|||||++.   +..|+.++  ||||+              ||++|||++|++               |
T Consensus       210 ~~~~~~~~GT~~YmAPE~~~---~~~y~~~~--DiwSl--------------GvilyemltG~~---------------P  255 (336)
T 4g3f_A          210 LLTGDYIPGTETHMAPEVVM---GKPCDAKV--DIWSS--------------CCMMLHMLNGCH---------------P  255 (336)
T ss_dssp             ----CCCCCCGGGCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             eecCCccccCccccCHHHHC---CCCCCcHH--HHHHH--------------HHHHHHHHHCcC---------------C
Confidence            11234468999999999998   67899999  99999              999999877654               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhh------------
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQN------------  228 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~------------  228 (454)
                      |.+.+....+.++.....+ ++...          ...++.+.+||     .+||+.||++||||.|+            
T Consensus       256 f~~~~~~~~~~~i~~~~~~-~~~~~----------~~~s~~~~~li-----~~~L~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          256 WTQYFRGPLCLKIASEPPP-IREIP----------PSCAPLTAQAI-----QEGLRKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             STTTCCSCCHHHHHHSCCG-GGGSC----------TTSCHHHHHHH-----HHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCHHHHHHHHHcCCCC-chhcC----------ccCCHHHHHHH-----HHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence            4443333334444333221 11111          12237778888     99999999999999996            


Q ss_pred             -hcCcccccCCC
Q psy7309         229 -LCQPISLEGSS  239 (454)
Q Consensus       229 -l~hp~f~~~~~  239 (454)
                       |+|||+.+...
T Consensus       320 ~l~hPw~~~~~~  331 (336)
T 4g3f_A          320 GLKSPWKGEYKE  331 (336)
T ss_dssp             SSCSCSSSSCCC
T ss_pred             hccCCCcCCCCC
Confidence             67999876543


No 11 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.2e-34  Score=291.67  Aligned_cols=211  Identities=18%  Similarity=0.225  Sum_probs=122.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-CCeEEecccchhhhhhhcCCCccccccC---ccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-DHVKIGDFGLATNILQKHAGPLARELTG---YILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~~~~~~~~~~~~~~~~---~~~~~~~~~~~   77 (454)
                      .+++.+++||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+................   ........+..
T Consensus       117 ~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (361)
T 4f9c_A          117 QEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC  196 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-----------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccccccc
Confidence            4789999999999999999999999999999999877 7999999999985432111000000000   00000000001


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch------hhHHHHH
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP------KTLEELK  151 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~------~~~~~l~  151 (454)
                      .......++.+||+.|||||++..  ...|+.++  ||||+              ||++|||++|++      ...+++.
T Consensus       197 ~~~~~~~~~~~GT~~Y~APE~l~~--~~~y~~~~--DiWSl--------------G~il~ell~G~~Pf~~~~~~~~~l~  258 (361)
T 4f9c_A          197 LSRRQQVAPRAGTPGFRAPEVLTK--CPNQTTAI--DMWSA--------------GVIFLSLLSGRYPFYKASDDLTALA  258 (361)
T ss_dssp             ---------CCCCGGGCCHHHHTT--CSCCCTHH--HHHHH--------------HHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred             ccccccccccccCccccCHHHHcC--CCCCCCcc--chhhh--------------HHHHHHHHHCCCCCCCCCCHHHHHH
Confidence            122334566799999999999871  34588889  99999              999999877664      2334444


Q ss_pred             HHhhhcCCC------------------CCCchhhhhhhhhccCCCCCCCccccccc---cccccccccccchhHHHHHHH
Q psy7309         152 HNIRRENGP------------------STGSNVQKSLQKFQKSPPSVYREWRSSFE---WSTVRNNIKSNFQHFLILIHQ  210 (454)
Q Consensus       152 ~~i~~~~~p------------------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~li~~~~  210 (454)
                      .++...+.|                  .+..........+.. .....|.......   .........++++.+||    
T Consensus       259 ~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl----  333 (361)
T 4f9c_A          259 QIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRG-MDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL----  333 (361)
T ss_dssp             HHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-----------------------CTTCCHHHHHHH----
T ss_pred             HHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcc-ccccccccccccccccccccccccCCHHHHHHH----
Confidence            433322211                  111112222222211 1111111100000   00000122347778888    


Q ss_pred             HhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         211 QKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       211 ~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                       ++||+.||++||||+|+|+||||++
T Consensus       334 -~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          334 -DKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             -HHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             -HHHCcCChhHCcCHHHHhcCcccCC
Confidence             9999999999999999999999985


No 12 
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=99.98  E-value=2.5e-33  Score=294.73  Aligned_cols=154  Identities=26%  Similarity=0.449  Sum_probs=137.0

Q ss_pred             CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----ccccEEEEcCCCCeEeeCC
Q psy7309         292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----SETTASVMTRGGSIVTLPH  367 (454)
Q Consensus       292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~~~~~~~~d~~G~~~~Lr~  367 (454)
                      +.+.++.|++       |.++.++++|++.++++|++|||.+|.||+||+.+++..+    .+.+|+|.|++|+.++|||
T Consensus        68 ~~P~G~~D~l-------P~~~~~~~~ie~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~ge~~~~my~f~D~~g~~l~LRP  140 (517)
T 4g85_A           68 KTPKGTRDYS-------PRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRY  140 (517)
T ss_dssp             CCCTTCCCBC-------HHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHHCC------CSCBBCCTTSCCEEECS
T ss_pred             eCCCCCCccC-------HHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhhcccCcCcceeEEEECCCCCEEEeCC
Confidence            5667788888       8889999999999999999999999999999999998653    3679999999999999999


Q ss_pred             CCCHHHHHHHHHcCCCCceeeEeecCccccCCC--CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcE
Q psy7309         368 DLRIPFARYLAQNGSIVSMKRYCIDRVFRERRV--LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNIS  445 (454)
Q Consensus       368 d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~--~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~  445 (454)
                      |+|+|+||++++|. ..|+|+||+|+|||+++|  ++||+|||+|+||||+|..++..+|+|+|.++.++|+.+|++++.
T Consensus       141 d~T~~~aR~~~~~~-~~p~k~yyig~vfR~Erp~~~~GR~ReF~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~~~  219 (517)
T 4g85_A          141 DLTVPFARYLAMNK-LTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGDFL  219 (517)
T ss_dssp             CSHHHHHHHHHHTT-CSCEEEEEEEEEECCCC-------CCEEEEEEEEEESCCCTTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred             cCcHHHHHHHHhCC-CCCceeEEEeceEeccCcccccCccceeeeeceeccCCccchHHHHHHHHHHHHHHHhhcCCccc
Confidence            99999999999887 789999999999999987  579999999999999998646678999999999999999999999


Q ss_pred             EEcCcccc
Q psy7309         446 FAPHPRVL  453 (454)
Q Consensus       446 i~i~~~~~  453 (454)
                      |+|||+++
T Consensus       220 i~in~~~~  227 (517)
T 4g85_A          220 VKVNDRRI  227 (517)
T ss_dssp             EEEEEHHH
T ss_pred             ccccchhh
Confidence            99999864


No 13 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.98  E-value=1.3e-33  Score=301.01  Aligned_cols=170  Identities=25%  Similarity=0.342  Sum_probs=132.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      +.++.+++||+.||+|||++|||||||||+|||++.+|++||+|||+|+.+.                           .
T Consensus       292 ~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~---------------------------~  344 (689)
T 3v5w_A          292 ADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS---------------------------K  344 (689)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECS---------------------------S
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecC---------------------------C
Confidence            3689999999999999999999999999999999999999999999998542                           1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ....+.+||+.|||||++..  +..|+.++  ||||+              ||++|||++|++               ||
T Consensus       345 ~~~~t~~GTp~YmAPEvl~~--~~~y~~~v--DiWSL--------------GvilYEmLtG~~---------------PF  391 (689)
T 3v5w_A          345 KKPHASVGTHGYMAPEVLQK--GVAYDSSA--DWFSL--------------GCMLFKLLRGHS---------------PF  391 (689)
T ss_dssp             CCCCSCCSCGGGCCHHHHST--TCCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             CCCCCccCCcCccCHHHHhC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            22345799999999999962  45799999  99999              999999877665               33


Q ss_pred             CCch---hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCcc
Q psy7309         162 TGSN---VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPI  233 (454)
Q Consensus       162 ~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~  233 (454)
                      .+.+   .......+. .....+|..+             ++++.+||     .+||+.||++|++     |+|+++|||
T Consensus       392 ~~~~~~~~~~i~~~i~-~~~~~~p~~~-------------S~~a~dLI-----~~lL~~dP~~Rl~~~~~ga~ei~~Hpf  452 (689)
T 3v5w_A          392 RQHKTKDKHEIDRMTL-TMAVELPDSF-------------SPELRSLL-----EGLLQRDVNRRLGCLGRGAQEVKESPF  452 (689)
T ss_dssp             CGGGCCCHHHHHHHHH-HCCCCCCTTS-------------CHHHHHHH-----HHHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred             CCCChHHHHHHHHhhc-CCCCCCCccC-------------CHHHHHHH-----HHHccCCHhHCCCCCCCCHHHHhcCcc
Confidence            2211   111222222 2334445442             37888999     9999999999998     799999999


Q ss_pred             cccCCCCCCCccCccccccCCCCCC
Q psy7309         234 SLEGSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       234 f~~~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                      |..        ++|+.+......||
T Consensus       453 F~~--------idW~~l~~~~~~pP  469 (689)
T 3v5w_A          453 FRS--------LDWQMVFLQKYPPP  469 (689)
T ss_dssp             GTT--------CCHHHHHTTCSCCS
T ss_pred             ccC--------CCHHHHHcCCCCcC
Confidence            974        78888776554444


No 14 
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=99.97  E-value=9.7e-33  Score=277.50  Aligned_cols=171  Identities=13%  Similarity=0.062  Sum_probs=142.6

Q ss_pred             CCCChhHHHHHHHHhC--CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----c
Q psy7309         276 NPQSKGYKYLVAACFN--QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----S  349 (454)
Q Consensus       276 ~~~s~~~~~~~~~~f~--q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~  349 (454)
                      -.-|+.-+++.+++|+  +.++++.|++       |.++.++++|++.++++|++|||.+|.||+||+.+++..+    .
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~p~G~~d~l-------P~~~~~~~~i~~~i~~~f~~~Gy~eI~tP~le~~el~~~~g~~~~   78 (373)
T 3rac_A            6 GTRSAWGARAWEAVRGFADRPPGMQDGY-------PDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRARSPES   78 (373)
T ss_dssp             ------------CCCCCCCCCTTCCCCC-------TTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHTTSCTTS
T ss_pred             CCcCHHHHHHHHHHHhcCCCCCCccccC-------HHHHHHHHHHHHHHHHHHHHcCCeEEECCceeeHHHHhhcCCccc
Confidence            3456777888999999  8888999999       7888899999999999999999999999999999998653    3


Q ss_pred             -cccEEEEcCCCCeEeeCCCCCHHHHHHHHHcC--CCCceeeEeecCccccCCC------CCCccceEEEEEEEEEcCCC
Q psy7309         350 -ETTASVMTRGGSIVTLPHDLRIPFARYLAQNG--SIVSMKRYCIDRVFRERRV------LGFHPRELYECAFDIVTNTP  420 (454)
Q Consensus       350 -~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~--~~~~~k~~y~g~vfR~~~~------~~g~~rE~~Q~g~eiig~~~  420 (454)
                       ++||+|.|++|+.++||||+|+|+||+++++.  ...|+|+||+|+|||++++      +.||+|||+|+|+|++|.++
T Consensus        79 ~~~my~~~D~~g~~l~LRpd~T~~~aR~~~~~~~~~~~P~r~~y~g~vfR~e~~g~~~~~~~gR~ReF~Q~g~ei~g~~d  158 (373)
T 3rac_A           79 SRDWIRLFDGGGDAVALRPEMTPSIARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGKAAESTQVGIERIGEEA  158 (373)
T ss_dssp             CCCCCBCCCCSSSCEEECSSSHHHHHHHHHHHHHTTCCCCEEEEEEEEEECC------------CEEEEEEEEEECSSCC
T ss_pred             hhceEEEECCCCCEEEECCcCHHHHHHHHHhccccCCCCeEEEEEcceEccCCCcccccccCCccceeEEeeeEEECCCC
Confidence             68999999999999999999999999998752  2689999999999999988      89999999999999999876


Q ss_pred             CcccHHHHHHHHHHHHHhCCCCCcEEEcCcccc
Q psy7309         421 GVLTMGSLRRCLMGSFRRFNYGNISFAPHPRVL  453 (454)
Q Consensus       421 ~~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~~~  453 (454)
                      ++.+|+|+|.++.++|+.+|+++++|+|||+++
T Consensus       159 ~~~aDaEvi~l~~~~l~~lgl~~~~i~l~~~~i  191 (373)
T 3rac_A          159 SVDVDMDVLRLLHEASAAAGVRHHRIVVSHARL  191 (373)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCCSCEEEEEETTH
T ss_pred             CHHHHHHHHHHHHHHHHHcCCCceEEEecCHHH
Confidence            889999999999999999999999999999974


No 15 
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=99.97  E-value=3.7e-32  Score=275.74  Aligned_cols=155  Identities=15%  Similarity=0.214  Sum_probs=140.1

Q ss_pred             CCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----ccccEEEEcCCCCeEeeC
Q psy7309         291 NQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----SETTASVMTRGGSIVTLP  366 (454)
Q Consensus       291 ~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~~~~~~~~d~~G~~~~Lr  366 (454)
                      -+.++++.|++       |.++.++++|++.++++|++|||.+|.||+||+.+++..+    .+++|+|.|++|+.++||
T Consensus        10 ~~~p~G~~d~l-------P~~~~~~~~i~~~l~~~~~~~Gy~eI~tP~lE~~el~~~~g~~~~~~my~f~D~~g~~l~LR   82 (400)
T 3od1_A           10 FEKPFGMRDTL-------PEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVSAILDQQLFKLLDQQGNTLVLR   82 (400)
T ss_dssp             TCCCTTCCCBC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETTTHHHHSSSCGGGSCEEECTTSCEEEEC
T ss_pred             ccCCCcchhcC-------HHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccceEEEECCCCCEEEEC
Confidence            34566788888       8888899999999999999999999999999999998643    368999999999999999


Q ss_pred             CCCCHHHHHHHHHcC--CCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCc
Q psy7309         367 HDLRIPFARYLAQNG--SIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNI  444 (454)
Q Consensus       367 ~d~T~p~aR~~a~~~--~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~  444 (454)
                      ||+|+|+||+++++.  ...|+|+||+|+|||+++++.||+|||+|+|+|+||.+ ++.+|+|+|.++.++|+.+|++++
T Consensus        83 pd~T~~~aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~Ref~Q~g~ei~G~~-~~~aDaEvi~l~~~~l~~lgl~~~  161 (400)
T 3od1_A           83 PDMTAPIARLVASSLKDRAYPLRLAYQSNVYRAQQNEGGKPAEFEQLGVELIGDG-TASADGEVIALMIAALKRAGLSEF  161 (400)
T ss_dssp             SCSHHHHHHHHHHHCSSSCSCEEEEEEEEEECCCC---CCCSEEEEEEEEEESCC-SHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred             CCCHHHHHHHHHhhcccCCCCeEEEEEcCEEeCCCCCCCCCCccEEeEEEEECCC-ChHhHHHHHHHHHHHHHHCCCCce
Confidence            999999999999763  26899999999999999999999999999999999998 899999999999999999999999


Q ss_pred             EEEcCcccc
Q psy7309         445 SFAPHPRVL  453 (454)
Q Consensus       445 ~i~i~~~~~  453 (454)
                      +|+|||+++
T Consensus       162 ~i~l~~~~i  170 (400)
T 3od1_A          162 KVAIGHVGY  170 (400)
T ss_dssp             EEEEEEHHH
T ss_pred             EEEecCHHH
Confidence            999999974


No 16 
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=99.97  E-value=3.2e-32  Score=282.19  Aligned_cols=154  Identities=21%  Similarity=0.313  Sum_probs=133.6

Q ss_pred             CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc---ccc-cEEEEcC---------
Q psy7309         292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT---SET-TASVMTR---------  358 (454)
Q Consensus       292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~---~~~-~~~~~d~---------  358 (454)
                      +.+.++.|++       |.++..+++|++.++++|++|||.+|.||+||+.+++..+   .++ ||+|.|+         
T Consensus        13 ~~p~G~~D~l-------P~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~~E~~~~~~~~G~~~ke~m~~~~d~~~~g~~~~~   85 (465)
T 3net_A           13 STPSGFPEFL-------PSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQGDNIIYGLEPILPPNRQAEK   85 (465)
T ss_dssp             SCCTTCCCCC-------HHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHGGGCC--CBEEEEEEEC--------
T ss_pred             cCCCCccccC-------HHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHHhccCCCCccceEEEeccccccccccc
Confidence            4566788888       8888999999999999999999999999999999998643   256 9999998         


Q ss_pred             ------CCCeEeeCCCCCHHHHHHHHHcCC--CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCccc--HHHH
Q psy7309         359 ------GGSIVTLPHDLRIPFARYLAQNGS--IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLT--MGSL  428 (454)
Q Consensus       359 ------~G~~~~Lr~d~T~p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~--d~e~  428 (454)
                            +|+.++||||+|+|+||+++++..  ..|+|+||+|+|||+++++.||+|||+|||+|+||.+ ++.+  |+|+
T Consensus        86 ~~~~~~~g~~l~LRpd~T~~~aR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~Ref~Q~g~ei~G~~-~~~a~~DaEv  164 (465)
T 3net_A           86 DKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGRE-KLSLLYDAQM  164 (465)
T ss_dssp             --------CCEEECSCSHHHHHHHHHHHGGGSCSSEEEEECCEEECBC------CCEEEEEEEEEECSS-CCCHHHHHHH
T ss_pred             ccccCCCCCEEEeCCCChHHHHHHHHhcccccCCCeEEEEeccEEecCCCCCCCcceeEEeeEEEECCC-CccchhhHHH
Confidence                  389999999999999999998643  5799999999999999999999999999999999998 8999  9999


Q ss_pred             HHHHHHHHHhCCCCCcEEEcCcccc
Q psy7309         429 RRCLMGSFRRFNYGNISFAPHPRVL  453 (454)
Q Consensus       429 ~~~~~~~l~~~~~~~~~i~i~~~~~  453 (454)
                      |.++.++|+.+|+++++|+||||++
T Consensus       165 i~l~~~~l~~lgl~~~~i~in~~~~  189 (465)
T 3net_A          165 PAIITEIFEAVNIGDFVIRINNRKV  189 (465)
T ss_dssp             HHHHHHHHHHHTCSCEEEEEEEHHH
T ss_pred             HHHHHHHHHHcCCCceEEEECCHHH
Confidence            9999999999999999999999874


No 17 
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=99.97  E-value=1.1e-31  Score=276.63  Aligned_cols=155  Identities=19%  Similarity=0.269  Sum_probs=138.6

Q ss_pred             CCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-----ccccEEEEcCCCCeEee
Q psy7309         291 NQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-----SETTASVMTRGGSIVTL  365 (454)
Q Consensus       291 ~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-----~~~~~~~~d~~G~~~~L  365 (454)
                      -+..+++.|++       |.++.++++|++.++++|++|||.+|.||+||+.+++..+     .+++|+|.|++|+.++|
T Consensus        29 ~~~p~G~~d~l-------P~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~G~~~~~~my~f~D~~g~~l~L  101 (456)
T 3lc0_A           29 TEPVQGCRDFP-------PEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEITEQMFNFITKGGHRVAL  101 (456)
T ss_dssp             CSCSTTCCCCC-------HHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCCHHHHTCEEEECSSSCEEEE
T ss_pred             ccCCCCCcccC-------HhHHHHHHHHHHHHHHHHHHCCCEEEECCcEeehhhhccccccchhhceEEEEcCCCCEEec
Confidence            35667788888       8888999999999999999999999999999999998654     26799999999999999


Q ss_pred             CCCCCHHHHHHHHHcCC--CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCC--
Q psy7309         366 PHDLRIPFARYLAQNGS--IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNY--  441 (454)
Q Consensus       366 r~d~T~p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~--  441 (454)
                      |||+|+|+||+++++..  ..|+|+||+|+|||+++++.||+|||+|+|+||||.+ ++.+|+|+|.++.++|+.+|+  
T Consensus       102 Rpd~T~~~aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~ReF~Q~g~ei~G~~-~~~~DaEvi~l~~~~l~~lgl~~  180 (456)
T 3lc0_A          102 RPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIVGVK-SVSAEVELVCAACWAMRSLGLSS  180 (456)
T ss_dssp             CSCSHHHHHHHHHHSCTTCCSSEEEEECCEEECCCC-----CCEEEEEEEEEESCC-STHHHHHHHHHHHHHHHHTTCCT
T ss_pred             CCcCHHHHHHHHHhcCcccCCCEEEEEeccEEecCCCCCCCccceEEEEEEEEcCC-ChHhhHHHHHHHHHHHHHcCCCC
Confidence            99999999999998753  4699999999999999999999999999999999998 899999999999999999999  


Q ss_pred             CCcEEEcCcccc
Q psy7309         442 GNISFAPHPRVL  453 (454)
Q Consensus       442 ~~~~i~i~~~~~  453 (454)
                      +++.|+||||++
T Consensus       181 ~~~~i~in~~~i  192 (456)
T 3lc0_A          181 KDVGIKVNSRKV  192 (456)
T ss_dssp             TTEEEEEEEHHH
T ss_pred             CceEEEEcCHHH
Confidence            799999999864


No 18 
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=99.97  E-value=5.5e-32  Score=281.20  Aligned_cols=155  Identities=26%  Similarity=0.440  Sum_probs=138.6

Q ss_pred             CCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc----ccccEEEEcCCCCeEeeC
Q psy7309         291 NQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT----SETTASVMTRGGSIVTLP  366 (454)
Q Consensus       291 ~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~----~~~~~~~~d~~G~~~~Lr  366 (454)
                      -+.+.++.|++       |.++.++++|++.++++|++|||++|.||+||+.+++..+    .+++|+|.|++|+.++||
T Consensus        14 ~~~p~G~~D~l-------P~~~~~~~~i~~~~~~~~~~~Gy~eI~tP~le~~el~~~~~g~~~~~~y~f~D~~g~~l~LR   86 (464)
T 4g84_A           14 LKTPKGTRDYS-------PRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLR   86 (464)
T ss_dssp             CCCCTTCCCBC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCC----CCCBBCCCSSCCEEEC
T ss_pred             eeCCCCcCccC-------HHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhccccCcCcceeEEEECCCCCEEEeC
Confidence            45667899998       8888999999999999999999999999999999998653    367999999999999999


Q ss_pred             CCCCHHHHHHHHHcCCCCceeeEeecCccccCCC--CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCc
Q psy7309         367 HDLRIPFARYLAQNGSIVSMKRYCIDRVFRERRV--LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNI  444 (454)
Q Consensus       367 ~d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~--~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~  444 (454)
                      ||+|+|+||++++|. ..|+|+||+|+|||+++|  +.||+|||+|+|+|++|..++..+|+|+|.++.++|+.+|++++
T Consensus        87 Pd~T~~~aR~~~~~~-~~p~k~~y~g~vfR~erp~~~~gR~Ref~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~~  165 (464)
T 4g84_A           87 YDLTVPFARYLAMNK-LTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGDF  165 (464)
T ss_dssp             SCSHHHHHHHHHHTT-CSCEEEEEEEEEECCCC------CCSEEEEEEEEEESCCSTTHHHHHHHHHHHHHHHHHTCCCE
T ss_pred             CcCcHHHHHHHHhcC-CCCceeEEEecceeccCCccccCccceeeecceeccCCccchhhHHHHHHHHHHHHHHhCCCCc
Confidence            999999999999887 789999999999999987  56899999999999999864667899999999999999999999


Q ss_pred             EEEcCcccc
Q psy7309         445 SFAPHPRVL  453 (454)
Q Consensus       445 ~i~i~~~~~  453 (454)
                      .|+|||+++
T Consensus       166 ~i~i~~~~~  174 (464)
T 4g84_A          166 LVKVNDRRI  174 (464)
T ss_dssp             EEEEEEHHH
T ss_pred             ceeecchhh
Confidence            999999863


No 19 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.97  E-value=8e-33  Score=271.67  Aligned_cols=161  Identities=24%  Similarity=0.304  Sum_probs=113.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .++.+|+.||+.||+|||++|||||||||+|||++.++++||+|||+|+.....                       ...
T Consensus       132 ~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~-----------------------~~~  188 (307)
T 3omv_A          132 FQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW-----------------------SGS  188 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccC-----------------------Ccc
Confidence            468899999999999999999999999999999999999999999999854321                       112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ...+..+||+.|||||++.......|+.++  ||||+              ||++|||++|++               |+
T Consensus       189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ks--DVwS~--------------Gvvl~Elltg~~---------------Pf  237 (307)
T 3omv_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQS--DVYSY--------------GIVLYELMTGEL---------------PY  237 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             eeecccccCCCccCHHHhhccCCCCCCcHH--HhHhH--------------HHHHHHHHHCCC---------------CC
Confidence            234567899999999998633345689899  99999              999999877654               33


Q ss_pred             CCchhhhhh-hhhccCC-CCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         162 TGSNVQKSL-QKFQKSP-PSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       162 ~~~~~~~~~-~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      .+.+....+ ..+.... .+.++...          ...++.+.+|+     .+||+.||++|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~p~~~~~~----------~~~~~~l~~li-----~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          238 SHINNRDQIIFMVGRGYASPDLSKLY----------KNCPKAMKRLV-----ADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             TTCCCHHHHHHHHHTTCCCCCSTTSC----------TTSCHHHHHHH-----HHHTCSSSTTSCCHHHHHHH
T ss_pred             CCCChHHHHHHHHhcCCCCCCccccc----------ccchHHHHHHH-----HHHcCCCHhHCcCHHHHHHH
Confidence            332222211 1222111 11112111          11236677888     99999999999999988754


No 20 
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A*
Probab=99.97  E-value=1.2e-31  Score=266.97  Aligned_cols=154  Identities=15%  Similarity=0.217  Sum_probs=135.3

Q ss_pred             CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccc---c-----ccccEEEEcCCCCeE
Q psy7309         292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA---T-----SETTASVMTRGGSIV  363 (454)
Q Consensus       292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~---~-----~~~~~~~~d~~G~~~  363 (454)
                      +..+++.|++       |.++.++++|++.++++|++|||.+|.||+||+.+++..   +     .+++|+|.|++|+.+
T Consensus        23 ~~~~G~~d~l-------P~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~le~~el~~~s~~g~~~~~~~~my~~~D~~g~~l   95 (344)
T 1z7m_A           23 LLPEESAEMT-------LNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSI   95 (344)
T ss_dssp             CCCTTCCCCC-------HHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEE
T ss_pred             CCCCCcccCC-------HHHHHHHHHHHHHHHHHHHHcCCEEecCcccCcHHHHhhccCCccccccccEEEEECCCCCEE
Confidence            4566778887       888889999999999999999999999999999999854   2     368999999999999


Q ss_pred             eeCCCCCHHHHHHHHHcCCCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCC
Q psy7309         364 TLPHDLRIPFARYLAQNGSIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGN  443 (454)
Q Consensus       364 ~Lr~d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~  443 (454)
                      +||||+|+|+||+++++....|+|+||+|+|||+++++.||+|||+|+|+|++|.+ ++.+|+|+|.++.++|+.+|+++
T Consensus        96 ~LRpd~T~~~aR~~~~~~~~~P~rl~y~g~vfR~e~p~~gR~REF~Q~g~ei~g~~-~~~aDaEvi~l~~~~l~~lgl~~  174 (344)
T 1z7m_A           96 TLRYDFTLPLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGES-ADKSELEILSLALQVIEQLGLNK  174 (344)
T ss_dssp             EECCCSHHHHHHHHHTCCSCCCEEEEEEEECCCCCC-------CCEEEEEEEESSC-HHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             ecCCCCcHHHHHHHHhcCCCCCeEEEEECcEEccCCCCCCCcceeEEEEEEEEcCC-CcHHHHHHHHHHHHHHHHCCCCc
Confidence            99999999999999987435899999999999999999999999999999999988 88999999999999999999999


Q ss_pred             cEEEcCcccc
Q psy7309         444 ISFAPHPRVL  453 (454)
Q Consensus       444 ~~i~i~~~~~  453 (454)
                      ++|+|||+++
T Consensus       175 ~~i~l~~~gi  184 (344)
T 1z7m_A          175 TVFEIGSAKF  184 (344)
T ss_dssp             EEEEEEEHHH
T ss_pred             EEEEECCHHH
Confidence            9999999874


No 21 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.97  E-value=1.4e-32  Score=292.47  Aligned_cols=164  Identities=27%  Similarity=0.378  Sum_probs=129.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC--CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE--DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~--~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      .+++.+++||+.||+|||++||+||||||+|||++.+  +.+||+|||+|+.+..                         
T Consensus       255 ~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~-------------------------  309 (573)
T 3uto_A          255 DEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-------------------------  309 (573)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC-------------------------
Confidence            3689999999999999999999999999999999854  7899999999986521                         


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                       .......+||+.|||||++.   +..|+.++  ||||+              ||++|||++|.+               
T Consensus       310 -~~~~~~~~GT~~y~APEv~~---~~~y~~~~--DiWSl--------------Gvilyeml~G~~---------------  354 (573)
T 3uto_A          310 -KQSVKVTTGTAEFAAPEVAE---GKPVGYYT--DMWSV--------------GVLSYILLSGLS---------------  354 (573)
T ss_dssp             -TSEEEEECSSGGGCCHHHHT---TCCBCHHH--HHHHH--------------HHHHHHHHHSCC---------------
T ss_pred             -CCceeeeEECccccCHHHhC---CCCCCcHH--HHHHH--------------HHHHHHHHHCCC---------------
Confidence             22344578999999999998   77899999  99999              999999876653               


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      ||.+.+....+..+.... ..++...    |     ...++.+.+||     ++||+.||++|||++|+|+||||.....
T Consensus       355 Pf~~~~~~~~~~~i~~~~-~~~~~~~----~-----~~~s~~~~dli-----~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          355 PFGGENDDETLRNVKSCD-WNMDDSA----F-----SGISEDGKDFI-----RKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             SSCCSSHHHHHHHHHTTC-CCCCSGG----G-----TTSCHHHHHHH-----HTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             CCCCcCHHHHHHHHHhCC-CCCCccc----c-----cCCCHHHHHHH-----HHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            555555555555554332 2222221    1     12347788898     9999999999999999999999997654


Q ss_pred             C
Q psy7309         240 S  240 (454)
Q Consensus       240 ~  240 (454)
                      +
T Consensus       420 ~  420 (573)
T 3uto_A          420 P  420 (573)
T ss_dssp             T
T ss_pred             C
Confidence            3


No 22 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.97  E-value=1.9e-32  Score=271.99  Aligned_cols=155  Identities=16%  Similarity=0.228  Sum_probs=116.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .++.+|+.||+.||+|||+++||||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       158 ~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~-----------------------~~~  214 (329)
T 4aoj_A          158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST-----------------------DYY  214 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCC-----------------------Ccc
Confidence            467899999999999999999999999999999999999999999999865321                       112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      ...+..+||+.|||||++.   +..|+.++  ||||+              ||++|||++ |+.               |
T Consensus       215 ~~~~~~~gt~~ymAPE~~~---~~~~~~~s--DvwS~--------------Gvvl~Ellt~G~~---------------P  260 (329)
T 4aoj_A          215 RVGGRTMLPIRWMPPESIL---YRKFTTES--DVWSF--------------GVVLWEIFTYGKQ---------------P  260 (329)
T ss_dssp             -----CCCCGGGCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             eecCcccccccccChhhhc---CCCCCccc--cccch--------------HHHHHHHHcCCCC---------------C
Confidence            2334568999999999998   77899999  99999              999999876 443               5


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.+..+.+..+..+.....|..+             ++++.+|+     .+||+.||++|||++|++++
T Consensus       261 f~~~~~~~~~~~i~~g~~~~~p~~~-------------~~~~~~li-----~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          261 WYQLSNTEAIDCITQGRELERPRAC-------------PPEVYAIM-----RGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             TCSSCHHHHHHHHHHTCCCCCCTTC-------------CHHHHHHH-----HHHCCSSTTTSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCcccc-------------cHHHHHHH-----HHHcCcChhHCcCHHHHHHH
Confidence            5555555555555555555555543             26677888     99999999999999988763


No 23 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.97  E-value=1.9e-32  Score=269.46  Aligned_cols=155  Identities=20%  Similarity=0.248  Sum_probs=124.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .++.+|+.||+.||+|||+++||||||||+|||++.++++||+|||+|+.....                       ...
T Consensus       145 ~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~-----------------------~~~  201 (308)
T 4gt4_A          145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA-----------------------DYY  201 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGG-----------------------GCB
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCC-----------------------Cce
Confidence            357889999999999999999999999999999999999999999999865421                       112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      ...+..+||+.|||||++.   +..|+.++  ||||+              ||++||+++ |.               .|
T Consensus       202 ~~~~~~~gt~~ymAPE~l~---~~~~s~ks--DVwSf--------------Gvvl~El~t~g~---------------~P  247 (308)
T 4gt4_A          202 KLLGNSLLPIRWMAPEAIM---YGKFSIDS--DIWSY--------------GVVLWEVFSYGL---------------QP  247 (308)
T ss_dssp             CSSSSSCBCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTTC---------------CT
T ss_pred             eEecccccCCcccCHHHHh---CCCCCccc--hhhhH--------------HHHHHHHHhCCC---------------CC
Confidence            2345578999999999998   67899999  99999              999999876 43               35


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.+.......+..+.....|...             ++...+++     .+||+.||++|||+.|++++
T Consensus       248 f~~~~~~~~~~~i~~~~~~~~p~~~-------------~~~~~~li-----~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          248 YCGYSNQDVVEMIRNRQVLPCPDDC-------------PAWVYALM-----IECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             TTTCCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCcccc-------------hHHHHHHH-----HHHcCCChhHCcCHHHHHHH
Confidence            5555556666666655555555443             25667788     99999999999999998864


No 24 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.97  E-value=1.5e-32  Score=269.21  Aligned_cols=157  Identities=17%  Similarity=0.208  Sum_probs=124.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .++.+++.||+.||+|||+++||||||||+|||++.++++||+|||+|+.....                       ...
T Consensus       128 ~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~-----------------------~~~  184 (299)
T 4asz_A          128 SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST-----------------------DYY  184 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG-----------------------GCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC-----------------------Cce
Confidence            467899999999999999999999999999999999999999999999865321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|||||++.   +..|+.++  ||||+              ||++|||++ |++               |
T Consensus       185 ~~~~~~~gt~~ymAPE~~~---~~~~~~k~--DVwS~--------------Gvvl~Ellt~G~~---------------P  230 (299)
T 4asz_A          185 RVGGHTMLPIRWMPPESIM---YRKFTTES--DVWSL--------------GVVLWEIFTYGKQ---------------P  230 (299)
T ss_dssp             EETTTEEECGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTTCC---------------T
T ss_pred             eecCceecChhhcCHHHHc---CCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence            1233457999999999998   77899999  99999              999999876 443               5


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      +.+.+..+.+..+..+.....|...             ++++.+|+     .+||+.||++|||++|++  +|+.
T Consensus       231 f~~~~~~~~~~~i~~~~~~~~p~~~-------------~~~~~~li-----~~cl~~dP~~RPs~~~i~--~~L~  285 (299)
T 4asz_A          231 WYQLSNNEVIECITQGRVLQRPRTC-------------PQEVYELM-----LGCWQREPHMRKNIKGIH--TLLQ  285 (299)
T ss_dssp             TTTSCHHHHHHHHHHTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHH--HHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCccc-------------hHHHHHHH-----HHHcCCChhHCcCHHHHH--HHHH
Confidence            5555555566666555555555543             26677888     999999999999999883  4554


No 25 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.97  E-value=2.5e-32  Score=273.41  Aligned_cols=155  Identities=21%  Similarity=0.316  Sum_probs=121.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      +++..++.||+.||+|||+++||||||||+|||++.++.+||+|||+|+.+...                       ...
T Consensus       185 ~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~-----------------------~~~  241 (353)
T 4ase_A          185 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-----------------------PDY  241 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTC-----------------------TTS
T ss_pred             HHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccC-----------------------CCc
Confidence            457889999999999999999999999999999999999999999999865321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      ...+..+||+.|||||++.   +..|+.++  ||||+              ||++|||++ |++               |
T Consensus       242 ~~~~~~~gt~~ymAPE~l~---~~~y~~ks--DVwS~--------------Gv~l~El~t~G~~---------------P  287 (353)
T 4ase_A          242 VRKGDARLPLKWMAPETIF---DRVYTIQS--DVWSF--------------GVLLWEIFSLGAS---------------P  287 (353)
T ss_dssp             EEETTEEECGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHTTTSCC---------------S
T ss_pred             eeeccccccccccCHHHHh---cCCCCCcc--cEeeh--------------HHHHHHHHhCCCC---------------C
Confidence            2334578999999999998   77899999  99999              999999876 443               4


Q ss_pred             CCCchh-hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNV-QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+... ......+..+..+..|...             +++..+++     .+||+.||++|||++|+++|
T Consensus       288 f~~~~~~~~~~~~i~~g~~~~~p~~~-------------~~~~~~li-----~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          288 YPGVKIDEEFCRRLKEGTRMRAPDYT-------------TPEMYQTM-----LDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             STTCCCSHHHHHHHHHTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCccC-------------CHHHHHHH-----HHHcCcChhHCcCHHHHHHH
Confidence            444332 2233344444455555443             26777888     99999999999999999886


No 26 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.96  E-value=1.5e-30  Score=258.48  Aligned_cols=159  Identities=25%  Similarity=0.335  Sum_probs=125.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.+++||+.||+|||++||+||||||+|||++.++++||+|||+|....                          ..
T Consensus       114 ~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~--------------------------~~  167 (328)
T 3fe3_A          114 KEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT--------------------------VG  167 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS--------------------------SS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecC--------------------------CC
Confidence            3688999999999999999999999999999999999999999999997542                          12


Q ss_pred             CCCcCcccccceecccccccccccccc-ccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYN-QFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~-~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|+|||++.   +..|+ .++  ||||+              ||++|+|++|++               |
T Consensus       168 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~~--Diwsl--------------G~il~ell~g~~---------------p  213 (328)
T 3fe3_A          168 GKLDAFCGAPPYAAPELFQ---GKKYDGPEV--DVWSL--------------GVILYTLVSGSL---------------P  213 (328)
T ss_dssp             CGGGTTSSSGGGCCHHHHH---TCCCCSHHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             CccccccCCcceeCccccc---CCCcCCchh--hhhhh--------------HHHHHHHHhCCC---------------C
Confidence            2345578999999999987   45554 677  99999              999999776543               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +.+.+......++... ...+|...             ++.+.+||     ++||+.||.+|||++|+++||||.....
T Consensus       214 f~~~~~~~~~~~i~~~-~~~~p~~~-------------s~~~~~li-----~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          214 FDGQNLKELRERVLRG-KYRIPFYM-------------STDCENLL-----KRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             SCCSSHHHHHHHHHHC-CCCCCTTS-------------CHHHHHHH-----HHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             CCCCCHHHHHHHHHhC-CCCCCCCC-------------CHHHHHHH-----HHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence            4444444444444422 23334332             36677888     9999999999999999999999987554


No 27 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.96  E-value=1.3e-30  Score=259.75  Aligned_cols=171  Identities=23%  Similarity=0.351  Sum_probs=133.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      +.++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+...                         ...
T Consensus       105 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~-------------------------~~~  159 (337)
T 1o6l_A          105 ERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-------------------------SDG  159 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC-------------------------CTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcc-------------------------cCC
Confidence            4678999999999999999999999999999999999999999999987431                         112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  |+||+              ||++|||++|.+               |+
T Consensus       160 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~---------------Pf  205 (337)
T 1o6l_A          160 ATMKTFCGTPEYLAPEVLE---DNDYGRAV--DWWGL--------------GVVMYEMMCGRL---------------PF  205 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGS---SSCBCTTH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             CcccccccChhhCChhhhc---CCCCCchh--hcccc--------------hhHHHHHhcCCC---------------CC
Confidence            2345678999999999998   67788888  99999              999999776553               34


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~  236 (454)
                      .+.+.......+.. ....+|...             ++.+.++|     .+||+.||++||     |++|+++||||..
T Consensus       206 ~~~~~~~~~~~i~~-~~~~~p~~~-------------s~~~~~li-----~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          206 YNQDHERLFELILM-EEIRFPRTL-------------SPEAKSLL-----AGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             CCSSHHHHHHHHHH-CCCCCCTTS-------------CHHHHHHH-----HHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             CCCCHHHHHHHHHc-CCCCCCCCC-------------CHHHHHHH-----HHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence            34333333333332 233344432             37778888     999999999999     8999999999974


Q ss_pred             CCCCCCCccCccccccCCCCCC
Q psy7309         237 GSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       237 ~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                              ++|+.+.+....|+
T Consensus       267 --------~~~~~~~~~~~~pp  280 (337)
T 1o6l_A          267 --------INWQDVVQKKLLPP  280 (337)
T ss_dssp             --------CCHHHHHTTCSCCS
T ss_pred             --------CCHHHHHhCCCCCC
Confidence                    56777776665554


No 28 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.96  E-value=4e-31  Score=265.24  Aligned_cols=171  Identities=28%  Similarity=0.424  Sum_probs=129.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...                         ...
T Consensus       124 ~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~-------------------------~~~  178 (353)
T 3txo_A          124 ARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI-------------------------CNG  178 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC-------------------------C--
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecc-------------------------cCC
Confidence            4688999999999999999999999999999999999999999999997431                         122


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|++               |+
T Consensus       179 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~G~~---------------Pf  224 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQ---EMLYGPAV--DWWAM--------------GVLLYEMLCGHA---------------PF  224 (353)
T ss_dssp             -------CCGGGCCHHHHH---HHHCTTHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             ccccccCCCcCeEChhhcC---CCCcCCcc--CCCcc--------------hHHHHHHHhCCC---------------CC
Confidence            3345578999999999998   67889888  99999              999999876553               44


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh------hhhhcCcccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS------EQNLCQPISL  235 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta------~e~l~hp~f~  235 (454)
                      .+.+......++.. ....+|...             ++.+.++|     ++||+.||++||++      +|+++||||.
T Consensus       225 ~~~~~~~~~~~i~~-~~~~~p~~~-------------~~~~~~li-----~~lL~~dP~~R~~~~~~~~~~~il~hp~f~  285 (353)
T 3txo_A          225 EAENEDDLFEAILN-DEVVYPTWL-------------HEDATGIL-----KSFMTKNPTMRLGSLTQGGEHAILRHPFFK  285 (353)
T ss_dssp             CCSSHHHHHHHHHH-CCCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSTTSGGGTCTHHHHTSGGGT
T ss_pred             CCCCHHHHHHHHHc-CCCCCCCCC-------------CHHHHHHH-----HHHhhhCHHHccCCcccCCHHHHhhCCccc
Confidence            44444444444442 233445442             26677888     99999999999999      8999999998


Q ss_pred             cCCCCCCCccCccccccCCCCCC
Q psy7309         236 EGSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       236 ~~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                      .        ++|+.+......|+
T Consensus       286 ~--------~~w~~l~~~~~~~p  300 (353)
T 3txo_A          286 E--------IDWAQLNHRQIEPP  300 (353)
T ss_dssp             T--------CCHHHHHTTCSCCS
T ss_pred             C--------CCHHHHhcCcCCCC
Confidence            5        56666665544444


No 29 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.96  E-value=1.4e-30  Score=265.05  Aligned_cols=178  Identities=24%  Similarity=0.279  Sum_probs=131.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+...                         ...
T Consensus       153 ~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~-------------------------~~~  207 (396)
T 4dc2_A          153 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-------------------------RPG  207 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC-------------------------CTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecc-------------------------cCC
Confidence            4688999999999999999999999999999999999999999999997421                         122


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC-
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP-  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p-  160 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|+++....        ... 
T Consensus       208 ~~~~~~~gt~~Y~aPE~l~---~~~~~~~~--Diwsl--------------Gvllyell~G~~Pf~~~--------~~~~  260 (396)
T 4dc2_A          208 DTTSTFCGTPNYIAPEILR---GEDYGFSV--DWWAL--------------GVLMFEMMAGRSPFDIV--------GSSD  260 (396)
T ss_dssp             CCBCCCCBCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSCSSTTT--------TC--
T ss_pred             CccccccCCcccCCchhhc---CCCCChHH--HHHHH--------------HHHHHHHHhCCCCCccc--------cccc
Confidence            3455679999999999998   67889888  99999              99999977665422000        000 


Q ss_pred             CCCc-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh------hhhhcCcc
Q psy7309         161 STGS-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS------EQNLCQPI  233 (454)
Q Consensus       161 ~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta------~e~l~hp~  233 (454)
                      .... ........+. .....+|...             ++.+.+||     ++||+.||++|||+      +|+++|||
T Consensus       261 ~~~~~~~~~~~~~i~-~~~~~~p~~~-------------s~~~~~li-----~~lL~~dP~~R~~~~~~~~~~ei~~Hpf  321 (396)
T 4dc2_A          261 NPDQNTEDYLFQVIL-EKQIRIPRSL-------------SVKAASVL-----KSFLNKDPKERLGCHPQTGFADIQGHPF  321 (396)
T ss_dssp             ----CCHHHHHHHHH-HCCCCCCTTS-------------CHHHHHHH-----HHHTCSCTTTSTTCSTTTHHHHHHHSTT
T ss_pred             ccchhhHHHHHHHHh-ccccCCCCcC-------------CHHHHHHH-----HHHhcCCHhHcCCCCCCCCHHHHhcCcc
Confidence            0000 0111122222 2334445442             36778888     99999999999996      79999999


Q ss_pred             cccCCCCCCCccCccccccCCCCCC
Q psy7309         234 SLEGSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       234 f~~~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                      |..        ++|+.+.+....||
T Consensus       322 f~~--------i~w~~l~~~~~~pp  338 (396)
T 4dc2_A          322 FRN--------VDWDMMEQKQVVPP  338 (396)
T ss_dssp             TTT--------CCHHHHHTTCSCCS
T ss_pred             ccC--------CCHHHHHcCCCCCC
Confidence            974        67777776665555


No 30 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.96  E-value=9.1e-30  Score=263.69  Aligned_cols=206  Identities=25%  Similarity=0.306  Sum_probs=123.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCc--cCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGY--ILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~   79 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+.................  ............
T Consensus       156 ~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (458)
T 3rp9_A          156 LHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKN  235 (458)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCcccccccccccccccc
Confidence            368899999999999999999999999999999999999999999999865321110000000000  000000000001


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-----------Cchh---
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-----------DRPK---  145 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-----------~~~~---  145 (454)
                      .....+..+||+.|+|||++..  ...|+.++  ||||+              ||++|||++           +++.   
T Consensus       236 ~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~--DiwSl--------------G~il~elltg~~~~~~~~~~~~p~f~g  297 (458)
T 3rp9_A          236 LKRQLTGHVVTRWYRAPELILL--QENYTEAI--DVWSI--------------GCIFAELLNMIKENVAYHADRGPLFPG  297 (458)
T ss_dssp             ---------CCCTTCCHHHHTT--CCCCCTHH--HHHHH--------------HHHHHHHHTTSTTTCSSGGGCCCSCC-
T ss_pred             ccccccCCcccccccChHHhhC--CCCCCcHh--HHHHH--------------HHHHHHHHHhccccccccccccccCCC
Confidence            1234567899999999998751  46689888  99999              999999775           2221   


Q ss_pred             ----------------------hHHHHHHHhhhcCCCCCCch-------hhhhhhhhccCCCCCCCcccccccccccccc
Q psy7309         146 ----------------------TLEELKHNIRRENGPSTGSN-------VQKSLQKFQKSPPSVYREWRSSFEWSTVRNN  196 (454)
Q Consensus       146 ----------------------~~~~l~~~i~~~~~p~~~~~-------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  196 (454)
                                            ..+++..++...+.|.....       .......+.......         +....+.
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~  368 (458)
T 3rp9_A          298 SSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD---------LAERFPA  368 (458)
T ss_dssp             -------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCC---------GGGGSTT
T ss_pred             CccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCC---------HHHHCCC
Confidence                                  12334333333333322110       011111111111111         1111111


Q ss_pred             ccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309         197 IKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       197 ~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  240 (454)
                       .++.+.+||     ++||..||++|||++|+|+||||......
T Consensus       369 -~s~~~~dLl-----~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          369 -SSADAIHLL-----KRMLVFNPNKRITINECLAHPFFKEVRIA  406 (458)
T ss_dssp             -SCHHHHHHH-----HHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred             -CCHHHHHHH-----HHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence             246777888     99999999999999999999999976544


No 31 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96  E-value=1.7e-30  Score=259.84  Aligned_cols=171  Identities=30%  Similarity=0.437  Sum_probs=132.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+...                         ...
T Consensus       118 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~-------------------------~~~  172 (345)
T 1xjd_A          118 SRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM-------------------------LGD  172 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC-------------------------CTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc-------------------------cCC
Confidence            4688999999999999999999999999999999999999999999987431                         112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  |+||+              ||++|||++|.+               |+
T Consensus       173 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~---------------Pf  218 (345)
T 1xjd_A          173 AKTNTFCGTPDYIAPEILL---GQKYNHSV--DWWSF--------------GVLLYEMLIGQS---------------PF  218 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             CcccCCCCCcccCChhhhc---CCCCCChh--hhHHH--------------HHHHHHHhcCCC---------------CC
Confidence            2345678999999999998   67788888  99999              999999776543               44


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChh-hhhcCcccccCCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSE-QNLCQPISLEGSSS  240 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~-e~l~hp~f~~~~~~  240 (454)
                      .+.+.......+... ...+|...             ++.+.++|     ++||+.||++|||+. |+++||||..    
T Consensus       219 ~~~~~~~~~~~i~~~-~~~~p~~~-------------s~~~~~li-----~~lL~~dp~~R~~~~~~i~~hp~f~~----  275 (345)
T 1xjd_A          219 HGQDEEELFHSIRMD-NPFYPRWL-------------EKEAKDLL-----VKLFVREPEKRLGVRGDIRQHPLFRE----  275 (345)
T ss_dssp             CCSSHHHHHHHHHHC-CCCCCTTS-------------CHHHHHHH-----HHHSCSSGGGSBTTBSCGGGSGGGTT----
T ss_pred             CCCCHHHHHHHHHhC-CCCCCccc-------------CHHHHHHH-----HHHhcCCHhHcCCChHHHHcCccccC----
Confidence            444444444444322 33344432             36778888     999999999999998 9999999974    


Q ss_pred             CCCccCccccccCCCCCC
Q psy7309         241 GLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       241 ~~~~~~~~~ll~~~~~~~  258 (454)
                          ++|+.+......|+
T Consensus       276 ----~~w~~l~~~~~~~p  289 (345)
T 1xjd_A          276 ----INWEELERKEIDPP  289 (345)
T ss_dssp             ----CCHHHHHTTCSCC-
T ss_pred             ----CCHHHHhhCCCCCC
Confidence                56777766555444


No 32 
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1
Probab=99.96  E-value=1.8e-29  Score=260.02  Aligned_cols=154  Identities=16%  Similarity=0.158  Sum_probs=141.1

Q ss_pred             CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-----ccccEEEEcCCCCeEeeC
Q psy7309         292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-----SETTASVMTRGGSIVTLP  366 (454)
Q Consensus       292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-----~~~~~~~~d~~G~~~~Lr  366 (454)
                      +..+++.|++       |..+.++++|++.++++|++|||.+|.||+||+.+++..+     .++||+|.|++|+.++||
T Consensus         7 ~~~~G~~d~l-------P~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~~~em~~~~D~~g~~l~Lr   79 (434)
T 1wu7_A            7 EKIRGFRDFY-------PEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLI   79 (434)
T ss_dssp             CCCTTCCCBC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEEC
T ss_pred             CCCCCCCcCC-------HHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHhhhccCCccccceEEEECCCCCEEEeC
Confidence            4556677777       8889999999999999999999999999999999998653     368999999999999999


Q ss_pred             CCCCHHHHHHHHHcCC-CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCC-c
Q psy7309         367 HDLRIPFARYLAQNGS-IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGN-I  444 (454)
Q Consensus       367 ~d~T~p~aR~~a~~~~-~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~-~  444 (454)
                      ||+|+|+||++++++. ..|+|+||+|+|||+++++.||+|||+|+|+|++|.+ +..+|+|++.++.++|+.+|+++ +
T Consensus        80 Pd~t~~~aR~~~~~~~~~lP~rl~~~g~vfR~erp~~gR~REF~Q~d~ei~g~~-~~~ad~E~i~~~~~~l~~lgl~~~~  158 (434)
T 1wu7_A           80 PEATPSTVRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSD-SPEADAEVIALASSILDRLGLQDIY  158 (434)
T ss_dssp             SCSHHHHHHHHTTCTTCCSSEEEEECCEEECCCCSCSSCCSEEEEEEEEEESCC-SHHHHHHHHHHHHHHHHHTTTTTSE
T ss_pred             CCChHHHHHHHHhcCCCCCCeEEEEEcCeecCCCCCCCCccceEEeeEEEEcCC-ChHhhHHHHHHHHHHHHHcCCCCce
Confidence            9999999999997742 3799999999999999999999999999999999998 88899999999999999999987 9


Q ss_pred             EEEcCcccc
Q psy7309         445 SFAPHPRVL  453 (454)
Q Consensus       445 ~i~i~~~~~  453 (454)
                      .|++||+++
T Consensus       159 ~i~l~~~g~  167 (434)
T 1wu7_A          159 EIRINSRKI  167 (434)
T ss_dssp             EEEEEEHHH
T ss_pred             EEEECChhh
Confidence            999999863


No 33 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96  E-value=3.1e-30  Score=258.78  Aligned_cols=171  Identities=26%  Similarity=0.337  Sum_probs=133.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+...                         ...
T Consensus       121 ~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~-------------------------~~~  175 (353)
T 2i0e_A          121 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI-------------------------WDG  175 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC-------------------------CTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc-------------------------cCC
Confidence            4688999999999999999999999999999999999999999999987431                         112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  |+||+              ||++|||++|++               |+
T Consensus       176 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~G~~---------------Pf  221 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIA---YQPYGKSV--DWWAF--------------GVLLYEMLAGQA---------------PF  221 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHT---TCCBSTHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             cccccccCCccccChhhhc---CCCcCCcc--cccch--------------HHHHHHHHcCCC---------------CC
Confidence            2345578999999999998   67788888  99999              999999876553               44


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCccccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~f~~  236 (454)
                      .+.+.......+.. ....+|...             ++.+.++|     ++||+.||.+||+     ++|+++||||..
T Consensus       222 ~~~~~~~~~~~i~~-~~~~~p~~~-------------s~~~~~li-----~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          222 EGEDEDELFQSIME-HNVAYPKSM-------------SKEAVAIC-----KGLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             CCSSHHHHHHHHHH-CCCCCCTTS-------------CHHHHHHH-----HHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             CCCCHHHHHHHHHh-CCCCCCCCC-------------CHHHHHHH-----HHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            44444444444442 233444432             36778888     9999999999995     699999999973


Q ss_pred             CCCCCCCccCccccccCCCCCC
Q psy7309         237 GSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       237 ~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                              ++|+.+......||
T Consensus       283 --------~~w~~l~~~~~~~p  296 (353)
T 2i0e_A          283 --------IDWEKLERKEIQPP  296 (353)
T ss_dssp             --------CCHHHHHTTCSCCS
T ss_pred             --------CCHHHHHhCCCCCC
Confidence                    67777766555444


No 34 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.96  E-value=3.7e-30  Score=267.45  Aligned_cols=187  Identities=27%  Similarity=0.351  Sum_probs=123.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+....                          .
T Consensus       164 ~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~--------------------------~  217 (464)
T 3ttj_A          164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------------------------S  217 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-------------------------------C
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC--------------------------C
Confidence            46789999999999999999999999999999999999999999999985421                          2


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      ...+..+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|++     ...+++..++..
T Consensus       218 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~ell~g~~pF~g~~~~~~~~~i~~~  278 (464)
T 3ttj_A          218 FMMTPYVVTRYYRAPEVIL---GMGYKENV--DIWSV--------------GCIMGEMVRHKILFPGRDYIDQWNKVIEQ  278 (464)
T ss_dssp             CCC----CCCTTCCHHHHT---TCCCCTTH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             cccCCCcccccccCHHHHc---CCCCCHHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            3345679999999999998   67889888  99999              999999776554     334555555554


Q ss_pred             cCCCCCCc--hhhhhhhhhccC----CCCCCCcccccc--ccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhh
Q psy7309         157 ENGPSTGS--NVQKSLQKFQKS----PPSVYREWRSSF--EWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQN  228 (454)
Q Consensus       157 ~~~p~~~~--~~~~~~~~~~~~----~~~~~p~~~~~~--~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~  228 (454)
                      .+.|....  ........+...    ....++...+..  ..........++.+.+||     ++||+.||++|||++|+
T Consensus       279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl-----~~mL~~dP~~R~ta~e~  353 (464)
T 3ttj_A          279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL-----SKMLVIDPAKRISVDDA  353 (464)
T ss_dssp             HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHH-----HHHSCSSTTTSCCHHHH
T ss_pred             cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHH-----HHHcCCChhhCCCHHHH
Confidence            45443221  011111111111    111111111000  000000011135567777     99999999999999999


Q ss_pred             hcCcccccCC
Q psy7309         229 LCQPISLEGS  238 (454)
Q Consensus       229 l~hp~f~~~~  238 (454)
                      |+||||....
T Consensus       354 L~Hp~~~~~~  363 (464)
T 3ttj_A          354 LQHPYINVWY  363 (464)
T ss_dssp             HTSTTTGGGC
T ss_pred             hcChhhhhcc
Confidence            9999998644


No 35 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.96  E-value=4.9e-30  Score=249.40  Aligned_cols=183  Identities=24%  Similarity=0.322  Sum_probs=123.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|....                         ...
T Consensus       101 ~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~-------------------------~~~  155 (292)
T 3o0g_A          101 EIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFG-------------------------IPV  155 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------------------------SCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecC-------------------------Ccc
Confidence            4688999999999999999999999999999999999999999999997542                         112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC-ch-----hhHHHHHHHhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD-RP-----KTLEELKHNIR  155 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~-~~-----~~~~~l~~~i~  155 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|+|+++ .+     .....+.....
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~l~~~~~p~~~~~~~~~~~~~i~~  217 (292)
T 3o0g_A          156 RCYSAEVVTLWYRPPDVLFG--AKLYSTSI--DMWSA--------------GCIFAELANAGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHTT--CSCCCTHH--HHHHH--------------HHHHHHHTTTSCCSCCCSSHHHHHHHHHH
T ss_pred             ccccCCccccCCcChHHHcC--CCCcCchH--HHHHH--------------HHHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence            33455688999999999871  23478888  99999              9999997743 33     12223333333


Q ss_pred             hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      ..+.|.... +......-........+..   ..+.... ...++.+.+||     ++||+.||++|||++|+|+||||.
T Consensus       218 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~li-----~~~L~~dP~~R~t~~e~l~hp~f~  287 (292)
T 3o0g_A          218 LLGTPTEEQ-WPSMTKLPDYKPYPMYPAT---TSLVNVV-PKLNATGRDLL-----QNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             HHCCCCTTT-CTTGGGSTTCCCCCCCCTT---CCCTTTS-TTCCHHHHHHH-----HHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HhCCCChhh-hhhhcccccccccccccCC---cchhhcc-cccChHHHHHH-----HHHhccChhhCCCHHHHhcCcccc
Confidence            233332221 1111100000011111111   0111111 12346677888     999999999999999999999998


Q ss_pred             cC
Q psy7309         236 EG  237 (454)
Q Consensus       236 ~~  237 (454)
                      ..
T Consensus       288 ~~  289 (292)
T 3o0g_A          288 DF  289 (292)
T ss_dssp             TC
T ss_pred             cC
Confidence            54


No 36 
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=99.96  E-value=2.8e-29  Score=259.92  Aligned_cols=154  Identities=14%  Similarity=0.119  Sum_probs=138.7

Q ss_pred             CCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc--------ccccEEEEcCC-CC
Q psy7309         291 NQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT--------SETTASVMTRG-GS  361 (454)
Q Consensus       291 ~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~--------~~~~~~~~d~~-G~  361 (454)
                      -+..+++.|++       |..+.++++|++.++++|++|||.+|.||+||+.+++..+        .++||+|.|++ |+
T Consensus        32 ~~~~~G~~d~l-------P~~~~~~~~l~~~i~~~~~~~Gy~eI~tP~le~~el~~~~~G~~~d~~~~~my~~~D~~~g~  104 (467)
T 4e51_A           32 LTGVKGMNDIL-------PQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALNGE  104 (467)
T ss_dssp             CCCCTTCCCBC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTCTTSHHHHHTCCEEECTTTCC
T ss_pred             CCCCCCceeeC-------HHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhccCCcccccccceEEEecCCCCC
Confidence            45667788888       8888899999999999999999999999999999987543        25899999999 99


Q ss_pred             eEeeCCCCCHHHHHHHHHcCC--CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhC
Q psy7309         362 IVTLPHDLRIPFARYLAQNGS--IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRF  439 (454)
Q Consensus       362 ~~~Lr~d~T~p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~  439 (454)
                      .++||||+|+|+||+++.+..  ..|+|+||+|+|||+++++.||+|||+|+|+|+||.+ +..+|+|+|.++.++|+.+
T Consensus       105 ~l~LRPd~t~~~ar~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~ReF~Q~d~ei~g~~-~~~adaEvi~l~~~~l~~l  183 (467)
T 4e51_A          105 NLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFA-GPDADAEIVMMCQRLWEDL  183 (467)
T ss_dssp             EEEECSCSHHHHHHHHHHTTTTTTSCEEEEEEEEEECCCCC---CCSEEEEEEEEEETCC-CSHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCcccHHHHHHHHHHcccccCCCEEEEEEccEEccCCCCCCCcCceEEEEEEEEeCC-ChHHHHHHHHHHHHHHHHc
Confidence            999999999999999987642  4699999999999999999999999999999999998 8899999999999999999


Q ss_pred             CCCCcEEEcCccc
Q psy7309         440 NYGNISFAPHPRV  452 (454)
Q Consensus       440 ~~~~~~i~i~~~~  452 (454)
                      |+++++|+|||++
T Consensus       184 Gl~~~~i~in~~g  196 (467)
T 4e51_A          184 GLTGIKLEINSLG  196 (467)
T ss_dssp             TCCCEEEEEEECC
T ss_pred             CCCceEEEEeCCC
Confidence            9999999999986


No 37 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.96  E-value=4.1e-30  Score=251.81  Aligned_cols=180  Identities=25%  Similarity=0.325  Sum_probs=121.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+...                          ..
T Consensus       120 ~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~--------------------------~~  173 (308)
T 3g33_A          120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--------------------------YQ  173 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTST--------------------------TC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccC--------------------------CC
Confidence            4688999999999999999999999999999999999999999999997542                          12


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|+|+++++.     ....+...+..
T Consensus       174 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~~l~~g~~pf~~~~~~~~~~~i~~~  234 (308)
T 3g33_A          174 MALTPVVVTLWYRAPEVLL---QSTYATPV--DMWSV--------------GCIFAEMFRRKPLFCGNSEADQLGKIFDL  234 (308)
T ss_dssp             CCSGGGGCCCSSCCHHHHH---TSCCCSTH--HHHHH--------------HHHHHHTTTSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccCCccccccccCchHHc---CCCCCchH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            2345678999999999997   66788888  99999              9999998876652     22222222222


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      ...|....... ...    .....++...+ ..+.... ...++.+.+||     .+||+.||++|||+.|+|+||||..
T Consensus       235 ~~~~~~~~~~~-~~~----~~~~~~~~~~~-~~~~~~~-~~~~~~~~~li-----~~~L~~dP~~R~t~~e~l~h~~~~~  302 (308)
T 3g33_A          235 IGLPPEDDWPR-DVS----LPRGAFPPRGP-RPVQSVV-PEMEESGAQLL-----LEMLTFNPHKRISAFRALQHSYLHK  302 (308)
T ss_dssp             HCCCCTTTSCS-SCS----SCGGGSCCCCC-CCHHHHS-CSCCHHHHHHH-----HHHTCSSTTTSCCHHHHHTSTTC--
T ss_pred             hCCCChhhccc-hhh----ccccccCCCCC-CcHHHhC-ccccHHHHHHH-----HHHhcCCCccCCCHHHHhcCccccC
Confidence            22222111000 000    00000110000 0011111 12336667787     9999999999999999999999986


Q ss_pred             CC
Q psy7309         237 GS  238 (454)
Q Consensus       237 ~~  238 (454)
                      ..
T Consensus       303 ~~  304 (308)
T 3g33_A          303 DE  304 (308)
T ss_dssp             --
T ss_pred             CC
Confidence            43


No 38 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96  E-value=4.2e-30  Score=257.20  Aligned_cols=161  Identities=29%  Similarity=0.384  Sum_probs=118.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.....                        ...
T Consensus       108 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~------------------------~~~  163 (347)
T 3zgw_A          108 EETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG------------------------NKD  163 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccC------------------------CCC
Confidence            46889999999999999999999999999999999999999999999875421                        112


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|+|||++.   +..| +.++  ||||+              ||++|+|++|..               |
T Consensus       164 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~~--DiwSl--------------G~il~ell~g~~---------------P  209 (347)
T 3zgw_A          164 YHLQTCCGSLAYAAPELIQ---GKSYLGSEA--DVWSM--------------GILLYVLMCGFL---------------P  209 (347)
T ss_dssp             --------CGGGCCHHHHT---TC---CCHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             ccccccCCccCccCHHHHc---CCCCCCcHh--HHHHH--------------HHHHHHHHHCCC---------------C
Confidence            2344568999999999987   4454 7778  99999              999999766543               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +.+.+......++... ...+|...             ++...+||     .+||+.||.+|||++|+++||||.....
T Consensus       210 f~~~~~~~~~~~i~~~-~~~~p~~~-------------s~~~~~li-----~~~L~~dP~~Rps~~eil~hp~~~~~~~  269 (347)
T 3zgw_A          210 FDDDNVMALYKKIMRG-KYDVPKWL-------------SPSSILLL-----QQMLQVDPKKRISMKNLLNHPWIMQDYN  269 (347)
T ss_dssp             SCCSSHHHHHHHHHHT-CCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHTCHHHHTTTC
T ss_pred             CCCCCHHHHHHHHHcC-CCCCCCCC-------------CHHHHHHH-----HHHcccCHhHCcCHHHHhcCcchhcCCC
Confidence            4444444444444422 33344432             26677888     9999999999999999999999987654


No 39 
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=99.96  E-value=7.2e-29  Score=254.61  Aligned_cols=153  Identities=12%  Similarity=0.197  Sum_probs=139.7

Q ss_pred             CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-c-------cccEEEEcCCCCeE
Q psy7309         292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-S-------ETTASVMTRGGSIV  363 (454)
Q Consensus       292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-~-------~~~~~~~d~~G~~~  363 (454)
                      +..+++.|++       |..+.++++|++.++++|++|||.+|.||+||+.+++..+ +       +++|+|.|++|+.+
T Consensus         4 ~~~~G~~d~l-------P~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l   76 (421)
T 1h4v_B            4 RAVRGTKDLF-------GKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSL   76 (421)
T ss_pred             CCCCCCCCcC-------HHHHHHHHHHHHHHHHHHHHcCCEEecccccccHHHhhhccCCcccccccceEEEECCCCCEE
Confidence            3455677777       8888899999999999999999999999999999998654 1       48999999999999


Q ss_pred             eeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Q psy7309         364 TLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFN  440 (454)
Q Consensus       364 ~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~  440 (454)
                      +||||+|+|+||+++++..   ..|+|+||+|+|||+++++.||+|||+|+|+|++|.+ +..+|+|++.++.++|+.+|
T Consensus        77 ~Lrpd~t~~~ar~~~~~~~~~~~lP~rl~~~g~vfR~e~p~~gR~REf~Q~g~e~~g~~-~~~ad~e~i~~~~~~l~~lg  155 (421)
T 1h4v_B           77 TLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSE-NPILDAEAVVLLYECLKELG  155 (421)
T ss_pred             eeCCcchHHHHHHHHhccccccCCCeEEEEecCeecCCCCCCCCcccEEEccEEEECCC-ChhhhHHHHHHHHHHHHHcC
Confidence            9999999999999986531   4799999999999999999999999999999999998 88999999999999999999


Q ss_pred             CCCcEEEcCccc
Q psy7309         441 YGNISFAPHPRV  452 (454)
Q Consensus       441 ~~~~~i~i~~~~  452 (454)
                      ++++.|.+||++
T Consensus       156 l~~~~i~i~~~g  167 (421)
T 1h4v_B          156 LRRLKVKLSSVG  167 (421)
T ss_pred             CCceEEEEcCCC
Confidence            999999999975


No 40 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.96  E-value=1.4e-29  Score=260.68  Aligned_cols=204  Identities=25%  Similarity=0.318  Sum_probs=125.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+............+....   ...........
T Consensus       129 ~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  205 (432)
T 3n9x_A          129 EHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN---EEPGPHNKNLK  205 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccccccccc---ccccccccchh
Confidence            468899999999999999999999999999999999999999999999865321110000000000   00000000112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC-----------chh-----
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD-----------RPK-----  145 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~-----------~~~-----  145 (454)
                      ...+..+||+.|+|||++..  ...|+.++  ||||+              ||++|||++|           .+.     
T Consensus       206 ~~~~~~~gt~~Y~APE~~~~--~~~~~~~~--DiwSl--------------G~il~ell~g~~p~~~~~~~~~p~f~g~~  267 (432)
T 3n9x_A          206 KQLTSHVVTRWYRAPELILL--QENYTKSI--DIWST--------------GCIFAELLNMLQSHINDPTNRFPLFPGSS  267 (432)
T ss_dssp             -----CCCCCTTCCHHHHTT--CSCCCTHH--HHHHH--------------HHHHHHHHTTCTTTCSSGGGCCCSCCCSC
T ss_pred             ccccCCCCCccccCHHHHhc--CCCCCccc--ccchH--------------HHHHHHHHhcccccccccccccccCCCcc
Confidence            34567899999999999752  46688888  99999              9999997742           221     


Q ss_pred             -----------------hHHHHHHHhhhcCCCCCCc-------hhhhhhhhhccCCCCCCCccccccccccccccccccc
Q psy7309         146 -----------------TLEELKHNIRRENGPSTGS-------NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNF  201 (454)
Q Consensus       146 -----------------~~~~l~~~i~~~~~p~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  201 (454)
                                       ..+++..++...+.|....       ........+......         .+....+ ..++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~s~~  337 (432)
T 3n9x_A          268 CFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPI---------NLKQKYP-SISDD  337 (432)
T ss_dssp             SCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCC---------CHHHHST-TSCHH
T ss_pred             ccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCC---------CHHHHCC-CCCHH
Confidence                             2344544444444443211       111111111111111         1111111 12477


Q ss_pred             hhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCCC
Q psy7309         202 QHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSSG  241 (454)
Q Consensus       202 ~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~~  241 (454)
                      +.+||     ++||+.||++|||++|+|+||||.......
T Consensus       338 ~~dLl-----~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~  372 (432)
T 3n9x_A          338 GINLL-----ESMLKFNPNKRITIDQALDHPYLKDVRKKK  372 (432)
T ss_dssp             HHHHH-----HHHSCSSTTTSCCHHHHHTCGGGTTTCCTT
T ss_pred             HHHHH-----HHHhcCCcccCCCHHHHhcChhhhhccCcc
Confidence            77888     999999999999999999999999876553


No 41 
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A*
Probab=99.96  E-value=5.2e-29  Score=255.83  Aligned_cols=153  Identities=12%  Similarity=0.142  Sum_probs=139.9

Q ss_pred             CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-c-------cccEEEEcCCCCeE
Q psy7309         292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-S-------ETTASVMTRGGSIV  363 (454)
Q Consensus       292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-~-------~~~~~~~d~~G~~~  363 (454)
                      +..+++.|++       |..+.++++|++.++++|++|||++|.||+||+.+++..+ +       +++|+|.|++|+.+
T Consensus         5 ~~~~G~~d~l-------P~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l   77 (423)
T 1htt_A            5 QAIRGMNDYL-------PGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSL   77 (423)
T ss_dssp             CCCTTCCCBC-------HHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCSSSHHHHHTCEEEECTTSCEE
T ss_pred             CCCCCccccC-------HHHHHHHHHHHHHHHHHHHHcCCEEecccccCHHHHHhhccCCchhhhhhheEEEEcCCCCEE
Confidence            4556677777       8889999999999999999999999999999999998543 1       48999999999999


Q ss_pred             eeCCCCCHHHHHHHHHcCC--CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCC
Q psy7309         364 TLPHDLRIPFARYLAQNGS--IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNY  441 (454)
Q Consensus       364 ~Lr~d~T~p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~  441 (454)
                      +||||+|+|+||+++++..  ..|+|+||+|+|||+++++.||+|||+|+|+|++|.+ +..+|+|++.++.++|+.+|+
T Consensus        78 ~Lrpd~t~~~aR~~~~~~~~~~~P~rl~~~g~vfR~e~p~~gR~Ref~Q~d~e~~g~~-~~~ad~e~i~~~~~~l~~lgl  156 (423)
T 1htt_A           78 TLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQ-GPDIDAELIMLTARWWRALGI  156 (423)
T ss_dssp             EECSCSHHHHHHHHHHHTCSTTCCEEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCC-SHHHHHHHHHHHHHHHHHHTC
T ss_pred             EeCCCchHHHHHHHHhcccccCCCeEEEEEcCEecCCCCCCCccceeEEeeEEEECCC-CchhhHHHHHHHHHHHHHCCC
Confidence            9999999999999987642  5799999999999999999999999999999999998 888999999999999999999


Q ss_pred             -CCcEEEcCccc
Q psy7309         442 -GNISFAPHPRV  452 (454)
Q Consensus       442 -~~~~i~i~~~~  452 (454)
                       +++.|.+||++
T Consensus       157 ~~~~~i~i~~~g  168 (423)
T 1htt_A          157 SEHVTLELNSIG  168 (423)
T ss_dssp             GGGCEEEEEECC
T ss_pred             CCCcEEEEcCCC
Confidence             88999999975


No 42 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.96  E-value=5.4e-30  Score=250.39  Aligned_cols=162  Identities=25%  Similarity=0.409  Sum_probs=121.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++|++.||+|||++||+||||||+|||++.++.+||+|||+|.....                         ..
T Consensus       116 ~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-------------------------~~  170 (297)
T 3fxz_A          116 GQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-------------------------EQ  170 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS-------------------------TT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCC-------------------------cc
Confidence            36889999999999999999999999999999999999999999999875421                         12


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|+.               |+
T Consensus       171 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~---------------pf  216 (297)
T 3fxz_A          171 SKRSTMVGTPYWMAPEVVT---RKAYGPKV--DIWSL--------------GIMAIEMIEGEP---------------PY  216 (297)
T ss_dssp             CCBCCCCSCGGGCCHHHHH---CSCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             cccCCccCCcCccChhhhc---CCCCCcHH--HHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            2344568999999999998   67788888  99999              999999776554               22


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      ...........+.......+...           ...++...++|     .+||+.||++|||++|+++||||....
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~dp~~Rps~~ell~h~~~~~~~  277 (297)
T 3fxz_A          217 LNENPLRALYLIATNGTPELQNP-----------EKLSAIFRDFL-----NRCLEMDVEKRGSAKELLQHQFLKIAK  277 (297)
T ss_dssp             TTSCHHHHHHHHHHHCSCCCSCG-----------GGSCHHHHHHH-----HHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             CCCCHHHHHHHHHhCCCCCCCCc-----------cccCHHHHHHH-----HHHccCChhHCcCHHHHhhChhhcccC
Confidence            22222222222111111111111           11236667888     999999999999999999999998643


No 43 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96  E-value=8.5e-30  Score=254.70  Aligned_cols=178  Identities=24%  Similarity=0.280  Sum_probs=128.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...                         ...
T Consensus       110 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~-------------------------~~~  164 (345)
T 3a8x_A          110 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-------------------------RPG  164 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSC-------------------------CTT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecccccccc-------------------------CCC
Confidence            4688999999999999999999999999999999999999999999997431                         112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|+++...        ...+.
T Consensus       165 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~pf~~--------~~~~~  217 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILR---GEDYGFSV--DWWAL--------------GVLMFEMMAGRSPFDI--------VGSSD  217 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSCTTTT--------TTC--
T ss_pred             CcccccCCCccccCccccC---CCCCChHH--hHHHH--------------HHHHHHHHhCCCCcCC--------ccccc
Confidence            2345578999999999998   67788888  99999              9999997766542210        00000


Q ss_pred             -CC-chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh------hhhhcCcc
Q psy7309         162 -TG-SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS------EQNLCQPI  233 (454)
Q Consensus       162 -~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta------~e~l~hp~  233 (454)
                       .. .........+. .....+|...             ++.+.++|     ++||+.||++|||+      +|+++|||
T Consensus       218 ~~~~~~~~~~~~~i~-~~~~~~p~~~-------------s~~~~~li-----~~lL~~dP~~R~~~~~~~~~~~i~~hp~  278 (345)
T 3a8x_A          218 NPDQNTEDYLFQVIL-EKQIRIPRSL-------------SVKAASVL-----KSFLNKDPKERLGCHPQTGFADIQGHPF  278 (345)
T ss_dssp             -----CHHHHHHHHH-HCCCCCCTTS-------------CHHHHHHH-----HHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred             ccccccHHHHHHHHH-cCCCCCCCCC-------------CHHHHHHH-----HHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence             00 11111222222 2233344432             36778888     99999999999996      79999999


Q ss_pred             cccCCCCCCCccCccccccCCCCCC
Q psy7309         234 SLEGSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       234 f~~~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                      |..        ++|+.+.+....|+
T Consensus       279 f~~--------~~w~~~~~~~~~~p  295 (345)
T 3a8x_A          279 FRN--------VDWDMMEQKQVVPP  295 (345)
T ss_dssp             GTT--------CCHHHHHTTCSCCS
T ss_pred             cCC--------CCHHHHHhCCCCCC
Confidence            973        56776666555444


No 44 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.96  E-value=9.2e-30  Score=253.64  Aligned_cols=159  Identities=26%  Similarity=0.344  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....                          .
T Consensus       108 ~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~--------------------------~  161 (336)
T 3h4j_B          108 DEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD--------------------------G  161 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT--------------------------S
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccC--------------------------C
Confidence            46889999999999999999999999999999999999999999999975421                          2


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|+|||++.   +..| +.++  ||||+              ||++|+|++|+.               |
T Consensus       162 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~~--Diwsl--------------G~il~~ll~g~~---------------P  207 (336)
T 3h4j_B          162 NFLKTSCGSPNYAAPEVIN---GKLYAGPEV--DVWSC--------------GIVLYVMLVGRL---------------P  207 (336)
T ss_dssp             BTTCCCTTSTTTSCGGGSC---CSGGGCHHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             cccccccCCcCcCCHHHHc---CCCCCCCcc--chhHH--------------HHHHHHHHhCCC---------------C
Confidence            2334568999999999997   4555 5677  99999              999999776543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +.+.........+. .....+|..             .++.+.+||     ++||+.||.+|||++|+++||||.....
T Consensus       208 f~~~~~~~~~~~i~-~~~~~~p~~-------------~s~~~~~li-----~~~L~~dP~~Rpt~~eil~hp~~~~~~~  267 (336)
T 3h4j_B          208 FDDEFIPNLFKKVN-SCVYVMPDF-------------LSPGAQSLI-----RRMIVADPMQRITIQEIRRDPWFNVNLP  267 (336)
T ss_dssp             SBCSSSTTCBCCCC-SSCCCCCTT-------------SCHHHHHHH-----HTTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             CCCccHHHHHHHHH-cCCCCCccc-------------CCHHHHHHH-----HHHcCCChhHCcCHHHHHhChhhccCCc
Confidence            33332222222222 112222222             236778888     9999999999999999999999987654


No 45 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.96  E-value=8e-30  Score=252.06  Aligned_cols=168  Identities=30%  Similarity=0.360  Sum_probs=131.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|+...                            
T Consensus       106 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~----------------------------  157 (318)
T 1fot_A          106 PVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP----------------------------  157 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECS----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecC----------------------------
Confidence            3578899999999999999999999999999999999999999999997432                            


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  |+||+              ||++|||++|.+               |+
T Consensus       158 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~---------------pf  203 (318)
T 1fot_A          158 DVTYTLCGTPDYIAPEVVS---TKPYNKSI--DWWSF--------------GILIYEMLAGYT---------------PF  203 (318)
T ss_dssp             SCBCCCCSCTTTCCHHHHT---TCCBCTTH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             CccccccCCccccCHhHhc---CCCCCccc--chhhh--------------HHHHHHHHhCCC---------------CC
Confidence            1223468999999999998   67788888  99999              999999876543               44


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~  236 (454)
                      .+.+......++... ...+|...             ++.+.++|     .+||+.||++||     |++|+++||||..
T Consensus       204 ~~~~~~~~~~~i~~~-~~~~p~~~-------------~~~~~~li-----~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          204 YDSNTMKTYEKILNA-ELRFPPFF-------------NEDVKDLL-----SRLITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             CCSSHHHHHHHHHHC-CCCCCTTS-------------CHHHHHHH-----HHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             CCCCHHHHHHHHHhC-CCCCCCCC-------------CHHHHHHH-----HHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence            444444444443322 23344332             26778888     999999999999     9999999999974


Q ss_pred             CCCCCCCccCccccccCCCCCC
Q psy7309         237 GSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       237 ~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                              ++|+.+......||
T Consensus       265 --------~~~~~~~~~~~~~p  278 (318)
T 1fot_A          265 --------VVWEKLLSRNIETP  278 (318)
T ss_dssp             --------CCHHHHHTTCSCCS
T ss_pred             --------CCHHHHHhCCCCCC
Confidence                    56777766554443


No 46 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.96  E-value=8.3e-30  Score=250.70  Aligned_cols=184  Identities=25%  Similarity=0.355  Sum_probs=122.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+....                         ..
T Consensus       119 ~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~-------------------------~~  173 (311)
T 3niz_A          119 SQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGI-------------------------PV  173 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS-------------------------CC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCC-------------------------Cc
Confidence            36889999999999999999999999999999999999999999999985431                         12


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|+|++|+++     ..+.+......
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~ll~g~~pf~~~~~~~~~~~i~~~  235 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMG--SKKYSTSV--DIWSI--------------GCIFAEMITGKPLFPGVTDDDQLPKIFSI  235 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTT--CCSCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSTTTHHHHHHHH
T ss_pred             ccccCCcccCCcCCHHHhcC--CCCCCchH--HhHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            23445688999999999871  35678888  99999              9998887665531     11122222222


Q ss_pred             cCCCCCCc-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         157 ENGPSTGS-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       157 ~~~p~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      .+.|.... .....+..+.......+..    ..|....+. .++++.+||     ++||+.||++|||++|+|+||||+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~li-----~~~L~~dP~~Rpt~~ell~hp~f~  305 (311)
T 3niz_A          236 LGTPNPREWPQVQELPLWKQRTFQVFEK----KPWSSIIPG-FCQEGIDLL-----SNMLCFDPNKRISARDAMNHPYFK  305 (311)
T ss_dssp             HCCCCTTTSGGGTTSHHHHSCCCCCCCC----CCHHHHSTT-CCHHHHHHH-----HHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             HCCCChHHhhhhhccchhhhcccccccC----CcHHHhCcc-cCHHHHHHH-----HHHcCCChhHCCCHHHHhcCcccc
Confidence            22222211 1111111111111111111    123222222 236677788     999999999999999999999998


Q ss_pred             cCC
Q psy7309         236 EGS  238 (454)
Q Consensus       236 ~~~  238 (454)
                      ...
T Consensus       306 ~~~  308 (311)
T 3niz_A          306 DLD  308 (311)
T ss_dssp             TSC
T ss_pred             cCC
Confidence            643


No 47 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.96  E-value=1.3e-29  Score=245.93  Aligned_cols=181  Identities=25%  Similarity=0.371  Sum_probs=120.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....                         ..
T Consensus       100 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-------------------------~~  154 (288)
T 1ob3_A          100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGI-------------------------PV  154 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCc-------------------------cc
Confidence            35789999999999999999999999999999999999999999999986531                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|||++|++.     ..+.+...+..
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~l~~g~~pf~~~~~~~~~~~~~~~  216 (288)
T 1ob3_A          155 RKYTHEIVTLWYRAPDVLMG--SKKYSTTI--DIWSV--------------GCIFAEMVNGTPLFPGVSEADQLMRIFRI  216 (288)
T ss_dssp             -------CCCTTCCHHHHTT--CCSCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccccccccccccCchheeC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            22345688999999999861  34578888  99999              9999997765541     22333333332


Q ss_pred             cCCCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         157 ENGPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       157 ~~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      .+.|..... .......+.    ..++.. ....|+..... .++...+||     ++||+.||++|||++|+|+||||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~-~~~~~~~li-----~~~L~~dP~~Rpt~~e~l~hp~f~  285 (288)
T 1ob3_A          217 LGTPNSKNWPNVTELPKYD----PNFTVY-EPLPWESFLKG-LDESGIDLL-----SKMLKLDPNQRITAKQALEHAYFK  285 (288)
T ss_dssp             HCCCCTTTSTTGGGSTTCC----TTCCCC-CCCCGGGTCCS-CCHHHHHHH-----HHHTCSSTTTSCCHHHHHTSGGGG
T ss_pred             HCCCChhhchhhhcccccc----cccccc-cCccHHHHhhh-cCHHHHHHH-----HHHcCCCcccCCCHHHHhcCcchh
Confidence            232222111 000000000    011110 01223332222 336667888     999999999999999999999998


Q ss_pred             c
Q psy7309         236 E  236 (454)
Q Consensus       236 ~  236 (454)
                      .
T Consensus       286 ~  286 (288)
T 1ob3_A          286 E  286 (288)
T ss_dssp             C
T ss_pred             h
Confidence            5


No 48 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96  E-value=1.2e-29  Score=256.46  Aligned_cols=171  Identities=26%  Similarity=0.386  Sum_probs=133.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+...                         ...
T Consensus       139 ~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~-------------------------~~~  193 (373)
T 2r5t_A          139 PRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI-------------------------EHN  193 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB-------------------------CCC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccc-------------------------cCC
Confidence            3678899999999999999999999999999999999999999999998532                         112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  |+||+              ||++|||++|.+               |+
T Consensus       194 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~G~~---------------Pf  239 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLH---KQPYDRTV--DWWCL--------------GAVLYEMLYGLP---------------PF  239 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             CccccccCCccccCHHHhC---CCCCCchh--hhHHH--------------HHHHHHHHcCCC---------------CC
Confidence            2345678999999999998   67788888  99999              999999876543               44


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh----hhhhcCcccccC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS----EQNLCQPISLEG  237 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta----~e~l~hp~f~~~  237 (454)
                      .+.+......++... ...++...             ++.+.++|     ++||+.||.+||++    +|+++||||.. 
T Consensus       240 ~~~~~~~~~~~i~~~-~~~~~~~~-------------~~~~~~li-----~~lL~~dp~~R~~~~~~~~~i~~h~~f~~-  299 (373)
T 2r5t_A          240 YSRNTAEMYDNILNK-PLQLKPNI-------------TNSARHLL-----EGLLQKDRTKRLGAKDDFMEIKSHVFFSL-  299 (373)
T ss_dssp             CCSBHHHHHHHHHHS-CCCCCSSS-------------CHHHHHHH-----HHHTCSSGGGSTTTTTTHHHHHTSGGGTT-
T ss_pred             CCCCHHHHHHHHHhc-ccCCCCCC-------------CHHHHHHH-----HHHcccCHHhCCCCCCCHHHHhCCccccC-
Confidence            444444444444322 23333332             26778888     99999999999997    58999999973 


Q ss_pred             CCCCCCccCccccccCCCCCC
Q psy7309         238 SSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       238 ~~~~~~~~~~~~ll~~~~~~~  258 (454)
                             ++|+++......|+
T Consensus       300 -------~~w~~l~~~~~~pp  313 (373)
T 2r5t_A          300 -------INWDDLINKKITPP  313 (373)
T ss_dssp             -------CCHHHHHTTCSCCS
T ss_pred             -------CCHHHHHhCCCCCC
Confidence                   67888876655554


No 49 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.96  E-value=6.8e-30  Score=258.89  Aligned_cols=209  Identities=23%  Similarity=0.327  Sum_probs=125.7

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      .++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+............   . ...............
T Consensus       110 ~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~  185 (388)
T 3oz6_A          110 HKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI---P-LSINENTENFDDDQP  185 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCG---G-GCCC-----------
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccc---c-ccccccccccccccc
Confidence            578899999999999999999999999999999999999999999998553210000000   0 000000000011233


Q ss_pred             CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhhc
Q psy7309          83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRRE  157 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~~  157 (454)
                      ..+..+||+.|+|||++..  ...|+.++  ||||+              ||++|||++|++     .....+..++...
T Consensus       186 ~~~~~~gt~~y~aPE~~~~--~~~~~~~~--DiwSl--------------G~il~ell~g~~pf~~~~~~~~~~~i~~~~  247 (388)
T 3oz6_A          186 ILTDYVATRWYRAPEILLG--STKYTKGI--DMWSL--------------GCILGEILCGKPIFPGSSTMNQLERIIGVI  247 (388)
T ss_dssp             ----CCCGGGGCCHHHHTT--CCCCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cccCCcccCCcCCHHHhcC--CCCCCChh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence            4566799999999999871  35788888  99999              999999777654     2344444444433


Q ss_pred             CCCCCCc-------hhhhhhhhhccCC---CCCCCcccccccccccc-----ccccccchhHHHHHHHHhhhcCCCCCCC
Q psy7309         158 NGPSTGS-------NVQKSLQKFQKSP---PSVYREWRSSFEWSTVR-----NNIKSNFQHFLILIHQQKWCLNHDPSKR  222 (454)
Q Consensus       158 ~~p~~~~-------~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~-----~~~~~~~~~~li~~~~~~~~L~~dP~~R  222 (454)
                      +.|....       ........+....   ........+  .|....     ....++.+.+||     ++||+.||++|
T Consensus       248 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~dll-----~~~L~~dP~~R  320 (388)
T 3oz6_A          248 DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFT--KWKNLLLKINPKADCNEEALDLL-----DKLLQFNPNKR  320 (388)
T ss_dssp             CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHH--HHHHHHHHHCTTCCCCHHHHHHH-----HHHCCSSGGGS
T ss_pred             CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCc--chhhhcccccccccCCHHHHHHH-----HHhhccCcccC
Confidence            3332110       0111111111000   111111100  011100     012346677888     99999999999


Q ss_pred             CChhhhhcCcccccCCCC
Q psy7309         223 PSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       223 pta~e~l~hp~f~~~~~~  240 (454)
                      ||++|+|+||||.....+
T Consensus       321 ~t~~e~l~Hp~~~~~~~~  338 (388)
T 3oz6_A          321 ISANDALKHPFVSIFHNP  338 (388)
T ss_dssp             CCHHHHTTSTTTTTTCCG
T ss_pred             CCHHHHhCCHHHHHhcCC
Confidence            999999999999875543


No 50 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.95  E-value=1.4e-29  Score=253.72  Aligned_cols=168  Identities=22%  Similarity=0.228  Sum_probs=131.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+...                            
T Consensus       141 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~----------------------------  192 (350)
T 1rdq_E          141 PHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------------------  192 (350)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECS----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceecc----------------------------
Confidence            3678999999999999999999999999999999999999999999997542                            


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|.+               |+
T Consensus       193 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~---------------Pf  238 (350)
T 1rdq_E          193 GRTWTLCGTPEALAPEIIL---SKGYNKAV--DWWAL--------------GVLIYEMAAGYP---------------PF  238 (350)
T ss_dssp             SCBCCCEECGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             CCcccccCCccccCHHHhc---CCCCCCcC--CEecc--------------cHhHhHHhhCCC---------------CC
Confidence            1233568999999999998   66788888  99999              999999776543               44


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCccccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp~f~~  236 (454)
                      .+.+......++... ...+|...             ++.+.++|     ++||+.||++||+     ++|+++||||..
T Consensus       239 ~~~~~~~~~~~i~~~-~~~~p~~~-------------~~~~~~li-----~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          239 FADQPIQIYEKIVSG-KVRFPSHF-------------SSDLKDLL-----RNLLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             CCSSHHHHHHHHHHC-CCCCCTTC-------------CHHHHHHH-----HHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             CCCCHHHHHHHHHcC-CCCCCCCC-------------CHHHHHHH-----HHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence            444444444444322 33444432             26777888     9999999999998     999999999973


Q ss_pred             CCCCCCCccCccccccCCCCCC
Q psy7309         237 GSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       237 ~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                              ++|+.+.+....||
T Consensus       300 --------~~w~~~~~~~~~~p  313 (350)
T 1rdq_E          300 --------TDWIAIYQRKVEAP  313 (350)
T ss_dssp             --------CCHHHHHTTCSCCS
T ss_pred             --------CCHHHHhhccCCCC
Confidence                    56666665544443


No 51 
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.95  E-value=1.7e-29  Score=256.96  Aligned_cols=185  Identities=25%  Similarity=0.354  Sum_probs=131.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEc-cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFID-YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++ .++.+||+|||+|+....                          
T Consensus       141 ~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~--------------------------  194 (394)
T 4e7w_A          141 LLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA--------------------------  194 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC--------------------------
Confidence            35789999999999999999999999999999999 789999999999975421                          


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhh
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIR  155 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~  155 (454)
                      .......+||+.|+|||++..  ...|+.++  ||||+              ||++|||++|++     ...+.+..++.
T Consensus       195 ~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--DiwSl--------------G~il~ell~g~~pf~~~~~~~~l~~i~~  256 (394)
T 4e7w_A          195 GEPNVSYICSRYYRAPELIFG--ATNYTTNI--DIWST--------------GCVMAELMQGQPLFPGESGIDQLVEIIK  256 (394)
T ss_dssp             TCCCCSSCSCGGGCCHHHHTT--CSSCCTHH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCcccccCcCccCHHHHcC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            223445688999999999861  34588888  99999              999999776554     23344444444


Q ss_pred             hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      ..+.|... ........+.   ...+|... ...|........++++.+||     .+||+.||++|||+.|+++||||.
T Consensus       257 ~~g~p~~~-~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~li-----~~~L~~dP~~R~t~~e~l~hp~f~  326 (394)
T 4e7w_A          257 VLGTPSRE-QIKTMNPNYM---EHKFPQIR-PHPFSKVFRPRTPPDAIDLI-----SRLLEYTPSARLTAIEALCHPFFD  326 (394)
T ss_dssp             HHCCCCHH-HHHHHCGGGS---SSCCCCCC-CCCHHHHSCTTCCHHHHHHH-----HHHCCSSGGGSCCHHHHHTSGGGS
T ss_pred             HhCCCCHH-HHHhhChhhh---hhcccccc-CCcHHHhccccCCHHHHHHH-----HHHhCCChhhCCCHHHHhcChhhh
Confidence            44443221 1111111111   11222211 12344434444557788888     999999999999999999999999


Q ss_pred             cCCCC
Q psy7309         236 EGSSS  240 (454)
Q Consensus       236 ~~~~~  240 (454)
                      +....
T Consensus       327 ~~~~~  331 (394)
T 4e7w_A          327 ELRTG  331 (394)
T ss_dssp             TTTSS
T ss_pred             hhccc
Confidence            76543


No 52 
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.95  E-value=1.7e-29  Score=273.86  Aligned_cols=172  Identities=26%  Similarity=0.329  Sum_probs=137.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++|||||||||+|||++.++++||+|||+|+...                         ...
T Consensus       442 ~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~-------------------------~~~  496 (674)
T 3pfq_A          442 PHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI-------------------------WDG  496 (674)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC-------------------------CTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc-------------------------cCC
Confidence            4688999999999999999999999999999999999999999999997432                         112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|++               |+
T Consensus       497 ~~~~~~~GT~~Y~APE~l~---~~~~~~~~--DvwSl--------------GvilyelltG~~---------------Pf  542 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIA---YQPYGKSV--DWWAF--------------GVLLYEMLAGQA---------------PF  542 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHT---CCCBSTHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             cccccccCCCcccCHhhhc---CCCCCccc--eEech--------------HHHHHHHHcCCC---------------CC
Confidence            3345678999999999998   67899999  99999              999999876654               45


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCCh-----hhhhcCccccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSS-----EQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta-----~e~l~hp~f~~  236 (454)
                      .+.+....+..+.. ....+|...             ++++.+||     ++||+.||++||++     +|+++||||..
T Consensus       543 ~~~~~~~~~~~i~~-~~~~~p~~~-------------s~~~~~li-----~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          543 EGEDEDELFQSIME-HNVAYPKSM-------------SKEAVAIC-----KGLMTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             CCSSHHHHHHHHHS-SCCCCCTTS-------------CHHHHHHH-----HHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             CCCCHHHHHHHHHh-CCCCCCccC-------------CHHHHHHH-----HHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence            55444445555443 334455442             37788888     99999999999998     99999999974


Q ss_pred             CCCCCCCccCccccccCCCCCCC
Q psy7309         237 GSSSGLSVLGSEQLLTCDHIPPP  259 (454)
Q Consensus       237 ~~~~~~~~~~~~~ll~~~~~~~~  259 (454)
                              ++|+.+......||.
T Consensus       604 --------i~w~~l~~~~~~pp~  618 (674)
T 3pfq_A          604 --------IDWEKLERKEIQPPY  618 (674)
T ss_dssp             --------CCHHHHTTTCSCCSC
T ss_pred             --------CCHHHHHhCCCCCCC
Confidence                    678888776666553


No 53 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.95  E-value=1.9e-29  Score=255.78  Aligned_cols=174  Identities=27%  Similarity=0.349  Sum_probs=131.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|+...                          ..
T Consensus       115 ~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~--------------------------~~  168 (384)
T 4fr4_A          115 ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--------------------------RE  168 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--------------------------TT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeecc--------------------------CC
Confidence            4688999999999999999999999999999999999999999999997542                          12


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++....+..|+.++  ||||+              ||++|||++|++               |+
T Consensus       169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~--DiwSl--------------G~il~elltG~~---------------Pf  217 (384)
T 4fr4_A          169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAV--DWWSL--------------GVTAYELLRGRR---------------PY  217 (384)
T ss_dssp             CCBCCCCSCGGGCCGGGTCCCSSCCBCTTH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             CceeccCCCccccCCeeeccCCCCCCCccc--eeech--------------HHHHHHHHhCCC---------------CC
Confidence            334567899999999999743345688888  99999              999999776553               22


Q ss_pred             CC---chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-hhhhhcCcccccC
Q psy7309         162 TG---SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-SEQNLCQPISLEG  237 (454)
Q Consensus       162 ~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-a~e~l~hp~f~~~  237 (454)
                      ..   .........+. .....+|...             ++.+.++|     ++||+.||.+||+ ++++++||||.. 
T Consensus       218 ~~~~~~~~~~~~~~~~-~~~~~~p~~~-------------s~~~~~li-----~~lL~~dP~~R~s~~~~l~~hp~f~~-  277 (384)
T 4fr4_A          218 HIRSSTSSKEIVHTFE-TTVVTYPSAW-------------SQEMVSLL-----KKLLEPNPDQRFSQLSDVQNFPYMND-  277 (384)
T ss_dssp             CCCTTSCHHHHHHHHH-HCCCCCCTTS-------------CHHHHHHH-----HHHSCSSGGGSCCSHHHHHTSGGGTT-
T ss_pred             CCCCCccHHHHHHHHh-hcccCCCCcC-------------CHHHHHHH-----HHHhcCCHhHhcccHHHHHcChhhhc-
Confidence            21   11122222222 2223334332             26677888     9999999999999 899999999974 


Q ss_pred             CCCCCCccCccccccCCCCCCC
Q psy7309         238 SSSGLSVLGSEQLLTCDHIPPP  259 (454)
Q Consensus       238 ~~~~~~~~~~~~ll~~~~~~~~  259 (454)
                             ++|+.+.+....|+.
T Consensus       278 -------~~w~~~~~~~~~p~~  292 (384)
T 4fr4_A          278 -------INWDAVFQKRLIPGF  292 (384)
T ss_dssp             -------CCHHHHHTTCSCCCC
T ss_pred             -------CCHHHHHhCCCCCCC
Confidence                   567777766655553


No 54 
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.95  E-value=9.6e-30  Score=261.71  Aligned_cols=186  Identities=26%  Similarity=0.322  Sum_probs=124.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC--eEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH--VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~--vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      ..+++++.||+.||+|||++||+||||||+|||++.++.  +||+|||+|+...                          
T Consensus       200 ~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~--------------------------  253 (429)
T 3kvw_A          200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--------------------------  253 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC--------------------------
Confidence            468899999999999999999999999999999999887  9999999986432                          


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHh
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNI  154 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i  154 (454)
                        ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|.+     ...+.+...+
T Consensus       254 --~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~elltG~~pf~~~~~~~~l~~i~  312 (429)
T 3kvw_A          254 --QRVYTYIQSRFYRAPEVIL---GARYGMPI--DMWSL--------------GCILAELLTGYPLLPGEDEGDQLACMI  312 (429)
T ss_dssp             --CCCCSSCSCGGGCCHHHHH---TBCCCTHH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             --CcccccCCCCCccChHHHh---CCCCCchH--HHHhH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence              2234568999999999998   67788888  99999              999999777654     2233333333


Q ss_pred             hhcCCCCCCchh-hhhhhhhccC-CCCCC-----------------------CccccccccccccccccccchhHHHHHH
Q psy7309         155 RRENGPSTGSNV-QKSLQKFQKS-PPSVY-----------------------REWRSSFEWSTVRNNIKSNFQHFLILIH  209 (454)
Q Consensus       155 ~~~~~p~~~~~~-~~~~~~~~~~-~~~~~-----------------------p~~~~~~~~~~~~~~~~~~~~~~li~~~  209 (454)
                      ...+.|...... ......+... ..+.+                       ......-.|........++.+.+||   
T Consensus       313 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli---  389 (429)
T 3kvw_A          313 ELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFL---  389 (429)
T ss_dssp             HHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHH---
T ss_pred             HHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHH---
Confidence            333333221100 0001111100 00000                       0000011233333334456677777   


Q ss_pred             HHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         210 QQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       210 ~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                        ++||++||++||||+|+|+||||.....
T Consensus       390 --~~~L~~dP~~Rpta~e~L~Hpw~~~~~~  417 (429)
T 3kvw_A          390 --KQCLEWDPAVRMTPGQALRHPWLRRRLP  417 (429)
T ss_dssp             --HHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred             --HHHCCCChhhCCCHHHHhCChhhccCCC
Confidence              9999999999999999999999996543


No 55 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95  E-value=3.7e-29  Score=252.03  Aligned_cols=177  Identities=27%  Similarity=0.378  Sum_probs=126.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+...                            
T Consensus       128 ~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~----------------------------  179 (367)
T 1cm8_A          128 DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD----------------------------  179 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc----------------------------
Confidence            3678999999999999999999999999999999999999999999997432                            


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      ...+..+||+.|+|||++..  ...|+.++  ||||+              ||+++||++|++     ...+.+..++..
T Consensus       180 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~ell~g~~pf~~~~~~~~l~~i~~~  241 (367)
T 1cm8_A          180 SEMTGYVVTRWYRAPEVILN--WMRYTQTV--DIWSV--------------GCIMAEMITGKTLFKGSDHLDQLKEIMKV  241 (367)
T ss_dssp             SSCCSSCSCGGGCCTHHHHT--TTCCCTTH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             cccCcCcCCCCcCCHHHHhC--CCCCChhh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            12345689999999999871  25788888  99999              999999777654     233444444444


Q ss_pred             cCCCCCCc-------hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309         157 ENGPSTGS-------NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL  229 (454)
Q Consensus       157 ~~~p~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l  229 (454)
                      .+.|....       ........+.......         |..+.. ..++.+.+||     .+||+.||++|||++|+|
T Consensus       242 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~ll-----~~mL~~dP~~R~t~~e~l  306 (367)
T 1cm8_A          242 TGTPPAEFVQRLQSDEAKNYMKGLPELEKKD---------FASILT-NASPLAVNLL-----EKMLVLDAEQRVTAGEAL  306 (367)
T ss_dssp             HCCCCHHHHHTCSCHHHHHHHHHSCCCCCCC---------GGGTCT-TCCHHHHHHH-----HHHSCSSTTTSCCHHHHH
T ss_pred             cCCCCHHHHHHhhhHHHHHHHHhCCCCCCCC---------HHHHCC-CCCHHHHHHH-----HHHccCChhHCCCHHHHh
Confidence            34432210       0111111221111111         222211 2236777888     999999999999999999


Q ss_pred             cCcccccCCC
Q psy7309         230 CQPISLEGSS  239 (454)
Q Consensus       230 ~hp~f~~~~~  239 (454)
                      +||||.....
T Consensus       307 ~hp~f~~~~~  316 (367)
T 1cm8_A          307 AHPYFESLHD  316 (367)
T ss_dssp             HSGGGTTTC-
T ss_pred             cChHHHhhcC
Confidence            9999987554


No 56 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.95  E-value=1.5e-29  Score=254.59  Aligned_cols=160  Identities=24%  Similarity=0.363  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC----CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED----HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      ..++.+++||+.||.|||++||+||||||+|||++.++    .+||+|||++.....                       
T Consensus       115 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~-----------------------  171 (361)
T 2yab_A          115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-----------------------  171 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC-----------------------
Confidence            46889999999999999999999999999999998877    799999999975421                       


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE  157 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~  157 (454)
                         .......+||+.|+|||++.   +..|+.++  ||||+              ||++|+|++|.+             
T Consensus       172 ---~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------Gvil~~ll~g~~-------------  216 (361)
T 2yab_A          172 ---GVEFKNIFGTPEFVAPEIVN---YEPLGLEA--DMWSI--------------GVITYILLSGAS-------------  216 (361)
T ss_dssp             ---TCCCCCCCSCGGGCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSCC-------------
T ss_pred             ---CCccccCCCCccEECchHHc---CCCCCccc--cHHHH--------------HHHHHHHHhCCC-------------
Confidence               22344568999999999998   66788888  99999              999999776543             


Q ss_pred             CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                        |+.+.+....+..+... ...++...    |     ...++.+.+||     ++||..||++|||++|+|+||||..
T Consensus       217 --Pf~~~~~~~~~~~i~~~-~~~~~~~~----~-----~~~s~~~~~li-----~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          217 --PFLGDTKQETLANITAV-SYDFDEEF----F-----SQTSELAKDFI-----RKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             --SSCCSSHHHHHHHHHTT-CCCCCHHH----H-----TTSCHHHHHHH-----HHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             --CCCCCCHHHHHHHHHhc-CCCCCchh----c-----cCCCHHHHHHH-----HHHCCCChhHCcCHHHHhcCcCcCC
Confidence              44444444444444422 22232211    1     12346778888     9999999999999999999999974


No 57 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.95  E-value=1.5e-30  Score=255.75  Aligned_cols=174  Identities=19%  Similarity=0.177  Sum_probs=110.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHc--------CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ--------GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPID   73 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~--------giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~   73 (454)
                      +.+.+++.|++.||+|||++        |||||||||+|||++.++++||+|||+|+.......                
T Consensus       100 ~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~----------------  163 (303)
T 3hmm_A          100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD----------------  163 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTT----------------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCC----------------
Confidence            46789999999999999987        999999999999999999999999999985532100                


Q ss_pred             CCCcccCCCCCcCcccccceecccccccc---ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHH
Q psy7309          74 STAFYSHDTSHTGQVGTALYAAPELDSHG---VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEEL  150 (454)
Q Consensus        74 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~---~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l  150 (454)
                           .........+||+.|||||++...   ....|+.++  ||||+              ||++|||+++.+..... 
T Consensus       164 -----~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~--DVwS~--------------Gvvl~El~tg~~~~~~~-  221 (303)
T 3hmm_A          164 -----TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA--DIYAM--------------GLVFWEIARRCSIGGIH-  221 (303)
T ss_dssp             -----EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHH--HHHHH--------------HHHHHHHHHTBCBTTBC-
T ss_pred             -----ceeeecccccccccccCHHHhcccccccCCccChhH--hhhhH--------------HHHHHHHHHCCCCCCcc-
Confidence                 112234457899999999998622   123577788  99999              99999987765421000 


Q ss_pred             HHHhhhcCCCCCCc-----hhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC
Q psy7309         151 KHNIRRENGPSTGS-----NVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS  224 (454)
Q Consensus       151 ~~~i~~~~~p~~~~-----~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt  224 (454)
                          .....|+...     ........+. ....+.+|.....        ........+|+     .+||+.||++|||
T Consensus       222 ----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~--------~~~~~~l~~li-----~~cl~~dP~~RPt  284 (303)
T 3hmm_A          222 ----EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQS--------CEALRVMAKIM-----RECWYANGAARLT  284 (303)
T ss_dssp             ----CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGS--------SHHHHHHHHHH-----HTTCCSSGGGSCC
T ss_pred             ----ccccccchhcccccchHHHHHHHHhcccCCCCCCccccc--------hHHHHHHHHHH-----HHHcccCHhHCcC
Confidence                0011122111     1112222221 1222333332110        00112344566     9999999999999


Q ss_pred             hhhhhc
Q psy7309         225 SEQNLC  230 (454)
Q Consensus       225 a~e~l~  230 (454)
                      +.|+++
T Consensus       285 ~~ei~~  290 (303)
T 3hmm_A          285 ALRIKK  290 (303)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998875


No 58 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.95  E-value=2e-29  Score=260.41  Aligned_cols=171  Identities=23%  Similarity=0.319  Sum_probs=129.5

Q ss_pred             hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|+...                         ..
T Consensus       248 ~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~-------------------------~~  302 (446)
T 4ejn_A          248 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI-------------------------KD  302 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC-------------------------C-
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc-------------------------CC
Confidence            4678999999999999998 999999999999999999999999999997432                         11


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|+.               |
T Consensus       303 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~---------------P  348 (446)
T 4ejn_A          303 GATMKTFCGTPEYLAPEVLE---DNDYGRAV--DWWGL--------------GVVMYEMMCGRL---------------P  348 (446)
T ss_dssp             ----CCSSSCGGGCCHHHHH---TSCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             CcccccccCCccccCHhhcC---CCCCCCcc--chhhh--------------HHHHHHHhhCCC---------------C
Confidence            22345578999999999997   67788888  99999              999999776553               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCcccc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISL  235 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~  235 (454)
                      +...........+.. ....+|...             ++.+.+||     .+||+.||++||     |++|+++||||.
T Consensus       349 f~~~~~~~~~~~i~~-~~~~~p~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~t~~ell~hp~f~  409 (446)
T 4ejn_A          349 FYNQDHEKLFELILM-EEIRFPRTL-------------GPEAKSLL-----SGLLKKDPKQRLGGGSEDAKEIMQHRFFA  409 (446)
T ss_dssp             SCCSSHHHHHHHHHH-CCCCCCTTS-------------CHHHHHHH-----HHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred             CCCCCHHHHHHHHHh-CCCCCCccC-------------CHHHHHHH-----HHHcccCHHHhCCCCCCCHHHHHhCcccc
Confidence            333333333333332 223344332             26777888     999999999999     999999999998


Q ss_pred             cCCCCCCCccCccccccCCCCCC
Q psy7309         236 EGSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       236 ~~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                      .        ++|+.+.+....|+
T Consensus       410 ~--------~~~~~~~~~~~~pp  424 (446)
T 4ejn_A          410 G--------IVWQHVYEKKLSPP  424 (446)
T ss_dssp             T--------CCHHHHHTTCSCCS
T ss_pred             C--------CCHHHHhhCcCCCC
Confidence            5        45666665544443


No 59 
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.95  E-value=3e-29  Score=257.33  Aligned_cols=183  Identities=21%  Similarity=0.316  Sum_probs=130.6

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+....                          .
T Consensus       157 ~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~--------------------------~  210 (420)
T 1j1b_A          157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--------------------------G  210 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT--------------------------T
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhccc--------------------------C
Confidence            578999999999999999999999999999999965 5689999999985421                          1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|||++|++     ...+.+..++..
T Consensus       211 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--DiwSl--------------G~il~ell~G~~pf~~~~~~~~l~~i~~~  272 (420)
T 1j1b_A          211 EPNVSYICSRYYRAPELIFG--ATDYTSSI--DVWSA--------------GCVLAELLLGQPIFPGDSGVDQLVEIIKV  272 (420)
T ss_dssp             CCCCSCCSCTTSCCHHHHTT--CSSCCTHH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             CCceeeeeCCCcCCHHHHcC--CCCCCchh--hhHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            22345689999999999871  34688888  99999              999999777654     234455555544


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      .+.|... ......   .......+|... ...|........++.+.+||     .+||+.||++|||+.|+++||||..
T Consensus       273 lg~p~~~-~~~~~~---~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~Li-----~~~L~~dP~~R~t~~e~l~hp~f~~  342 (420)
T 1j1b_A          273 LGTPTRE-QIREMN---PNYTEFKFPQIK-AHPWTKVFRPRTPPEAIALC-----SRLLEYTPTARLTPLEACAHSFFDE  342 (420)
T ss_dssp             HCSCCHH-HHHHHC---SCCCCCCCCCCC-CCCHHHHSCTTSCHHHHHHH-----HHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             hCCCCHH-HHHhhC---hhhhhhccCccC-CCCHHHhcCCCCCHHHHHHH-----HHhccCChhHCCCHHHHhCCHhhcc
Confidence            4433211 111110   011122233221 13455544445567888888     9999999999999999999999986


Q ss_pred             CCC
Q psy7309         237 GSS  239 (454)
Q Consensus       237 ~~~  239 (454)
                      ...
T Consensus       343 ~~~  345 (420)
T 1j1b_A          343 LRD  345 (420)
T ss_dssp             GGC
T ss_pred             ccc
Confidence            543


No 60 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.95  E-value=2.2e-29  Score=245.42  Aligned_cols=161  Identities=23%  Similarity=0.312  Sum_probs=117.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....                         ..
T Consensus       137 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-------------------------~~  191 (298)
T 2zv2_A          137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG-------------------------SD  191 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSS-------------------------SS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCcccccc-------------------------cc
Confidence            46889999999999999999999999999999999999999999999975421                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.......++.++  ||||+              ||++|+|++|+.               |+
T Consensus       192 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Di~sl--------------G~~l~~l~~g~~---------------pf  240 (298)
T 2zv2_A          192 ALLSNTVGTPAFMAPESLSETRKIFSGKAL--DVWAM--------------GVTLYCFVFGQC---------------PF  240 (298)
T ss_dssp             CEECCCCSCGGGCCGGGCCTTCCCEESHHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             ccccCCcCCccccChhhhccCCCCCCCchh--hhHhH--------------HHHHHHHHHCCC---------------CC
Confidence            123446899999999998732222246677  99999              999999766543               23


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      ...........+.. ....++..           ...++...++|     .+||+.||++|||++|+++||||.
T Consensus       241 ~~~~~~~~~~~~~~-~~~~~~~~-----------~~~~~~l~~li-----~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          241 MDERIMCLHSKIKS-QALEFPDQ-----------PDIAEDLKDLI-----TRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             CCSSHHHHHHHHHH-CCCCCCSS-----------SCCCHHHHHHH-----HHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             CCccHHHHHHHHhc-ccCCCCCc-----------cccCHHHHHHH-----HHHhhcChhhCCCHHHHhcCcccc
Confidence            33222222222221 11222221           11236677888     999999999999999999999996


No 61 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.95  E-value=3.5e-29  Score=258.62  Aligned_cols=162  Identities=26%  Similarity=0.400  Sum_probs=123.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc---CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY---EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~---~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.   ++.+||+|||+|.....                        
T Consensus       110 ~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~------------------------  165 (444)
T 3soa_A          110 ADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG------------------------  165 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC------------------------
Confidence            367899999999999999999999999999999984   57899999999975421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                       ........+||+.|+|||++.   +..|+.++  ||||+              ||++|+|++|.+              
T Consensus       166 -~~~~~~~~~gt~~Y~APE~l~---~~~~~~~~--DIwSl--------------Gvilyell~G~~--------------  211 (444)
T 3soa_A          166 -EQQAWFGFAGTPGYLSPEVLR---KDPYGKPV--DLWAC--------------GVILYILLVGYP--------------  211 (444)
T ss_dssp             -TCCBCCCSCSCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             -CCceeecccCCcccCCHHHhc---CCCCCCcc--ccHHH--------------HHHHHHHHhCCC--------------
Confidence             122334578999999999998   66788888  99999              999999876553              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       |+.+.........+.... ..++..    .|.     ..++.+.+||     .+||+.||++|||+.|+|+||||...
T Consensus       212 -Pf~~~~~~~~~~~i~~~~-~~~~~~----~~~-----~~s~~~~~li-----~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          212 -PFWDEDQHRLYQQIKAGA-YDFPSP----EWD-----TVTPEAKDLI-----NKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             -SCCCSSHHHHHHHHHHTC-CCCCTT----TTT-----TSCHHHHHHH-----HHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             -CCCCccHHHHHHHHHhCC-CCCCcc----ccc-----cCCHHHHHHH-----HHHcCCChhHCCCHHHHhcCccccCC
Confidence             444444444444443222 222221    121     2347778888     99999999999999999999999753


No 62 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.95  E-value=3e-29  Score=248.56  Aligned_cols=171  Identities=31%  Similarity=0.448  Sum_probs=126.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....                         ..
T Consensus       121 ~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~-------------------------~~  175 (327)
T 3a62_A          121 DTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-------------------------DG  175 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccccc-------------------------CC
Confidence            35788999999999999999999999999999999999999999999875321                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..++.++  ||||+              |+++|||++|+.               |+
T Consensus       176 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~g~~---------------pf  221 (327)
T 3a62_A          176 TVTHTFCGTIEYMAPEILM---RSGHNRAV--DWWSL--------------GALMYDMLTGAP---------------PF  221 (327)
T ss_dssp             ---CTTSSCCTTSCHHHHT---TSCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------SC
T ss_pred             ccccccCCCcCccCHhhCc---CCCCCCcc--cchhH--------------HHHHHHHHHCCC---------------CC
Confidence            2234568999999999998   56788888  99999              999999776543               34


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~  236 (454)
                      .+.+.......+... ...+|...             ++.+.++|     .+||+.||++||     +++|+++||||..
T Consensus       222 ~~~~~~~~~~~i~~~-~~~~p~~~-------------~~~~~~li-----~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          222 TGENRKKTIDKILKC-KLNLPPYL-------------TQEARDLL-----KKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             CCSSHHHHHHHHHHT-CCCCCTTS-------------CHHHHHHH-----HHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             CCCCHHHHHHHHHhC-CCCCCCCC-------------CHHHHHHH-----HHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence            443333333333322 22333332             26677888     999999999999     7889999999973


Q ss_pred             CCCCCCCccCccccccCCCCCC
Q psy7309         237 GSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       237 ~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                              ++|+++......|+
T Consensus       283 --------~~~~~~~~~~~~~p  296 (327)
T 3a62_A          283 --------INWEELLARKVEPP  296 (327)
T ss_dssp             --------CCHHHHHTTCSCCS
T ss_pred             --------CCHHHHhhccCCCC
Confidence                    56667766555444


No 63 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.95  E-value=5.8e-29  Score=245.22  Aligned_cols=190  Identities=23%  Similarity=0.272  Sum_probs=123.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....                         ..
T Consensus       108 ~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~-------------------------~~  162 (317)
T 2pmi_A          108 NLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI-------------------------PV  162 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS-------------------------CC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC-------------------------Cc
Confidence            35788999999999999999999999999999999999999999999975431                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|||++|++.     ....+...+..
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~el~~g~~pf~~~~~~~~~~~i~~~  224 (317)
T 2pmi_A          163 NTFSSEVVTLWYRAPDVLMG--SRTYSTSI--DIWSC--------------GCILAEMITGKPLFPGTNDEEQLKLIFDI  224 (317)
T ss_dssp             CCCCCCCSCCTTCCHHHHTT--CCCCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             ccCCCCcccccccCchHhhC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            23345688999999999871  24678888  99999              9999997765541     12222222222


Q ss_pred             cCCCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         157 ENGPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       157 ~~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      .+.|..... .......+........+..... .+........++.+.+||     .+||+.||++|||++|+|+||||.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li-----~~~L~~dP~~Rpt~~e~l~hp~f~  298 (317)
T 2pmi_A          225 MGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQ-VLQPHTKEPLDGNLMDFL-----HGLLQLNPDMRLSAKQALHHPWFA  298 (317)
T ss_dssp             HCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHH-HHGGGCSSCCCHHHHHHH-----HHHSCSSGGGSCCHHHHTTSGGGG
T ss_pred             hCCCChhHhhhhhhhhhcccccccccchhHHH-hhcccccccCCHHHHHHH-----HHHCCCCcccCCCHHHHhCChhhh
Confidence            222221111 0000000000000000000000 000001122346677777     999999999999999999999999


Q ss_pred             cCCCC
Q psy7309         236 EGSSS  240 (454)
Q Consensus       236 ~~~~~  240 (454)
                      +....
T Consensus       299 ~~~~~  303 (317)
T 2pmi_A          299 EYYHH  303 (317)
T ss_dssp             GGCC-
T ss_pred             cccch
Confidence            65543


No 64 
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.95  E-value=3.2e-29  Score=252.66  Aligned_cols=178  Identities=30%  Similarity=0.418  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+....                           
T Consensus       132 ~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~---------------------------  184 (367)
T 2fst_X          132 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---------------------------  184 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccc---------------------------
Confidence            36889999999999999999999999999999999999999999999985421                           


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                       ..+..+||+.|+|||++..  ...|+.++  ||||+              ||++|||++|++     ...+.+..++..
T Consensus       185 -~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~ell~g~~pf~~~~~~~~l~~i~~~  245 (367)
T 2fst_X          185 -EMTGYVATRWYRAPEIMLN--WMHYNQTV--DIWSV--------------GCIMAELLTGRTLFPGTDHIDQLKLILRL  245 (367)
T ss_dssp             -------CCCTTCCHHHHTT--CCSCCTTH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             -cCCCcCcCcCccChHHHcC--CcCCCchh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence             2345689999999999872  25788888  99999              999999777654     233444444443


Q ss_pred             cCCCCCC-------chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309         157 ENGPSTG-------SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL  229 (454)
Q Consensus       157 ~~~p~~~-------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l  229 (454)
                      .+.|...       .........+.....         ..|...... .++.+.+||     .+||+.||++|||++|+|
T Consensus       246 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~dLl-----~~mL~~dP~~R~t~~e~L  310 (367)
T 2fst_X          246 VGTPGAELLKKISSESARNYIQSLTQMPK---------MNFANVFIG-ANPLAVDLL-----EKMLVLDSDKRITAAQAL  310 (367)
T ss_dssp             HCSCCHHHHTTCCCHHHHHHHHTSCCCCC---------CCHHHHTTT-CCHHHHHHH-----HHHSCSSGGGSCCHHHHH
T ss_pred             hCCCCHHHHHHhhhHHHHHHHhccCCCCC---------CCHHHHCCC-CCHHHHHHH-----HHhCCCCcccCcCHHHHh
Confidence            3443211       011111111111111         122222212 236677888     999999999999999999


Q ss_pred             cCcccccCCCC
Q psy7309         230 CQPISLEGSSS  240 (454)
Q Consensus       230 ~hp~f~~~~~~  240 (454)
                      +||||.....+
T Consensus       311 ~hp~~~~~~~~  321 (367)
T 2fst_X          311 AHAYFAQYHDP  321 (367)
T ss_dssp             TSGGGTTTCCG
T ss_pred             cChhhhhccCC
Confidence            99999976543


No 65 
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.95  E-value=5.3e-29  Score=253.88  Aligned_cols=189  Identities=25%  Similarity=0.340  Sum_probs=119.9

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE----ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI----DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl----~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      .++.+++||+.||+|||++||+||||||+|||+    +.++.+||+|||+|+......                      
T Consensus       129 ~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~----------------------  186 (405)
T 3rgf_A          129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL----------------------  186 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCC----------------------
Confidence            588999999999999999999999999999999    677899999999998653210                      


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh------------
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT------------  146 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~------------  146 (454)
                      .........+||+.|+|||++..  ...|+.++  ||||+              ||++|||++|++..            
T Consensus       187 ~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~--DiwSl--------------G~il~ell~g~~pf~~~~~~~~~~~~  248 (405)
T 3rgf_A          187 KPLADLDPVVVTFWYRAPELLLG--ARHYTKAI--DIWAI--------------GCIFAELLTSEPIFHCRQEDIKTSNP  248 (405)
T ss_dssp             ----------CCCTTCCHHHHTT--CCSCCHHH--HHHHH--------------HHHHHHHHHSSCTTCCCC------CC
T ss_pred             cccccCCCceecCcccCchhhcC--CCcccchh--hhHHH--------------HHHHHHHHhCCCCCCCcccccccccc
Confidence            11123455789999999999871  24588888  99999              99888877665422            


Q ss_pred             --HHHHHHHhhhcCCCCCCchhh--------hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcC
Q psy7309         147 --LEELKHNIRRENGPSTGSNVQ--------KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLN  216 (454)
Q Consensus       147 --~~~l~~~i~~~~~p~~~~~~~--------~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~  216 (454)
                        .+.+..++...+.|.......        .....+..   ..++.. ....|........++.+.+||     ++||+
T Consensus       249 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~Ll-----~~~L~  319 (405)
T 3rgf_A          249 YHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRR---NTYTNC-SLIKYMEKHKVKPDSKAFHLL-----QKLLT  319 (405)
T ss_dssp             CCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCG---GGGTTC-CHHHHHHTTTCCTTSHHHHHH-----HHHSC
T ss_pred             chHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccc---cCCCcc-hhhhhHhhcCCCCCHHHHHHH-----HHHcc
Confidence              344544444444443321100        00000100   000000 000000000011235667777     99999


Q ss_pred             CCCCCCCChhhhhcCcccccCCCC
Q psy7309         217 HDPSKRPSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       217 ~dP~~Rpta~e~l~hp~f~~~~~~  240 (454)
                      .||++|||++|+|+||||.+...+
T Consensus       320 ~dP~~R~ta~e~L~hp~f~~~~~~  343 (405)
T 3rgf_A          320 MDPIKRITSEQAMQDPYFLEDPLP  343 (405)
T ss_dssp             SSGGGSCCHHHHHTSGGGTSSSCC
T ss_pred             CCcccCCCHHHHhcChhhccCCCC
Confidence            999999999999999999976554


No 66 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.95  E-value=5.5e-29  Score=248.43  Aligned_cols=191  Identities=23%  Similarity=0.299  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.+++||+.||+|||++||+||||||+|||++.++.+||+|||+|+.......                     ...
T Consensus       124 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---------------------~~~  182 (351)
T 3mi9_A          124 SEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN---------------------SQP  182 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSS---------------------SSC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccccccc---------------------ccc
Confidence            46899999999999999999999999999999999999999999999985432100                     122


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh----hHHHHHHHhhhc
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK----TLEELKHNIRRE  157 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~----~~~~l~~~i~~~  157 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|+|++|.+.    ........+...
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~ell~g~~pf~~~~~~~~~~~i~~~  244 (351)
T 3mi9_A          183 NRYTNRVVTLWYRPPELLLG--ERDYGPPI--DLWGA--------------GCIMAEMWTRSPIMQGNTEQHQLALISQL  244 (351)
T ss_dssp             CCCCSSCSCGGGCCHHHHTT--CCSCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccCCcccccCccCchhhcC--CCCCCcHh--HHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            34456789999999999861  34578888  99999              9999997765541    111111111111


Q ss_pred             CCCCCCchhh--hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         158 NGPSTGSNVQ--KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       158 ~~p~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      .+......+.  .....+.   ...............+.....++.+.+||     .+||+.||++|||++|+|+||||.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~~L~~dP~~R~t~~e~l~hp~f~  316 (351)
T 3mi9_A          245 CGSITPEVWPNVDNYELYE---KLELVKGQKRKVKDRLKAYVRDPYALDLI-----DKLLVLDPAQRIDSDDALNHDFFW  316 (351)
T ss_dssp             HCCCCTTTSTTGGGCGGGT---SSCCCSSCCCCHHHHHHHHHCCHHHHHHH-----HHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             hCCCChhhccccccchhhc---ccccccccccCHHHHhhhccCChHHHHHH-----HHHhcCChhhCCCHHHHhCCCCcC
Confidence            1111111000  0000000   00000000000000011111235566777     999999999999999999999998


Q ss_pred             cCCC
Q psy7309         236 EGSS  239 (454)
Q Consensus       236 ~~~~  239 (454)
                      ....
T Consensus       317 ~~~~  320 (351)
T 3mi9_A          317 SDPM  320 (351)
T ss_dssp             SSSC
T ss_pred             CCCC
Confidence            6443


No 67 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95  E-value=1.2e-29  Score=250.86  Aligned_cols=162  Identities=19%  Similarity=0.237  Sum_probs=123.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc--CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY--EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~--~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++.....                         
T Consensus       102 ~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~-------------------------  156 (321)
T 1tki_A          102 REIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-------------------------  156 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC-------------------------
Confidence            368899999999999999999999999999999987  78999999999975421                         


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                       .......+||+.|+|||++.   +..++.++  ||||+              ||++|+|++|.+               
T Consensus       157 -~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~~ll~g~~---------------  201 (321)
T 1tki_A          157 -GDNFRLLFTAPEYYAPEVHQ---HDVVSTAT--DMWSL--------------GTLVYVLLSGIN---------------  201 (321)
T ss_dssp             -TCEEEEEESCGGGSCHHHHT---TCEECHHH--HHHHH--------------HHHHHHHHHSSC---------------
T ss_pred             -CCccccccCChhhcCcHHhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------
Confidence             12234568999999999998   56788888  99999              999999776543               


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      |+.+......+..+.... ..++..    .|     ...++.+.++|     .+||..||.+|||+.|+|+||||....
T Consensus       202 pf~~~~~~~~~~~i~~~~-~~~~~~----~~-----~~~s~~~~~li-----~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          202 PFLAETNQQIIENIMNAE-YTFDEE----AF-----KEISIEAMDFV-----DRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             TTCCSSHHHHHHHHHHTC-CCCCHH----HH-----TTSCHHHHHHH-----HTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             CCcCCCHHHHHHHHHcCC-CCCChh----hh-----ccCCHHHHHHH-----HHHcCCChhHCcCHHHHhcChhhccCc
Confidence            344444444444433222 222211    11     12236777888     999999999999999999999998643


No 68 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.95  E-value=7.4e-29  Score=245.11  Aligned_cols=162  Identities=25%  Similarity=0.473  Sum_probs=122.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....                         ..
T Consensus       141 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~-------------------------~~  195 (321)
T 2c30_A          141 EQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-------------------------DV  195 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS-------------------------SS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeeccc-------------------------Cc
Confidence            46889999999999999999999999999999999999999999999875421                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              |+++|||++|+.               |+
T Consensus       196 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~el~~g~~---------------pf  241 (321)
T 2c30_A          196 PKRKSLVGTPYWMAPEVIS---RSLYATEV--DIWSL--------------GIMVIEMVDGEP---------------PY  241 (321)
T ss_dssp             CCBCCCCSCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             cccccccCCccccCHhhhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            2234568999999999997   66788888  99999              999999776554               22


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      ...........+.......+...           ...++...++|     .+||+.||++|||++|+++||||....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          242 FSDSPVQAMKRLRDSPPPKLKNS-----------HKVSPVLRDFL-----ERMLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             TTSCHHHHHHHHHHSSCCCCTTG-----------GGSCHHHHHHH-----HHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             CCCCHHHHHHHHhcCCCCCcCcc-----------ccCCHHHHHHH-----HHHccCChhhCcCHHHHhcChhhccCC
Confidence            22222222233322222222111           11236677888     999999999999999999999998543


No 69 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.95  E-value=3.1e-29  Score=241.38  Aligned_cols=159  Identities=26%  Similarity=0.319  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....                          .
T Consensus       112 ~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~--------------------------~  165 (275)
T 2eue_A          112 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD--------------------------G  165 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccC--------------------------c
Confidence            46889999999999999999999999999999999999999999999975421                          1


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|+|||++.   +..+ +.++  ||||+              |+++|+|++|+.               |
T Consensus       166 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p  211 (275)
T 2eue_A          166 NFLKTSCGSPNYAAPEVIS---GKLYAGPEV--DVWSC--------------GVILYVMLCRRL---------------P  211 (275)
T ss_dssp             ---------CTTCCHHHHC---C-----THH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             ccccCCCCCcCcCCceeee---CCCCCCccc--chHHH--------------HHHHHHHHhCCC---------------C
Confidence            2234457999999999987   4444 5677  99999              999999766543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +...........+... ...+|...             ++...++|     ++||+.||++|||++|+++||||+...+
T Consensus       212 f~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~~li-----~~~l~~dP~~Rps~~e~l~h~~f~~~~~  271 (275)
T 2eue_A          212 FDDESIPVLFKNISNG-VYTLPKFL-------------SPGAAGLI-----KRMLIVNPLNRISIHEIMQDDWFKVDLP  271 (275)
T ss_dssp             SCCSSHHHHHHHHHHT-CCCCCTTS-------------CHHHHHHH-----HHHSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred             CCCCCHHHHHHHHHhC-CCCCCccC-------------CHHHHHHH-----HHHhhcCHhHCCCHHHHhhCCeecccch
Confidence            3333333333333322 22333332             26677888     9999999999999999999999996543


No 70 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.95  E-value=7.2e-29  Score=245.28  Aligned_cols=185  Identities=23%  Similarity=0.311  Sum_probs=118.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++||+.||.|||++||+||||||+|||++.++.+||+|||++.....                         ..
T Consensus       100 ~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~-------------------------~~  154 (324)
T 3mtl_A          100 HNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI-------------------------PT  154 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccC-------------------------Cc
Confidence            46889999999999999999999999999999999999999999999974321                         12


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|+|++|++     ...+.+......
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~l~~g~~pf~~~~~~~~~~~i~~~  216 (324)
T 3mtl_A          155 KTYDNEVVTLWYRPPDILLG--STDYSTQI--DMWGV--------------GCIFYEMATGRPLFPGSTVEEQLHFIFRI  216 (324)
T ss_dssp             --------CGGGCCHHHHTT--CCCCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccccccCcccccChhhhcC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            23345688999999999871  35678888  99999              999999776554     122222222232


Q ss_pred             cCCCCCCchhhhhhh--hhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309         157 ENGPSTGSNVQKSLQ--KFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS  234 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f  234 (454)
                      .+.|..... .....  .+..   ..++.... ..+... ....++.+.+||     ++||+.||++|||++|+|+||||
T Consensus       217 ~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~-~~~~~~-~~~~~~~~~~li-----~~~L~~dP~~R~t~~e~l~hp~f  285 (324)
T 3mtl_A          217 LGTPTEETW-PGILSNEEFKT---YNYPKYRA-EALLSH-APRLDSDGADLL-----TKLLQFEGRNRISAEDAMKHPFF  285 (324)
T ss_dssp             HCCCCTTTS-TTGGGCHHHHH---TCCCCCCC-CCHHHH-CTTSCHHHHHHH-----HHHSCSSGGGSCCHHHHTTSGGG
T ss_pred             hCCCChHhc-hhhhcchhhcc---cccccccc-hhhhhh-cCCCCHHHHHHH-----HHHcCcCcccCCCHHHHhcChhh
Confidence            233322211 10000  0000   00111000 000000 012336667888     99999999999999999999999


Q ss_pred             ccCCCC
Q psy7309         235 LEGSSS  240 (454)
Q Consensus       235 ~~~~~~  240 (454)
                      ......
T Consensus       286 ~~~~~~  291 (324)
T 3mtl_A          286 LSLGER  291 (324)
T ss_dssp             GGGCST
T ss_pred             hhcccc
Confidence            976543


No 71 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95  E-value=3.1e-29  Score=246.50  Aligned_cols=153  Identities=29%  Similarity=0.404  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....                          .
T Consensus       157 ~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~--------------------------~  210 (311)
T 3p1a_A          157 AQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT--------------------------A  210 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeeccc--------------------------C
Confidence            46889999999999999999999999999999999999999999999875421                          1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCc-hhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDR-PKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~-~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.    +.|+.++  ||||+              ||+++||+++. ++........+.     
T Consensus       211 ~~~~~~~gt~~y~aPE~~~----~~~~~~~--Diwsl--------------G~il~el~~g~~~~~~~~~~~~~~-----  265 (311)
T 3p1a_A          211 GAGEVQEGDPRYMAPELLQ----GSYGTAA--DVFSL--------------GLTILEVACNMELPHGGEGWQQLR-----  265 (311)
T ss_dssp             ----CCCCCGGGCCGGGGG----TCCSTHH--HHHHH--------------HHHHHHHHHTCCCCSSHHHHHHHT-----
T ss_pred             CCCcccCCCccccCHhHhc----CCCCchh--hHHHH--------------HHHHHHHHhCCCCCCCccHHHHHh-----
Confidence            2234457999999999986    3688888  99999              99999976653 211111111111     


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                                    ..   ..+...         ....++.+.++|     .+||+.||++|||++|+|+||||++
T Consensus       266 --------------~~---~~~~~~---------~~~~~~~l~~li-----~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          266 --------------QG---YLPPEF---------TAGLSSELRSVL-----VMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             --------------TT---CCCHHH---------HTTSCHHHHHHH-----HHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             --------------cc---CCCccc---------ccCCCHHHHHHH-----HHHcCCChhhCcCHHHHHhCccccC
Confidence                          00   011110         012236677888     9999999999999999999999975


No 72 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.95  E-value=1.3e-28  Score=244.05  Aligned_cols=183  Identities=24%  Similarity=0.317  Sum_probs=116.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-----CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-----EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA   76 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-----~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.     ++.+||+|||+|.....                      
T Consensus       132 ~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~----------------------  189 (329)
T 3gbz_A          132 RVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI----------------------  189 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC----------------------
Confidence            468899999999999999999999999999999954     44599999999986532                      


Q ss_pred             cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHH
Q psy7309          77 FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELK  151 (454)
Q Consensus        77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~  151 (454)
                         ........+||+.|+|||++..  ...|+.++  ||||+              ||++|||+++.+     ...+.+.
T Consensus       190 ---~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~ell~g~~pf~~~~~~~~~~  248 (329)
T 3gbz_A          190 ---PIRQFTHEIITLWYRPPEILLG--SRHYSTSV--DIWSI--------------ACIWAEMLMKTPLFPGDSEIDQLF  248 (329)
T ss_dssp             -------------CCTTCCHHHHTT--CCCCCTHH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             ---cccccCCCcCCccccCHHHhcC--CCCCCcHH--HHHHH--------------HHHHHHHHHCCCCcCCCCHHHHHH
Confidence               1223445688999999999871  24578888  99999              999999766544     2223333


Q ss_pred             HHhhhcCCCCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         152 HNIRRENGPSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       152 ~~i~~~~~p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      ..+...+.|..... .......+.    ..++.... ..+........++.+.+||     .+||+.||++|||++|+|+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~li-----~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          249 KIFEVLGLPDDTTWPGVTALPDWK----QSFPKFRG-KTLKRVLGALLDDEGLDLL-----TAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHCCCCTTTSTTGGGSTTCC----TTCCCCCC-CCHHHHHGGGSCHHHHHHH-----HHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCCCchhhhhhhhhhhhhh----hhhhhhcc-ccHhhhcccccCHHHHHHH-----HHHccCChhhCCCHHHHhC
Confidence            33332222222111 000000000    01111100 0111122223446677888     9999999999999999999


Q ss_pred             CcccccC
Q psy7309         231 QPISLEG  237 (454)
Q Consensus       231 hp~f~~~  237 (454)
                      ||||...
T Consensus       319 hp~f~~~  325 (329)
T 3gbz_A          319 HPYFSHN  325 (329)
T ss_dssp             SGGGSSS
T ss_pred             CcccCCC
Confidence            9999854


No 73 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.95  E-value=2.8e-29  Score=256.73  Aligned_cols=165  Identities=24%  Similarity=0.292  Sum_probs=123.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+....                        ...
T Consensus       168 ~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~------------------------~~~  223 (410)
T 3v8s_A          168 KWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK------------------------EGM  223 (410)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT------------------------TSE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeecc------------------------CCc
Confidence            35789999999999999999999999999999999999999999999975421                        111


Q ss_pred             CCCcCcccccceeccccccccc-cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGV-KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~-~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|+|||++.... ...|+.++  ||||+              ||++|||++|++               |
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~--DiwSl--------------Gvilyell~G~~---------------P  272 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKSQGGDGYYGREC--DWWSV--------------GVFLYEMLVGDT---------------P  272 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHTTTTTCEEETHH--HHHHH--------------HHHHHHHHHSSC---------------T
T ss_pred             ccccCCcCCccccCHHHhhccCCCcCCCCcc--eEecc--------------hHHHHHHHhCCC---------------C
Confidence            1234568999999999987321 12378888  99999              999999876654               4


Q ss_pred             CCCchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC--CCChhhhhcCcccccC
Q psy7309         161 STGSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK--RPSSEQNLCQPISLEG  237 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~--Rpta~e~l~hp~f~~~  237 (454)
                      +.+.+......++... ....+|..           ...++.+.+||     ++||+.+|.+  |||++|+++||||...
T Consensus       273 f~~~~~~~~~~~i~~~~~~~~~p~~-----------~~~s~~~~~li-----~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          273 FYADSLVGTYSKIMNHKNSLTFPDD-----------NDISKEAKNLI-----CAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             TCCSSHHHHHHHHHTHHHHCCCCTT-----------CCCCHHHHHHH-----HHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             CCCCChhhHHHHHHhccccccCCCc-----------ccccHHHHHHH-----HHHccChhhhCCCCCHHHHhcCccccCC
Confidence            4444433333333321 11233332           11237788899     9999999988  9999999999999853


No 74 
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.95  E-value=4.8e-29  Score=252.36  Aligned_cols=182  Identities=19%  Similarity=0.344  Sum_probs=130.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEc-cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFID-YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+|+....                          
T Consensus       141 ~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~--------------------------  194 (383)
T 3eb0_A          141 NLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP--------------------------  194 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC--------------------------
Confidence            36889999999999999999999999999999998 578999999999985421                          


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhh
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIR  155 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~  155 (454)
                      .......+||+.|+|||++.  +...|+.++  ||||+              ||++|||++|++     ...+.+..++.
T Consensus       195 ~~~~~~~~~t~~y~aPE~~~--~~~~~~~~~--Diwsl--------------G~il~ell~g~~pf~~~~~~~~~~~i~~  256 (383)
T 3eb0_A          195 SEPSVAYICSRFYRAPELML--GATEYTPSI--DLWSI--------------GCVFGELILGKPLFSGETSIDQLVRIIQ  256 (383)
T ss_dssp             TSCCCCCCCCSSCCCHHHHT--TCSSCCTHH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCCcCcccCCCccCHHHhc--CCCCCCcch--hhhhH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            22344568899999999987  134588888  99999              999999776554     23444545444


Q ss_pred             hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      ..+.|... .....-.   ......+|... ...|....+...++.+.+||     .+||+.||.+|||+.|+|+||||.
T Consensus       257 ~~g~p~~~-~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li-----~~~L~~dP~~R~t~~e~l~hp~f~  326 (383)
T 3eb0_A          257 IMGTPTKE-QMIRMNP---HYTEVRFPTLK-AKDWRKILPEGTPSLAIDLL-----EQILRYEPDLRINPYEAMAHPFFD  326 (383)
T ss_dssp             HHCCCCHH-HHHHHCT---TC--CCCCCCC-CCCHHHHSCTTCCHHHHHHH-----HHHCCSSGGGSCCHHHHHTSGGGH
T ss_pred             HhCCCCHH-HHHHhCc---ccccccCCccC-cccHHhhCCCCCCHHHHHHH-----HHHccCChhhCCCHHHHhcCHHHH
Confidence            44443221 1111100   11122223221 13455555555667788888     999999999999999999999998


Q ss_pred             cC
Q psy7309         236 EG  237 (454)
Q Consensus       236 ~~  237 (454)
                      ..
T Consensus       327 ~~  328 (383)
T 3eb0_A          327 HL  328 (383)
T ss_dssp             HH
T ss_pred             HH
Confidence            54


No 75 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95  E-value=2.2e-28  Score=244.00  Aligned_cols=185  Identities=24%  Similarity=0.272  Sum_probs=124.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+....                         ..
T Consensus       112 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~-------------------------~~  166 (346)
T 1ua2_A          112 SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS-------------------------PN  166 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS-------------------------CC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccC-------------------------Cc
Confidence            46889999999999999999999999999999999999999999999986531                         12


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|||+++.+     ...+.+...+..
T Consensus       167 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~ell~g~~~~~~~~~~~~~~~i~~~  228 (346)
T 1ua2_A          167 RAYTHQVVTRWYRAPELLFG--ARMYGVGV--DMWAV--------------GCILAELLLRVPFLPGDSDLDQLTRIFET  228 (346)
T ss_dssp             CCCCCSCCCCTTCCHHHHTT--CSCCCHHH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             ccCCcccccccccCchHhhC--CCCCCchh--hhHhH--------------HHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            23445689999999999861  34578888  99999              999999766554     122233333332


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      .+.|..... ...    ............+...+..+. ...++.+.+||     ++||+.||++|||++|+|+||||..
T Consensus       229 ~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li-----~~~L~~dP~~Rpt~~ell~h~~f~~  297 (346)
T 1ua2_A          229 LGTPTEEQW-PDM----CSLPDYVTFKSFPGIPLHHIF-SAAGDDLLDLI-----QGLFLFNPCARITATQALKMKYFSN  297 (346)
T ss_dssp             HCCCCTTTS-SST----TSSTTCCCCCCCCCCCHHHHC-TTCCHHHHHHH-----HHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             cCCCChhhh-hhh----ccCcccccccccCCCChHHhh-ccCCHHHHHHH-----HHHhccChhhCCCHHHHhcChhhhc
Confidence            222221110 000    000000000000011111111 12236677888     9999999999999999999999987


Q ss_pred             CCCC
Q psy7309         237 GSSS  240 (454)
Q Consensus       237 ~~~~  240 (454)
                      ...+
T Consensus       298 ~~~~  301 (346)
T 1ua2_A          298 RPGP  301 (346)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            6543


No 76 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.95  E-value=6.9e-29  Score=249.70  Aligned_cols=160  Identities=27%  Similarity=0.422  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++   .+||+|||++.....                        
T Consensus       128 ~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~------------------------  183 (362)
T 2bdw_A          128 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND------------------------  183 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC------------------------
Confidence            46889999999999999999999999999999998654   599999999975421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        .......+||+.|+|||++.   +..|+.++  ||||+              ||++|+|++|.+              
T Consensus       184 --~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~~ll~g~~--------------  228 (362)
T 2bdw_A          184 --SEAWHGFAGTPGYLSPEVLK---KDPYSKPV--DIWAC--------------GVILYILLVGYP--------------  228 (362)
T ss_dssp             --CCSCCCSCSCTTTCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --CcccccCCCCccccCHHHHc---cCCCCchh--hHHHH--------------HHHHHHHHHCCC--------------
Confidence              12234568999999999998   66788888  99999              999999876554              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                       |+.+.........+... ...++..    .|.     ..++.+.+||     .+||+.||++|||+.|+|+||||..
T Consensus       229 -Pf~~~~~~~~~~~i~~~-~~~~~~~----~~~-----~~~~~~~~li-----~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          229 -PFWDEDQHRLYAQIKAG-AYDYPSP----EWD-----TVTPEAKSLI-----DSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             -SSCCSSHHHHHHHHHHT-CCCCCTT----GGG-----GSCHHHHHHH-----HHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             -CCCCCCHHHHHHHHHhC-CCCCCcc----ccc-----CCCHHHHHHH-----HHHcCCChhhCcCHHHHhcCcccCC
Confidence             33333333333333322 2222221    122     2236777888     9999999999999999999999974


No 77 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.95  E-value=4.9e-29  Score=246.89  Aligned_cols=160  Identities=26%  Similarity=0.352  Sum_probs=120.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC----CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED----HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||++.....                       
T Consensus       114 ~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~-----------------------  170 (326)
T 2y0a_A          114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-----------------------  170 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC-----------------------
Confidence            46889999999999999999999999999999999887    799999999975421                       


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE  157 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~  157 (454)
                         .......+||+.|+|||++.   +..|+.++  ||||+              ||++|+|++|.+             
T Consensus       171 ---~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~~ll~g~~-------------  215 (326)
T 2y0a_A          171 ---GNEFKNIFGTPEFVAPEIVN---YEPLGLEA--DMWSI--------------GVITYILLSGAS-------------  215 (326)
T ss_dssp             ---TSCCCCCCSCTTTCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSCC-------------
T ss_pred             ---CCccccccCCcCcCCceeec---CCCCCcHH--HHHHH--------------HHHHHHHHHCcC-------------
Confidence               12234568999999999987   67788888  99999              999999776543             


Q ss_pred             CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                        |+.+......+..+.... ..++...    |     ...++.+.+||     ++||+.||++|||++|+|+||||..
T Consensus       216 --pf~~~~~~~~~~~~~~~~-~~~~~~~----~-----~~~~~~~~~li-----~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          216 --PFLGDTKQETLANVSAVN-YEFEDEY----F-----SNTSALAKDFI-----RRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             --SSCCSSHHHHHHHHHHTC-CCCCHHH----H-----TTSCHHHHHHH-----HHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             --CCCCCCHHHHHHHHHhcC-CCcCccc----c-----ccCCHHHHHHH-----HHHccCChhhCCCHHHHhcCCCccC
Confidence              333333333333332211 1122110    1     12236677888     9999999999999999999999974


No 78 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.95  E-value=5.3e-29  Score=256.62  Aligned_cols=165  Identities=21%  Similarity=0.309  Sum_probs=123.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++|||||||||+|||++.++++||+|||+|+....                        ...
T Consensus       175 ~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~------------------------~~~  230 (437)
T 4aw2_A          175 EMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME------------------------DGT  230 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT------------------------TSC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhccc------------------------CCC
Confidence            36789999999999999999999999999999999999999999999975421                        111


Q ss_pred             CCCcCcccccceeccccccc--cccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          82 TSHTGQVGTALYAAPELDSH--GVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~--~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      ......+||+.|+|||++..  .....|+.++  ||||+              ||++|||++|++               
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~--DvwSl--------------Gvil~elltG~~---------------  279 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPEC--DWWSL--------------GVCMYEMLYGET---------------  279 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHHTSCCEECTHH--HHHHH--------------HHHHHHHHHSSC---------------
T ss_pred             cccccccCCcCeeChHHHhhcccCCCCCCCcC--eeHHH--------------HHHHHHHHhCCC---------------
Confidence            22344689999999999862  1235688888  99999              999999876654               


Q ss_pred             CCCCchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC--CCChhhhhcCccccc
Q psy7309         160 PSTGSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK--RPSSEQNLCQPISLE  236 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~--Rpta~e~l~hp~f~~  236 (454)
                      |+.+.+......++... ....+|....          ..++.+.+||     ++||..+|++  |++++|+++||||..
T Consensus       280 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~----------~~s~~~~dLi-----~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          280 PFYAESLVETYGKIMNHKERFQFPTQVT----------DVSENAKDLI-----RRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             TTCCSSHHHHHHHHHTHHHHCCCCSSCC----------CSCHHHHHHH-----HTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             CCCCCChhHHHHhhhhccccccCCcccc----------cCCHHHHHHH-----HHHhcccccccCCCCHHHHhCCCccCC
Confidence            34443333333333211 1223343321          1237788899     9999999988  999999999999985


No 79 
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.95  E-value=1e-28  Score=248.93  Aligned_cols=182  Identities=28%  Similarity=0.374  Sum_probs=113.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....                          .
T Consensus       127 ~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~--------------------------~  180 (371)
T 2xrw_A          127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--------------------------S  180 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccc--------------------------c
Confidence            36789999999999999999999999999999999999999999999985421                          1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|+|++|++     .....+...+..
T Consensus       181 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~el~~g~~pf~~~~~~~~~~~i~~~  241 (371)
T 2xrw_A          181 FMMTPYVVTRYYRAPEVIL---GMGYKENV--DIWSV--------------GCIMGEMIKGGVLFPGTDHIDQWNKVIEQ  241 (371)
T ss_dssp             ---------CTTCCHHHHT---TCCCCTTH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHHC-
T ss_pred             cccCCceecCCccCHHHhc---CCCCCchH--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            2234568999999999998   56788888  99999              999999776554     122333333332


Q ss_pred             cCCCCCCc--hhhhhhhhhccCCCCCCCccccccccccccc-----------cccccchhHHHHHHHHhhhcCCCCCCCC
Q psy7309         157 ENGPSTGS--NVQKSLQKFQKSPPSVYREWRSSFEWSTVRN-----------NIKSNFQHFLILIHQQKWCLNHDPSKRP  223 (454)
Q Consensus       157 ~~~p~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-----------~~~~~~~~~li~~~~~~~~L~~dP~~Rp  223 (454)
                      .+.|....  ........+... .+.+..    ..|+...+           ...++.+.+||     ++||+.||++||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~mL~~dP~~R~  311 (371)
T 2xrw_A          242 LGTPCPEFMKKLQPTVRTYVEN-RPKYAG----YSFEKLFPDVLFPADSEHNKLKASQARDLL-----SKMLVIDASKRI  311 (371)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHS-SCCCCC----CCHHHHSCGGGSCCSSHHHHHHHHHHHHHH-----HHHSCSSGGGSC
T ss_pred             hCCCCHHHHHHhhhHHHHHHhh-Cccccc----cchhhhcccccCcccccccccccHHHHHHH-----HHHCcCChhhCC
Confidence            22221110  000011111100 000000    11111100           11134566777     999999999999


Q ss_pred             ChhhhhcCcccccCC
Q psy7309         224 SSEQNLCQPISLEGS  238 (454)
Q Consensus       224 ta~e~l~hp~f~~~~  238 (454)
                      |++|+|+||||....
T Consensus       312 t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          312 SVDEALQHPYINVWY  326 (371)
T ss_dssp             CHHHHHHSHHHHTTC
T ss_pred             CHHHHhCCcchhhhc
Confidence            999999999998644


No 80 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.95  E-value=6.5e-29  Score=248.60  Aligned_cols=182  Identities=24%  Similarity=0.250  Sum_probs=119.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-------------------------CCCeEEecccchhhhhhhc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-------------------------EDHVKIGDFGLATNILQKH   56 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-------------------------~~~vKL~DFGla~~~~~~~   56 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.                         ++.+||+|||+|+...   
T Consensus       137 ~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~---  213 (360)
T 3llt_A          137 EDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS---  213 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT---
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecC---
Confidence            468899999999999999999999999999999975                         7789999999997432   


Q ss_pred             CCCccccccCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceee
Q psy7309          57 AGPLARELTGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLK  136 (454)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il  136 (454)
                                               ......+||+.|+|||++.   +..|+.++  ||||+              ||++
T Consensus       214 -------------------------~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il  249 (360)
T 3llt_A          214 -------------------------DYHGSIINTRQYRAPEVIL---NLGWDVSS--DMWSF--------------GCVL  249 (360)
T ss_dssp             -------------------------SCCCSCCSCGGGCCHHHHT---TCCCCTTH--HHHHH--------------HHHH
T ss_pred             -------------------------CCCcCccCcccccCcHHHc---CCCCCCcc--chHHH--------------HHHH
Confidence                                     1234568999999999998   67788888  99999              9999


Q ss_pred             eeecCCchh----hHHHHHHHhhhcCCCCCCchhhhhhh----hhccC--CCCCCCccccccc-cc------cccccccc
Q psy7309         137 AEVYKDRPK----TLEELKHNIRRENGPSTGSNVQKSLQ----KFQKS--PPSVYREWRSSFE-WS------TVRNNIKS  199 (454)
Q Consensus       137 ~el~~~~~~----~~~~l~~~i~~~~~p~~~~~~~~~~~----~~~~~--~~~~~p~~~~~~~-~~------~~~~~~~~  199 (454)
                      |+|++|++.    ...+....+.....+.+.........    .+...  ....+|....... ..      .......+
T Consensus       250 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  329 (360)
T 3llt_A          250 AELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH  329 (360)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred             HHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence            997765541    12222222333333333222111110    00000  0001111100000 00      00001112


Q ss_pred             cchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         200 NFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       200 ~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      +.+.+||     ++||+.||++|||++|+|+||||+
T Consensus       330 ~~l~~li-----~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          330 ELFCDFL-----YSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHH-----HHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHH-----HHHhcCChhhCCCHHHHhcCcccC
Confidence            4455666     999999999999999999999995


No 81 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.95  E-value=1.1e-28  Score=248.10  Aligned_cols=166  Identities=24%  Similarity=0.261  Sum_probs=112.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC--eEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH--VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~--vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.  +||+|||+|+....                         
T Consensus       116 ~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~-------------------------  170 (361)
T 3uc3_A          116 DEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-------------------------  170 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc-------------------------
Confidence            468899999999999999999999999999999987765  99999999874321                         


Q ss_pred             CCCCCcCcccccceecccccccccccccccc-CCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQF-TPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~-~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                       .......+||+.|+|||++.   +..++.+ +  ||||+              ||++|+|++|+++...          
T Consensus       171 -~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~--Diwsl--------------G~il~ell~g~~Pf~~----------  220 (361)
T 3uc3_A          171 -HSQPKSTVGTPAYIAPEVLL---RQEYDGKIA--DVWSC--------------GVTLYVMLVGAYPFED----------  220 (361)
T ss_dssp             -----------CTTSCHHHHH---CSSCCHHHH--HHHHH--------------HHHHHHHHHSSCSCC-----------
T ss_pred             -cCCCCCCcCCCCcCChhhhc---CCCCCCCee--eeehh--------------HHHHHHHHhCCCCCCC----------
Confidence             12234468999999999987   4555544 7  99999              9999997766542110          


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                       .............+. .....+|...           ..++.+.+||     ++||+.||++|||++|+++||||....
T Consensus       221 -~~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~s~~~~~li-----~~~L~~dP~~Rps~~ell~hp~f~~~~  282 (361)
T 3uc3_A          221 -PEEPRDYRKTIQRIL-SVKYSIPDDI-----------RISPECCHLI-----SRIFVADPATRISIPEIKTHSWFLKNL  282 (361)
T ss_dssp             ----CCCHHHHHHHHH-TTCCCCCTTS-----------CCCHHHHHHH-----HHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred             -CccHHHHHHHHHHHh-cCCCCCCCcC-----------CCCHHHHHHH-----HHHccCChhHCcCHHHHHhCcchhcCC
Confidence             000111222222222 2222333321           1236677888     999999999999999999999998765


Q ss_pred             CC
Q psy7309         239 SS  240 (454)
Q Consensus       239 ~~  240 (454)
                      ..
T Consensus       283 ~~  284 (361)
T 3uc3_A          283 PA  284 (361)
T ss_dssp             CC
T ss_pred             ch
Confidence            54


No 82 
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.95  E-value=5.8e-29  Score=250.58  Aligned_cols=156  Identities=19%  Similarity=0.204  Sum_probs=113.5

Q ss_pred             HHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCCC
Q psy7309           5 WRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTSH   84 (454)
Q Consensus         5 ~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (454)
                      +.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....                            ..
T Consensus       197 ~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----------------------------~~  248 (371)
T 3q60_A          197 HILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----------------------------RG  248 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTC----------------------------EE
T ss_pred             HHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCC----------------------------Cc
Confidence            45669999999999999999999999999999999999999999985421                            11


Q ss_pred             cCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCCCc
Q psy7309          85 TGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPSTGS  164 (454)
Q Consensus        85 ~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~~~  164 (454)
                      ....||+.|+|||++.. ....|+.++  ||||+              ||++|||++|+.               |+...
T Consensus       249 ~~~~~t~~y~aPE~~~~-~~~~~~~~~--DiwSl--------------G~il~elltg~~---------------Pf~~~  296 (371)
T 3q60_A          249 PASSVPVTYAPREFLNA-STATFTHAL--NAWQL--------------GLSIYRVWCLFL---------------PFGLV  296 (371)
T ss_dssp             EGGGSCGGGCCHHHHTC-SEEECCHHH--HHHHH--------------HHHHHHHHHSSC---------------STTBC
T ss_pred             cCccCCcCCcChhhccC-CCCCcCccc--cHHHH--------------HHHHHHHHhCCC---------------CCCCc
Confidence            14567799999999971 126788888  99999              999999876654               22221


Q ss_pred             hhh--hhhhhh----ccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         165 NVQ--KSLQKF----QKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       165 ~~~--~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      ...  ......    .......++..           ...++.+.+||     .+||+.||++|||+.|+|+||||..
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          297 TPGIKGSWKRPSLRVPGTDSLAFGSC-----------TPLPDFVKTLI-----GRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             CTTCTTCCCBCCTTSCCCCSCCCTTS-----------SCCCHHHHHHH-----HHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             Ccccccchhhhhhhhccccccchhhc-----------cCCCHHHHHHH-----HHHcCCChhhCCCHHHHhcCHHHHH
Confidence            100  000000    00111111111           12346777888     9999999999999999999999984


No 83 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.95  E-value=8.4e-29  Score=248.75  Aligned_cols=186  Identities=29%  Similarity=0.412  Sum_probs=124.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......                      ...
T Consensus       128 ~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------------~~~  185 (364)
T 3qyz_A          128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH----------------------DHT  185 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG----------------------CBC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC----------------------Ccc
Confidence            4688999999999999999999999999999999999999999999998543210                      112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              ||++|+|++|++.     ..+.+...+..
T Consensus       186 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~ell~g~~pf~~~~~~~~~~~i~~~  247 (364)
T 3qyz_A          186 GFLTEYVATRWYRAPEIMLN--SKGYTKSI--DIWSV--------------GCILAEMLSNRPIFPGKHYLDQLNHILGI  247 (364)
T ss_dssp             CTTCCCCSCGGGCCHHHHHT--BCSCSTHH--HHHHH--------------HHHHHHHHHSSCSSCCSSGGGHHHHHHHH
T ss_pred             ccccccccccCCCCCHHhcC--CCCCCcch--hHHHH--------------HHHHHHHHHCCCCCCCCChHHHHHHHHHH
Confidence            23455689999999998762  34578888  99999              9999997665541     11222222222


Q ss_pred             cCCCCCCchhhh----hhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309         157 ENGPSTGSNVQK----SLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP  232 (454)
Q Consensus       157 ~~~p~~~~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp  232 (454)
                      .+.|... ....    ....+...    ++.. ....|...... .++.+.+||     .+||+.||++|||++|+|+||
T Consensus       248 ~~~~~~~-~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~-~~~~~~~li-----~~~L~~dP~~R~t~~e~l~hp  315 (364)
T 3qyz_A          248 LGSPSQE-DLNCIINLKARNYLLS----LPHK-NKVPWNRLFPN-ADSKALDLL-----DKMLTFNPHKRIEVEQALAHP  315 (364)
T ss_dssp             HCSCCHH-HHHTCCCHHHHHHHHT----SCCC-CCCCHHHHCTT-SCHHHHHHH-----HHHTCSSTTTSCCHHHHHTSG
T ss_pred             hCCCCHH-HHHHhhhhhHHHHHHh----cCCc-cCCCHHHhCCC-CCHHHHHHH-----HHHcCCChhhCCCHHHHhcCc
Confidence            2222111 0000    00000000    0100 01223333222 236677888     999999999999999999999


Q ss_pred             ccccCCC
Q psy7309         233 ISLEGSS  239 (454)
Q Consensus       233 ~f~~~~~  239 (454)
                      ||.....
T Consensus       316 ~~~~~~~  322 (364)
T 3qyz_A          316 YLEQYYD  322 (364)
T ss_dssp             GGTTTCC
T ss_pred             chhhccC
Confidence            9997654


No 84 
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.95  E-value=2e-28  Score=254.92  Aligned_cols=159  Identities=25%  Similarity=0.337  Sum_probs=123.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.+++||+.||+|||++||+||||||+|||++.++.+||+|||++....                          ..
T Consensus       116 ~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~--------------------------~~  169 (476)
T 2y94_A          116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--------------------------DG  169 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--------------------------TT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcc--------------------------cc
Confidence            4688999999999999999999999999999999999999999999997542                          12


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|+|||++.   +..| +.++  ||||+              ||++|+|++|+.               |
T Consensus       170 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~~--DiwSl--------------Gvil~elltG~~---------------P  215 (476)
T 2y94_A          170 EFLRTSCGSPNYAAPEVIS---GRLYAGPEV--DIWSS--------------GVILYALLCGTL---------------P  215 (476)
T ss_dssp             CCBCCCCSCSTTCCHHHHT---TCCBCSHHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             ccccccCCCcCeEChhhcc---CCCCCCCcc--eehhh--------------HHHHHHHhhCCC---------------C
Confidence            2344568999999999988   4444 5677  99999              999999766543               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +.+........++... ....|..             .++.+.+||     ++||+.||++|||++|+++||||.....
T Consensus       216 f~~~~~~~~~~~i~~~-~~~~p~~-------------~s~~~~~Li-----~~~L~~dP~~Rpt~~eil~hp~~~~~~~  275 (476)
T 2y94_A          216 FDDDHVPTLFKKICDG-IFYTPQY-------------LNPSVISLL-----KHMLQVDPMKRATIKDIREHEWFKQDLP  275 (476)
T ss_dssp             SCCSSSHHHHHHHHTT-CCCCCTT-------------CCHHHHHHH-----HHHTCSSTTTSCCHHHHHTCHHHHTTCC
T ss_pred             CCCCCHHHHHHHHhcC-CcCCCcc-------------CCHHHHHHH-----HHHcCCCchhCcCHHHHHhCHHhhhcCc
Confidence            4444444444444422 2233332             236677888     9999999999999999999999987543


No 85 
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.95  E-value=1e-28  Score=246.15  Aligned_cols=165  Identities=22%  Similarity=0.325  Sum_probs=113.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++ ++.+||+|||+|+.....                       ...
T Consensus       108 ~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~-----------------------~~~  163 (343)
T 3dbq_A          108 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD-----------------------TTS  163 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcc-----------------------ccc
Confidence            36789999999999999999999999999999997 688999999999754321                       111


Q ss_pred             CCCcCcccccceecccccccc--------ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHH
Q psy7309          82 TSHTGQVGTALYAAPELDSHG--------VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHN  153 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~--------~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~  153 (454)
                      ......+||+.|+|||++...        ....|+.++  ||||+              ||++|||++|+.+        
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~--Diwsl--------------G~il~ell~g~~p--------  219 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS--DVWSL--------------GCILYYMTYGKTP--------  219 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHH--HHHHH--------------HHHHHHHHHSSCT--------
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchh--hHHHH--------------HHHHHHHHhCCCc--------
Confidence            223456899999999998520        125678888  99999              9999997766542        


Q ss_pred             hhhcCCCCCCc--hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         154 IRRENGPSTGS--NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       154 i~~~~~p~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                             +...  ........+.......+|..             .+..+.++|     .+||+.||.+|||+.|+|+|
T Consensus       220 -------f~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          220 -------FQQIINQISKLHAIIDPNHEIEFPDI-------------PEKDLQDVL-----KCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             -------TTTCCSHHHHHHHHHCTTSCCCCCCC-------------SCHHHHHHH-----HHHTCSSTTTSCCHHHHHTS
T ss_pred             -------chhhhhHHHHHHHHhcCCcccCCccc-------------CCHHHHHHH-----HHHcCCChhHCCCHHHHHhC
Confidence                   2111  11111111111222223322             125567788     99999999999999999999


Q ss_pred             cccccCCC
Q psy7309         232 PISLEGSS  239 (454)
Q Consensus       232 p~f~~~~~  239 (454)
                      |||.....
T Consensus       275 p~~~~~~~  282 (343)
T 3dbq_A          275 PYVQIQTH  282 (343)
T ss_dssp             HHHHSCCC
T ss_pred             ccccccCC
Confidence            99986543


No 86 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.95  E-value=9.6e-29  Score=251.96  Aligned_cols=162  Identities=24%  Similarity=0.349  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc---CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY---EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~---~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      .+++.+++||+.||.|||++||+||||||+|||++.   ++.+||+|||+|+...                         
T Consensus       161 ~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~-------------------------  215 (400)
T 1nxk_A          161 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------------------------  215 (400)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC-------------------------
Confidence            468899999999999999999999999999999998   7889999999997432                         


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                       ........+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|++              
T Consensus       216 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~--------------  261 (400)
T 1nxk_A          216 -SHNSLTTPCYTPYYVAPEVLG---PEKYDKSC--DMWSL--------------GVIMYILLCGYP--------------  261 (400)
T ss_dssp             ------------CTTCCGGGSC---CCCSSSHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             -CCCccccCCCCCCccCHhhcC---CCCCCCcc--cHHHH--------------HHHHHHHHhCCC--------------
Confidence             122344578999999999997   67889888  99999              999999776554              


Q ss_pred             CCCCCchhh----hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309         159 GPSTGSNVQ----KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS  234 (454)
Q Consensus       159 ~p~~~~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f  234 (454)
                       |+.+....    .....+. .....++..    .|.     ..++.+.+||     ++||+.||++|||++|+++||||
T Consensus       262 -pf~~~~~~~~~~~~~~~i~-~~~~~~~~~----~~~-----~~s~~~~~li-----~~~L~~dP~~Rpt~~eil~hp~~  325 (400)
T 1nxk_A          262 -PFYSNHGLAISPGMKTRIR-MGQYEFPNP----EWS-----EVSEEVKMLI-----RNLLKTEPTQRMTITEFMNHPWI  325 (400)
T ss_dssp             -SCCCCTTCSSCCSHHHHHH-HTCCCCCTT----TTT-----TSCHHHHHHH-----HTTSCSSGGGSCCHHHHHHSHHH
T ss_pred             -CCCCCccccccHHHHHHHH-cCcccCCCc----ccc-----cCCHHHHHHH-----HHHCCCChhHCcCHHHHhcCccc
Confidence             22211100    0111111 111222211    121     1236677888     99999999999999999999999


Q ss_pred             ccCC
Q psy7309         235 LEGS  238 (454)
Q Consensus       235 ~~~~  238 (454)
                      ....
T Consensus       326 ~~~~  329 (400)
T 1nxk_A          326 MQST  329 (400)
T ss_dssp             HTTT
T ss_pred             cCCC
Confidence            8643


No 87 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.95  E-value=5.5e-29  Score=245.18  Aligned_cols=167  Identities=29%  Similarity=0.458  Sum_probs=116.8

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      .+++++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..........       ...      ......
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~-------~~~------~~~~~~  231 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT-------VLT------PMPAYA  231 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcc-------ccc------cccccc
Confidence            4789999999999999999999999999999999999999999999986532110000       000      001123


Q ss_pred             CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCCC
Q psy7309          83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPST  162 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~~  162 (454)
                      .....+||+.|+|||++.   +..|+.++  ||||+              ||++|||+++...........         
T Consensus       232 ~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~~~~~~~~~~~~---------  283 (332)
T 3qd2_B          232 THTGQVGTKLYMSPEQIH---GNNYSHKV--DIFSL--------------GLILFELLYSFSTQMERVRII---------  283 (332)
T ss_dssp             CCCSCC-CGGGSCHHHHH---CCCCCTHH--HHHHH--------------HHHHHHHHSCCCCHHHHHHHH---------
T ss_pred             cccccCCCcCccChHHhc---CCCCcchh--hHHHH--------------HHHHHHHHHcCCChhHHHHHH---------
Confidence            445678999999999998   66788888  99999              999999776554332221111         


Q ss_pred             CchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         163 GSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                              ....   ...+|...          ...++...++|     .+||+.||++|||++|+++||||..
T Consensus       284 --------~~~~---~~~~~~~~----------~~~~~~~~~li-----~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          284 --------TDVR---NLKFPLLF----------TQKYPQEHMMV-----QDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             --------HHHH---TTCCCHHH----------HHHCHHHHHHH-----HHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             --------HHhh---ccCCCccc----------ccCChhHHHHH-----HHHccCCCCcCCCHHHHhhchhhhc
Confidence                    0111   11122111          01125556788     9999999999999999999999974


No 88 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.95  E-value=1.9e-28  Score=248.74  Aligned_cols=162  Identities=28%  Similarity=0.385  Sum_probs=121.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc--CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY--EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~--~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.  .+.+||+|||+|+....                         
T Consensus       149 ~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~-------------------------  203 (387)
T 1kob_A          149 AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP-------------------------  203 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC-------------------------
Confidence            468899999999999999999999999999999974  46799999999975421                         


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                       .......+||+.|+|||++.   +..++.++  ||||+              ||++|||++|.+               
T Consensus       204 -~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~elltg~~---------------  248 (387)
T 1kob_A          204 -DEIVKVTTATAEFAAPEIVD---REPVGFYT--DMWAI--------------GVLGYVLLSGLS---------------  248 (387)
T ss_dssp             -TSCEEEECSSGGGCCHHHHT---TCCBCHHH--HHHHH--------------HHHHHHHHHSCC---------------
T ss_pred             -CcceeeeccCCCccCchhcc---CCCCCCcc--cEeeH--------------hHHHHHHHhCCC---------------
Confidence             12233457999999999998   66788888  99999              999999776543               


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      |+.+......+..+..... .++...    |     ...++.+.+||     .+||+.||++|||++|+|+||||....
T Consensus       249 Pf~~~~~~~~~~~i~~~~~-~~~~~~----~-----~~~s~~~~~li-----~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          249 PFAGEDDLETLQNVKRCDW-EFDEDA----F-----SSVSPEAKDFI-----KNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             SSCCSSHHHHHHHHHHCCC-CCCSST----T-----TTSCHHHHHHH-----HTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             CCCCCCHHHHHHHHHhCCC-CCCccc----c-----ccCCHHHHHHH-----HHHcCCChhHCcCHHHHhhCccccCCc
Confidence            3333333333333332211 111110    1     12236778888     999999999999999999999998654


No 89 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.94  E-value=1e-28  Score=247.27  Aligned_cols=159  Identities=26%  Similarity=0.411  Sum_probs=117.8

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC---eEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH---VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~---vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      .++.+++||+.||+|||++||+||||||+|||++.++.   +||+|||++.....                         
T Consensus       131 ~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~-------------------------  185 (351)
T 3c0i_A          131 VASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE-------------------------  185 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecC-------------------------
Confidence            57889999999999999999999999999999987655   99999999975431                         


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      ........+||+.|+|||++.   +..|+.++  ||||+              ||++|+|++|.+               
T Consensus       186 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~~ll~g~~---------------  231 (351)
T 3c0i_A          186 SGLVAGGRVGTPHFMAPEVVK---REPYGKPV--DVWGC--------------GVILFILLSGCL---------------  231 (351)
T ss_dssp             TSCBCCCCCSCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------
T ss_pred             CCeeecCCcCCcCccCHHHHc---CCCCCchH--hhHHH--------------HHHHHHHHHCCC---------------
Confidence            112234568999999999998   66788888  99999              999999776553               


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      |+.+.. ......+..... .++..    .|.     ..++.+.+||     ++||+.||++|||+.|+|+||||..
T Consensus       232 pf~~~~-~~~~~~i~~~~~-~~~~~----~~~-----~~s~~~~~li-----~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          232 PFYGTK-ERLFEGIIKGKY-KMNPR----QWS-----HISESAKDLV-----RRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             SSCSSH-HHHHHHHHHTCC-CCCHH----HHT-----TSCHHHHHHH-----HHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             CCCCcH-HHHHHHHHcCCC-CCCcc----ccc-----cCCHHHHHHH-----HHHCCCChhHCcCHHHHhcChhhcC
Confidence            222211 111222221211 11111    111     1236677888     9999999999999999999999985


No 90 
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.94  E-value=1.8e-28  Score=245.41  Aligned_cols=159  Identities=26%  Similarity=0.378  Sum_probs=119.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++....                            
T Consensus       154 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~----------------------------  205 (348)
T 1u5q_A          154 VEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA----------------------------  205 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC----------------------------
Confidence            3678999999999999999999999999999999999999999999987432                            


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                       .....+||+.|+|||++.......|+.++  ||||+              ||++|||++|++               |+
T Consensus       206 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Diwsl--------------G~il~ell~g~~---------------p~  253 (348)
T 1u5q_A          206 -PANSFVGTPYWMAPEVILAMDEGQYDGKV--DVWSL--------------GITCIELAERKP---------------PL  253 (348)
T ss_dssp             -SBCCCCSCGGGCCHHHHHTTSSCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             -CCCcccCCcceeCHhhhccccCCCCCcHH--HHHHH--------------HHHHHHHHhCCC---------------CC
Confidence             12345799999999998532246788888  99999              999999876654               22


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                      ...+....+..+.....+.....            ..++...++|     .+||+.||++|||++|+++||||...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~li-----~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          254 FNMNAMSALYHIAQNESPALQSG------------HWSEYFRNFV-----DSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             TTSCHHHHHHHHHHSCCCCCCCT------------TSCHHHHHHH-----HHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             CCCChHHHHHHHHhcCCCCCCCC------------CCCHHHHHHH-----HHHcccChhhCcCHHHHhhChhhhcc
Confidence            22222222222222222221111            1125667888     99999999999999999999999753


No 91 
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.94  E-value=1.6e-28  Score=249.56  Aligned_cols=163  Identities=22%  Similarity=0.324  Sum_probs=114.5

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      +++.+++||+.||+|||++||+||||||+|||++ ++.+||+|||+|+.....                       ....
T Consensus       156 ~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~-----------------------~~~~  211 (390)
T 2zmd_A          156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD-----------------------TTSV  211 (390)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCC-----------------------Cccc
Confidence            6789999999999999999999999999999995 688999999999854321                       1111


Q ss_pred             CCcCcccccceecccccccc--------ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHh
Q psy7309          83 SHTGQVGTALYAAPELDSHG--------VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNI  154 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~--------~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i  154 (454)
                      .....+||+.|+|||++...        ....|+.++  ||||+              ||++|||++|.++         
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~--DiwSl--------------Gvil~ell~G~~P---------  266 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS--DVWSL--------------GCILYYMTYGKTP---------  266 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHH--HHHHH--------------HHHHHHHHHSSCT---------
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChh--hHHHH--------------HHHHHHHHHCCCc---------
Confidence            23456899999999998621        123678888  99999              9999997766542         


Q ss_pred             hhcCCCCCCch-hhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309         155 RRENGPSTGSN-VQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP  232 (454)
Q Consensus       155 ~~~~~p~~~~~-~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp  232 (454)
                            +.... ....+..+. ......+|..             .+..+.+||     ++||+.||++|||+.|+|+||
T Consensus       267 ------f~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~L~~dP~~Rps~~ell~hp  322 (390)
T 2zmd_A          267 ------FQQIINQISKLHAIIDPNHEIEFPDI-------------PEKDLQDVL-----KCCLKRDPKQRISIPELLAHP  322 (390)
T ss_dssp             ------TTTCCCHHHHHHHHHCTTSCCCCCCC-------------SCHHHHHHH-----HHHTCSSTTTSCCHHHHHTSH
T ss_pred             ------chhhhHHHHHHHHHhCccccCCCCcc-------------chHHHHHHH-----HHHcccChhhCCCHHHHhhCc
Confidence                  22111 111111111 1122222322             125667888     999999999999999999999


Q ss_pred             ccccCC
Q psy7309         233 ISLEGS  238 (454)
Q Consensus       233 ~f~~~~  238 (454)
                      ||....
T Consensus       323 ~~~~~~  328 (390)
T 2zmd_A          323 YVQIQT  328 (390)
T ss_dssp             HHHSCC
T ss_pred             CccccC
Confidence            998644


No 92 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.94  E-value=1.7e-28  Score=242.82  Aligned_cols=164  Identities=23%  Similarity=0.350  Sum_probs=118.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       105 ~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-----------------------~~~  161 (323)
T 3tki_A          105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN-----------------------NRE  161 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET-----------------------TEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccC-----------------------Ccc
Confidence            468999999999999999999999999999999999999999999999754211                       112


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|+|||++.   +..+ +.++  ||||+              ||++|+|++|+.               |
T Consensus       162 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~~--Diwsl--------------G~il~~ll~g~~---------------p  207 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLK---RREFHAEPV--DVWSC--------------GIVLTAMLAGEL---------------P  207 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHH---CSSBCHHHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             cccCCCccCcCccCcHHhc---cCCCCCCcc--cHHHH--------------HHHHHHHHhCCC---------------C
Confidence            2334578999999999987   3444 6677  99999              999999776553               2


Q ss_pred             CCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +...... .....+... ....+.      |     ...++...+||     .+||+.||++|||++|+++||||.....
T Consensus       208 f~~~~~~~~~~~~~~~~-~~~~~~------~-----~~~~~~~~~li-----~~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          208 WDQPSDSCQEYSDWKEK-KTYLNP------W-----KKIDSAPLALL-----HKILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             CSSSCTTSHHHHHHHTT-CTTSTT------G-----GGSCHHHHHHH-----HHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             CCCCchHHHHHHHHhcc-cccCCc------c-----ccCCHHHHHHH-----HHHccCChhhCcCHHHHhhChhhccccc
Confidence            2211110 111111111 111111      1     11236667788     9999999999999999999999986544


No 93 
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.94  E-value=5.7e-28  Score=243.52  Aligned_cols=177  Identities=29%  Similarity=0.388  Sum_probs=120.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....                           
T Consensus       144 ~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~---------------------------  196 (371)
T 4exu_A          144 EKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA---------------------------  196 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccccc---------------------------
Confidence            46889999999999999999999999999999999999999999999975421                           


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                       .....+||+.|+|||++..  ...++.++  ||||+              ||++|+|++|+.     ...+.+...+..
T Consensus       197 -~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~el~~g~~pf~~~~~~~~~~~i~~~  257 (371)
T 4exu_A          197 -EMTGYVVTRWYRAPEVILS--WMHYNQTV--DIWSV--------------GCIMAEMLTGKTLFKGKDYLDQLTQILKV  257 (371)
T ss_dssp             ----CTTCCCTTSCHHHHSC--CSCCCTTH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             -CcCCcccCccccCHHHhcC--CCCCCcHH--hHHHH--------------HHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence             2344678999999999871  25788888  99999              999999776554     222333333332


Q ss_pred             cCCCCCC-------chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309         157 ENGPSTG-------SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL  229 (454)
Q Consensus       157 ~~~p~~~-------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l  229 (454)
                      .+.|...       .........+.......         |.... ...++.+.+||     ++||+.||++|||++|+|
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~li-----~~~L~~dP~~Rpt~~ell  322 (371)
T 4exu_A          258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKD---------FTQLF-PRASPQAADLL-----EKMLELDVDKRLTAAQAL  322 (371)
T ss_dssp             HCCCCHHHHTTCSCHHHHHHHHHSCCCCCCC---------HHHHS-TTSCHHHHHHH-----HHHSCSCTTTSCCHHHHH
T ss_pred             hCCCcHHHHHHhhhhhhhhhhhccCCCcchh---------HHHhc-cccChHHHHHH-----HHHCCCChhhcCCHHHHh
Confidence            2222111       00011111111111111         11111 12246777888     999999999999999999


Q ss_pred             cCcccccCCC
Q psy7309         230 CQPISLEGSS  239 (454)
Q Consensus       230 ~hp~f~~~~~  239 (454)
                      +||||.....
T Consensus       323 ~hp~f~~~~~  332 (371)
T 4exu_A          323 THPFFEPFRD  332 (371)
T ss_dssp             TSGGGTTTCC
T ss_pred             cCcccccCCC
Confidence            9999986544


No 94 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.94  E-value=1.2e-28  Score=252.14  Aligned_cols=164  Identities=21%  Similarity=0.291  Sum_probs=120.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      +.++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+....                        ...
T Consensus       162 ~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~------------------------~~~  217 (412)
T 2vd5_A          162 EMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA------------------------DGT  217 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT------------------------TSC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccC------------------------CCc
Confidence            35788999999999999999999999999999999999999999999975421                        111


Q ss_pred             CCCcCcccccceecccccccc----ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309          82 TSHTGQVGTALYAAPELDSHG----VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE  157 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~----~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~  157 (454)
                      ......+||+.|+|||++...    ....|+.++  ||||+              ||++|||++|++             
T Consensus       218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~--DiwSl--------------GvilyelltG~~-------------  268 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPEC--DWWAL--------------GVFAYEMFYGQT-------------  268 (412)
T ss_dssp             EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHH--HHHHH--------------HHHHHHHHHSSC-------------
T ss_pred             cccceeccccCcCCHHHHhhcccCcCCCCCChHH--hhhHH--------------hHHHHHHHhCCC-------------
Confidence            123346899999999998621    124688888  99999              999999876654             


Q ss_pred             CCCCCCchhhhhhhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCC---CChhhhhcCcc
Q psy7309         158 NGPSTGSNVQKSLQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKR---PSSEQNLCQPI  233 (454)
Q Consensus       158 ~~p~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~R---pta~e~l~hp~  233 (454)
                        |+.+.+......++... ....+|...          ...++.+.+||     ++||. +|.+|   ||++|+++|||
T Consensus       269 --Pf~~~~~~~~~~~i~~~~~~~~~p~~~----------~~~s~~~~dli-----~~lL~-~p~~Rlgr~~~~ei~~Hpf  330 (412)
T 2vd5_A          269 --PFYADSTAETYGKIVHYKEHLSLPLVD----------EGVPEEARDFI-----QRLLC-PPETRLGRGGAGDFRTHPF  330 (412)
T ss_dssp             --TTCCSSHHHHHHHHHTHHHHCCCC--------------CCCHHHHHHH-----HTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred             --CCCCCCHHHHHHHHHhcccCcCCCccc----------cCCCHHHHHHH-----HHHcC-ChhhcCCCCCHHHHhcCCC
Confidence              34443333333333211 111222211          11237788999     99999 99998   59999999999


Q ss_pred             ccc
Q psy7309         234 SLE  236 (454)
Q Consensus       234 f~~  236 (454)
                      |..
T Consensus       331 f~~  333 (412)
T 2vd5_A          331 FFG  333 (412)
T ss_dssp             GTT
T ss_pred             cCC
Confidence            974


No 95 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.94  E-value=1.9e-28  Score=258.46  Aligned_cols=171  Identities=29%  Similarity=0.404  Sum_probs=127.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|+....                         ..
T Consensus       289 ~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~-------------------------~~  343 (543)
T 3c4z_A          289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA-------------------------GQ  343 (543)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT-------------------------TC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccC-------------------------CC
Confidence            35788999999999999999999999999999999999999999999985421                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|++               |+
T Consensus       344 ~~~~~~~GT~~Y~APE~l~---~~~~~~~~--DiwSl--------------GvilyelltG~~---------------PF  389 (543)
T 3c4z_A          344 TKTKGYAGTPGFMAPELLL---GEEYDFSV--DYFAL--------------GVTLYEMIAARG---------------PF  389 (543)
T ss_dssp             CCBCCCCSCTTTSCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             cccccccCCccccChhhhc---CCCCChHH--hcCcc--------------hHHHHHHHhCCC---------------CC
Confidence            2234468999999999998   67889888  99999              999999876654               22


Q ss_pred             CCc----hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-----hhhhhcCc
Q psy7309         162 TGS----NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-----SEQNLCQP  232 (454)
Q Consensus       162 ~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-----a~e~l~hp  232 (454)
                      ...    ........+. .....+|...             ++.+.++|     ++||+.||++||+     ++|+++||
T Consensus       390 ~~~~~~~~~~~~~~~i~-~~~~~~p~~~-------------s~~~~~li-----~~lL~~dP~~R~~~~~~~a~ei~~Hp  450 (543)
T 3c4z_A          390 RARGEKVENKELKQRVL-EQAVTYPDKF-------------SPASKDFC-----EALLQKDPEKRLGFRDGSCDGLRTHP  450 (543)
T ss_dssp             CCTTCCCCHHHHHHHHH-HCCCCCCTTS-------------CHHHHHHH-----HHHSCSSGGGSCCCBTTBSHHHHTSG
T ss_pred             CCCccchhHHHHHHHHh-hcccCCCccc-------------CHHHHHHH-----HHhccCCHhHCCCCcccCHHHHHcCc
Confidence            221    1122222222 2233344332             36778888     9999999999996     58999999


Q ss_pred             ccccCCCCCCCccCccccccCCCCCC
Q psy7309         233 ISLEGSSSGLSVLGSEQLLTCDHIPP  258 (454)
Q Consensus       233 ~f~~~~~~~~~~~~~~~ll~~~~~~~  258 (454)
                      ||..        ++|+.+......||
T Consensus       451 ff~~--------i~w~~l~~~~~~pp  468 (543)
T 3c4z_A          451 LFRD--------ISWRQLEAGMLTPP  468 (543)
T ss_dssp             GGTT--------CCHHHHHTTCSCCS
T ss_pred             cccC--------CCHHHHHcCCCCCC
Confidence            9984        45666654444333


No 96 
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.94  E-value=1.6e-28  Score=260.10  Aligned_cols=169  Identities=29%  Similarity=0.397  Sum_probs=127.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+....                          .
T Consensus       286 ~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~--------------------------~  339 (576)
T 2acx_A          286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--------------------------G  339 (576)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT--------------------------T
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc--------------------------C
Confidence            36789999999999999999999999999999999999999999999975421                          1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|.+               |+
T Consensus       340 ~~~~~~~GT~~Y~APEvl~---~~~~~~~~--DiwSL--------------GvilyeLltG~~---------------PF  385 (576)
T 2acx_A          340 QTIKGRVGTVGYMAPEVVK---NERYTFSP--DWWAL--------------GCLLYEMIAGQS---------------PF  385 (576)
T ss_dssp             CCEECCCSCGGGCCHHHHT---TCEESSHH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             ccccccCCCccccCHHHHc---CCCCCccc--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            2334568999999999998   66789888  99999              999999776654               22


Q ss_pred             CCch----hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCc
Q psy7309         162 TGSN----VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQP  232 (454)
Q Consensus       162 ~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp  232 (454)
                      ....    .......+. .....++..             .++.+.+||     ++||+.||.+||     |++|+++||
T Consensus       386 ~~~~~~~~~~~i~~~i~-~~~~~~p~~-------------~s~~~~dLI-----~~lL~~dP~~R~g~~~~sa~eil~Hp  446 (576)
T 2acx_A          386 QQRKKKIKREEVERLVK-EVPEEYSER-------------FSPQARSLC-----SQLLCKDPAERLGCRGGSAREVKEHP  446 (576)
T ss_dssp             SCSSSCCCHHHHHHHHH-HCCCCCCTT-------------SCHHHHHHH-----HHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred             cccccchhHHHHHHHhh-cccccCCcc-------------CCHHHHHHH-----HHhccCCHHHcCCCCCCCHHHHHhCh
Confidence            2211    111122222 222333333             237788898     999999999999     789999999


Q ss_pred             ccccCCCCCCCccCccccccCCCCC
Q psy7309         233 ISLEGSSSGLSVLGSEQLLTCDHIP  257 (454)
Q Consensus       233 ~f~~~~~~~~~~~~~~~ll~~~~~~  257 (454)
                      ||..        ++|+.+......|
T Consensus       447 fF~~--------i~w~~l~~~~~~p  463 (576)
T 2acx_A          447 LFKK--------LNFKRLGAGMLEP  463 (576)
T ss_dssp             GGTT--------CCHHHHHTTCSCC
T ss_pred             hhcc--------CCHHHHhcCCCCC
Confidence            9984        4666665544333


No 97 
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.94  E-value=2.3e-28  Score=244.05  Aligned_cols=161  Identities=25%  Similarity=0.347  Sum_probs=119.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-C---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-D---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      .+++.+++||+.||+|||++||+||||||+|||+... +   .+||+|||+++....                       
T Consensus       116 ~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~-----------------------  172 (342)
T 2qr7_A          116 REASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-----------------------  172 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC-----------------------
Confidence            3688999999999999999999999999999998543 2   499999999985421                       


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE  157 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~  157 (454)
                        ........+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|.+             
T Consensus       173 --~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~-------------  218 (342)
T 2qr7_A          173 --ENGLLMTPCYTANFVAPEVLE---RQGYDAAC--DIWSL--------------GVLLYTMLTGYT-------------  218 (342)
T ss_dssp             --TTCCBCCSSCCSSCCCHHHHH---HHHHHHHH--HHHHH--------------HHHHHHHHHSSC-------------
T ss_pred             --CCCceeccCCCccccCHHHhc---CCCCCCcc--CeeeH--------------hHHHHHHhcCCC-------------
Confidence              122334568999999999997   66788888  99999              999999776543             


Q ss_pred             CCCCCC---chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccc
Q psy7309         158 NGPSTG---SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPIS  234 (454)
Q Consensus       158 ~~p~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f  234 (454)
                        |+..   ......+..+... ...++..    .|     ...++.+.+||     ++||..||++|||+.|+++||||
T Consensus       219 --Pf~~~~~~~~~~~~~~i~~~-~~~~~~~----~~-----~~~s~~~~~li-----~~~L~~dP~~R~t~~~il~hp~~  281 (342)
T 2qr7_A          219 --PFANGPDDTPEEILARIGSG-KFSLSGG----YW-----NSVSDTAKDLV-----SKMLHVDPHQRLTAALVLRHPWI  281 (342)
T ss_dssp             --SSCSSTTSCHHHHHHHHHHC-CCCCCST----TT-----TTSCHHHHHHH-----HHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             --CCCCCCcCCHHHHHHHHccC-CcccCcc----cc-----ccCCHHHHHHH-----HHHCCCChhHCcCHHHHhcCCee
Confidence              2221   1222233333322 2222221    11     12347778888     99999999999999999999999


Q ss_pred             cc
Q psy7309         235 LE  236 (454)
Q Consensus       235 ~~  236 (454)
                      ..
T Consensus       282 ~~  283 (342)
T 2qr7_A          282 VH  283 (342)
T ss_dssp             HT
T ss_pred             cC
Confidence            64


No 98 
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.94  E-value=4.4e-28  Score=242.26  Aligned_cols=183  Identities=24%  Similarity=0.345  Sum_probs=123.8

Q ss_pred             hHHHHHHHHHHHHHHHH--HcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           3 RAWRLLREIIEGLSHIH--SQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH--~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      .++.++.|++.||.|||  ++||+||||||+|||++. ++.+||+|||+|.....                         
T Consensus       130 ~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~-------------------------  184 (360)
T 3e3p_A          130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP-------------------------  184 (360)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT-------------------------
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC-------------------------
Confidence            57889999999999999  999999999999999997 88999999999975421                         


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHh
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNI  154 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i  154 (454)
                       .......+||+.|+|||++..  ...|+.++  ||||+              ||++|+|++|++     .....+...+
T Consensus       185 -~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~ell~g~~pf~~~~~~~~~~~~~  245 (360)
T 3e3p_A          185 -SEPNVAYICSRYYRAPELIFG--NQHYTTAV--DIWSV--------------GCIFAEMMLGEPIFRGDNSAGQLHEIV  245 (360)
T ss_dssp             -TSCCCSTTSCGGGCCHHHHTT--CSSCCTHH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             -CCCcccccCCcceeCHHHHcC--CCCCCcHH--HHHHH--------------HHHHHHHHhCCCCcCCCChHHHHHHHH
Confidence             223345688999999999861  34578888  99999              999999776554     1222232332


Q ss_pred             hhcCCCCCCchhhhhhhhhccCC-CCCCCccccccccccccccc---cccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         155 RRENGPSTGSNVQKSLQKFQKSP-PSVYREWRSSFEWSTVRNNI---KSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       155 ~~~~~p~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~---~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      ...+.|..     ..+..+.... ...+. ......|.......   .++.+.+||     .+||+.||.+|||+.|+|+
T Consensus       246 ~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li-----~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          246 RVLGCPSR-----EVLRKLNPSHTDVDLY-NSKGIPWSNVFSDHSLKDAKEAYDLL-----SALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHCCCCH-----HHHHHHCTTCCCGGGG-CCCCCCHHHHTTTCCCTTHHHHHHHH-----HHHTCSSGGGSCCHHHHTT
T ss_pred             HHcCCCCH-----HHHHhcccchhhcccc-ccccCCcccccchhhccccHHHHHHH-----HHHhccCccccCCHHHHhc
Confidence            22222211     1111111000 00000 01112333322221   235667777     9999999999999999999


Q ss_pred             CcccccCCCC
Q psy7309         231 QPISLEGSSS  240 (454)
Q Consensus       231 hp~f~~~~~~  240 (454)
                      ||||.....+
T Consensus       315 hp~f~~~~~~  324 (360)
T 3e3p_A          315 HPYFDELHDP  324 (360)
T ss_dssp             SGGGGGGGCT
T ss_pred             CccccccCCc
Confidence            9999987654


No 99 
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.94  E-value=2.7e-28  Score=241.45  Aligned_cols=162  Identities=26%  Similarity=0.388  Sum_probs=117.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc---CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY---EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~---~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|||++.....                        
T Consensus       131 ~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~------------------------  186 (327)
T 3lm5_A          131 NDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH------------------------  186 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC------------------------
Confidence            468899999999999999999999999999999997   78999999999985421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        .......+||+.|+|||++.   +..++.++  ||||+              |+++|+|++++.              
T Consensus       187 --~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~~ll~g~~--------------  231 (327)
T 3lm5_A          187 --ACELREIMGTPEYLAPEILN---YDPITTAT--DMWNI--------------GIIAYMLLTHTS--------------  231 (327)
T ss_dssp             ---------CCCGGGCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --ccccccccCCcCccCCeeec---CCCCCchh--hHHHH--------------HHHHHHHHhCCC--------------
Confidence              11233468999999999997   67788888  99999              999999776543              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                       |+...........+..... .++...    +     ...++.+.++|     .+||+.||.+|||++|+|+||||+...
T Consensus       232 -pf~~~~~~~~~~~i~~~~~-~~~~~~----~-----~~~~~~~~~li-----~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          232 -PFVGEDNQETYLNISQVNV-DYSEET----F-----SSVSQLATDFI-----QSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             -SSCCSSHHHHHHHHHHTCC-CCCTTT----T-----TTSCHHHHHHH-----HHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             -CCCCCCchHHHHHHHhccc-ccCchh----h-----cccCHHHHHHH-----HHHcCCChhhCcCHHHHhCCHhhcccc
Confidence             3333333322222221111 111110    0     11236667788     999999999999999999999998543


No 100
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.94  E-value=2e-27  Score=237.37  Aligned_cols=177  Identities=29%  Similarity=0.381  Sum_probs=120.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....                           
T Consensus       126 ~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~---------------------------  178 (353)
T 3coi_A          126 EKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA---------------------------  178 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCC---------------------------
Confidence            46889999999999999999999999999999999999999999999875321                           


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                       .....+||+.|+|||++..  ...++.++  ||||+              ||++|+|++|+..     ..+.+...+..
T Consensus       179 -~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~el~~g~~pf~~~~~~~~~~~i~~~  239 (353)
T 3coi_A          179 -EMTGYVVTRWYRAPEVILS--WMHYNQTV--DIWSV--------------GCIMAEMLTGKTLFKGKDYLDQLTQILKV  239 (353)
T ss_dssp             ------CCSBCCSCHHHHSC--CSCCCTTH--HHHHH--------------HHHHHHHHHSSCSSBSSCHHHHHHHHHHH
T ss_pred             -CccccccCcCcCCHHHHhC--cCCCCchh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence             2334678999999999872  25678888  99999              9999997665441     22233333222


Q ss_pred             cCCCCCC-------chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309         157 ENGPSTG-------SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL  229 (454)
Q Consensus       157 ~~~p~~~-------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l  229 (454)
                      .+.|...       .........+.......++...          ...++.+.++|     .+||+.||++|||++|++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~li-----~~~L~~dp~~Rpt~~e~l  304 (353)
T 3coi_A          240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLF----------PRASPQAADLL-----EKMLELDVDKRLTAAQAL  304 (353)
T ss_dssp             HCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTC----------TTSCHHHHHHH-----HHHSCSCTTTSCCHHHHH
T ss_pred             hCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhc----------CCcCHHHHHHH-----HHHcCCCcccCCCHHHHh
Confidence            2222110       0011111112111111121111          12246777888     999999999999999999


Q ss_pred             cCcccccCCC
Q psy7309         230 CQPISLEGSS  239 (454)
Q Consensus       230 ~hp~f~~~~~  239 (454)
                      +||||.....
T Consensus       305 ~hp~f~~~~~  314 (353)
T 3coi_A          305 THPFFEPFRD  314 (353)
T ss_dssp             TSGGGTTTCC
T ss_pred             cCcchhhccC
Confidence            9999986544


No 101
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.94  E-value=3.5e-28  Score=234.79  Aligned_cols=163  Identities=26%  Similarity=0.412  Sum_probs=121.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC---eEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH---VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~---vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.   +||+|||++.....                        
T Consensus       105 ~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~------------------------  160 (284)
T 3kk8_A          105 ADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND------------------------  160 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc------------------------
Confidence            367899999999999999999999999999999987665   99999999875421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        ........||+.|+|||++.   +..++.++  ||||+              |+++|++++|+.              
T Consensus       161 --~~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~g~~--------------  205 (284)
T 3kk8_A          161 --SEAWHGFAGTPGYLSPEVLK---KDPYSKPV--DIWAC--------------GVILYILLVGYP--------------  205 (284)
T ss_dssp             --SCBCCCSCSCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --CccccCCCCCcCCcCchhhc---CCCCCccc--chHHH--------------HHHHHHHHHCCC--------------
Confidence              12234467999999999998   66788888  99999              999999776543              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                       |+.+.........+.... ..++...    |     ...++...++|     .+||+.||++|||++|+++||||....
T Consensus       206 -pf~~~~~~~~~~~~~~~~-~~~~~~~----~-----~~~~~~~~~li-----~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          206 -PFWDEDQHRLYAQIKAGA-YDYPSPE----W-----DTVTPEAKSLI-----DSMLTVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             -SSCCSSHHHHHHHHHHTC-CCCCTTT----T-----TTSCHHHHHHH-----HHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             -CCCCCchhHHHHHHHhcc-ccCCchh----h-----cccCHHHHHHH-----HHHcccChhhCCCHHHHhcCccccCCh
Confidence             333333333333332221 1122110    1     11236677888     999999999999999999999998654


Q ss_pred             C
Q psy7309         239 S  239 (454)
Q Consensus       239 ~  239 (454)
                      .
T Consensus       270 ~  270 (284)
T 3kk8_A          270 R  270 (284)
T ss_dssp             C
T ss_pred             h
Confidence            3


No 102
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.94  E-value=3.4e-28  Score=235.80  Aligned_cols=158  Identities=31%  Similarity=0.393  Sum_probs=112.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE---ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI---DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++.....                        
T Consensus       124 ~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~------------------------  179 (285)
T 3is5_A          124 GYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS------------------------  179 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC------------------------
Confidence            3588999999999999999999999999999999   4457899999999975421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        ........||+.|+|||++.    ..++.++  ||||+              |+++|+|++|..              
T Consensus       180 --~~~~~~~~~t~~y~aPE~~~----~~~~~~~--Di~sl--------------G~il~~ll~g~~--------------  223 (285)
T 3is5_A          180 --DEHSTNAAGTALYMAPEVFK----RDVTFKC--DIWSA--------------GVVMYFLLTGCL--------------  223 (285)
T ss_dssp             ---------CTTGGGCCHHHHT----TCCCHHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --cccCcCcccccCcCChHHhc----cCCCccc--CeehH--------------HHHHHHHHhCCC--------------
Confidence              12234567999999999975    4577788  99999              999999766543              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                       |+.+............... .++...          ...++...++|     ++||+.||++|||+.|+|+||||++
T Consensus       224 -pf~~~~~~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~li-----~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          224 -PFTGTSLEEVQQKATYKEP-NYAVEC----------RPLTPQAVDLL-----KQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             -SSCCSSHHHHHHHHHHCCC-CCCC------------CCCCHHHHHHH-----HHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             -CCCCCCHHHHHhhhccCCc-cccccc----------CcCCHHHHHHH-----HHHccCChhhCcCHHHHhcCHHhhc
Confidence             3333333332222221111 111111          11236667788     9999999999999999999999985


No 103
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.94  E-value=3.6e-28  Score=243.07  Aligned_cols=162  Identities=25%  Similarity=0.363  Sum_probs=111.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc---CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY---EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~---~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      .+++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+++....                        
T Consensus       148 ~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~------------------------  203 (349)
T 2w4o_A          148 RDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH------------------------  203 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc------------------------
Confidence            468899999999999999999999999999999976   78999999999985421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        .......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|..              
T Consensus       204 --~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ell~g~~--------------  248 (349)
T 2w4o_A          204 --QVLMKTVCGTPGYCAPEILR---GCAYGPEV--DMWSV--------------GIITYILLCGFE--------------  248 (349)
T ss_dssp             -----------CGGGSCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --ccccccccCCCCccCHHHhc---CCCCCccc--chHHH--------------HHHHHHHHhCCC--------------
Confidence              12234568999999999998   66788888  99999              999999776543              


Q ss_pred             CCCCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         159 GPSTGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       159 ~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       |+...... .....+........+..     |     ...+..+.+||     ++||+.||++|||+.|+|+||||...
T Consensus       249 -pf~~~~~~~~~~~~i~~~~~~~~~~~-----~-----~~~~~~~~~li-----~~~L~~dP~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          249 -PFYDERGDQFMFRRILNCEYYFISPW-----W-----DEVSLNAKDLV-----RKLIVLDPKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             -TTCCTTCHHHHHHHHHTTCCCCCTTT-----T-----TTSCHHHHHHH-----HTTSCSSGGGSCCHHHHHHSTTTTST
T ss_pred             -CCCCCcccHHHHHHHHhCCCccCCch-----h-----hhCCHHHHHHH-----HHHccCChhhCcCHHHHhcCcccCCC
Confidence             22222111 12222222221111111     1     11236677888     99999999999999999999999854


Q ss_pred             C
Q psy7309         238 S  238 (454)
Q Consensus       238 ~  238 (454)
                      .
T Consensus       313 ~  313 (349)
T 2w4o_A          313 A  313 (349)
T ss_dssp             T
T ss_pred             c
Confidence            4


No 104
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.94  E-value=4.2e-28  Score=253.18  Aligned_cols=161  Identities=30%  Similarity=0.475  Sum_probs=121.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc---CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY---EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~---~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.+++||+.||.|||++||+||||||+|||++.   ++.+||+|||+|+...                         
T Consensus       121 ~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-------------------------  175 (486)
T 3mwu_A          121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ-------------------------  175 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC-------------------------
Confidence            368899999999999999999999999999999954   4579999999997542                         


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                       ........+||+.|+|||++.    ..|+.++  ||||+              ||++|+|++|.+              
T Consensus       176 -~~~~~~~~~gt~~y~aPE~~~----~~~~~~~--Diwsl--------------G~il~~ll~g~~--------------  220 (486)
T 3mwu_A          176 -QNTKMKDRIGTAYYIAPEVLR----GTYDEKC--DVWSA--------------GVILYILLSGTP--------------  220 (486)
T ss_dssp             -CC----CCTTGGGGCCGGGGG----SCCCHHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             -CCCccCCCcCCCCCCCHHHhC----CCCCchh--hHHHH--------------HHHHHHHHhCCC--------------
Confidence             122344568999999999986    3588888  99999              999999776543              


Q ss_pred             CCCCCchhhhhhhhhccCCCC-CCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPS-VYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       |+.+.+....+..+...... ..|.      |.     ..++.+.+||     ++||+.||++|||+.|+|+||||...
T Consensus       221 -pf~~~~~~~~~~~i~~~~~~~~~~~------~~-----~~s~~~~~li-----~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          221 -PFYGKNEYDILKRVETGKYAFDLPQ------WR-----TISDDAKDLI-----RKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             -SSCCSSHHHHHHHHHHTCCCSCSGG------GG-----GSCHHHHHHH-----HHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             -CCCCCCHHHHHHHHHhCCCCCCCcc------cC-----CCCHHHHHHH-----HHHcCCChhhCcCHHHHhcCHhhccC
Confidence             44444444444444432211 1121      22     2346778888     99999999999999999999999875


Q ss_pred             CC
Q psy7309         238 SS  239 (454)
Q Consensus       238 ~~  239 (454)
                      ..
T Consensus       284 ~~  285 (486)
T 3mwu_A          284 SS  285 (486)
T ss_dssp             CC
T ss_pred             cc
Confidence            54


No 105
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.94  E-value=2.4e-28  Score=241.96  Aligned_cols=170  Identities=26%  Similarity=0.339  Sum_probs=104.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||+++...                         
T Consensus       106 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~-------------------------  160 (325)
T 3kn6_A          106 TEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP-------------------------  160 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecC-------------------------
Confidence            36889999999999999999999999999999998766   79999999997432                         


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                      .........+||+.|+|||++.   +..|+.++  ||||+              ||++|+|++|..+....-        
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~~ll~g~~pf~~~~--------  213 (325)
T 3kn6_A          161 PDNQPLKTPCFTLHYAAPELLN---QNGYDESC--DLWSL--------------GVILYTMLSGQVPFQSHD--------  213 (325)
T ss_dssp             C-------------------------CCCCHHH--HHHHH--------------HHHHHHHHHSSCTTC-----------
T ss_pred             CCCCcccccCCCcCccCHHHhc---CCCCCCcc--chHHH--------------HHHHHHHHhCCCCCCCCc--------
Confidence            1122344568899999999997   67788888  99999              999999776654221100        


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      ..............+... ...++..    .|.     ..++.+.+||     ++||+.||++|||++|+++||||....
T Consensus       214 ~~~~~~~~~~~~~~i~~~-~~~~~~~----~~~-----~~s~~~~~li-----~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          214 RSLTCTSAVEIMKKIKKG-DFSFEGE----AWK-----NVSQEAKDLI-----QGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             ----CCCHHHHHHHHTTT-CCCCCSH----HHH-----TSCHHHHHHH-----HHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             cccccccHHHHHHHHHcC-CCCCCcc----ccc-----CCCHHHHHHH-----HHHCCCChhHCCCHHHHhcChhhccCc
Confidence            000011122233333322 2222221    121     2346777888     999999999999999999999998654


No 106
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.94  E-value=1.9e-28  Score=247.56  Aligned_cols=181  Identities=19%  Similarity=0.239  Sum_probs=116.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCC-----------------------------------------
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYED-----------------------------------------   39 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~-----------------------------------------   39 (454)
                      ..++.++.||+.||+|||++ ||+||||||+|||++.++                                         
T Consensus       146 ~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (397)
T 1wak_A          146 PCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPL  225 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccc
Confidence            46889999999999999998 999999999999998775                                         


Q ss_pred             --------CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccC
Q psy7309          40 --------HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFT  111 (454)
Q Consensus        40 --------~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~  111 (454)
                              .+||+|||+|....                            ......+||+.|+|||++.   +..|+.++
T Consensus       226 ~~~~~~~~~~kl~DfG~a~~~~----------------------------~~~~~~~gt~~y~aPE~~~---~~~~~~~~  274 (397)
T 1wak_A          226 EPKNAEKLKVKIADLGNACWVH----------------------------KHFTEDIQTRQYRSLEVLI---GSGYNTPA  274 (397)
T ss_dssp             SGGGGGGCCEEECCGGGCEETT----------------------------BCSCSCCSCGGGCCHHHHH---TSCCCTHH
T ss_pred             ccccccccceEecccccccccc----------------------------ccCccCCCCCcccCChhhc---CCCCCcHH
Confidence                    79999999997542                            1234458999999999998   66788888


Q ss_pred             CccccchhhhHHHHHHHHHhcceeeeeecCCchh-----------hHHHHHHHhhhcCCCCCCchhhhh-hhhhccCCCC
Q psy7309         112 PQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----------TLEELKHNIRRENGPSTGSNVQKS-LQKFQKSPPS  179 (454)
Q Consensus       112 ~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----------~~~~l~~~i~~~~~p~~~~~~~~~-~~~~~~~~~~  179 (454)
                        ||||+              ||++|||++|++.           ....+...+...+.++........ ...+. ....
T Consensus       275 --Diwsl--------------G~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~  337 (397)
T 1wak_A          275 --DIWST--------------ACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF-TKKG  337 (397)
T ss_dssp             --HHHHH--------------HHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTB-CTTS
T ss_pred             --HHHHH--------------HHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccccc-CCcc
Confidence              99999              8888887665431           222332222222222111000000 00000 0000


Q ss_pred             CCCcccccccccc---cc-----ccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         180 VYREWRSSFEWST---VR-----NNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       180 ~~p~~~~~~~~~~---~~-----~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      ..........|..   +.     ....++.+.+||     .+||+.||++|||++|+|+||||.
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          338 DLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFL-----LPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             SBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHH-----GGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             ccccccccCCcchhHhhhhhcccchhhHHHHHHHH-----HHHhccChhhcCCHHHHhhCcccc
Confidence            0000000001100   00     011123455666     999999999999999999999996


No 107
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.94  E-value=1.7e-28  Score=247.88  Aligned_cols=159  Identities=26%  Similarity=0.299  Sum_probs=119.1

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE--ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI--DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl--~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      .++.++.||+.||+|||++||+||||||+|||+  +.++.+||+|||+++....                          
T Consensus       188 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~--------------------------  241 (373)
T 2x4f_A          188 DTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP--------------------------  241 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC--------------------------
Confidence            578899999999999999999999999999999  5567899999999985421                          


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+||+.|+|||++.   +..++.++  ||||+              ||++|||++|..               |
T Consensus       242 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~elltg~~---------------p  287 (373)
T 2x4f_A          242 REKLKVNFGTPEFLAPEVVN---YDFVSFPT--DMWSV--------------GVIAYMLLSGLS---------------P  287 (373)
T ss_dssp             TCBCCCCCSSCTTCCHHHHT---TCBCCHHH--HHHHH--------------HHHHHHHHHSSC---------------T
T ss_pred             ccccccccCCCcEeChhhcc---CCCCCcHH--hHHHH--------------HHHHHHHHhCCC---------------C
Confidence            12233457999999999987   66788888  99999              999999776543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      +.+.+....+..+..... .++..    .|     ...++.+.+||     .+||+.||.+|||++|+|+||||..
T Consensus       288 f~~~~~~~~~~~i~~~~~-~~~~~----~~-----~~~~~~~~~li-----~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          288 FLGDNDAETLNNILACRW-DLEDE----EF-----QDISEEAKEFI-----SKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             TCCSSHHHHHHHHHHTCC-CSCSG----GG-----TTSCHHHHHHH-----HTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             CCCCCHHHHHHHHHhccC-CCChh----hh-----ccCCHHHHHHH-----HHHcCCChhhCCCHHHHhcCcCcCC
Confidence            333333333333322211 11111    01     11236777888     9999999999999999999999984


No 108
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.94  E-value=3.8e-28  Score=241.26  Aligned_cols=169  Identities=24%  Similarity=0.357  Sum_probs=119.0

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC--CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED--HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~--~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      .++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|..+.....                     ..
T Consensus       169 ~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~---------------------~~  227 (345)
T 3hko_A          169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN---------------------GE  227 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTC---------------------C-
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCc---------------------cc
Confidence            5788999999999999999999999999999998776  899999999986532110                     11


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ........||+.|+|||++.. ....|+.++  ||||+              |+++|||++|+.               |
T Consensus       228 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~--Diwsl--------------G~il~el~~g~~---------------p  275 (345)
T 3hko_A          228 YYGMTTKAGTPYFVAPEVLNT-TNESYGPKC--DAWSA--------------GVLLHLLLMGAV---------------P  275 (345)
T ss_dssp             -------CCCGGGCCHHHHTC-SSSCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             cccccccCCCccccCchhhcc-CCCCCCcHH--HHHHH--------------HHHHHHHHHCCC---------------C
Confidence            123445689999999999862 135678888  99999              999999766543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +.+.........+..... .++..    .|     ...++.+.++|     .+||+.||.+|||+.|+|+||||.....
T Consensus       276 f~~~~~~~~~~~~~~~~~-~~~~~----~~-----~~~~~~~~~li-----~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          276 FPGVNDADTISQVLNKKL-CFENP----NY-----NVLSPLARDLL-----SNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             SCCSSHHHHHHHHHHCCC-CTTSG----GG-----GGSCHHHHHHH-----HHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             CCCCChHHHHHHHHhccc-ccCCc----cc-----ccCCHHHHHHH-----HHHcCCChhHCCCHHHHhcChhhccChH
Confidence            333333333333222211 11111    01     11236677888     9999999999999999999999986553


No 109
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.94  E-value=3.3e-28  Score=246.42  Aligned_cols=196  Identities=15%  Similarity=0.167  Sum_probs=116.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++.+||+|||.+........                  ......
T Consensus       128 ~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~------------------~~~~~~  189 (389)
T 3gni_B          128 LAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ------------------RQRVVH  189 (389)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE------------------ECSCBC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccc------------------cccccc
Confidence            36889999999999999999999999999999999999999999999875421100                  000112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhH-----HHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTL-----EELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~-----~~l~~~i~~  156 (454)
                      ......+||+.|+|||++... ...|+.++  ||||+              ||++|||++|+++..     ..+...+..
T Consensus       190 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~--Diwsl--------------G~il~el~~g~~pf~~~~~~~~~~~~~~~  252 (389)
T 3gni_B          190 DFPKYSVKVLPWLSPEVLQQN-LQGYDAKS--DIYSV--------------GITACELANGHVPFKDMPATQMLLEKLNG  252 (389)
T ss_dssp             CCCTTCTTTGGGSCHHHHSTT-SSCBCTHH--HHHHH--------------HHHHHHHHHSSCTTTTCCSTTHHHHC---
T ss_pred             cccccccccccccCHHHHhcc-CCCCCcHh--HHHHH--------------HHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence            233445899999999998721 15688888  99999              999999776554211     011110000


Q ss_pred             cCCCCCCc---hhhhhh----hh-----hccC--CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCC
Q psy7309         157 ENGPSTGS---NVQKSL----QK-----FQKS--PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKR  222 (454)
Q Consensus       157 ~~~p~~~~---~~~~~~----~~-----~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~R  222 (454)
                      ........   ......    ..     +...  .....+...  ...........++.+.+||     ++||+.||++|
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~li-----~~~L~~dP~~R  325 (389)
T 3gni_B          253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG--DSPSHPYHRTFSPHFHHFV-----EQCLQRNPDAR  325 (389)
T ss_dssp             -------------------------------------------------------CCHHHHHHH-----HHHTCSCTTTS
T ss_pred             CCCccccccccccccccccccccccccccccccccCccccccC--CCCCCccccccCHHHHHHH-----HHHhhcCcccC
Confidence            00000000   000000    00     0000  000000000  0000001122346677788     99999999999


Q ss_pred             CChhhhhcCcccccCCC
Q psy7309         223 PSSEQNLCQPISLEGSS  239 (454)
Q Consensus       223 pta~e~l~hp~f~~~~~  239 (454)
                      ||++|+|+||||.....
T Consensus       326 pta~ell~hp~f~~~~~  342 (389)
T 3gni_B          326 PSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             CCHHHHTTSGGGGGC--
T ss_pred             CCHHHHhcCHHHHHHhh
Confidence            99999999999987554


No 110
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.94  E-value=2.3e-28  Score=235.86  Aligned_cols=159  Identities=28%  Similarity=0.429  Sum_probs=120.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....                           .
T Consensus       109 ~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~---------------------------~  161 (279)
T 3fdn_A          109 QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---------------------------S  161 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCC---------------------------c
Confidence            3678999999999999999999999999999999999999999999986432                           1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++|..               |+
T Consensus       162 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p~  207 (279)
T 3fdn_A          162 SRRTDLCGTLDYLPPEMIE---GRMHDEKV--DLWSL--------------GVLCYEFLVGKP---------------PF  207 (279)
T ss_dssp             ------CCCCTTCCHHHHT---TCCCCTTH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             ccccccCCCCCccCHhHhc---cCCCCccc--hhHhH--------------HHHHHHHHHCCC---------------CC
Confidence            1234457899999999987   66778888  99999              999999766543               33


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  240 (454)
                      ...........+.. ....+|..             .++...++|     .+||+.||++|||++|+++||||......
T Consensus       208 ~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~e~l~h~~~~~~~~~  267 (279)
T 3fdn_A          208 EANTYQETYKRISR-VEFTFPDF-------------VTEGARDLI-----SRLLKHNPSQRPMLREVLEHPWITANSSK  267 (279)
T ss_dssp             CCSSHHHHHHHHHH-TCCCCCTT-------------SCHHHHHHH-----HHHCCSSGGGSCCHHHHHHCHHHHHHCSS
T ss_pred             CCCcHHHHHHHHHh-CCCCCCCc-------------CCHHHHHHH-----HHHhccChhhCCCHHHHhhCccccCCccC
Confidence            33333333333332 22223332             226667888     99999999999999999999999976543


No 111
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.94  E-value=2.5e-28  Score=250.29  Aligned_cols=163  Identities=26%  Similarity=0.342  Sum_probs=111.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||+|+....                        
T Consensus       239 ~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~------------------------  294 (419)
T 3i6u_A          239 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------------------------  294 (419)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCC------------------------
Confidence            46889999999999999999999999999999997655   499999999985421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        .......+||+.|+|||++.......|+.++  ||||+              ||++|+|++|.+              
T Consensus       295 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Diwsl--------------G~il~~lltg~~--------------  342 (419)
T 3i6u_A          295 --TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV--DCWSL--------------GVILFICLSGYP--------------  342 (419)
T ss_dssp             ------------CTTCCTTTTC----CTTHHHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --CccccccCCCCCccCceeeecCCCCCCCchh--hhHhH--------------HHHHHHHHHCCC--------------
Confidence              2233456899999999998633346788888  99999              999999776553              


Q ss_pred             CCCCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         159 GPSTGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       159 ~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                       |+...... .....+........+..     |     ...++.+.+||     ++||+.||++|||++|+|+||||..
T Consensus       343 -pf~~~~~~~~~~~~i~~~~~~~~~~~-----~-----~~~~~~~~~li-----~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          343 -PFSEHRTQVSLKDQITSGKYNFIPEV-----W-----AEVSEKALDLV-----KKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             -SSCCCSSSCCHHHHHHTTCCCCCHHH-----H-----TTSCHHHHHHH-----HHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             -CCCCCcchHHHHHHHhcCCCCCCchh-----h-----cccCHHHHHHH-----HHHccCChhHCcCHHHHhCCcccCC
Confidence             22222111 11112221111111111     1     12236677888     9999999999999999999999973


No 112
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94  E-value=1e-28  Score=249.35  Aligned_cols=148  Identities=17%  Similarity=0.166  Sum_probs=113.0

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      .++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...                            .
T Consensus       207 ~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~----------------------------~  258 (377)
T 3byv_A          207 ARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----------------------------A  258 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETT----------------------------C
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecC----------------------------C
Confidence            467899999999999999999999999999999999999999999997431                            1


Q ss_pred             CCcCcccccceeccccccccccc-----------cccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHH
Q psy7309          83 SHTGQVGTALYAAPELDSHGVKA-----------MYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELK  151 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~~~~-----------~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~  151 (454)
                      .....+| +.|+|||++.   +.           .|+.++  ||||+              ||++|||++|+.+      
T Consensus       259 ~~~~~~g-~~y~aPE~~~---~~~~~~~~~~~~~~~~~~~--DvwSl--------------G~il~elltg~~P------  312 (377)
T 3byv_A          259 RVVSSVS-RGFEPPELEA---RRATISYHRDRRTLMTFSF--DAWAL--------------GLVIYWIWCADLP------  312 (377)
T ss_dssp             EEECCCC-TTCCCHHHHH---HHTSTHHHHCCEEECCHHH--HHHHH--------------HHHHHHHHHSSCC------
T ss_pred             cccCCCC-cCccChhhhc---ccccccccccccccCChhh--hHHHH--------------HHHHHHHHHCCCC------
Confidence            2344577 9999999998   44           788888  99999              9999998776542      


Q ss_pred             HHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         152 HNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       152 ~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                               +.+.........+...     +             ...++...++|     .+||+.||++|||+.|+++|
T Consensus       313 ---------f~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~li-----~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          313 ---------ITKDAALGGSEWIFRS-----C-------------KNIPQPVRALL-----EGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             ---------C------CCSGGGGSS-----C-------------CCCCHHHHHHH-----HHHTCSSGGGCCCHHHHHTS
T ss_pred             ---------Ccccccccchhhhhhh-----c-------------cCCCHHHHHHH-----HHHcCCCchhCCCHHHHhhC
Confidence                     2221111111111100     0             11236677888     99999999999999999999


Q ss_pred             ccccc
Q psy7309         232 PISLE  236 (454)
Q Consensus       232 p~f~~  236 (454)
                      |||..
T Consensus       361 p~f~~  365 (377)
T 3byv_A          361 PEYEQ  365 (377)
T ss_dssp             HHHHH
T ss_pred             hHHHH
Confidence            99984


No 113
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.94  E-value=4.7e-28  Score=237.14  Aligned_cols=186  Identities=22%  Similarity=0.223  Sum_probs=114.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....                         ..
T Consensus       102 ~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-------------------------~~  156 (311)
T 4agu_A          102 HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG-------------------------PS  156 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC-------------------------cc
Confidence            35889999999999999999999999999999999999999999999975421                         12


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...|+.++  ||||+              |+++|++++|.++     ..+.+......
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~~l~~g~~p~~~~~~~~~~~~~~~~  218 (311)
T 4agu_A          157 DYYDDEVATRWYRSPELLVG--DTQYGPPV--DVWAI--------------GCVFAELLSGVPLWPGKSDVDQLYLIRKT  218 (311)
T ss_dssp             ---------GGGCCHHHHHT--CSCCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccCCCcCCccccChHHHhc--CCCCCcch--hhHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            22345689999999999861  35678888  99999              9999997665431     11222111111


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      ................+........+....  .+.... ...++.+.+||     ++||+.||++|||++|+++||||..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~li-----~~~L~~dP~~Rpt~~ell~hp~f~~  290 (311)
T 4agu_A          219 LGDLIPRHQQVFSTNQYFSGVKIPDPEDME--PLELKF-PNISYPALGLL-----KGCLHMDPTERLTCEQLLHHPYFEN  290 (311)
T ss_dssp             HCSCCHHHHHHHHTCGGGTTCCCCCCSSCC--CHHHHC-TTCCHHHHHHH-----HHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred             hcccccccccccccccccccCcCCCccccc--hhhhhc-ccccHHHHHHH-----HHHccCChhhcCCHHHHhcChHHHh
Confidence            111110000000000011111111111110  000000 12335566777     9999999999999999999999985


Q ss_pred             CC
Q psy7309         237 GS  238 (454)
Q Consensus       237 ~~  238 (454)
                      ..
T Consensus       291 ~~  292 (311)
T 4agu_A          291 IR  292 (311)
T ss_dssp             CC
T ss_pred             cc
Confidence            43


No 114
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.94  E-value=2.6e-28  Score=254.47  Aligned_cols=161  Identities=29%  Similarity=0.447  Sum_probs=124.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE---ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI---DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.+++||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+....                        
T Consensus       126 ~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~------------------------  181 (484)
T 3nyv_A          126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA------------------------  181 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc------------------------
Confidence            3678999999999999999999999999999999   4567899999999986521                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        .......+||+.|+|||++.    +.|+.++  ||||+              ||++|+|++|.+              
T Consensus       182 --~~~~~~~~gt~~y~aPE~~~----~~~~~~~--Diwsl--------------G~il~~ll~g~~--------------  225 (484)
T 3nyv_A          182 --SKKMKDKIGTAYYIAPEVLH----GTYDEKC--DVWST--------------GVILYILLSGCP--------------  225 (484)
T ss_dssp             --CCSHHHHTTGGGTCCHHHHH----TCCCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --ccccccCCCCccccCceeec----CCCCCcc--eeHHH--------------HHHHHHHHHCCC--------------
Confidence              22344568999999999986    3688888  99999              999999776543              


Q ss_pred             CCCCCchhhhhhhhhccCCCC-CCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPS-VYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       |+.+.+....+..+...... ..|.      |.     ..++.+.+||     ++||+.||++|||++|+|+||||...
T Consensus       226 -pf~~~~~~~~~~~i~~~~~~~~~~~------~~-----~~s~~~~~li-----~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          226 -PFNGANEYDILKKVEKGKYTFELPQ------WK-----KVSESAKDLI-----RKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             -SSCCSSHHHHHHHHHHCCCCCCSGG------GG-----GSCHHHHHHH-----HHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             -CCCCCCHHHHHHHHHcCCCCCCCcc------cc-----cCCHHHHHHH-----HHHCCCChhHCcCHHHHhhChhhccc
Confidence             44444444444444433211 1121      21     2346778888     99999999999999999999999865


Q ss_pred             CC
Q psy7309         238 SS  239 (454)
Q Consensus       238 ~~  239 (454)
                      ..
T Consensus       289 ~~  290 (484)
T 3nyv_A          289 TK  290 (484)
T ss_dssp             TC
T ss_pred             cc
Confidence            43


No 115
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.94  E-value=4.1e-28  Score=241.35  Aligned_cols=164  Identities=21%  Similarity=0.223  Sum_probs=122.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....                          .
T Consensus       130 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~--------------------------~  183 (335)
T 3dls_A          130 PLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER--------------------------G  183 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT--------------------------T
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC--------------------------C
Confidence            36789999999999999999999999999999999999999999999975421                          2


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......+||+.|+|||++.   +..+ +.++  ||||+              ||++|+|+++..               |
T Consensus       184 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~~--Diwsl--------------G~il~el~~g~~---------------p  229 (335)
T 3dls_A          184 KLFYTFCGTIEYCAPEVLM---GNPYRGPEL--EMWSL--------------GVTLYTLVFEEN---------------P  229 (335)
T ss_dssp             CCBCEECSCGGGCCHHHHT---TCCBCSHHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             CceeccCCCccccChhhhc---CCCCCCCcc--cchhH--------------HHHHHHHHhCCC---------------c
Confidence            2334568999999999987   4555 6777  99999              999999766543               2


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  240 (454)
                      +....  ..   .  ......|..             .++.+.++|     .+||+.||++|||++|+++||||..... 
T Consensus       230 f~~~~--~~---~--~~~~~~~~~-------------~~~~l~~li-----~~~L~~dP~~Rps~~ell~hp~~~~~~~-  283 (335)
T 3dls_A          230 FCELE--ET---V--EAAIHPPYL-------------VSKELMSLV-----SGLLQPVPERRTTLEKLVTDPWVTQPVN-  283 (335)
T ss_dssp             CSSGG--GG---T--TTCCCCSSC-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHCTTTTCCCC-
T ss_pred             hhhHH--HH---H--hhccCCCcc-------------cCHHHHHHH-----HHHccCChhhCcCHHHHhcCccccCCcc-
Confidence            21110  00   0  111111111             236677888     9999999999999999999999986443 


Q ss_pred             CCCccCcccccc
Q psy7309         241 GLSVLGSEQLLT  252 (454)
Q Consensus       241 ~~~~~~~~~ll~  252 (454)
                       ...++|+++..
T Consensus       284 -~~~~~~~~~~~  294 (335)
T 3dls_A          284 -LADYTWEEVFR  294 (335)
T ss_dssp             -GGGCCHHHHC-
T ss_pred             -ccccCHHHHhh
Confidence             34455665554


No 116
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.94  E-value=4.1e-28  Score=233.74  Aligned_cols=160  Identities=29%  Similarity=0.406  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....                         ..
T Consensus       112 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~-------------------------~~  166 (278)
T 3cok_A          112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM-------------------------PH  166 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC-------------------------CC
Confidence            46889999999999999999999999999999999999999999999875421                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+++++++               |+
T Consensus       167 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p~  212 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIAT---RSAHGLES--DVWSL--------------GCMFYTLLIGRP---------------PF  212 (278)
T ss_dssp             ----------------------------CT--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             CcceeccCCCCcCCcchhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            1223467999999999987   66778888  99999              999999766543               22


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      ...........+.. .....|.             ..+....++|     .+||+.||++|||++|+++||||.....
T Consensus       213 ~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~~~~li-----~~~l~~dp~~Rps~~~~l~h~~~~~~~~  271 (278)
T 3cok_A          213 DTDTVKNTLNKVVL-ADYEMPS-------------FLSIEAKDLI-----HQLLRRNPADRLSLSSVLDHPFMSRNSS  271 (278)
T ss_dssp             CCCSCC-----CCS-SCCCCCT-------------TSCHHHHHHH-----HHHSCSSGGGSCCHHHHTTSTTTC----
T ss_pred             CChhHHHHHHHHhh-cccCCcc-------------ccCHHHHHHH-----HHHcccCHhhCCCHHHHhcCccccCCCC
Confidence            22222222221111 1111222             1236667888     9999999999999999999999986543


No 117
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.94  E-value=5.4e-28  Score=238.41  Aligned_cols=160  Identities=24%  Similarity=0.364  Sum_probs=120.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC----CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED----HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++    .+||+|||++.....                       
T Consensus       115 ~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~-----------------------  171 (321)
T 2a2a_A          115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-----------------------  171 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc-----------------------
Confidence            46889999999999999999999999999999999888    799999999975421                       


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE  157 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~  157 (454)
                         ........||+.|+|||++.   +..++.++  ||||+              |+++|+|++|..             
T Consensus       172 ---~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~-------------  216 (321)
T 2a2a_A          172 ---GVEFKNIFGTPEFVAPEIVN---YEPLGLEA--DMWSI--------------GVITYILLSGAS-------------  216 (321)
T ss_dssp             ---TCCCCCCCSCGGGCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSCC-------------
T ss_pred             ---cccccccCCCCCccCccccc---CCCCCCcc--ccHHH--------------HHHHHHHHHCCC-------------
Confidence               12234567999999999987   66788888  99999              999999776543             


Q ss_pred             CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                        |+.+......+..+... ...++...    +     ...++.+.++|     .+||+.||++|||++|+++||||..
T Consensus       217 --pf~~~~~~~~~~~i~~~-~~~~~~~~----~-----~~~~~~~~~li-----~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          217 --PFLGDTKQETLANITSV-SYDFDEEF----F-----SHTSELAKDFI-----RKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             --SSCCSSHHHHHHHHHTT-CCCCCHHH----H-----TTCCHHHHHHH-----HTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             --CCCCCCHHHHHHHHHhc-ccccChhh----h-----cccCHHHHHHH-----HHHcCCChhhCcCHHHHhcCccccC
Confidence              33333333333333322 12222111    0     12236677888     9999999999999999999999974


No 118
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.94  E-value=1.1e-27  Score=239.93  Aligned_cols=185  Identities=25%  Similarity=0.361  Sum_probs=117.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....                          .
T Consensus       134 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~--------------------------~  187 (362)
T 3pg1_A          134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTA--------------------------D  187 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccc--------------------------c
Confidence            46889999999999999999999999999999999999999999999974321                          2


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      .......||+.|+|||++..  ...++.++  ||||+              ||++|++++|+.     .....+...+..
T Consensus       188 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~l~~g~~pf~~~~~~~~~~~i~~~  249 (362)
T 3pg1_A          188 ANKTHYVTHRWYRAPELVMQ--FKGFTKLV--DMWSA--------------GCVMAEMFNRKALFRGSTFYNQLNKIVEV  249 (362)
T ss_dssp             --------CGGGCCHHHHTT--CTTCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccceecccceecCcHHhcC--CCCCCcHh--HHHhH--------------HHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            23345689999999999872  25678888  99999              999999766543     122223222222


Q ss_pred             cCCCCCCchhh---hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309         157 ENGPSTGSNVQ---KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI  233 (454)
Q Consensus       157 ~~~p~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~  233 (454)
                      .+.|.......   .....+........+.    ..|..... ..++...+||     .+||+.||++|||++|+++|||
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~li-----~~~L~~dP~~Rpt~~ell~hp~  319 (362)
T 3pg1_A          250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPA----RAWTAVVP-TADPVALDLI-----AKMLEFNPQRRISTEQALRHPY  319 (362)
T ss_dssp             HCCCCHHHHHHTSCHHHHHHTTTCCCCCCC----CCHHHHST-TSCHHHHHHH-----HHHTCSSGGGSCCHHHHHTSGG
T ss_pred             cCCCChHHhhhccchhhhHHHHhhcccCCh----hhHHhhCC-CCCHHHHHHH-----HHHhcCChhhCCCHHHHHcCch
Confidence            22222110000   0001111111111111    12222221 2236677777     9999999999999999999999


Q ss_pred             cccCCCC
Q psy7309         234 SLEGSSS  240 (454)
Q Consensus       234 f~~~~~~  240 (454)
                      |.....+
T Consensus       320 f~~~~~~  326 (362)
T 3pg1_A          320 FESLFDP  326 (362)
T ss_dssp             GTTTCCG
T ss_pred             hhhccCc
Confidence            9976543


No 119
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.94  E-value=6e-28  Score=238.37  Aligned_cols=184  Identities=21%  Similarity=0.292  Sum_probs=119.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC-CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED-HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~-~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+....                          
T Consensus       130 ~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~--------------------------  183 (330)
T 3nsz_A          130 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP--------------------------  183 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC--------------------------
Confidence            35789999999999999999999999999999999777 899999999975421                          


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh------hHHHHHHHh
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK------TLEELKHNI  154 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~------~~~~l~~~i  154 (454)
                      .......+||+.|+|||++..  ...++.++  ||||+              ||++|+|++|+.+      ..+.+....
T Consensus       184 ~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~~ll~g~~p~~~~~~~~~~l~~~~  245 (330)
T 3nsz_A          184 GQEYNVRVASRYFKGPELLVD--YQMYDYSL--DMWSL--------------GCMLASMIFRKEPFFHGHDNYDQLVRIA  245 (330)
T ss_dssp             TCCCCSCCSCGGGCCHHHHTT--CCCCCTHH--HHHHH--------------HHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             CCccccccccccccChhhhcC--CCcCCchh--hHHHH--------------HHHHHHHHhCCCCcccCCchHHHHHHHH
Confidence            223345689999999999871  25688888  99999              9999997665431      122222211


Q ss_pred             hhcCCCCCCchhhhhhhhhccCCCCCCCc---ccccccccccc----ccccccchhHHHHHHHHhhhcCCCCCCCCChhh
Q psy7309         155 RRENGPSTGSNVQKSLQKFQKSPPSVYRE---WRSSFEWSTVR----NNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQ  227 (454)
Q Consensus       155 ~~~~~p~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~~~~----~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e  227 (454)
                      ...+.+    ................+..   ......|....    ....++.+.+||     ++||+.||++|||++|
T Consensus       246 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~~L~~dP~~Rpta~e  316 (330)
T 3nsz_A          246 KVLGTE----DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL-----DKLLRYDHQSRLTARE  316 (330)
T ss_dssp             HHHCHH----HHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHH-----HTTSCSSGGGSCCHHH
T ss_pred             HhcCCc----hhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHH-----HHHhcCCcccCCCHHH
Confidence            111100    0000000000000000000   00001121111    112346777888     9999999999999999


Q ss_pred             hhcCcccccCC
Q psy7309         228 NLCQPISLEGS  238 (454)
Q Consensus       228 ~l~hp~f~~~~  238 (454)
                      +|+||||....
T Consensus       317 ~l~hp~f~~~~  327 (330)
T 3nsz_A          317 AMEHPYFYTVV  327 (330)
T ss_dssp             HHTSGGGTTCC
T ss_pred             HhcCccHhhhc
Confidence            99999998543


No 120
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.94  E-value=3.6e-28  Score=245.82  Aligned_cols=96  Identities=24%  Similarity=0.371  Sum_probs=81.4

Q ss_pred             hhHHHHHHHHHHHHHHHH--HcCCcccCCCCCcEEEc--cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIH--SQGIIHRDLKPVNIFID--YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH--~~giiHrDLKp~NILl~--~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      ..++.++.|++.||.|||  +.||+||||||+|||++  .++.+||+|||+|+...                        
T Consensus       157 ~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~------------------------  212 (382)
T 2vx3_A          157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG------------------------  212 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT------------------------
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc------------------------
Confidence            467899999999999999  57999999999999995  46789999999997542                        


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP  144 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~  144 (454)
                          ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|++
T Consensus       213 ----~~~~~~~~t~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~elltg~~  256 (382)
T 2vx3_A          213 ----QRIYQYIQSRFYRSPEVLL---GMPYDLAI--DMWSL--------------GCILVEMHTGEP  256 (382)
T ss_dssp             ----CCCCSSCSCGGGCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSSC
T ss_pred             ----cccccccCCccccChHHHc---CCCCCcHH--HHHHH--------------HHHHHHHHhCCC
Confidence                1234568999999999998   66788888  99999              999999776654


No 121
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.94  E-value=2.4e-27  Score=230.65  Aligned_cols=185  Identities=26%  Similarity=0.365  Sum_probs=123.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....                         ..
T Consensus       103 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~-------------------------~~  157 (299)
T 2r3i_A          103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-------------------------PV  157 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC-------------------------CS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccC-------------------------Cc
Confidence            35789999999999999999999999999999999999999999999986531                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      .......||+.|+|||++..  ...++.++  ||||+              |+++|++++|+.     ...+.+...+..
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~~l~~l~~g~~pf~~~~~~~~~~~~~~~  219 (299)
T 2r3i_A          158 RTYTHEVVTLWYRAPEILLG--AKYYSTAV--DIWSL--------------GCIFAEMVTRRALFPGDSEIDQLFRIFRT  219 (299)
T ss_dssp             BCTTSCBCCCTTCCHHHHTT--CSSCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccCcccccccccCcHHhhc--cccCChHH--HHHHH--------------HHHHHHHHhCCCCCCCccHHHHHHHHHHH
Confidence            22344578999999999872  23467778  99999              999999776543     222333333332


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      .+.|..... .. ..... .....++.+.. -.+.... ...++...++|     ++||+.||++|||++|+++||||..
T Consensus       220 ~~~~~~~~~-~~-~~~~~-~~~~~~~~~~~-~~~~~~~-~~~~~~~~~li-----~~~L~~dP~~Rpt~~~~l~hp~~~~  289 (299)
T 2r3i_A          220 LGTPDEVVW-PG-VTSMP-DYKPSFPKWAR-QDFSKVV-PPLDEDGRSLL-----SQMLHYDPNKRISAKAALAHPFFQD  289 (299)
T ss_dssp             HCCCCTTTS-TT-GGGST-TCCTTSCCCCC-CCHHHHS-TTCCHHHHHHH-----HHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred             hCCCchhhh-hH-hhcCc-ccchhhhcccc-hhhHhhC-CCCCHHHHHHH-----HHhcCcCcccCCCHHHHhcChhhhc
Confidence            222221110 00 00000 00111121110 0011111 12336667888     9999999999999999999999986


Q ss_pred             CCC
Q psy7309         237 GSS  239 (454)
Q Consensus       237 ~~~  239 (454)
                      ...
T Consensus       290 ~~~  292 (299)
T 2r3i_A          290 VTK  292 (299)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543


No 122
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.94  E-value=5.8e-28  Score=243.05  Aligned_cols=162  Identities=25%  Similarity=0.406  Sum_probs=118.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..+..                          .
T Consensus       200 ~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~--------------------------~  253 (365)
T 2y7j_A          200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP--------------------------G  253 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT--------------------------T
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC--------------------------C
Confidence            36789999999999999999999999999999999999999999999875421                          2


Q ss_pred             CCCcCcccccceecccccccc---ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          82 TSHTGQVGTALYAAPELDSHG---VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~---~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                      ......+||+.|+|||++...   ....|+.++  ||||+              ||++|+|++|+.              
T Consensus       254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~--Di~sl--------------G~il~ell~g~~--------------  303 (365)
T 2y7j_A          254 EKLRELCGTPGYLAPEILKCSMDETHPGYGKEV--DLWAC--------------GVILFTLLAGSP--------------  303 (365)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             cccccCCCCCCccChhhccccccccCcCCCchh--hHHhH--------------HHHHHHHHHCCC--------------
Confidence            233456899999999998521   123577788  99999              999999776553              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                       |+...........+.... ..++..    .|.     ..++...++|     ++||+.||++|||++|+|+||||.
T Consensus       304 -pf~~~~~~~~~~~i~~~~-~~~~~~----~~~-----~~~~~~~~li-----~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          304 -PFWHRRQILMLRMIMEGQ-YQFSSP----EWD-----DRSSTVKDLI-----SRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             -SSCCSSHHHHHHHHHHTC-CCCCHH----HHS-----SSCHHHHHHH-----HHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             -CCCCCCHHHHHHHHHhCC-CCCCCc----ccc-----cCCHHHHHHH-----HHHcCCChhHCcCHHHHhcCcccC
Confidence             222222222222222111 111110    111     1235677888     999999999999999999999997


No 123
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.94  E-value=4e-28  Score=234.88  Aligned_cols=162  Identities=24%  Similarity=0.324  Sum_probs=109.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++.....                          
T Consensus       109 ~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--------------------------  162 (290)
T 3fme_A          109 DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD--------------------------  162 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccc--------------------------
Confidence            35789999999999999998 999999999999999999999999999986532                          


Q ss_pred             CCCCcCcccccceecccccccc-ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHG-VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~-~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      ........||+.|+|||++... .+..++.++  ||||+              |+++|++++++.               
T Consensus       163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------  211 (290)
T 3fme_A          163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKS--DIWSL--------------GITMIELAILRF---------------  211 (290)
T ss_dssp             -------CCCCCCSCHHHHSCCTTC--CCHHH--HHHHH--------------HHHHHHHHHTSC---------------
T ss_pred             cccccccCCCccccChhhcChhhcCcCCCcHH--HHHHH--------------HHHHHHHHHCCC---------------
Confidence            1223334799999999997311 255678888  99999              999999766543               


Q ss_pred             CCCC--chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         160 PSTG--SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       160 p~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                      |+..  .........+. ......+..            ..++...+++     .+||+.||++|||++|+++||||...
T Consensus       212 p~~~~~~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~li-----~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          212 PYDSWGTPFQQLKQVVE-EPSPQLPAD------------KFSAEFVDFT-----SQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             SSCCCSCHHHHHHHHHH-SCCCCCCTT------------TSCHHHHHHH-----HHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             CccccCchHHHHHHHhc-cCCCCcccc------------cCCHHHHHHH-----HHHhhcChhhCcCHHHHHhCcccccC
Confidence            2221  11111111111 222222211            1236667788     99999999999999999999999854


Q ss_pred             C
Q psy7309         238 S  238 (454)
Q Consensus       238 ~  238 (454)
                      .
T Consensus       274 ~  274 (290)
T 3fme_A          274 E  274 (290)
T ss_dssp             H
T ss_pred             c
Confidence            3


No 124
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.94  E-value=5.3e-28  Score=253.01  Aligned_cols=160  Identities=30%  Similarity=0.449  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC---CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE---DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~---~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++..   +.+||+|||+|.....                        
T Consensus       136 ~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~------------------------  191 (494)
T 3lij_A          136 VDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN------------------------  191 (494)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC------------------------
Confidence            3578999999999999999999999999999999764   4599999999975421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        .......+||+.|+|||++.    ..|+.++  ||||+              ||++|+|++|.+              
T Consensus       192 --~~~~~~~~gt~~y~aPE~l~----~~~~~~~--Diwsl--------------G~il~~ll~g~~--------------  235 (494)
T 3lij_A          192 --QKKMKERLGTAYYIAPEVLR----KKYDEKC--DVWSI--------------GVILFILLAGYP--------------  235 (494)
T ss_dssp             --TBCBCCCCSCTTTCCHHHHT----TCBCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --CccccccCCCcCeeCHHHHc----ccCCCch--hHHHH--------------HHHHHHHHhCCC--------------
Confidence              22344568999999999976    4588888  99999              999999776543              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       |+.+......+..+..... .++..    .|.     ..++.+.+||     ++||+.||.+|||++|+|+||||...
T Consensus       236 -pf~~~~~~~~~~~i~~~~~-~~~~~----~~~-----~~s~~~~~li-----~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          236 -PFGGQTDQEILRKVEKGKY-TFDSP----EWK-----NVSEGAKDLI-----KQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             -SSCCSSHHHHHHHHHHTCC-CCCSG----GGT-----TSCHHHHHHH-----HHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             -CCCCCCHHHHHHHHHhCCC-CCCch----hcc-----cCCHHHHHHH-----HHHCCCChhhCccHHHHhcCcccccC
Confidence             4444444444444443222 22211    122     2336778888     99999999999999999999999864


No 125
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.94  E-value=1.8e-27  Score=237.22  Aligned_cols=191  Identities=23%  Similarity=0.308  Sum_probs=122.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........               .......
T Consensus       112 ~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~---------------~~~~~~~  176 (353)
T 2b9h_A          112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN---------------SEPTGQQ  176 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccc---------------cCccccc
Confidence            4688999999999999999999999999999999999999999999998653211000               0000111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...++.++  ||||+              ||++|+|++|++.     ....+......
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~~l~~g~~pf~~~~~~~~~~~~~~~  238 (353)
T 2b9h_A          177 SGMVEFVATRWYRAPEVMLT--SAKYSRAM--DVWSC--------------GCILAELFLRRPIFPGRDYRHQLLLIFGI  238 (353)
T ss_dssp             ---CCCCCCGGGCCHHHHHS--CCCCCHHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cchhhccccccccCCeeecc--CCCccchh--hHHHH--------------HHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence            22345689999999998762  35678888  99999              9999997765541     12222222222


Q ss_pred             cCCCCCCchh--------hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhh
Q psy7309         157 ENGPSTGSNV--------QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQN  228 (454)
Q Consensus       157 ~~~p~~~~~~--------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~  228 (454)
                      .+.|......        ......+..     .+..    .+.... ...++...++|     ++||+.||++|||++|+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~-~~~~~~~~~li-----~~~L~~dP~~Rpt~~el  303 (353)
T 2b9h_A          239 IGTPHSDNDLRCIESPRAREYIKSLPM-----YPAA----PLEKMF-PRVNPKGIDLL-----QRMLVFDPAKRITAKEA  303 (353)
T ss_dssp             HCCCCSTTTTTTCCCHHHHHHHHTSCC-----CCCC----CHHHHS-TTSCHHHHHHH-----HHHSCSSGGGSCCHHHH
T ss_pred             hCCCchhccccccccchhhHHhhcccC-----CCCc----chhhhc-ccCCHHHHHHH-----HHhcCcCcccCCCHHHH
Confidence            2333221110        111111110     0100    011111 12236677888     99999999999999999


Q ss_pred             hcCcccccCCCC
Q psy7309         229 LCQPISLEGSSS  240 (454)
Q Consensus       229 l~hp~f~~~~~~  240 (454)
                      ++||||.....+
T Consensus       304 l~hp~~~~~~~~  315 (353)
T 2b9h_A          304 LEHPYLQTYHDP  315 (353)
T ss_dssp             HTSGGGTTTCCT
T ss_pred             hcCccccccCCc
Confidence            999999876543


No 126
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.94  E-value=4.2e-28  Score=233.52  Aligned_cols=162  Identities=24%  Similarity=0.373  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE---ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI---DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.|++.||+|||++||+||||||+|||+   +.++.+||+|||++.....                        
T Consensus       106 ~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~------------------------  161 (277)
T 3f3z_A          106 SDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP------------------------  161 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC------------------------
Confidence            4688999999999999999999999999999999   7788999999999875421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        ........||+.|+|||++.    ..++.++  ||||+              |+++|+|+++..              
T Consensus       162 --~~~~~~~~~t~~y~aPE~~~----~~~~~~~--Di~sl--------------G~~l~~l~~g~~--------------  205 (277)
T 3f3z_A          162 --GKMMRTKVGTPYYVSPQVLE----GLYGPEC--DEWSA--------------GVMMYVLLCGYP--------------  205 (277)
T ss_dssp             --TSCBCCCCSCTTTCCHHHHT----TCBCTTH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --ccchhccCCCCCccChHHhc----ccCCchh--hehhH--------------HHHHHHHHHCCC--------------
Confidence              22334567999999999986    3488888  99999              999999766543              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                       |+...........+... ...++..    .|     ...++...++|     .+||+.||++|||+.|+|+||||....
T Consensus       206 -p~~~~~~~~~~~~~~~~-~~~~~~~----~~-----~~~~~~~~~li-----~~~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          206 -PFSAPTDSEVMLKIREG-TFTFPEK----DW-----LNVSPQAESLI-----RRLLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             -SSCCSSHHHHHHHHHHC-CCCCCHH----HH-----TTSCHHHHHHH-----HHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             -CCCCCCHHHHHHHHHhC-CCCCCch----hh-----hcCCHHHHHHH-----HHHccCChhhCcCHHHHhcCHHHhccc
Confidence             33333333333333222 2222221    01     11236677888     999999999999999999999998644


Q ss_pred             C
Q psy7309         239 S  239 (454)
Q Consensus       239 ~  239 (454)
                      .
T Consensus       270 ~  270 (277)
T 3f3z_A          270 S  270 (277)
T ss_dssp             C
T ss_pred             c
Confidence            3


No 127
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.94  E-value=8.2e-28  Score=232.51  Aligned_cols=158  Identities=22%  Similarity=0.340  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....                           .
T Consensus       114 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~---------------------------~  166 (284)
T 2vgo_A          114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---------------------------S  166 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECS---------------------------S
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCc---------------------------c
Confidence            4678999999999999999999999999999999999999999999986432                           1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++|..               |+
T Consensus       167 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------pf  212 (284)
T 2vgo_A          167 LRRRTMCGTLDYLPPEMIE---GKTHDEKV--DLWCA--------------GVLCYEFLVGMP---------------PF  212 (284)
T ss_dssp             SCBCCCCSCGGGCCHHHHT---TCCBCTTH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             cccccccCCCCcCCHHHhc---cCCCCccc--chhhH--------------HHHHHHHHHCCC---------------CC
Confidence            1233467999999999988   56788888  99999              999999766543               23


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      ...........+. .....+|..             .++...++|     .+||+.||.+|||++|+++||||.....
T Consensus       213 ~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          213 DSPSHTETHRRIV-NVDLKFPPF-------------LSDGSKDLI-----SKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             CCSSHHHHHHHHH-TTCCCCCTT-------------SCHHHHHHH-----HHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             CCCCHhHHHHHHh-ccccCCCCc-------------CCHHHHHHH-----HHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            2222222222222 122233332             226667888     9999999999999999999999986554


No 128
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.94  E-value=7.4e-28  Score=239.33  Aligned_cols=185  Identities=22%  Similarity=0.283  Sum_probs=117.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE-------------------ccCCCeEEecccchhhhhhhcCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI-------------------DYEDHVKIGDFGLATNILQKHAGPLAR   62 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl-------------------~~~~~vKL~DFGla~~~~~~~~~~~~~   62 (454)
                      ..++.++.||+.||+|||++||+||||||+|||+                   +.++.+||+|||+++...         
T Consensus       123 ~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~---------  193 (355)
T 2eu9_A          123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH---------  193 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETT---------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccc---------
Confidence            4688999999999999999999999999999999                   567889999999987432         


Q ss_pred             cccCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC
Q psy7309          63 ELTGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD  142 (454)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~  142 (454)
                                         ......+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|
T Consensus       194 -------------------~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~g  235 (355)
T 2eu9_A          194 -------------------EHHTTIVATRHYRPPEVIL---ELGWAQPC--DVWSI--------------GCILFEYYRG  235 (355)
T ss_dssp             -------------------SCCCSSCSCGGGCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHS
T ss_pred             -------------------ccccCCcCCCcccCCeeee---cCCCCCcc--chHHH--------------HHHHHHHHhC
Confidence                               1234468999999999998   66788888  99999              9999997665


Q ss_pred             chh----hHHHHHHHhhhcCCCCCCchhhhhh-hhhccCCCCCCCccccc--------cccc--cccccccccchhHHHH
Q psy7309         143 RPK----TLEELKHNIRRENGPSTGSNVQKSL-QKFQKSPPSVYREWRSS--------FEWS--TVRNNIKSNFQHFLIL  207 (454)
Q Consensus       143 ~~~----~~~~l~~~i~~~~~p~~~~~~~~~~-~~~~~~~~~~~p~~~~~--------~~~~--~~~~~~~~~~~~~li~  207 (454)
                      ++.    ...+....+....++.+........ ..+.......++.....        ..+.  .......++.+.+|| 
T Consensus       236 ~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li-  314 (355)
T 2eu9_A          236 FTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLM-  314 (355)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHH-
T ss_pred             CCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHH-
Confidence            541    1111111222222222211110000 00000000000000000        0000  000011123455666 


Q ss_pred             HHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         208 IHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       208 ~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                          ++||+.||++|||++|+|+||||....
T Consensus       315 ----~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          315 ----RRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             ----HHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             ----HHHhcCChhhCcCHHHHhcChhhcCCC
Confidence                999999999999999999999998643


No 129
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.94  E-value=1.7e-27  Score=231.39  Aligned_cols=161  Identities=29%  Similarity=0.383  Sum_probs=123.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....                         ..
T Consensus       115 ~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~-------------------------~~  169 (294)
T 2rku_A          115 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-------------------------DG  169 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS-------------------------TT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceeccc-------------------------Cc
Confidence            46889999999999999999999999999999999999999999999875421                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++|+.               |+
T Consensus       170 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~g~~---------------p~  215 (294)
T 2rku_A          170 ERKKVLCGTPNYIAPEVLS---KKGHSFEV--DVWSI--------------GCIMYTLLVGKP---------------PF  215 (294)
T ss_dssp             CCBCCCCSCCSSCCHHHHT---TSCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             cccccccCCCCcCCcchhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            2234467999999999987   56678888  99999              999999776543               33


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  240 (454)
                      ...........+.. ....+|...             ++...+++     .+||+.||++|||++|+++||||.....+
T Consensus       216 ~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~~li-----~~~l~~~p~~Rps~~~ll~~~~~~~~~~~  275 (294)
T 2rku_A          216 ETSCLKETYLRIKK-NEYSIPKHI-------------NPVAASLI-----QKMLQTDPTARPTINELLNDEFFTSGYIP  275 (294)
T ss_dssp             CCSSHHHHHHHHHT-TCCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred             CCCCHHHHHHHHhh-ccCCCcccc-------------CHHHHHHH-----HHHcccChhhCcCHHHHhhChheecCCcC
Confidence            33333333333322 222333321             25667788     99999999999999999999999976554


No 130
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.94  E-value=1.3e-27  Score=237.36  Aligned_cols=161  Identities=29%  Similarity=0.387  Sum_probs=123.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....                         ..
T Consensus       141 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~-------------------------~~  195 (335)
T 2owb_A          141 PEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-------------------------DG  195 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS-------------------------TT
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceeccc-------------------------Cc
Confidence            46889999999999999999999999999999999999999999999975421                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++|+.               |+
T Consensus       196 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------pf  241 (335)
T 2owb_A          196 ERKKVLCGTPNYIAPEVLS---KKGHSFEV--DVWSI--------------GCIMYTLLVGKP---------------PF  241 (335)
T ss_dssp             CCBCCCCSCCSSCCHHHHH---TSCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             ccccccCCCccccCHHHhc---cCCCCchh--hHHHH--------------HHHHHHHHHCcC---------------CC
Confidence            2234567999999999987   56778888  99999              999999766543               23


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  240 (454)
                      ...........+... ...++...             ++...++|     ++||+.||++|||++|+++||||.....+
T Consensus       242 ~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~~li-----~~~l~~dp~~Rps~~ell~~~~~~~~~~~  301 (335)
T 2owb_A          242 ETSCLKETYLRIKKN-EYSIPKHI-------------NPVAASLI-----QKMLQTDPTARPTINELLNDEFFTSGYIP  301 (335)
T ss_dssp             CCSSHHHHHHHHHHT-CCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred             CCCCHHHHHHHHhcC-CCCCCccC-------------CHHHHHHH-----HHHccCChhHCcCHHHHhcCccccCCCcc
Confidence            332222222222211 22233321             25667788     99999999999999999999999977654


No 131
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.94  E-value=1.2e-27  Score=235.58  Aligned_cols=178  Identities=25%  Similarity=0.378  Sum_probs=120.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....                          .
T Consensus       120 ~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~--------------------------~  173 (326)
T 1blx_A          120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--------------------------Q  173 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCG--------------------------G
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccC--------------------------C
Confidence            46789999999999999999999999999999999999999999999875421                          1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~~  156 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+++++++.     ....+...+..
T Consensus       174 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~pf~~~~~~~~~~~i~~~  234 (326)
T 1blx_A          174 MALTSVVVTLWYRAPEVLL---QSSYATPV--DLWSV--------------GCIFAEMFRRKPLFRGSSDVDQLGKILDV  234 (326)
T ss_dssp             GGGCCCCCCCTTCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             CCccccccccceeCHHHHh---cCCCCcch--hHHHH--------------HHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            1233467899999999998   56788888  99999              9999997765541     12222222222


Q ss_pred             cCCCCCCchhhh-h--hhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309         157 ENGPSTGSNVQK-S--LQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI  233 (454)
Q Consensus       157 ~~~p~~~~~~~~-~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~  233 (454)
                      ...|........ .  ...+.......         +.... ...++...+||     .+||+.||.+|||+.|+++|||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~li-----~~~L~~dP~~Rpt~~e~l~hp~  299 (326)
T 1blx_A          235 IGLPGEEDWPRDVALPRQAFHSKSAQP---------IEKFV-TDIDELGKDLL-----LKCLTFNPAKRISAYSALSHPY  299 (326)
T ss_dssp             HCCCCGGGSCTTCSSCGGGSCCCCCCC---------GGGTC-CSCCHHHHHHH-----HHHSCSSTTTSCCHHHHHTSGG
T ss_pred             cCCCCcccCccccccchhhhcccCcch---------hhhcc-ccCCHHHHHHH-----HHHcCCCcccCCCHHHHhcCcc
Confidence            222211100000 0  00000000000         00011 12336667788     9999999999999999999999


Q ss_pred             cccCCC
Q psy7309         234 SLEGSS  239 (454)
Q Consensus       234 f~~~~~  239 (454)
                      |.....
T Consensus       300 ~~~~~~  305 (326)
T 1blx_A          300 FQDLER  305 (326)
T ss_dssp             GTTCCC
T ss_pred             ccccch
Confidence            986543


No 132
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.94  E-value=1.1e-27  Score=236.22  Aligned_cols=176  Identities=26%  Similarity=0.322  Sum_probs=117.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-------------------CCCeEEecccchhhhhhhcCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-------------------EDHVKIGDFGLATNILQKHAGPLAR   62 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-------------------~~~vKL~DFGla~~~~~~~~~~~~~   62 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.                   ++.+||+|||++....         
T Consensus       118 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~---------  188 (339)
T 1z57_A          118 DHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD---------  188 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETT---------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCc---------
Confidence            468899999999999999999999999999999987                   5679999999987432         


Q ss_pred             cccCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC
Q psy7309          63 ELTGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD  142 (454)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~  142 (454)
                                         ......+||+.|+|||++.   +..|+.++  ||||+              ||++||+++|
T Consensus       189 -------------------~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~g  230 (339)
T 1z57_A          189 -------------------EHHSTLVSTRHYRAPEVIL---ALGWSQPC--DVWSI--------------GCILIEYYLG  230 (339)
T ss_dssp             -------------------SCCCSSCSCGGGCCHHHHT---TSCCCTHH--HHHHH--------------HHHHHHHHHS
T ss_pred             -------------------cccccccCCccccChHHhh---CCCCCcch--hhHHH--------------HHHHHHHHhC
Confidence                               1233468999999999998   66788888  99999              9999997665


Q ss_pred             chh----hHHHHHHHhhhcCCCCCCchhhhhhh-hhccCCCCCCCccccccccccc-------------------ccccc
Q psy7309         143 RPK----TLEELKHNIRRENGPSTGSNVQKSLQ-KFQKSPPSVYREWRSSFEWSTV-------------------RNNIK  198 (454)
Q Consensus       143 ~~~----~~~~l~~~i~~~~~p~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~-------------------~~~~~  198 (454)
                      ...    ...+....+....++.+......... .+.....         ..|...                   .....
T Consensus       231 ~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (339)
T 1z57_A          231 FTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDR---------LDWDEHSSAGRYVSRACKPLKEFMLSQDVE  301 (339)
T ss_dssp             SCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTE---------ECCCTTSHHHHHHHHHCCCGGGGCSCCSHH
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcc---------ccccccccccchhhhcCcchhhhcccchhh
Confidence            431    11111112222222222111110000 0000000         111100                   00111


Q ss_pred             ccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         199 SNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       199 ~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      ++.+.+||     .+||+.||.+|||++|+++||||....
T Consensus       302 ~~~l~~li-----~~~L~~dP~~Rpt~~ell~hp~f~~~~  336 (339)
T 1z57_A          302 HERLFDLI-----QKMLEYDPAKRITLREALKHPFFDLLK  336 (339)
T ss_dssp             HHHHHHHH-----HHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred             HHHHHHHH-----HHHhCcCcccccCHHHHhcCHHHHHHh
Confidence            24455666     999999999999999999999998543


No 133
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94  E-value=7.6e-28  Score=241.23  Aligned_cols=164  Identities=24%  Similarity=0.319  Sum_probs=115.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....                        ..
T Consensus       159 ~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~------------------------~~  214 (355)
T 1vzo_A          159 HEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD------------------------ET  214 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG------------------------GG
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccC------------------------CC
Confidence            367889999999999999999999999999999999999999999999754221                        11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++..+ ...++.++  ||||+              ||++|||++|+.+..           ...
T Consensus       215 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~--Dvwsl--------------G~il~ell~g~~pf~-----------~~~  266 (355)
T 1vzo_A          215 ERAYDFCGTIEYMAPDIVRGG-DSGHDKAV--DWWSL--------------GVLMYELLTGASPFT-----------VDG  266 (355)
T ss_dssp             GGGCGGGSCCTTCCHHHHTTC-C---CTHH--HHHHH--------------HHHHHHHHHSSCTTS-----------CTT
T ss_pred             CcccCcccCcCccChhhhcCC-CCCCCchh--hHHHH--------------HHHHHHHHHCCCCCc-----------cCC
Confidence            123346899999999998721 23467777  99999              999999776553210           000


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-----ChhhhhcCccccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-----SSEQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-----ta~e~l~hp~f~~  236 (454)
                      ...........+. .....++...             ++...++|     .+||+.||++||     |++|+++||||..
T Consensus       267 ~~~~~~~~~~~~~-~~~~~~~~~~-------------~~~~~~li-----~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          267 EKNSQAEISRRIL-KSEPPYPQEM-------------SALAKDLI-----QRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             SCCCHHHHHHHHH-HCCCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             ccchHHHHHHHHh-ccCCCCCccc-------------CHHHHHHH-----HHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence            0011111122222 1222233322             25667788     999999999999     9999999999985


No 134
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.94  E-value=7.1e-28  Score=236.40  Aligned_cols=173  Identities=25%  Similarity=0.313  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC---eEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH---VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~---vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.   +||+|||++..........                  .
T Consensus       111 ~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~------------------~  172 (316)
T 2ac3_A          111 LEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS------------------P  172 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc------------------c
Confidence            367899999999999999999999999999999998776   9999999987543210000                  0


Q ss_pred             cCCCCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhh
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRR  156 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~  156 (454)
                      .........+||+.|+|||++...  ....|+.++  ||||+              ||++|||++|+++           
T Consensus       173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~--Diwsl--------------G~il~~l~~g~~p-----------  225 (316)
T 2ac3_A          173 ISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC--DLWSL--------------GVILYILLSGYPP-----------  225 (316)
T ss_dssp             ---------CCSGGGCCHHHHHHTSHHHHHHTTTH--HHHHH--------------HHHHHHHHHSSCS-----------
T ss_pred             ccccccccccCCcCccChHHhhcccccccCCCccc--ccHhH--------------HHHHHHHHHCCCC-----------
Confidence            011223346799999999998621  125678888  99999              9999997765532           


Q ss_pred             cCCCCCCch---------------hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC
Q psy7309         157 ENGPSTGSN---------------VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK  221 (454)
Q Consensus       157 ~~~p~~~~~---------------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~  221 (454)
                          +.+..               .......+. .....+|..    .|     ...++.+.+||     ++||+.||++
T Consensus       226 ----f~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~----~~-----~~~~~~~~~li-----~~~L~~dP~~  286 (316)
T 2ac3_A          226 ----FVGRCGSDCGWDRGEACPACQNMLFESIQ-EGKYEFPDK----DW-----AHISCAAKDLI-----SKLLVRDAKQ  286 (316)
T ss_dssp             ----CCCCCCSCSCC----CCHHHHHHHHHHHH-HCCCCCCHH----HH-----TTSCHHHHHHH-----HHHSCSSTTT
T ss_pred             ----CcccccccccccccccchhHHHHHHHHHh-ccCcccCch----hc-----ccCCHHHHHHH-----HHHhhCChhh
Confidence                11110               011122222 122222221    01     11236677888     9999999999


Q ss_pred             CCChhhhhcCcccccCC
Q psy7309         222 RPSSEQNLCQPISLEGS  238 (454)
Q Consensus       222 Rpta~e~l~hp~f~~~~  238 (454)
                      |||++|+|+||||....
T Consensus       287 Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          287 RLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             SCCHHHHHHSTTCC---
T ss_pred             CCCHHHHhcChhhcCCC
Confidence            99999999999998543


No 135
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.94  E-value=1.7e-27  Score=235.81  Aligned_cols=184  Identities=27%  Similarity=0.333  Sum_probs=116.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....                         ..
T Consensus       124 ~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-------------------------~~  178 (331)
T 4aaa_A          124 QVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA-------------------------PG  178 (331)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecC-------------------------Cc
Confidence            46889999999999999999999999999999999999999999999975532                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch-----hhHHHHHHHhhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP-----KTLEELKHNIRR  156 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~-----~~~~~l~~~i~~  156 (454)
                      ......+||+.|+|||++..  ...++.++  ||||+              ||++|+|++|++     .....+...+..
T Consensus       179 ~~~~~~~~t~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~~l~~g~~pf~~~~~~~~~~~~~~~  240 (331)
T 4aaa_A          179 EVYDDEVATRWYRAPELLVG--DVKYGKAV--DVWAI--------------GCLVTEMFMGEPLFPGDSDIDQLYHIMMC  240 (331)
T ss_dssp             -----CCCCCTTCCHHHHTT--CTTCCTHH--HHHHH--------------HHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccCCCcCCccccCcccccC--CCCcchHH--HHHHH--------------HHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence            22344678999999999871  24678888  99999              999999776554     122222222221


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      .+.+.+.  ....+..........++.......+.... ...++...+||     .+||+.||++|||++|+|+||||+.
T Consensus       241 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li-----~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          241 LGNLIPR--HQELFNKNPVFAGVRLPEIKEREPLERRY-PKLSEVVIDLA-----KKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             HCSCCHH--HHHHHHHCGGGTTCCCCCCSSCCCHHHHS-TTSCHHHHHHH-----HHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             hCCCChh--hhhHhhhccccccccCccccccchhhhcc-cchhHHHHHHH-----HHHhccCcccCCCHHHHhcCchhcc
Confidence            1111110  01111110001111112111101111111 12236667777     9999999999999999999999985


No 136
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.94  E-value=1.4e-27  Score=230.04  Aligned_cols=154  Identities=24%  Similarity=0.287  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-------------------CCeEEecccchhhhhhhcCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-------------------DHVKIGDFGLATNILQKHAGPLAR   62 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-------------------~~vKL~DFGla~~~~~~~~~~~~~   62 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.+                   ..+||+|||++.....        
T Consensus       115 ~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--------  186 (289)
T 1x8b_A          115 AELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--------  186 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTC--------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCC--------
Confidence            4688999999999999999999999999999999844                   4799999999875421        


Q ss_pred             cccCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCC
Q psy7309          63 ELTGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKD  142 (454)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~  142 (454)
                                           .....||+.|+|||++..  ...++.++  ||||+              |+++|+++++
T Consensus       187 ---------------------~~~~~gt~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~~l~~~  227 (289)
T 1x8b_A          187 ---------------------PQVEEGDSRFLANEVLQE--NYTHLPKA--DIFAL--------------ALTVVCAAGA  227 (289)
T ss_dssp             ---------------------SCCCCCCGGGCCHHHHTT--CCTTHHHH--HHHHH--------------HHHHHHHTTC
T ss_pred             ---------------------ccccCCCccccChhHhcC--CCCCCchh--hHHHH--------------HHHHHHHhcC
Confidence                                 122459999999999872  23566677  99999              9999998776


Q ss_pred             chhhHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCC
Q psy7309         143 RPKTLEELKHNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKR  222 (454)
Q Consensus       143 ~~~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~R  222 (454)
                      .+.               +....   ....+.......+|..             .++...++|     .+||+.||++|
T Consensus       228 ~~~---------------~~~~~---~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~dp~~R  271 (289)
T 1x8b_A          228 EPL---------------PRNGD---QWHEIRQGRLPRIPQV-------------LSQEFTELL-----KVMIHPDPERR  271 (289)
T ss_dssp             CCC---------------CSSSH---HHHHHHTTCCCCCSSC-------------CCHHHHHHH-----HHHTCSSGGGS
T ss_pred             CCC---------------Ccchh---HHHHHHcCCCCCCCcc-------------cCHHHHHHH-----HHHhCCCcccC
Confidence            541               11111   1111111222233332             236677888     99999999999


Q ss_pred             CChhhhhcCcccccCC
Q psy7309         223 PSSEQNLCQPISLEGS  238 (454)
Q Consensus       223 pta~e~l~hp~f~~~~  238 (454)
                      ||+.|+++||||....
T Consensus       272 ps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          272 PSAMALVKHSVLLSAS  287 (289)
T ss_dssp             CCHHHHHTCTTC----
T ss_pred             CCHHHHhhChHhhhhc
Confidence            9999999999998643


No 137
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.94  E-value=1e-27  Score=251.39  Aligned_cols=162  Identities=30%  Similarity=0.444  Sum_probs=124.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.+++||+.||+|||++||+||||||+|||++.++   .+||+|||+|.....                        
T Consensus       146 ~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~------------------------  201 (504)
T 3q5i_A          146 CDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK------------------------  201 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCT------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCC------------------------
Confidence            36889999999999999999999999999999999876   699999999975421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        .......+||+.|+|||++.    ..|+.++  ||||+              ||++|+|++|.+              
T Consensus       202 --~~~~~~~~gt~~y~aPE~~~----~~~~~~~--Diwsl--------------G~il~~ll~g~~--------------  245 (504)
T 3q5i_A          202 --DYKLRDRLGTAYYIAPEVLK----KKYNEKC--DVWSC--------------GVIMYILLCGYP--------------  245 (504)
T ss_dssp             --TSCBCCCCSCTTTCCHHHHT----TCBCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --CCccccccCCcCCCCHHHhc----cCCCchH--HHHHH--------------HHHHHHHHhCCC--------------
Confidence              22344568999999999976    4588888  99999              999999766543              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                       |+.+.+....+..+..... .++..    .|.     ..++.+.+||     ++||+.||.+|||++|+|+||||....
T Consensus       246 -pf~~~~~~~~~~~i~~~~~-~~~~~----~~~-----~~s~~~~~li-----~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          246 -PFGGQNDQDIIKKVEKGKY-YFDFN----DWK-----NISDEAKELI-----KLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             -SSCCSSHHHHHHHHHHCCC-CCCHH----HHT-----TSCHHHHHHH-----HHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             -CCCCCCHHHHHHHHHcCCC-CCCcc----ccC-----CCCHHHHHHH-----HHHcCCChhHCCCHHHHhcCHhhhhch
Confidence             4555554555555443322 22211    121     2336778888     999999999999999999999998654


Q ss_pred             C
Q psy7309         239 S  239 (454)
Q Consensus       239 ~  239 (454)
                      .
T Consensus       310 ~  310 (504)
T 3q5i_A          310 N  310 (504)
T ss_dssp             C
T ss_pred             h
Confidence            3


No 138
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.93  E-value=3.2e-27  Score=229.02  Aligned_cols=156  Identities=26%  Similarity=0.358  Sum_probs=114.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEc-cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFID-YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||.|||++|  |+||||||+|||++ .++.+||+|||++....                         
T Consensus       129 ~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~-------------------------  183 (290)
T 1t4h_A          129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR-------------------------  183 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc-------------------------
Confidence            467899999999999999999  99999999999998 78899999999996432                         


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        ........||+.|+|||++.    ..++.++  ||||+              |+++|+|++++.              
T Consensus       184 --~~~~~~~~~t~~y~aPE~~~----~~~~~~~--Di~sl--------------G~~l~~l~~g~~--------------  227 (290)
T 1t4h_A          184 --ASFAKAVIGTPEFMAPEMYE----EKYDESV--DVYAF--------------GMCMLEMATSEY--------------  227 (290)
T ss_dssp             --TTSBEESCSSCCCCCGGGGG----TCCCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --ccccccccCCcCcCCHHHHh----ccCCCcc--hHHHH--------------HHHHHHHHhCCC--------------
Confidence              12233457999999999876    4588888  99999              999999776543              


Q ss_pred             CCCCCc-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         159 GPSTGS-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       159 ~p~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                       |+... ........+.....   +...   .      ...++...++|     .+||+.||.+|||++|+++||||++
T Consensus       228 -pf~~~~~~~~~~~~~~~~~~---~~~~---~------~~~~~~l~~li-----~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          228 -PYSECQNAAQIYRRVTSGVK---PASF---D------KVAIPEVKEII-----EGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             -TTTTCSSHHHHHHHHTTTCC---CGGG---G------GCCCHHHHHHH-----HHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             -CCCCcCcHHHHHHHHhccCC---cccc---C------CCCCHHHHHHH-----HHHccCChhhCCCHHHHhhCccccc
Confidence             22221 11122222221111   1110   0      11235677788     9999999999999999999999985


No 139
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.93  E-value=1.6e-27  Score=229.22  Aligned_cols=159  Identities=25%  Similarity=0.325  Sum_probs=111.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....                          .
T Consensus       111 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~--------------------------~  164 (276)
T 2h6d_A          111 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--------------------------G  164 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCC--------------------------C
Confidence            36789999999999999999999999999999999999999999999875421                          1


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..+ +.++  ||||+              |++++++++++.               |
T Consensus       165 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~~--Di~sl--------------G~~l~~l~~g~~---------------p  210 (276)
T 2h6d_A          165 EFLRTSCGSPNYAAPEVIS---GRLYAGPEV--DIWSC--------------GVILYALLCGTL---------------P  210 (276)
T ss_dssp             ------------CCTGGGT---TSCCCHHHH--HHHHH--------------HHHHHHHHHSSC---------------S
T ss_pred             cceecccCCccccCHHHHc---CCCCCCccc--hHHHH--------------HHHHHHHHhCCC---------------C
Confidence            1233457899999999987   3433 5677  99999              999999766543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +...........+... ...+|...             +....++|     .+||+.||.+|||++|+++||||.....
T Consensus       211 ~~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~l~~li-----~~~l~~~p~~Rps~~~~l~h~~~~~~~~  270 (276)
T 2h6d_A          211 FDDEHVPTLFKKIRGG-VFYIPEYL-------------NRSVATLL-----MHMLQVDPLKRATIKDIREHEWFKQDLP  270 (276)
T ss_dssp             SCCSSHHHHHHHHHHC-CCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred             CCCCcHHHHHHHhhcC-cccCchhc-------------CHHHHHHH-----HHHccCChhhCCCHHHHHhChhhccCch
Confidence            3333333333333222 22233321             25667788     9999999999999999999999986543


No 140
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.93  E-value=2.5e-27  Score=230.86  Aligned_cols=165  Identities=27%  Similarity=0.384  Sum_probs=116.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......                         .
T Consensus       117 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------------------------~  171 (302)
T 2j7t_A          117 PQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-------------------------L  171 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-------------------------H
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc-------------------------c
Confidence            467899999999999999999999999999999999999999999998754321                         0


Q ss_pred             CCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      .......||+.|+|||++...  ....++.++  ||||+              |+++|+|+++..               
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------  220 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA--DIWSL--------------GITLIEMAQIEP---------------  220 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHH--HHHHH--------------HHHHHHHHHSSC---------------
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhh--hHHHH--------------HHHHHHHhcCCC---------------
Confidence            112345799999999998411  145677777  99999              999999776543               


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      |+...+.......+...........           ...+....++|     .+||+.||++|||++|+++||||....
T Consensus       221 p~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          221 PHHELNPMRVLLKIAKSDPPTLLTP-----------SKWSVEFRDFL-----KIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCCCSSG-----------GGSCHHHHHHH-----HHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             CCccCCHHHHHHHHhccCCcccCCc-----------cccCHHHHHHH-----HHHcccChhhCCCHHHHhcChHHhhhc
Confidence            2222222222222222222211111           11225667788     999999999999999999999998543


No 141
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.93  E-value=3.2e-27  Score=226.90  Aligned_cols=164  Identities=23%  Similarity=0.350  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++......                       ...
T Consensus       105 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-----------------------~~~  161 (276)
T 2yex_A          105 PDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN-----------------------NRE  161 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET-----------------------TEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCC-----------------------cch
Confidence            368899999999999999999999999999999999999999999998754211                       011


Q ss_pred             CCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..+ +.++  ||||+              |+++|++++|..               |
T Consensus       162 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p  207 (276)
T 2yex_A          162 RLLNKMCGTLPYVAPELLK---RREFHAEPV--DVWSC--------------GIVLTAMLAGEL---------------P  207 (276)
T ss_dssp             CCBCCCCSCGGGCCGGGGT---CSSBCHHHH--HHHHH--------------HHHHHHHHHSSC---------------C
T ss_pred             hcccCCccccCccChHHHh---cCCCCCCcc--hHHHH--------------HHHHHHHHhCCC---------------C
Confidence            2234568999999999987   3343 6677  99999              999999766543               2


Q ss_pred             CCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         161 STGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       161 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      +...... .....+... ....+.      |     ...++...++|     .+||+.||++|||++|+++||||.....
T Consensus       208 ~~~~~~~~~~~~~~~~~-~~~~~~------~-----~~~~~~~~~li-----~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          208 WDQPSDSCQEYSDWKEK-KTYLNP------W-----KKIDSAPLALL-----HKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             CSCSCTTSHHHHHHHTT-CTTSTT------G-----GGSCHHHHHHH-----HHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             CCCCchHHHHHHHhhhc-ccccCc------h-----hhcCHHHHHHH-----HHHCCCCchhCCCHHHHhcCccccChhh
Confidence            2221110 111111111 111111      1     11236667788     9999999999999999999999986544


No 142
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C*
Probab=99.93  E-value=1e-26  Score=224.76  Aligned_cols=120  Identities=14%  Similarity=0.117  Sum_probs=108.8

Q ss_pred             HHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeCCCCCHHHHHHHHHc--CCC-CceeeEeecCccccC
Q psy7309         322 LRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLPHDLRIPFARYLAQN--GSI-VSMKRYCIDRVFRER  398 (454)
Q Consensus       322 l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~--~~~-~~~k~~y~g~vfR~~  398 (454)
                      ++++|++|||.+|.||+||+.+++..   +  +|.|++|+.++||||+|+|+|   +.+  ... .|+|+||+|+|||++
T Consensus        12 ~~~~~~~~Gy~eI~tP~le~~~l~~~---d--~f~d~~g~~l~LRpd~T~~~a---~~~~~~~~~~p~R~~y~g~vfR~e   83 (275)
T 1usy_A           12 FYSKATKKGFSPFFVPALEKAEEPAG---N--FFLDRKGNLFSIREDFTKTVL---NHRKRYSPDSQIKVWYADFVYRYS   83 (275)
T ss_dssp             HHHHHHHTTCEECCCCSEEECSSCCS---S--CEEETTSCEEEECCCHHHHHH---HHHTTCTTCCCEEEECCEEEEEEE
T ss_pred             HHHHHHHCCCEEecCccccchhhhcc---c--ccCCCCCCEEEeCCcChHHHH---HHHhhcCCCCceEEEEeceEEecC
Confidence            44999999999999999999999975   2  678999999999999999999   333  214 799999999999998


Q ss_pred             CCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEEcCcccc
Q psy7309         399 RVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFAPHPRVL  453 (454)
Q Consensus       399 ~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~~~  453 (454)
                      +++.   |||+|+|+||+|.+ +..+|+|+|.++.++|+.+|+++++|+|||+++
T Consensus        84 ~~~~---Ref~Q~g~ei~g~~-~~~~DaEvi~l~~~~l~~lgl~~~~i~l~~~~~  134 (275)
T 1usy_A           84 GSDL---VAEYQLGLEKVPRN-SLDDSLEVLEIIVESASEFFEGPVIVEIGHTGV  134 (275)
T ss_dssp             TTEE---EEEEEEEEEEESCC-SHHHHHHHHHHHHHHHHHHCCSCEEEEEEETTH
T ss_pred             CCCC---CeeeEeCEEEecCC-CchhHHHHHHHHHHHHHHcCCCCeEEEeCCHHH
Confidence            8765   99999999999998 899999999999999999999999999999974


No 143
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.93  E-value=9.2e-28  Score=245.67  Aligned_cols=152  Identities=18%  Similarity=0.173  Sum_probs=114.9

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      .++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....                            
T Consensus       212 ~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~----------------------------  263 (413)
T 3dzo_A          212 ARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----------------------------  263 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTE----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCC----------------------------
Confidence            5678889999999999999999999999999999999999999999875421                            


Q ss_pred             CCcCcccccceecccccccc-------ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhh
Q psy7309          83 SHTGQVGTALYAAPELDSHG-------VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIR  155 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~-------~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~  155 (454)
                      .....+| +.|+|||++...       ....|+.++  ||||+              ||++|||++|+.           
T Consensus       264 ~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~--DvwSl--------------Gvil~elltg~~-----------  315 (413)
T 3dzo_A          264 SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAF--DTWTL--------------GLAIYWIWCADL-----------  315 (413)
T ss_dssp             EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHH--HHHHH--------------HHHHHHHHHSSC-----------
T ss_pred             ccccCCC-CceeCchhhhccccccccccCcCCCchh--hHHHH--------------HHHHHHHHHCCC-----------
Confidence            1344577 999999998311       255688888  99999              999999876543           


Q ss_pred             hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                          |+...........+.       +..           ...++...+||     .+||+.||++|||+.|+++||||.
T Consensus       316 ----Pf~~~~~~~~~~~~~-------~~~-----------~~~~~~~~~li-----~~~l~~dP~~Rpt~~~~l~~~~~~  368 (413)
T 3dzo_A          316 ----PNTDDAALGGSEWIF-------RSC-----------KNIPQPVRALL-----EGFLRYPKEDRLLPLQAMETPEYE  368 (413)
T ss_dssp             ----CCCTTGGGSCSGGGG-------SSC-----------CCCCHHHHHHH-----HHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             ----CCCCcchhhhHHHHH-------hhc-----------ccCCHHHHHHH-----HHHccCChhhCcCHHHHHhCHHHH
Confidence                333322211111111       100           11226677888     999999999999999999999998


Q ss_pred             cC
Q psy7309         236 EG  237 (454)
Q Consensus       236 ~~  237 (454)
                      ..
T Consensus       369 ~~  370 (413)
T 3dzo_A          369 QL  370 (413)
T ss_dssp             HH
T ss_pred             HH
Confidence            43


No 144
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.93  E-value=3.1e-27  Score=243.21  Aligned_cols=165  Identities=28%  Similarity=0.338  Sum_probs=108.6

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-----CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-----DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-----~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      +++.+++||+.||+|||++||+||||||+|||++.+     ..+||+|||+|+......                     
T Consensus       119 ~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~---------------------  177 (432)
T 3p23_A          119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR---------------------  177 (432)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC---------------------
Confidence            568899999999999999999999999999999532     258899999998553210                     


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhh
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRR  156 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~  156 (454)
                       .........+||+.|+|||++.......++.++  ||||+              ||++||+++ |..            
T Consensus       178 -~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~--DiwSl--------------G~il~ellt~g~~------------  228 (432)
T 3p23_A          178 -HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTV--DIFSA--------------GCVFYYVISEGSH------------  228 (432)
T ss_dssp             ---------CCSCTTSCCGGGTSCC---CCCTHH--HHHHH--------------HHHHHHHHTTSCB------------
T ss_pred             -cceeeccccCCCcCccChhhhhcccccCCCcHH--HHHHH--------------HHHHHHHHcCCCC------------
Confidence             111234456899999999999743345666777  99999              999999776 443            


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                         |+....... ................          ...+..+.+||     .+||+.||++|||++|+++||||..
T Consensus       229 ---pf~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~li-----~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          229 ---PFGKSLQRQ-ANILLGACSLDCLHPE----------KHEDVIARELI-----EKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             ---TTBSTTTHH-HHHHTTCCCCTTSCTT----------CHHHHHHHHHH-----HHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             ---CcchhhHHH-HHHHhccCCccccCcc----------ccccHHHHHHH-----HHHHhCCHhhCCCHHHHHhCccccC
Confidence               221111111 1111111111110000          01124456677     9999999999999999999999974


No 145
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.93  E-value=2.9e-27  Score=231.12  Aligned_cols=160  Identities=24%  Similarity=0.378  Sum_probs=118.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE---ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI---DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.|++.||+|||++||+||||||+||++   +.++.+||+|||++....                         
T Consensus       106 ~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~-------------------------  160 (304)
T 2jam_A          106 KDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-------------------------  160 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC-------------------------
Confidence            4678999999999999999999999999999999   778899999999986321                         


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        ........||+.|+|||++.   +..|+.++  ||||+              |+++|+|++|..              
T Consensus       161 --~~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~--------------  205 (304)
T 2jam_A          161 --NGIMSTACGTPGYVAPEVLA---QKPYSKAV--DCWSI--------------GVITYILLCGYP--------------  205 (304)
T ss_dssp             --CBTTHHHHSCCCBCCTTTBS---SCSCCHHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --CCccccccCCCCccChHHhc---cCCCCchh--hHHHH--------------HHHHHHHHHCCC--------------
Confidence              11233457999999999998   66788888  99999              999999776553              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       |+...........+.... ..++...    |     ...++...++|     .+||+.||++|||++|+++||||...
T Consensus       206 -pf~~~~~~~~~~~i~~~~-~~~~~~~----~-----~~~~~~~~~li-----~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          206 -PFYEETESKLFEKIKEGY-YEFESPF----W-----DDISESAKDFI-----CHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             -TTTTSCHHHHHHHHHHCC-CCCCTTT----T-----TTSCHHHHHHH-----HHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             -CCCCCCHHHHHHHHHcCC-CCCCccc----c-----ccCCHHHHHHH-----HHHcCCChhHCcCHHHHhcCccccCC
Confidence             222222222222222221 1111110    0     11236677888     99999999999999999999999854


No 146
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.93  E-value=3.8e-27  Score=230.94  Aligned_cols=163  Identities=26%  Similarity=0.449  Sum_probs=120.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.....                         ..
T Consensus       125 ~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~-------------------------~~  179 (314)
T 3com_A          125 DEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD-------------------------TM  179 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT-------------------------TB
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh-------------------------hc
Confidence            46789999999999999999999999999999999999999999999975421                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++|..               |+
T Consensus       180 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p~  225 (314)
T 3com_A          180 AKRNTVIGTPFWMAPEVIQ---EIGYNCVA--DIWSL--------------GITAIEMAEGKP---------------PY  225 (314)
T ss_dssp             SCBCCCCSCGGGCCHHHHS---SSCBCTTH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             cccCccCCCCCccChhhcC---CCCCCccc--cHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            2234467999999999987   56788888  99999              999999776553               22


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      ...........+.......+...           ...++...++|     .+||..||.+|||+.|+++||||.....
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~li-----~~~l~~dp~~Rpt~~~ll~~~~~~~~~~  287 (314)
T 3com_A          226 ADIHPMRAIFMIPTNPPPTFRKP-----------ELWSDNFTDFV-----KQCLVKSPEQRATATQLLQHPFVRSAKG  287 (314)
T ss_dssp             TTSCHHHHHHHHHHSCCCCCSSG-----------GGSCHHHHHHH-----HHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred             CCCChHHHHHHHhcCCCcccCCc-----------ccCCHHHHHHH-----HHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence            22222111222221222221111           11235667788     9999999999999999999999986543


No 147
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.93  E-value=3.8e-27  Score=236.35  Aligned_cols=186  Identities=18%  Similarity=0.163  Sum_probs=117.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEcc------CCCeEEecccchhhhhhhcCCCccccccCccCCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDY------EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDS   74 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~   74 (454)
                      ..++.++.||+.||+|||++ ||+||||||+|||++.      .+.+||+|||+|.....                    
T Consensus       131 ~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~--------------------  190 (373)
T 1q8y_A          131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--------------------  190 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC--------------------
Confidence            36889999999999999998 9999999999999954      33799999999975421                    


Q ss_pred             CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh--------
Q psy7309          75 TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT--------  146 (454)
Q Consensus        75 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~--------  146 (454)
                              .....+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|+.+.        
T Consensus       191 --------~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~g~~pf~~~~~~~~  243 (373)
T 1q8y_A          191 --------HYTNSIQTREYRSPEVLL---GAPWGCGA--DIWST--------------ACLIFELITGDFLFEPDEGHSY  243 (373)
T ss_dssp             --------CCCSCCSCGGGCCHHHHH---TCCCCTHH--HHHHH--------------HHHHHHHHHSSCCC--------
T ss_pred             --------CCCCCCCCccccCcHHHh---CCCCCchH--hHHHH--------------HHHHHHHHhCCCCCCCCccccc
Confidence                    233458899999999998   66788888  99999              88888877655421        


Q ss_pred             ---HHHHHHHhhhcCCCCCCchhhh--hhhhhc-cCCCCCCCccccccccccc------cccccccchhHHHHHHHHhhh
Q psy7309         147 ---LEELKHNIRRENGPSTGSNVQK--SLQKFQ-KSPPSVYREWRSSFEWSTV------RNNIKSNFQHFLILIHQQKWC  214 (454)
Q Consensus       147 ---~~~l~~~i~~~~~p~~~~~~~~--~~~~~~-~~~~~~~p~~~~~~~~~~~------~~~~~~~~~~~li~~~~~~~~  214 (454)
                         ...+...+...+ +.+......  ....+. ...................      .+...++.+.+||     .+|
T Consensus       244 ~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-----~~~  317 (373)
T 1q8y_A          244 TKDDDHIAQIIELLG-ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFL-----SPM  317 (373)
T ss_dssp             -CHHHHHHHHHHHHC-SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHH-----GGG
T ss_pred             CChHHHHHHHHHhcC-CCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHH-----HHH
Confidence               122222222222 211110000  000000 0000000000000000000      0011224556677     999


Q ss_pred             cCCCCCCCCChhhhhcCcccccCCCC
Q psy7309         215 LNHDPSKRPSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       215 L~~dP~~Rpta~e~l~hp~f~~~~~~  240 (454)
                      |+.||++|||++|+|+||||......
T Consensus       318 L~~dP~~Rpt~~ell~hp~f~~~~~~  343 (373)
T 1q8y_A          318 LQLDPRKRADAGGLVNHPWLKDTLGM  343 (373)
T ss_dssp             GCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred             hccCccccCCHHHHhhChhhhcccCc
Confidence            99999999999999999999976543


No 148
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.93  E-value=2.6e-27  Score=231.13  Aligned_cols=160  Identities=29%  Similarity=0.474  Sum_probs=121.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....                         ..
T Consensus       119 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~-------------------------~~  173 (303)
T 3a7i_A          119 TQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD-------------------------TQ  173 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT-------------------------TB
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCc-------------------------cc
Confidence            46789999999999999999999999999999999999999999999975431                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++|.+               |+
T Consensus       174 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p~  219 (303)
T 3a7i_A          174 IKRNTFVGTPFWMAPEVIK---QSAYDSKA--DIWSL--------------GITAIELARGEP---------------PH  219 (303)
T ss_dssp             CCBCCCCSCGGGCCHHHHT---TCCBCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             cccCccCCCcCccCHHHHh---cCCCCchh--hhHHH--------------HHHHHHHccCCC---------------CC
Confidence            2234568999999999997   66788888  99999              999999776553               22


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      ...........+.......++..             .+....++|     .+||+.||.+|||++|+++||||....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~~ll~~~~~~~~~  278 (303)
T 3a7i_A          220 SELHPMKVLFLIPKNNPPTLEGN-------------YSKPLKEFV-----EACLNKEPSFRPTAKELLKHKFILRNA  278 (303)
T ss_dssp             TTSCHHHHHHHHHHSCCCCCCSS-------------CCHHHHHHH-----HHHCCSSGGGSCCHHHHTTCHHHHHHC
T ss_pred             CCcCHHHHHHHhhcCCCCCCccc-------------cCHHHHHHH-----HHHcCCChhhCcCHHHHhhChhhhcCC
Confidence            22222222222222222222222             225667788     999999999999999999999998543


No 149
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.93  E-value=4.7e-27  Score=228.43  Aligned_cols=165  Identities=24%  Similarity=0.379  Sum_probs=119.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....                          .
T Consensus       124 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~--------------------------~  177 (298)
T 1phk_A          124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--------------------------G  177 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT--------------------------T
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCC--------------------------C
Confidence            46889999999999999999999999999999999999999999999875421                          1


Q ss_pred             CCCcCcccccceecccccccc---ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          82 TSHTGQVGTALYAAPELDSHG---VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~---~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                      .......||+.|+|||++...   ....++.++  ||||+              |+++|+|++++.              
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~--Di~sl--------------G~~l~~l~~g~~--------------  227 (298)
T 1phk_A          178 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV--DMWST--------------GVIMYTLLAGSP--------------  227 (298)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             cccccccCCccccCHHHhccccccccccCCccc--ccHhH--------------HHHHHHHHHCCC--------------
Confidence            233456799999999997511   134577778  99999              999999776543              


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                       |+...........+.... ..++..    .|     ...++...++|     .+||+.||.+|||++|+++||||....
T Consensus       228 -p~~~~~~~~~~~~~~~~~-~~~~~~----~~-----~~~~~~l~~li-----~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          228 -PFWHRKQMLMLRMIMSGN-YQFGSP----EW-----DDYSDTVKDLV-----SRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             -SSCCSSHHHHHHHHHHTC-CCCCTT----TG-----GGSCHHHHHHH-----HHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             -CCcCccHHHHHHHHhcCC-cccCcc----cc-----cccCHHHHHHH-----HHHccCCcccCCCHHHHHhChHhhhcc
Confidence             222222222222222111 111111    01     11236677888     999999999999999999999998644


No 150
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.93  E-value=2.1e-27  Score=234.53  Aligned_cols=192  Identities=25%  Similarity=0.344  Sum_probs=108.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++.....                          
T Consensus       125 ~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~--------------------------  178 (327)
T 3aln_A          125 EILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--------------------------  178 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc--------------------------
Confidence            35789999999999999998 999999999999999999999999999975432                          


Q ss_pred             CCCCcCcccccceecccccccc-ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHG-VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~-~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      ........||+.|+|||++... .+..++.++  ||||+              |+++|+|++|+.               
T Consensus       179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------  227 (327)
T 3aln_A          179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRS--DVWSL--------------GITLYELATGRF---------------  227 (327)
T ss_dssp             ---------------------------CCSHH--HHHHH--------------HHHHHHHHHSCC---------------
T ss_pred             ccccccCCCCccccCceeeccccCcCCCCchh--hHHHH--------------HHHHHHHHHCCC---------------
Confidence            1122334799999999998421 145678888  99999              999999776543               


Q ss_pred             CCCCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         160 PSTGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       160 p~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      |+.... ....+..+.......++...    +     ...++...+++     .+||+.||++|||+.|+++||||....
T Consensus       228 pf~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~l~~li-----~~~l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          228 PYPKWNSVFDQLTQVVKGDPPQLSNSE----E-----REFSPSFINFV-----NLCLTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             CSSCC-------CCCCCSCCCCCCCCS----S-----CCCCHHHHHHH-----HHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             CCCCcchHHHHHHHHhcCCCCCCCCcc----c-----ccCCHHHHHHH-----HHHhhCChhhCcCHHHHHhChHHHHhH
Confidence            222211 11111111112222222110    0     12236677788     999999999999999999999998533


Q ss_pred             CCCCCccCccccccCCCCCCCCcchHHHHHHHHHHhcCCCChhH
Q psy7309         239 SSGLSVLGSEQLLTCDHIPPPLVGETVLQDMVRQTLSNPQSKGY  282 (454)
Q Consensus       239 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  282 (454)
                      ...                  ........+.++.....|.++.|
T Consensus       294 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~  319 (327)
T 3aln_A          294 ERA------------------VEVACYVCKILDQMPATPSSPMY  319 (327)
T ss_dssp             HSC------------------CCHHHHHHHHHHHC---------
T ss_pred             hhH------------------HHHHHHHHHHHhcCCCCCCCCce
Confidence            211                  11334566666666666666655


No 151
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.93  E-value=3.8e-27  Score=232.11  Aligned_cols=165  Identities=21%  Similarity=0.220  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..+++++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       137 ~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~-----------------------~~~  193 (323)
T 3qup_A          137 QTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG-----------------------DYY  193 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccccccc-----------------------ccc
Confidence            368899999999999999999999999999999999999999999999865321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   +..|+.++  ||||+              ||++||+++ |.+               |
T Consensus       194 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ell~~g~~---------------p  239 (323)
T 3qup_A          194 RQGCASKLPVKWLALESLA---DNLYTVHS--DVWAF--------------GVTMWEIMTRGQT---------------P  239 (323)
T ss_dssp             -------CCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             cccccccCcccccCchhhc---CCCCCCcc--chhhH--------------HHHHHHHHhCCCC---------------C
Confidence            2233456788999999987   66788888  99999              999999766 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC-------hhhhhcCcc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS-------SEQNLCQPI  233 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt-------a~e~l~hp~  233 (454)
                      +.+.........+........+...             ++...+++     .+||+.||++|||       .++++.|||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          240 YAGIENAEIYNYLIGGNRLKQPPEC-------------MEEVYDLM-----YQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             TTTCCGGGHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             ccccChHHHHHHHhcCCCCCCCCcc-------------CHHHHHHH-----HHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence            4444444444444434333333332             25667788     9999999999999       677789999


Q ss_pred             cccCCCCC
Q psy7309         234 SLEGSSSG  241 (454)
Q Consensus       234 f~~~~~~~  241 (454)
                      +......+
T Consensus       302 ~~~~~~~p  309 (323)
T 3qup_A          302 VLSTSQDP  309 (323)
T ss_dssp             --------
T ss_pred             hcCCCCCC
Confidence            98765543


No 152
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.93  E-value=1.7e-27  Score=236.44  Aligned_cols=165  Identities=24%  Similarity=0.315  Sum_probs=119.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.||+.||+|||++ ||+||||||+|||++.++.+||+|||++......                         
T Consensus       153 ~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-------------------------  207 (340)
T 3an0_A          153 DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS-------------------------  207 (340)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc-------------------------
Confidence            35789999999999999997 9999999999999999999999999999865321                         


Q ss_pred             CCCCcCcccccceecccccccc-ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHG-VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~-~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                       .......||+.|+|||++... ....|+.++  ||||+              ||++|||++++.               
T Consensus       208 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~--Di~sl--------------G~il~el~tg~~---------------  255 (340)
T 3an0_A          208 -VAKTIDAGCKPYMAPERINPELNQKGYSVKS--DIWSL--------------GITMIELAILRF---------------  255 (340)
T ss_dssp             -HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHH--HHHHH--------------HHHHHHHHHTSC---------------
T ss_pred             -cccccCCCCccccCccccccccccCCCCchh--hHHHH--------------HHHHHHHHHCCC---------------
Confidence             112234799999999997521 234678888  99999              999999776543               


Q ss_pred             CCCCc-hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         160 PSTGS-NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       160 p~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      |+... .....+..........++..            ..++...++|     .+||+.||++|||+.|+++||||....
T Consensus       256 p~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~li-----~~~l~~dp~~Rps~~ell~hp~f~~~~  318 (340)
T 3an0_A          256 PYDSWGTPFQQLKQVVEEPSPQLPAD------------KFSAEFVDFT-----SQCLKKNSKERPTYPELMQHPFFTLHE  318 (340)
T ss_dssp             SSCCCSCHHHHHHHHHHSCCCCCCGG------------GSCHHHHHHH-----HHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred             CCccccchHHHHHHHhcCCCCCCCcc------------cCCHHHHHHH-----HHHccCCcccCcCHHHHhcCcCccccc
Confidence            22211 11111111111222222211            1236667888     999999999999999999999998765


Q ss_pred             CC
Q psy7309         239 SS  240 (454)
Q Consensus       239 ~~  240 (454)
                      ..
T Consensus       319 ~~  320 (340)
T 3an0_A          319 SK  320 (340)
T ss_dssp             TS
T ss_pred             cc
Confidence            54


No 153
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.93  E-value=3.4e-27  Score=229.60  Aligned_cols=177  Identities=24%  Similarity=0.340  Sum_probs=113.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........                    ....
T Consensus       121 ~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--------------------~~~~  180 (303)
T 2vwi_A          121 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD--------------------ITRN  180 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCC--------------------ccch
Confidence            36889999999999999999999999999999999999999999999986532100                    0111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++..  ...++.++  ||||+              |+++|+|++|+.               |+
T Consensus       181 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------pf  227 (303)
T 2vwi_A          181 KVRKTFVGTPCWMAPEVMEQ--VRGYDFKA--DIWSF--------------GITAIELATGAA---------------PY  227 (303)
T ss_dssp             -------CCCTTCCHHHHHH--HHCCCTHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             hhhcccCCCccccCHHHhcc--ccCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            22345689999999999861  24578888  99999              999999776543               22


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSSS  240 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~~  240 (454)
                      ....................+....   .... ....++...++|     .+||+.||.+|||++|+++||||......
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~li-----~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          228 HKYPPMKVLMLTLQNDPPSLETGVQ---DKEM-LKKYGKSFRKMI-----SLCLQKDPEKRPTAAELLRHKFFQKAKNK  297 (303)
T ss_dssp             TTSCGGGHHHHHHTSSCCCTTC--------CC-CCCCCHHHHHHH-----HHHCCSSGGGSCCHHHHHTSTTC------
T ss_pred             ccCchhhHHHHHhccCCCccccccc---cchh-hhhhhHHHHHHH-----HHHccCChhhCcCHHHHhhChhhhcCCCC
Confidence            2222111111111111111111100   0000 012235667777     99999999999999999999999865443


No 154
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.93  E-value=2.5e-27  Score=238.66  Aligned_cols=162  Identities=20%  Similarity=0.227  Sum_probs=124.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||+|+.....                       
T Consensus       181 ~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~-----------------------  237 (367)
T 3l9p_A          181 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----------------------  237 (367)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHH-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccc-----------------------
Confidence            35789999999999999999999999999999999655   4999999999866432                       


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhc
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRE  157 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~  157 (454)
                      ..........||+.|+|||++.   +..|+.++  ||||+              ||++|||++ |.+             
T Consensus       238 ~~~~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~ellt~g~~-------------  285 (367)
T 3l9p_A          238 GYYRKGGCAMLPVKWMPPEAFM---EGIFTSKT--DTWSF--------------GVLLWEIFSLGYM-------------  285 (367)
T ss_dssp             SSCTTCCGGGSCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC-------------
T ss_pred             cccccCCCcCCcccEECHHHhc---CCCCCcHH--HHHHH--------------HHHHHHHHhCCCC-------------
Confidence            1122334567899999999997   67788888  99999              999999775 432             


Q ss_pred             CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                        |+...........+........+...             ++...+++     .+||+.||.+|||+.|+++|.++...
T Consensus       286 --pf~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          286 --PYPSKSNQEVLEFVTSGGRMDPPKNC-------------PGPVYRIM-----TQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             --SSTTCCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCCHHHHHHHHHcCCCCCCCccC-------------CHHHHHHH-----HHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence              44444444445555444444333332             25566777     99999999999999999999887654


Q ss_pred             C
Q psy7309         238 S  238 (454)
Q Consensus       238 ~  238 (454)
                      .
T Consensus       346 ~  346 (367)
T 3l9p_A          346 D  346 (367)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 155
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.93  E-value=2.1e-27  Score=229.16  Aligned_cols=162  Identities=25%  Similarity=0.347  Sum_probs=117.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC----CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED----HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++    .+||+|||++.....                       
T Consensus       108 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~-----------------------  164 (283)
T 3bhy_A          108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA-----------------------  164 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC-----------------------
Confidence            46889999999999999999999999999999998877    799999999875421                       


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE  157 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~  157 (454)
                         ........||+.|+|||++.   +..++.++  ||||+              |+++|+++++..             
T Consensus       165 ---~~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~-------------  209 (283)
T 3bhy_A          165 ---GNEFKNIFGTPEFVAPEIVN---YEPLGLEA--DMWSI--------------GVITYILLSGAS-------------  209 (283)
T ss_dssp             ----------CCCGGGCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHSSC-------------
T ss_pred             ---CCcccccCCCcCccCcceec---CCCCCcch--hhhhH--------------HHHHHHHHHCCC-------------
Confidence               11233457999999999987   56788888  99999              999999766543             


Q ss_pred             CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                        |+...........+.... ..++...    +     ...++...+++     ++||+.||++|||+.|+++||||...
T Consensus       210 --p~~~~~~~~~~~~~~~~~-~~~~~~~----~-----~~~~~~~~~li-----~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          210 --PFLGETKQETLTNISAVN-YDFDEEY----F-----SNTSELAKDFI-----RRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             --TTCCSSHHHHHHHHHTTC-CCCCHHH----H-----TTCCHHHHHHH-----HTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             --CCCCcchHHHHHHhHhcc-cCCcchh----c-----ccCCHHHHHHH-----HHHccCCHhHCcCHHHHHhCHHHHHH
Confidence              333333333333333221 1111110    0     11235667788     99999999999999999999999864


Q ss_pred             C
Q psy7309         238 S  238 (454)
Q Consensus       238 ~  238 (454)
                      .
T Consensus       273 ~  273 (283)
T 3bhy_A          273 R  273 (283)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 156
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.93  E-value=5.2e-27  Score=231.26  Aligned_cols=162  Identities=27%  Similarity=0.425  Sum_probs=111.6

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      .++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....                         ...
T Consensus       130 ~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~-------------------------~~~  184 (326)
T 2x7f_A          130 WIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-------------------------TVG  184 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCc-------------------------Ccc
Confidence            5789999999999999999999999999999999999999999999875431                         111


Q ss_pred             CCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCC
Q psy7309          83 SHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p  160 (454)
                      ......||+.|+|||++...  ....++.++  ||||+              ||++|+|++|..               |
T Consensus       185 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p  233 (326)
T 2x7f_A          185 RRNTFIGTPYWMAPEVIACDENPDATYDFKS--DLWSL--------------GITAIEMAEGAP---------------P  233 (326)
T ss_dssp             ------CCGGGCCHHHHC--------CCTTH--HHHHH--------------HHHHHHHHHSSC---------------T
T ss_pred             ccccccCCccccChhhhccccccCcCCCccc--hHHHH--------------HHHHHHHHhCCC---------------C
Confidence            23445799999999998621  135677778  99999              999999776554               2


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                      +...........+..........            ...++...++|     .+||..||.+|||++|+++||||...
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~li-----~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          234 LCDMHPMRALFLIPRNPAPRLKS------------KKWSKKFQSFI-----ESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             TTTSCHHHHHHHHHHSCCCCCSC------------SCSCHHHHHHH-----HHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             CCCCcHHHHHHHhhcCccccCCc------------cccCHHHHHHH-----HHHhccChhhCCCHHHHhhChHHhhC
Confidence            22222222222222122211111            11236677888     99999999999999999999999853


No 157
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.93  E-value=5e-27  Score=228.97  Aligned_cols=164  Identities=23%  Similarity=0.286  Sum_probs=121.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       109 ~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~-----------------------~~~  165 (305)
T 2wtk_C          109 CQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF-----------------------AAD  165 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT-----------------------CSS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc-----------------------ccc
Confidence            367899999999999999999999999999999999999999999998754210                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++... ...++.++  ||||+              |+++|++++|+.               |+
T Consensus       166 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------p~  213 (305)
T 2wtk_C          166 DTCRTSQGSPAFQPPEIANGL-DTFSGFKV--DIWSA--------------GVTLYNITTGLY---------------PF  213 (305)
T ss_dssp             CEECCCCSCGGGCCHHHHTCC-SCEESHHH--HHHHH--------------HHHHHHHHHSSC---------------SC
T ss_pred             cccccCCCCCCCcChhhccCc-ccCCcchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            223345799999999998621 22345677  99999              999999766543               33


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                      .+.........+... ...++...             ++...++|     ++||+.||++|||++|+++||||.....
T Consensus       214 ~~~~~~~~~~~i~~~-~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          214 EGDNIYKLFENIGKG-SYAIPGDC-------------GPPLSDLL-----KGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             CCSSHHHHHHHHHHC-CCCCCSSS-------------CHHHHHHH-----HHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             CCchHHHHHHHHhcC-CCCCCCcc-------------CHHHHHHH-----HHHccCChhhCCCHHHHhcCcccccCCC
Confidence            333333333333322 22233221             25667788     9999999999999999999999987654


No 158
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.93  E-value=7.8e-27  Score=226.59  Aligned_cols=172  Identities=35%  Similarity=0.507  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++...........           ..........
T Consensus       116 ~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~-----------~~~~~~~~~~  184 (303)
T 1zy4_A          116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK-----------LDSQNLPGSS  184 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhc-----------cccccccccc
Confidence            46789999999999999999999999999999999999999999999985432110000           0000000112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh--hHHHHHHHhhhcCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK--TLEELKHNIRRENG  159 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~--~~~~l~~~i~~~~~  159 (454)
                      .......||+.|+|||++..  ...++.++  ||||+              ||++|+|++....  ........+.    
T Consensus       185 ~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~~l~~p~~~~~~~~~~~~~~~----  242 (303)
T 1zy4_A          185 DNLTSAIGTAMYVATEVLDG--TGHYNEKI--DMYSL--------------GIIFFEMIYPFSTGMERVNILKKLR----  242 (303)
T ss_dssp             ---------CTTSCHHHHTS--CSCCCTHH--HHHHH--------------HHHHHHHHSCCSSHHHHHHHHHHHH----
T ss_pred             cccccCCCcccccCcccccC--CCCCcchh--hHHHH--------------HHHHHHHHhccCCchhHHHHHHhcc----
Confidence            23456789999999999871  23678888  99999              9999996652211  1111111111    


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                                      .....+|...+         ....+...++|     ++||+.||.+|||++|+++||||..
T Consensus       243 ----------------~~~~~~~~~~~---------~~~~~~~~~li-----~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          243 ----------------SVSIEFPPDFD---------DNKMKVEKKII-----RLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             ----------------STTCCCCTTCC---------TTTSHHHHHHH-----HHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             ----------------ccccccCcccc---------ccchHHHHHHH-----HHHHhcCcccCcCHHHHhCCCCcCC
Confidence                            12222332211         11225567788     9999999999999999999999974


No 159
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.93  E-value=8e-27  Score=230.53  Aligned_cols=155  Identities=16%  Similarity=0.205  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       115 ~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~-----------------------~~~  171 (325)
T 3kex_A          115 QLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD-----------------------DKQ  171 (325)
T ss_dssp             THHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC-----------------------TTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcc-----------------------ccc
Confidence            468899999999999999999999999999999999999999999999865321                       112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||..|+|||++.   +..|+.++  ||||+              |+++|++++ |+.               |
T Consensus       172 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~~g~~---------------p  217 (325)
T 3kex_A          172 LLYSEAKTPIKWMALESIH---FGKYTHQS--DVWSY--------------GVTVWELMTFGAE---------------P  217 (325)
T ss_dssp             CC-----CCTTTSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             ccccCCCCcccccChHHhc---cCCCChhh--HhHHh--------------HHHHHHHHhCCCC---------------C
Confidence            2334567888999999997   67788888  99999              999999766 543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.........+........+...             +....+++     .+||+.||.+|||+.|+++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~li-----~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          218 YAGLRLAEVPDLLEKGERLAQPQIC-------------TIDVYMVM-----VKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TTTSCTTHHHHHHHTTCBCCCCTTB-------------CTTTTHHH-----HHHTCSCTTTSCCHHHHHHH
T ss_pred             ccccCHHHHHHHHHcCCCCCCCCcC-------------cHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence            3333333333444433333333332             25667888     99999999999999999876


No 160
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.93  E-value=2.2e-27  Score=232.97  Aligned_cols=166  Identities=25%  Similarity=0.351  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......                      ...
T Consensus       116 ~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~----------------------~~~  173 (311)
T 3ork_A          116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG----------------------NSV  173 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc----------------------ccc
Confidence            4688999999999999999999999999999999999999999999998653210                      111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..++.++  ||||+              |+++|||++|+.               |+
T Consensus       174 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~ll~g~~---------------pf  219 (311)
T 3ork_A          174 TQTAAVIGTAQYLSPEQAR---GDSVDARS--DVYSL--------------GCVLYEVLTGEP---------------PF  219 (311)
T ss_dssp             --------CCTTCCHHHHH---TCCCCHHH--HHHHH--------------HHHHHHHHHSSC---------------SC
T ss_pred             ccccccCcCcccCCHHHhc---CCCCCchH--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            2334468999999999997   66788888  99999              999999776543               33


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      .+......................          ...++...++|     .+||+.||.+||++.+++.|+|+....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~li-----~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          220 TGDSPVSVAYQHVREDPIPPSARH----------EGLSADLDAVV-----LKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             CCSSHHHHHHHHHHCCCCCHHHHS----------TTCCHHHHHHH-----HHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             CCCChHHHHHHHhcCCCCCccccc----------CCCCHHHHHHH-----HHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence            333222222222212111111100          11236677888     999999999999999999999998543


No 161
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.93  E-value=2.6e-27  Score=228.03  Aligned_cols=161  Identities=30%  Similarity=0.412  Sum_probs=120.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcC-----CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQG-----IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA   76 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~g-----iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (454)
                      ..++.++.|++.||+|||++|     |+||||||+|||++.++.+||+|||++......                     
T Consensus       111 ~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~---------------------  169 (279)
T 2w5a_A          111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD---------------------  169 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc---------------------
Confidence            368899999999999999999     999999999999999999999999999864310                     


Q ss_pred             cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhh
Q psy7309          77 FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRR  156 (454)
Q Consensus        77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~  156 (454)
                          ........||+.|+|||++.   +..++.++  ||||+              |+++|+++++..            
T Consensus       170 ----~~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~------------  214 (279)
T 2w5a_A          170 ----TSFAKTFVGTPYYMSPEQMN---RMSYNEKS--DIWSL--------------GCLLYELCALMP------------  214 (279)
T ss_dssp             ----CHHHHHHHSCCTTCCHHHHH---CC-CCHHH--HHHHH--------------HHHHHHHHHSSC------------
T ss_pred             ----cccccccCCCccccChHHhc---cCCCCchh--hHHHH--------------HHHHHHHHHCCC------------
Confidence                11122357899999999987   56788888  99999              999999766543            


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                         |+...........+.......++..             .++...++|     .+||+.||.+|||++|+++|+|+.+
T Consensus       215 ---p~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          215 ---PFTAFSQKELAGKIREGKFRRIPYR-------------YSDELNEII-----TRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             ---SSCCSSHHHHHHHHHHTCCCCCCTT-------------SCHHHHHHH-----HHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             ---CCcccCHHHHHHHHhhcccccCCcc-------------cCHHHHHHH-----HHHcCCCcccCCCHHHHHhChhhhh
Confidence               3333333333333333333233332             226677888     9999999999999999999999987


Q ss_pred             CCC
Q psy7309         237 GSS  239 (454)
Q Consensus       237 ~~~  239 (454)
                      ...
T Consensus       274 ~~~  276 (279)
T 2w5a_A          274 HHH  276 (279)
T ss_dssp             GGS
T ss_pred             hcc
Confidence            654


No 162
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.93  E-value=1.3e-27  Score=235.65  Aligned_cols=163  Identities=26%  Similarity=0.347  Sum_probs=115.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC---eEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH---VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~---vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.   +||+|||++.....                        
T Consensus       114 ~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~------------------------  169 (322)
T 2ycf_A          114 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE------------------------  169 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCC------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccc------------------------
Confidence            367899999999999999999999999999999987665   99999999875421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        ........||+.|+|||++.......|+.++  ||||+              ||++|+|++|..              
T Consensus       170 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Di~sl--------------G~il~~l~~g~~--------------  217 (322)
T 2ycf_A          170 --TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV--DCWSL--------------GVILFICLSGYP--------------  217 (322)
T ss_dssp             --CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --ccccccccCCcCccCchhhccCCCCCCCchh--hHHHH--------------HHHHHHHHhCCC--------------
Confidence              1112345789999999997522245678888  99999              999999776543              


Q ss_pred             CCCCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         159 GPSTGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       159 ~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                       |+...... .....+........+..     |     ...++...++|     .+||+.||++|||++|+++||||..
T Consensus       218 -pf~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~li-----~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          218 -PFSEHRTQVSLKDQITSGKYNFIPEV-----W-----AEVSEKALDLV-----KKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             -SSCSTTCSSCHHHHHHHTCCCCCHHH-----H-----TTSCHHHHHHH-----HHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             -CCcccchHHHHHHHHHhCccccCchh-----h-----hhcCHHHHHHH-----HHHcccCHhhCCCHHHHhhCcCcCC
Confidence             22211111 11111111111111111     1     11236667888     9999999999999999999999974


No 163
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=99.93  E-value=6e-26  Score=232.78  Aligned_cols=152  Identities=11%  Similarity=0.146  Sum_probs=129.8

Q ss_pred             CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc--------ccccEEEEcCCCCeEe
Q psy7309         293 KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT--------SETTASVMTRGGSIVT  364 (454)
Q Consensus       293 ~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~--------~~~~~~~~d~~G~~~~  364 (454)
                      ..+++.|++       |..+.++++|++.++++|++|||.+|.||+|++.+++..+        .+++|+|.|++|+.++
T Consensus         4 ~~~G~~~~~-------p~~~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~g~~~~~~~~~m~~~~D~~g~~~~   76 (420)
T 1qe0_A            4 IPRGTQDIL-------PEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSIT   76 (420)
T ss_dssp             CCTTCCCBC-------HHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEE
T ss_pred             CCCcccccC-------HHHHHHHHHHHHHHHHHHHHcCCEEccCcccchHHHhhhccCCccchhhhheEEEEcCCCCEEE
Confidence            445566666       8888899999999999999999999999999999987654        2589999999999999


Q ss_pred             eCCCCCHHHHHHHHHcC----CCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Q psy7309         365 LPHDLRIPFARYLAQNG----SIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFN  440 (454)
Q Consensus       365 Lr~d~T~p~aR~~a~~~----~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~  440 (454)
                      ||||.|+|+||+++.+.    ...|+|+||+|+|||+++++.||.|||+|+|+|++|.+ +..+|+|++.++.++|+.+|
T Consensus        77 Lrp~~t~~~~r~~~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~reF~q~~~e~~~~~-~~~~d~e~i~~~~~~l~~lg  155 (420)
T 1qe0_A           77 LRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAE-NPSVDAEVLAMVMHIYQSFG  155 (420)
T ss_dssp             ECSCSHHHHHHHHHHTTGGGCSSCSEEEEEEEEEECC-------CCEEEEEEEEEESCC-CHHHHHHHHHHHHHHHHHTT
T ss_pred             eCCCChHHHHHHHHhccccccCCCCeEEEEecCEeecCCCcCCCcccEEEeeEEEECCC-CchhHHHHHHHHHHHHHHcC
Confidence            99999999999998643    24699999999999999999999999999999999998 88999999999999999999


Q ss_pred             CCCcEEEcCccc
Q psy7309         441 YGNISFAPHPRV  452 (454)
Q Consensus       441 ~~~~~i~i~~~~  452 (454)
                      ++++.|.+||++
T Consensus       156 l~~~~i~l~~~g  167 (420)
T 1qe0_A          156 LKHLKLVINSVG  167 (420)
T ss_dssp             CCCEEEEEEECC
T ss_pred             CCceEEEEcccC
Confidence            988999999865


No 164
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.93  E-value=2.9e-27  Score=235.10  Aligned_cols=165  Identities=24%  Similarity=0.332  Sum_probs=99.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC---CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE---DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~---~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      .+++.++.||+.||.|||++||+||||||+|||++.+   +.+||+|||++.....                        
T Consensus       128 ~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~------------------------  183 (336)
T 3fhr_A          128 REAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ------------------------  183 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc------------------------
Confidence            4689999999999999999999999999999999864   4599999999874321                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                         ......+||+.|+|||++.   +..|+.++  ||||+              |+++|+|++|..+....-...+    
T Consensus       184 ---~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~pf~~~~~~~~----  237 (336)
T 3fhr_A          184 ---NALQTPCYTPYYVAPEVLG---PEKYDKSC--DMWSL--------------GVIMYILLCGFPPFYSNTGQAI----  237 (336)
T ss_dssp             --------------------------CHHHHHH--HHHHH--------------HHHHHHHHHSSCCC------------
T ss_pred             ---cccccCCCCcCccChhhhC---CCCCCchh--hHHHH--------------HHHHHHHHHCCCCCCCccchhh----
Confidence               1233467899999999987   67788888  99999              9999997766543211110000    


Q ss_pred             CCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                             .......+. .....++..    .|     ...++.+.+||     ++||+.||++|||++|+|+||||....
T Consensus       238 -------~~~~~~~~~-~~~~~~~~~----~~-----~~~~~~~~~li-----~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          238 -------SPGMKRRIR-LGQYGFPNP----EW-----SEVSEDAKQLI-----RLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             ---------------------CCCTT----TS-----TTCCHHHHHHH-----HHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             -------hhhHHHhhh-ccccccCch----hh-----ccCCHHHHHHH-----HHHCCCChhHCcCHHHHhcCccccccc
Confidence                   000000010 111111111    11     12236677888     999999999999999999999998643


No 165
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.93  E-value=6.2e-27  Score=236.03  Aligned_cols=154  Identities=23%  Similarity=0.301  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       203 ~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-----------------------~~~  259 (370)
T 2psq_A          203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI-----------------------DYY  259 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCC-----------------------CTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcc-----------------------cce
Confidence            357889999999999999999999999999999999999999999999854321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..|+.++  ||||+              ||++|||++ |+.               |
T Consensus       260 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~ellt~g~~---------------p  305 (370)
T 2psq_A          260 KKTTNGRLPVKWMAPEALF---DRVYTHQS--DVWSF--------------GVLMWEIFTLGGS---------------P  305 (370)
T ss_dssp             CTTTTTTSCGGGCCHHHHH---TCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             ecccCCCcccceECHhHhc---CCCCCcHH--HHHHH--------------HHHHHHHHcCCCC---------------C
Confidence            2234457789999999997   67788888  99999              999999776 432               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+........|...             ++...++|     .+||+.||.+|||+.|+++
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          306 YPGIPVEELFKLLKEGHRMDKPANC-------------TNELYMMM-----RDCWHAVPSQRPTFKQLVE  357 (370)
T ss_dssp             STTCCGGGHHHHHHTTCCCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHhcCCCCCCCCCC-------------CHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence            4444444444444444333333332             25667788     9999999999999998876


No 166
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.93  E-value=8.5e-27  Score=228.53  Aligned_cols=163  Identities=25%  Similarity=0.349  Sum_probs=110.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.....                          
T Consensus       124 ~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~--------------------------  177 (318)
T 2dyl_A          124 RILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD--------------------------  177 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC--------------------------
Confidence            35789999999999999995 999999999999999999999999999975432                          


Q ss_pred             CCCCcCcccccceecccccccc--ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHG--VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~--~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                      ........||+.|+|||++...  ....++.++  ||||+              |+++|+|++++.              
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~--Di~sl--------------G~il~~l~~g~~--------------  227 (318)
T 2dyl_A          178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA--DVWSL--------------GISLVELATGQF--------------  227 (318)
T ss_dssp             ---------CCTTCCHHHHC--------CCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             CccccccCCCccccChhhcccccccccCCcccc--chhhH--------------HHHHHHHHhCCC--------------
Confidence            1123345799999999998521  145677788  99999              999999776543              


Q ss_pred             CCCCC-chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         159 GPSTG-SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       159 ~p~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       |+.. ......+..+.......++...           ..++...++|     .+||+.||.+|||++|+++||||...
T Consensus       228 -pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~li-----~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          228 -PYKNCKTDFEVLTKVLQEEPPLLPGHM-----------GFSGDFQSFV-----KDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             -TTTTCCSHHHHHHHHHHSCCCCCCSSS-----------CCCHHHHHHH-----HHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             -CCCCCCccHHHHHHHhccCCCCCCccC-----------CCCHHHHHHH-----HHHccCChhHCcCHHHHhhCHHHHhc
Confidence             2221 1112222222223333333221           1236677888     99999999999999999999999853


No 167
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.93  E-value=8.5e-27  Score=230.69  Aligned_cols=155  Identities=19%  Similarity=0.246  Sum_probs=115.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       117 ~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~-----------------------~~~  173 (327)
T 3poz_A          117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----------------------EKE  173 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT-----------------------CC-
T ss_pred             HHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCC-----------------------ccc
Confidence            357899999999999999999999999999999999999999999999876421                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..|+.++  ||||+              ||++||+++ |+.               |
T Consensus       174 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~---------------p  219 (327)
T 3poz_A          174 YHAEGGKVPIKWMALESIL---HRIYTHQS--DVWSY--------------GVTVWELMTFGSK---------------P  219 (327)
T ss_dssp             ------CCCGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             ccccCCCccccccChHHhc---cCCCCchh--hhhhh--------------HHHHHHHHhcCCC---------------C
Confidence            2233456788999999998   67788888  99999              999999766 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.........+........+...             .....+++     .+||+.||.+|||+.|++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~li-----~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          220 YDGIPASEISSILEKGERLPQPPIC-------------TIDVYMIM-----VKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             TTTCCGGGHHHHHHTTCCCCCCTTB-------------CHHHHHHH-----HHHTCSCGGGSCCHHHHHHH
T ss_pred             ccCCCHHHHHHHHHcCCCCCCCccC-------------CHHHHHHH-----HHHcCCChhhCCCHHHHHHH
Confidence            3333333333344333333333321             25566777     99999999999999999875


No 168
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.93  E-value=3.2e-27  Score=231.32  Aligned_cols=186  Identities=25%  Similarity=0.312  Sum_probs=117.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEc-cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFID-YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++.......                      ..
T Consensus       120 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~----------------------~~  177 (320)
T 2i6l_A          120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHY----------------------SH  177 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCc----------------------cc
Confidence            36789999999999999999999999999999997 45689999999998543210                      11


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh-----hHHHHHHHhh
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK-----TLEELKHNIR  155 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~-----~~~~l~~~i~  155 (454)
                      ........||+.|+|||++..  ...++.++  ||||+              |+++||+++|+..     ....+.. +.
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Di~sl--------------G~il~el~~g~~pf~~~~~~~~~~~-~~  238 (320)
T 2i6l_A          178 KGHLSEGLVTKWYRSPRLLLS--PNNYTKAI--DMWAA--------------GCIFAEMLTGKTLFAGAHELEQMQL-IL  238 (320)
T ss_dssp             --CCCGGGSCCTTCCHHHHHC--TTCCCHHH--HHHHH--------------HHHHHHHHHSSCSSCCSSHHHHHHH-HH
T ss_pred             ccccccccccccccCcHHhcC--cccCCchh--hhHhH--------------HHHHHHHHhCCCCCCCCCHHHHHHH-HH
Confidence            123344678999999999862  35678888  99999              9999997765531     1111211 11


Q ss_pred             hcCCCCCCchhhhhhhhhc---cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCc
Q psy7309         156 RENGPSTGSNVQKSLQKFQ---KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQP  232 (454)
Q Consensus       156 ~~~~p~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp  232 (454)
                      ...+........+....+.   ... ...+.    ..+.... ...++...++|     ++||+.||++|||++|+++||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~-~~~~~~~~~li-----~~~L~~dP~~Rpt~~ell~hp  307 (320)
T 2i6l_A          239 ESIPVVHEEDRQELLSVIPVYIRND-MTEPH----KPLTQLL-PGISREAVDFL-----EQILTFSPMDRLTAEEALSHP  307 (320)
T ss_dssp             HHSCCCCHHHHHHHHTTSCHHHHHH-TTSCC----CCHHHHS-TTCCHHHHHHH-----HTTSCSSGGGSCCHHHHHTSH
T ss_pred             HhcCCCchhhhhhhhhcCccccccc-ccCCC----CChhHhc-chhhHHHHHHH-----HHHcCCCccccCCHHHHhCCc
Confidence            1111111111111110000   000 00000    0011111 12346677888     999999999999999999999


Q ss_pred             ccccCCC
Q psy7309         233 ISLEGSS  239 (454)
Q Consensus       233 ~f~~~~~  239 (454)
                      ||.....
T Consensus       308 ~~~~~~~  314 (320)
T 2i6l_A          308 YMSIYSF  314 (320)
T ss_dssp             HHHTTCC
T ss_pred             ccccccC
Confidence            9986443


No 169
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.93  E-value=1e-26  Score=228.14  Aligned_cols=165  Identities=23%  Similarity=0.334  Sum_probs=111.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++......                       ...
T Consensus       127 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~-----------------------~~~  182 (313)
T 3cek_A          127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD-----------------------TTS  182 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccCc-----------------------ccc
Confidence            36789999999999999999999999999999996 589999999999854321                       111


Q ss_pred             CCCcCcccccceecccccccc--------ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHH
Q psy7309          82 TSHTGQVGTALYAAPELDSHG--------VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHN  153 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~--------~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~  153 (454)
                      .......||+.|+|||++...        ....++.++  ||||+              |+++|+|++|+.+        
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~--Di~sl--------------G~il~el~~g~~p--------  238 (313)
T 3cek_A          183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS--DVWSL--------------GCILYYMTYGKTP--------  238 (313)
T ss_dssp             -------CCGGGCCHHHHTTCC----------CCCHHH--HHHHH--------------HHHHHHHHHSSCT--------
T ss_pred             ccccCCCCCCCcCCHHHHhhcccccccccccccCCchH--HHHHH--------------HHHHHHHHhCCCc--------
Confidence            123346799999999998621        114677788  99999              9999997765532        


Q ss_pred             hhhcCCCCCCc-hhhhhhhh-hccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         154 IRRENGPSTGS-NVQKSLQK-FQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       154 i~~~~~p~~~~-~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                             +... ........ ........++..             .+..+.++|     .+||+.||++|||++|+++|
T Consensus       239 -------f~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          239 -------FQQIINQISKLHAIIDPNHEIEFPDI-------------PEKDLQDVL-----KCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             -------TTTCCSHHHHHHHHHCTTSCCCCCCC-------------SCHHHHHHH-----HHHTCSSTTTSCCHHHHHTS
T ss_pred             -------hhhHHHHHHHHHHHHhcccccCCccc-------------chHHHHHHH-----HHHccCCcccCcCHHHHhcC
Confidence                   1111 00111111 111222222222             125667788     99999999999999999999


Q ss_pred             cccccCCC
Q psy7309         232 PISLEGSS  239 (454)
Q Consensus       232 p~f~~~~~  239 (454)
                      |||.....
T Consensus       294 ~~~~~~~~  301 (313)
T 3cek_A          294 PYVQIQTH  301 (313)
T ss_dssp             HHHHCC--
T ss_pred             ccccCCCC
Confidence            99986543


No 170
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.93  E-value=5.2e-27  Score=241.60  Aligned_cols=168  Identities=28%  Similarity=0.379  Sum_probs=109.1

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC-------------CCeEEecccchhhhhhhcCCCccccccCccC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE-------------DHVKIGDFGLATNILQKHAGPLARELTGYIL   69 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~-------------~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~   69 (454)
                      .++.++.||+.||+|||++||+||||||+|||++.+             +.+||+|||+|+.......            
T Consensus       116 ~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~------------  183 (434)
T 2rio_A          116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS------------  183 (434)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC---------------
T ss_pred             hHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc------------
Confidence            357899999999999999999999999999999754             3799999999986432100            


Q ss_pred             CCCCCCCcccCCCCCcCcccccceecccccccc----ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-Cch
Q psy7309          70 PPIDSTAFYSHDTSHTGQVGTALYAAPELDSHG----VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRP  144 (454)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~----~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~  144 (454)
                               .........+||+.|+|||++...    ....++.++  ||||+              ||++|||++ |..
T Consensus       184 ---------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~--DiwSl--------------G~il~ellt~g~~  238 (434)
T 2rio_A          184 ---------SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSI--DIFSM--------------GCVFYYILSKGKH  238 (434)
T ss_dssp             --------------------CCTTSCHHHHSCCCTTSCCCCCCTHH--HHHHH--------------HHHHHHHHTTSCC
T ss_pred             ---------cceeeecCCCCCCCccCHHHhccccccccccCcchhh--hhHhH--------------HHHHHHHHhCCCC
Confidence                     011123456899999999998621    125678888  99999              999999776 443


Q ss_pred             hhHHHHHHHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC
Q psy7309         145 KTLEELKHNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS  224 (454)
Q Consensus       145 ~~~~~l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt  224 (454)
                                     |+....... ..... . ...++... ...+     ...++.+.++|     .+||+.||++|||
T Consensus       239 ---------------Pf~~~~~~~-~~i~~-~-~~~~~~~~-~~~~-----~~~~~~~~~li-----~~~L~~dP~~Rps  289 (434)
T 2rio_A          239 ---------------PFGDKYSRE-SNIIR-G-IFSLDEMK-CLHD-----RSLIAEATDLI-----SQMIDHDPLKRPT  289 (434)
T ss_dssp             ---------------TTCSTTTHH-HHHHH-T-CCCCCCCT-TCCC-----HHHHHHHHHHH-----HHHTCSSGGGSCC
T ss_pred             ---------------CCCCchhhH-HHHhc-C-CCCccccc-cccc-----ccchHHHHHHH-----HHHhhCChhhCCC
Confidence                           221111110 00000 0 01111110 0000     11225667777     9999999999999


Q ss_pred             hhhhhcCccccc
Q psy7309         225 SEQNLCQPISLE  236 (454)
Q Consensus       225 a~e~l~hp~f~~  236 (454)
                      +.|+++||||..
T Consensus       290 ~~eil~hp~f~~  301 (434)
T 2rio_A          290 AMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHTSGGGSC
T ss_pred             HHHHHhCCccCC
Confidence            999999999963


No 171
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.92  E-value=9.7e-27  Score=232.95  Aligned_cols=174  Identities=22%  Similarity=0.339  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHc-CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ-GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~-giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++......                         
T Consensus       131 ~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------------------------  185 (360)
T 3eqc_A          131 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-------------------------  185 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc-------------------------
Confidence            35789999999999999996 9999999999999999999999999999865421                         


Q ss_pred             CCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh----hHHHHHHHhhh
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK----TLEELKHNIRR  156 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~----~~~~l~~~i~~  156 (454)
                        ......||+.|+|||++.   +..|+.++  ||||+              ||++|+|++|+.+    ...++...+..
T Consensus       186 --~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~pf~~~~~~~~~~~~~~  244 (360)
T 3eqc_A          186 --MANSFVGTRSYMSPERLQ---GTHYSVQS--DIWSM--------------GLSLVEMAVGRYPIPPPDAKELELMFGC  244 (360)
T ss_dssp             --C----CCCCTTCCHHHHT---TCCCSHHH--HHHHH--------------HHHHHHHHHTSCCSSCCCHHHHHHHHC-
T ss_pred             --cccCCCCCCCeECHHHHc---CCCCCchh--hHHHH--------------HHHHHHHHhCCCCCCCCCHHHHHHHhcc
Confidence              123458999999999998   67788888  99999              9999987665431    11121111110


Q ss_pred             cC-C-C---------------------CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhh
Q psy7309         157 EN-G-P---------------------STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKW  213 (454)
Q Consensus       157 ~~-~-p---------------------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~  213 (454)
                      .. + +                     ............+........+.            ...+....+||     ++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~li-----~~  307 (360)
T 3eqc_A          245 QVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS------------GVFSLEFQDFV-----NK  307 (360)
T ss_dssp             -----------------------------CCCHHHHHHHHHHSCCCCCCT------------TTSCHHHHHHH-----HH
T ss_pred             cccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCc------------ccccHHHHHHH-----HH
Confidence            00 0 0                     00001111112222121111111            11235667777     99


Q ss_pred             hcCCCCCCCCChhhhhcCcccccCC
Q psy7309         214 CLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       214 ~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                      ||+.||++|||++|+|+||||....
T Consensus       308 ~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          308 CLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             HHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             HhhcChhhCCCHHHHhhChHhhcch
Confidence            9999999999999999999998644


No 172
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.92  E-value=5.9e-27  Score=231.14  Aligned_cols=150  Identities=27%  Similarity=0.414  Sum_probs=113.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEc-cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFID-YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++.....                          
T Consensus       149 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~--------------------------  202 (320)
T 3a99_A          149 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--------------------------  202 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCS--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccc--------------------------
Confidence            35788999999999999999999999999999999 678999999999875421                          


Q ss_pred             CCCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                       .......||+.|+|||++.   +..+ +.++  ||||+              |+++|||++|+.+              
T Consensus       203 -~~~~~~~gt~~y~aPE~~~---~~~~~~~~~--Di~sl--------------G~il~el~~g~~p--------------  248 (320)
T 3a99_A          203 -TVYTDFDGTRVYSPPEWIR---YHRYHGRSA--AVWSL--------------GILLYDMVCGDIP--------------  248 (320)
T ss_dssp             -SCBCCCCSCGGGSCHHHHH---HSCBCHHHH--HHHHH--------------HHHHHHHHHSSCS--------------
T ss_pred             -ccccCCCCCccCCChHHhc---cCCCCCccc--hHHhH--------------HHHHHHHHHCCCC--------------
Confidence             1233457999999999987   3444 6777  99999              9999997765532              


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       +....  ...     .....++..             .++...++|     .+||+.||++|||++|+++||||...
T Consensus       249 -f~~~~--~~~-----~~~~~~~~~-------------~~~~~~~li-----~~~l~~dp~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          249 -FEHDE--EII-----RGQVFFRQR-------------VSSECQHLI-----RWCLALRPSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             -CCSHH--HHH-----HCCCCCSSC-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             -CCChh--hhh-----ccccccccc-------------CCHHHHHHH-----HHHccCChhhCcCHHHHhcCHhhcCc
Confidence             11110  000     011112222             226667888     99999999999999999999999854


No 173
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.92  E-value=2.1e-26  Score=223.34  Aligned_cols=164  Identities=25%  Similarity=0.325  Sum_probs=113.9

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.....                         ..
T Consensus       123 ~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~-------------------------~~  177 (295)
T 2clq_A          123 TIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG-------------------------IN  177 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCC-------------------------CC
Confidence            57789999999999999999999999999999987 88999999999875421                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++..+ ...++.++  ||||+              |+++|+|++|+.+....            
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~--Di~sl--------------G~il~~l~~g~~pf~~~------------  228 (295)
T 2clq_A          178 PCTETFTGTLQYMAPEIIDKG-PRGYGKAA--DIWSL--------------GCTIIEMATGKPPFYEL------------  228 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHG-GGGCSHHH--HHHHH--------------HHHHHHHHHTSCTTGGG------------
T ss_pred             CcccccCCCccccChhhhcCC-CCCCCcHH--HHHHH--------------HHHHHHHHHCCCCccCC------------
Confidence            123345799999999998721 12367778  99999              99999977655421100            


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCCC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGSS  239 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~~  239 (454)
                       ..................++..             .++...++|     .+||+.||++|||++|+++||||.....
T Consensus       229 -~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          229 -GEPQAAMFKVGMFKVHPEIPES-------------MSAEAKAFI-----LKCFEPDPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             -SSHHHHHHHHHHHCCCCCCCTT-------------SCHHHHHHH-----HHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred             -CchhHHHHhhcccccccccccc-------------CCHHHHHHH-----HHHccCChhhCCCHHHHhcChhhhhccc
Confidence             0000000000000122222322             226667888     9999999999999999999999986543


No 174
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.92  E-value=1.3e-26  Score=224.55  Aligned_cols=160  Identities=31%  Similarity=0.479  Sum_probs=118.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC---CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED---HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~---~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++   .+||+|||++.....                        
T Consensus       121 ~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~------------------------  176 (287)
T 2wei_A          121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ------------------------  176 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC------------------------
Confidence            46889999999999999999999999999999997644   699999999875421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                        ........||+.|+|||++.    ..++.++  ||||+              |+++|+++++.+              
T Consensus       177 --~~~~~~~~~~~~y~aPE~~~----~~~~~~~--Di~sl--------------G~~l~~l~~g~~--------------  220 (287)
T 2wei_A          177 --NTKMKDRIGTAYYIAPEVLR----GTYDEKC--DVWSA--------------GVILYILLSGTP--------------  220 (287)
T ss_dssp             --CSSCSCHHHHHTTCCHHHHT----TCCCTHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             --CCccccccCcccccChHHhc----CCCCCch--hhHhH--------------HHHHHHHHhCCC--------------
Confidence              12234457999999999986    3477788  99999              999999766543              


Q ss_pred             CCCCCchhhhhhhhhccCCC-CCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         159 GPSTGSNVQKSLQKFQKSPP-SVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                       |+.+.........+..... ...+..           ...++...++|     ++||..||.+|||++|+++||||.+.
T Consensus       221 -p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          221 -PFYGKNEYDILKRVETGKYAFDLPQW-----------RTISDDAKDLI-----RKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             -SSCCSSHHHHHHHHHHCCCCCCSGGG-----------TTSCHHHHHHH-----HHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             -CCCCCCHHHHHHHHHcCCCCCCchhh-----------hhcCHHHHHHH-----HHHcccChhhCcCHHHHhcCHHHhcc
Confidence             3333333333333332211 111111           11236677888     99999999999999999999999854


Q ss_pred             C
Q psy7309         238 S  238 (454)
Q Consensus       238 ~  238 (454)
                      .
T Consensus       284 ~  284 (287)
T 2wei_A          284 S  284 (287)
T ss_dssp             C
T ss_pred             c
Confidence            3


No 175
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.92  E-value=2.1e-26  Score=229.01  Aligned_cols=168  Identities=26%  Similarity=0.367  Sum_probs=117.0

Q ss_pred             hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++.....                          
T Consensus       151 ~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~--------------------------  204 (348)
T 2pml_X          151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD--------------------------  204 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBT--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEecccccccccc--------------------------
Confidence            4688999999999999999 9999999999999999999999999999875421                          


Q ss_pred             CCCCcCcccccceeccccccccccc-cccc-cCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKA-MYNQ-FTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~-~~~~-~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                       .......||+.|+|||++.   +. .++. ++  ||||+              |+++|||++|..              
T Consensus       205 -~~~~~~~~~~~y~aPE~~~---~~~~~~~~~~--Di~sl--------------G~il~~l~~g~~--------------  250 (348)
T 2pml_X          205 -KKIKGSRGTYEFMPPEFFS---NESSYNGAKV--DIWSL--------------GICLYVMFYNVV--------------  250 (348)
T ss_dssp             -TEECSSCSCGGGCCGGGGS---SCCCEEHHHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             -ccccCCCCCcCccCchhhc---CCCCCCcchh--hHHHH--------------HHHHHHHHhCCC--------------
Confidence             1234467999999999987   33 5655 77  99999              999999766543              


Q ss_pred             CCCCCchh-hhhhhhhccCCCCCCCcccccccc------ccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         159 GPSTGSNV-QKSLQKFQKSPPSVYREWRSSFEW------STVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       159 ~p~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~------~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                       |+..... ......+. .....+|.....+..      ........++...++|     .+||+.||.+|||++|+++|
T Consensus       251 -pf~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li-----~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          251 -PFSLKISLVELFNNIR-TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFL-----KLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             -SSCCSSCSHHHHHHHT-SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHH-----HHHCCSSGGGSCCHHHHHTS
T ss_pred             -CCCCCCcHHHHHHHHh-ccCcCCccchhhhhccccccccccchhhcCHHHHHHH-----HHHccCChhhCCCHHHHhcC
Confidence             2221111 12222222 111222211100000      0000022346677788     99999999999999999999


Q ss_pred             ccccc
Q psy7309         232 PISLE  236 (454)
Q Consensus       232 p~f~~  236 (454)
                      |||..
T Consensus       324 p~f~~  328 (348)
T 2pml_X          324 EWLAD  328 (348)
T ss_dssp             GGGTT
T ss_pred             ccccC
Confidence            99984


No 176
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.92  E-value=1.3e-26  Score=223.91  Aligned_cols=153  Identities=18%  Similarity=0.233  Sum_probs=106.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++......                        ..
T Consensus       116 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------~~  171 (281)
T 1mp8_A          116 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------------------------TY  171 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcc------------------------cc
Confidence            467899999999999999999999999999999999999999999999865321                        11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   ...++.++  ||||+              |+++||+++ +.+               |
T Consensus       172 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~ell~~g~~---------------p  217 (281)
T 1mp8_A          172 YKASKGKLPIKWMAPESIN---FRRFTSAS--DVWMF--------------GVCMWEILMHGVK---------------P  217 (281)
T ss_dssp             -------CCGGGCCHHHHH---HCCCSHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             cccccCCCcccccChhhcc---cCCCCCcc--CchHH--------------HHHHHHHHhcCCC---------------C
Confidence            1223446788999999987   66788888  99999              999999764 442               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+.......++...             ++...+++     .+||+.||++|||+.|+++
T Consensus       218 f~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          218 FQGVKNNDVIGRIENGERLPMPPNC-------------PPTLYSLM-----TKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             TTTCCGGGHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCcCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHccCChhhCcCHHHHHH
Confidence            4333334444444434333333332             26667788     9999999999999998876


No 177
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.92  E-value=2.7e-26  Score=227.28  Aligned_cols=154  Identities=19%  Similarity=0.254  Sum_probs=111.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       117 ~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~-----------------------~~~  173 (327)
T 3lzb_A          117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----------------------EKE  173 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc-----------------------ccc
Confidence            357899999999999999999999999999999999999999999999865321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..|+.++  ||||+              ||++|||++ |..               |
T Consensus       174 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ell~~g~~---------------p  219 (327)
T 3lzb_A          174 YHAEGGKVPIKWMALESIL---HRIYTHQS--DVWSY--------------GVTVWELMTFGSK---------------P  219 (327)
T ss_dssp             ------CCCGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             ccccCCCccccccCHHHHc---CCCCChHH--HHHHH--------------HHHHHHHHHCCCC---------------C
Confidence            2233456788999999998   67788888  99999              999999766 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+........+...             +....+++     ++||+.||.+|||++|+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          220 YDGIPASEISSILEKGERLPQPPIC-------------TIDVYMIM-----RKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             TTTCCGGGHHHHHHTTCCCCCCTTB-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCccC-------------CHHHHHHH-----HHHcCCChhHCcCHHHHHH
Confidence            4343333444444433333333332             25667777     9999999999999999886


No 178
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.92  E-value=1.7e-26  Score=221.41  Aligned_cols=154  Identities=23%  Similarity=0.344  Sum_probs=116.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++......                        ..
T Consensus       106 ~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------~~  161 (269)
T 4hcu_A          106 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD------------------------QY  161 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH------------------------HH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccc------------------------cc
Confidence            467899999999999999999999999999999999999999999999854321                        11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++ +.+               |
T Consensus       162 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~ll~~g~~---------------p  207 (269)
T 4hcu_A          162 TSSTGTKFPVKWASPEVFS---FSRYSSKS--DVWSF--------------GVLMWEVFSEGKI---------------P  207 (269)
T ss_dssp             HSTTSTTCCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             ccccCcccccccCCHHHhc---CCCCCchh--hhHHH--------------HHHHHHHhcCCCC---------------C
Confidence            1223456788999999987   67788888  99999              999999766 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...........+........+..             .++...+++     .+||+.||++|||+.|+++|
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          208 YENRSNSEVVEDISTGFRLYKPRL-------------ASTHVYQIM-----NHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             TTTCCHHHHHHHHHTTCCCCCCTT-------------SCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHhcCccCCCCCc-------------CCHHHHHHH-----HHHccCCcccCcCHHHHHHH
Confidence            333334444444443333333322             236667788     99999999999999999875


No 179
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.92  E-value=2.1e-26  Score=229.91  Aligned_cols=155  Identities=21%  Similarity=0.315  Sum_probs=114.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       193 ~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~-----------------------~~~  249 (359)
T 3vhe_A          193 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-----------------------PDY  249 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC-----------------------TTC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc-----------------------ccc
Confidence            468899999999999999999999999999999999999999999999854321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..|+.++  ||||+              |+++|||++ |..               |
T Consensus       250 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~---------------p  295 (359)
T 3vhe_A          250 VRKGDARLPLKWMAPETIF---DRVYTIQS--DVWSF--------------GVLLWEIFSLGAS---------------P  295 (359)
T ss_dssp             EEC--CEECGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHTTTSCC---------------S
T ss_pred             hhccccCCCceeEChhhhc---CCCCCchh--hhhhH--------------HHHHHHHHhcCCC---------------C
Confidence            2334567899999999998   67788888  99999              999999875 543               2


Q ss_pred             CCCchhh-hhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQ-KSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.... .....+........|..             .++...+++     .+||+.||.+|||++|+++|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          296 YPGVKIDEEFCRRLKEGTRMRAPDY-------------TTPEMYQTM-----LDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             STTCCCSHHHHHHHHHTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCccchhHHHHHHHHcCCCCCCCCC-------------CCHHHHHHH-----HHHccCChhhCCCHHHHHHH
Confidence            2222211 11222222233333332             226677888     99999999999999998875


No 180
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.92  E-value=4e-26  Score=230.88  Aligned_cols=155  Identities=23%  Similarity=0.309  Sum_probs=118.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       191 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~-----------------------~~~  247 (382)
T 3tt0_A          191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-----------------------DYY  247 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCC-----------------------CTT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccc-----------------------ccc
Confidence            368899999999999999999999999999999999999999999999754210                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              ||+++||++ +..               |
T Consensus       248 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~ellt~g~~---------------p  293 (382)
T 3tt0_A          248 KKTTNGRLPVKWMAPEALF---DRIYTHQS--DVWSF--------------GVLLWEIFTLGGS---------------P  293 (382)
T ss_dssp             CCCTTCCCGGGGSCHHHHH---SCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             ccccCCCCCcceeCHHHhc---CCCCCchh--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            2334457889999999997   67788888  99999              999999765 432               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.........+........+...             ++.+.+++     .+||+.||++|||++|++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          294 YPGVPVEELFKLLKEGHRMDKPSNC-------------TNELYMMM-----RDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             STTCCHHHHHHHHHTTCCCCCCSSC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCccC-------------CHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence            4444444444444444444333332             26667788     99999999999999988874


No 181
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.92  E-value=2.5e-26  Score=219.97  Aligned_cols=154  Identities=23%  Similarity=0.337  Sum_probs=116.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++......                        ..
T Consensus       104 ~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------------~~  159 (268)
T 3sxs_A          104 SQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD------------------------QY  159 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT------------------------CE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh------------------------hh
Confidence            468899999999999999999999999999999999999999999999754221                        11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++ ++.               |
T Consensus       160 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~g~~---------------p  205 (268)
T 3sxs_A          160 VSSVGTKFPVKWSAPEVFH---YFKYSSKS--DVWAF--------------GILMWEVFSLGKM---------------P  205 (268)
T ss_dssp             EECCSCCCCGGGCCHHHHH---HSEEETTH--HHHHH--------------HHHHHHHHTTTCC---------------T
T ss_pred             hcccCCCcCcccCCHHHHh---ccCCchhh--hhHHH--------------HHHHHHHHcCCCC---------------C
Confidence            1223445688899999987   66788888  99999              999999775 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...........+........|..             .++...+++     .+||+.||++|||+.|+++|
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          206 YDLYTNSEVVLKVSQGHRLYRPHL-------------ASDTIYQIM-----YSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             TTTSCHHHHHHHHHTTCCCCCCTT-------------SCHHHHHHH-----HHTTCSSGGGSCCHHHHHHH
T ss_pred             ccccChHHHHHHHHcCCCCCCCCc-------------ChHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence            333333333334433333333332             125667787     99999999999999999875


No 182
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.92  E-value=2.6e-26  Score=223.61  Aligned_cols=170  Identities=19%  Similarity=0.248  Sum_probs=122.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.......                      ...
T Consensus       126 ~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------~~~  183 (302)
T 4e5w_A          126 KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK----------------------EYY  183 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC----------------------CEE
T ss_pred             HHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC----------------------cce
Confidence            4678999999999999999999999999999999999999999999998543210                      011


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||..|+|||++.   +..++.++  ||||+              |+++|++++|...................
T Consensus       184 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~p~~~~~~~~~~~~~~~~  244 (302)
T 4e5w_A          184 TVKDDRDSPVFWYAPECLM---QSKFYIAS--DVWSF--------------GVTLHELLTYCDSDSSPMALFLKMIGPTH  244 (302)
T ss_dssp             ECCCCTTCCGGGCCHHHHH---HCEEEHHH--HHHHH--------------HHHHHHHHTTTCGGGSHHHHHHHHHCSCC
T ss_pred             eccCCCCCCccccCCeeec---CCCCCcch--hHHHH--------------HHHHHHHHHccCCCcchhhHHhhccCCcc
Confidence            2234457899999999997   67788888  99999              99999988766533222222222222222


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      ...........+........+...             ++...+++     .+||+.||.+|||++|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          245 GQMTVTRLVNTLKEGKRLPCPPNC-------------PDEVYQLM-----RKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             GGGHHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHTTCSSGGGSCCHHHHHH
T ss_pred             cccCHHHHHHHHhccCCCCCCCCC-------------CHHHHHHH-----HHHcCCCCCCCCCHHHHHH
Confidence            222333444444444444444332             26677888     9999999999999998875


No 183
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.92  E-value=4.9e-26  Score=223.72  Aligned_cols=152  Identities=24%  Similarity=0.307  Sum_probs=106.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      ..++.++.||+.||+|||++|  |+||||||+|||++.++.+||+|||+++....                         
T Consensus       137 ~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~-------------------------  191 (309)
T 3p86_A          137 RRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS-------------------------  191 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc-------------------------
Confidence            357889999999999999999  99999999999999999999999999975421                         


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      .........||+.|+|||++.   +..++.++  ||||+              |+++||+++++.               
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~elltg~~---------------  237 (309)
T 3p86_A          192 TFLSSKSAAGTPEWMAPEVLR---DEPSNEKS--DVYSF--------------GVILWELATLQQ---------------  237 (309)
T ss_dssp             ----------CCTTSCHHHHT---TCCCCTTH--HHHHH--------------HHHHHHHHHCCC---------------
T ss_pred             cccccccCCCCccccChhhhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------
Confidence            112234568999999999998   66788888  99999              999999776543               


Q ss_pred             CCCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         160 PSTGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       160 p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      |+...........+. ......+|...             ++...++|     ++||+.||.+|||++|+++
T Consensus       238 Pf~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          238 PWGNLNPAQVVAAVGFKCKRLEIPRNL-------------NPQVAAII-----EGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHhcCCCCCCCccC-------------CHHHHHHH-----HHHccCChhhCcCHHHHHH
Confidence            333333222222221 12233333332             26677888     9999999999999999886


No 184
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.92  E-value=2.9e-26  Score=224.28  Aligned_cols=155  Identities=20%  Similarity=0.267  Sum_probs=117.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .++++++.||+.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       150 ~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  206 (314)
T 2ivs_A          150 GDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-----------------------DSY  206 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTT-----------------------SCE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEcccccccccccc-----------------------ccc
Confidence            368899999999999999999999999999999999999999999999754321                       011


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|||++ +..               |
T Consensus       207 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~t~g~~---------------p  252 (314)
T 2ivs_A          207 VKRSQGRIPVKWMAIESLF---DHIYTTQS--DVWSF--------------GVLLWEIVTLGGN---------------P  252 (314)
T ss_dssp             ECSSCCCSCGGGCCHHHHH---HCEECHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             eeccCCCCcccccChhhhc---CCCcCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1233456789999999997   67788888  99999              999999776 433               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.........+........+..             .++...+++     .+||+.||.+|||+.|++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          253 YPGIPPERLFNLLKTGHRMERPDN-------------CSEEMYRLM-----LQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             STTCCGGGHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHhhcCCcCCCCcc-------------CCHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence            333333344444443333333332             226677888     99999999999999988864


No 185
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.92  E-value=3.1e-26  Score=221.09  Aligned_cols=154  Identities=19%  Similarity=0.309  Sum_probs=116.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++......                        ..
T Consensus       120 ~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~------------------------~~  175 (283)
T 3gen_A          120 QQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD------------------------EY  175 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH------------------------HH
T ss_pred             HHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccc------------------------cc
Confidence            468899999999999999999999999999999999999999999999854321                        01


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++ ++.               |
T Consensus       176 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~~l~~l~t~g~~---------------p  221 (283)
T 3gen_A          176 TSSVGSKFPVRWSPPEVLM---YSKFSSKS--DIWAF--------------GVLMWEIYSLGKM---------------P  221 (283)
T ss_dssp             HSTTSTTSCGGGCCHHHHH---HCCCSHHH--HHHHH--------------HHHHHHHHTTTCC---------------T
T ss_pred             ccccCCccCcccCCHHHhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1223345788999999988   66788888  99999              999999875 543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...........+........+..             .++...+++     .+||+.||.+|||++|+++|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          222 YERFTNSETAEHIAQGLRLYRPHL-------------ASEKVYTIM-----YSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             TTTSCHHHHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHTTCSSGGGSCCHHHHHHH
T ss_pred             ccccChhHHHHHHhcccCCCCCCc-------------CCHHHHHHH-----HHHccCChhHCcCHHHHHHH
Confidence            333333333333333333333322             125667788     99999999999999998875


No 186
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.92  E-value=5.6e-26  Score=222.98  Aligned_cols=166  Identities=24%  Similarity=0.298  Sum_probs=114.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....                       ...
T Consensus       132 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~-----------------------~~~  188 (307)
T 3lb7_A          132 FQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW-----------------------SGS  188 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceecccc-----------------------ccc
Confidence            367899999999999999999999999999999999999999999999744210                       112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++....+..|+.++  ||||+              |+++|||++|+.               |+
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Di~sl--------------G~il~elltg~~---------------Pf  237 (307)
T 3lb7_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQS--DVYSY--------------GIVLYELMTGEL---------------PY  237 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             ccccCCCCCcceECcceeeccCCCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            233446799999999998633356678888  99999              999999776553               22


Q ss_pred             CCchhhhh-hhhhccC-CCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         162 TGSNVQKS-LQKFQKS-PPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       162 ~~~~~~~~-~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                      ........ ...+... ..+.++...          ...++...+++     .+||+.||++|||+.|++++.+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~li-----~~~l~~~p~~RPs~~~il~~l~~l~  299 (307)
T 3lb7_A          238 SHINNRDQIIFMVGRGYASPDLSKLY----------KNCPKAMKRLV-----ADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             TTCCCHHHHHHHHHHTCCCCCSTTSC----------SSSCHHHHHHH-----HHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred             ccCCcHHHHHHHHhcCCCCcchhhhh----------cCCcHHHHHHH-----HHHhhCChhhCcCHHHHHHHHHHHH
Confidence            22111111 1111111 111111111          11236667788     9999999999999999999876543


No 187
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.92  E-value=5.4e-26  Score=225.36  Aligned_cols=154  Identities=19%  Similarity=0.245  Sum_probs=115.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       174 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  230 (343)
T 1luf_A          174 AEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA-----------------------DYY  230 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG-----------------------GCB
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccC-----------------------ccc
Confidence            357889999999999999999999999999999999999999999999865421                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|||++ |..               |
T Consensus       231 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~t~g~~---------------p  276 (343)
T 1luf_A          231 KADGNDAIPIRWMPPESIF---YNRYTTES--DVWAY--------------GVVLWEIFSYGLQ---------------P  276 (343)
T ss_dssp             C----CCBCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTTCC---------------T
T ss_pred             cccCCCcccceecChhhhc---cCCcCccc--ccHHH--------------HHHHHHHHhcCCC---------------c
Confidence            2234457899999999987   66788888  99999              999999776 442               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+........|...             ++...+++     ++||+.||.+|||+.++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          277 YYGMAHEEVIYYVRDGNILACPENC-------------PLELYNLM-----RLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             TTTSCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCChHHHHHHHhCCCcCCCCCCC-------------CHHHHHHH-----HHHcccCcccCCCHHHHHH
Confidence            3333333344444433333333332             25667788     9999999999999998876


No 188
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.92  E-value=4.2e-26  Score=222.29  Aligned_cols=162  Identities=25%  Similarity=0.335  Sum_probs=112.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....                        ...
T Consensus       111 ~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------------------------~~~  166 (294)
T 4eqm_A          111 DTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE------------------------TSL  166 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccc------------------------ccc
Confidence            46889999999999999999999999999999999999999999999985432                        111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..++.++  ||||+              |+++|+|++|+.               |+
T Consensus       167 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~ll~g~~---------------pf  212 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAK---GEATDECT--DIYSI--------------GIVLYEMLVGEP---------------PF  212 (294)
T ss_dssp             --------CCSSCCHHHHH---TCCCCTTH--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             cccCccccCccccCHhHhc---CCCCCchH--hHHHH--------------HHHHHHHHhCCC---------------CC
Confidence            2234467999999999987   66788888  99999              999999776553               33


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      .+........+......+..+....         ...++...++|     .+||+.||++||+..+.+.+.|..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~li-----~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          213 NGETAVSIAIKHIQDSVPNVTTDVR---------KDIPQSLSNVI-----LRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             CSSCHHHHHHHHHSSCCCCHHHHSC---------TTSCHHHHHHH-----HHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             CCCChHHHHHHHhhccCCCcchhcc---------cCCCHHHHHHH-----HHHhcCCHhHccccHHHHHHHHHH
Confidence            3333222222222122221111110         11236667788     999999999999777777777654


No 189
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.91  E-value=5.3e-26  Score=219.44  Aligned_cols=154  Identities=18%  Similarity=0.220  Sum_probs=112.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....                        ...
T Consensus       113 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------------------------~~~  168 (281)
T 3cc6_A          113 LTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED------------------------EDY  168 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccc------------------------ccc
Confidence            35788999999999999999999999999999999999999999999985432                        111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++ |+.               |
T Consensus       169 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~llt~g~~---------------p  214 (281)
T 3cc6_A          169 YKASVTRLPIKWMSPESIN---FRRFTTAS--DVWMF--------------AVCMWEILSFGKQ---------------P  214 (281)
T ss_dssp             ----CCCCCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTTCC---------------T
T ss_pred             cccccCCCCcceeCchhhc---cCCCCchh--ccHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1223456788999999987   66788888  99999              999999775 543               2


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...........+........+..             .++...+++     .+||..||++|||+.|++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          215 FFWLENKDVIGVLEKGDRLPKPDL-------------CPPVLYTLM-----TRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             TTTSCGGGHHHHHHHTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             cccCChHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHccCCchhCcCHHHHHHH
Confidence            222222223333332333222322             225667788     99999999999999988863


No 190
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.91  E-value=5.6e-26  Score=224.82  Aligned_cols=155  Identities=21%  Similarity=0.257  Sum_probs=114.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......                      ...
T Consensus       151 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~----------------------~~~  208 (325)
T 3kul_A          151 MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP----------------------DAA  208 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--------------------------CC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc----------------------cce
Confidence            4688999999999999999999999999999999999999999999998543210                      011


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   +..|+.++  ||||+              |+++||+++ |..               |
T Consensus       209 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ell~~g~~---------------p  254 (325)
T 3kul_A          209 YTTTGGKIPIRWTAPEAIA---FRTFSSAS--DVWSF--------------GVVMWEVLAYGER---------------P  254 (325)
T ss_dssp             EECC---CCGGGSCHHHHH---HCEECHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             eeccCCCCcccccCHhHhc---CCCCCcHH--HHHHH--------------HHHHHHHHcCCCC---------------C
Confidence            1223346688999999997   67788888  99999              999999765 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +...........+........+...             ++...++|     .+||..||.+|||+.|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          255 YWNMTNRDVISSVEEGYRLPAPMGC-------------PHALHQLM-----LDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             TTTSCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHcCCCCCCCCCc-------------CHHHHHHH-----HHHccCChhhCcCHHHHHH
Confidence            3344444444444433333333322             25667788     9999999999999998875


No 191
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.91  E-value=5.1e-26  Score=224.72  Aligned_cols=171  Identities=23%  Similarity=0.268  Sum_probs=120.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......                      ...
T Consensus       127 ~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------------~~~  184 (327)
T 3lxl_A          127 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----------------------DYY  184 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC----------------------SEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC----------------------ccc
Confidence            4688999999999999999999999999999999999999999999998543210                      111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+++++..+................
T Consensus       185 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~ll~g~~p~~~~~~~~~~~~~~~~  245 (327)
T 3lxl_A          185 VVREPGQSPIFWYAPESLS---DNIFSRQS--DVWSF--------------GVVLYELFTYCDKSCSPSAEFLRMMGCER  245 (327)
T ss_dssp             ECSSCCCSCGGGSCHHHHH---HCEEEHHH--HHHHH--------------HHHHHHHHTTTCGGGSHHHHHHHHCC---
T ss_pred             eeeccCCccccccCHHHhc---cCCCChHH--hHHHH--------------HHHHHHHHhCCCCCccccchhhhhccccc
Confidence            1234457899999999987   67788888  99999              99999987765432222211112111122


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      ...........+........+..             .++...++|     .+||+.||++|||++|++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          246 DVPALSRLLELLEEGQRLPAPPA-------------CPAEVHELM-----KLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             -CCHHHHHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             ccccHHHHHHHhhcccCCCCCCc-------------ccHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence            22223333344443333333333             226677888     99999999999999999754


No 192
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.91  E-value=5.4e-26  Score=222.73  Aligned_cols=151  Identities=28%  Similarity=0.384  Sum_probs=113.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEc-cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFID-YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSH   80 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~-~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (454)
                      ..++.++.||+.||+|||++||+||||||+||+++ .++.+||+|||++.....                          
T Consensus       139 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~--------------------------  192 (312)
T 2iwi_A          139 GPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--------------------------  192 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCS--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhccc--------------------------
Confidence            46789999999999999999999999999999999 788999999999875421                          


Q ss_pred             CCCCcCcccccceeccccccccccccc-cccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          81 DTSHTGQVGTALYAAPELDSHGVKAMY-NQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        81 ~~~~~~~~gT~~Y~aPE~~~~~~~~~~-~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                       .......||+.|+|||++.   +..+ +.++  ||||+              |+++|++++|+..              
T Consensus       193 -~~~~~~~~~~~y~aPE~~~---~~~~~~~~~--Di~sl--------------G~il~~l~~g~~p--------------  238 (312)
T 2iwi_A          193 -EPYTDFDGTRVYSPPEWIS---RHQYHALPA--TVWSL--------------GILLYDMVCGDIP--------------  238 (312)
T ss_dssp             -SCBCCCCSCTTTSCHHHHH---HSCBCHHHH--HHHHH--------------HHHHHHHHHSSCS--------------
T ss_pred             -CcccccCCcccccCceeee---cCCCCCccc--hHHHH--------------HHHHHHHHHCCCC--------------
Confidence             1234457999999999987   3444 4467  99999              9999997765532              


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                       +....  ...     .....++..             .++...++|     .+||+.||++|||++|+++||||....
T Consensus       239 -f~~~~--~~~-----~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          239 -FERDQ--EIL-----EAELHFPAH-------------VSPDCCALI-----RRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             -CCSHH--HHH-----HTCCCCCTT-------------SCHHHHHHH-----HHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             -CCChH--HHh-----hhccCCccc-------------CCHHHHHHH-----HHHccCChhhCcCHHHHhcChhhcCch
Confidence             11100  000     011122222             225667788     999999999999999999999998654


No 193
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.91  E-value=7.7e-26  Score=219.85  Aligned_cols=170  Identities=19%  Similarity=0.250  Sum_probs=113.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.......                      ...
T Consensus       114 ~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------~~~  171 (295)
T 3ugc_A          114 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----------------------EFF  171 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc----------------------cee
Confidence            3578999999999999999999999999999999999999999999998653210                      111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC-CC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN-GP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~-~p  160 (454)
                      .......||..|+|||++.   +..++.++  ||||+              |+++||++++..+............. .+
T Consensus       172 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~g~~~~~~~~~~~~~~~~~~~  232 (295)
T 3ugc_A          172 KVKEPGESPIFWYAPESLT---ESKFSVAS--DVWSF--------------GVVLYELFTYIEKSKSPPAEFMRMIGNDK  232 (295)
T ss_dssp             ----CTTCGGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHHTTCTTCSHHHHHHHHHCTTC
T ss_pred             eeccCCCCccceeCcHHhc---CCCCChHH--HHHHH--------------HHHHHHHHhcccccCCChHHHHhhhcCcc
Confidence            2233456788999999998   67788888  99999              99999977654321111111111111 11


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      ............+........|...             ++...+++     .+||+.||++|||++|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          233 QGQMIVFHLIELLKNNGRLPRPDGC-------------PDEIYMIM-----TECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             CTHHHHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHSCSSGGGSCCHHHHHH
T ss_pred             ccchhHHHHHHHHhccCcCCCCcCc-------------CHHHHHHH-----HHHcCCChhhCCCHHHHHH
Confidence            1111222333333333333333332             26677788     9999999999999998875


No 194
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91  E-value=1.7e-25  Score=217.20  Aligned_cols=156  Identities=21%  Similarity=0.245  Sum_probs=116.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.......                     ...
T Consensus       124 ~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~---------------------~~~  182 (298)
T 3pls_A          124 KDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY---------------------YSV  182 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG---------------------GCS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc---------------------ccc
Confidence            46789999999999999999999999999999999999999999999975432110                     122


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++ +.+               |
T Consensus       183 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~~---------------~  228 (298)
T 3pls_A          183 QQHRHARLPVKWTALESLQ---TYRFTTKS--DVWSF--------------GVLLWELLTRGAP---------------P  228 (298)
T ss_dssp             CCSSCTTCGGGGSCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHTSCC---------------T
T ss_pred             ccCcCCCCCccccChhhhc---cCCCChhh--chhhH--------------HHHHHHHhhCCCC---------------C
Confidence            3344567899999999998   66788888  99999              999999765 332               2


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +...........+........+..             .++...+++     .+||+.||.+|||++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          229 YRHIDPFDLTHFLAQGRRLPQPEY-------------CPDSLYQVM-----QQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             TTTSCGGGHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CccCCHHHHHHHhhcCCCCCCCcc-------------chHHHHHHH-----HHHccCChhhCcCHHHHHH
Confidence            223333333333333333333332             125667788     9999999999999998875


No 195
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.91  E-value=1.2e-25  Score=218.66  Aligned_cols=157  Identities=20%  Similarity=0.219  Sum_probs=114.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+.......                     ...
T Consensus       128 ~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~---------------------~~~  186 (298)
T 3f66_A          128 KDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY---------------------YSV  186 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG---------------------CBC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccch---------------------hcc
Confidence            46788999999999999999999999999999999999999999999985432110                     112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+++++..              .|+
T Consensus       187 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~~~--------------~~~  233 (298)
T 3f66_A          187 HNKTGAKLPVKWMALESLQ---TQKFTTKS--DVWSF--------------GVLLWELMTRGA--------------PPY  233 (298)
T ss_dssp             -----CCBCGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSC--------------CSS
T ss_pred             ccccCCCCCccccChHHhc---CCCCChHH--HHHHH--------------HHHHHHHHhCCC--------------CCC
Confidence            2344567899999999997   67788888  99999              999999766321              133


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      ...........+........+...             ++...+++     .+||+.||.+|||++|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          234 PDVNTFDITVYLLQGRRLLQPEYC-------------PDPLYEVM-----LKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             TTSCTTTHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             ccCCHHHHHHHHhcCCCCCCCccC-------------CHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence            333333333333333333333322             25567787     9999999999999998875


No 196
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.91  E-value=3.6e-26  Score=221.97  Aligned_cols=162  Identities=14%  Similarity=0.125  Sum_probs=111.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC-----eEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH-----VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA   76 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~-----vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.     +||+|||+|.........                  
T Consensus       106 ~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------  167 (298)
T 1csn_A          106 KTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK------------------  167 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccc------------------
Confidence            468899999999999999999999999999999987776     999999999855321100                  


Q ss_pred             cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhh
Q psy7309          77 FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRR  156 (454)
Q Consensus        77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~  156 (454)
                      ............||+.|+|||++.   +..++.++  ||||+              |+++|||++|+.            
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~g~~------------  216 (298)
T 1csn_A          168 QHIPYREKKNLSGTARYMSINTHL---GREQSRRD--DLEAL--------------GHVFMYFLRGSL------------  216 (298)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSSC------------
T ss_pred             ccccccCccCCCCCcccCCchhhc---CCCCChHH--HHHHH--------------HHHHHHHHcCCC------------
Confidence            001122345678999999999987   66788888  99999              999999776553            


Q ss_pred             cCCCCCCc---hhhhhhhhhccCC-CCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         157 ENGPSTGS---NVQKSLQKFQKSP-PSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       157 ~~~p~~~~---~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                         |+...   ........+.... ....+...          ...++...+++     .+||+.||++|||++++++
T Consensus       217 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~li-----~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          217 ---PWQGLKAATNKQKYERIGEKKQSTPLRELC----------AGFPEEFYKYM-----HYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             ---TTSSCCSCCHHHHHHHHHHHHHHSCHHHHT----------TTSCHHHHHHH-----HHHHHCCTTCCCCHHHHHH
T ss_pred             ---CcchhhccccHHHHHHHHhhccCccHHHHH----------hhCcHHHHHHH-----HHHhcCCcccCCCHHHHHH
Confidence               11110   1111111111000 00011100          11236677888     9999999999999998875


No 197
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.91  E-value=8.4e-26  Score=222.16  Aligned_cols=155  Identities=19%  Similarity=0.324  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......                       ..
T Consensus       138 ~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~-----------------------~~  194 (322)
T 1p4o_A          138 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD-----------------------YY  194 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGG-----------------------CE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccccccc-----------------------cc
Confidence            3678899999999999999999999999999999999999999999998653211                       11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++ +..               |
T Consensus       195 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p  240 (322)
T 1p4o_A          195 RKGGKGLLPVRWMSPESLK---DGVFTTYS--DVWSF--------------GVVLWEIATLAEQ---------------P  240 (322)
T ss_dssp             EGGGSSEECGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHHTSCC---------------T
T ss_pred             ccccCCCCCCCccChhhhc---cCCCCchh--hHHHH--------------HHHHHHHHhcCCC---------------c
Confidence            1233457899999999987   66788888  99999              999999765 332               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...........+........+..             .++...++|     .+||+.||.+|||+.|+++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          241 YQGLSNEQVLRFVMEGGLLDKPDN-------------CPDMLFELM-----RMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             TTTSCHHHHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             cccCCHHHHHHHHHcCCcCCCCCC-------------CCHHHHHHH-----HHHcCCCcccCcCHHHHHHH
Confidence            333333333333332332222222             125667788     99999999999999999976


No 198
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91  E-value=8.4e-26  Score=228.14  Aligned_cols=157  Identities=20%  Similarity=0.252  Sum_probs=106.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.......                     ...
T Consensus       192 ~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~---------------------~~~  250 (373)
T 3c1x_A          192 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF---------------------DSV  250 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccc---------------------ccc
Confidence            35788999999999999999999999999999999999999999999986532100                     111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..|+.++  ||||+              ||++||+++ +.+               |
T Consensus       251 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--DvwSl--------------G~il~ellt~~~~---------------p  296 (373)
T 3c1x_A          251 HNKTGAKLPVKWMALESLQ---TQKFTTKS--DVWSF--------------GVLLWELMTRGAP---------------P  296 (373)
T ss_dssp             -------CCGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             cccCCCCCcccccChHHhc---CCCCCcHH--HHHHH--------------HHHHHHHHhCcCC---------------C
Confidence            2234457789999999987   67788888  99999              999999776 332               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...+.......+........|...             ++...+++     .+||+.||++|||++|++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~p~~~-------------~~~l~~li-----~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          297 YPDVNTFDITVYLLQGRRLLQPEYC-------------PDPLYEVM-----LKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             CTTSCSSCHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence            3333333333333333333333322             25667787     99999999999999988863


No 199
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.91  E-value=6.2e-26  Score=218.56  Aligned_cols=152  Identities=30%  Similarity=0.454  Sum_probs=116.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....                          .
T Consensus       122 ~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--------------------------~  175 (284)
T 2a19_B          122 VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN--------------------------D  175 (284)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSC--------------------------C
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccc--------------------------c
Confidence            35789999999999999999999999999999999999999999999875421                          1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHH--HHHHhhhcCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEE--LKHNIRRENG  159 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~--l~~~i~~~~~  159 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|+++.......  ....+.    
T Consensus       176 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~~~~~~~~~~~~~~~~----  232 (284)
T 2a19_B          176 GKRTRSKGTLRYMSPEQIS---SQDYGKEV--DLYAL--------------GLILAELLHVCDTAFETSKFFTDLR----  232 (284)
T ss_dssp             SCCCCCCSCCTTSCHHHHH---CSCCCTHH--HHHHH--------------HHHHHHHHSCCSSHHHHHHHHHHHH----
T ss_pred             ccccccCCcccccChhhhc---cCCCcchh--hhHHH--------------HHHHHHHHhcCCcchhHHHHHHHhh----
Confidence            2234457999999999987   56788888  99999              99999987765433221  111111    


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccCC
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEGS  238 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~~  238 (454)
                                      .  ..++..             .++...++|     .+||+.||.+|||+.|+++|.+.....
T Consensus       233 ----------------~--~~~~~~-------------~~~~~~~li-----~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          233 ----------------D--GIISDI-------------FDKKEKTLL-----QKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             ----------------T--TCCCTT-------------SCHHHHHHH-----HHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             ----------------c--cccccc-------------CCHHHHHHH-----HHHccCChhhCcCHHHHHHHHHHHhhC
Confidence                            1  111211             125567788     999999999999999999998866533


No 200
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.91  E-value=1.1e-25  Score=220.62  Aligned_cols=155  Identities=17%  Similarity=0.186  Sum_probs=111.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       147 ~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  203 (313)
T 3brb_A          147 QTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG-----------------------DYY  203 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC--------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccc-----------------------ccc
Confidence            468999999999999999999999999999999999999999999999865321                       011


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   +..++.++  ||||+              |+++|+|++ +.+               |
T Consensus       204 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p  249 (313)
T 3brb_A          204 RQGRIAKMPVKWIAIESLA---DRVYTSKS--DVWAF--------------GVTMWEIATRGMT---------------P  249 (313)
T ss_dssp             -------CCGGGSCHHHHH---SSCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             CcccccCCCccccCchhhc---CCCccchh--hhHHH--------------HHHHHHHHhcCCC---------------C
Confidence            1233456788999999997   67788888  99999              999999776 432               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...........+........+...             ++...++|     .+||..||.+|||+.+++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          250 YPGVQNHEMYDYLLHGHRLKQPEDC-------------LDELYEIM-----YSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             STTCCGGGHHHHHHTTCCCCCBTTC-------------CHHHHHHH-----HHTTCSSGGGSCCHHHHHHH
T ss_pred             CccCCHHHHHHHHHcCCCCCCCccc-------------cHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence            3333333333334333333333332             25667788     99999999999999988763


No 201
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91  E-value=7.5e-26  Score=219.20  Aligned_cols=158  Identities=17%  Similarity=0.151  Sum_probs=118.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++.......                      ...
T Consensus       110 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------~~~  167 (287)
T 1u59_A          110 SNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD----------------------SYY  167 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS----------------------CEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc----------------------cee
Confidence            4688999999999999999999999999999999999999999999998543210                      011


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++||+++ |+.               |
T Consensus       168 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~---------------p  213 (287)
T 1u59_A          168 TARSAGKWPLKWYAPECIN---FRKFSSRS--DVWSY--------------GVTMWEALSYGQK---------------P  213 (287)
T ss_dssp             CCCCSSCCCGGGCCHHHHH---HCEECHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             eccccccccccccCHHHhc---cCCCCchh--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence            2233456789999999987   66788888  99999              999999775 543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI  233 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~  233 (454)
                      +...........+.......++...             ++...++|     .+||+.||++|||+.|+++|.+
T Consensus       214 ~~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          214 YKKMKGPEVMAFIEQGKRMECPPEC-------------PPELYALM-----SDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             TTTCCTHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHTTCSSGGGSCCHHHHHHHHH
T ss_pred             cccCCHHHHHHHHhcCCcCCCCCCc-------------CHHHHHHH-----HHHcCCChhhCcCHHHHHHHHH
Confidence            3333333333444433333333332             26677888     9999999999999999998654


No 202
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.91  E-value=1.3e-25  Score=221.77  Aligned_cols=162  Identities=20%  Similarity=0.230  Sum_probs=119.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccC---CCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYE---DHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~---~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.+   ..+||+|||++......                       
T Consensus       140 ~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~-----------------------  196 (327)
T 2yfx_A          140 LDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA-----------------------  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccc-----------------------
Confidence            3578999999999999999999999999999999854   46999999999865321                       


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhc
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRE  157 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~  157 (454)
                      ..........||+.|+|||++.   +..++.++  ||||+              |+++|+|++ |..             
T Consensus       197 ~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~-------------  244 (327)
T 2yfx_A          197 SYYRKGGCAMLPVKWMPPEAFM---EGIFTSKT--DTWSF--------------GVLLWEIFSLGYM-------------  244 (327)
T ss_dssp             -----CCGGGSCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC-------------
T ss_pred             cccccCCCcCCCcceeCHhHhc---CCCCCchh--hHHHH--------------HHHHHHHHcCCCC-------------
Confidence            1112234467899999999987   56788888  99999              999999775 432             


Q ss_pred             CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccccC
Q psy7309         158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLEG  237 (454)
Q Consensus       158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~~  237 (454)
                        |+...........+........+...             ++...++|     .+||+.||.+|||+.|+++|.|+...
T Consensus       245 --p~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          245 --PYPSKSNQEVLEFVTSGGRMDPPKNC-------------PGPVYRIM-----TQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             --SSTTCCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCcCHHHHHHHHhcCCCCCCCCCC-------------CHHHHHHH-----HHHhcCChhhCcCHHHHHHHHHHHhc
Confidence              33333333333333333333333321             25667777     99999999999999999999987654


Q ss_pred             C
Q psy7309         238 S  238 (454)
Q Consensus       238 ~  238 (454)
                      .
T Consensus       305 ~  305 (327)
T 2yfx_A          305 D  305 (327)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 203
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.91  E-value=2.6e-25  Score=218.87  Aligned_cols=100  Identities=26%  Similarity=0.457  Sum_probs=81.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE----ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI----DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl----~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      ..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+|+....                       
T Consensus       112 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~-----------------------  168 (319)
T 4euu_A          112 SEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-----------------------  168 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC-----------------------
Confidence            4688999999999999999999999999999999    7777899999999975421                       


Q ss_pred             ccCCCCCcCcccccceecccccccc-----ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCc
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHG-----VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDR  143 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~-----~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~  143 (454)
                         ........||+.|+|||++...     .+..|+.++  ||||+              ||++|||++|+
T Consensus       169 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~--Diwsl--------------G~il~el~~g~  220 (319)
T 4euu_A          169 ---DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV--DLWSI--------------GVTFYHAATGS  220 (319)
T ss_dssp             ---TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTH--HHHHH--------------HHHHHHHHHSS
T ss_pred             ---CCceeecccCCCccCHHHhhhccccccccCCCCcHH--HHHHH--------------HHHHHHHHhCC
Confidence               2233456799999999997511     135678888  99999              88888876654


No 204
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.91  E-value=1.1e-25  Score=227.24  Aligned_cols=154  Identities=21%  Similarity=0.263  Sum_probs=115.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+......                       ..
T Consensus       213 ~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~-----------------------~~  269 (377)
T 3cbl_A          213 KTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV-----------------------YA  269 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE-----------------------EE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc-----------------------ee
Confidence            4678999999999999999999999999999999999999999999987532100                       00


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   ...|+.++  ||||+              ||++||+++ |..               |
T Consensus       270 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~il~el~t~g~~---------------p  315 (377)
T 3cbl_A          270 ASGGLRQVPVKWTAPEALN---YGRYSSES--DVWSF--------------GILLWETFSLGAS---------------P  315 (377)
T ss_dssp             CCSSCCEEEGGGSCHHHHH---HCEEEHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             ecCCCCCCCcCcCCHhHhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1112235678899999997   67788888  99999              999999775 432               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +...........+........|...             ++...++|     .+||+.||++|||++++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          316 YPNLSNQQTREFVEKGGRLPCPELC-------------PDAVFRLM-----EQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             STTSCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHcCCCchhCcCHHHHHH
Confidence            4444444444444444444444332             25667788     9999999999999998875


No 205
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.91  E-value=8.9e-26  Score=222.95  Aligned_cols=152  Identities=22%  Similarity=0.242  Sum_probs=113.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....                          .
T Consensus       142 ~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~--------------------------~  195 (327)
T 1fvr_A          142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEV--------------------------Y  195 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCE--------------------------E
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccc--------------------------c
Confidence            36789999999999999999999999999999999999999999999873211                          1


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   +..++.++  ||||+              |+++|||++ |+.               |
T Consensus       196 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~---------------p  241 (327)
T 1fvr_A          196 VKKTMGRLPVRWMAIESLN---YSVYTTNS--DVWSY--------------GVLLWEIVSLGGT---------------P  241 (327)
T ss_dssp             CCC----CCTTTCCHHHHH---HCEECHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             ccccCCCCCccccChhhhc---cccCCchh--cchHH--------------HHHHHHHHcCCCC---------------C
Confidence            1223346788999999987   66788888  99999              999999875 543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.........+........+..             .++...++|     .+||+.||.+|||++|++++
T Consensus       242 f~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          242 YCGMTCAELYEKLPQGYRLEKPLN-------------CDDEVYDLM-----RQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TTTCCHHHHHHHGGGTCCCCCCTT-------------BCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCcHHHHHHHhhcCCCCCCCCC-------------CCHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence            333333334444433322222222             226677888     99999999999999999875


No 206
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.91  E-value=1.2e-25  Score=232.75  Aligned_cols=153  Identities=24%  Similarity=0.321  Sum_probs=115.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..+++++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.....                        ..
T Consensus       284 ~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~------------------------~~  339 (454)
T 1qcf_A          284 PKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN------------------------EY  339 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH------------------------HH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC------------------------ce
Confidence            357889999999999999999999999999999999999999999999864211                        01


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|..|+|||++.   ...|+.++  ||||+              ||++||+++ |+.               |
T Consensus       340 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dvwsl--------------G~~l~el~t~g~~---------------P  385 (454)
T 1qcf_A          340 TAREGAKFPIKWTAPEAIN---FGSFTIKS--DVWSF--------------GILLMEIVTYGRI---------------P  385 (454)
T ss_dssp             HTTCSSSSCGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             eccCCCcccccccCHHHhc---cCCCCcHH--HHHhH--------------HHHHHHHHhCCCC---------------C
Confidence            1123345688999999997   66788888  99999              999999776 543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+........|...             ++...++|     .+||+.||++|||+++++.
T Consensus       386 ~~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~l~~li-----~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          386 YPGMSNPEVIRALERGYRMPRPENC-------------PEELYNIM-----MRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             STTCCHHHHHHHHHHTCCCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHccCChhHCcCHHHHHH
Confidence            4444444444444433333333332             26667788     9999999999999998875


No 207
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91  E-value=1.1e-25  Score=223.53  Aligned_cols=157  Identities=22%  Similarity=0.281  Sum_probs=115.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       172 ~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~-----------------------~~~  228 (344)
T 1rjb_A          172 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD-----------------------SNY  228 (344)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGC-----------------------TTS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccC-----------------------ccc
Confidence            357889999999999999999999999999999999999999999999865321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++ |..               |
T Consensus       229 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~t~g~~---------------p  274 (344)
T 1rjb_A          229 VVRGNARLPVKWMAPESLF---EGIYTIKS--DVWSY--------------GILLWEIFSLGVN---------------P  274 (344)
T ss_dssp             EEETTEEECGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHTTTSCC---------------S
T ss_pred             eeccCccCccCccCHHHhc---cCCCChhH--hHHHH--------------HHHHHHHHcCCCC---------------C
Confidence            1233457889999999987   66788888  99999              999999875 543               2


Q ss_pred             CCCchhhhhh-hhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309         161 STGSNVQKSL-QKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI  233 (454)
Q Consensus       161 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~  233 (454)
                      +.+......+ ..+........+..             .++...+++     .+||+.||.+|||+.|+++|..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          275 YPGIPVDANFYKLIQNGFKMDQPFY-------------ATEEIYIIM-----QSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             STTCCCSHHHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cccCCcHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCCchhCcCHHHHHHHHH
Confidence            2222211111 11221222222222             226677788     9999999999999999988643


No 208
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.91  E-value=1.5e-25  Score=216.65  Aligned_cols=153  Identities=22%  Similarity=0.266  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....                        ...
T Consensus       111 ~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~------------------------~~~  166 (288)
T 3kfa_A          111 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------------------------DTY  166 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS------------------------SSS
T ss_pred             hHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccC------------------------Ccc
Confidence            35789999999999999999999999999999999999999999999985431                        111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++ +.+               |
T Consensus       167 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~ll~~g~~---------------p  212 (288)
T 3kfa_A          167 TAHAGAKFPIKWTAPESLA---YNKFSIKS--DVWAF--------------GVLLWEIATYGMS---------------P  212 (288)
T ss_dssp             EEETTEEECGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             ccccCCccccCcCChhhhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            2234456788999999987   66788888  99999              999999766 432               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +...........+........+...             ++...+++     ++||..||.+|||++|+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          213 YPGIDLSQVYELLEKDYRMERPEGC-------------PEKVYELM-----RACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             STTCCGGGHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHhccCCCCCCCCC-------------CHHHHHHH-----HHHhCCChhhCcCHHHHHH
Confidence            3333333333344333333333322             26667888     9999999999999998875


No 209
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.91  E-value=1.4e-25  Score=217.63  Aligned_cols=163  Identities=19%  Similarity=0.172  Sum_probs=110.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE---ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI---DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||++.........                  ..
T Consensus       105 ~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------~~  166 (296)
T 3uzp_A          105 KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH------------------QH  166 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC------------------CB
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc------------------cc
Confidence            4688999999999999999999999999999999   47889999999999855321100                  00


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                      ..........||+.|+|||++.   +..++.++  ||||+              |+++|||++|+.              
T Consensus       167 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~--------------  213 (296)
T 3uzp_A          167 IPYRENKNLTGTARYASINTHL---GIEQSRRD--DLESL--------------GYVLMYFNLGSL--------------  213 (296)
T ss_dssp             CCCCCSCCCCSCTTTCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             cccccccccccccccCChhhhc---CCCCCcch--hhHHH--------------HHHHHHHHhCCC--------------
Confidence            1112345678999999999998   66788888  99999              999999766553              


Q ss_pred             CCCCCc---hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         159 GPSTGS---NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       159 ~p~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                       |+...   ........+... ....+..       . .....++...+++     .+||+.||++|||++++++
T Consensus       214 -pf~~~~~~~~~~~~~~~~~~-~~~~~~~-------~-~~~~~~~~l~~li-----~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          214 -PWQGLKAATKRQKYERISEK-KMSTPIE-------V-LCKGYPSEFATYL-----NFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -TTSSCCCSSSSSHHHHHHHH-HHHSCHH-------H-HTTTSCHHHHHHH-----HHHHTSCTTCCCCHHHHHH
T ss_pred             -CCCCcCchhhhhhhhhhccc-ccCCchH-------H-HHhhCCHHHHHHH-----HHHHhcCcCcCCCHHHHHH
Confidence             11110   000011110000 0000000       0 0011225667788     9999999999999998875


No 210
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.91  E-value=1.2e-25  Score=214.76  Aligned_cols=154  Identities=23%  Similarity=0.344  Sum_probs=114.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++......                        ..
T Consensus       104 ~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~------------------------~~  159 (267)
T 3t9t_A          104 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD------------------------QY  159 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH------------------------HH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccc------------------------cc
Confidence            357899999999999999999999999999999999999999999999854211                        01


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++ +++               |
T Consensus       160 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~g~~---------------p  205 (267)
T 3t9t_A          160 TSSTGTKFPVKWASPEVFS---FSRYSSKS--DVWSF--------------GVLMWEVFSEGKI---------------P  205 (267)
T ss_dssp             HSTTSTTCCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             cccccccccccccChhhhc---CCCccchh--chhhh--------------HHHHHHHhccCCC---------------C
Confidence            1223356788999999987   66788888  99999              999999776 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...........+........+..             .++...+++     .+||+.||.+|||++|++++
T Consensus       206 ~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          206 YENRSNSEVVEDISTGFRLYKPRL-------------ASTHVYQIM-----NHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TTTCCHHHHHHHHHTTCCCCCCTT-------------SCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHhcCCcCCCCcc-------------CcHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence            333333333333333322222222             235667788     99999999999999988863


No 211
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.91  E-value=1e-25  Score=219.14  Aligned_cols=174  Identities=22%  Similarity=0.242  Sum_probs=111.4

Q ss_pred             hhHHHHHHHHHHHHHHHH--------HcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIH--------SQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPID   73 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH--------~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~   73 (454)
                      ..+++++.|++.||+|||        ++||+||||||+|||++.++.+||+|||+|+.......                
T Consensus       105 ~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~----------------  168 (301)
T 3q4u_A          105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN----------------  168 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTT----------------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccc----------------
Confidence            467899999999999999        99999999999999999999999999999975432100                


Q ss_pred             CCCcccCCCCCcCcccccceeccccccccccc---cccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHH
Q psy7309          74 STAFYSHDTSHTGQVGTALYAAPELDSHGVKA---MYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEEL  150 (454)
Q Consensus        74 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~---~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l  150 (454)
                           .........+||+.|+|||++......   .++.++  ||||+              ||++|||+++.....   
T Consensus       169 -----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~--Dvwsl--------------G~il~el~tg~~~~~---  224 (301)
T 3q4u_A          169 -----QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV--DIWAF--------------GLVLWEVARRMVSNG---  224 (301)
T ss_dssp             -----EEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHH--HHHHH--------------HHHHHHHHTTBCBTT---
T ss_pred             -----cccccccccccccceeChhhhcCcCCCCcccCCchh--hHHHH--------------HHHHHHHHhhhcCcc---
Confidence                 111123445899999999998722111   556677  99999              999999776521000   


Q ss_pred             HHHhhhcCCCCCCc-----hhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC
Q psy7309         151 KHNIRRENGPSTGS-----NVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS  224 (454)
Q Consensus       151 ~~~i~~~~~p~~~~-----~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt  224 (454)
                        .......|+...     .......... ......+|...        ......+...+++     .+||+.||++|||
T Consensus       225 --~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~li-----~~cl~~dP~~Rps  289 (301)
T 3q4u_A          225 --IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRW--------FSDPTLTSLAKLM-----KECWYQNPSARLT  289 (301)
T ss_dssp             --BCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG--------GGSHHHHHHHHHH-----HHHCCSSGGGSCC
T ss_pred             --ccccccccccccCCCCcchhhhhHHHhccCCCCCCChhh--------ccCccHHHHHHHH-----HHHhhcChhhCCC
Confidence              000112222221     1111111111 11222222210        0011224566777     9999999999999


Q ss_pred             hhhhhc
Q psy7309         225 SEQNLC  230 (454)
Q Consensus       225 a~e~l~  230 (454)
                      ++|+++
T Consensus       290 ~~~i~~  295 (301)
T 3q4u_A          290 ALRIKK  295 (301)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998875


No 212
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.91  E-value=1.4e-25  Score=219.67  Aligned_cols=155  Identities=21%  Similarity=0.317  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       148 ~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  204 (316)
T 2xir_A          148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-----------------------PDY  204 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTC-----------------------TTS
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccC-----------------------ccc
Confidence            367899999999999999999999999999999999999999999999854321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++ |..               |
T Consensus       205 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~t~g~~---------------p  250 (316)
T 2xir_A          205 VRKGDARLPLKWMAPETIF---DRVYTIQS--DVWSF--------------GVLLWEIFSLGAS---------------P  250 (316)
T ss_dssp             EEETTEEECGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             eeccCCCcceeecCchhhc---cccccchh--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1233467899999999997   67788888  99999              999999775 443               2


Q ss_pred             CCCchh-hhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNV-QKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+... ......+........+..             .++...+++     .+||+.||.+|||+.|+++|
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          251 YPGVKIDEEFCRRLKEGTRMRAPDY-------------TTPEMYQTM-----LDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             STTCCCSHHHHHHHHHTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             CcccchhHHHHHHhccCccCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence            222211 111222222222223322             226677788     99999999999999998875


No 213
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.91  E-value=3e-25  Score=213.82  Aligned_cols=149  Identities=19%  Similarity=0.266  Sum_probs=109.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....                           
T Consensus       117 ~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~---------------------------  169 (278)
T 1byg_A          117 DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---------------------------  169 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccc---------------------------
Confidence            35789999999999999999999999999999999999999999999875421                           


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                       ......+|+.|+|||++.   +..++.++  ||||+              |+++|++++ +++               |
T Consensus       170 -~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~t~g~~---------------p  214 (278)
T 1byg_A          170 -TQDTGKLPVKWTAPEALR---EKKFSTKS--DVWSF--------------GILLWEIYSFGRV---------------P  214 (278)
T ss_dssp             -------CCTTTSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             -cccCCCccccccCHHHhC---CCCCCchh--cHHHH--------------HHHHHHHHhCCCC---------------C
Confidence             112336788999999987   66788888  99999              999999775 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +...........+........+..             .++...++|     ++||+.||.+|||+.|+++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          215 YPRIPLKDVVPRVEKGYKMDAPDG-------------CPPAVYEVM-----KNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             CTTSCGGGHHHHHTTTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHhcCCCCCCccc-------------CCHHHHHHH-----HHHhcCChhhCCCHHHHHH
Confidence            333333444444443333333322             236677888     9999999999999998875


No 214
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.90  E-value=2.4e-25  Score=215.80  Aligned_cols=163  Identities=19%  Similarity=0.173  Sum_probs=111.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE---ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI---DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+........                  ..
T Consensus       105 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~------------------~~  166 (296)
T 4hgt_A          105 KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH------------------QH  166 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTC------------------CB
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccC------------------cc
Confidence            4688999999999999999999999999999999   78899999999999865321100                  00


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                      ..........||+.|+|||++.   +..++.++  ||||+              ||++|++++|+.              
T Consensus       167 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~--------------  213 (296)
T 4hgt_A          167 IPYRENKNLTGTARYASINTHL---GIEQSRRD--DLESL--------------GYVLMYFNLGSL--------------  213 (296)
T ss_dssp             CCCCCSCCCCSCGGGCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             CCCCcccccCCCccccchHHhc---CCCCCchh--HHHHH--------------HHHHHHHhcCCC--------------
Confidence            1122344678999999999998   66788888  99999              999999766543              


Q ss_pred             CCCCCch---hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         159 GPSTGSN---VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       159 ~p~~~~~---~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                       |+.+..   .......+... ....+..       . .....++...+++     .+||+.||++|||++++++
T Consensus       214 -pf~~~~~~~~~~~~~~~~~~-~~~~~~~-------~-~~~~~~~~l~~li-----~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          214 -PWQGLKAATKRQKYERISEK-KMSTPIE-------V-LCKGYPSEFATYL-----NFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -TTSSCCCSSSSSHHHHHHHH-HHHSCHH-------H-HTTTSCHHHHHHH-----HHHHTSCTTCCCCHHHHHH
T ss_pred             -CCcccchhhhhhhhhhhhcc-cccchhh-------h-hhccCCHHHHHHH-----HHHHhcCCCCCCCHHHHHH
Confidence             221110   00001100000 0000000       0 0011235667888     9999999999999998875


No 215
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.90  E-value=2e-25  Score=221.14  Aligned_cols=155  Identities=23%  Similarity=0.300  Sum_probs=115.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       157 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-----------------------~~~  213 (334)
T 2pvf_A          157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI-----------------------DYY  213 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTT-----------------------SSE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccc-----------------------ccc
Confidence            357899999999999999999999999999999999999999999999754321                       001


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++||+++ |+.               |
T Consensus       214 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~---------------p  259 (334)
T 2pvf_A          214 KKTTNGRLPVKWMAPEALF---DRVYTHQS--DVWSF--------------GVLMWEIFTLGGS---------------P  259 (334)
T ss_dssp             ECCSCCCCCGGGCCHHHHH---HCEECHHH--HHHHH--------------HHHHHHHHTTSCC---------------S
T ss_pred             cccCCCCcccceeChHHhc---CCCcChHH--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1233456789999999987   66788888  99999              999999765 433               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +.+.........+........+..             .++...+++     .+||+.||.+|||++|++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          260 YPGIPVEELFKLLKEGHRMDKPAN-------------CTNELYMMM-----RDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             STTCCHHHHHHHHHHTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             cCcCCHHHHHHHHhcCCCCCCCcc-------------CCHHHHHHH-----HHHccCChhhCcCHHHHHHH
Confidence            333333333333333333333322             125667777     99999999999999988863


No 216
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.90  E-value=2.4e-25  Score=214.48  Aligned_cols=153  Identities=25%  Similarity=0.359  Sum_probs=114.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....                        ...
T Consensus       109 ~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~------------------------~~~  164 (279)
T 1qpc_A          109 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED------------------------NEY  164 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS------------------------SCE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccC------------------------ccc
Confidence            46789999999999999999999999999999999999999999999975431                        111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |++++||++ |+.               |
T Consensus       165 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~~g~~---------------p  210 (279)
T 1qpc_A          165 TAREGAKFPIKWTAPEAIN---YGTFTIKS--DVWSF--------------GILLTEIVTHGRI---------------P  210 (279)
T ss_dssp             ECCTTCCCCTTTSCHHHHH---HCEECHHH--HHHHH--------------HHHHHHHHTTTCC---------------S
T ss_pred             ccccCCCCccCccChhhhc---cCCCCchh--hhHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1223446788999999987   66788888  99999              999999776 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+........+..             .++...+++     .+||..||++|||++++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          211 YPGMTNPEVIQNLERGYRMVRPDN-------------CPEELYQLM-----RLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             STTCCHHHHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CcccCHHHHHHHHhcccCCCCccc-------------ccHHHHHHH-----HHHhccChhhCCCHHHHHH
Confidence            333333333333333322222222             226667788     9999999999999998875


No 217
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.90  E-value=1.1e-25  Score=222.60  Aligned_cols=162  Identities=17%  Similarity=0.171  Sum_probs=112.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC-----eEEecccchhhhhhhcCCCccccccCccCCCCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH-----VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTA   76 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~-----vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.     +||+|||+|+........                  
T Consensus       105 ~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~------------------  166 (330)
T 2izr_A          105 KTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK------------------  166 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTC------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCC------------------
Confidence            468899999999999999999999999999999998887     999999999864321100                  


Q ss_pred             cccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhh
Q psy7309          77 FYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRR  156 (454)
Q Consensus        77 ~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~  156 (454)
                      ...........+||+.|+|||++.   +..++.++  ||||+              ||++|||++|+.            
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ell~g~~------------  215 (330)
T 2izr_A          167 KHIPYREHKSLTGTARYMSINTHL---GKEQSRRD--DLEAL--------------GHMFMYFLRGSL------------  215 (330)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSSC------------
T ss_pred             ccccccccCCcCCCccccChHHHc---CCCCCchh--HHHHH--------------HHHHHHHhcCCC------------
Confidence            001122345678999999999998   67788888  99999              999999776543            


Q ss_pred             cCCCCCC---chhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         157 ENGPSTG---SNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       157 ~~~p~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                         |+.+   .........+..... ..+..       ..  ....+...+++     .+||+.||.+|||++++++
T Consensus       216 ---Pf~~~~~~~~~~~~~~i~~~~~-~~~~~-------~~--~~~~p~~~~li-----~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          216 ---PWQGLKADTLKERYQKIGDTKR-ATPIE-------VL--CENFPEMATYL-----RYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             ---TTTTCCCSSHHHHHHHHHHHHH-HSCHH-------HH--TTTCHHHHHHH-----HHHHHCCTTCCCCHHHHHH
T ss_pred             ---CccccccccHHHHHHHHHhhhc-cCCHH-------HH--hccChHHHHHH-----HHHHhCCCCCCCCHHHHHH
Confidence               2222   111111111111000 00100       00  00113666777     9999999999999988875


No 218
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.90  E-value=2.6e-25  Score=215.81  Aligned_cols=155  Identities=19%  Similarity=0.229  Sum_probs=114.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.......                      ...
T Consensus       117 ~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------------~~~  174 (291)
T 1xbb_A          117 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE----------------------NYY  174 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC----------------------SEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC----------------------Ccc
Confidence            3678999999999999999999999999999999999999999999997542210                      001


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++ |..               |
T Consensus       175 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~g~~---------------p  220 (291)
T 1xbb_A          175 KAQTHGKWPVKWYAPECIN---YYKFSSKS--DVWSF--------------GVLMWEAFSYGQK---------------P  220 (291)
T ss_dssp             EC----CCCGGGCCHHHHH---HCEEEHHH--HHHHH--------------HHHHHHHHTTTCC---------------S
T ss_pred             cccccCCCCceeeChHHhc---cCCCChhh--hHHHH--------------HHHHHHHHhcCCC---------------C
Confidence            1223345788999999997   66788888  99999              999999776 543               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+........+...             ++...+++     .+||+.||++|||+.++++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          221 YRGMKGSEVTAMLEKGERMGCPAGC-------------PREMYDLM-----NLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             STTCCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence            3333333333344333333333332             26677888     9999999999999998875


No 219
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.90  E-value=3e-25  Score=229.65  Aligned_cols=153  Identities=23%  Similarity=0.307  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....                        ...
T Consensus       280 ~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~------------------------~~~  335 (452)
T 1fmk_A          280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED------------------------NEY  335 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCC------------------------Cce
Confidence            46789999999999999999999999999999999999999999999985532                        111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|..|+|||++.   ...|+.++  ||||+              |+++||+++ |+.               |
T Consensus       336 ~~~~~~~~~~~y~aPE~~~---~~~~~~~s--Dvwsl--------------G~~l~el~t~g~~---------------P  381 (452)
T 1fmk_A          336 TARQGAKFPIKWTAPEAAL---YGRFTIKS--DVWSF--------------GILLTELTTKGRV---------------P  381 (452)
T ss_dssp             -------CCGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTTCC---------------S
T ss_pred             ecccCCcccccccCHhHHh---cCCCCccc--cHHhH--------------HHHHHHHHhCCCC---------------C
Confidence            1223446788999999987   66788888  99999              999999776 443               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+........|...             ++...++|     .+||+.||++|||+++++.
T Consensus       382 ~~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~l~~li-----~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          382 YPGMVNREVLDQVERGYRMPCPPEC-------------PESLHDLM-----CQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             STTCCHHHHHHHHHTTCCCCCCTTS-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHccCChhhCcCHHHHHH
Confidence            4444444444444444333333332             25667788     9999999999999999886


No 220
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.90  E-value=3.7e-25  Score=214.72  Aligned_cols=160  Identities=26%  Similarity=0.378  Sum_probs=103.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       120 ~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  176 (289)
T 3og7_A          120 KKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW-----------------------SGS  176 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccc-----------------------ccc
Confidence            467899999999999999999999999999999999999999999999754321                       112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.......++.++  ||||+              |+++|++++++.               |+
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Di~sl--------------G~il~el~~g~~---------------p~  225 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQS--DVYAF--------------GIVLYELMTGQL---------------PY  225 (289)
T ss_dssp             -------CCCTTCCHHHHC----CCSCHHH--HHHHH--------------HHHHHHHHHSSC---------------TT
T ss_pred             ccccccCCCccccCchhhcccCCCCCCccc--chHHH--------------HHHHHHHHHCCC---------------Cc
Confidence            233456799999999998643356677788  99999              999999766543               22


Q ss_pred             CCchhhh-hhhhhccCCC-CCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         162 TGSNVQK-SLQKFQKSPP-SVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       162 ~~~~~~~-~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      ....... ....+..... ..++...          ...++...+++     .+||+.||.+|||++|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~li-----~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          226 SNINNRDQIIEMVGRGSLSPDLSKVR----------SNCPKRMKRLM-----AECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             SSCCCHHHHHHHHHHTSCCCCTTSSC----------TTSCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             cccchHHHHHHHhcccccCcchhhcc----------ccCCHHHHHHH-----HHHccCChhhCCCHHHHHH
Confidence            2211111 1111111111 1111110          11236667788     9999999999999998875


No 221
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.90  E-value=2e-25  Score=219.88  Aligned_cols=170  Identities=21%  Similarity=0.253  Sum_probs=115.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......                      ...
T Consensus       134 ~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~----------------------~~~  191 (318)
T 3lxp_A          134 AQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH----------------------EYY  191 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC----------------------SEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccc----------------------ccc
Confidence            4688999999999999999999999999999999999999999999998543210                      001


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++++................+.
T Consensus       192 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~ll~g~~p~~~~~~~~~~~~~~~~  252 (318)
T 3lxp_A          192 RVREDGDSPVFWYAPECLK---EYKFYYAS--DVWSF--------------GVTLYELLTHCDSSQSPPTKFLELIGIAQ  252 (318)
T ss_dssp             EC---CCCCGGGCCHHHHH---HCEEEHHH--HHHHH--------------HHHHHHHHTTTCGGGSHHHHHHHHHCSCC
T ss_pred             ccccCCCCCceeeChHHhc---CCCCCcHH--HHHHH--------------HHHHHHHHhCCCcccccchhhhhhhcccc
Confidence            1233457889999999997   66788888  99999              99999987765422111111101001111


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      ...........+........+..             .++...++|     ++||+.||++|||++|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          253 GQMTVLRLTELLERGERLPRPDK-------------CPAEVYHLM-----KNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             cchhHHHHHHHHhcccCCCCCcc-------------ccHHHHHHH-----HHHcCCCcccCcCHHHHHH
Confidence            11111122222332333333332             226677788     9999999999999998874


No 222
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.90  E-value=3.2e-25  Score=229.32  Aligned_cols=149  Identities=19%  Similarity=0.268  Sum_probs=114.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....                           
T Consensus       289 ~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~---------------------------  341 (450)
T 1k9a_A          289 DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---------------------------  341 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc---------------------------
Confidence            35788999999999999999999999999999999999999999999874311                           


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                       ......+|+.|+|||++.   +..|+.++  ||||+              |+++||+++ |+.               |
T Consensus       342 -~~~~~~~~~~y~aPE~~~---~~~~~~~s--Dvwsl--------------G~~l~el~t~g~~---------------P  386 (450)
T 1k9a_A          342 -TQDTGKLPVKWTAPEALR---EKKFSTKS--DVWSF--------------GILLWEIYSFGRV---------------P  386 (450)
T ss_dssp             ------CCCTTTSCHHHHH---SSCCCHHH--HHHHH--------------HHHHHHHHTTTCC---------------S
T ss_pred             -cccCCCCCcceeCHHHhc---CCCCCcHH--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence             112236688999999997   67788888  99999              999999875 443               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +...........+..+.....|...             ++...++|     .+||+.||++|||+.|++.
T Consensus       387 ~~~~~~~~~~~~i~~~~~~~~p~~~-------------~~~l~~li-----~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          387 YPRIPLKDVVPRVEKGYKMDAPDGC-------------PPAVYDVM-----KNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             STTSCTTTHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCcC-------------CHHHHHHH-----HHHcCCChhHCcCHHHHHH
Confidence            4444444444455444444444432             26677888     9999999999999998875


No 223
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90  E-value=6.2e-25  Score=217.94  Aligned_cols=156  Identities=19%  Similarity=0.221  Sum_probs=109.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......                      ...
T Consensus       147 ~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------------~~~  204 (333)
T 1mqb_A          147 LQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP----------------------EAT  204 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccc----------------------ccc
Confidence            4688999999999999999999999999999999999999999999998653210                      001


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   +..++.++  ||||+              |+++||+++ |+.               |
T Consensus       205 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~---------------p  250 (333)
T 1mqb_A          205 YTTSGGKIPIRWTAPEAIS---YRKFTSAS--DVWSF--------------GIVMWEVMTYGER---------------P  250 (333)
T ss_dssp             ------CCCGGGSCHHHHH---SCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             cccCCCCccccccCchhcc---cCCCCchh--hhHHH--------------HHHHHHHHcCCCC---------------C
Confidence            1222345688999999987   66788888  99999              999999765 443               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                      +...........+........+..             .++...+++     .+||+.||++|||+.|++++
T Consensus       251 f~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          251 YWELSNHEVMKAINDGFRLPTPMD-------------CPSAIYQLM-----MQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             TTTCCHHHHHHHHHTTCCCCCCTT-------------CBHHHHHHH-----HHHTCSSTTTSCCHHHHHHH
T ss_pred             cccCCHHHHHHHHHCCCcCCCccc-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHHH
Confidence            333333333333333322222222             125667788     99999999999999988864


No 224
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.90  E-value=7.8e-25  Score=234.67  Aligned_cols=180  Identities=24%  Similarity=0.198  Sum_probs=114.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC---eEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH---VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~---vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.   +||+|||++.....                        
T Consensus       121 ~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~------------------------  176 (676)
T 3qa8_A          121 GPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ------------------------  176 (676)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc------------------------
Confidence            468899999999999999999999999999999997765   89999999985421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHH--HHHHHhhh
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLE--ELKHNIRR  156 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~--~l~~~i~~  156 (454)
                        ........||+.|+|||++.   +..|+.++  ||||+              |+++|++++|..+...  ....... 
T Consensus       177 --~~~~~~~~gt~~Y~APE~l~---~~~~s~ks--DIwSL--------------GviLyeLltG~~Pf~~~~~~~~~~~-  234 (676)
T 3qa8_A          177 --GELCTEFVGTLQYLAPELLE---QKKYTVTV--DYWSF--------------GTLAFECITGFRPFLPNWQPVQWHG-  234 (676)
T ss_dssp             --CCCCCCCCSCCTTCSSCSSC---CSCCSTTH--HHHHH--------------HHHHHHHHSSCSSCCSSCHHHHSST-
T ss_pred             --ccccccccCCcccCChHHhc---cCCCCchh--HHHHH--------------HHHHHHHHHCCCCCCcccchhhhhh-
Confidence              22334568999999999997   67888888  99999              9999997776432100  0000000 


Q ss_pred             cCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCccccc
Q psy7309         157 ENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISLE  236 (454)
Q Consensus       157 ~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~~  236 (454)
                         .............-.......++...   ++........++.+.++|     ++||..||++|||++|+++||||..
T Consensus       235 ---~i~~~~~~~~~~~~~l~g~~~~~~~l---p~p~~l~~~ls~~L~dLI-----~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          235 ---KVREKSNEHIVVYDDLTGAVKFSSVL---PTPNHLSGILAGKLERWL-----QCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             ---TCC------CCSCCCCSSSCCCCSSS---CCSCCCCGGGHHHHHHHH-----HHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             ---hhhcccchhhhhhhhhcccccccccc---CCchhhchhhhHHHHHHH-----HHHccCCHhhCcCHHHHhcCHHHHH
Confidence               00000000000000000111111110   000001112235566677     9999999999999999999999986


Q ss_pred             CC
Q psy7309         237 GS  238 (454)
Q Consensus       237 ~~  238 (454)
                      ..
T Consensus       304 l~  305 (676)
T 3qa8_A          304 LD  305 (676)
T ss_dssp             HH
T ss_pred             HH
Confidence            43


No 225
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.90  E-value=5.9e-25  Score=236.65  Aligned_cols=155  Identities=19%  Similarity=0.229  Sum_probs=116.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.+....                      ...
T Consensus       469 ~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~----------------------~~~  526 (635)
T 4fl3_A          469 KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE----------------------NYY  526 (635)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCc----------------------ccc
Confidence            3678999999999999999999999999999999999999999999998653210                      111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      ...+...||+.|+|||++.   +..|+.++  ||||+              ||++|||++ |+.               |
T Consensus       527 ~~~~~~~~t~~y~APE~~~---~~~~~~~s--DvwSl--------------Gv~l~ellt~G~~---------------P  572 (635)
T 4fl3_A          527 KAQTHGKWPVKWYAPECIN---YYKFSSKS--DVWSF--------------GVLMWEAFSYGQK---------------P  572 (635)
T ss_dssp             --------CGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTTCC---------------S
T ss_pred             ccccCCCCceeeeChhhhc---CCCCCcHH--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            2234456789999999997   67788888  99999              999999775 543               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+........|...             ++.+.++|     .+||+.||++|||++++++
T Consensus       573 f~~~~~~~~~~~i~~~~~~~~p~~~-------------~~~l~~li-----~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          573 YRGMKGSEVTAMLEKGERMGCPAGC-------------PREMYDLM-----NLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             STTCCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHcCCCHhHCcCHHHHHH
Confidence            4455555555555545444444442             26677788     9999999999999998874


No 226
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.90  E-value=3.5e-25  Score=231.79  Aligned_cols=152  Identities=21%  Similarity=0.270  Sum_probs=116.1

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCC
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDT   82 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (454)
                      .++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....                        ....
T Consensus       319 ~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~------------------------~~~~  374 (495)
T 1opk_A          319 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG------------------------DTYT  374 (495)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT------------------------CCEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccC------------------------Ccee
Confidence            5788999999999999999999999999999999999999999999985421                        1111


Q ss_pred             CCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCCC
Q psy7309          83 SHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        83 ~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+|..|+|||++.   ...|+.++  ||||+              ||++|||++ |..               |+
T Consensus       375 ~~~~~~~~~~y~aPE~~~---~~~~~~~s--DvwSl--------------G~~l~el~t~g~~---------------p~  420 (495)
T 1opk_A          375 AHAGAKFPIKWTAPESLA---YNKFSIKS--DVWAF--------------GVLLWEIATYGMS---------------PY  420 (495)
T ss_dssp             CCTTCCCCGGGCCHHHHH---HCEECHHH--HHHHH--------------HHHHHHHHTTSCC---------------SS
T ss_pred             ecCCCcCCcceeCHhHHh---cCCCCcHH--hHHhH--------------HHHHHHHHhCCCC---------------CC
Confidence            223445688999999997   67788888  99999              999999776 432               44


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      .+.........+........|...             ++.+.++|     .+||+.||++|||+.++++
T Consensus       421 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~l~~li-----~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          421 PGIDLSQVYELLEKDYRMERPEGC-------------PEKVYELM-----RACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             TTCCGGGHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHcCcChhHCcCHHHHHH
Confidence            444444444444433333333332             26667788     9999999999999998875


No 227
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.90  E-value=4.1e-25  Score=216.00  Aligned_cols=154  Identities=24%  Similarity=0.324  Sum_probs=111.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       145 ~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  201 (313)
T 1t46_A          145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND-----------------------SNY  201 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSC-----------------------TTS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccc-----------------------ccc
Confidence            467899999999999999999999999999999999999999999999854321                       011


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|+|++ +..               |
T Consensus       202 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ellt~g~~---------------p  247 (313)
T 1t46_A          202 VVKGNARLPVKWMAPESIF---NCVYTFES--DVWSY--------------GIFLWELFSLGSS---------------P  247 (313)
T ss_dssp             EECSSSEECGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTTCC---------------S
T ss_pred             eeccCCCCcceeeChHHhc---CCCCChHH--HHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1233456889999999987   66788888  99999              999999775 443               2


Q ss_pred             CCCchhhhhh-hhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSL-QKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+....... ..+........+..             .++...+++     .+||+.||.+|||++|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~ell~  300 (313)
T 1t46_A          248 YPGMPVDSKFYKMIKEGFRMLSPEH-------------APAEMYDIM-----KTCWDADPLKRPTFKQIVQ  300 (313)
T ss_dssp             STTCCSSHHHHHHHHHTCCCCCCTT-------------SCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCcccchhHHHHHhccCCCCCCccc-------------CCHHHHHHH-----HHHcCCCchhCcCHHHHHH
Confidence            2222111111 11111111111221             225667788     9999999999999998886


No 228
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.90  E-value=4.3e-25  Score=213.55  Aligned_cols=149  Identities=19%  Similarity=0.257  Sum_probs=110.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC--------eEEecccchhhhhhhcCCCccccccCccCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH--------VKIGDFGLATNILQKHAGPLARELTGYILPPID   73 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~--------vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~   73 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.        +||+|||++....                    
T Consensus       113 ~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~--------------------  172 (289)
T 4fvq_A          113 LWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVL--------------------  172 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTS--------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCccccccc--------------------
Confidence            357899999999999999999999999999999998887        9999999986432                    


Q ss_pred             CCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHH
Q psy7309          74 STAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHN  153 (454)
Q Consensus        74 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~  153 (454)
                               ......||+.|+|||++..  ...++.++  ||||+              |+++|||+++..         
T Consensus       173 ---------~~~~~~~~~~y~aPE~~~~--~~~~~~~~--Diwsl--------------G~il~el~~g~~---------  216 (289)
T 4fvq_A          173 ---------PKDILQERIPWVPPECIEN--PKNLNLAT--DKWSF--------------GTTLWEICSGGD---------  216 (289)
T ss_dssp             ---------CHHHHHHTTTTSCHHHHHC--GGGCCHHH--HHHHH--------------HHHHHHHHTTTC---------
T ss_pred             ---------CccccCCcCcccCHHHhCC--CCCCCchh--HHHHH--------------HHHHHHHHcCCC---------
Confidence                     1123468899999999871  26688888  99999              999999876432         


Q ss_pred             hhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         154 IRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       154 i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                           .|+..............  ...++..             .++...+++     ++||+.||++|||++|+++|
T Consensus       217 -----~~~~~~~~~~~~~~~~~--~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          217 -----KPLSALDSQRKLQFYED--RHQLPAP-------------KAAELANLI-----NNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             -----CTTTTSCHHHHHHHHHT--TCCCCCC-------------SSCTTHHHH-----HHHSCSSGGGSCCHHHHHHH
T ss_pred             -----CCccccchHHHHHHhhc--cCCCCCC-------------CCHHHHHHH-----HHHcCCChhHCcCHHHHHHH
Confidence                 12222222222222221  1222222             125677888     99999999999999999874


No 229
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.90  E-value=3.7e-25  Score=218.24  Aligned_cols=167  Identities=19%  Similarity=0.205  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      ..++.++.||+.||+|||++|  |+||||||+|||++.++.+||+|||+++..........            . .....
T Consensus       136 ~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~------------~-~~~~~  202 (337)
T 3ll6_A          136 DTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW------------S-AQRRA  202 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccc------------c-ccccc
Confidence            468899999999999999999  99999999999999999999999999985432100000            0 00000


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      .........||+.|+|||++....+..++.++  ||||+              |+++|+|++++.+..            
T Consensus       203 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~--Dv~sl--------------G~il~el~~g~~p~~------------  254 (337)
T 3ll6_A          203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ--DIWAL--------------GCILYLLCFRQHPFE------------  254 (337)
T ss_dssp             ---------------------CCTTSCSSHHH--HHHHH--------------HHHHHHHHHSSCCC-------------
T ss_pred             cchhhccccCCCCcCChhhhhccccCCCChHH--hHHHH--------------HHHHHHHHhCCCCCc------------
Confidence            11122356799999999998432356778888  99999              999999776554221            


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI  233 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~  233 (454)
                         ........     ......+..           ........++|     ++||+.||.+|||++|+++|-+
T Consensus       255 ---~~~~~~~~-----~~~~~~~~~-----------~~~~~~~~~li-----~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          255 ---DGAKLRIV-----NGKYSIPPH-----------DTQYTVFHSLI-----RAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             -------------------CCCCTT-----------CCSSGGGHHHH-----HHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ---chhHHHhh-----cCcccCCcc-----------cccchHHHHHH-----HHHccCChhhCcCHHHHHHHHH
Confidence               11111000     001111111           11225567788     9999999999999999998754


No 230
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.90  E-value=3.1e-25  Score=218.94  Aligned_cols=104  Identities=25%  Similarity=0.359  Sum_probs=84.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHc----------CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ----------GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPP   71 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~----------giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~   71 (454)
                      ..++.++.|++.||+|||++          ||+||||||+|||++.++.+||+|||+|+.....                
T Consensus       121 ~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~----------------  184 (322)
T 3soc_A          121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG----------------  184 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTT----------------
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccc----------------
Confidence            46889999999999999999          9999999999999999999999999999755321                


Q ss_pred             CCCCCcccCCCCCcCcccccceeccccccccc--cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309          72 IDSTAFYSHDTSHTGQVGTALYAAPELDSHGV--KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP  144 (454)
Q Consensus        72 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~--~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~  144 (454)
                             .........+||+.|+|||++....  ...++.++  ||||+              ||++|||++|+.
T Consensus       185 -------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~--Diwsl--------------G~il~el~tg~~  236 (322)
T 3soc_A          185 -------KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRI--DMYAM--------------GLVLWELASRCT  236 (322)
T ss_dssp             -------SCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHH--HHHHH--------------HHHHHHHHTTBT
T ss_pred             -------cCccccccCccCccccCHhhcccccccCcCCCccc--hhHHH--------------HHHHHHHHhCCC
Confidence                   1122334568999999999987211  14667777  99999              999999877654


No 231
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.90  E-value=4.7e-25  Score=222.55  Aligned_cols=155  Identities=21%  Similarity=0.236  Sum_probs=103.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......                      ...
T Consensus       147 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~----------------------~~~  204 (373)
T 2qol_A          147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP----------------------EAA  204 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC----------------------ccc
Confidence            3678999999999999999999999999999999999999999999998653210                      001


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   +..|+.++  ||||+              |+++||+++ |+.               |
T Consensus       205 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~Sl--------------G~il~ellt~g~~---------------P  250 (373)
T 2qol_A          205 YTTRGGKIPIRWTSPEAIA---YRKFTSAS--DVWSY--------------GIVLWEVMSYGER---------------P  250 (373)
T ss_dssp             ---------CTTSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTC-C---------------T
T ss_pred             eeccCCCcCCCccChhhhc---cCCcCchh--cHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1122335678899999997   67788888  99999              999999654 433               3


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +...........+........+..             ......+++     .+||+.||++|||++|+++
T Consensus       251 ~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          251 YWEMSNQDVIKAVDEGYRLPPPMD-------------CPAALYQLM-----LDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             TTTCCHHHHHHHHHTTEECCCCTT-------------CBHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCcc-------------ccHHHHHHH-----HHHhCcChhhCcCHHHHHH
Confidence            333333333333332222222221             125566777     9999999999999998875


No 232
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90  E-value=7e-25  Score=216.61  Aligned_cols=172  Identities=22%  Similarity=0.288  Sum_probs=108.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHc--------CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ--------GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPID   73 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~--------giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~   73 (454)
                      ..++.++.|++.||+|||++        ||+||||||+|||++.++.+||+|||+|........                
T Consensus       134 ~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~----------------  197 (337)
T 3mdy_A          134 KSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTN----------------  197 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC--------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccc----------------
Confidence            46789999999999999998        999999999999999999999999999975432100                


Q ss_pred             CCCcccCCCCCcCcccccceecccccccccccccccc------CCccccchhhhHHHHHHHHHhcceeeeeecCCchhhH
Q psy7309          74 STAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQF------TPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTL  147 (454)
Q Consensus        74 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~------~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~  147 (454)
                           .........+||+.|+|||++.   +..++..      +  ||||+              ||++|||+++.....
T Consensus       198 -----~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~~~~~~--Diwsl--------------G~il~el~tg~~~~~  253 (337)
T 3mdy_A          198 -----EVDIPPNTRVGTKRYMPPEVLD---ESLNRNHFQSYIMA--DMYSF--------------GLILWEVARRCVSGG  253 (337)
T ss_dssp             ----------CCSSCSCGGGCCHHHHT---TCCCTTCTHHHHHH--HHHHH--------------HHHHHHHHTTBCBTT
T ss_pred             -----cccCCCCCCccCcceeChhhcc---cccCCccccCcccc--chHHH--------------HHHHHHHHhccCccc
Confidence                 1111233568999999999987   3334433      6  99999              999999776532100


Q ss_pred             HHHHHHhhhcCCCCCCc-----hhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCC
Q psy7309         148 EELKHNIRRENGPSTGS-----NVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSK  221 (454)
Q Consensus       148 ~~l~~~i~~~~~p~~~~-----~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~  221 (454)
                           .......|+...     .......... ......++....        .....+...+++     .+||+.||++
T Consensus       254 -----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li-----~~~l~~dP~~  315 (337)
T 3mdy_A          254 -----IVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWS--------SDECLRQMGKLM-----TECWAHNPAS  315 (337)
T ss_dssp             -----BCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGG--------GSHHHHHHHHHH-----HHHSCSSGGG
T ss_pred             -----ccccccccHhhhcCCCCchhhhHHHHhhhccCccccccch--------hhHHHHHHHHHH-----HHhhhhChhh
Confidence                 000011122111     1111111111 111222222210        011224456677     9999999999


Q ss_pred             CCChhhhhcC
Q psy7309         222 RPSSEQNLCQ  231 (454)
Q Consensus       222 Rpta~e~l~h  231 (454)
                      |||+.|+++|
T Consensus       316 Rps~~ell~~  325 (337)
T 3mdy_A          316 RLTALRVKKT  325 (337)
T ss_dssp             SCCHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            9999998874


No 233
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.90  E-value=1.8e-25  Score=224.50  Aligned_cols=106  Identities=18%  Similarity=0.223  Sum_probs=85.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEc--cCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFID--YEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~--~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++  .++.+||+|||+|+.+.......                  ..
T Consensus       152 ~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~------------------~~  213 (364)
T 3op5_A          152 KTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHK------------------AY  213 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCC------------------CS
T ss_pred             HHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCccc------------------cc
Confidence            46889999999999999999999999999999999  88999999999998653211100                  01


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP  144 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~  144 (454)
                      ........+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|+.
T Consensus       214 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~g~~  259 (364)
T 3op5_A          214 AADPKRCHDGTIEFTSIDAHN---GVAPSRRG--DLEIL--------------GYCMIQWLTGHL  259 (364)
T ss_dssp             SCCSSCCCCCCTTTCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSCC
T ss_pred             ccCcccccCCCCCccCHHHhC---CCCCCchh--hHHHH--------------HHHHHHHHhCCC
Confidence            122334567999999999998   66788888  99999              999999776654


No 234
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.90  E-value=2.3e-25  Score=219.55  Aligned_cols=173  Identities=22%  Similarity=0.243  Sum_probs=113.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHc---CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ---GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~---giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.|++.||+|||++   ||+||||||+|||++.++.+||+|||++.....                        
T Consensus       131 ~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------------------------  186 (326)
T 3uim_A          131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY------------------------  186 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCS------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCc------------------------
Confidence            36789999999999999999   999999999999999999999999999975421                        


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhh-HHHHHHHhhhc
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKT-LEELKHNIRRE  157 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~-~~~l~~~i~~~  157 (454)
                      ..........||+.|+|||++.   +..++.++  ||||+              |+++|+|++|+.+. ....    .  
T Consensus       187 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~pf~~~~~----~--  241 (326)
T 3uim_A          187 KDTHVTTAVRGTIGHIAPEYLS---TGKSSEKT--DVFGY--------------GVMLLELITGQRAFDLARL----A--  241 (326)
T ss_dssp             SSSCEECCCCSCGGGCCHHHHH---HSEECHHH--HHHHH--------------HHHHHHHHHCCCSBCHHHH----T--
T ss_pred             ccccccccccCCcCccCHHHhc---cCCCCccc--cchhH--------------HHHHHHHHhCCCccccccc----c--
Confidence            1122234456999999999997   66788888  99999              99999977655422 1111    0  


Q ss_pred             CCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcc
Q psy7309         158 NGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPI  233 (454)
Q Consensus       158 ~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~  233 (454)
                        ....................  ..... ..............+.+++     .+||+.||.+|||++|+++|-.
T Consensus       242 --~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~li-----~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          242 --NDDDVMLLDWVKGLLKEKKL--EALVD-VDLQGNYKDEEVEQLIQVA-----LLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             --TTSCSBHHHHHTTTTSSCCS--TTSSC-TTCTTSCCHHHHHHHHHHH-----HHHTCSCGGGSCCHHHHHHHHH
T ss_pred             --cccchhHHHHHHHHhhchhh--hhhcC-hhhccccCHHHHHHHHHHH-----HHHhCcCCccCCCHHHHHHHhc
Confidence              00001111111111111100  00000 0000000011124455555     9999999999999999998754


No 235
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.90  E-value=1.4e-24  Score=209.95  Aligned_cols=151  Identities=25%  Similarity=0.352  Sum_probs=109.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEccCCC-----eEEecccchhhhhhhcCCCccccccCccCCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDYEDH-----VKIGDFGLATNILQKHAGPLARELTGYILPPIDS   74 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~~~~-----vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~   74 (454)
                      ..++.++.|++.||+|||++|  |+||||||+|||++.++.     +||+|||+++...                     
T Consensus       122 ~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~---------------------  180 (287)
T 4f0f_A          122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV---------------------  180 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCS---------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccc---------------------
Confidence            467899999999999999999  999999999999988776     9999999987321                     


Q ss_pred             CCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHh
Q psy7309          75 TAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNI  154 (454)
Q Consensus        75 ~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i  154 (454)
                             .......||+.|+|||++.. ....++.++  ||||+              ||++|+|++|+.          
T Consensus       181 -------~~~~~~~g~~~y~aPE~~~~-~~~~~~~~~--Di~sl--------------G~~l~~l~~g~~----------  226 (287)
T 4f0f_A          181 -------HSVSGLLGNFQWMAPETIGA-EEESYTEKA--DTYSF--------------AMILYTILTGEG----------  226 (287)
T ss_dssp             -------SCEECCCCCCTTSCGGGSSC-SSCEECHHH--HHHHH--------------HHHHHHHHHSSC----------
T ss_pred             -------ccccccCCCccccCchhhcc-CCCCcCchh--hHHHH--------------HHHHHHHHcCCC----------
Confidence                   12344689999999999842 145677788  99999              999999776553          


Q ss_pred             hhcCCCCCCchhhh--hhhh-hccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         155 RRENGPSTGSNVQK--SLQK-FQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       155 ~~~~~p~~~~~~~~--~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                           |+.......  .... ........++..             .++...++|     .+||+.||.+|||++|+++
T Consensus       227 -----pf~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          227 -----PFDEYSYGKIKFINMIREEGLRPTIPED-------------CPPRLRNVI-----ELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             -----TTTTCCCCHHHHHHHHHHSCCCCCCCTT-------------SCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             -----CCccccccHHHHHHHHhccCCCCCCCcc-------------cCHHHHHHH-----HHHhcCChhhCcCHHHHHH
Confidence                 222111110  0111 111222223332             236677888     9999999999999998875


No 236
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.90  E-value=5.3e-25  Score=216.84  Aligned_cols=101  Identities=29%  Similarity=0.361  Sum_probs=84.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       139 ~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  195 (321)
T 2qkw_B          139 EQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL-----------------------DQT  195 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSS-----------------------SCC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccc-----------------------ccc
Confidence            467899999999999999999999999999999999999999999998753210                       112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP  144 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~  144 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|||++|+.
T Consensus       196 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ell~g~~  239 (321)
T 2qkw_B          196 HLSTVVKGTLGYIDPEYFI---KGRLTEKS--DVYSF--------------GVVLFEVLCARS  239 (321)
T ss_dssp             CCBCCCEEETTTCCHHHHH---HCBCCTHH--HHHHH--------------HHHHHHHHHCCT
T ss_pred             ccccccCCCccccCHHHhc---CCCCCccc--chHhH--------------HHHHHHHHhCCC
Confidence            2234567999999999987   66788888  99999              999999776653


No 237
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.90  E-value=2.3e-25  Score=218.21  Aligned_cols=168  Identities=23%  Similarity=0.295  Sum_probs=108.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++............          .. .......
T Consensus       108 ~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~----------~~-~~~~~~~  176 (310)
T 3s95_A          108 SQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG----------LR-SLKKPDR  176 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccc----------cc-ccccccc
Confidence            467899999999999999999999999999999999999999999999855321110000          00 0000112


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      ......+||+.|+|||++.   +..++.++  ||||+              |+++||++++........         +.
T Consensus       177 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~el~~g~~~~~~~~---------~~  228 (310)
T 3s95_A          177 KKRYTVVGNPYWMAPEMIN---GRSYDEKV--DVFSF--------------GIVLCEIIGRVNADPDYL---------PR  228 (310)
T ss_dssp             ---CCCCSCGGGCCHHHHT---TCCCCTHH--HHHHH--------------HHHHHHHHHTCCSSTTTS---------CB
T ss_pred             ccccccCCCcceeCHHHhc---CCCCCcHH--HHHHH--------------HHHHHHHhcCCCCCcchh---------hh
Confidence            2334578999999999998   67788888  99999              999999766443110000         00


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      .............    ...+             ...++...+++     .+||+.||++|||++|+++
T Consensus       229 ~~~~~~~~~~~~~----~~~~-------------~~~~~~l~~li-----~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          229 TMDFGLNVRGFLD----RYCP-------------PNCPPSFFPIT-----VRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             CTTSSBCHHHHHH----HTCC-------------TTCCTTHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhhhhhcccc----ccCC-------------CCCCHHHHHHH-----HHHccCChhhCcCHHHHHH
Confidence            0000000000000    0011             11235667888     9999999999999998876


No 238
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.90  E-value=5e-25  Score=217.80  Aligned_cols=154  Identities=22%  Similarity=0.346  Sum_probs=111.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......                       ...
T Consensus       164 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  220 (333)
T 2i1m_A          164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-----------------------SNY  220 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGC-----------------------TTS
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccc-----------------------cce
Confidence            357889999999999999999999999999999999999999999999855321                       111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|||++ |.+               |
T Consensus       221 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~t~g~~---------------p  266 (333)
T 2i1m_A          221 IVKGNARLPVKWMAPESIF---DCVYTVQS--DVWSY--------------GILLWEIFSLGLN---------------P  266 (333)
T ss_dssp             EECSSCEECGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHTTTSCC---------------S
T ss_pred             eecCCCCCCccccCHHHhc---cCCCChHH--HHHHH--------------HHHHHHHHcCCCC---------------C
Confidence            1233457789999999987   66788888  99999              999999876 443               2


Q ss_pred             CCCchhhhhhhh-hccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQK-FQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+......... .........+..             .++...+++     .+||+.||.+|||++|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          267 YPGILVNSKFYKLVKDGYQMAQPAF-------------APKNIYSIM-----QACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             STTCCSSHHHHHHHHHTCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CcccchhHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHhccChhhCcCHHHHHH
Confidence            222211111111 111112222222             125566777     9999999999999998876


No 239
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.90  E-value=9.4e-25  Score=209.19  Aligned_cols=151  Identities=28%  Similarity=0.330  Sum_probs=106.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcC---CcccCCCCCcEEEcc--------CCCeEEecccchhhhhhhcCCCccccccCccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQG---IIHRDLKPVNIFIDY--------EDHVKIGDFGLATNILQKHAGPLARELTGYILP   70 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~g---iiHrDLKp~NILl~~--------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~   70 (454)
                      ..++.++.|++.||.|||++|   |+||||||+|||++.        ++.+||+|||++.....                
T Consensus       105 ~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~----------------  168 (271)
T 3dtc_A          105 DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR----------------  168 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccc----------------
Confidence            468899999999999999999   999999999999986        67899999999985432                


Q ss_pred             CCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHH
Q psy7309          71 PIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEEL  150 (454)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l  150 (454)
                                 .......||+.|+|||++.   +..++.++  ||||+              |++++++++++.      
T Consensus       169 -----------~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~~l~~l~~g~~------  212 (271)
T 3dtc_A          169 -----------TTKMSAAGAYAWMAPEVIR---ASMFSKGS--DVWSY--------------GVLLWELLTGEV------  212 (271)
T ss_dssp             ------------------CCGGGSCHHHHH---HCCCSHHH--HHHHH--------------HHHHHHHHHCCC------
T ss_pred             -----------ccccCCCCccceeCHHHhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCC------
Confidence                       1122457899999999987   66788888  99999              999999766543      


Q ss_pred             HHHhhhcCCCCCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh
Q psy7309         151 KHNIRRENGPSTGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL  229 (454)
Q Consensus       151 ~~~i~~~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l  229 (454)
                               |+.+........... .......+..             .++...+++     .+||+.||.+|||++|++
T Consensus       213 ---------p~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~e~l  265 (271)
T 3dtc_A          213 ---------PFRGIDGLAVAYGVAMNKLALPIPST-------------CPEPFAKLM-----EDCWNPDPHSRPSFTNIL  265 (271)
T ss_dssp             ---------TTTTSCHHHHHHHHHTSCCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHH
T ss_pred             ---------CCCCCCHHHHHHhhhcCCCCCCCCcc-------------cCHHHHHHH-----HHHhcCCcccCcCHHHHH
Confidence                     232222222222221 1112222222             226667788     999999999999999988


Q ss_pred             cC
Q psy7309         230 CQ  231 (454)
Q Consensus       230 ~h  231 (454)
                      +|
T Consensus       266 ~~  267 (271)
T 3dtc_A          266 DQ  267 (271)
T ss_dssp             HH
T ss_pred             HH
Confidence            64


No 240
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.90  E-value=6.8e-25  Score=216.97  Aligned_cols=109  Identities=25%  Similarity=0.387  Sum_probs=82.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHc---------CCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQ---------GIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPI   72 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~---------giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~   72 (454)
                      ..+++++.||+.||+|||++         ||+||||||+|||++.++.+||+|||+|+.........             
T Consensus       111 ~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~-------------  177 (336)
T 3g2f_A          111 VSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR-------------  177 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC--------------
T ss_pred             hHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccC-------------
Confidence            35789999999999999999         99999999999999999999999999998553210000             


Q ss_pred             CCCCcccCCCCCcCcccccceeccccccccc----cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCc
Q psy7309          73 DSTAFYSHDTSHTGQVGTALYAAPELDSHGV----KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDR  143 (454)
Q Consensus        73 ~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~----~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~  143 (454)
                          ...........+||+.|+|||++....    ...++.++  ||||+              ||++|||+++.
T Consensus       178 ----~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~--Diwsl--------------G~il~ell~g~  232 (336)
T 3g2f_A          178 ----PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV--DMYAL--------------GLIYWEIFMRC  232 (336)
T ss_dssp             ------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHH--HHHHH--------------HHHHHHHHTTB
T ss_pred             ----ccccccccccCCCccceeCchhhcCCccccccccccccc--chHHH--------------HHHHHHHHhcC
Confidence                001122334568999999999987210    14667778  99999              99999977654


No 241
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.90  E-value=7.3e-25  Score=217.33  Aligned_cols=148  Identities=14%  Similarity=0.045  Sum_probs=105.4

Q ss_pred             hhHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEccCC--------------------CeEEecccchhhhhhhcCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIH-SQGIIHRDLKPVNIFIDYED--------------------HVKIGDFGLATNILQKHAGPL   60 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH-~~giiHrDLKp~NILl~~~~--------------------~vKL~DFGla~~~~~~~~~~~   60 (454)
                      ..++.+++||+.||+||| ++||+||||||+|||++.++                    .+||+|||+|+....      
T Consensus       161 ~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------  234 (336)
T 2vuw_A          161 ATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------  234 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------
Confidence            468999999999999999 99999999999999999887                    899999999985421      


Q ss_pred             cccccCccCCCCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhccee-eeee
Q psy7309          61 ARELTGYILPPIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYL-KAEV  139 (454)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~i-l~el  139 (454)
                                              ...+||+.|+|||++.   +.. +.++  ||||+              |++ .+++
T Consensus       235 ------------------------~~~~gt~~y~aPE~~~---g~~-~~~~--Diwsl--------------~~~~~~~~  270 (336)
T 2vuw_A          235 ------------------------GIVVFCDVSMDEDLFT---GDG-DYQF--DIYRL--------------MKKENNNR  270 (336)
T ss_dssp             ------------------------TEEECCCCTTCSGGGC---CCS-SHHH--HHHHH--------------HHHHHTTC
T ss_pred             ------------------------CcEEEeecccChhhhc---CCC-ccce--ehhhh--------------hCCCCccc
Confidence                                    1348999999999997   333 6677  99998              666 5557


Q ss_pred             cCCchhhHHH-----HHHHhhhcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhh
Q psy7309         140 YKDRPKTLEE-----LKHNIRRENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWC  214 (454)
Q Consensus       140 ~~~~~~~~~~-----l~~~i~~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~  214 (454)
                      +++..+....     +...+.               .... ......+..     |     ...++++.+||     ++|
T Consensus       271 ~~g~~p~~~~~~~~~~~~~~~---------------~~~~-~~~~~~~~~-----~-----~~~s~~~~dli-----~~~  319 (336)
T 2vuw_A          271 WGEYHPYSNVLWLHYLTDKML---------------KQMT-FKTKCNTPA-----M-----KQIKRKIQEFH-----RTM  319 (336)
T ss_dssp             TTSCCTHHHHHHHHHHHHHHH---------------HTCC-CSSCCCSHH-----H-----HHHHHHHHHHH-----HHG
T ss_pred             ccccCCCcchhhhhHHHHhhh---------------hhhc-cCcccchhh-----h-----hhcCHHHHHHH-----HHH
Confidence            7665533221     111111               0000 000000100     1     11236677888     999


Q ss_pred             cCCCCCCCCChhhhh-cCcccc
Q psy7309         215 LNHDPSKRPSSEQNL-CQPISL  235 (454)
Q Consensus       215 L~~dP~~Rpta~e~l-~hp~f~  235 (454)
                      |++|     ||+|+| +||||+
T Consensus       320 L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          320 LNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             GGSS-----SHHHHHHHCGGGC
T ss_pred             hccC-----CHHHHHhcCCCcC
Confidence            9987     999999 999995


No 242
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.90  E-value=1.2e-24  Score=233.53  Aligned_cols=160  Identities=16%  Similarity=0.135  Sum_probs=117.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+......                      ...
T Consensus       436 ~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~----------------------~~~  493 (613)
T 2ozo_A          436 SNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD----------------------SYY  493 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC----------------------cee
Confidence            4688999999999999999999999999999999999999999999998543210                      111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|+.|+|||++.   +..|+.++  ||||+              ||++|||++ |+.               |
T Consensus       494 ~~~~~~~~~~~y~APE~~~---~~~~~~~s--DvwSl--------------Gv~l~ellt~G~~---------------P  539 (613)
T 2ozo_A          494 TARSAGKWPLKWYAPECIN---FRKFSSRS--DVWSY--------------GVTMWEALSYGQK---------------P  539 (613)
T ss_dssp             --------CCTTSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             eeccCCCCccceeCHhhhc---CCCCCcHH--HHHHH--------------HHHHHHHHHCCCC---------------C
Confidence            1223345678999999997   67888888  99999              999999775 543               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhh---cCcccc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNL---CQPISL  235 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l---~hp~f~  235 (454)
                      +.+.........+........|...             ++...++|     .+||+.||++|||+++++   ++.|+.
T Consensus       540 f~~~~~~~~~~~i~~~~~~~~p~~~-------------~~~l~~li-----~~cl~~dP~~RPs~~~l~~~L~~~~~~  599 (613)
T 2ozo_A          540 YKKMKGPEVMAFIEQGKRMECPPEC-------------PPELYALM-----SDCWIYKWEDRPDFLTVEQRMRACYYS  599 (613)
T ss_dssp             TTTCCSHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCcC-------------CHHHHHHH-----HHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            4444444555555545444444432             26677888     999999999999999875   444444


No 243
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.90  E-value=4.6e-25  Score=219.81  Aligned_cols=169  Identities=14%  Similarity=0.188  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC--CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED--HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~--~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.+.......                  ..
T Consensus       151 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~------------------~~  212 (345)
T 2v62_A          151 STVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHK------------------QY  212 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCC------------------CC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccc------------------cc
Confidence            46899999999999999999999999999999999887  99999999998653211000                  01


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      .........||+.|+|||++.   +..++.++  ||||+              ||++|||++|+.+.....         
T Consensus       213 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~ell~g~~pf~~~~---------  264 (345)
T 2v62_A          213 QENPRKGHNGTIEFTSLDAHK---GVALSRRS--DVEIL--------------GYCMLRWLCGKLPWEQNL---------  264 (345)
T ss_dssp             CCCGGGCSCSCTTTCCHHHHH---TCCCCHHH--HHHHH--------------HHHHHHHHHSSCTTGGGT---------
T ss_pred             hhccccccCCCccccCHHHhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCCCccccc---------
Confidence            112235568999999999988   56788888  99999              999999776554221000         


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                       ............+.    ..++....  .|  ......++...++|     .+||+.||++|||++++++
T Consensus       265 -~~~~~~~~~~~~~~----~~~~~~~~--~~--~~~~~~~~~l~~li-----~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          265 -KDPVAVQTAKTNLL----DELPQSVL--KW--APSGSSCCEIAQFL-----VCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             -TCHHHHHHHHHHHH----HTTTHHHH--HH--SCTTSCCHHHHHHH-----HHHHTCCTTCCCCHHHHHH
T ss_pred             -cccHHHHHHHHhhc----ccccHHHH--hh--ccccccHHHHHHHH-----HHHhhcCcccCCCHHHHHH
Confidence             00000000000110    01111100  00  00012236677888     9999999999999999986


No 244
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.89  E-value=2.1e-25  Score=216.88  Aligned_cols=174  Identities=18%  Similarity=0.178  Sum_probs=99.8

Q ss_pred             hhHHHHHHHHHHHHHHHH--------HcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIH--------SQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPID   73 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH--------~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~   73 (454)
                      ..+++++.|++.||+|||        ++||+||||||+|||++.++.+||+|||+|........                
T Consensus       100 ~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~~~~----------------  163 (303)
T 3gxj_A          100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD----------------  163 (303)
T ss_dssp             -CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEETTTT----------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccCCCc----------------
Confidence            467899999999999999        99999999999999999999999999999975432100                


Q ss_pred             CCCcccCCCCCcCcccccceecccccccccc---ccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHH
Q psy7309          74 STAFYSHDTSHTGQVGTALYAAPELDSHGVK---AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEEL  150 (454)
Q Consensus        74 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~---~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l  150 (454)
                           .........+||+.|+|||++.....   ..++.++  ||||+              |+++|||+++.+....  
T Consensus       164 -----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~--Diwsl--------------G~il~el~~g~~~~~~--  220 (303)
T 3gxj_A          164 -----TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA--DIYAM--------------GLVFWEIARRCSIGGI--  220 (303)
T ss_dssp             -----EESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHH--HHHC---------------CCCC-CTGGGBCBTTB--
T ss_pred             -----ccccccCCCCcCccccCHhhhcCcccccccccCcch--hHHHH--------------HHHHHHHHhcCCCccc--
Confidence                 11122344589999999999872211   1455667  99999              9999998876321000  


Q ss_pred             HHHhhhcCCCCCCc-----hhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC
Q psy7309         151 KHNIRRENGPSTGS-----NVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS  224 (454)
Q Consensus       151 ~~~i~~~~~p~~~~-----~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt  224 (454)
                         ......|+...     ........+. ....+.++....        .........+++     ++||+.||++|||
T Consensus       221 ---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~li-----~~cl~~dP~~Rps  284 (303)
T 3gxj_A          221 ---HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ--------SCEALRVMAKIM-----RECWYANGAARLT  284 (303)
T ss_dssp             ---C-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGG--------SSHHHHHHHHHH-----HTTCCSSGGGSCC
T ss_pred             ---cceeeccccccCCCCccHHHHHHHHHHhhcCCCcccccc--------chhhHHHHHHHH-----HHHhccCcccCCC
Confidence               00011122111     1111111111 111222222110        011113455666     9999999999999


Q ss_pred             hhhhhc
Q psy7309         225 SEQNLC  230 (454)
Q Consensus       225 a~e~l~  230 (454)
                      ++|+++
T Consensus       285 ~~~i~~  290 (303)
T 3gxj_A          285 ALRIKK  290 (303)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            998886


No 245
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.89  E-value=3.2e-24  Score=210.35  Aligned_cols=155  Identities=23%  Similarity=0.285  Sum_probs=101.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....                        ...
T Consensus       134 ~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~------------------------~~~  189 (309)
T 2h34_A          134 PRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTD------------------------EKL  189 (309)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC---------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccc------------------------ccc
Confidence            46889999999999999999999999999999999999999999999975432                        111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++++.               |+
T Consensus       190 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~g~~---------------pf  235 (309)
T 2h34_A          190 TQLGNTVGTLYYMAPERFS---ESHATYRA--DIYAL--------------TCVLYECLTGSP---------------PY  235 (309)
T ss_dssp             -------CCGGGCCGGGTC---C----CCC--HHHHH--------------HHHHHHHHHSSC---------------SS
T ss_pred             ccccccCCCcCccCHHHHc---CCCCCchH--hHHHH--------------HHHHHHHHHCCC---------------CC
Confidence            2234567999999999998   67788888  99999              999999776543               22


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCC-Chhhhhc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRP-SSEQNLC  230 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rp-ta~e~l~  230 (454)
                      ...........+... ........          ...++...++|     .+||+.||++|| |+++++.
T Consensus       236 ~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~l~~li-----~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          236 QGDQLSVMGAHINQA-IPRPSTVR----------PGIPVAFDAVI-----ARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             CSCHHHHHHHHHHSC-CCCGGGTS----------TTCCTHHHHHH-----HHHTCSSGGGSCSSHHHHHH
T ss_pred             CCchHHHHHHHhccC-CCCccccC----------CCCCHHHHHHH-----HHhccCCHHHHHHhHHHHHH
Confidence            222222111112111 11111110          11236677888     999999999999 7776664


No 246
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.89  E-value=1.4e-24  Score=212.92  Aligned_cols=149  Identities=28%  Similarity=0.368  Sum_probs=105.0

Q ss_pred             hhHHHHHHHHHHHHHHHHH---cCCcccCCCCCcEEEccCCC-eEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHS---QGIIHRDLKPVNIFIDYEDH-VKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~---~giiHrDLKp~NILl~~~~~-vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      ..++.++.|++.||+|||+   +||+||||||+|||++.++. +||+|||++.....                       
T Consensus       102 ~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~-----------------------  158 (307)
T 2eva_A          102 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT-----------------------  158 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc-----------------------
Confidence            3578899999999999999   89999999999999998887 79999999975421                       


Q ss_pred             ccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhc
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRE  157 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~  157 (454)
                           ......||+.|+|||++.   +..++.++  ||||+              |+++|||++|+.+            
T Consensus       159 -----~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~g~~p------------  202 (307)
T 2eva_A          159 -----HMTNNKGSAAWMAPEVFE---GSNYSEKC--DVFSW--------------GIILWEVITRRKP------------  202 (307)
T ss_dssp             -----------CCTTSSCHHHHT---CCCCCTHH--HHHHH--------------HHHHHHHHHTCCT------------
T ss_pred             -----ccccCCCCCceEChhhhC---CCCCCcHH--HHHHH--------------HHHHHHHHHCCCC------------
Confidence                 123346899999999998   66788888  99999              9999997765532            


Q ss_pred             CCCCCCc--hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         158 NGPSTGS--NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       158 ~~p~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                         +...  .................+..             .++...+++     .+||+.||++|||++|+++
T Consensus       203 ---~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          203 ---FDEIGGPAFRIMWAVHNGTRPPLIKN-------------LPKPIESLM-----TRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             ---TTTTCSSHHHHHHHHHTTCCCCCBTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             ---chhhCccHHHHHHHHhcCCCCCcccc-------------cCHHHHHHH-----HHHhcCChhhCcCHHHHHH
Confidence               1111  11111112222222222222             125667788     9999999999999999987


No 247
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.89  E-value=1e-24  Score=230.34  Aligned_cols=153  Identities=23%  Similarity=0.307  Sum_probs=116.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....                        ..
T Consensus       363 ~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~------------------------~~  418 (535)
T 2h8h_A          363 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN------------------------EY  418 (535)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH------------------------HH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC------------------------ce
Confidence            467899999999999999999999999999999999999999999999854211                        01


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......+|..|+|||++.   ...|+.++  ||||+              ||++|||++ |+.               |
T Consensus       419 ~~~~~~~~~~~y~aPE~~~---~~~~~~~s--DvwSl--------------Gv~l~el~t~g~~---------------P  464 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAAL---YGRFTIKS--DVWSF--------------GILLTELTTKGRV---------------P  464 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHTTTTCC---------------S
T ss_pred             ecccCCcCcccccCHHHhc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1123345788999999988   66788888  99999              999999876 443               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+......+..+........+...             .+.+.++|     .+||+.||++|||+++++.
T Consensus       465 ~~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~l~~li-----~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          465 YPGMVNREVLDQVERGYRMPCPPEC-------------PESLHDLM-----CQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             STTCCHHHHHHHHHTTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCCCC-------------CHHHHHHH-----HHHcCCChhHCcCHHHHHH
Confidence            4444444444444434333333332             25667788     9999999999999999886


No 248
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.89  E-value=8.1e-25  Score=211.66  Aligned_cols=155  Identities=25%  Similarity=0.319  Sum_probs=111.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++.......                      ...
T Consensus       121 ~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------~~~  178 (291)
T 1u46_A          121 GTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND----------------------DHY  178 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C----------------------CEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccc----------------------cch
Confidence            4678999999999999999999999999999999999999999999987542110                      001


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||..|+|||++.   +..++.++  ||||+              |+++|++++ ++.               |
T Consensus       179 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~~l~~~g~~---------------p  224 (291)
T 1u46_A          179 VMQEHRKVPFAWCAPESLK---TRTFSHAS--DTWMF--------------GVTLWEMFTYGQE---------------P  224 (291)
T ss_dssp             EC-----CCGGGCCHHHHH---HCEEEHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             hhhccCCCCceeeCchhhc---CCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1223456788999999987   66788888  99999              999999776 543               3


Q ss_pred             CCCchhhhhhhhhccCC-CCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSP-PSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +...........+.... ....+..             .++...+++     .+||..||.+|||+.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          225 WIGLNGSQILHKIDKEGERLPRPED-------------CPQDIYNVM-----VQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             TTTCCHHHHHHHHHTSCCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHccCCCCCCCcC-------------cCHHHHHHH-----HHHccCCcccCcCHHHHHH
Confidence            33333333333332221 1111111             236677888     9999999999999999886


No 249
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.89  E-value=2.2e-24  Score=215.36  Aligned_cols=169  Identities=17%  Similarity=0.192  Sum_probs=113.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCC--CeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYED--HVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~--~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++  .+||+|||+|+.........                  ..
T Consensus       159 ~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~------------------~~  220 (352)
T 2jii_A          159 RSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHV------------------AY  220 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCC------------------CC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccc------------------cc
Confidence            46889999999999999999999999999999999988  89999999998653211000                  01


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                      .........||+.|+|||++.   +..++.++  ||||+              |+++|||++|+.+.....         
T Consensus       221 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~~g~~pf~~~~---------  272 (352)
T 2jii_A          221 VEGSRSPHEGDLEFISMDLHK---GCGPSRRS--DLQSL--------------GYCMLKWLYGFLPWTNCL---------  272 (352)
T ss_dssp             CTTSSCTTCSCTTTCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSCCTTGGGT---------
T ss_pred             cccccccccCCccccCHHHHc---cCCCCchh--hHHHH--------------HHHHHHHHhCCCCcccCC---------
Confidence            112334568999999999988   56788888  99999              999999776553111000         


Q ss_pred             CCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         160 PSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       160 p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                       ............+. .....++...  ..|     ...++...+++     .+||+.||++|||++++++
T Consensus       273 -~~~~~~~~~~~~~~-~~~~~~~~~~--~~~-----~~~~~~l~~li-----~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          273 -PNTEDIMKQKQKFV-DKPGPFVGPC--GHW-----IRPSETLQKYL-----KVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             -TCHHHHHHHHHHHH-HSCCCEECTT--SCE-----ECCCHHHHHHH-----HHHHTCCTTCCCCHHHHHH
T ss_pred             -cCHHHHHHHHHhcc-CChhhhhhhc--ccc-----CCCcHHHHHHH-----HHHHhCChhhCCCHHHHHH
Confidence             00000011111111 1111111111  011     11236677888     9999999999999998875


No 250
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.89  E-value=1.3e-24  Score=214.58  Aligned_cols=170  Identities=20%  Similarity=0.269  Sum_probs=115.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......                      ...
T Consensus       145 ~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~----------------------~~~  202 (326)
T 2w1i_A          145 IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK----------------------EYY  202 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC----------------------SEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccc----------------------ccc
Confidence            3578999999999999999999999999999999999999999999997543110                      000


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......+|..|+|||++.   +..++.++  ||||+              |+++|||+++...................
T Consensus       203 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Di~sl--------------G~il~el~tg~~~~~~~~~~~~~~~~~~~  263 (326)
T 2w1i_A          203 KVKEPGESPIFWYAPESLT---ESKFSVAS--DVWSF--------------GVVLYELFTYIEKSKSPPAEFMRMIGNDK  263 (326)
T ss_dssp             ECSSCCSCCGGGCCHHHHH---HCEEEHHH--HHHHH--------------HHHHHHHHHTTCGGGSHHHHHHHHHCTTC
T ss_pred             ccccCCCCceeEECchhhc---CCCCCchh--hHHHH--------------HHHHHHHHhcCCCCCCCHHHHHHhhcccc
Confidence            1123456788899999987   66788888  99999              99999987765422211111111111111


Q ss_pred             CCch-hhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         162 TGSN-VQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       162 ~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      .... .......+........+..             .++...++|     ++||+.||++|||+.|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~l~~li-----~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          264 QGQMIVFHLIELLKNNGRLPRPDG-------------CPDEIYMIM-----TECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CTHHHHHHHHHHHHTTCCCCCCTT-------------CCHHHHHHH-----HHHSCSSGGGSCCHHHHHH
T ss_pred             chhhhHHHHHHHhhcCCCCCCCCc-------------ccHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence            1111 1122223332333323322             226667788     9999999999999998775


No 251
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.89  E-value=1.9e-24  Score=233.48  Aligned_cols=153  Identities=19%  Similarity=0.237  Sum_probs=113.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....                        ...
T Consensus       491 ~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~------------------------~~~  546 (656)
T 2j0j_A          491 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED------------------------STY  546 (656)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCC------------------------Ccc
Confidence            35788999999999999999999999999999999999999999999975421                        111


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecC-CchhhHHHHHHHhhhcCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYK-DRPKTLEELKHNIRRENGP  160 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~-~~~~~~~~l~~~i~~~~~p  160 (454)
                      .......||+.|+|||++.   +..|+.++  ||||+              |+++|||++ |.+               |
T Consensus       547 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~--DiwSl--------------G~il~ellt~g~~---------------P  592 (656)
T 2j0j_A          547 YKASKGKLPIKWMAPESIN---FRRFTSAS--DVWMF--------------GVCMWEILMHGVK---------------P  592 (656)
T ss_dssp             -------CCGGGCCHHHHH---HCCCCHHH--HHHHH--------------HHHHHHHHTTSCC---------------T
T ss_pred             eeccCCCCCcceeCHHHhc---CCCCCchh--hHHHH--------------HHHHHHHHHcCCC---------------C
Confidence            1223456788999999997   66788888  99999              999999764 432               4


Q ss_pred             CCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         161 STGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      +.+.........+.......+|...             ++...++|     .+||+.||++|||+.|+++
T Consensus       593 f~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~l~~li-----~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          593 FQGVKNNDVIGRIENGERLPMPPNC-------------PPTLYSLM-----TKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             TTTCCHHHHHHHHHHTCCCCCCTTC-------------CHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCCCCCccc-------------cHHHHHHH-----HHHcCCChhHCcCHHHHHH
Confidence            4444444444444444444444432             26667788     9999999999999998875


No 252
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.89  E-value=6e-24  Score=208.48  Aligned_cols=160  Identities=21%  Similarity=0.285  Sum_probs=110.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++ ++.+||+|||++........                    ....
T Consensus       130 ~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~--------------------~~~~  188 (319)
T 2y4i_B          130 NKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA--------------------GRRE  188 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC------------------------------C
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccc--------------------cccc
Confidence            46899999999999999999999999999999998 78999999999875421100                    0112


Q ss_pred             CCCcCcccccceeccccccccc------cccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhh
Q psy7309          82 TSHTGQVGTALYAAPELDSHGV------KAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIR  155 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~------~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~  155 (454)
                      .......||+.|+|||++....      ...|+.++  ||||+              |+++|||++++.           
T Consensus       189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~--Di~sl--------------G~il~el~~g~~-----------  241 (319)
T 2y4i_B          189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHS--DVFAL--------------GTIWYELHAREW-----------  241 (319)
T ss_dssp             CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHH--HHHHH--------------HHHHHHHHHSSC-----------
T ss_pred             cccccCCCcccccChHHhhhccccccccccCCCchh--hHHHH--------------HHHHHHHHhCCC-----------
Confidence            2344567999999999986211      23567777  99999              999999766543           


Q ss_pred             hcCCCCCCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         156 RENGPSTGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       156 ~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                          |+...........+........+..            ..+....+++     .+||..||.+|||++++++
T Consensus       242 ----p~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~li-----~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          242 ----PFKTQPAEAIIWQMGTGMKPNLSQI------------GMGKEISDIL-----LFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ----SSSSCCHHHHHHHHHTTCCCCCCCS------------SCCTTHHHHH-----HHHHCSSTTTSCCHHHHHH
T ss_pred             ----CCCCCCHHHHHHHhccCCCCCCCcC------------CCCHHHHHHH-----HHHhcCChhhCcCHHHHHH
Confidence                3333333333333332222222111            1225677888     9999999999999999886


No 253
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.89  E-value=3.8e-24  Score=204.37  Aligned_cols=150  Identities=18%  Similarity=0.225  Sum_probs=109.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHcC--CcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCccc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQG--IIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYS   79 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~g--iiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (454)
                      ..++.++.||+.||+|||++|  |+||||||+|||++.++.++|+|||++...                           
T Consensus       111 ~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~---------------------------  163 (271)
T 3kmu_A          111 SQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF---------------------------  163 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeee---------------------------
Confidence            468899999999999999999  999999999999999999999999886532                           


Q ss_pred             CCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCC
Q psy7309          80 HDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENG  159 (454)
Q Consensus        80 ~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~  159 (454)
                         ......||+.|+|||++.......++.++  ||||+              |+++||+++|+.               
T Consensus       164 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~--Di~sl--------------G~il~el~~g~~---------------  209 (271)
T 3kmu_A          164 ---QSPGRMYAPAWVAPEALQKKPEDTNRRSA--DMWSF--------------AVLLWELVTREV---------------  209 (271)
T ss_dssp             ---SCTTCBSCGGGSCHHHHHSCGGGSCHHHH--HHHHH--------------HHHHHHHHHCSC---------------
T ss_pred             ---cccCccCCccccChhhhccCCCCCCCchh--hHHHH--------------HHHHHHHHhCCC---------------
Confidence               12235789999999998732223333367  99999              999999776543               


Q ss_pred             CCCCchhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         160 PSTGSNVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       160 p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      |+............. ......++..             .++...+++     .+||+.||++|||++|+++
T Consensus       210 p~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~li-----~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          210 PFADLSNMEIGMKVALEGLRPTIPPG-------------ISPHVSKLM-----KICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCCCCCTT-------------CCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             CccccChHHHHHHHHhcCCCCCCCCC-------------CCHHHHHHH-----HHHcCCChhhCcCHHHHHH
Confidence            333322222222221 2223333333             226677888     9999999999999998875


No 254
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.89  E-value=4.6e-25  Score=229.96  Aligned_cols=183  Identities=17%  Similarity=0.162  Sum_probs=120.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE---ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI---DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl---~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.|+.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+........                  ..
T Consensus       103 ~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~------------------~~  164 (483)
T 3sv0_A          103 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH------------------QH  164 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC------------------CB
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc------------------cc
Confidence            4688999999999999999999999999999999   68889999999999865321100                  00


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                      .........+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|+.+             
T Consensus       165 ~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~s--DvwSl--------------Gvil~elltG~~P-------------  212 (483)
T 3sv0_A          165 IPYRENKNLTGTARYASVNTHL---GIEQSRRD--DLESL--------------GYVLMYFLRGSLP-------------  212 (483)
T ss_dssp             CCCCCCCCCCSCTTTCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSSCT-------------
T ss_pred             cccccccccCCCccccCHHHhc---CCCCChHH--HHHHH--------------HHHHHHHHhCCCC-------------
Confidence            1122344678999999999998   67788888  99999              9999997665431             


Q ss_pred             CCCCCch---hhhhhhhhccCCC-CCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc--Cc
Q psy7309         159 GPSTGSN---VQKSLQKFQKSPP-SVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC--QP  232 (454)
Q Consensus       159 ~p~~~~~---~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~--hp  232 (454)
                        +.+..   ....+..+..... .......          .....++.++|     .+||+.||.+||+++++++  ..
T Consensus       213 --f~~~~~~~~~~~~~~i~~~~~~~~~~~l~----------~~~p~~l~~li-----~~cl~~dP~~RPs~~el~~~L~~  275 (483)
T 3sv0_A          213 --WQGLKAGTKKQKYEKISEKKVATSIEALC----------RGYPTEFASYF-----HYCRSLRFDDKPDYSYLKRLFRD  275 (483)
T ss_dssp             --TSSCCCSSHHHHHHHHHHHHHHSCHHHHH----------TTSCHHHHHHH-----HHHHTCCTTCCCCHHHHHHHHHH
T ss_pred             --CccccchhHHHHHHHHhhccccccHHHHh----------cCCcHHHHHHH-----HHHhcCChhhCcCHHHHHHHHHH
Confidence              11110   0011111100000 0000000          11125667777     9999999999999998865  22


Q ss_pred             ccccCCCCCCCccCccccc
Q psy7309         233 ISLEGSSSGLSVLGSEQLL  251 (454)
Q Consensus       233 ~f~~~~~~~~~~~~~~~ll  251 (454)
                      .+..........++|+.+.
T Consensus       276 l~~~~~~~~~~~~dW~~~~  294 (483)
T 3sv0_A          276 LFIREGFQFDYVFDWTILK  294 (483)
T ss_dssp             HHHHTTCCCSSCCHHHHHT
T ss_pred             HHHHcCCCccCCcCchhhc
Confidence            3333333333456666443


No 255
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.88  E-value=6.3e-25  Score=220.42  Aligned_cols=101  Identities=19%  Similarity=0.233  Sum_probs=85.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc-----------CCCeEEecccchhhhhhhcCCCccccccCccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY-----------EDHVKIGDFGLATNILQKHAGPLARELTGYILP   70 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~-----------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~   70 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.           ++.+||+|||+|+.....               
T Consensus       172 ~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---------------  236 (365)
T 3e7e_A          172 GLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLF---------------  236 (365)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGS---------------
T ss_pred             HHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhcc---------------
Confidence            358999999999999999999999999999999998           899999999999754311               


Q ss_pred             CCCCCCcccCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309          71 PIDSTAFYSHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP  144 (454)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~  144 (454)
                              ......+..+||+.|+|||++.   +..|+.++  ||||+              ||++|||++|+.
T Consensus       237 --------~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~--Diwsl--------------G~il~elltg~~  283 (365)
T 3e7e_A          237 --------PKGTIFTAKCETSGFQCVEMLS---NKPWNYQI--DYFGV--------------AATVYCMLFGTY  283 (365)
T ss_dssp             --------CTTEEECCSSCTTSCCCHHHHT---TCCBSTHH--HHHHH--------------HHHHHHHHHSSC
T ss_pred             --------CCCceeeeecCCCCCCChHHhc---CCCCCccc--cHHHH--------------HHHHHHHHhCCC
Confidence                    1122345578999999999998   66789988  99999              999999877653


No 256
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.88  E-value=4.6e-24  Score=208.77  Aligned_cols=153  Identities=29%  Similarity=0.450  Sum_probs=102.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....                         ..
T Consensus       136 ~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~-------------------------~~  190 (310)
T 2wqm_A          136 RTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-------------------------KT  190 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-----------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC-------------------------CC
Confidence            35789999999999999999999999999999999999999999999875432                         11


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.   +..++.++  ||||+              |+++|++++++..               +
T Consensus       191 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~--Dv~sl--------------G~il~~l~~g~~p---------------~  236 (310)
T 2wqm_A          191 TAAHSLVGTPYYMSPERIH---ENGYNFKS--DIWSL--------------GCLLYEMAALQSP---------------F  236 (310)
T ss_dssp             --------CCSSCCHHHHT---TCCCCHHH--HHHHH--------------HHHHHHHHHSSCT---------------T
T ss_pred             ccccccCCCeeEeChHHhC---CCCCCchh--hHHHH--------------HHHHHHHHhCCCC---------------C
Confidence            1233457899999999987   56788888  99999              9999997765432               1


Q ss_pred             CCc--hhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhc
Q psy7309         162 TGS--NVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLC  230 (454)
Q Consensus       162 ~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~  230 (454)
                      .+.  ........+........+.            ...++...+++     .+||+.||++|||++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~l~~li-----~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          237 YGDKMNLYSLCKKIEQCDYPPLPS------------DHYSEELRQLV-----NMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             C---CCHHHHHHHHHTTCSCCCCT------------TTSCHHHHHHH-----HHHTCSSGGGSCCHHHHHH
T ss_pred             cccchhHHHHHHHhhcccCCCCcc------------cccCHHHHHHH-----HHHcCCChhhCCCHHHHHH
Confidence            111  1111222222222111111            11235677888     9999999999999998875


No 257
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.88  E-value=3.2e-24  Score=210.36  Aligned_cols=167  Identities=25%  Similarity=0.252  Sum_probs=111.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...........                .....
T Consensus       134 ~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~----------------~~~~~  197 (317)
T 2buj_A          134 DQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR----------------QALTL  197 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHH----------------HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccc----------------ccccc
Confidence            46889999999999999999999999999999999999999999998864321000000                00000


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                      .......||+.|+|||++.......++.++  ||||+              |+++|+|++|+.+.......         
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~--Di~sl--------------G~il~el~~g~~p~~~~~~~---------  252 (317)
T 2buj_A          198 QDWAAQRCTISYRAPELFSVQSHCVIDERT--DVWSL--------------GCVLYAMMFGEGPYDMVFQK---------  252 (317)
T ss_dssp             HHHHHHHSCGGGCCGGGSSCCSEEEECTHH--HHHHH--------------HHHHHHHHHSSCTTHHHHHT---------
T ss_pred             cccccccCCcccCCHhHhccCCCcCCCchh--hHHHH--------------HHHHHHHHhCCCChhhhhcc---------
Confidence            011235679999999998733334577888  99999              99999977765432211100         


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcC
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQ  231 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~h  231 (454)
                       ....   ...+..  ...++..           ...++...++|     .+||+.||.+|||++|++++
T Consensus       253 -~~~~---~~~~~~--~~~~~~~-----------~~~~~~l~~li-----~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          253 -GDSV---ALAVQN--QLSIPQS-----------PRHSSALWQLL-----NSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             -TSCH---HHHHHC--C--CCCC-----------TTSCHHHHHHH-----HHHTCSSGGGSCCHHHHHHH
T ss_pred             -cchh---hHHhhc--cCCCCcc-----------ccCCHHHHHHH-----HHHhhcChhhCCCHHHHHHH
Confidence             0000   011111  1111111           11235667788     99999999999999999975


No 258
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.88  E-value=6.6e-24  Score=206.97  Aligned_cols=143  Identities=22%  Similarity=0.343  Sum_probs=100.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEcc---CCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDY---EDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFY   78 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~---~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (454)
                      ..++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|||+|....                         
T Consensus       117 ~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~-------------------------  171 (299)
T 3m2w_A          117 REASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-------------------------  171 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc-------------------------
Confidence            468899999999999999999999999999999998   7889999999886321                         


Q ss_pred             cCCCCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcC
Q psy7309          79 SHDTSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRREN  158 (454)
Q Consensus        79 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~  158 (454)
                                               +..|+.++  ||||+              ||++|||++|+.              
T Consensus       172 -------------------------~~~~~~~~--Diwsl--------------G~il~el~tg~~--------------  196 (299)
T 3m2w_A          172 -------------------------GEKYDKSC--DMWSL--------------GVIMYILLCGYP--------------  196 (299)
T ss_dssp             -------------------------TCGGGGHH--HHHHH--------------HHHHHHHHHSSC--------------
T ss_pred             -------------------------cccCCchh--hHHHH--------------HHHHHHHHHCCC--------------
Confidence                                     13456677  99999              999999776554              


Q ss_pred             CCCCCchhhhhhhhhc---cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         159 GPSTGSNVQKSLQKFQ---KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       159 ~p~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                       |+.............   ......++..    .|     ...++...++|     .+||+.||.+|||++|+++||||.
T Consensus       197 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~li-----~~~l~~dP~~Rps~~e~l~hp~~~  261 (299)
T 3m2w_A          197 -PFYSNHGLAISPGMKTRIRMGQYEFPNP----EW-----SEVSEEVKMLI-----RNLLKTEPTQRMTITEFMNHPWIM  261 (299)
T ss_dssp             -SCCC-------CCSCCSSCTTCCSSCHH----HH-----TTSCHHHHHHH-----HHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             -CCCCCcchhhhHHHHHHHhhccccCCch----hc-----ccCCHHHHHHH-----HHHcccChhhCCCHHHHhcChhhc
Confidence             222211111110000   0111111110    01     12346777888     999999999999999999999998


Q ss_pred             cCCC
Q psy7309         236 EGSS  239 (454)
Q Consensus       236 ~~~~  239 (454)
                      ....
T Consensus       262 ~~~~  265 (299)
T 3m2w_A          262 QSTK  265 (299)
T ss_dssp             TGGG
T ss_pred             cccc
Confidence            6554


No 259
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.88  E-value=2.7e-24  Score=209.97  Aligned_cols=100  Identities=28%  Similarity=0.404  Sum_probs=81.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      ..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++......                       ...
T Consensus       133 ~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~-----------------------~~~  189 (307)
T 2nru_A          133 HMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKF-----------------------AQT  189 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSC-----------------------SSC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccc-----------------------ccc
Confidence            357899999999999999999999999999999999999999999998754210                       011


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP  144 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~  144 (454)
                      .......||+.|+|||++.    ..++.++  ||||+              |+++|+|++|.+
T Consensus       190 ~~~~~~~g~~~y~aPE~~~----~~~~~~~--Dv~sl--------------G~il~~l~~g~~  232 (307)
T 2nru_A          190 VMTSRIVGTTAYMAPEALR----GEITPKS--DIYSF--------------GVVLLEIITGLP  232 (307)
T ss_dssp             EECSSCCSCGGGCCHHHHT----TEECTHH--HHHHH--------------HHHHHHHHHCCC
T ss_pred             ccccccCCCcCcCChHHhc----CCCCccc--hhHHH--------------HHHHHHHHHCCC
Confidence            1223457999999999876    3477788  99999              999999766543


No 260
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.88  E-value=5.9e-24  Score=210.56  Aligned_cols=175  Identities=19%  Similarity=0.207  Sum_probs=111.3

Q ss_pred             hhHHHHHHHHHHHHHHHH--------HcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCC
Q psy7309           2 GRAWRLLREIIEGLSHIH--------SQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPID   73 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH--------~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~   73 (454)
                      .+++.++.|++.||.|||        ++||+||||||+|||++.++.+||+|||++........                
T Consensus       139 ~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------  202 (342)
T 1b6c_B          139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD----------------  202 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTT----------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceecccccc----------------
Confidence            468899999999999999        89999999999999999999999999999975432100                


Q ss_pred             CCCcccCCCCCcCcccccceecccccccccc---ccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHH
Q psy7309          74 STAFYSHDTSHTGQVGTALYAAPELDSHGVK---AMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEEL  150 (454)
Q Consensus        74 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~---~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l  150 (454)
                           ..........||+.|+|||++.....   ..++.++  ||||+              |+++|||+++.+....  
T Consensus       203 -----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~--Di~sl--------------G~il~el~tg~~~~~~--  259 (342)
T 1b6c_B          203 -----TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA--DIYAM--------------GLVFWEIARRCSIGGI--  259 (342)
T ss_dssp             -----EEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHH--HHHHH--------------HHHHHHHHTTBCBTTB--
T ss_pred             -----ccccccccCCcCcccCCHhhhcccccccccccCCcc--cHHHH--------------HHHHHHHHhccCcCCc--
Confidence                 00112345689999999999872211   1344567  99999              9999998775321000  


Q ss_pred             HHHhhhcCCCCCCc-----hhhhhhhhhc-cCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCC
Q psy7309         151 KHNIRRENGPSTGS-----NVQKSLQKFQ-KSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPS  224 (454)
Q Consensus       151 ~~~i~~~~~p~~~~-----~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpt  224 (454)
                         ......|+...     ........+. ....+.++..     |.   .........+++     .+||+.||++|||
T Consensus       260 ---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~l~~li-----~~cl~~dp~~Rps  323 (342)
T 1b6c_B          260 ---HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR-----WQ---SCEALRVMAKIM-----RECWYANGAARLT  323 (342)
T ss_dssp             ---CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-----GG---TSHHHHHHHHHH-----HHHCCSSGGGSCC
T ss_pred             ---ccccccCccccCcCcccHHHHHHHHHHHHhCCCCccc-----cc---chhHHHHHHHHH-----HHHhccChhhCCC
Confidence               00001122221     1122222221 1122222221     10   011113445566     9999999999999


Q ss_pred             hhhhhcC
Q psy7309         225 SEQNLCQ  231 (454)
Q Consensus       225 a~e~l~h  231 (454)
                      ++|+++|
T Consensus       324 ~~~i~~~  330 (342)
T 1b6c_B          324 ALRIKKT  330 (342)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998874


No 261
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.87  E-value=1.4e-23  Score=213.29  Aligned_cols=101  Identities=26%  Similarity=0.445  Sum_probs=81.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEE----ccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCc
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFI----DYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAF   77 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl----~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (454)
                      ..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|||+|+....                       
T Consensus       112 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~-----------------------  168 (396)
T 4eut_A          112 SEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED-----------------------  168 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC-----------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC-----------------------
Confidence            4688999999999999999999999999999999    7777899999999975421                       


Q ss_pred             ccCCCCCcCcccccceecccccccc-----ccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCch
Q psy7309          78 YSHDTSHTGQVGTALYAAPELDSHG-----VKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRP  144 (454)
Q Consensus        78 ~~~~~~~~~~~gT~~Y~aPE~~~~~-----~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~  144 (454)
                         .......+||+.|+|||++...     ....|+.++  ||||+              ||++|||++|+.
T Consensus       169 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~--DiwSl--------------G~il~el~tg~~  221 (396)
T 4eut_A          169 ---DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV--DLWSI--------------GVTFYHAATGSL  221 (396)
T ss_dssp             ---GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHH--HHHHH--------------HHHHHHHHHSSC
T ss_pred             ---CCccccccCCccccCHHHhhccccccccccCCCcHH--HHHHH--------------HHHHHHHHHCCC
Confidence               1123346799999999998611     025678888  99999              888888766543


No 262
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A
Probab=99.87  E-value=2.5e-22  Score=208.42  Aligned_cols=142  Identities=10%  Similarity=0.010  Sum_probs=129.9

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHc-C
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQN-G  381 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~-~  381 (454)
                      |..+.+++.|++.++++|+++||.+|.||+|++.+++..+      .+++|+| |.+|+.++||||.|.|++|+++.+ .
T Consensus        46 P~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sg~~~~~~~emy~~-d~~~~~l~LRP~~t~~i~~~~~~~~~  124 (471)
T 3a32_A           46 LGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLF-DIEGHEFAVKPMNCPYHILLFLNEVA  124 (471)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHTCCCTTGGGGSEEE-EETTEEEEECSCSHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCEEEECCeeeehHHhhhccCccccccceEEE-ecCCcEEEEccccHHHHHHHHHhhhh
Confidence            8888899999999999999999999999999999998543      3689999 999999999999999999998864 1


Q ss_pred             --C---CCceeeEeecCccccCCCC--CC--ccceEEEEEEEEEcCCCCcccH--HHHHHHHHHHHHh-CCC----CCcE
Q psy7309         382 --S---IVSMKRYCIDRVFRERRVL--GF--HPRELYECAFDIVTNTPGVLTM--GSLRRCLMGSFRR-FNY----GNIS  445 (454)
Q Consensus       382 --~---~~~~k~~y~g~vfR~~~~~--~g--~~rE~~Q~g~eiig~~~~~~~d--~e~~~~~~~~l~~-~~~----~~~~  445 (454)
                        .   ..|+|+||+|+|||++.++  .|  |.|||+|+|+|++|.+ +..+|  +|++.++.++|+. ||+    +++.
T Consensus       125 s~r~~~~lP~rl~~~g~vfR~E~~~~~~Gl~R~REF~Q~~~e~f~~~-~~~~de~~e~i~~~~~~l~~~lGl~~~~~~~~  203 (471)
T 3a32_A          125 KHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVPG-GRVIDVVYDVFEEMKLVLERLFKLGVSSETFK  203 (471)
T ss_dssp             HHGGGSCSSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEEG-GGHHHHHHHHHHHHHHHHHHTSCCCCSTTTEE
T ss_pred             hccccccCCeEEeeccceeccCCCcccccceeEEEEEECCeEEEcCh-HHHHHHHHHHHHHHHHHHHHhhCCCcCCCCeE
Confidence              1   4799999999999999888  89  9999999999999987 77888  9999999999999 999    7899


Q ss_pred             EEcCccc
Q psy7309         446 FAPHPRV  452 (454)
Q Consensus       446 i~i~~~~  452 (454)
                      |.+|++.
T Consensus       204 l~i~~~~  210 (471)
T 3a32_A          204 VRLSMSD  210 (471)
T ss_dssp             EEEECCC
T ss_pred             EEEecCC
Confidence            9999974


No 263
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A*
Probab=99.86  E-value=1.6e-22  Score=209.15  Aligned_cols=155  Identities=12%  Similarity=0.049  Sum_probs=137.2

Q ss_pred             hCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeE
Q psy7309         290 FNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIV  363 (454)
Q Consensus       290 f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~  363 (454)
                      +.+...++.|++       |..+.++++|++.+++.|.++||.+|.||+|++.+++..+      .++||+|.|++|+.+
T Consensus        52 i~~~~~G~~d~l-------P~g~~~~~~i~~~ir~~~~~~G~~ei~tP~l~~~el~~~sg~~d~~~~em~~~~d~~~~~~  124 (458)
T 2i4l_A           52 LRQEAAGIYAWL-------PLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKREL  124 (458)
T ss_dssp             EEEEETTEEEEC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSCTTSEEEECTTCCEE
T ss_pred             eeccCCcceEEC-------CCHHHHHHHHHHHHHHHHHHcCCEEEEcCccCcHHHHHhcCCccccccceEEEEeCCCCeE
Confidence            345556677777       8888999999999999999999999999999999987543      368999999999999


Q ss_pred             eeCC---CCCHHHHHHHHHcCCCCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcCCCCcccHHHHHHH---HHH
Q psy7309         364 TLPH---DLRIPFARYLAQNGSIVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTNTPGVLTMGSLRRC---LMG  434 (454)
Q Consensus       364 ~Lr~---d~T~p~aR~~a~~~~~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~~~~~~~d~e~~~~---~~~  434 (454)
                      +|||   |+|.+++|..++.....|+|+||+|+|||++ +++.|  |.|||+|+|++++|.+ +..+|+|++.+   +.+
T Consensus       125 ~LrPt~ee~t~~i~r~~~~s~~~lP~rl~~ig~~fR~E~~p~~Gl~R~REF~q~d~~~f~~~-~~~ad~e~~~~~~~~~~  203 (458)
T 2i4l_A          125 LYGPTNEEMITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVD-EAGARKSYNKMFVAYLR  203 (458)
T ss_dssp             EECSCCHHHHHHHHHHHCCBGGGCSEEEEEEEEEECCCSSCBTGGGBCSEEEEEEEEEEESS-HHHHHHHHHHHHHHHHH
T ss_pred             EECCCChHHHHHHHHHHHhhccccCeeeEEecCEeeCCCCCCCCcccccceEEeEEEEEECC-HHHHHHHHHHHHHHHHH
Confidence            9999   9999999998764336899999999999998 88889  9999999999999987 78899998755   999


Q ss_pred             HHHhCCCCCcEEEcCcccc
Q psy7309         435 SFRRFNYGNISFAPHPRVL  453 (454)
Q Consensus       435 ~l~~~~~~~~~i~i~~~~~  453 (454)
                      +|+++|++ +.+.+|+++.
T Consensus       204 i~~~lGl~-~~~~~~~~g~  221 (458)
T 2i4l_A          204 TFARMGLK-AIPMRAETGP  221 (458)
T ss_dssp             HHHTTTCC-EEEEECCCCS
T ss_pred             HHHHcCCc-eEEEEccccc
Confidence            99999996 9999988753


No 264
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A*
Probab=99.85  E-value=8.8e-22  Score=211.77  Aligned_cols=143  Identities=11%  Similarity=0.058  Sum_probs=131.3

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCC-CeEeeCCCCCHHHHHHHHHcC
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGG-SIVTLPHDLRIPFARYLAQNG  381 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G-~~~~Lr~d~T~p~aR~~a~~~  381 (454)
                      |..+.++++|++.++++|.++||.+|.||.|++.+++..+      .++||++.|.+| +.++|||+.|.+++|.++.+.
T Consensus       268 P~g~~~~~~l~~~ir~~~~~~Gy~eV~tP~l~~~~l~~~sG~~d~~~~~mf~~~d~~~~~~~~LrP~~~~~~~~~~~~~~  347 (645)
T 1nyr_A          268 PNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKP  347 (645)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCCEEETTTEEEEECSSSHHHHHHHHHTSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHhhCCCccccccCcceeEecCCCeEEEeCCCCCHHHHHHHHhhh
Confidence            8888999999999999999999999999999999998653      368999999999 999999999999999998753


Q ss_pred             C---CCceeeEeecCccccCCCC--CC--ccceEEEEEEEEEcCCCCcccH--HHHHHHHHHHHHhCCCCCcEEEcCccc
Q psy7309         382 S---IVSMKRYCIDRVFRERRVL--GF--HPRELYECAFDIVTNTPGVLTM--GSLRRCLMGSFRRFNYGNISFAPHPRV  452 (454)
Q Consensus       382 ~---~~~~k~~y~g~vfR~~~~~--~g--~~rE~~Q~g~eiig~~~~~~~d--~e~~~~~~~~l~~~~~~~~~i~i~~~~  452 (454)
                      .   ..|+|+||+|+|||++.++  .|  |.|||+|+|++++|.+ +..+|  +|++.++.++|+.+|+++|.+++|++.
T Consensus       348 ~syr~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~Q~d~~~f~~~-~~~~d~~~e~i~~~~~~l~~lGl~~~~~~l~~~~  426 (645)
T 1nyr_A          348 HSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRP-DQIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRD  426 (645)
T ss_dssp             CBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEECG-GGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEECC
T ss_pred             hhccCCCeEEEEeccEEecCCCccccCcceeeeEEEccEEEEcCH-HHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence            2   4799999999999998876  56  9999999999999987 77888  999999999999999989999999875


No 265
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A*
Probab=99.84  E-value=7.9e-21  Score=193.47  Aligned_cols=152  Identities=8%  Similarity=0.019  Sum_probs=133.3

Q ss_pred             hCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeE
Q psy7309         290 FNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIV  363 (454)
Q Consensus       290 f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~  363 (454)
                      |.+...++.|++       |....+++.|++.++++|.++||.+|.||+|++.+++..+      .++||+ .|.+|+.+
T Consensus        15 ~~~~~~G~~d~l-------P~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~em~~-~d~~~~~~   86 (401)
T 1evl_A           15 MQEEAPGMVFWH-------NDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREY   86 (401)
T ss_dssp             CCTTSTTCCEEC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSGGGCCE-EEETTEEE
T ss_pred             ecCCCCcceEEC-------chHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHHhcCcHhhhchhhEe-EecCCceE
Confidence            355556667777       8888899999999999999999999999999999988643      368999 99999999


Q ss_pred             eeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCC--CCC--ccceEEEEEEEEEcCCCCcccHH---HHHHHHH
Q psy7309         364 TLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRV--LGF--HPRELYECAFDIVTNTPGVLTMG---SLRRCLM  433 (454)
Q Consensus       364 ~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~--~~g--~~rE~~Q~g~eiig~~~~~~~d~---e~~~~~~  433 (454)
                      +|||+.|.|++|.++.+..   ..|+|+||+|+|||++.+  +.|  |.|||+|+|++++|.  ...+|+   |++.++.
T Consensus        87 ~LrP~~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~p~~Gl~R~reF~q~d~~~f~~--~~~~~~e~~e~i~~~~  164 (401)
T 1evl_A           87 CIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCT--EEQIRDEVNGCIRLVY  164 (401)
T ss_dssp             EECSCSHHHHHHHHTSSCCBGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEC--GGGHHHHHHHHHHHHH
T ss_pred             EEcCCCCHHHHHHHHhhhhhhhhCChhhccccceecCCCCcccccccccCcEEecceEEeCC--HHHHHHHHHHHHHHHH
Confidence            9999999999999886422   479999999999999884  788  999999999999985  566788   5899999


Q ss_pred             HHHHhCCCCCcEEEcCcc
Q psy7309         434 GSFRRFNYGNISFAPHPR  451 (454)
Q Consensus       434 ~~l~~~~~~~~~i~i~~~  451 (454)
                      ++|+.+|++++.+.+|++
T Consensus       165 ~~~~~lgl~~~~~~~~~~  182 (401)
T 1evl_A          165 DMYSTFGFEKIVVKLSTR  182 (401)
T ss_dssp             HHHHTTTCSCCEEEEECC
T ss_pred             HHHHHcCCCceEEEEecC
Confidence            999999998899999986


No 266
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.83  E-value=1.2e-22  Score=220.61  Aligned_cols=144  Identities=25%  Similarity=0.302  Sum_probs=107.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCC
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHD   81 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (454)
                      .+++.++.||+.||.|||++|||||||||+|||++.+ .+||+|||+++....                           
T Consensus       182 ~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~---------------------------  233 (681)
T 2pzi_A          182 AEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS---------------------------  233 (681)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC---------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhccc---------------------------
Confidence            4688999999999999999999999999999999874 899999999975421                           


Q ss_pred             CCCcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchhhHHHHHHHhhhcCCCC
Q psy7309          82 TSHTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPKTLEELKHNIRRENGPS  161 (454)
Q Consensus        82 ~~~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~~~~~l~~~i~~~~~p~  161 (454)
                        ....+||+.|+|||++.    ..++.++  ||||+              ||++|+|+++.+..               
T Consensus       234 --~~~~~gt~~y~aPE~~~----~~~~~~s--Di~sl--------------G~~l~~l~~g~~~~---------------  276 (681)
T 2pzi_A          234 --FGYLYGTPGFQAPEIVR----TGPTVAT--DIYTV--------------GRTLAALTLDLPTR---------------  276 (681)
T ss_dssp             --CSCCCCCTTTSCTTHHH----HCSCHHH--HHHHH--------------HHHHHHHHSCCCEE---------------
T ss_pred             --CCccCCCccccCHHHHc----CCCCCce--ehhhh--------------HHHHHHHHhCCCCC---------------
Confidence              14467999999999986    2346677  99999              99999977654311               


Q ss_pred             CCchhhhhhhhhccCCCCCCCccccccccccccccccccchhHHHHHHHHhhhcCCCCCCCCChhhhhcCcccc
Q psy7309         162 TGSNVQKSLQKFQKSPPSVYREWRSSFEWSTVRNNIKSNFQHFLILIHQQKWCLNHDPSKRPSSEQNLCQPISL  235 (454)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~L~~dP~~Rpta~e~l~hp~f~  235 (454)
                      .+..            ....+...   .+     ...++...++|     .+||+.||++||++.+++.|+|+.
T Consensus       277 ~~~~------------~~~~~~~~---~~-----~~~~~~l~~li-----~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          277 NGRY------------VDGLPEDD---PV-----LKTYDSYGRLL-----RRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             TTEE------------CSSCCTTC---HH-----HHHCHHHHHHH-----HHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             cccc------------cccccccc---cc-----cccCHHHHHHH-----hhhccCChhhCCCHHHHHHHHHHH
Confidence            1000            00011110   00     01124566777     999999999999999999998875


No 267
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=99.83  E-value=7e-21  Score=202.43  Aligned_cols=153  Identities=13%  Similarity=0.069  Sum_probs=133.6

Q ss_pred             CCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEe
Q psy7309         291 NQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVT  364 (454)
Q Consensus       291 ~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~  364 (454)
                      .+..+++.+++       |..+.++++|++.++++|+++||.+|.||+|++.+++..+      .++||+|.|++|+.++
T Consensus        33 ~~~~~G~~~~l-------P~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~~m~~~~d~~~~~~~  105 (572)
T 2j3l_A           33 RQVAAGIYSYL-------PLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYI  105 (572)
T ss_dssp             EEEETTEEEEC-------HHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEETHHHHHHSHHHHSCTTSCEEECTTCCEEE
T ss_pred             cccCCCeeeeC-------CHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCccccchheEEEecCCCCeEE
Confidence            34445666666       8888899999999999999999999999999999987532      3689999999999999


Q ss_pred             eCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCC-CCC--ccceEEEEEEEEEcCCCCcccHHHHH---HHHHHH
Q psy7309         365 LPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRV-LGF--HPRELYECAFDIVTNTPGVLTMGSLR---RCLMGS  435 (454)
Q Consensus       365 Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~-~~g--~~rE~~Q~g~eiig~~~~~~~d~e~~---~~~~~~  435 (454)
                      |||+.|.+++|+++.+..   ..|+|+||+|+|||++.+ +.|  |.|||+|+|++++|.+ +..+|+|++   .++.++
T Consensus       106 LrP~~~~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~Gl~R~ReF~q~d~~~f~~~-~~~~~~e~~~~~~~~~~~  184 (572)
T 2j3l_A          106 LGPTHEETFTELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHAD-EASLDQSYRDYEKAYSRI  184 (572)
T ss_dssp             ECSCCHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCCTGGGSCSEEEEEEEEEEESS-HHHHHHHHHHHHHHHHHH
T ss_pred             EccccHHHHHHHHHhhccChhhcCHhhheecCeeccCcCcccCccccceeEEeeeEEEcCC-HHHHHHHHHHHHHHHHHH
Confidence            999999999998886532   479999999999999887 467  9999999999999997 788899965   489999


Q ss_pred             HHhCCCCCcEEEcCccc
Q psy7309         436 FRRFNYGNISFAPHPRV  452 (454)
Q Consensus       436 l~~~~~~~~~i~i~~~~  452 (454)
                      |+.||+. |.+.+|+++
T Consensus       185 ~~~lgl~-~~~~~~~~g  200 (572)
T 2j3l_A          185 FERCGLE-FRAIIGDGG  200 (572)
T ss_dssp             HHHTTCC-EEEEECCGG
T ss_pred             HHHcCCc-EEEEecccc
Confidence            9999996 999998865


No 268
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.83  E-value=5.6e-22  Score=210.66  Aligned_cols=97  Identities=20%  Similarity=0.227  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309           4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS   83 (454)
Q Consensus         4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (454)
                      +.+|++||+.||+|+|++|||||||||+|||++.+|++||+|||+|+....                         ....
T Consensus       341 ~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~-------------------------~~~~  395 (569)
T 4azs_A          341 REKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ-------------------------DCSW  395 (569)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----------------------------CC
T ss_pred             HHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCC-------------------------CCcc
Confidence            457999999999999999999999999999999999999999999985431                         2234


Q ss_pred             CcCcccccceeccccccccccccccccCCccccchhhhHHHHHHHHHhcceeeeeecCCchh
Q psy7309          84 HTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSKQQKAFYVEILRVLWGYLKAEVYKDRPK  145 (454)
Q Consensus        84 ~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl~~~~~~~~~~~~~~G~il~el~~~~~~  145 (454)
                      .++.+||+.|||||++.    +.+...+  |+||+              |++++++..+...
T Consensus       396 ~~t~vGTp~YmAPE~l~----g~~~~~~--d~~s~--------------g~~~~~l~~~~~~  437 (569)
T 4azs_A          396 PTNLVQSFFVFVNELFA----ENKSWNG--FWRSA--------------PVHPFNLPQPWSN  437 (569)
T ss_dssp             SHHHHHHHHHHHHHHC-------------------------------------CCCCTTHHH
T ss_pred             ccCceechhhccHHHhC----CCCCCcc--ccccc--------------ccchhhhccccch
Confidence            55689999999999987    3466677  99999              9999998765543


No 269
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=99.83  E-value=2.4e-20  Score=193.07  Aligned_cols=151  Identities=13%  Similarity=0.027  Sum_probs=131.2

Q ss_pred             CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccc-c------ccccEEEEcCC----C
Q psy7309         292 QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA-T------SETTASVMTRG----G  360 (454)
Q Consensus       292 q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~-~------~~~~~~~~d~~----G  360 (454)
                      ++..++.+++       |..+.+++.|++.++++|+++||.+|.||+|++.+++.. +      .++||.|.|.+    |
T Consensus        31 ~~~~G~~d~l-------P~g~~l~~~I~~~~r~~~~~~G~~ei~tP~l~~~el~~~~sgh~d~f~~emy~~~d~g~~~l~  103 (477)
T 1hc7_A           31 GPVRGTIVVR-------PYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELE  103 (477)
T ss_dssp             CSSTTCEEEC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEEEEESSSEEE
T ss_pred             cCCCCeEEEC-------ccHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHhhcCCcccccccceEEEECCCCccCC
Confidence            3456666666       888999999999999999999999999999999999865 2      36899999987    8


Q ss_pred             CeEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCCCCC--ccceEEEEEEEEEcCCCCcccHHHHHHH---H
Q psy7309         361 SIVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRVLGF--HPRELYECAFDIVTNTPGVLTMGSLRRC---L  432 (454)
Q Consensus       361 ~~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~~~g--~~rE~~Q~g~eiig~~~~~~~d~e~~~~---~  432 (454)
                      +.++|||+.|.+++|.++.+..   .+|+|+||+|+|||++.+++|  |.|||+|+|++++|.+ ...+|+|++.+   +
T Consensus       104 ~~l~LRP~~~~~i~~~~~~~~~s~r~LP~rl~qig~vfR~E~~~rGl~R~REF~q~d~~~~~~~-~~~ad~E~~~~l~~~  182 (477)
T 1hc7_A          104 EPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHAT-REEAEEEVRRMLSIY  182 (477)
T ss_dssp             EEEEECSCSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESS-HHHHHHHHHHHHHHH
T ss_pred             CeEEEcCCCcHHHHHHHHhhhhccccCCeeeEeecCEEeCCCCCCCcceeEEEEEccEEEEeCC-HHHHHHHHHHHHHHH
Confidence            9999999999999999886522   479999999999999966679  9999999999999988 88899998776   8


Q ss_pred             HHHH-HhCCCCCcEEEcCcc
Q psy7309         433 MGSF-RRFNYGNISFAPHPR  451 (454)
Q Consensus       433 ~~~l-~~~~~~~~~i~i~~~  451 (454)
                      .++| +.||+. +.+.++++
T Consensus       183 ~~i~~~~Lgl~-~~~~~~~~  201 (477)
T 1hc7_A          183 ARLAREYAAIP-VIEGLKTE  201 (477)
T ss_dssp             HHHHHHHHCCC-CEEEECCT
T ss_pred             HHHHHHhcCCe-EEEEeCCh
Confidence            9999 899996 99988874


No 270
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1
Probab=99.81  E-value=6e-20  Score=189.48  Aligned_cols=163  Identities=15%  Similarity=0.122  Sum_probs=139.7

Q ss_pred             ChhHHHHHHH--HhCC--CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccc-c-----
Q psy7309         279 SKGYKYLVAA--CFNQ--KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA-T-----  348 (454)
Q Consensus       279 s~~~~~~~~~--~f~q--~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~-~-----  348 (454)
                      +..|.+++..  ++..  +..++.+++       |..+.+++.|++.++++|+++||.+|.||+|++.+++.. .     
T Consensus         8 ~~~~~~l~~~~~li~~~~~~~G~~d~l-------P~g~~l~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~G~~~~   80 (459)
T 1nj8_A            8 SEWYSDILEKAEIYDVRYPIKGCGVYL-------PYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKG   80 (459)
T ss_dssp             HHHHHHHHHHTSSCBCCSTTSSCCBBC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGG
T ss_pred             cHhHHHHHHhCCCccccCCCCceEEEC-------ChHHHHHHHHHHHHHHHHHHcCCEEeeCCcccCHHHHhhhcCcccc
Confidence            5566776654  3333  556666666       888899999999999999999999999999999998853 1     


Q ss_pred             -ccccEEEEcCC----CCeEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCC-CCC--ccceEE-EEEEEEE
Q psy7309         349 -SETTASVMTRG----GSIVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRV-LGF--HPRELY-ECAFDIV  416 (454)
Q Consensus       349 -~~~~~~~~d~~----G~~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~-~~g--~~rE~~-Q~g~eii  416 (454)
                       .+++|.|.|.+    |+.++|||+.|.+++|+++.+..   ..|+|+||+|+|||++.+ ++|  |.|||+ |++++++
T Consensus        81 ~~~emy~~~d~g~~~~~~~l~LRP~~~~~i~~~~~~~~~s~r~LP~rl~qig~~fR~E~~~~rGl~R~REF~qq~d~~~~  160 (459)
T 1nj8_A           81 FEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTA  160 (459)
T ss_dssp             GGGGCEEEEESSSSEEEEEEEECSSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEE
T ss_pred             cchhhEEEeccCcccCCCeeEECCCCcHHHHHHHHHhhhhcccCCeEEEEEccEecCccCCCCCceEeeeeeccCcEEEE
Confidence             36899999986    89999999999999999986421   579999999999999998 889  999999 9999999


Q ss_pred             cCCCCcccHHH---HHHHHHHHHHhCCCCCcEEEcCc
Q psy7309         417 TNTPGVLTMGS---LRRCLMGSFRRFNYGNISFAPHP  450 (454)
Q Consensus       417 g~~~~~~~d~e---~~~~~~~~l~~~~~~~~~i~i~~  450 (454)
                      |.+ ...+|+|   ++.++.++|+.||+. +.+.+++
T Consensus       161 ~~~-~~~a~~e~~~~i~~~~~~~~~LGl~-~~~~~~~  195 (459)
T 1nj8_A          161 HST-KEEAENQVKEAISIYKKFFDTLGIP-YLISKRP  195 (459)
T ss_dssp             ESS-HHHHHHHHHHHHHHHHHHHHHHTCC-CEEEEEC
T ss_pred             ECC-HHHHHHHHHHHHHHHHHHHHHCCCc-eEEeecC
Confidence            987 7889998   899999999999996 8887765


No 271
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1
Probab=99.76  E-value=1.6e-18  Score=185.72  Aligned_cols=161  Identities=7%  Similarity=0.011  Sum_probs=136.7

Q ss_pred             hHHHHHHH----HhCCCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------cc
Q psy7309         281 GYKYLVAA----CFNQKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SE  350 (454)
Q Consensus       281 ~~~~~~~~----~f~q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~  350 (454)
                      ..+.+...    .|.+..+++.+++       |..+.+++.|++.+++.|.++||.+|.||.|++.+++..+      .+
T Consensus       243 dH~~lg~~l~l~~~~~~~~G~~~~l-------P~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~  315 (642)
T 1qf6_A          243 DHRKIGKQLDLYHMQEEAPGMVFWH-------NDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKD  315 (642)
T ss_dssp             CHHHHHHHTTCEECCTTSTTCCEEC-------HHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGG
T ss_pred             CHHHHHHhcCccccccCCCCcEEEC-------CcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCccccccc
Confidence            34555553    2455555566666       8888999999999999999999999999999999998653      36


Q ss_pred             ccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCC--CCC--ccceEEEEEEEEEcCCCCcc
Q psy7309         351 TTASVMTRGGSIVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRV--LGF--HPRELYECAFDIVTNTPGVL  423 (454)
Q Consensus       351 ~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~--~~g--~~rE~~Q~g~eiig~~~~~~  423 (454)
                      +||. .|.+|+.++|||+.|.+++|.++.+..   .+|+|+||+|+|||++.+  +.|  |.|||+|+|++++|.+  ..
T Consensus       316 ~my~-~d~~~~~~~LrP~~~~~~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~--~~  392 (642)
T 1qf6_A          316 AMFT-TSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTE--EQ  392 (642)
T ss_dssp             GCEE-EEETTEEEEECSSSHHHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECG--GG
T ss_pred             ccee-eecCCceEEecCCCCHHHHHHHHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCH--HH
Confidence            8999 999999999999999999999886421   479999999999999886  678  9999999999999964  46


Q ss_pred             cHHH---HHHHHHHHHHhCCCCCcEEEcCcc
Q psy7309         424 TMGS---LRRCLMGSFRRFNYGNISFAPHPR  451 (454)
Q Consensus       424 ~d~e---~~~~~~~~l~~~~~~~~~i~i~~~  451 (454)
                      +++|   ++.++.++|+.+|+++|.+.++++
T Consensus       393 ~~~e~~~~i~~~~~i~~~lGl~~~~v~l~~~  423 (642)
T 1qf6_A          393 IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTR  423 (642)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCCCEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCceEEEEecC
Confidence            7887   599999999999998899999886


No 272
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A*
Probab=99.73  E-value=7.6e-18  Score=173.50  Aligned_cols=141  Identities=9%  Similarity=-0.017  Sum_probs=121.8

Q ss_pred             chhhHHHHHHHHHHHHHH-HhcCCccccCCCcccccccccc------ccccEEEEcC--CCCeEeeCCCCCHHHHHHHHH
Q psy7309         309 SANFSLLESTGDKLRRIF-QLHGGAHFQTPLLTPLNSLTAT------SETTASVMTR--GGSIVTLPHDLRIPFARYLAQ  379 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f-~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~--~G~~~~Lr~d~T~p~aR~~a~  379 (454)
                      |..+.+++.|++.+++.+ +++||.+|.||+|++.+++..+      .++||.+.|.  +|+.++|||+.|.+++++++.
T Consensus        61 P~g~~l~~~l~~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~emy~~~d~~~~~~~l~LrPt~~~~~~~~~~~  140 (460)
T 3uh0_A           61 PNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVETTDEEKEEYGLKPMNCPGHCLIFGK  140 (460)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCCEECCCCSEEEHHHHHHHTCTTTSGGGSCEECC------CEEECSCSHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcCCEEEECCeeccHHHHHhcCCccccccceEEEecCCCCCceEEEcccCcHHHHHHHHh
Confidence            888889999999999999 9999999999999999987542      3689999987  589999999999999998875


Q ss_pred             cCC---CCceeeEeecCccccCCCC--CC--ccceEEEEEEEEEcCCCCcccHHH---HHHHHHHHH-HhCCCC------
Q psy7309         380 NGS---IVSMKRYCIDRVFRERRVL--GF--HPRELYECAFDIVTNTPGVLTMGS---LRRCLMGSF-RRFNYG------  442 (454)
Q Consensus       380 ~~~---~~~~k~~y~g~vfR~~~~~--~g--~~rE~~Q~g~eiig~~~~~~~d~e---~~~~~~~~l-~~~~~~------  442 (454)
                      ...   .+|+|+||+|+|||++.++  .|  |.|||+|.++++++.+  ..+++|   ++.++.+++ +.||+.      
T Consensus       141 ~~~s~r~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~q~d~~~f~~~--e~~~~e~~~~i~~~~~~~~~~lGl~~~~~~~  218 (460)
T 3uh0_A          141 KDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTP--SQVKSEIFNSLKLIDIVYNKIFPFVKGGSGA  218 (460)
T ss_dssp             SCCBGGGCSEEEEECCEEECCCCTTTCBTTTBCSEEEEEEEEEEECG--GGHHHHHHHHHHHHHHHHTTTSCCC-----C
T ss_pred             ccccccccCeEEEEecCeeeCCCCCCCCCceeeeeEEEeeEEEEcCH--HHHHHHHHHHHHHHHHHHHHHcCCCCccccc
Confidence            321   4799999999999999875  78  9999999999999875  367777   889999999 999998      


Q ss_pred             --CcEEEcCcc
Q psy7309         443 --NISFAPHPR  451 (454)
Q Consensus       443 --~~~i~i~~~  451 (454)
                        ++.+.+++|
T Consensus       219 ~~~~~~~l~t~  229 (460)
T 3uh0_A          219 ESNYFINFSTR  229 (460)
T ss_dssp             CSSCEEEEECC
T ss_pred             ccceEEEEccC
Confidence              899998876


No 273
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.72  E-value=6.4e-19  Score=171.07  Aligned_cols=45  Identities=13%  Similarity=0.186  Sum_probs=41.8

Q ss_pred             hHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEeccc
Q psy7309           3 RAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFG   47 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFG   47 (454)
                      ++.+++.||+.||+|||++||+||||||+|||++.+|.+||+++|
T Consensus       130 ~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~  174 (286)
T 3uqc_A          130 GAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA  174 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc
Confidence            578899999999999999999999999999999999999998554


No 274
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A*
Probab=99.72  E-value=1.7e-17  Score=172.80  Aligned_cols=162  Identities=15%  Similarity=0.125  Sum_probs=135.8

Q ss_pred             hhHHHHHHHH--hC--CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc-------
Q psy7309         280 KGYKYLVAAC--FN--QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT-------  348 (454)
Q Consensus       280 ~~~~~~~~~~--f~--q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~-------  348 (454)
                      ..|.+++...  +.  ++..++.++.       |..+.+++.|++.++++|++ ||.+|.||+|++.+++...       
T Consensus        42 ~~~~~l~~~~glid~~~~~~G~~~~~-------P~g~~l~~~i~~~~~~~~~~-G~~ei~tP~l~~~~l~~~~sG~~~~f  113 (501)
T 1nj1_A           42 EWFHNILEEAEIIDQRYPVKGMHVWM-------PHGFMIRKNTLKILRRILDR-DHEEVLFPLLVPEDELAKEAIHVKGF  113 (501)
T ss_dssp             HHHHHHHHHTTCEECCCSSTTCCEEC-------HHHHHHHHHHHHHHHHHHTT-TCEECCCCSEEEHHHHTTSHHHHHHT
T ss_pred             HhHHHHHHHCCCccccCCCCceEEEC-------ccHHHHHHHHHHHHHHHHHc-CCEEEecCcEecHHHHhcccCCcccC
Confidence            5566666542  22  3444455555       88888999999999999999 9999999999999998652       


Q ss_pred             ccccEEEEcCC----CCeEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccCCC-CCC--ccceEE-EEEEEEEc
Q psy7309         349 SETTASVMTRG----GSIVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRERRV-LGF--HPRELY-ECAFDIVT  417 (454)
Q Consensus       349 ~~~~~~~~d~~----G~~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~~~-~~g--~~rE~~-Q~g~eiig  417 (454)
                      .+++|.+.|.+    |+.++|||+.|.|++|+++.+..   .+|+|+||+|+|||++.+ ++|  |.|||+ |+++++++
T Consensus       114 ~~emy~~~d~g~~~~~~~l~LrPt~e~~i~~~~~~~~~s~~~LPlr~~q~g~~fR~E~~~~rGl~R~REF~~q~e~~~~~  193 (501)
T 1nj1_A          114 EDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIH  193 (501)
T ss_dssp             TTTCCEEEEETTEEEEEEEEECSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEE
T ss_pred             CcceEEEecCCCcccCCeeEEccCCCHHHHHHHHhhhcccccCCEEEEeecCEeeCCCCCCCCCceeEEEeeeeeEEEEE
Confidence            36899999876    78999999999999999986522   579999999999999988 889  999999 99999999


Q ss_pred             CCCCcccHHHH---HHHHHHHHHhCCCCCcEEEcCcc
Q psy7309         418 NTPGVLTMGSL---RRCLMGSFRRFNYGNISFAPHPR  451 (454)
Q Consensus       418 ~~~~~~~d~e~---~~~~~~~l~~~~~~~~~i~i~~~  451 (454)
                      .+ ...+++|+   +.++.++|+.||+. |.+.++++
T Consensus       194 ~~-~e~a~~e~~~~l~~~~~i~~~Lgl~-~~~~~~~~  228 (501)
T 1nj1_A          194 AT-ASEAEEQVERAVEIYKEFFNSLGIP-YLITRRPP  228 (501)
T ss_dssp             SS-HHHHHHHHHHHHHHHHHHHHHHTCC-CEEEECCT
T ss_pred             CC-HHHHHHHHHHHHHHHHHHHHHCCCe-EEEEeCCc
Confidence            87 77888885   89999999999996 88877653


No 275
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=99.61  E-value=1.4e-15  Score=157.59  Aligned_cols=156  Identities=12%  Similarity=0.053  Sum_probs=128.1

Q ss_pred             ChhHHHHHHH--HhC--CCCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------
Q psy7309         279 SKGYKYLVAA--CFN--QKVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------  348 (454)
Q Consensus       279 s~~~~~~~~~--~f~--q~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------  348 (454)
                      +..|++++..  +..  ++.++..+++       |..+.+++.|++.+++.|+++||.+|.||.|++.+++...      
T Consensus        25 ~~wy~~l~~~aglid~r~~~~G~~~~l-------P~G~~i~~~L~~~~~~~~~~~Gy~eV~tP~l~~~el~~k~sgh~~~   97 (518)
T 3ial_A           25 ADWFDAIMDAAELVDRRYPVKGCVVFR-------PYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKG   97 (518)
T ss_dssp             HHHHHHHHHHTTCEETTSSSTTCCEEC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTSSHHHHHH
T ss_pred             cHHHHHHHHHCCCcccCCCCCCeEEEC-------ccHHHHHHHHHHHHHHHHHHcCCEEEEcccccCHHHHHhhcCCccc
Confidence            3455555543  222  4555555555       8888999999999999999999999999999999988532      


Q ss_pred             -ccccEEEEcCC----CCeEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEc
Q psy7309         349 -SETTASVMTRG----GSIVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVT  417 (454)
Q Consensus       349 -~~~~~~~~d~~----G~~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig  417 (454)
                       .+++|.+.|.+    |+.++|||..+.+++++++....   .+|+|+|++|+|||++ +++.|  |.|||+|.+.+++|
T Consensus        98 f~~emy~v~d~g~~~~~~~l~LrPt~e~~i~~~~~~~i~SyrdLPlrl~q~~~~fR~E~~~~~GL~R~REF~q~e~h~f~  177 (518)
T 3ial_A           98 FEAECFWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCH  177 (518)
T ss_dssp             HGGGCEEEEEETTEEEEEEEEECSSSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTCCSCBTTTBCSEEEEEEEEEEE
T ss_pred             ccccEEEEecCCCcccCcceeECCCCcHHHHHHHHhhhcccccCCeEEEEEeceecCCCCCCCCCceeeEEEEeeEEEEE
Confidence             37899999876    78999999999999999876421   5799999999999998 67789  99999999999998


Q ss_pred             CCCCcccHHHHHHH---HHHHH-HhCCCC
Q psy7309         418 NTPGVLTMGSLRRC---LMGSF-RRFNYG  442 (454)
Q Consensus       418 ~~~~~~~d~e~~~~---~~~~l-~~~~~~  442 (454)
                      .+ ...+++|+..+   ..+++ +.||+.
T Consensus       178 ~~-~e~a~~e~~~~l~~~~~i~~~~LGlp  205 (518)
T 3ial_A          178 AT-AEDAVSQLSDYWKVIDTIFSDELCFK  205 (518)
T ss_dssp             SS-HHHHHHHHHHHHHHHHHHHTTTTCCC
T ss_pred             CC-HHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            77 77788887665   58899 899984


No 276
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A
Probab=99.57  E-value=5e-15  Score=143.32  Aligned_cols=133  Identities=11%  Similarity=0.014  Sum_probs=110.4

Q ss_pred             HHHHHHHHHHHHHHhcCCccccCCCccccccccccc---c-ccEEEEcCCCCeEeeCCCCCHHHHHHHHHc--CCCCcee
Q psy7309         314 LLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATS---E-TTASVMTRGGSIVTLPHDLRIPFARYLAQN--GSIVSMK  387 (454)
Q Consensus       314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~---~-~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~--~~~~~~k  387 (454)
                      ..+.+++.++++|..+||.+|.||.|++.+.+....   + +++.+.++.++.++|||.++....+.++.+  ....|+|
T Consensus        72 ~~~~l~~~ir~~~~~~Gf~EV~tP~Le~~~l~~~~g~~~~~~m~~~~npl~e~~~LRp~l~p~l~~~~r~~~~~~~~Plr  151 (288)
T 3dsq_A           72 ALLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIR  151 (288)
T ss_dssp             HHHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC--CCTTTSCEEETTEEECSCSHHHHHHHHHHHTTTSCSCEE
T ss_pred             HHHHHHHHHHHHHHHCCCEEEECCeeecHHHHhhcCCCcccccEEeecccccchhhhhcChHHHHHHHHHHHhCCCCCEE
Confidence            368899999999999999999999999988764321   1 455555554466899999999888765543  1258999


Q ss_pred             eEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEE
Q psy7309         388 RYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFA  447 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~  447 (454)
                      +|++|+|||++..+.+|.+||+|+++.++|.. ....++|++.++.++|+.+|+++|.+.
T Consensus       152 lfeiG~vFR~E~~~~~r~~EF~qle~~i~g~~-~~~~f~elkg~le~ll~~LGl~~~~~~  210 (288)
T 3dsq_A          152 IFEIGTCYRKESQGAQHLNEFTMLNLTELGTP-LEERHQRLEDMARWVLEAAGIREFELV  210 (288)
T ss_dssp             EEEEEEEECSCCSSSCCCSEEEEEEEEEETCC-GGGHHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred             EEEEeeEEecCCCCCCcCccEEEEEEEEEcCC-chhhHHHHHHHHHHHHHHcCCCCcEEe
Confidence            99999999999888899999999999999986 667899999999999999999777764


No 277
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens}
Probab=99.56  E-value=1.7e-14  Score=149.90  Aligned_cols=159  Identities=11%  Similarity=0.030  Sum_probs=126.9

Q ss_pred             ChhHHHHHHHH--hCC-CCCCccccccccccCCchhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccc-c------
Q psy7309         279 SKGYKYLVAAC--FNQ-KVSPADDITYDISLSRSANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA-T------  348 (454)
Q Consensus       279 s~~~~~~~~~~--f~q-~~~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~-~------  348 (454)
                      +..|++++...  .+. +.++..++.       |..+.+++.|++.+.+.++++||.+|.||.|++.+++.. +      
T Consensus        32 ~~wy~~l~~~~~lid~~~~~G~~~~l-------P~G~~i~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~k~sGh~~~f  104 (519)
T 4hvc_A           32 ADWYSQVITKSEMIEYHDISGCYILR-------PWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADF  104 (519)
T ss_dssp             HHHHHHHHHHTTCEEECSSTTCEEEC-------HHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCCSCGGG
T ss_pred             hHHHHHHHHHCCCeEecCCCCeEEEC-------ccHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHhcccCCcccc
Confidence            34566666542  222 344444444       888899999999999999999999999999999999864 2      


Q ss_pred             ccccEEEEcCCCC----eEeeCCCCCHHHHHHHHHcCC---CCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcC
Q psy7309         349 SETTASVMTRGGS----IVTLPHDLRIPFARYLAQNGS---IVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTN  418 (454)
Q Consensus       349 ~~~~~~~~d~~G~----~~~Lr~d~T~p~aR~~a~~~~---~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~  418 (454)
                      .+++|.+.|.+|+    .++|||..+.+++++++....   .+|+|+|++|+|||++ +++.|  |.|||+|.+.++++.
T Consensus       105 ~~emy~~~d~g~~~l~e~l~LrPtse~~i~~~~~~~i~SyrdLPlrl~q~g~~fR~E~~~~~Gl~R~ReF~q~e~h~~~~  184 (519)
T 4hvc_A          105 APEVAWVTRSGKTELAEPIAIRPTSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFA  184 (519)
T ss_dssp             GGGCEEEEEETTEEEEEEEEECSSSHHHHHHHHHHHCSSGGGCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEES
T ss_pred             cccceEEeccCCcccccceeeCCCCcHHHHHHHHhhccccccCCeEEEEEcCeeeCCCCCCCCCcceeEEEEeeEEEEec
Confidence            2689999988754    699999999999999886422   4799999999999998 67788  999999999999887


Q ss_pred             CCCcccHHHHH---HHHHHHHHhC-CCCCcEE
Q psy7309         419 TPGVLTMGSLR---RCLMGSFRRF-NYGNISF  446 (454)
Q Consensus       419 ~~~~~~d~e~~---~~~~~~l~~~-~~~~~~i  446 (454)
                      . ...+++|+.   .+..++++.+ |+ .+.+
T Consensus       185 ~-~e~a~~E~~~~l~~~~~i~~~ll~l-p~~~  214 (519)
T 4hvc_A          185 T-MEEAAEEVLQILDLYAQVYEELLAI-PVVK  214 (519)
T ss_dssp             S-HHHHHHHHHHHHHHHHHHHHTTSCC-CCEE
T ss_pred             C-HHHHHHHHHHHHHHHHHHHHHhcCC-ccee
Confidence            7 778888854   5677888886 76 3433


No 278
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A
Probab=99.55  E-value=7.3e-15  Score=157.80  Aligned_cols=146  Identities=13%  Similarity=0.039  Sum_probs=118.7

Q ss_pred             CCccccccccccCCchhhHHHHHHHHHHHHHHH-hcCCccccCCCccccccccccc---------------cccEEEEcC
Q psy7309         295 SPADDITYDISLSRSANFSLLESTGDKLRRIFQ-LHGGAHFQTPLLTPLNSLTATS---------------ETTASVMTR  358 (454)
Q Consensus       295 ~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~-~~G~~~i~tp~le~~~~~~~~~---------------~~~~~~~d~  358 (454)
                      .++-||.       |..+.++++|++.+++.|. ..||.+|.||+|+|.+++..++               +++|++ |.
T Consensus        91 ~G~~d~l-------P~G~~l~~~Ie~~~r~~~~~~~g~~EV~tP~l~~~~lwk~SGH~~~f~d~m~~~~~~~e~yr~-D~  162 (693)
T 2zt5_A           91 SGLYDFG-------PVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRA-DH  162 (693)
T ss_dssp             TTCEEEC-------HHHHHHHHHHHHHHHHHTHHHHTCEECCCCSEEEHHHHHHHTHHHHCEEEEEEBSSSCCEEEH-HH
T ss_pred             CCeEEEC-------CChHHHHHHHHHHHHHHHHHhcCcEEEEeCCcccHHHHhhcCCcccccccceeeccCCceeec-cH
Confidence            4566666       8888899999999999998 5699999999999999876531               245544 32


Q ss_pred             -------------------------------------------------------------------------CCCeEee
Q psy7309         359 -------------------------------------------------------------------------GGSIVTL  365 (454)
Q Consensus       359 -------------------------------------------------------------------------~G~~~~L  365 (454)
                                                                                               +|+.+.|
T Consensus       163 l~e~~~~~~~~~~~~~~~~~~e~~~~~~~l~~~~~eel~~li~~~~~~~P~~g~~~~~~~~fnlmf~t~igp~~~~~~~L  242 (693)
T 2zt5_A          163 LLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYL  242 (693)
T ss_dssp             HHHHHHHHHHHSTTCCHHHHHHHHHHHTTTTTCCHHHHHHHHHHTTCBCSSSCCBBCCCEEEECCCEEECSSSSSSEEEE
T ss_pred             hHHHHHHHhhccccccHHHHHHHHHHHhhccCCCHHHHHHHHHHcCCCCCCCCCCCCCcchhheeeeccccCCCCcceee
Confidence                                                                                     5789999


Q ss_pred             CCCCCHHH----HHHHHHcCCCCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcCCCCcc-------cHHH----
Q psy7309         366 PHDLRIPF----ARYLAQNGSIVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTNTPGVL-------TMGS----  427 (454)
Q Consensus       366 r~d~T~p~----aR~~a~~~~~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~~~~~~-------~d~e----  427 (454)
                      |||.|.++    +|.+..++...|+|+|++|++||++ +|+.|  |.|||+|+++++++.+....       +|+|    
T Consensus       243 RPEtaqg~f~~f~r~~~~~~~~LP~~~aqiG~~fRnEisPr~GLlR~REF~q~d~e~F~~p~~~~~~~y~~v~da~~~~~  322 (693)
T 2zt5_A          243 RPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLY  322 (693)
T ss_dssp             CSCSHHHHHTTHHHHHHHTTTCSCEEEEEEEEEECCCSSCCSGGGSCSEEEEEEEEEEECTTCCCCTTGGGTTTCEEEEE
T ss_pred             ccccchHHHHHHHHHHHHhCcCCCEEEEeecceecCCCCCCCCCccceeeEEccceEEeCcchhcchhHHHHHHHHHhhh
Confidence            99999988    9988776447999999999999998 89999  99999999999999763321       2322    


Q ss_pred             --------------------------------HHHHHHHHHHhCCCCCcEEEc
Q psy7309         428 --------------------------------LRRCLMGSFRRFNYGNISFAP  448 (454)
Q Consensus       428 --------------------------------~~~~~~~~l~~~~~~~~~i~i  448 (454)
                                                      .|.++.+++..+|++...+++
T Consensus       323 ~~~~~~~~~~~~~~~~~ea~~~g~i~~e~~~~~i~~~~~f~~~lGi~~~~~~~  375 (693)
T 2zt5_A          323 SAKAQVSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISPDKLRF  375 (693)
T ss_dssp             CHHHHHTTCCCEEEEHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred             hhhhhccccccccchhhhhhhhcccchHHHHHHHHHHHHHHHHcCcCccEEEE
Confidence                                            888999999999997655554


No 279
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=99.53  E-value=7.3e-15  Score=149.59  Aligned_cols=137  Identities=8%  Similarity=0.006  Sum_probs=113.9

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHc--
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQN--  380 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~--  380 (454)
                      |....+++.|++.+.+.|.++||.+|.||.|++.+++..+      .+++|++.   |+.++|||+.|+|++++++..  
T Consensus       169 p~ga~l~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~---~~~l~LrPt~e~~i~~~~~~~i~  245 (425)
T 2dq3_A          169 GWGARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCE---RDNLYLIPTAEVPLTNLYREEIL  245 (425)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHSCTTTTGGGSCBCT---TTCCEECSSTHHHHHGGGTTEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCCCcChhhheEec---CCeEEEcCCCcHHHHHHHHhhcc
Confidence            7788899999999999999999999999999999987542      36788874   578999999999999998753  


Q ss_pred             -CCCCceeeEeecCccccCCCCCC-------ccceEEEEEEEEEcCCC-CcccHHHHHHHHHHHHHhCCCCCcE-EEcC
Q psy7309         381 -GSIVSMKRYCIDRVFRERRVLGF-------HPRELYECAFDIVTNTP-GVLTMGSLRRCLMGSFRRFNYGNIS-FAPH  449 (454)
Q Consensus       381 -~~~~~~k~~y~g~vfR~~~~~~g-------~~rE~~Q~g~eiig~~~-~~~~d~e~~~~~~~~l~~~~~~~~~-i~i~  449 (454)
                       ....|+|+||+|+|||++..+.|       |.|||.|.+..+++.+. +....+|++.++.++|+.||+. |. +.+.
T Consensus       246 s~~~LPlrl~~~g~~FR~E~~~~Gr~~~Gl~R~reF~q~E~~~f~~pe~s~~~~~e~i~~~~~il~~LGL~-~rvv~l~  323 (425)
T 2dq3_A          246 KEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLP-YRVVELC  323 (425)
T ss_dssp             ETTTCCEEEEEEEEEECCCCSCCSSSCSSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred             ccccCCeEEEEecCEecCCCCcccccccCcccccceEEeeEEEECCHHHHHHHHHHHHHHHHHHHHHCCCc-eEEEEec
Confidence             11579999999999999875544       88999999999998762 1123489999999999999995 66 4443


No 280
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A*
Probab=99.51  E-value=3.9e-14  Score=147.56  Aligned_cols=146  Identities=12%  Similarity=0.107  Sum_probs=118.2

Q ss_pred             CCccccccccccCCchhhHHHHHHHHHHHHHHH--hcCCccccCCCccccccccccc------cccEE------------
Q psy7309         295 SPADDITYDISLSRSANFSLLESTGDKLRRIFQ--LHGGAHFQTPLLTPLNSLTATS------ETTAS------------  354 (454)
Q Consensus       295 ~~~~d~~yD~~~~~~~~~~~~~~i~~~l~~~f~--~~G~~~i~tp~le~~~~~~~~~------~~~~~------------  354 (454)
                      .++.++.       |....+++.|++.+++.|.  ++||.+|.||.|++.+++..++      +.+++            
T Consensus        29 ~G~~d~~-------P~G~~l~~~l~~~~r~~~~~~~~g~~ev~tP~l~~~~l~~~SGh~~~f~d~m~~~~~~~~~~r~d~  101 (505)
T 1ati_A           29 QGVYDYG-------PLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDH  101 (505)
T ss_dssp             TTCEEEC-------HHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEEEEEC-----------
T ss_pred             CCcceeC-------ccHHHHHHHHHHHHHHHHHHhhCCcEEEEccccCCHHHHHhcCChhhcCccceeccccccccchhh
Confidence            4555555       7788899999999999999  9999999999999999875541      34444            


Q ss_pred             -------------------------E------E-----------------cCC-------------------------CC
Q psy7309         355 -------------------------V------M-----------------TRG-------------------------GS  361 (454)
Q Consensus       355 -------------------------~------~-----------------d~~-------------------------G~  361 (454)
                                               |      .                 +.+                         |+
T Consensus       102 l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~i~~p~~~~~~m~~~~~~cp~~~~~~~~~~~~~fnlmf~t~~gpt~ee~~  181 (505)
T 1ati_A          102 LLKEQPEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGL  181 (505)
T ss_dssp             ---------------------------------------------------------CCCCEEEECBEEEECSSCCCGGG
T ss_pred             hhhhhhhhhccccccccccHHHHHHHHHhhccccccccccccccccccCCccCccccccccchhhhhhhcccCCcccccc
Confidence                                     2      1                 111                         45


Q ss_pred             eEeeCCCCCHHH----HHHHHHcCCCCceeeEeecCccccC-CCCCC--ccceEEEEEEEEEcCCCCccc--HHHHHHHH
Q psy7309         362 IVTLPHDLRIPF----ARYLAQNGSIVSMKRYCIDRVFRER-RVLGF--HPRELYECAFDIVTNTPGVLT--MGSLRRCL  432 (454)
Q Consensus       362 ~~~Lr~d~T~p~----aR~~a~~~~~~~~k~~y~g~vfR~~-~~~~g--~~rE~~Q~g~eiig~~~~~~~--d~e~~~~~  432 (454)
                      .+.|||+.|.++    +|.+..+...+|+|+|++|++||++ +|+.|  |.|||+|.++++++.. ....  +++++.++
T Consensus       182 ~~~LRPE~t~~i~~~~~~~~~sy~r~LP~rl~qig~~FR~E~~pr~GL~R~REF~q~d~~~f~~~-e~~~~~~~~~i~~~  260 (505)
T 1ati_A          182 LAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRP-GEDEYWHRYWVEER  260 (505)
T ss_dssp             EEEECSSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEEEEEECG-GGHHHHHHHHHHHH
T ss_pred             ceeecccchhHHHHHHHHHHHhcCCCCCEEEEEeeceeeCCCCCCCCCCcccceEEeeEEEEECH-HHHHHHHHHHHHHH
Confidence            789999999999    8887776227999999999999998 78889  9999999999999987 5444  88999999


Q ss_pred             HHHHHhCCCCCcEEEc
Q psy7309         433 MGSFRRFNYGNISFAP  448 (454)
Q Consensus       433 ~~~l~~~~~~~~~i~i  448 (454)
                      .++++.||+..+.+.+
T Consensus       261 ~~i~~~LGl~~~~v~~  276 (505)
T 1ati_A          261 LKWWQEMGLSRENLVP  276 (505)
T ss_dssp             HHHHHHTTCCGGGEEE
T ss_pred             HHHHHHcCCCeEEEEE
Confidence            9999999997655544


No 281
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.50  E-value=9e-16  Score=161.95  Aligned_cols=92  Identities=18%  Similarity=0.152  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchhhhhhhcCCCccccccCccCCCCCCCCcccCCCC
Q psy7309           4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNILQKHAGPLARELTGYILPPIDSTAFYSHDTS   83 (454)
Q Consensus         4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (454)
                      ++.++.|++.||+|||++||+||||||+|||++.  ++||+|||+|+.........                  ......
T Consensus       433 ~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~------------------~~~~~~  492 (540)
T 3en9_A          433 NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKA------------------VDLIVF  492 (540)
T ss_dssp             CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHH------------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccc------------------cchhhh
Confidence            4579999999999999999999999999999998  99999999998543210000                  000001


Q ss_pred             CcCcccccceeccccccccccccccccCCccccch
Q psy7309          84 HTGQVGTALYAAPELDSHGVKAMYNQFTPQNYFSK  118 (454)
Q Consensus        84 ~~~~~gT~~Y~aPE~~~~~~~~~~~~~~~~DiwSl  118 (454)
                      ....+||+.|||||++... ...|+..+  |+||.
T Consensus       493 ~~~~~GT~~y~APEv~~~~-~~~Y~~~~--d~ws~  524 (540)
T 3en9_A          493 KKAVLSTHHEKFDEIWERF-LEGYKSVY--DRWEI  524 (540)
T ss_dssp             HHHHHHHCGGGHHHHHHHH-HHHHHHHC--TTHHH
T ss_pred             hhhhcCCCCcCCHHHHHHH-HHHHHHHH--hHHHH
Confidence            2357899999999999721 25688888  99998


No 282
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A*
Probab=99.43  E-value=1e-12  Score=127.63  Aligned_cols=125  Identities=18%  Similarity=0.192  Sum_probs=104.7

Q ss_pred             HHHHHHHHHHHHHhcCCccccCCCccccccccc-----c---ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC--CC
Q psy7309         315 LESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA-----T---SETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS--IV  384 (454)
Q Consensus       315 ~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~-----~---~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~--~~  384 (454)
                      ++++++.++++|..+||.+|.||+|+..+.+..     .   .+.++.| |   +..+|||+++.++.+.++++.+  ..
T Consensus        79 ~~~i~~~ir~~l~~~Gf~EV~Tp~l~~~~~~~~~~~~~~~p~~~~~~~~-~---~~~~LR~slsp~L~~~l~~n~~~~~~  154 (290)
T 3qtc_A           79 LGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV-D---KNFCLRPMLTPNLYNYLRKLDRALPD  154 (290)
T ss_dssp             HHHHHHHHHHHHHHTTCEEECCCSEEETHHHHHTTCCTTSSGGGGCCEE-T---TTEEECSCSHHHHHHHHHHHTTTSCS
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCceeeHHHHHhcCCCcCCchhhhheee-C---CCeeEcccChHHHHHHHHHhhccCCC
Confidence            788999999999999999999999998876421     1   1245555 3   5799999999999999887532  57


Q ss_pred             ceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCCcEEE
Q psy7309         385 SMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFNYGNISFA  447 (454)
Q Consensus       385 ~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~~~~~~i~  447 (454)
                      |.|+|++|+|||.+....++++||+|++++++|..   ..+.|+..++.++|+.+|+ +|.+.
T Consensus       155 p~rlfeiG~vFR~E~~~~~~~~Ef~ql~~~~~g~~---~~f~elkg~le~ll~~lGl-~~~~~  213 (290)
T 3qtc_A          155 PIKIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSG---CTRENLESIITDFLNHLGI-DFKIV  213 (290)
T ss_dssp             SEEEEEEEEEECCCSCSSSCCSEEEEEEEEEESTT---CCHHHHHHHHHHHHHHHTC-CCEEE
T ss_pred             CeEEEEEcCEEecCCCCCcCcchheEEEEEEEcCC---hHHHHHHHHHHHHHHHcCC-CcEEe
Confidence            89999999999998777789999999999999976   3578999999999999998 56653


No 283
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=99.35  E-value=5.7e-13  Score=135.38  Aligned_cols=133  Identities=7%  Similarity=-0.034  Sum_probs=109.6

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcC-
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQNG-  381 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~-  381 (454)
                      |....+++.|++.+.+.+.++||.+|.||.|++.+++..+      .+++|.+.|   +.++|+|..++|++++++... 
T Consensus       163 p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~L~Pt~e~~~~~~~~~~~~  239 (421)
T 1ses_A          163 GDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLNALHSGEIL  239 (421)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBTT---SSEEECSSTHHHHHHTTTTCEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHcCCEEEeCCceecHHHHHhcCCCCcCchhcEEEcC---CeEEEeecCcHHHHHHhccccc
Confidence            6777899999999999999999999999999999987643      368998854   679999999999999877431 


Q ss_pred             --CCCceeeEeecCccccC-----CCCCC--ccceEEEEEEEEEcCCCCcccHH---HHHHHHHHHHHhCCCCCcE
Q psy7309         382 --SIVSMKRYCIDRVFRER-----RVLGF--HPRELYECAFDIVTNTPGVLTMG---SLRRCLMGSFRRFNYGNIS  445 (454)
Q Consensus       382 --~~~~~k~~y~g~vfR~~-----~~~~g--~~rE~~Q~g~eiig~~~~~~~d~---e~~~~~~~~l~~~~~~~~~  445 (454)
                        ...|+|+|++|+|||++     ++..|  |.|||.|....++..+....+++   |++.++.++|+.||+. |.
T Consensus       240 s~~~LPlr~~~~g~~FR~E~g~~Gr~~~GL~R~rqF~q~E~~~f~~p~~e~s~~~~~e~~~~~~~il~~LGL~-~r  314 (421)
T 1ses_A          240 PYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELP-YR  314 (421)
T ss_dssp             EGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTCC-EE
T ss_pred             CchhCCEEEEecCCeecCCccccCcCCCCCeeeeeeeeeeEEEEeCCCHHHHHHHHHHHHHHHHHHHHHCCCc-eE
Confidence              14799999999999998     56778  99999997666665430024454   8999999999999994 54


No 284
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=99.34  E-value=1.5e-12  Score=133.37  Aligned_cols=136  Identities=10%  Similarity=-0.030  Sum_probs=110.7

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccc------cccEEEEcCCCCeEeeCCCCCHHHHHHHHHc--
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATS------ETTASVMTRGGSIVTLPHDLRIPFARYLAQN--  380 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~------~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~--  380 (454)
                      |....+++.|++.+.+.+.++||.+|.||.|++.+++..++      +++|++.|   +.++|||..++|++++++..  
T Consensus       190 p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~LrPt~e~~~~~~~~~~~~  266 (455)
T 2dq0_A          190 NEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDFEDVIYKVED---EDLYLIPTAEHPLAGMHANEIL  266 (455)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHTTSCTTHHHHTCCBBTT---SSCEECSSTHHHHHHTTTTEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCEEEeCCcccCHHHHHhcCCCCCChHhhCeecC---CcEEEcCcCcHHHHHHHHhCcc
Confidence            67778999999999999999999999999999999986542      57888754   67999999999999988753  


Q ss_pred             -CCCCceeeEeecCccccCCCCCC-------ccceEEEEEEEEEcCCCC-cccHHHHHHHHHHHHHhCCCCCcEEEc
Q psy7309         381 -GSIVSMKRYCIDRVFRERRVLGF-------HPRELYECAFDIVTNTPG-VLTMGSLRRCLMGSFRRFNYGNISFAP  448 (454)
Q Consensus       381 -~~~~~~k~~y~g~vfR~~~~~~g-------~~rE~~Q~g~eiig~~~~-~~~d~e~~~~~~~~l~~~~~~~~~i~i  448 (454)
                       ...+|+|+|++|+|||++.+++|       |.|||.|...-++..+.. .....|++.++.++|+.||+. |.+..
T Consensus       267 s~~~LPlr~~~~g~~FR~E~~~~G~~~~GL~R~rqF~kvE~~~f~~pe~s~~~~~e~l~~~~~il~~LGL~-yrv~~  342 (455)
T 2dq0_A          267 DGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIP-YRVVN  342 (455)
T ss_dssp             ETTTCSEEEEEEEEEECCCTTCSSCSCCSSSSCSEEEEEEEEEEECTTTHHHHHHHHHHHHHHHHHHTTCC-EEEEE
T ss_pred             CchhCCEEEEEecCcccCCCCccccccCCceeeeeeEeeeEEEecCHHHHHHHHHHHHHHHHHHHHHcCCc-eEEEE
Confidence             12589999999999999987666       899999976666665411 122338999999999999994 65544


No 285
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.34  E-value=2.5e-13  Score=131.48  Aligned_cols=48  Identities=27%  Similarity=0.446  Sum_probs=45.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      +++..++.|++.||.|||++||+||||||+|||++ ++.+||+|||+|+
T Consensus       193 ~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~  240 (282)
T 1zar_A          193 ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV  240 (282)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred             hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence            35678999999999999999999999999999999 9999999999986


No 286
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A*
Probab=99.22  E-value=6.3e-11  Score=114.93  Aligned_cols=122  Identities=14%  Similarity=0.125  Sum_probs=94.3

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccc-cccccc-c---cccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCC
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPL-NSLTAT-S---ETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSI  383 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~-~~~~~~-~---~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~  383 (454)
                      ...+.+|.+|.+.++++|..+||.+|+||+|++. +.+... .   .++|.+. -.|+.+.||..-.....+.++  +  
T Consensus        12 ~~~~~~rs~i~~~ir~~f~~~GF~EVeTP~l~~~~~~~~~~~~~e~a~~f~~~-~~~~~~~L~~Spe~~~~~l~~--~--   86 (294)
T 1nnh_A           12 SPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAEVE-IYGVKMRLTHSMILHKQLAIA--M--   86 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCEEECCCCEESCCCCCCSCTTCCCCCCCEEE-ETTEEEEECSCSHHHHHHHHH--T--
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEccchhccCCCCCcceeEEEE-cCCCCEEeccChHHHHHHHhh--c--
Confidence            3566789999999999999999999999999998 655433 1   4566652 345678888554444444443  2  


Q ss_pred             CceeeEeecCccccCCCCC--Cccc-eEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Q psy7309         384 VSMKRYCIDRVFRERRVLG--FHPR-ELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRFN  440 (454)
Q Consensus       384 ~~~k~~y~g~vfR~~~~~~--g~~r-E~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~~  440 (454)
                      .+.|+|++|+|||+++||.  +|.+ ||+|+++|++|.+     ++|++.++.+.++.++
T Consensus        87 g~~rvf~ig~~FR~E~pq~~~~RH~~EFtqle~e~~~~~-----~~~l~~~~e~l~~~l~  141 (294)
T 1nnh_A           87 GLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK-----MEDIMRLIERLVYGLF  141 (294)
T ss_dssp             TCCEEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCC-----HHHHHHHHHHHHHHHH
T ss_pred             CccceEEEEccEeCCCCCCCCCccccceeEEEEEecCCC-----HHHHHHHHHHHHHHHH
Confidence            3679999999999998663  6777 9999999999974     7889988888887664


No 287
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A
Probab=99.19  E-value=1.2e-11  Score=128.15  Aligned_cols=131  Identities=11%  Similarity=0.023  Sum_probs=108.6

Q ss_pred             chhhHHHHHHHHHHHH-HHHhcCCccccCCCcccccccccc------ccccEEEE-----c-------------------
Q psy7309         309 SANFSLLESTGDKLRR-IFQLHGGAHFQTPLLTPLNSLTAT------SETTASVM-----T-------------------  357 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~-~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~-----d-------------------  357 (454)
                      |....+++.|.+.+.+ ++.++||.+|.||.|++.+++..+      .+++|.+.     |                   
T Consensus       228 P~G~~L~~~L~~~~~~e~~~~~G~~EV~tP~L~~~el~~~SGh~~~F~demy~v~~~~~Rd~~~~e~~~~~~~~~~~~~~  307 (522)
T 2cja_A          228 PQSARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIYYVCPPQTRDPDYWEEVADYYKVTHEVPT  307 (522)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHTCEECBCCSEEEHHHHHHHTGGGTCGGGCCEEECBSCCCHHHHHHHHHHHHHHSSCCH
T ss_pred             chHHHHHHHHHHHHHHHHHHHcCCEEEECCCcccHHHHhhcCCcCccccceeeeecCCccchhhhhhhhhhhhccccccc
Confidence            7777899999999996 689999999999999999987653      36899985     2                   


Q ss_pred             ------CCCCeEeeCCCCCHHHHHHHHHcC---CCCceeeEe-ecCccccCCCC--C--CccceEEEEEEEEEcCCCCcc
Q psy7309         358 ------RGGSIVTLPHDLRIPFARYLAQNG---SIVSMKRYC-IDRVFRERRVL--G--FHPRELYECAFDIVTNTPGVL  423 (454)
Q Consensus       358 ------~~G~~~~Lr~d~T~p~aR~~a~~~---~~~~~k~~y-~g~vfR~~~~~--~--g~~rE~~Q~g~eiig~~~~~~  423 (454)
                            .+++.++|||..+.|++++++...   ...|+|+|+ +|+|||++ ++  .  +|.|||.|.++++++.+ . .
T Consensus       308 ~~~~~~~~~~~l~LrPt~e~~i~~~f~~~i~s~~~LPlrl~q~ig~~FR~E-pgs~~GL~R~REF~q~E~~~F~~p-e-~  384 (522)
T 2cja_A          308 KLIKEKIAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYE-SGGIHGIERVDEFHRIEIVWIGTK-E-E  384 (522)
T ss_dssp             HHHHHHBCCCCEEECSSSSGGGGGGTTTCEECGGGCSEEEEECSSEEECCC-SSSCCCTTSCSEEEEEEEEEEEEH-H-H
T ss_pred             cccccccCCCcEEEccCCcHHHHHHHHhcccccccCCeeEEEEcCceEeCC-CCCCCCCeEeEEEEEeeEEEEeCh-H-H
Confidence                  147899999999999999877421   147999999 99999998 65  3  78999999999999965 2 2


Q ss_pred             cH---HHHH-HHHHHHHHhCCCC
Q psy7309         424 TM---GSLR-RCLMGSFRRFNYG  442 (454)
Q Consensus       424 ~d---~e~~-~~~~~~l~~~~~~  442 (454)
                      ++   .+++ ..+..+++.||+.
T Consensus       385 s~ee~ee~i~~~~~~~l~~LGLp  407 (522)
T 2cja_A          385 VLKCAEELHDRYMHIFNDILDIE  407 (522)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCC
Confidence            33   4567 7888899999997


No 288
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.06  E-value=7.7e-11  Score=112.22  Aligned_cols=48  Identities=21%  Similarity=0.354  Sum_probs=44.8

Q ss_pred             hHHHHHHHHHHHHHHHH-HcCCcccCCCCCcEEEccCCCeEEecccchhhh
Q psy7309           3 RAWRLLREIIEGLSHIH-SQGIIHRDLKPVNIFIDYEDHVKIGDFGLATNI   52 (454)
Q Consensus         3 ~i~~i~~qil~gL~~LH-~~giiHrDLKp~NILl~~~~~vKL~DFGla~~~   52 (454)
                      .+..++.|++.||.||| ++||+||||||+|||++.  .++|+|||+|...
T Consensus       171 ~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          171 DVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            57889999999999999 999999999999999997  8999999999743


No 289
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=99.06  E-value=4.9e-10  Score=114.20  Aligned_cols=115  Identities=11%  Similarity=0.013  Sum_probs=91.0

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeC--CCCCHHHHHHHHHcCCCCcee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLP--HDLRIPFARYLAQNGSIVSMK  387 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr--~d~T~p~aR~~a~~~~~~~~k  387 (454)
                      ..+.+|.+|.+.++++|..+||.+|+||.|+....-  ...++|.+ +..|+.+.||  |+++.-  + ++.    .+.|
T Consensus       133 ~~~~~rs~i~~~ir~~f~~~gF~eVeTP~l~~~~~e--~~~~~f~~-~~~~~~~~Lr~Spel~~~--~-~~~----g~~r  202 (434)
T 1x54_A          133 AIMKVKETLIMAAREWLLKDGWHEVFPPILVTGAVE--GGATLFKL-KYFDKYAYLSQSAQLYLE--A-AIF----GLEK  202 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCSS--CGGGCCEE-EETTEEEEECSCSHHHHH--H-HHH----HHSE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEeCcEEEeecCC--CCceeEEE-eecCCcEEeccChHHHHH--H-Hhc----Cccc
Confidence            455689999999999999999999999999976321  23467777 6778899999  777643  2 332    2569


Q ss_pred             eEeecCccccCCCCCCccc-eEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhC
Q psy7309         388 RYCIDRVFRERRVLGFHPR-ELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRF  439 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~r-E~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~  439 (454)
                      +|++|+|||+++.+.+|.+ ||+|+++|.+|.+     +.|++.++-+.++.+
T Consensus       203 vf~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~-----~~dlm~~~e~ll~~l  250 (434)
T 1x54_A          203 VWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD-----LWDIMKVEEELVSYM  250 (434)
T ss_dssp             EEEEEEEECCCCCCCSSCCSEEEEEEEEEETCC-----HHHHHHHHHHHHHHH
T ss_pred             eEEEecceecCCCCCcccccEEEEeeEEEcCCC-----HHHHHHHHHHHHHHH
Confidence            9999999999988777776 9999999999974     678888777766543


No 290
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=98.99  E-value=2e-09  Score=109.42  Aligned_cols=114  Identities=11%  Similarity=0.037  Sum_probs=89.7

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeC--CCCCHHHHHHHHHcCCCCcee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLP--HDLRIPFARYLAQNGSIVSMK  387 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr--~d~T~p~aR~~a~~~~~~~~k  387 (454)
                      ..+.+|.+|.+.+++.|..+||.+|+||+|+....-  ...++|.+ +..|+.+.||  |+++  ..| ++..    +-|
T Consensus       132 ~~~~~rs~i~~~ir~ff~~~gF~eV~TP~l~~~~~e--~~~~~f~~-~~~~~~~~L~~Spql~--~~~-~~~g----~~r  201 (429)
T 1wyd_A          132 AVIKIQSLALKAFRETLYKEGFIEIFTPKIIASATE--GGAQLFPV-IYFGKEAFLAQSPQLY--KEL-MAGV----VER  201 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCSS--TTCCCCEE-EETTEEEEECSCCHHH--HHH-HHHH----HSE
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCEEEECCEEEeeCCC--CCceeEEE-ecCCceEEecCCcHHH--HHH-HHhC----cCc
Confidence            445689999999999999999999999999976321  23467777 5678899999  6655  555 4432    569


Q ss_pred             eEeecCccccCCCCCCccc-eEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         388 RYCIDRVFRERRVLGFHPR-ELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~r-E~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      +|++|+|||++..+.+|.+ ||+|+++|..|.+     ..|++.++-+.++.
T Consensus       202 vf~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~-----~~dlm~~~e~ll~~  248 (429)
T 1wyd_A          202 VFEVAPAWRAEESDTPFHLAEFISMDVEMAFAD-----YNDVMQLLEKILHN  248 (429)
T ss_dssp             EEEEEEEECCCCCCSSSCCSEEEEEEEEEETCC-----HHHHHHHHHHHHHH
T ss_pred             eEEEcccccccCCccccccceeeEeeeeecCCC-----HHHHHHHHHHHHHH
Confidence            9999999999988777776 9999999999974     57777766665544


No 291
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A*
Probab=98.99  E-value=3.7e-10  Score=114.65  Aligned_cols=116  Identities=12%  Similarity=0.021  Sum_probs=62.3

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeC--CCCCHHHHHHHHHcCCCCcee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLP--HDLRIPFARYLAQNGSIVSMK  387 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr--~d~T~p~aR~~a~~~~~~~~k  387 (454)
                      ..+.+|.+|.+.++++|..+||.+|+||+|+....-  ...++|.+ +..|+.+.||  |+++.   +.++ .+   .-|
T Consensus       123 ~~~~~rs~i~~~ir~~f~~~gF~EV~TPil~~~~~e--~~~~~f~~-~~~g~~~~L~~Spel~~---~~l~-~g---~~r  192 (422)
T 1n9w_A          123 APLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGAE--GGSGLFGV-DYFEKRAYLAQSPQLYK---QIMV-GV---FER  192 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCC-------------------------------CHHHH---HHHH-HH---HSE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEeCCC--CCceeEEE-eeCCCcEEeeeCHHHHH---HHHh-hC---CCc
Confidence            455689999999999999999999999999976321  22356766 5678889999  77763   3444 32   459


Q ss_pred             eEeecCccccCCCCCCccc-eEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhC
Q psy7309         388 RYCIDRVFRERRVLGFHPR-ELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRF  439 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~r-E~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~  439 (454)
                      +|++|+|||+++.+.+|.+ ||+|+++|..|.+ +   ..|++.++-+.++.+
T Consensus       193 vf~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~-d---~~dlm~l~e~ll~~l  241 (422)
T 1n9w_A          193 VYEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIA-D---EEDLMRLEEALLAEM  241 (422)
T ss_dssp             EEEEEEC-------------CCEEEEEEEESCS-S---HHHHHHHHHHHHHHH
T ss_pred             eeEEeCceECCCCCCCcccceeEEeeeeeeCCC-C---HHHHHHHHHHHHHHH
Confidence            9999999999988777777 9999999999984 2   577777766665443


No 292
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens}
Probab=98.91  E-value=3.5e-09  Score=109.00  Aligned_cols=137  Identities=9%  Similarity=0.006  Sum_probs=105.2

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcC--------CCCeEeeCCCCCHHHH
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTR--------GGSIVTLPHDLRIPFA  374 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~--------~G~~~~Lr~d~T~p~a  374 (454)
                      |.-..+++.|++-+.+.+.++||.+|.||.|.+.+++...      .+++|++.|.        .++.++|+|--.+|++
T Consensus       198 p~GarL~raL~~f~~d~~~~~Gy~EV~~P~lv~~el~~~sG~l~~f~eemy~v~~~g~~~~~~~~~~~l~L~PTaE~~l~  277 (522)
T 3vbb_A          198 GVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIA  277 (522)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHSCCC-CCSCCCEEC------------CCEEECSSTHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCEEEECCcccchHHHhhcCCcccCcccceEeecCCccccccccCcceeEcccCcHHHH
Confidence            5556788899999999999999999999999999986542      3689999875        3678999999999999


Q ss_pred             HHHHHc---CCCCceeeEeecCccccCCCCCC-------ccceEEEEEEEEEcCCCC---cccHHHHHHHHHHHHHhCCC
Q psy7309         375 RYLAQN---GSIVSMKRYCIDRVFRERRVLGF-------HPRELYECAFDIVTNTPG---VLTMGSLRRCLMGSFRRFNY  441 (454)
Q Consensus       375 R~~a~~---~~~~~~k~~y~g~vfR~~~~~~g-------~~rE~~Q~g~eiig~~~~---~~~d~e~~~~~~~~l~~~~~  441 (454)
                      .++...   ...+|+|+|++|+|||++....|       |.|||.|...-++..+..   .....+++.++.++|+.||+
T Consensus       278 ~l~~~ei~s~~dLPlr~~~~s~cFR~Eags~GrdtrGL~RvhQF~kvE~~~f~~pe~e~s~~e~e~ml~~~e~il~~LGL  357 (522)
T 3vbb_A          278 ALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGI  357 (522)
T ss_dssp             TTSTTCEECTTTCCEEEEEEEEEECSCCCC----CCCSSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHhhhecccccCCeeEEEecccccCCCCcCCccCCCcceeeeeEEEEEEEEeCCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence            876532   12589999999999999875433       678999987777766522   22346788899999999999


Q ss_pred             CCcEE
Q psy7309         442 GNISF  446 (454)
Q Consensus       442 ~~~~i  446 (454)
                      . |.+
T Consensus       358 p-yrv  361 (522)
T 3vbb_A          358 P-YHI  361 (522)
T ss_dssp             C-EEE
T ss_pred             c-eEE
Confidence            4 544


No 293
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A*
Probab=98.88  E-value=1.2e-08  Score=105.33  Aligned_cols=101  Identities=15%  Similarity=0.116  Sum_probs=80.5

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeC--CCCCHHHHHHHHHcCCCCcee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLP--HDLRIPFARYLAQNGSIVSMK  387 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr--~d~T~p~aR~~a~~~~~~~~k  387 (454)
                      ..+.+|.+|...+++.|..+||.+|+||+|+..+.  ....++|.+- ..|+.+.||  |++-  .-+.++.    ..-|
T Consensus       176 ~~~~~rs~i~~~ir~~~~~~gF~EV~TPil~~~~~--~~ga~~f~~~-~~~~~~~L~~Spql~--~k~l~~~----g~~r  246 (487)
T 1eov_A          176 AIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPS--EGGSSVFEVT-YFKGKAYLAQSPQFN--KQQLIVA----DFER  246 (487)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCS--SSSSCCCEEE-ETTEEEEECSCTHHH--HHHHHHT----TCCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEEEecC--CCCcccceec-cCCccEEcccChHHH--HHHHHhc----CCCc
Confidence            45568999999999999999999999999998752  2234677773 478899999  7773  3444442    3459


Q ss_pred             eEeecCccccCCCCCCccc-eEEEEEEEE-EcCC
Q psy7309         388 RYCIDRVFRERRVLGFHPR-ELYECAFDI-VTNT  419 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~r-E~~Q~g~ei-ig~~  419 (454)
                      +|++|+|||+++.+.+|.+ ||+|+++|+ +|.+
T Consensus       247 vy~ig~~FR~E~~~~~Rh~pEFt~le~e~af~~~  280 (487)
T 1eov_A          247 VYEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEH  280 (487)
T ss_dssp             EEEEEEEECCCCCCCTTCCSEEEEEEEEEECSSC
T ss_pred             eEEEeccEecCCCCCCccchhhhhhhhhhhhhcC
Confidence            9999999999988778887 999999998 6754


No 294
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=98.87  E-value=3e-09  Score=109.72  Aligned_cols=137  Identities=9%  Similarity=0.005  Sum_probs=110.7

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------cc-ccEEEEcCCCCeEeeCCCCCHHHHHHHHHc-
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SE-TTASVMTRGGSIVTLPHDLRIPFARYLAQN-  380 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~-~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~-  380 (454)
                      |.-..+.+.|++-+.+.+.++||.+|.||.|.+.+++...      .+ ++|++.|.+|+.++|+|--.+|++.+++.. 
T Consensus       216 p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~emf~v~~~~~~~l~L~PTaE~~~~~l~~~~i  295 (501)
T 1wle_A          216 GAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHS  295 (501)
T ss_dssp             THHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHTCCSSSSSCSSCBBCTTTSSSCEECSSHHHHHHHHHTTEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHHhhcCCCccCccccEEEecCCCCeEEECCcCcHHHHHHHhhcc
Confidence            5666789999999999999999999999999999986542      24 899998777889999999999999887642 


Q ss_pred             --CCCCceeeEeecCccccCCC----CCC--ccceEEEEEEEEEcCC---CCcccHHHHHHHHHHHHHhCCCCCcEE
Q psy7309         381 --GSIVSMKRYCIDRVFRERRV----LGF--HPRELYECAFDIVTNT---PGVLTMGSLRRCLMGSFRRFNYGNISF  446 (454)
Q Consensus       381 --~~~~~~k~~y~g~vfR~~~~----~~g--~~rE~~Q~g~eiig~~---~~~~~d~e~~~~~~~~l~~~~~~~~~i  446 (454)
                        ...+|+|+|++|+|||++..    ..|  |.|||.|...-++..+   .+.....+++.++.++|+.||+. |.+
T Consensus       296 ~s~~~LPlrl~~~s~~FR~Ea~~G~d~~GL~RvhqF~kvE~~~f~~pe~e~s~~~~e~~l~~~~~il~~LgLp-yrv  371 (501)
T 1wle_A          296 VAFRDLPIRMVCSSTCYRAETDTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELGLH-FRV  371 (501)
T ss_dssp             EEGGGCSEEEEEEEEEECCCCSCC--CCSSSSCSEEEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCC-EEE
T ss_pred             CCcccCCeeEEeccCcccCCCCCCCCCcCceeeeeeeeeeEEEEeCCcHHHHHHHHHHHHHHHHHHHHHCCCc-EEE
Confidence              11589999999999999754    122  5589999888888765   12345667889999999999994 664


No 295
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=98.76  E-value=6.1e-08  Score=100.11  Aligned_cols=118  Identities=14%  Similarity=0.149  Sum_probs=90.1

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEE-cCCCCeEeeCCCCCHHHHHHHHHcCCCCceee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVM-TRGGSIVTLPHDLRIPFARYLAQNGSIVSMKR  388 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~-d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~  388 (454)
                      ..+.+|..|...+++.|..+||.+|+||+|++...  ....++|.+- |..|+.+.||----+-.-|.++    ...-|+
T Consensus       172 ~~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~--Ga~a~~F~~~~~~~~~~~yLr~SpqLylk~l~v----~G~~rV  245 (493)
T 3a74_A          172 KTFITRSLIIQSMRRYLDSHGYLEVETPMMHAVAG--GAAARPFITHHNALDMTLYMRIAIELHLKRLIV----GGLEKV  245 (493)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCC--SSSSCCCEEEETTTTEEEEECSCSHHHHHHHHH----TTCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeEEEECCeEEecCC--CCcccceEecccCCCceeEEecCHHHHHHHHhh----cccCce
Confidence            55668999999999999999999999999996532  1124678775 7788999999322223333333    234699


Q ss_pred             EeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         389 YCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       389 ~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      |+||+|||.+.....|..||+|+++|..+.+     ..+++.++-+.+..
T Consensus       246 yeig~~FR~E~~~~rH~pEFT~lE~e~af~d-----~~dlm~l~E~ll~~  290 (493)
T 3a74_A          246 YEIGRVFRNEGISTRHNPEFTMLELYEAYAD-----FRDIMKLTENLIAH  290 (493)
T ss_dssp             EEEEEEECCCCCBTTBCSEEEEEEEEEETCC-----HHHHHHHHHHHHHH
T ss_pred             EEECccccCCCCCcccCCceeEEEEEecCCC-----HHHHHHHHHHHHHH
Confidence            9999999999888899999999999999865     56677666665544


No 296
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=98.72  E-value=2.7e-08  Score=101.72  Aligned_cols=136  Identities=11%  Similarity=0.068  Sum_probs=106.4

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHc--
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQN--  380 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~--  380 (454)
                      |.-..+++.+++-+.+...++||.+|.||.|.+.+++...      .+++|++.|. ++.++|+|-...|++.+++..  
T Consensus       182 p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~l~~f~eemf~v~~~-~~~~~LipTaE~pl~~l~~~ei~  260 (485)
T 3qne_A          182 NYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG-EDEKYLIATSEQPISAYHAGEWF  260 (485)
T ss_dssp             THHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHTTTCCEEEET-TEEEEECSSTHHHHHHHTTTCEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccccceEEEeCC-CCeEEEeccccHHHHHHHhcccc
Confidence            6666788999999999999999999999999999987543      2689999875 678999999999999886632  


Q ss_pred             C---CCCceeeEeecCccccCCCCCC-------ccceEEEEEEEEEcCCC-CcccHHHHHHHHHHHHHhCCCCCcEE
Q psy7309         381 G---SIVSMKRYCIDRVFRERRVLGF-------HPRELYECAFDIVTNTP-GVLTMGSLRRCLMGSFRRFNYGNISF  446 (454)
Q Consensus       381 ~---~~~~~k~~y~g~vfR~~~~~~g-------~~rE~~Q~g~eiig~~~-~~~~d~e~~~~~~~~l~~~~~~~~~i  446 (454)
                      .   ..+|+|+|.+++|||++..+.|       |.|||.|...-++..+. +...-.+++.++.++|+.||+. |.+
T Consensus       261 ~S~y~dLPlr~~~~s~cfR~Eag~~Grdt~GL~RvhqF~kvE~~~f~~pe~s~~e~e~ml~~~e~il~~LgLp-yrv  336 (485)
T 3qne_A          261 ESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGLP-YRV  336 (485)
T ss_dssp             SSHHHHCCEEEEEEEEEECSCCC-----CCSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTCC-EEE
T ss_pred             ccchhcCCeeEEEecccccCCCCCCCccCCCceeeeeeeeeeEEEEeCHHHHHHHHHHHHHHHHHHHHHCCCc-EEE
Confidence            1   1469999999999999764433       67899988777776541 1223356888899999999994 543


No 297
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=98.71  E-value=5e-08  Score=99.79  Aligned_cols=136  Identities=11%  Similarity=0.029  Sum_probs=107.7

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHc--
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQN--  380 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~--  380 (454)
                      |.-..+.+.|++-+++...++||.+|.||.|.+.+++...      .+++|++.|. ++.++|+|---.|++-++...  
T Consensus       205 p~GarL~~aL~~f~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~mf~v~~~-~~~~~L~PTaE~~l~~l~~~~i~  283 (484)
T 3lss_A          205 GGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGD-GDKKYLIATSEMPIAAYHRGRWF  283 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHHHTCCEEESS-SSCEEECSSTHHHHHHHTTTCEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHHhcCCcccccccceEeecC-CcceEEeccCcHHHHHHHhcccc
Confidence            4555688899999999999999999999999999987543      2689999764 778999999999998775531  


Q ss_pred             -CCCCceeeEeecCccccCCCCCC-------ccceEEEEEEEEEcCCCC---cccHHHHHHHHHHHHHhCCCCCcEE
Q psy7309         381 -GSIVSMKRYCIDRVFRERRVLGF-------HPRELYECAFDIVTNTPG---VLTMGSLRRCLMGSFRRFNYGNISF  446 (454)
Q Consensus       381 -~~~~~~k~~y~g~vfR~~~~~~g-------~~rE~~Q~g~eiig~~~~---~~~d~e~~~~~~~~l~~~~~~~~~i  446 (454)
                       ...+|+|+|.+|+|||++....|       |.|||.|...-++..+..   ...-.+++.++.++|+.||+. |.+
T Consensus       284 sy~dLPlr~~~~s~cFR~Eags~Grdt~GL~RvrqF~kvE~~~f~~pe~~~s~~e~e~~~~~~e~il~~LGLp-yrv  359 (484)
T 3lss_A          284 TELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGLP-YRV  359 (484)
T ss_dssp             SCCSSCEEEEEEEEEECCCTTCSSSCCSTTSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHTCC-EEE
T ss_pred             chhhCCeeEEeecCccCCCCCcCCcccCCcceeeeEEEEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHcCCc-EEE
Confidence             22589999999999999763334       678999988888876532   123456788899999999994 554


No 298
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.64  E-value=1.3e-08  Score=102.08  Aligned_cols=49  Identities=24%  Similarity=0.326  Sum_probs=44.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCC----------eEEecccchh
Q psy7309           2 GRAWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDH----------VKIGDFGLAT   50 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~----------vKL~DFGla~   50 (454)
                      +.+..++.||+.||.+||++|||||||||.|||++.+|.          +.|+||+-+.
T Consensus       205 ~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          205 PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence            356789999999999999999999999999999988763          8899999775


No 299
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=98.57  E-value=4.4e-07  Score=93.91  Aligned_cols=118  Identities=14%  Similarity=0.122  Sum_probs=88.2

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEE-cCCCCeEeeCCCCCHHHHHHHHHcCCCCceee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVM-TRGGSIVTLPHDLRIPFARYLAQNGSIVSMKR  388 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~-d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~  388 (454)
                      ..+.+|.+|...+++.|..+||.+|+||+|.+...  ....+.|.+- +.-|..+.||----+-.-|.++.    ..-|+
T Consensus       181 ~~~r~Rs~i~~~iR~f~~~~gFlEVeTPiL~~~~~--Ga~ar~F~t~~~~~~~~~yL~~SpqLylk~L~v~----G~~rV  254 (504)
T 1e1o_A          181 QTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPG--GASARPFITHHNALDLDMYLRIAPELYLKRLVVG----GFERV  254 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEECCCCSEESSCC--SSCCCCCEEEETTTTEEEEECSCSHHHHHHHHHH----TCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCeEEecCC--CCcccceEeccCCCCceEEeccCHHHHHHHHhhc----CCCcE
Confidence            55668999999999999999999999999986521  1123677664 66788899994433444444443    23499


Q ss_pred             EeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         389 YCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       389 ~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      |+||+|||.+.....|..||+|+++|..+.+     ..+++.++-+.+..
T Consensus       255 yeIg~~FR~E~~~~rH~pEFt~lE~e~af~d-----~~dlm~l~E~li~~  299 (504)
T 1e1o_A          255 FEINRNFRNEGISVRHNPEFTMMELYMAYAD-----YHDLIELTESLFRT  299 (504)
T ss_dssp             EEEEEEECCCCCCC-CCSEEEEEEEEEESCC-----HHHHHHHHHHHHHH
T ss_pred             EEEcccccCCCCCccccCceeeeeeeecCCC-----HHHHHHHHHHHHHH
Confidence            9999999999888899999999999999864     55666666555543


No 300
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A
Probab=98.52  E-value=2.3e-07  Score=96.68  Aligned_cols=134  Identities=7%  Similarity=-0.041  Sum_probs=105.6

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCCCCeEeeCCCCCHHHHHHHHHc--
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRGGSIVTLPHDLRIPFARYLAQN--  380 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~--  380 (454)
                      |.-..+.+.|++-+++.+.++||.+|.||.|.+.+++...      .+++|++.|   +.++|+|---.|++-++...  
T Consensus       272 p~Ga~l~~aL~~~~~~~~~~~Gy~ev~~P~lv~~~l~~~sG~~~~f~e~mf~~~~---~~~~L~PT~E~~~~~l~~~~i~  348 (536)
T 3err_A          272 GDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLNALHSGEIL  348 (536)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGCCEETT---TTEEECSSTHHHHHHHTTTCEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHHhcCCcccChhhceEecC---CCEEEccCCcHHHHHHHhcccc
Confidence            4556688999999999999999999999999999986542      368999865   57999999999998775532  


Q ss_pred             -CCCCceeeEeecCccccCCCCCC-------ccceEEEEEEEEEcCCC---CcccHHHHHHHHHHHHHhCCCCCcEE
Q psy7309         381 -GSIVSMKRYCIDRVFRERRVLGF-------HPRELYECAFDIVTNTP---GVLTMGSLRRCLMGSFRRFNYGNISF  446 (454)
Q Consensus       381 -~~~~~~k~~y~g~vfR~~~~~~g-------~~rE~~Q~g~eiig~~~---~~~~d~e~~~~~~~~l~~~~~~~~~i  446 (454)
                       ...+|+|+|.+|++||++....|       |.|||.|...-++..+.   +...-.+++.++.++|+.||+. |.+
T Consensus       349 s~~~LPlr~~~~~~~fR~E~gs~Gr~~~GL~RvrqF~k~e~~~f~~pe~e~s~~~~e~~~~~~~~i~~~LgLp-yrv  424 (536)
T 3err_A          349 PYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELP-YRL  424 (536)
T ss_dssp             EGGGCSEEEEEEEEEECCCTTCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTCC-EEE
T ss_pred             cHhhCCeeEEEecccccCCccccCCCCCCceeeeeeEEEEEEEEECCchHHHHHHHHHHHHHHHHHHHHcCCc-EEE
Confidence             11589999999999999763333       67899999999888762   1223345778899999999994 544


No 301
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=98.50  E-value=8.5e-07  Score=87.50  Aligned_cols=119  Identities=15%  Similarity=0.107  Sum_probs=85.1

Q ss_pred             chhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEE--c---CCCCeEeeCCCCCHHHHHHHHHcCCC
Q psy7309         309 SANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVM--T---RGGSIVTLPHDLRIPFARYLAQNGSI  383 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~--d---~~G~~~~Lr~d~T~p~aR~~a~~~~~  383 (454)
                      -..+.+|.+|...+++.|..+||.+|+||+|...+.-.. ..++|++-  +   ..+...-|+----+-.-|.++...  
T Consensus        33 ~~~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~~~a-~~~~F~~~~~~~~~~~~~~~yL~~Spql~~k~l~~~g~--  109 (345)
T 3a5y_A           33 IPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDI-HLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGC--  109 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCCCCT-TCCCCEEEECCSTTSCCEEEEECSCSHHHHHHHHHTTC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEecCCCCC-ccceEEEEecCcccccCCCEeecCCHHHHHHHHHHcCC--
Confidence            466779999999999999999999999999997653311 23455542  1   122456677444444556666332  


Q ss_pred             CceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHH
Q psy7309         384 VSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFR  437 (454)
Q Consensus       384 ~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~  437 (454)
                        -|+|+||+|||.+.....|..||+|+.+|..+.+     ..+++.++-+.++
T Consensus       110 --~rvyqIg~~FR~E~~~~rH~pEFt~lE~e~af~d-----~~d~m~~~E~li~  156 (345)
T 3a5y_A          110 --GPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD-----MYRLMNEVDDLLQ  156 (345)
T ss_dssp             --CSEEEEEEEECCCCCBTTBCSEEEEEEEEEETCC-----HHHHHHHHHHHHH
T ss_pred             --CcEEEEEcceeCCCCcccccchhheeeeeeeCCC-----HHHHHHHHHHHHH
Confidence              3999999999998887888999999999999864     3445555444443


No 302
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A*
Probab=98.47  E-value=2e-06  Score=84.88  Aligned_cols=123  Identities=15%  Similarity=0.108  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHHHhcCCccccCCCccccc----cc-ccc------ccccEEEEcCCC-----------CeEeeCCCCCH
Q psy7309         314 LLESTGDKLRRIFQLHGGAHFQTPLLTPLN----SL-TAT------SETTASVMTRGG-----------SIVTLPHDLRI  371 (454)
Q Consensus       314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~~----~~-~~~------~~~~~~~~d~~G-----------~~~~Lr~d~T~  371 (454)
                      -...+.+.|+++|...||.++.+|.+++..    .+ ...      ...+|.+.++..           +..+||..++.
T Consensus       102 p~~~~~~~Ir~~f~~~Gf~Ev~~p~v~~~~~nfd~L~~p~~hpar~~~dt~~l~nP~s~~~~~~~~~~~~~~vLRt~tsp  181 (350)
T 1b7y_A          102 PITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSP  181 (350)
T ss_dssp             HHHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTTTTTCCSSSTTTTSSCCCBEECSSCCCBCTTSCBCCSCEEECSSSTH
T ss_pred             HHHHHHHHHHHHHHHCCCEEEECcchhcchhHHHhhCCCCCCccccccccEEEcCccccccccccccccccceeeccchH
Confidence            367899999999999999999999997743    22 111      145677776543           67899999999


Q ss_pred             HHHHHHHHcCCCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhC-CC
Q psy7309         372 PFARYLAQNGSIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRF-NY  441 (454)
Q Consensus       372 p~aR~~a~~~~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~-~~  441 (454)
                      ..+|.++.+  ..|.|+|++|+|||.+.....|..||+|...=++|..   ..-..+..++..+++.+ |.
T Consensus       182 ~llr~l~~~--~~piriFEiGrVFR~d~~d~tH~pEF~qlegl~~g~~---v~f~dLKg~le~ll~~lfG~  247 (350)
T 1b7y_A          182 MQVRYMVAH--TPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEG---IAMAHLKGAIYELAQALFGP  247 (350)
T ss_dssp             HHHHHHHHC--CSSEEEEEEEEEECCCCCCSSCCSEEEEEEEEEEETT---CCHHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHhc--CCCeeEEEeeeEEECCCCCCCCCChhHEEEEEEECCC---CCHHHHHHHHHHHHHhhcCC
Confidence            999999874  4799999999999986534457789999999999974   12345555666677766 75


No 303
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=98.42  E-value=1.3e-06  Score=89.76  Aligned_cols=135  Identities=21%  Similarity=0.235  Sum_probs=101.9

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccC-CCccccc----ccccc-------ccccEEEEcCC------------------
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQT-PLLTPLN----SLTAT-------SETTASVMTRG------------------  359 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~t-p~le~~~----~~~~~-------~~~~~~~~d~~------------------  359 (454)
                      +...-...+++.++++|...||.++.+ |.+|+..    .+...       ...+|.+.++.                  
T Consensus       222 G~lHPl~~v~~~Ir~if~~mGF~Ev~t~~~ves~~~NFDaLn~P~dHPaR~~~Dtfyi~~P~~~~~~~e~~~~~v~~~He  301 (508)
T 3l4g_A          222 GHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHS  301 (508)
T ss_dssp             CBCCHHHHHHHHHHHHHHHTTCEECCCCCSEEEHHHHTGGGTCCSSSTTSSTTTSCBBSTTCBCSCCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHCcCeEeccCCccccHHHHHHhcCCCCCCcccccCceEEEcCccccccccHHHHHhhhhhhh
Confidence            333468899999999999999999875 7666532    22110       12346665431                  


Q ss_pred             -----------------CCeEeeCCCCCHHHHHHHHHcC---CCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCC
Q psy7309         360 -----------------GSIVTLPHDLRIPFARYLAQNG---SIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNT  419 (454)
Q Consensus       360 -----------------G~~~~Lr~d~T~p~aR~~a~~~---~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~  419 (454)
                                       ++..+||..+|...+|.++.|.   ...|+|+|++|+|||++.....|..+|+|.+.=++|..
T Consensus       302 ~g~~~s~g~~~~~~~~~~~~~vLRThtsp~~lr~l~~N~~~~~~~PiriFeiGrVFR~d~~DatHlpeFhQlegl~~~~~  381 (508)
T 3l4g_A          302 QGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADHG  381 (508)
T ss_dssp             TCBTTBCCCCSCCCHHHHTBEEECCCTHHHHHHHHHHHHTSSSCCCEEEEEEEEEECCSCCCSSSCSEEEEEEEEEEEES
T ss_pred             ccccCCccccccccccccccccccCCChHHHHHHHHHhhhhcCCCCceEEEEccEEecCCCCCCcCCeEEEEEEEEECCC
Confidence                             1579999999999999998742   24799999999999998877889999999998888743


Q ss_pred             CCcccHHHHHHHHHHHHHhCCCCCcEEE
Q psy7309         420 PGVLTMGSLRRCLMGSFRRFNYGNISFA  447 (454)
Q Consensus       420 ~~~~~d~e~~~~~~~~l~~~~~~~~~i~  447 (454)
                         ....++..++..+++.+|+..+.++
T Consensus       382 ---v~f~dLKg~Le~~l~~lG~~~~rfr  406 (508)
T 3l4g_A          382 ---LTLGHLMGVLREFFTKLGITQLRFK  406 (508)
T ss_dssp             ---CCHHHHHHHHHHHHHTTTCCCCEEE
T ss_pred             ---CCHHHHHHHHHHHHHHcCCcceEee
Confidence               4667788888889999987555544


No 304
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A*
Probab=98.37  E-value=1.1e-06  Score=90.78  Aligned_cols=83  Identities=17%  Similarity=0.264  Sum_probs=65.7

Q ss_pred             eEeeCCCCCHHHHHHHHHcCC--CCceeeEeecCccccCCC-CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         362 IVTLPHDLRIPFARYLAQNGS--IVSMKRYCIDRVFRERRV-LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       362 ~~~Lr~d~T~p~aR~~a~~~~--~~~~k~~y~g~vfR~~~~-~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      ..+||+.++..+-..++.|.+  ..|+|+|++|+|||++.. +.++++||.|+++.++|.. .  .-.++..++..+|+.
T Consensus       180 ~svLRTsLlPgLL~~lr~N~~r~~~pvrLFEIG~VFr~d~~~d~th~~Ef~qLagli~G~~-v--df~dLKgilE~LL~~  256 (534)
T 2du3_A          180 TLTLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEE-L--SVDDGKAVAEALLRQ  256 (534)
T ss_dssp             EEEECSSHHHHHHHHHHTTTTTSCSSEEEEEEEEEECCCTTCSSSCCSEEEEEEEEEECSS-C--CHHHHHHHHHHHHGG
T ss_pred             ccccCccchhhHHHHHHHHHhCCCCCeeEEEEeeEEecCccccccccceeeEEEEEEECCC-C--CHHHHHHHHHHHHHH
Confidence            489999999977766665422  578999999999998766 6778999999999999974 2  246677888888888


Q ss_pred             CCCCCcEEE
Q psy7309         439 FNYGNISFA  447 (454)
Q Consensus       439 ~~~~~~~i~  447 (454)
                      +|+.++.++
T Consensus       257 LGi~~~r~~  265 (534)
T 2du3_A          257 FGFENFRFR  265 (534)
T ss_dssp             GTCCEEEEE
T ss_pred             cCCCeEEEE
Confidence            987655554


No 305
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A*
Probab=98.35  E-value=2.9e-06  Score=86.48  Aligned_cols=102  Identities=16%  Similarity=0.143  Sum_probs=75.4

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceeeE
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKRY  389 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~  389 (454)
                      ..+.+|.+|...+++.|..+||.+|+||+|...+.-  +..+.|.+ +--|+.+.||----+-.-+.++.     .-|+|
T Consensus       130 ~~~r~Rs~i~~~iR~ff~~~gFlEVeTPiL~~s~~e--G~~~~F~~-~~~g~~~~L~~SpqLylq~l~~g-----~~rvf  201 (435)
T 2xgt_A          130 ALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVE--GGSTLFNL-DYFGEQSFLTQSSQLYLETCIPT-----LGDVF  201 (435)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCSS--CTTSCCEE-EETTEEEEECSCSHHHHHHHHHH-----HCSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCeEeeccCC--Cchhceee-ccCCcccccCCChHHHHHHhhhc-----cCceE
Confidence            556689999999999999999999999999766542  22345554 45678888884433333333432     23999


Q ss_pred             eecCccccCCCCC-CccceEEEEEEEEEcCC
Q psy7309         390 CIDRVFRERRVLG-FHPRELYECAFDIVTNT  419 (454)
Q Consensus       390 y~g~vfR~~~~~~-g~~rE~~Q~g~eiig~~  419 (454)
                      +||+|||.+.... -|+-||+|+++|..+.+
T Consensus       202 eIg~~FR~E~~~t~RH~~EFT~lE~e~af~d  232 (435)
T 2xgt_A          202 CIAQSYRAEKSRTRRHLAEYAHVEAECPFIT  232 (435)
T ss_dssp             EEEEEECCCSSCCTTCCSEEEEEEEEEESCC
T ss_pred             EEecceecCCCCccccccceeEEEEEEecCC
Confidence            9999999987554 34559999999999865


No 306
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A*
Probab=98.23  E-value=7.1e-06  Score=83.42  Aligned_cols=103  Identities=16%  Similarity=0.108  Sum_probs=78.6

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceeeE
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKRY  389 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~  389 (454)
                      +.+.+|..|...+++.|..+||.+|+||+|...+.  .+..++|.+. --|+.+.|+..--+-.-|.++.    ..-|+|
T Consensus       135 ~~~~~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~~~--eg~~~~f~~~-~~~~~~yL~~Spql~~q~l~~~----g~~rvf  207 (438)
T 3nem_A          135 AIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATAT--EGGTELFPMK-YFEEDAFLAQSPQLYKQIMMAS----GLDRVY  207 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCS--SCSSSCCEEE-ETTEEEEECSCSHHHHHHGGGT----TCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcEEEeCCEEecCCC--CCCccceeEe-eCCccEEEecChHHHHHHHHhc----CCCceE
Confidence            44568999999999999999999999999988753  2233566553 3477789996665555555542    234999


Q ss_pred             eecCccccCCCCCC-ccceEEEEEEEEEcCC
Q psy7309         390 CIDRVFRERRVLGF-HPRELYECAFDIVTNT  419 (454)
Q Consensus       390 y~g~vfR~~~~~~g-~~rE~~Q~g~eiig~~  419 (454)
                      +||+|||.+....+ |.-||+|+++|..+.+
T Consensus       208 ~i~~~FR~E~~~t~RH~pEFt~le~e~a~~~  238 (438)
T 3nem_A          208 EIAPIFRAEEHNTTRHLNEAWSIDSEMAFIE  238 (438)
T ss_dssp             EEEEEECCCSSCCTTCCSEEEEEEEEEESCS
T ss_pred             EEcceEECCCCCCcccccceeeeeeeeccCc
Confidence            99999999876544 5569999999999875


No 307
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A*
Probab=98.02  E-value=4.3e-05  Score=73.82  Aligned_cols=121  Identities=14%  Similarity=0.128  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHHhcCCccccCCCccccc----cc-cccc------cccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCC
Q psy7309         314 LLESTGDKLRRIFQLHGGAHFQTPLLTPLN----SL-TATS------ETTASVMTRGGSIVTLPHDLRIPFARYLAQNGS  382 (454)
Q Consensus       314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~~----~~-~~~~------~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~  382 (454)
                      -..++.+.|+++|...||.++.+|.+++..    .+ ....      .+.+.+.    +..+||+-++..+.|.++.|.+
T Consensus        54 ~~~~~~~~iR~~l~~~Gf~Ev~~s~l~~~~~nf~~l~~~~~~par~~~d~~~l~----e~~vLRtsl~p~ll~~l~~N~~  129 (294)
T 2rhq_A           54 PLTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYIT----DEILMRTHTSPVQARTMEKRNG  129 (294)
T ss_dssp             HHHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTGGGTCCTTCGGGCTTTSCBSS----SSEEECSSSHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHCCCEEEcCcceeeehhhHHhhCCCCCccccccCCcEEEc----CcceeeccCHHHHHHHHHhcCC
Confidence            367889999999999999999999887742    22 1111      1234442    5679999999999999998743


Q ss_pred             CCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhC-CC
Q psy7309         383 IVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRF-NY  441 (454)
Q Consensus       383 ~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~-~~  441 (454)
                      ..+.|+|.+|+|||.+.....+..||.|.+.=+.|..   ..-.++..++..+++.+ |+
T Consensus       130 ~~~~riFEiG~Vfr~d~~d~~h~~Ef~~Le~~~~g~~---~df~dlKg~le~ll~~l~g~  186 (294)
T 2rhq_A          130 QGPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKN---IKMSDLKGTLELVAKKLFGA  186 (294)
T ss_dssp             CSCEEEEEEEEEECCCCCBTTBCSEEEEEEEEEEESS---CCHHHHHHHHHHHHHHHHCT
T ss_pred             CCCccEEEEcCEEecCCCCCCCCChhhEEEEEEECCC---CCHHHHHHHHHHHHHHHhCC
Confidence            4789999999999975423345569999998888864   12234444555566666 75


No 308
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii}
Probab=98.01  E-value=1.8e-05  Score=81.65  Aligned_cols=82  Identities=17%  Similarity=0.238  Sum_probs=62.2

Q ss_pred             eEeeCCCCCHHHHHHHHHcC--CCCceeeEeecCccccCCC-CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         362 IVTLPHDLRIPFARYLAQNG--SIVSMKRYCIDRVFRERRV-LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       362 ~~~Lr~d~T~p~aR~~a~~~--~~~~~k~~y~g~vfR~~~~-~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      ..+||+.++..+...++.|.  +..|+|+|++|+|||.+.. ...+++||.|.+.-++|..   ....++..++-.+|+.
T Consensus       192 ~svLRTsLlPGLL~~vr~N~~r~~~pvrlFEiGrVFr~D~~~d~th~~ef~qLaglv~G~~---vdF~DLKG~Le~ll~~  268 (549)
T 2du7_A          192 TLTLRSHMTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQREDRSHLMSYHSASCVVVGED---VSVDDGKVVAEGLLAQ  268 (549)
T ss_dssp             EEECCSTTHHHHHHHHHTTTTTSCSSEEEEEEEEECCCCSSCSSSCCSCEEEEEEEEECTT---CCHHHHHHHHHHHHGG
T ss_pred             ccccccccchhHHHHHHHHHhcCCCCeEEEEEeeEEecCCcccCcCCCcceEEEEEEECCC---CCHHHHHHHHHHHHHH
Confidence            57899999997766666542  1579999999999997653 4567899999999999974   3456677777778888


Q ss_pred             CCCCCcEE
Q psy7309         439 FNYGNISF  446 (454)
Q Consensus       439 ~~~~~~~i  446 (454)
                      +|+..+.+
T Consensus       269 LGi~~~rf  276 (549)
T 2du7_A          269 FGFTKFKF  276 (549)
T ss_dssp             GTCCCCCC
T ss_pred             cCCCeEEE
Confidence            88643433


No 309
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A*
Probab=97.98  E-value=2e-05  Score=76.62  Aligned_cols=134  Identities=9%  Similarity=-0.016  Sum_probs=101.6

Q ss_pred             HHHHHHHHHHHHHHHhcCCccccCCCcccccccccc------ccccEEEEcCC------------------------CCe
Q psy7309         313 SLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTAT------SETTASVMTRG------------------------GSI  362 (454)
Q Consensus       313 ~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~------~~~~~~~~d~~------------------------G~~  362 (454)
                      .+++.|.+-+++ -..+||++|.+|.+.+.+.+..+      .+++|.+..-.                        +..
T Consensus        65 ~L~~aLe~~~~~-~~~~Gy~ev~~P~lv~~~~~e~SGhl~~F~e~mf~v~~~~~d~~e~~~ll~~~~~~~~~~~~l~~~d  143 (346)
T 3mf2_A           65 SIVERLAALITS-HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHGTEREINAAVSRFDAGGDWTTSLSPAD  143 (346)
T ss_dssp             HHHHHHHHHHHH-TCCTTCEEEECCSEEEHHHHHHTTHHHHCGGGCEEEEEECSCHHHHHHHHHHHHTTSCGGGGEEEEE
T ss_pred             HHHHHHHHHHHh-hHhcCCeEEECCCccCHHHHHhcCCcccChhhcceeecccccchhhhhhhhhhccccccccccCCCC
Confidence            366667777777 77889999999999999987653      26788764322                        347


Q ss_pred             EeeCCCCCHHHHHHHHHc--CCCCceeeEeecCccccCCC-CCCccceEEEEEEEEEcCCCC-cccHHHHHHHHHHHHHh
Q psy7309         363 VTLPHDLRIPFARYLAQN--GSIVSMKRYCIDRVFRERRV-LGFHPRELYECAFDIVTNTPG-VLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       363 ~~Lr~d~T~p~aR~~a~~--~~~~~~k~~y~g~vfR~~~~-~~g~~rE~~Q~g~eiig~~~~-~~~d~e~~~~~~~~l~~  438 (454)
                      ++|.|=.-+|+.-++...  -...|+|+..+|.|||++.. +--|.+||.|..+=+++.... ...-.+++.++.++|+.
T Consensus       144 ~~LiPtacvpl~~~~~~eg~i~~~plr~~~~g~CFR~EaS~GL~RvhqF~kvE~v~~~tpEqs~~e~e~l~~~ae~il~~  223 (346)
T 3mf2_A          144 LVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARD  223 (346)
T ss_dssp             EEECSSSSTTHHHHHHTTCSCCTTCEEEEEEEEEECCCCCSSTTSCSEEEEEEEEEEESHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcccccHHHHHHHccCCcccccCeEEEEECCccCCcCCCCCeeeeeeEEEEEEEEeCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999887742  11458899999999999763 336778999988888886422 22344578899999999


Q ss_pred             CCCCCcEEEc
Q psy7309         439 FNYGNISFAP  448 (454)
Q Consensus       439 ~~~~~~~i~i  448 (454)
                      ||+ .|.+.+
T Consensus       224 LgL-pyrv~~  232 (346)
T 3mf2_A          224 LGL-TFRVDY  232 (346)
T ss_dssp             TTC-CCEEEE
T ss_pred             CCC-CEEEEE
Confidence            999 577765


No 310
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=97.97  E-value=3.3e-05  Score=78.88  Aligned_cols=102  Identities=12%  Similarity=0.087  Sum_probs=75.2

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceeeE
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKRY  389 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~  389 (454)
                      +.+.+|..|...+++.|..+||.+|+||+|...+.-  +..+.|.+ |--|+...|+----+-.-+.++.     --|+|
T Consensus       154 ~~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~s~~e--Gg~~~f~~-~~~~~~~~L~~SpqL~lq~l~~g-----~~rVy  225 (456)
T 3m4p_A          154 QVLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCE--GGSTLFKL-QYFNEPAYLTQSSQLYLESVIAS-----LGKSF  225 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEEC--------CCCCEE-EETTEEEEECSCCHHHHHTTHHH-----HSSEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEeCCeeecCCCC--Cccccccc-cccCCCcccccCHHHHHHHHHhc-----cCcEE
Confidence            445689999999999999999999999999665432  22345543 55577788887776666665552     23999


Q ss_pred             eecCccccCCCC-CCccceEEEEEEEEEcCC
Q psy7309         390 CIDRVFRERRVL-GFHPRELYECAFDIVTNT  419 (454)
Q Consensus       390 y~g~vfR~~~~~-~g~~rE~~Q~g~eiig~~  419 (454)
                      +||+|||.+... .-|.-||+|+.+|..+.+
T Consensus       226 eig~~FR~E~~~t~rH~pEFtmlE~e~af~d  256 (456)
T 3m4p_A          226 CMLSSYRAEQSRTVRHLAEYLHLEAELPFIS  256 (456)
T ss_dssp             EEEEEECCCSCCCSSCCSEEEEEEEEEESCC
T ss_pred             EEEhheecCCCCCCcchHHHHHhHHHHhcCC
Confidence            999999997643 345569999999998864


No 311
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B*
Probab=97.93  E-value=1.3e-05  Score=82.10  Aligned_cols=138  Identities=13%  Similarity=0.017  Sum_probs=90.3

Q ss_pred             chhhHHHHHHHHHHHHH-H-HhcCCccccCCCcccccccccc-c----------cc----------cEEEE-cCCCCeEe
Q psy7309         309 SANFSLLESTGDKLRRI-F-QLHGGAHFQTPLLTPLNSLTAT-S----------ET----------TASVM-TRGGSIVT  364 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~-f-~~~G~~~i~tp~le~~~~~~~~-~----------~~----------~~~~~-d~~G~~~~  364 (454)
                      |.-..+++.|++.+.+- | .+.|+.+|+||.+.|.+++..+ .          ++          ++.++ +..++.+.
T Consensus        59 P~G~~l~~~i~~~~~~~~~~~~~g~~ev~tp~l~~~~~~~~s~~g~~~r~d~~~e~~~~~g~~~eem~~~~~~~~~~~~~  138 (454)
T 1g5h_A           59 PLGVELRKNLASQWWSSMVVFREQVFAVDSLHQEPGSSQPRDSAFRLVSPESIREILQDREPSKEQLVAFLENLLKTSGK  138 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCTTEEECCCCSEECCCCSSCCCCCEEECHHHHHHHHCC---CHHHHHHHHHHHHHHSCE
T ss_pred             chHHHHHHHHHHHHHHHHhhhcCCeEEEEcCccCChhhccccccCcccHHHHHHHHhhccCCCHHHHHHHHHhhcCccee
Confidence            77888999999988877 4 6999999999999998866432 0          11          11111 11235689


Q ss_pred             eCCCCCHHHH--HH---HHHcCCCCceeeEeecCcccc---C-CCCC--CccceEEEEEEEEEcCCCCc-ccHHHHHHHH
Q psy7309         365 LPHDLRIPFA--RY---LAQNGSIVSMKRYCIDRVFRE---R-RVLG--FHPRELYECAFDIVTNTPGV-LTMGSLRRCL  432 (454)
Q Consensus       365 Lr~d~T~p~a--R~---~a~~~~~~~~k~~y~g~vfR~---~-~~~~--g~~rE~~Q~g~eiig~~~~~-~~d~e~~~~~  432 (454)
                      ||| .|.|..  -+   +-.....+|++++++|+|||.   + .+..  -|.|||.|...+++-..... ..-..++...
T Consensus       139 LRP-eta~g~~~~f~~~~~s~r~~LP~~~aqig~~fR~~~nE~s~~~Gl~R~REF~q~E~~~F~~pe~~~e~~~~~~~~~  217 (454)
T 1g5h_A          139 LRA-TLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEASLVWFTPTRTSSQWLDFWLRHR  217 (454)
T ss_dssp             ECS-CSHHHHHHTHHHHHHHTTTBSCEEEEEEEEEEEEEC---------CEEEEEEEEEEEEEECHHHHHHHHHHHHHHH
T ss_pred             ecc-cccHHHHHHHhhhHhhcccCCCEEEEEeeeeccCCcccccCCCCccccCceehhheEEEeCHhhHHHHHHHHHHHH
Confidence            999 676432  22   112222689999999999993   4 2334  37899999999988653111 1222356777


Q ss_pred             HHHHHhCCCCCcEEE
Q psy7309         433 MGSFRRFNYGNISFA  447 (454)
Q Consensus       433 ~~~l~~~~~~~~~i~  447 (454)
                      .+++..||+....++
T Consensus       218 ~~~~~~lgi~~~~~r  232 (454)
T 1g5h_A          218 LLWWRKFAMSPSNFS  232 (454)
T ss_dssp             HHHHHTTCSSGGGEE
T ss_pred             HHHHHHcCCCceeEE
Confidence            889999999644443


No 312
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens}
Probab=97.93  E-value=8.1e-05  Score=77.31  Aligned_cols=104  Identities=13%  Similarity=0.138  Sum_probs=79.2

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEE-cCCCCeEeeCCCCCHHHHHHHHHcCCCCceee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVM-TRGGSIVTLPHDLRIPFARYLAQNGSIVSMKR  388 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~-d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~  388 (454)
                      ..+.+|..|...+++.|..+||.+|+||+|.+...  ....+.|.+- +.-|..+.||----+-.-|.++.    .--|+
T Consensus       174 ~~~r~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~~g--Ga~a~~F~t~~~~~~~~~yL~~SpqL~lk~liv~----g~~rV  247 (521)
T 3bju_A          174 QKFIIRSKIITYIRSFLDELGFLEIETPMMNIIPG--GAVAKPFITYHNELDMNLYMRIAPELYHKMLVVG----GIDRV  247 (521)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCC--SSSCCCCEEEETTTTEEEEECSCSHHHHHHHHHT----TCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEeCceeeccCC--CccccceeeecccCCcceEeeCCHHHHHHHHHhc----CcCce
Confidence            55668999999999999999999999999986531  1123566553 44688889996555555555552    23499


Q ss_pred             EeecCccccCCCCCCccceEEEEEEEEEcCC
Q psy7309         389 YCIDRVFRERRVLGFHPRELYECAFDIVTNT  419 (454)
Q Consensus       389 ~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~  419 (454)
                      |+||+|||.+....-|.-||+|+.++....+
T Consensus       248 yeig~~FR~E~~~trH~pEFtmlE~e~af~d  278 (521)
T 3bju_A          248 YEIGRQFRNEGIDLTHNPEFTTCEFYMAYAD  278 (521)
T ss_dssp             EEEEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred             EEEEcceeCCCCCCccchhhhhhhhhhhcCC
Confidence            9999999998766677789999999998864


No 313
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis}
Probab=97.92  E-value=8.8e-05  Score=76.80  Aligned_cols=104  Identities=15%  Similarity=0.152  Sum_probs=78.7

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEE-EcCCCCeEeeCCCCCHHHHHHHHHcCCCCceee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASV-MTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKR  388 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~-~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~  388 (454)
                      ..+.+|..|...+++.|..+||.+|+||+|.+..  .....+.|.. .+.-|..+.||----+-.-|.++..    --|+
T Consensus       202 ~~fr~Rs~i~~~iR~ff~~~gFlEVeTPiL~~~~--gGA~a~pF~t~~n~~~~~~yL~~SpqLylk~L~v~G----~~rV  275 (529)
T 4ex5_A          202 TTFRARTKAIASIRKFMGDADFMEVETPMLHPIP--GGAAAKPFVTHHNALDMEMFLRIAPELYLKRLIVGG----FERV  275 (529)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSC--CSSSSCCCEEEETTTTEEEEECSCSHHHHHHHHHTT----CSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEeCCeeeccC--CCCcccccccccccCCcceecccCHHHHHHHHHhcC----CCcE
Confidence            5567899999999999999999999999998542  1111245543 3556777888865555555655532    3499


Q ss_pred             EeecCccccCCCCCCccceEEEEEEEEEcCC
Q psy7309         389 YCIDRVFRERRVLGFHPRELYECAFDIVTNT  419 (454)
Q Consensus       389 ~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~  419 (454)
                      |+||+|||.+....-|.-||+|+.++.-..+
T Consensus       276 yeIg~~FR~E~~~~rH~pEFtmlE~e~af~d  306 (529)
T 4ex5_A          276 FEINRNFRNEGVSPRHNPEFTMMEFYAAYTD  306 (529)
T ss_dssp             EEEEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred             EEeehheecCCCCCCcccHhHhhhhhhhcCC
Confidence            9999999998776777889999999998754


No 314
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A*
Probab=97.92  E-value=8.1e-05  Score=78.45  Aligned_cols=103  Identities=17%  Similarity=0.184  Sum_probs=73.2

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEE--cCCCCeEeeCCCCCHHHHHHHHHcCCCCcee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVM--TRGGSIVTLPHDLRIPFARYLAQNGSIVSMK  387 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~--d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k  387 (454)
                      ..+.+|..|...+++.|..+||.+|+||+|...+.-.  . +-|.+-  ...|.-.+||---=+-.-|.++.    .--|
T Consensus       136 ~~l~~Rs~i~~~iR~fl~~~gFlEVeTPiL~~s~~eG--A-r~F~v~~~~~~~~~y~L~qSPQl~kq~Lmv~----G~~r  208 (585)
T 1c0a_A          136 QRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEG--A-RDYLVPSRVHKGKFYALPQSPQLFKQLLMMS----GFDR  208 (585)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--S-CCCEEECSSSTTCEEECCSCSHHHHHHHHHT----TCCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--C-ccceecccccCCceEeCccCHHHHHHHHHhc----CCCc
Confidence            4456899999999999999999999999998654221  1 224432  23577777884433333444442    2349


Q ss_pred             eEeecCccccCCCCCCccceEEEEEEEEEcCC
Q psy7309         388 RYCIDRVFRERRVLGFHPRELYECAFDIVTNT  419 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~  419 (454)
                      +|+||+|||.+.....|.=||+|+.+|.-..+
T Consensus       209 vfqI~~~FR~E~~~t~r~pEFT~lE~e~af~d  240 (585)
T 1c0a_A          209 YYQIVKCFRDEDLRADRQPEFTQIDVETSFMT  240 (585)
T ss_dssp             EEEEEEEECCCCCBTTBCSEEEEEEEEEESCC
T ss_pred             eEEEeceeecCCCCCCcCcccceeeeeecCCC
Confidence            99999999997755444339999999998864


No 315
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A
Probab=97.89  E-value=8.2e-05  Score=78.21  Aligned_cols=103  Identities=15%  Similarity=0.162  Sum_probs=72.8

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEc--CCCCeEeeCCCCCHHHHHHHHHcCCCCcee
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMT--RGGSIVTLPHDLRIPFARYLAQNGSIVSMK  387 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d--~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k  387 (454)
                      ..+.+|.+|...+++.|..+||.+|+||+|...+.-.  . +-|.+--  ..|.-.+||----+-.-|.++.    .--|
T Consensus       142 ~~l~~Rs~i~~~iR~fl~~~gF~EVeTPiL~~s~~eG--A-r~F~v~~~~~~~~~y~L~qSPQl~kq~Lmv~----G~~r  214 (580)
T 1l0w_A          142 ENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEG--A-RDFLVPYRHEPGLFYALPQSPQLFKQMLMVA----GLDR  214 (580)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--S-CCCEEECTTSTTEEEECCSCSHHHHHHHHHT----TCSE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--C-CCccccccccCCceeECccCHHHHHHHHHHh----ccCC
Confidence            4456899999999999999999999999998654321  1 2244322  3466677885433333443442    2349


Q ss_pred             eEeecCccccCCCCCCccceEEEEEEEEEcCC
Q psy7309         388 RYCIDRVFRERRVLGFHPRELYECAFDIVTNT  419 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~  419 (454)
                      +|+||+|||.+.....|.=||+|+.+|.-..+
T Consensus       215 vfqI~~~FR~E~~~~~r~pEFT~lE~e~af~d  246 (580)
T 1l0w_A          215 YFQIARCFRDEDLRADRQPDFTQLDLEMSFVE  246 (580)
T ss_dssp             EEEEEEEECCCCCCSSCCSEEEEEEEEEESCC
T ss_pred             eEEEeceeeCCCCCCCcCCCccceeeeecCCC
Confidence            99999999997765544339999999998865


No 316
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=97.81  E-value=5.1e-05  Score=73.93  Aligned_cols=117  Identities=16%  Similarity=0.121  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHHHHhcCCccccCCCccccc-cccc---cc-------cccEEEEcCCCCeEeeCCCCCHHHHHHHHHcC
Q psy7309         313 SLLESTGDKLRRIFQLHGGAHFQTPLLTPLN-SLTA---TS-------ETTASVMTRGGSIVTLPHDLRIPFARYLAQNG  381 (454)
Q Consensus       313 ~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~-~~~~---~~-------~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~  381 (454)
                      .-...+.++|+++|...||.++.+|.++... .|..   ..       ..+|.+ +   +..+||..++....|.++.+ 
T Consensus       107 hp~~~~~~~Ir~if~~~Gf~ev~~~~ve~~~~nFd~Ln~p~dhpaR~~~dt~~i-~---e~~vLRThtsp~~lr~l~~~-  181 (327)
T 3pco_A          107 HPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF-D---TTRLLRTQTSGVQIRTMKAQ-  181 (327)
T ss_dssp             CHHHHHHHHHHHHHHTTTCBCCCCCSEECTCCCCCTTTCCSSSHHHHHTTCCBS-S---SSCEECSCTHHHHHHHHTTC-
T ss_pred             CHHHHHHHHHHHHHHHCCCeEEECCCccCCHHHHHhhCCCCCChhhcccccEEe-C---CCceecccCCHHHHHHHHhC-
Confidence            3577899999999999999999999986532 1211   00       123333 2   45799999999999998764 


Q ss_pred             CCCceeeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhC
Q psy7309         382 SIVSMKRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRF  439 (454)
Q Consensus       382 ~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~  439 (454)
                       ..|+|.|.+|+|||.+ ....|.-+|.|...=++|..   ..-.++-.++-.+++.+
T Consensus       182 -~~pirifeiGrVyR~d-~d~th~p~fhqlegl~v~~~---v~f~dLKg~Le~~l~~l  234 (327)
T 3pco_A          182 -QPPIRIIAPGRVYRND-YDQTHTPMFHQMEGLIVDTN---ISFTNLKGTLHDFLRNF  234 (327)
T ss_dssp             -CSSCCBCCEECCBCSC-CBTTBCSBCCEEEEEEEETT---CCHHHHHHHHHHHHHHH
T ss_pred             -CCCeeEEeeccEEecC-CCcccCCcccEEEEEEECCC---CCHHHHHHHHHHHHHHH
Confidence             4799999999999986 34566678999866667654   22334444555555555


No 317
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens}
Probab=97.74  E-value=0.00035  Score=73.51  Aligned_cols=118  Identities=15%  Similarity=0.140  Sum_probs=84.1

Q ss_pred             hhhHHHHHHHHHHHHHHH-hcCCccccCCCccccccccccccccEEEE-cCCCCeEeeCCCCCHHHHHHHHHcCCCCcee
Q psy7309         310 ANFSLLESTGDKLRRIFQ-LHGGAHFQTPLLTPLNSLTATSETTASVM-TRGGSIVTLPHDLRIPFARYLAQNGSIVSMK  387 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~-~~G~~~i~tp~le~~~~~~~~~~~~~~~~-d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k  387 (454)
                      ..+.+|..|...+++.|. .+||.+|+||+|...+.-   +.+.|.+- ...|+-+.|+----+-.-+.++.    .--|
T Consensus       146 ~~lr~Rs~i~~~iR~f~~~~~gF~EVeTPiL~~st~~---GA~~F~v~~~~~g~~~~L~qSpql~kq~l~v~----g~~r  218 (617)
T 4ah6_A          146 YNLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPG---GAKEFLVPSREPGKFYSLPQSPQQFKQLLMVG----GLDR  218 (617)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCCEECCCCSSBCCCCS---SSCCCEEECSSTTCEEECCSSTTHHHHHHHHT----SCSE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEeCCeeccCCCC---CCcCceeccccCCcccccccCHHHHHHHHHhc----ccCc
Confidence            445689999999999996 799999999999754321   12334442 23577788885443333344442    2349


Q ss_pred             eEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHhC
Q psy7309         388 RYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRRF  439 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~~  439 (454)
                      +|+||+|||.+.....|.-||+|..+|.-..+     ..+++.++-+.+..+
T Consensus       219 vfqi~~~FR~E~~~t~r~pEFt~lE~e~af~d-----~~d~m~~~E~l~~~~  265 (617)
T 4ah6_A          219 YFQVARCYRDEGSRPDRQPEFTQIDIEMSFVD-----QTGIQSLIEGLLQYS  265 (617)
T ss_dssp             EEEEEEEECCCSSCSSSCSEEEEEEEEEESCC-----HHHHHHHHHHHHHHH
T ss_pred             EEEEEhheecccCCCCcCcceecceeeecCCC-----HHHHHHHHHHHHHHH
Confidence            99999999998777777889999999998864     455666666666554


No 318
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica}
Probab=97.70  E-value=0.00014  Score=75.42  Aligned_cols=101  Identities=15%  Similarity=0.088  Sum_probs=64.0

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCccccCCCccccccccccccccEEEEcCCCCeEeeCCCCCHHHHHHHHHcCCCCceeeE
Q psy7309         310 ANFSLLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLPHDLRIPFARYLAQNGSIVSMKRY  389 (454)
Q Consensus       310 ~~~~~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~~~~~~~k~~  389 (454)
                      ..+.+|..|...+++.|..+||.+|+||+|.....-  ...+.|.+ +--|..+.|+----+-.-|.++.    ..-|+|
T Consensus       242 ~~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~e--gga~~F~v-~~~~~~~yL~~Spql~~k~ll~~----g~~rVf  314 (548)
T 3i7f_A          242 AIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSSE--GGSNIFEV-KYFDRKAYLAQSPQLYKQMAIMG----DFRKVF  314 (548)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCEECCCCSBC----------------------CCBCSCTHHHHHHHHTT----TCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEeCCEEecccCC--CCcceeEE-ecCCCceEeccCHHHHHHHHHhc----CcCcEE
Confidence            445689999999999999999999999999887632  22345543 33455567775544444455542    235999


Q ss_pred             eecCccccCCCC-CCccceEEEEEEEE-Ec
Q psy7309         390 CIDRVFRERRVL-GFHPRELYECAFDI-VT  417 (454)
Q Consensus       390 y~g~vfR~~~~~-~g~~rE~~Q~g~ei-ig  417 (454)
                      +||+|||.+... .-|.-||+|..+|. ++
T Consensus       315 eI~~~FR~E~~~t~RHl~EFtmlE~e~af~  344 (548)
T 3i7f_A          315 EVGPVFRAENSNTRRHLTEFEGLDIEMEIV  344 (548)
T ss_dssp             EEEEECCCSCCCSSSCCSCEEEEEEEEECS
T ss_pred             EEeeeEecCCCCCCCcchhhhchhhhhhhh
Confidence            999999987643 34567999999996 45


No 319
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=97.66  E-value=0.00039  Score=72.36  Aligned_cols=83  Identities=17%  Similarity=0.229  Sum_probs=60.8

Q ss_pred             eEeeCCCCCHHHHHHHHHcC--CCCceeeEeecCccccCCC-CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         362 IVTLPHDLRIPFARYLAQNG--SIVSMKRYCIDRVFRERRV-LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       362 ~~~Lr~d~T~p~aR~~a~~~--~~~~~k~~y~g~vfR~~~~-~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      ..+||+.++..+...++.|.  +..|+|+|.+|+|||.+.. ...++.||.|.+.=++|..   ..-.++-.++-.+|+.
T Consensus       199 ~sVLRTsLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~---vdF~DLKGvLE~LL~~  275 (648)
T 2odr_B          199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEG---VDINDGKAIAEGLLSQ  275 (648)
T ss_dssp             SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTT---CCHHHHHHHHHHHHHT
T ss_pred             cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCC---CCHHHHHHHHHHHHHH
Confidence            57899999996666655542  1589999999999997543 3456789999999999974   2234556666677788


Q ss_pred             CCCCCcEEE
Q psy7309         439 FNYGNISFA  447 (454)
Q Consensus       439 ~~~~~~~i~  447 (454)
                      +|+..+.++
T Consensus       276 LGi~~vrfr  284 (648)
T 2odr_B          276 FGFTNFKFI  284 (648)
T ss_dssp             TTCCCEEEE
T ss_pred             cCCCeEEEE
Confidence            887555554


No 320
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=97.65  E-value=0.00041  Score=72.34  Aligned_cols=83  Identities=17%  Similarity=0.229  Sum_probs=60.8

Q ss_pred             eEeeCCCCCHHHHHHHHHcC--CCCceeeEeecCccccCCC-CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         362 IVTLPHDLRIPFARYLAQNG--SIVSMKRYCIDRVFRERRV-LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       362 ~~~Lr~d~T~p~aR~~a~~~--~~~~~k~~y~g~vfR~~~~-~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      ..+||+.++..+...++.|.  +..|+|+|.+|+|||.+.. ...++.||.|.+.=++|..   ..-.++-.++-.+|+.
T Consensus       199 ~sVLRTSLlPGLL~~lr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~---vdF~DLKGvLE~LL~~  275 (665)
T 2odr_A          199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEG---VDINDGKAIAEGLLSQ  275 (665)
T ss_dssp             SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTT---CCHHHHHHHHHHHHHT
T ss_pred             cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCC---CCHHHHHHHHHHHHHH
Confidence            57899999996666655542  1589999999999997543 3456789999999999974   2234556666677788


Q ss_pred             CCCCCcEEE
Q psy7309         439 FNYGNISFA  447 (454)
Q Consensus       439 ~~~~~~~i~  447 (454)
                      +|+..+.++
T Consensus       276 LGi~~vrfr  284 (665)
T 2odr_A          276 FGFTNFKFI  284 (665)
T ss_dssp             TTCCCEEEE
T ss_pred             cCCCeEEEE
Confidence            887555554


No 321
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=97.64  E-value=0.00042  Score=72.35  Aligned_cols=83  Identities=17%  Similarity=0.229  Sum_probs=60.8

Q ss_pred             eEeeCCCCCHHHHHHHHHcC--CCCceeeEeecCccccCCC-CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         362 IVTLPHDLRIPFARYLAQNG--SIVSMKRYCIDRVFRERRV-LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       362 ~~~Lr~d~T~p~aR~~a~~~--~~~~~k~~y~g~vfR~~~~-~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      ..+||+.++..+...++.|.  +..|+|+|.+|+|||.+.. ...++.||.|.+.=++|..   ..-.++-.++-.+|+.
T Consensus       199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~---vDF~DLKGvLE~LL~~  275 (685)
T 2odr_D          199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEG---VDINDGKAIAEGLLSQ  275 (685)
T ss_dssp             SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTT---CCHHHHHHHHHHHHHT
T ss_pred             cCcccccchhhHHHHHHHHHhCCCCCeEEEEeccEEecCccccccCCCcceEEEEEEECCC---CCHHHHHHHHHHHHHH
Confidence            57899999996666655542  1589999999999997543 3456789999999999974   2234556666677788


Q ss_pred             CCCCCcEEE
Q psy7309         439 FNYGNISFA  447 (454)
Q Consensus       439 ~~~~~~~i~  447 (454)
                      +|+..+.++
T Consensus       276 LGi~~vrfr  284 (685)
T 2odr_D          276 FGFTNFKFI  284 (685)
T ss_dssp             TTCCCEEEE
T ss_pred             cCCCeEEEE
Confidence            887555554


No 322
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis}
Probab=97.61  E-value=0.00046  Score=72.20  Aligned_cols=83  Identities=17%  Similarity=0.229  Sum_probs=60.8

Q ss_pred             eEeeCCCCCHHHHHHHHHcC--CCCceeeEeecCccccCCC-CCCccceEEEEEEEEEcCCCCcccHHHHHHHHHHHHHh
Q psy7309         362 IVTLPHDLRIPFARYLAQNG--SIVSMKRYCIDRVFRERRV-LGFHPRELYECAFDIVTNTPGVLTMGSLRRCLMGSFRR  438 (454)
Q Consensus       362 ~~~Lr~d~T~p~aR~~a~~~--~~~~~k~~y~g~vfR~~~~-~~g~~rE~~Q~g~eiig~~~~~~~d~e~~~~~~~~l~~  438 (454)
                      ..+||+.++..+...++.|.  +..|+|+|.+|+|||.+.. ...++.||.|.+.=++|..   ..-.++-.++-.+|+.
T Consensus       199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~EfhqLeGlv~G~~---vDF~DLKGvLE~LL~~  275 (701)
T 2odr_C          199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEG---VDINDGKAIAEGLLSQ  275 (701)
T ss_dssp             EEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTT---CCHHHHHHHHHHHHHT
T ss_pred             cCcccccchhhHHHHHHHHHhCCCCCeEEEEEeeEEccCccccccCCCcceEEEEEEECCC---CCHHHHHHHHHHHHHH
Confidence            56899999996666655542  1589999999999997543 3456789999999999974   2234556666677788


Q ss_pred             CCCCCcEEE
Q psy7309         439 FNYGNISFA  447 (454)
Q Consensus       439 ~~~~~~~i~  447 (454)
                      +|+..+.++
T Consensus       276 LGi~~vrfr  284 (701)
T 2odr_C          276 FGFTNFKFI  284 (701)
T ss_dssp             TTCCCEEEE
T ss_pred             cCCCeEEEE
Confidence            887555554


No 323
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis}
Probab=97.51  E-value=0.00092  Score=61.27  Aligned_cols=133  Identities=11%  Similarity=-0.035  Sum_probs=96.0

Q ss_pred             HHHHHHHHHHHHHhcCCccccCCCccccccccc----cccccEEEEcC-CCCeEeeCCCCCHHHHHHHHHcCC--CCcee
Q psy7309         315 LESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA----TSETTASVMTR-GGSIVTLPHDLRIPFARYLAQNGS--IVSMK  387 (454)
Q Consensus       315 ~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~----~~~~~~~~~d~-~G~~~~Lr~d~T~p~aR~~a~~~~--~~~~k  387 (454)
                      .+++.+++++.+...||.|+.|-+|...+.+..    .....+++.++ +-+.-+||+.+...+.+.++.|.+  ...+|
T Consensus         6 ~~~~~~~ir~~L~~~G~~Evitysf~s~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~~~   85 (213)
T 3ica_A            6 RYKWQTVVSEQLVGAGFNEILNNSLTAGSYYEGLKSHPREMAVELMNPLSQELNCMRQTLLFGGLETLSHNLRRKHLSLY   85 (213)
T ss_dssp             HHHHHHHHHHHHHHTTCEECCCCSEEEGGGGTTCSSSCGGGCCBCSSBSCSSEEEECSSSHHHHHHHHHHHHTTTCSEEE
T ss_pred             HHHHHHHHHHHHHHCCCceeeeccCCCHHHHhhhcccCcCCeEEecCCccHHHHHHHHHhHHHHHHHHHHHHcCCCCCee
Confidence            557888999999999999999999977664321    12356788887 566789999999999999987632  34589


Q ss_pred             eEeecCccccCCCC------CCccceEEEEEEEEEcCCC-------CcccHHH-HHHHHHHHHHhCCCC--CcEEE
Q psy7309         388 RYCIDRVFRERRVL------GFHPRELYECAFDIVTNTP-------GVLTMGS-LRRCLMGSFRRFNYG--NISFA  447 (454)
Q Consensus       388 ~~y~g~vfR~~~~~------~g~~rE~~Q~g~eiig~~~-------~~~~d~e-~~~~~~~~l~~~~~~--~~~i~  447 (454)
                      +|.+|+||+.+...      -+.++|....++=+.|...       +...|.. +-.++-.+|+.+|++  ++.++
T Consensus        86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~d~Kg~ve~ll~~lgi~~~~~~~~  161 (213)
T 3ica_A           86 LFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRVGIETGAYTLK  161 (213)
T ss_dssp             EEEEEEEEEEECCCC--CCSSCEEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             EEEeeeEEecCCccccccccccccchhhEEEEEEeCCCCcccCCCCCCCcCHHHHHHHHHHHHHHhCCCccceEEe
Confidence            99999999974311      1345788888887888420       2234544 444555678889986  46654


No 324
>3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis}
Probab=97.48  E-value=0.00085  Score=61.51  Aligned_cols=133  Identities=10%  Similarity=0.023  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHHhcCCccccCCCccccccccc----cccccEEEEcC-CCCeEeeCCCCCHHHHHHHHHcCC--CCcee
Q psy7309         315 LESTGDKLRRIFQLHGGAHFQTPLLTPLNSLTA----TSETTASVMTR-GGSIVTLPHDLRIPFARYLAQNGS--IVSMK  387 (454)
Q Consensus       315 ~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~~----~~~~~~~~~d~-~G~~~~Lr~d~T~p~aR~~a~~~~--~~~~k  387 (454)
                      .+++.+++++++...||.++.|-.|...+.+..    .....+++.++ +-+.-+||+.+...+.+.++.|.+  ..++|
T Consensus         6 ~~~~~~~ir~~l~~~G~~Evitysf~~~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~v~   85 (213)
T 3ig2_A            6 SNKLQNLVAEQLVGCGFNEILNNSLTRAAYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLK   85 (213)
T ss_dssp             HHHHHHHHHHHHHHTTCEECCCCSEECGGGGTTCSSSCGGGCEEBSSGGGCSCCEECSCSHHHHHHHHHHC------CCE
T ss_pred             HHHHHHHHHHHHHHCCCeEEeccccCCHHHHHhhcccCcCCeEEEeCCcchhHHHHHHHhHHHHHHHHHHHhcCCCCCee
Confidence            457888999999999999999999977665421    12457888887 556788999999999999998743  34689


Q ss_pred             eEeecCccccCCCC------CCccceEEEEEEEEEcCCC-------CcccHHHHHH-HHHHHHHhCCCC--CcEEE
Q psy7309         388 RYCIDRVFRERRVL------GFHPRELYECAFDIVTNTP-------GVLTMGSLRR-CLMGSFRRFNYG--NISFA  447 (454)
Q Consensus       388 ~~y~g~vfR~~~~~------~g~~rE~~Q~g~eiig~~~-------~~~~d~e~~~-~~~~~l~~~~~~--~~~i~  447 (454)
                      +|.+|+||+.+...      .+.++|....++=+.|...       +...|..-+. ++-.+|+.+|++  ++.++
T Consensus        86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~dlKg~ve~ll~~lg~~~~~~~~~  161 (213)
T 3ig2_A           86 FFEFGNCYHFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGLDLHSLVVG  161 (213)
T ss_dssp             EEEEEEEEEECC----------CEEEEEEEEEEEEEEECCSCC----CHHHHHHHHHHHHHHHHHTTBCGGGCEEE
T ss_pred             EEEeeeEEecCcccccccccccccchhHEEEEEEECCCccccCCCCCCCcCHHHHHHHHHHHHHHhCCCccceEEe
Confidence            99999999975311      1245788888887778310       1234555444 555577889986  46654


No 325
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=97.43  E-value=0.00074  Score=71.37  Aligned_cols=124  Identities=10%  Similarity=0.042  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHhcCCccccCCCcccccc----ccc--cccccEEEEcC-CCCeEeeCCCCCHHHHHHHHHcCC-CCce
Q psy7309         315 LESTGDKLRRIFQLHGGAHFQTPLLTPLNS----LTA--TSETTASVMTR-GGSIVTLPHDLRIPFARYLAQNGS-IVSM  386 (454)
Q Consensus       315 ~~~i~~~l~~~f~~~G~~~i~tp~le~~~~----~~~--~~~~~~~~~d~-~G~~~~Lr~d~T~p~aR~~a~~~~-~~~~  386 (454)
                      .+++.++++.+|...||.++.|..|...+.    +..  .....+++.++ +-+.-+||+.+...+.+.++.|.+ ..|+
T Consensus       393 ~~~~~~~ir~~l~~~Gf~Evitysf~s~~~~~~~l~~~~~~~~~v~L~NPis~e~svmRtsLlpgLL~~l~~N~~~~~~v  472 (589)
T 3l4g_B          393 LNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPL  472 (589)
T ss_dssp             HHHHHHHHHHHHHHTTCEECCCCSEECHHHHTGGGTSCTTSSCCCBBSSCSSGGGSEECSCSHHHHHHHHHHTTTSCSCE
T ss_pred             HHHHHHHHHHHHHHCCCEEEecCcccCHHHHHHHhCCCCCCCCeEEEcCCCchhHhHHHHHHHHHHHHHHHHHhcCCCce
Confidence            456788999999999999999999976542    211  12356788877 445579999999999999998743 3589


Q ss_pred             eeEeecCccccCCCCCCccceEEEEEEEEEcCCCCcccHHH-HHHHHHHHHHhCCCC
Q psy7309         387 KRYCIDRVFRERRVLGFHPRELYECAFDIVTNTPGVLTMGS-LRRCLMGSFRRFNYG  442 (454)
Q Consensus       387 k~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~~~~~d~e-~~~~~~~~l~~~~~~  442 (454)
                      |+|.+|+|||.+.....+.+|+.+.+.=+.|..    .+.+ +-.++-.+++.+|++
T Consensus       473 rlFEiG~Vf~~d~~~~~~~~e~~~la~~~~g~~----~~f~~lkg~le~ll~~lg~~  525 (589)
T 3l4g_B          473 KLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKN----PGFEIIHGLLDRIMQLLDVP  525 (589)
T ss_dssp             EEEEEEEEEEECTTSTTSEEEEEEEEEEEESSS----CCHHHHHHHHHHHHHHTTCC
T ss_pred             EEEEeeeEEecCCccccCCccccEEEEEEECCC----CCHHHHHHHHHHHHHHcCCC
Confidence            999999999976433345689999988788864    2344 334555677888885


No 326
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens}
Probab=97.36  E-value=0.00049  Score=69.94  Aligned_cols=124  Identities=11%  Similarity=-0.049  Sum_probs=82.2

Q ss_pred             chhhHHHHHHHHHHHHHHHh-cC-CccccCCCccccccccccccccEEEEcCCCCeEeeCCCCCHHHHHHHHHc-----C
Q psy7309         309 SANFSLLESTGDKLRRIFQL-HG-GAHFQTPLLTPLNSLTATSETTASVMTRGGSIVTLPHDLRIPFARYLAQN-----G  381 (454)
Q Consensus       309 ~~~~~~~~~i~~~l~~~f~~-~G-~~~i~tp~le~~~~~~~~~~~~~~~~d~~G~~~~Lr~d~T~p~aR~~a~~-----~  381 (454)
                      |.-+.+++.|.+.....|.. .| +.+|+||..+++....  --.-|+        +.||| +|.|..=..-.+     .
T Consensus       101 P~G~~l~~nl~~~w~~~~~~~~~~~~eV~tp~~~~~~~SG--H~d~~~--------~~LRP-eTaqg~~~nfk~~~~s~r  169 (459)
T 3ikl_A          101 PLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLP--GDSAFR--------GGLRE-NLLHGALEHYVNCLDLVN  169 (459)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSSCSCEECCCCSBCCSCCCS--SCSCCT--------TB-CS-CSHHHHHHHTTTTTGGGT
T ss_pred             CcHHHHHHHHHHHHHHHHhhccCceEeeccccccccccCc--chhhhc--------ceECC-CCChhHHHHHhhhhhhcc
Confidence            78888999999977777775 66 5569999955533211  011222        99999 465554221111     1


Q ss_pred             CCCceeeEeecCccccCC----CCC--CccceEEEEEEEEEcCCCC-cccHHHHHHHHHHHHHhCCCCC
Q psy7309         382 SIVSMKRYCIDRVFRERR----VLG--FHPRELYECAFDIVTNTPG-VLTMGSLRRCLMGSFRRFNYGN  443 (454)
Q Consensus       382 ~~~~~k~~y~g~vfR~~~----~~~--g~~rE~~Q~g~eiig~~~~-~~~d~e~~~~~~~~l~~~~~~~  443 (454)
                      ...|+|+..+|+|||++.    +..  -|-|||.|...+++-.+.. ...-..++..+.+++..||+..
T Consensus       170 ~~LP~~iaqig~~FR~E~g~~~~~~GL~RvrEFtq~E~~~F~~Pe~~~e~~~~~~~~~~~~~~~LGi~~  238 (459)
T 3ikl_A          170 KRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSP  238 (459)
T ss_dssp             TBSSEEEEEEEEEECCC----------CCCCEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHCSSG
T ss_pred             ccCCeEEEEEeeeeecccccccCCCCcccccceeeeeEEEEeChhHHHHHHHHHHHHHHHHHHHhCCCh
Confidence            157999999999999973    333  3569999999999876522 2223457778888999999964


No 327
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.30  E-value=0.00011  Score=68.30  Aligned_cols=28  Identities=21%  Similarity=0.205  Sum_probs=25.0

Q ss_pred             CcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          23 IIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        23 iiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      ++|+|++|.||+++.++.++|+|||.|.
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence            9999999999999876666799999876


No 328
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.25  E-value=0.00018  Score=67.54  Aligned_cols=30  Identities=27%  Similarity=0.268  Sum_probs=25.5

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      .+++|+|++|.|||++.++.+.|+||+.+.
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence            458999999999999865556799999875


No 329
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=97.05  E-value=0.0004  Score=68.47  Aligned_cols=31  Identities=23%  Similarity=0.377  Sum_probs=26.3

Q ss_pred             cCCcccCCCCCcEEEccCCC--eEEecccchhh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDH--VKIGDFGLATN   51 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~--vKL~DFGla~~   51 (454)
                      .+++|+|++|.|||++.++.  +.|+||+.|..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            36899999999999997753  68999998863


No 330
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=96.87  E-value=0.0033  Score=68.59  Aligned_cols=131  Identities=16%  Similarity=0.023  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHHHhcCCccccCCCcccccccc--ccccc-cEEEEcC-CCCeEeeCCCCCHHHHHHHHHcC--CCCcee
Q psy7309         314 LLESTGDKLRRIFQLHGGAHFQTPLLTPLNSLT--ATSET-TASVMTR-GGSIVTLPHDLRIPFARYLAQNG--SIVSMK  387 (454)
Q Consensus       314 ~~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~~--~~~~~-~~~~~d~-~G~~~~Lr~d~T~p~aR~~a~~~--~~~~~k  387 (454)
                      -.+++.++++.+|...||.++.|..|...+.+.  ..... .+++.++ +.+.-+||+.+...+.+.++.|.  +..++|
T Consensus       494 ~~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~~~~~~v~L~NPis~e~svLRtsLlpgLL~~l~~N~~r~~~~vr  573 (795)
T 2rhq_B          494 DRQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVR  573 (795)
T ss_dssp             HHHHHHHHHHHHHHHTTCEECCCCSEECTTTTTTTCSSCCCCEECSSCSCTTSSEECSCSHHHHHHHHHHHHHTTCCCEE
T ss_pred             HHHHHHHHHHHHHHHCCCEEEecCCccCHHHHHhhCCCCCceEEEcCCCchhhhhhhhccHHHHHHHHHHHhcCCCCCeE
Confidence            366788999999999999999999886654331  01234 5788777 44566899999999999998752  257999


Q ss_pred             eEeecCccccCCCCCCccceEEEEEEEEEcCCC-------CcccHHH-HHHHHHHHHHhCCCCCcEE
Q psy7309         388 RYCIDRVFRERRVLGFHPRELYECAFDIVTNTP-------GVLTMGS-LRRCLMGSFRRFNYGNISF  446 (454)
Q Consensus       388 ~~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~-------~~~~d~e-~~~~~~~~l~~~~~~~~~i  446 (454)
                      +|.+|+|||.+....++ .|+.|.++=+.|...       ....|.. +-.++-.+|+.+|+. +.+
T Consensus       574 lFEiG~Vf~~d~~~~~~-~e~~~la~l~~G~~~~~~w~~~~~~~dF~dlKg~le~ll~~lG~~-~~~  638 (795)
T 2rhq_B          574 LYEIGRVFFGNGEGELP-DEVEYLSGILTGEYVVNAWQGKKEEIDFFIAKGVVDRVAEKLNLE-FSY  638 (795)
T ss_dssp             EEEEEEEEECCCTTSCC-EEEEEEEEEEESEEEEEGGGTEEEECCHHHHHHHHHHHHHHHTCC-CEE
T ss_pred             EEEEeeEEecCCcccCc-chhhEEEEEEEeccccccccCCCCCCCHHHHHHHHHHHHHHcCCc-EEE
Confidence            99999999964321133 899999998888530       1113444 444555677778874 444


No 331
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B*
Probab=96.21  E-value=0.02  Score=62.24  Aligned_cols=124  Identities=17%  Similarity=0.083  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHhcCCccccCCCccccccc--cccccccEEEEcC-CCCeEeeCCCCCHHHHHHHHHcC--C-CCceee
Q psy7309         315 LESTGDKLRRIFQLHGGAHFQTPLLTPLNSL--TATSETTASVMTR-GGSIVTLPHDLRIPFARYLAQNG--S-IVSMKR  388 (454)
Q Consensus       315 ~~~i~~~l~~~f~~~G~~~i~tp~le~~~~~--~~~~~~~~~~~d~-~G~~~~Lr~d~T~p~aR~~a~~~--~-~~~~k~  388 (454)
                      .+++.++++.++...||.++.|-.|...+.+  .......+++.++ +-+.-+||+.+...+.+.++.|.  + ..++|+
T Consensus       491 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~~~~~v~L~NPis~d~svLRtsLlpgLL~~l~~N~~r~~~~~vrl  570 (785)
T 1b7y_B          491 PYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALL  570 (785)
T ss_dssp             HHHHHHHHHHHHHHHTCEECCCCSEECTTHHHHTTCCCCSCEESSCSSTTSSEECSCSHHHHHHHHHHHHHHSCCSCEEE
T ss_pred             HHHHHHHHHHHHHHCCCEEEecCcccCHHHHHhcCCCCCeEEEcCCCchhhhhhhhhhHHHHHHHHHHHhhcCCCCCeEE
Confidence            5678889999999999999998888665432  1112346788876 44566899999999999998762  2 378999


Q ss_pred             EeecCccccCCCCCCccceEEEEEEEEEcCCC------CcccHHH-HHHHHHHHHHhCCCCCcEEE
Q psy7309         389 YCIDRVFRERRVLGFHPRELYECAFDIVTNTP------GVLTMGS-LRRCLMGSFRRFNYGNISFA  447 (454)
Q Consensus       389 ~y~g~vfR~~~~~~g~~rE~~Q~g~eiig~~~------~~~~d~e-~~~~~~~~l~~~~~~~~~i~  447 (454)
                      |.+|+||| +       .|+.|.++=+.|...      ....|.. +-.++-.+|+.+|+ ++.++
T Consensus       571 FEiG~Vf~-~-------~e~~~lagl~~G~~~~~~w~~~~~vdf~dlKg~le~ll~~lgi-~~~~~  627 (785)
T 1b7y_B          571 FEVGRVFR-E-------REETHLAGLLFGEGVGLPWAKERLSGYFLLKGYLEALFARLGL-AFRVE  627 (785)
T ss_dssp             EEEEEEES-S-------SEEEEEEEEEESSCBSCSSSSCCBCSHHHHHHHHHHHHHHHTC-CCEEE
T ss_pred             EEEeeeec-c-------ChhhEEEEEEECCCcccccCccCCcCHHHHHHHHHHHHHHcCC-ceEEe
Confidence            99999999 2       799999999999641      1123444 44455557777887 45543


No 332
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=96.05  E-value=0.0053  Score=59.33  Aligned_cols=30  Identities=13%  Similarity=0.283  Sum_probs=27.4

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      .++||+|++|.|||++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            579999999999999878889999999875


No 333
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=95.80  E-value=0.0061  Score=58.38  Aligned_cols=30  Identities=33%  Similarity=0.423  Sum_probs=25.7

Q ss_pred             CCcccCCCCCcEEEcc--CCCeEEecccchhh
Q psy7309          22 GIIHRDLKPVNIFIDY--EDHVKIGDFGLATN   51 (454)
Q Consensus        22 giiHrDLKp~NILl~~--~~~vKL~DFGla~~   51 (454)
                      .++|+|++|.||+++.  .+.+.|+||+.+..
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAI  223 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence            4799999999999998  45678999998863


No 334
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=95.20  E-value=0.017  Score=55.74  Aligned_cols=29  Identities=21%  Similarity=0.350  Sum_probs=25.2

Q ss_pred             CcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309          23 IIHRDLKPVNIFIDYEDHVKIGDFGLATN   51 (454)
Q Consensus        23 iiHrDLKp~NILl~~~~~vKL~DFGla~~   51 (454)
                      ++|+|++|.|||++.++.+.|+||+.+..
T Consensus       209 ~~H~D~~~~N~l~~~~~~~~~iD~~~~~~  237 (320)
T 3r70_A          209 LVHNDFSANNMIFRNNRLFGVIDFGDFNV  237 (320)
T ss_dssp             EECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred             eeECCCCCCcEEEECCceEEEECCccccc
Confidence            49999999999999865579999998863


No 335
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=94.85  E-value=0.014  Score=58.64  Aligned_cols=32  Identities=19%  Similarity=0.342  Sum_probs=27.8

Q ss_pred             HHcCCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309          19 HSQGIIHRDLKPVNIFIDYEDHVKIGDFGLATN   51 (454)
Q Consensus        19 H~~giiHrDLKp~NILl~~~~~vKL~DFGla~~   51 (454)
                      +...++|+|++|.|||++.++ ++|+||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            356799999999999998776 99999998763


No 336
>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A
Probab=94.82  E-value=0.03  Score=56.29  Aligned_cols=93  Identities=8%  Similarity=0.036  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHHHhc--------CCccccC-CCcccccc-ccc----c------ccccEEEEcCCCCeEeeCCCCCHHHH
Q psy7309         315 LESTGDKLRRIFQLH--------GGAHFQT-PLLTPLNS-LTA----T------SETTASVMTRGGSIVTLPHDLRIPFA  374 (454)
Q Consensus       315 ~~~i~~~l~~~f~~~--------G~~~i~t-p~le~~~~-~~~----~------~~~~~~~~d~~G~~~~Lr~d~T~p~a  374 (454)
                      ...+.+.|+++|...        ||.++.+ |.++.... |..    .      ...+|.+ +   ...+||...++-.+
T Consensus        50 l~~~~~~i~~~f~~~~~~~~g~~Gf~e~~~~~~v~s~~~NFd~L~~p~dHpaR~~~Dtfyi-~---~~~vLRThts~~~~  125 (415)
T 3cmq_A           50 LWLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYL-N---RTHMLRAHTSAHQW  125 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSCCCEEECCCCSEEEHHHHTGGGTCCTTCGGGCGGGSCBS-S---SSEEECSSGGGGHH
T ss_pred             HHHHHHHHHHHHHhhhccccCCCCcEEEcCCCccccHHHHHHHhCCCCCCCcccccceEEe-c---CCeEEcCCCcHHHH
Confidence            567777777777776        9999998 77764332 211    0      1234444 2   34899999999999


Q ss_pred             HHHHHcCCCCceeeEeecCccccCCCCCCccceEEEEE-EEE
Q psy7309         375 RYLAQNGSIVSMKRYCIDRVFRERRVLGFHPRELYECA-FDI  415 (454)
Q Consensus       375 R~~a~~~~~~~~k~~y~g~vfR~~~~~~g~~rE~~Q~g-~ei  415 (454)
                      |.+..+   .| |++.+|+|||.+.....++.+|.|.. +-+
T Consensus       126 ~~l~~~---~~-k~~~~G~VyR~D~~da~h~n~fhQ~egv~l  163 (415)
T 3cmq_A          126 DLLHAG---LD-AFLVVGDVYRRDQIDSQHYPIFHQLEAVRL  163 (415)
T ss_dssp             HHHHTT---CS-EEEEEEEEECCCCCBTTBCSEEEEEEEEEE
T ss_pred             HHHHHC---CC-CEEEeeeEEeccchhhhhhHHhcCCCcEEE
Confidence            998754   34 99999999999877788899999874 444


No 337
>3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli}
Probab=94.08  E-value=0.13  Score=56.07  Aligned_cols=129  Identities=9%  Similarity=-0.067  Sum_probs=84.0

Q ss_pred             HHHHHHHHHhcCCccccCCCccccccccc--cccccEEEEcC-CCCeEeeCCCCCHHHHHHHHHcCC--CCceeeEeecC
Q psy7309         319 GDKLRRIFQLHGGAHFQTPLLTPLNSLTA--TSETTASVMTR-GGSIVTLPHDLRIPFARYLAQNGS--IVSMKRYCIDR  393 (454)
Q Consensus       319 ~~~l~~~f~~~G~~~i~tp~le~~~~~~~--~~~~~~~~~d~-~G~~~~Lr~d~T~p~aR~~a~~~~--~~~~k~~y~g~  393 (454)
                      .++++..+...||.|+.|-+|...+.+..  ...+.+++.++ +-+.-+||+.+...+-..++.|.+  ..++|+|.+|+
T Consensus       495 ~~~~r~~l~~~G~~Evitysf~~~~~~~~~~~~~~~v~l~NPis~e~svmRtsLlpgLL~~~~~N~~r~~~~v~lFEiG~  574 (795)
T 3pco_B          495 LKRVKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGL  574 (795)
T ss_dssp             HHHHHHHHHHTTCEECCCCSEECHHHHHHHSSSCCCCBCSSCSCSTTCEECSSSHHHHHHHHHHHHTSSCCCCEEEEEEE
T ss_pred             HHHHHHHHHHCCCeeeeccCcCCHHHHHhhCCCCCeEEEcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCccEEEeee
Confidence            44555566666777776666654433211  12345666666 445678999999999999887633  45799999999


Q ss_pred             ccccCCCCCCccceEEEEEEEEEcCCC-------CcccHHHHHH-HHHHHHHhCCC-CCcEEE
Q psy7309         394 VFRERRVLGFHPRELYECAFDIVTNTP-------GVLTMGSLRR-CLMGSFRRFNY-GNISFA  447 (454)
Q Consensus       394 vfR~~~~~~g~~rE~~Q~g~eiig~~~-------~~~~d~e~~~-~~~~~l~~~~~-~~~~i~  447 (454)
                      ||+.+......++|....++=+.|...       +...|..-+. ++-.+|..+|+ .++.+.
T Consensus       575 Vf~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~dF~dlKg~ve~ll~~lg~~~~~~~~  637 (795)
T 3pco_B          575 RFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEFR  637 (795)
T ss_dssp             EEEECTTSSTTEEEEEEEEEEEESBSSCSCSSSCCCBCCHHHHHHHHHHHTTTSSCCSSCCEE
T ss_pred             EEecCCCcccCcchhheEEEEEECCCcccccccCCCCCCHHHHHHHHHHHHHHcCCCcceEEE
Confidence            998754333457888888888888531       1234555555 45556777886 455554


No 338
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=92.61  E-value=0.047  Score=52.37  Aligned_cols=30  Identities=33%  Similarity=0.439  Sum_probs=25.9

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      .++||+|++|.|||++.++.+.|+||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            479999999999999876556899999875


No 339
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=92.58  E-value=0.068  Score=51.36  Aligned_cols=28  Identities=21%  Similarity=0.107  Sum_probs=24.8

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      .+++|+|++|.|||++ + .+.|+||+.+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            4689999999999998 4 89999999875


No 340
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=92.31  E-value=0.063  Score=51.46  Aligned_cols=31  Identities=32%  Similarity=0.487  Sum_probs=25.8

Q ss_pred             cCCcccCCCCCcEEEcc---CCCe-EEecccchhh
Q psy7309          21 QGIIHRDLKPVNIFIDY---EDHV-KIGDFGLATN   51 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~---~~~v-KL~DFGla~~   51 (454)
                      ..++|+|++|.||+++.   ++.+ .|+||+.+..
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            36899999999999987   4554 8999998763


No 341
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=92.25  E-value=0.046  Score=52.87  Aligned_cols=30  Identities=30%  Similarity=0.338  Sum_probs=26.6

Q ss_pred             cCCcccCCCCCcEEEccC----CCeEEecccchh
Q psy7309          21 QGIIHRDLKPVNIFIDYE----DHVKIGDFGLAT   50 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~----~~vKL~DFGla~   50 (454)
                      .+++|+|+.+.|||++.+    +.+.|+||+.+.
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            479999999999999874    678999999886


No 342
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=91.79  E-value=0.058  Score=52.59  Aligned_cols=30  Identities=13%  Similarity=0.170  Sum_probs=25.7

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      ..++|+|++|.|||++.++.+.|+||+.|.
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            479999999999999954457899999876


No 343
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=90.59  E-value=0.088  Score=48.92  Aligned_cols=28  Identities=21%  Similarity=0.265  Sum_probs=25.0

Q ss_pred             CcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          23 IIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        23 iiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      ++|+|+.|.|||++..+.+-|+||+.+.
T Consensus       195 l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          195 VTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            7999999999999977667799999876


No 344
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=90.36  E-value=0.2  Score=49.06  Aligned_cols=29  Identities=24%  Similarity=0.287  Sum_probs=24.4

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      .+++|+|++|.|||++.++ +.|+||..|.
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            3699999999999998554 8999998775


No 345
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=89.71  E-value=0.11  Score=51.16  Aligned_cols=30  Identities=20%  Similarity=0.277  Sum_probs=26.2

Q ss_pred             CCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309          22 GIIHRDLKPVNIFIDYEDHVKIGDFGLATN   51 (454)
Q Consensus        22 giiHrDLKp~NILl~~~~~vKL~DFGla~~   51 (454)
                      .++|+|++|.||+++.++.+.|+||+.+..
T Consensus       214 ~l~HgDl~~~Nil~~~~~~~~viD~~~~~~  243 (362)
T 3ovc_A          214 HLVHADFGSNNVLTDNGRITAVIDWSEAMF  243 (362)
T ss_dssp             EEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred             EEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence            579999999999998776778999998863


No 346
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=89.16  E-value=0.17  Score=49.28  Aligned_cols=31  Identities=19%  Similarity=0.294  Sum_probs=27.4

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEecccchhh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFGLATN   51 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFGla~~   51 (454)
                      .+++|+|+.|.||+++.++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            3699999999999999878899999987763


No 347
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=88.64  E-value=0.25  Score=48.82  Aligned_cols=30  Identities=30%  Similarity=0.372  Sum_probs=25.6

Q ss_pred             HcCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          20 SQGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        20 ~~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      ...++|+|++|.|||++.+ .++|+||..+.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            3579999999999999865 48999998765


No 348
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=86.75  E-value=0.25  Score=50.28  Aligned_cols=15  Identities=33%  Similarity=0.317  Sum_probs=14.2

Q ss_pred             CCcccCCCCCcEEEc
Q psy7309          22 GIIHRDLKPVNIFID   36 (454)
Q Consensus        22 giiHrDLKp~NILl~   36 (454)
                      .++|+|+.+.|||++
T Consensus       291 v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEECSCCCGGGEEEC
T ss_pred             eEEecCCCCCcEEee
Confidence            589999999999998


No 349
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=86.23  E-value=0.24  Score=49.89  Aligned_cols=29  Identities=28%  Similarity=0.397  Sum_probs=24.6

Q ss_pred             CCcccCCCCCcEEEccC----------------------------CCeEEecccchh
Q psy7309          22 GIIHRDLKPVNIFIDYE----------------------------DHVKIGDFGLAT   50 (454)
Q Consensus        22 giiHrDLKp~NILl~~~----------------------------~~vKL~DFGla~   50 (454)
                      .++|+|+.+.|||++.+                            +.+.|+||..|.
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~  306 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS  306 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCC
Confidence            58999999999999875                            678999998876


No 350
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=86.12  E-value=0.19  Score=50.33  Aligned_cols=29  Identities=21%  Similarity=0.261  Sum_probs=26.3

Q ss_pred             CCcccCCCCCcEEEccC------CCeEEecccchh
Q psy7309          22 GIIHRDLKPVNIFIDYE------DHVKIGDFGLAT   50 (454)
Q Consensus        22 giiHrDLKp~NILl~~~------~~vKL~DFGla~   50 (454)
                      .++|+|+.+.||+++.+      +.+.|+||..|.
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            58999999999999876      789999999876


No 351
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=85.64  E-value=0.3  Score=46.30  Aligned_cols=28  Identities=21%  Similarity=0.194  Sum_probs=24.5

Q ss_pred             CCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          22 GIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        22 giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      .++|+|+.|.||+ ..++.+.|+||..|.
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            4899999999999 557789999999876


No 352
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=83.38  E-value=1.1  Score=40.91  Aligned_cols=44  Identities=16%  Similarity=0.175  Sum_probs=31.2

Q ss_pred             hhHHHHHHHHHHHHHHHHH-cCCcccCCCCCcEEEccCCCeEEec
Q psy7309           2 GRAWRLLREIIEGLSHIHS-QGIIHRDLKPVNIFIDYEDHVKIGD   45 (454)
Q Consensus         2 ~~i~~i~~qil~gL~~LH~-~giiHrDLKp~NILl~~~~~vKL~D   45 (454)
                      +++|.++.|.+.+|.-+-. ..-..+=+-|..|++..+|+|...+
T Consensus        49 EqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~   93 (229)
T 2yle_A           49 EQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP   93 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred             HHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc
Confidence            4799999999999887632 1111233346889999999887663


No 353
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=83.36  E-value=0.48  Score=46.96  Aligned_cols=29  Identities=28%  Similarity=0.418  Sum_probs=26.3

Q ss_pred             CCcccCCCCCcEEEccC----CCeEEecccchh
Q psy7309          22 GIIHRDLKPVNIFIDYE----DHVKIGDFGLAT   50 (454)
Q Consensus        22 giiHrDLKp~NILl~~~----~~vKL~DFGla~   50 (454)
                      .++|+|+.+.||+++.+    +.+.|+||..|.
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            58999999999999876    689999999886


No 354
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=82.73  E-value=0.62  Score=44.11  Aligned_cols=28  Identities=29%  Similarity=0.183  Sum_probs=24.0

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      .+++|+|+.|.||+++. +.+.|+|| .+.
T Consensus       188 ~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~  215 (288)
T 3d1u_A          188 PARIHGDLWNGNVLWQD-DGAVVIDP-AAH  215 (288)
T ss_dssp             CEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred             CcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence            36999999999999987 55889999 664


No 355
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=80.69  E-value=0.63  Score=46.28  Aligned_cols=29  Identities=21%  Similarity=0.284  Sum_probs=24.7

Q ss_pred             CCcccCCCCCcEEEc------cCCCeEEecccchh
Q psy7309          22 GIIHRDLKPVNIFID------YEDHVKIGDFGLAT   50 (454)
Q Consensus        22 giiHrDLKp~NILl~------~~~~vKL~DFGla~   50 (454)
                      .++|+|+.+.|||+.      .++.+.++||..|.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            368999999999993      45679999999886


No 356
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=75.68  E-value=1.1  Score=45.17  Aligned_cols=28  Identities=18%  Similarity=0.452  Sum_probs=25.5

Q ss_pred             CCcccCCCCCcEEEccCCCeEEecccchh
Q psy7309          22 GIIHRDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        22 giiHrDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      .++|+|+++.||+ +.++.+.|+||..|.
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCC
Confidence            5899999999999 778889999999886


No 357
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=62.04  E-value=2.8  Score=40.13  Aligned_cols=26  Identities=15%  Similarity=0.122  Sum_probs=23.2

Q ss_pred             cCCcccCCCCCcEEEccCCCeEEeccc
Q psy7309          21 QGIIHRDLKPVNIFIDYEDHVKIGDFG   47 (454)
Q Consensus        21 ~giiHrDLKp~NILl~~~~~vKL~DFG   47 (454)
                      ..+||.|+.+.|++++.++ +.|.|++
T Consensus       207 ~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          207 PSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             CEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             ceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            3699999999999999887 8899985


No 358
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=61.37  E-value=2.8  Score=39.10  Aligned_cols=24  Identities=25%  Similarity=0.196  Sum_probs=20.0

Q ss_pred             CCcccCCCCCcEEEccCCCeEEecc
Q psy7309          22 GIIHRDLKPVNIFIDYEDHVKIGDF   46 (454)
Q Consensus        22 giiHrDLKp~NILl~~~~~vKL~DF   46 (454)
                      .+||.|+.+.||+++.++ ..+.|-
T Consensus       189 ~LvHGDlw~gNvl~~~~g-~~~iDp  212 (288)
T 3f7w_A          189 ARIHGDLWNGNVLWQDDG-AVVIDP  212 (288)
T ss_dssp             EEECSCCSGGGEEEETTE-EEECSC
T ss_pred             eeeecCCCCCcEEEcCCC-eEEEec
Confidence            589999999999999887 446663


No 359
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=37.01  E-value=21  Score=25.80  Aligned_cols=31  Identities=10%  Similarity=0.134  Sum_probs=26.7

Q ss_pred             CcccHHHHHHHHHHHHHhCCCCCcEEEcCcc
Q psy7309         421 GVLTMGSLRRCLMGSFRRFNYGNISFAPHPR  451 (454)
Q Consensus       421 ~~~~d~e~~~~~~~~l~~~~~~~~~i~i~~~  451 (454)
                      +.+--.|++.+++..|..+|.+++.+++|..
T Consensus        58 ndeqakelleliarllqklgykdinvrvngt   88 (96)
T 2jvf_A           58 NDEQAKELLELIARLLQKLGYKDINVRVNGT   88 (96)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCSEEEEEEETT
T ss_pred             ChHHHHHHHHHHHHHHHHhCCCceEEEEcCE
Confidence            4556678999999999999999999998864


No 360
>12as_A Asparagine synthetase; ligase, nitrogen fixation; HET: AMP; 2.20A {Escherichia coli K12} SCOP: d.104.1.1 PDB: 11as_A*
Probab=35.46  E-value=2.9e+02  Score=26.14  Aligned_cols=119  Identities=12%  Similarity=0.114  Sum_probs=74.5

Q ss_pred             HHHHHHHHHHHHHH-----hcCCccccCCCccccc-ccccc---ccccEEEE--cCCCCeEeeCCCCCHHHHHH--HH-H
Q psy7309         314 LLESTGDKLRRIFQ-----LHGGAHFQTPLLTPLN-SLTAT---SETTASVM--TRGGSIVTLPHDLRIPFARY--LA-Q  379 (454)
Q Consensus       314 ~~~~i~~~l~~~f~-----~~G~~~i~tp~le~~~-~~~~~---~~~~~~~~--d~~G~~~~Lr~d~T~p~aR~--~a-~  379 (454)
                      ..+..+..+++.|+     .-|+.+|.+|+|-+.. .+.+.   .++.+.|-  +-.|..+-+    +=++|.+  +| .
T Consensus         7 ~tq~aI~~iK~~f~~~l~~~L~L~rVsaPlfv~~~~GlnD~LnG~ErpV~f~i~~~~~~~~ei----vhSLaKWKR~aL~   82 (330)
T 12as_A            7 AKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGAEKAVQVKVKALPDAQFEV----VHSLAKWKRQTLG   82 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCEEECCCCSEEETTSSCSCCTTTTCCCCEECCSSSTTCCEEE----CSCCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEecCCEEecCCCCCCCCCCCceecceEecccCCCceEEE----eeeHHHHHHHHHH
Confidence            45667888888888     9999999999986644 45432   25666664  334665533    3344433  22 2


Q ss_pred             cCC-CCceeeEeecCccccCCC--CCCccceEEEEEEEEEcCCC--CcccHHHHHHHHHHHH
Q psy7309         380 NGS-IVSMKRYCIDRVFRERRV--LGFHPRELYECAFDIVTNTP--GVLTMGSLRRCLMGSF  436 (454)
Q Consensus       380 ~~~-~~~~k~~y~g~vfR~~~~--~~g~~rE~~Q~g~eiig~~~--~~~~d~e~~~~~~~~l  436 (454)
                      +.+ ..--+.|..-+.-|.+..  ..-|.-++.|++.|.+....  ....-.|++.-+..++
T Consensus        83 ~y~f~~geGlytdMnaIR~dee~ld~~HS~yvDQwDWE~vi~~~~R~~~~Lk~tV~~Iy~~i  144 (330)
T 12as_A           83 QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGI  144 (330)
T ss_dssp             HTTCCTTCEEEEEEEEECTTCSCCCSSCCSEEEEEEEEEECCTTCCSHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCeeEecCcccccCcccCCCceeEEEeeeeeEEeccccchHHHHHHHHHHHHHHHH
Confidence            321 234699999999997542  34677799999999987642  2223344444444444


No 361
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=28.23  E-value=28  Score=36.95  Aligned_cols=25  Identities=20%  Similarity=0.215  Sum_probs=22.8

Q ss_pred             cCCCCCcEEEccCCCeEEecccchh
Q psy7309          26 RDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        26 rDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      +|=+|+|||++.+|++-=+|||.+-
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            5889999999999999999999864


No 362
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=23.37  E-value=78  Score=28.35  Aligned_cols=45  Identities=13%  Similarity=0.087  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHHHHHHHcCCcccCCCCCcEEEccCCCeEEecccch
Q psy7309           4 AWRLLREIIEGLSHIHSQGIIHRDLKPVNIFIDYEDHVKIGDFGLA   49 (454)
Q Consensus         4 i~~i~~qil~gL~~LH~~giiHrDLKp~NILl~~~~~vKL~DFGla   49 (454)
                      -++++.+|+.-.. -|...-+|-=|.|+||+++.++.++|.=.|.-
T Consensus        87 Klrll~nl~~L~~-~~~~~r~tf~l~P~NL~f~~~~~p~i~hRGi~  131 (219)
T 4ano_A           87 RIRAAIHLVSKVK-HHSARRLIFIVCPENLMFNRALEPFFLHVGVK  131 (219)
T ss_dssp             HHHHHHHHHHHHS-SCCSSSEECCCCGGGEEECTTCCEEESCCEET
T ss_pred             HHHHHHHHHHHHH-HhhhCceeEEEeCceEEEeCCCcEEEEEcCCc
Confidence            4555555544333 01245567788999999999999999988864


No 363
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=20.20  E-value=51  Score=34.43  Aligned_cols=25  Identities=20%  Similarity=0.199  Sum_probs=22.5

Q ss_pred             cCCCCCcEEEccCCCeEEecccchh
Q psy7309          26 RDLKPVNIFIDYEDHVKIGDFGLAT   50 (454)
Q Consensus        26 rDLKp~NILl~~~~~vKL~DFGla~   50 (454)
                      +|=+++|||++.+|++-=+|||.+-
T Consensus       477 gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          477 GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             cCCCCcceeEcCCCCEeeeehHHhh
Confidence            4888999999999999999999864


Done!