Query psy731
Match_columns 494
No_of_seqs 195 out of 653
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 23:31:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy731.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/731hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q6k_A 43.2 kDa salivary prote 100.0 2.9E-94 1E-98 750.0 40.1 361 30-493 2-379 (381)
2 2qe8_A Uncharacterized protein 100.0 4.4E-41 1.5E-45 339.2 32.3 300 63-483 17-336 (343)
3 3q6k_A 43.2 kDa salivary prote 99.7 1.1E-16 3.8E-21 166.6 21.7 217 136-409 121-343 (381)
4 2qc5_A Streptogramin B lactona 99.5 2.2E-11 7.4E-16 116.0 31.6 271 62-458 19-290 (300)
5 2p4o_A Hypothetical protein; p 99.5 1.5E-11 5.2E-16 121.4 31.3 259 127-483 32-299 (306)
6 4hw6_A Hypothetical protein, I 99.5 5E-12 1.7E-16 132.8 25.5 248 122-457 134-420 (433)
7 1q7f_A NHL, brain tumor CG1071 99.5 1.9E-11 6.4E-16 117.4 27.4 240 124-457 27-268 (286)
8 2qc5_A Streptogramin B lactona 99.5 3.1E-11 1.1E-15 114.9 27.6 230 125-457 18-247 (300)
9 3fvz_A Peptidyl-glycine alpha- 99.5 8E-12 2.7E-16 124.2 23.7 266 125-457 22-309 (329)
10 3hrp_A Uncharacterized protein 99.4 7.4E-11 2.5E-15 122.5 29.5 239 125-457 129-397 (409)
11 3tc9_A Hypothetical hydrolase; 99.4 1.4E-11 4.9E-16 129.1 23.2 250 122-457 132-417 (430)
12 2z2n_A Virginiamycin B lyase; 99.4 2.5E-10 8.5E-15 108.6 28.1 230 125-457 13-242 (299)
13 1rwi_B Serine/threonine-protei 99.4 6.2E-11 2.1E-15 112.1 23.4 226 128-457 25-251 (270)
14 2z2n_A Virginiamycin B lyase; 99.4 4.6E-10 1.6E-14 106.7 28.0 269 62-457 14-283 (299)
15 2dg1_A DRP35, lactonase; beta 99.3 2.2E-09 7.6E-14 104.9 28.5 257 126-483 44-315 (333)
16 3v65_B Low-density lipoprotein 99.3 1.9E-09 6.5E-14 111.0 28.2 225 125-450 114-340 (386)
17 3dsm_A Uncharacterized protein 99.3 6.8E-09 2.3E-13 103.4 31.4 244 63-420 44-302 (328)
18 2fp8_A Strictosidine synthase; 99.3 4.7E-10 1.6E-14 110.9 22.6 243 125-457 17-300 (322)
19 3e5z_A Putative gluconolactona 99.3 2.5E-09 8.7E-14 103.4 26.8 231 125-459 26-277 (296)
20 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 7E-10 2.4E-14 106.9 22.3 243 125-459 16-288 (314)
21 3v64_C Agrin; beta propeller, 99.3 3E-09 1E-13 108.0 28.1 224 125-449 71-296 (349)
22 1ijq_A LDL receptor, low-densi 99.3 1.5E-09 5.1E-14 108.4 25.3 210 157-457 11-225 (316)
23 3dsm_A Uncharacterized protein 99.2 5.1E-09 1.7E-13 104.4 27.8 270 73-457 2-285 (328)
24 1ijq_A LDL receptor, low-densi 99.2 9.9E-09 3.4E-13 102.5 29.6 226 126-450 29-260 (316)
25 3g4e_A Regucalcin; six bladed 99.2 3.3E-09 1.1E-13 103.7 24.0 238 126-460 12-263 (297)
26 3v64_C Agrin; beta propeller, 99.2 5.3E-09 1.8E-13 106.3 25.8 179 199-457 83-262 (349)
27 1npe_A Nidogen, entactin; glyc 99.2 3.4E-08 1.2E-12 94.7 29.3 225 126-451 35-262 (267)
28 3kya_A Putative phosphatase; s 99.2 2.9E-09 1E-13 114.3 23.8 268 123-457 135-462 (496)
29 3dr2_A Exported gluconolactona 99.2 8E-09 2.7E-13 101.2 24.9 232 124-459 42-297 (305)
30 1npe_A Nidogen, entactin; glyc 99.2 8.6E-09 2.9E-13 98.9 24.6 188 184-457 36-225 (267)
31 3v65_B Low-density lipoprotein 99.2 3.8E-09 1.3E-13 108.7 23.3 188 185-457 117-305 (386)
32 1q7f_A NHL, brain tumor CG1071 99.1 4.9E-08 1.7E-12 93.4 28.5 248 62-420 29-280 (286)
33 3sov_A LRP-6, low-density lipo 99.1 5.3E-08 1.8E-12 98.0 29.5 226 125-450 33-260 (318)
34 3m0c_C LDL receptor, low-densi 99.1 1.6E-08 5.4E-13 114.3 28.3 227 125-449 422-653 (791)
35 3vgz_A Uncharacterized protein 99.1 1.6E-07 5.5E-12 91.2 31.5 302 65-482 43-353 (353)
36 3p5b_L Low density lipoprotein 99.1 3.7E-08 1.3E-12 102.0 27.6 225 125-449 110-341 (400)
37 3p5b_L Low density lipoprotein 99.1 1.5E-08 5.3E-13 104.9 24.6 181 199-457 122-307 (400)
38 3vgz_A Uncharacterized protein 99.1 8.6E-08 3E-12 93.1 27.9 243 129-457 43-290 (353)
39 3sov_A LRP-6, low-density lipo 99.0 2.5E-08 8.5E-13 100.4 22.2 178 199-457 45-225 (318)
40 3fvz_A Peptidyl-glycine alpha- 99.0 2.2E-08 7.6E-13 99.3 21.5 223 124-420 88-322 (329)
41 1n7d_A LDL receptor, low-densi 99.0 3.6E-09 1.2E-13 117.6 17.1 213 157-457 387-601 (699)
42 1rwi_B Serine/threonine-protei 99.0 7.1E-08 2.4E-12 90.9 23.4 238 64-420 25-264 (270)
43 3hrp_A Uncharacterized protein 99.0 3E-08 1E-12 102.8 22.7 187 199-458 140-341 (409)
44 3m0c_C LDL receptor, low-densi 99.0 3.9E-08 1.3E-12 111.1 24.5 182 199-458 434-620 (791)
45 2ghs_A AGR_C_1268P; regucalcin 99.0 1.6E-07 5.5E-12 93.4 26.3 235 127-460 49-293 (326)
46 4a0p_A LRP6, LRP-6, low-densit 99.0 2.4E-07 8.3E-12 101.9 28.6 221 125-448 35-257 (628)
47 2p9w_A MAL S 1 allergenic prot 98.9 3.4E-07 1.2E-11 93.6 25.7 279 60-481 10-322 (334)
48 3u4y_A Uncharacterized protein 98.9 5.5E-07 1.9E-11 87.2 25.7 222 136-457 8-239 (331)
49 1n7d_A LDL receptor, low-densi 98.8 2.2E-08 7.4E-13 111.4 14.8 225 126-450 405-636 (699)
50 3u4y_A Uncharacterized protein 98.8 1.9E-06 6.4E-11 83.4 26.6 240 127-458 41-292 (331)
51 4a0p_A LRP6, LRP-6, low-densit 98.8 7.7E-07 2.6E-11 97.9 26.2 178 198-457 46-224 (628)
52 3s94_A LRP-6, low-density lipo 98.8 6.6E-07 2.3E-11 98.2 25.4 225 124-448 37-263 (619)
53 3s94_A LRP-6, low-density lipo 98.8 1.5E-06 5.3E-11 95.3 27.6 220 126-447 348-569 (619)
54 4hw6_A Hypothetical protein, I 98.8 1.1E-06 3.6E-11 92.3 25.0 273 63-419 139-432 (433)
55 2fp8_A Strictosidine synthase; 98.8 5.7E-07 2E-11 88.6 21.1 204 126-420 79-313 (322)
56 2qe8_A Uncharacterized protein 98.7 4.3E-07 1.5E-11 90.8 18.5 220 137-418 92-319 (343)
57 1l0q_A Surface layer protein; 98.7 1.6E-05 5.3E-10 78.7 27.7 225 129-457 34-262 (391)
58 3hfq_A Uncharacterized protein 98.7 9.5E-06 3.2E-10 79.5 25.5 254 127-457 40-304 (347)
59 2p4o_A Hypothetical protein; p 98.6 2.6E-06 8.7E-11 83.7 20.8 209 162-463 18-238 (306)
60 1ri6_A Putative isomerase YBHE 98.6 1.5E-05 5E-10 76.5 25.0 246 128-457 39-295 (343)
61 3tc9_A Hypothetical hydrolase; 98.6 2E-06 6.8E-11 89.9 20.1 193 186-457 139-358 (430)
62 3qqz_A Putative uncharacterize 98.6 7.2E-06 2.5E-10 80.7 22.6 160 280-463 82-249 (255)
63 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 7.4E-06 2.5E-10 78.6 22.1 260 63-420 18-299 (314)
64 3a9g_A Putative uncharacterize 98.5 5.8E-05 2E-09 76.9 27.4 298 124-482 26-350 (354)
65 1l0q_A Surface layer protein; 98.5 4.3E-05 1.5E-09 75.5 25.6 214 139-457 3-218 (391)
66 3bws_A Protein LP49; two-domai 98.5 6.6E-05 2.2E-09 75.3 26.8 225 128-456 171-418 (433)
67 3g4e_A Regucalcin; six bladed 98.5 1.2E-05 4.2E-10 78.3 19.9 190 185-457 14-216 (297)
68 2dg1_A DRP35, lactonase; beta 98.5 1.4E-05 4.9E-10 77.7 20.4 193 185-457 46-250 (333)
69 2ism_A Putative oxidoreductase 98.4 6.8E-05 2.3E-09 76.0 25.3 276 124-459 28-334 (352)
70 3scy_A Hypothetical bacterial 98.4 0.00067 2.3E-08 66.7 31.7 250 128-457 51-324 (361)
71 3sre_A PON1, serum paraoxonase 98.4 7.2E-05 2.5E-09 77.0 25.5 258 64-415 51-353 (355)
72 3e5z_A Putative gluconolactona 98.4 0.00015 5.2E-09 69.6 25.8 195 128-420 70-286 (296)
73 1jmx_B Amine dehydrogenase; ox 98.4 1.5E-05 5E-10 76.9 18.5 74 133-225 6-79 (349)
74 1ri6_A Putative isomerase YBHE 98.4 0.00015 5.1E-09 69.4 24.7 236 128-449 85-332 (343)
75 1pby_B Quinohemoprotein amine 98.4 0.00015 5.3E-09 69.2 24.7 216 129-421 36-311 (337)
76 3bws_A Protein LP49; two-domai 98.3 6.3E-05 2.1E-09 75.5 22.3 230 130-458 126-364 (433)
77 3hfq_A Uncharacterized protein 98.3 0.00022 7.5E-09 69.6 25.3 268 61-421 38-320 (347)
78 3kya_A Putative phosphatase; s 98.3 2.4E-05 8.4E-10 83.9 19.1 205 200-457 151-397 (496)
79 3scy_A Hypothetical bacterial 98.3 0.00031 1.1E-08 69.1 25.4 217 131-421 104-340 (361)
80 3c75_H MADH, methylamine dehyd 98.2 0.00012 4.1E-09 77.1 22.6 254 138-460 85-391 (426)
81 3dr2_A Exported gluconolactona 98.2 6.3E-05 2.2E-09 73.3 19.1 196 128-418 87-304 (305)
82 1nir_A Nitrite reductase; hemo 98.2 0.00031 1E-08 75.3 25.3 208 134-421 145-356 (543)
83 2iwa_A Glutamine cyclotransfer 98.2 0.00015 5E-09 71.8 20.2 141 279-462 76-229 (266)
84 1pby_B Quinohemoprotein amine 98.2 0.00081 2.8E-08 64.1 24.7 59 157-225 12-70 (337)
85 3hxj_A Pyrrolo-quinoline quino 98.1 0.00075 2.6E-08 64.9 23.9 208 137-459 107-314 (330)
86 2ghs_A AGR_C_1268P; regucalcin 98.1 0.00035 1.2E-08 69.1 21.4 180 199-457 59-247 (326)
87 3no2_A Uncharacterized protein 98.1 0.00097 3.3E-08 65.0 24.1 223 137-457 4-230 (276)
88 1qks_A Cytochrome CD1 nitrite 98.1 0.00078 2.7E-08 73.1 25.0 241 134-458 163-408 (567)
89 3hxj_A Pyrrolo-quinoline quino 98.0 7.5E-05 2.6E-09 72.0 14.5 112 130-306 23-134 (330)
90 3mbr_X Glutamine cyclotransfer 98.0 0.0024 8.2E-08 62.4 24.9 205 64-362 22-233 (243)
91 2g8s_A Glucose/sorbosone dehyd 98.0 0.0024 8.1E-08 64.7 25.8 84 125-221 16-108 (353)
92 2iwa_A Glutamine cyclotransfer 98.0 0.0014 4.6E-08 64.8 23.2 214 62-365 20-238 (266)
93 1nir_A Nitrite reductase; hemo 98.0 0.0027 9.1E-08 68.0 27.4 231 155-457 247-497 (543)
94 3mbr_X Glutamine cyclotransfer 97.9 0.0016 5.4E-08 63.7 22.4 211 167-464 10-229 (243)
95 3sre_A PON1, serum paraoxonase 97.9 0.0013 4.6E-08 67.5 22.6 85 389-482 221-309 (355)
96 3sjl_D Methylamine dehydrogena 97.9 0.0022 7.6E-08 66.6 23.7 119 137-302 44-173 (386)
97 1jmx_B Amine dehydrogenase; ox 97.9 0.0049 1.7E-07 59.0 24.3 123 65-223 2-137 (349)
98 4a2l_A BT_4663, two-component 97.9 0.0041 1.4E-07 68.9 26.9 240 128-458 358-604 (795)
99 2ece_A 462AA long hypothetical 97.9 0.0098 3.3E-07 63.2 28.4 79 140-221 30-116 (462)
100 2oiz_A Aromatic amine dehydrog 97.9 0.0012 4.2E-08 66.4 20.4 119 138-303 16-145 (361)
101 3nok_A Glutaminyl cyclase; bet 97.8 0.0029 1E-07 62.7 21.9 208 66-364 58-266 (268)
102 4a2l_A BT_4663, two-component 97.8 0.0032 1.1E-07 69.8 24.7 261 127-482 406-676 (795)
103 3nol_A Glutamine cyclotransfer 97.8 0.0022 7.5E-08 63.4 20.7 206 167-464 32-250 (262)
104 2mad_H Methylamine dehydrogena 97.8 0.0093 3.2E-07 60.8 26.2 117 138-302 33-160 (373)
105 3das_A Putative oxidoreductase 97.8 0.0099 3.4E-07 60.8 25.9 297 123-482 28-346 (347)
106 1cru_A Protein (soluble quinop 97.8 0.0091 3.1E-07 62.9 26.3 88 124-221 24-124 (454)
107 3nok_A Glutaminyl cyclase; bet 97.8 0.00066 2.3E-08 67.3 16.2 209 167-464 44-260 (268)
108 3v9f_A Two-component system se 97.7 0.0031 1E-07 69.8 22.6 232 127-457 407-645 (781)
109 1mda_H Methylamine dehydrogena 97.7 0.0028 9.4E-08 65.2 20.5 69 138-224 32-109 (368)
110 3qqz_A Putative uncharacterize 97.7 0.019 6.5E-07 56.2 25.1 116 65-217 29-150 (255)
111 3no2_A Uncharacterized protein 97.6 0.013 4.3E-07 57.0 23.0 126 128-307 38-164 (276)
112 1jof_A Carboxy-CIS,CIS-muconat 97.6 0.0059 2E-07 60.7 21.0 246 128-457 41-328 (365)
113 3amr_A 3-phytase; beta-propell 97.6 0.0065 2.2E-07 62.5 21.4 154 280-464 88-260 (355)
114 3nol_A Glutamine cyclotransfer 97.5 0.0087 3E-07 59.1 20.6 200 128-408 44-244 (262)
115 3v9f_A Two-component system se 97.5 0.006 2E-07 67.5 21.1 234 127-458 363-601 (781)
116 1qks_A Cytochrome CD1 nitrite 97.5 0.052 1.8E-06 58.7 28.0 235 155-457 265-521 (567)
117 1jof_A Carboxy-CIS,CIS-muconat 97.5 0.0083 2.8E-07 59.6 19.8 183 128-365 146-344 (365)
118 1fwx_A Nitrous oxide reductase 97.4 0.0018 6E-08 70.9 14.9 121 330-461 278-409 (595)
119 3c75_H MADH, methylamine dehyd 97.4 0.03 1E-06 58.7 23.3 128 71-224 83-213 (426)
120 2oiz_A Aromatic amine dehydrog 97.2 0.11 3.8E-06 51.9 24.8 87 131-223 54-143 (361)
121 2ece_A 462AA long hypothetical 97.2 0.086 2.9E-06 56.0 24.4 224 128-407 139-399 (462)
122 1k8k_C P40, ARP2/3 complex 41 97.2 0.16 5.3E-06 48.9 24.6 215 129-421 11-234 (372)
123 3a9g_A Putative uncharacterize 97.2 0.021 7E-07 57.9 19.0 164 262-459 29-217 (354)
124 3ott_A Two-component system se 97.1 0.1 3.5E-06 57.3 24.6 263 128-482 374-643 (758)
125 1cru_A Protein (soluble quinop 97.1 0.012 4E-07 62.0 16.3 171 262-459 27-247 (454)
126 2ism_A Putative oxidoreductase 97.0 0.023 8E-07 57.2 17.9 162 262-458 31-221 (352)
127 1gxr_A ESG1, transducin-like e 97.0 0.22 7.4E-06 46.9 24.5 223 128-456 99-323 (337)
128 2mad_H Methylamine dehydrogena 96.9 0.41 1.4E-05 48.5 27.4 87 131-224 70-160 (373)
129 2p9w_A MAL S 1 allergenic prot 96.9 0.1 3.6E-06 53.1 21.3 220 182-458 11-252 (334)
130 2g8s_A Glucose/sorbosone dehyd 96.9 0.21 7.2E-06 50.3 23.6 293 64-418 19-352 (353)
131 2ad6_A Methanol dehydrogenase 96.8 0.47 1.6E-05 51.0 27.1 73 137-227 115-193 (571)
132 3sjl_D Methylamine dehydrogena 96.8 0.071 2.4E-06 55.2 19.6 209 129-421 139-364 (386)
133 3s25_A Hypothetical 7-bladed b 96.7 0.15 5.1E-06 50.7 20.6 188 157-458 89-281 (302)
134 3das_A Putative oxidoreductase 96.7 0.11 3.7E-06 53.1 19.7 122 328-459 79-221 (347)
135 1gxr_A ESG1, transducin-like e 96.6 0.49 1.7E-05 44.4 22.3 171 157-418 164-335 (337)
136 2hqs_A Protein TOLB; TOLB, PAL 96.6 0.76 2.6E-05 46.6 25.1 177 156-420 203-387 (415)
137 2ojh_A Uncharacterized protein 96.5 0.47 1.6E-05 43.3 22.3 79 129-226 44-125 (297)
138 3ott_A Two-component system se 96.5 0.3 1E-05 53.5 23.0 229 128-458 64-297 (758)
139 1yiq_A Quinohemoprotein alcoho 96.5 0.59 2E-05 51.4 25.2 74 137-228 121-201 (689)
140 4g56_B MGC81050 protein; prote 96.5 0.13 4.5E-06 50.9 18.1 201 129-420 142-343 (357)
141 1kb0_A Quinohemoprotein alcoho 96.5 0.72 2.5E-05 50.6 25.6 74 137-227 128-207 (677)
142 2hqs_A Protein TOLB; TOLB, PAL 96.5 0.72 2.5E-05 46.7 24.0 172 198-452 189-366 (415)
143 1mda_H Methylamine dehydrogena 96.4 0.083 2.9E-06 54.1 16.5 128 71-226 30-162 (368)
144 1erj_A Transcriptional repress 96.2 1 3.6E-05 44.7 23.3 216 128-421 125-342 (393)
145 3pe7_A Oligogalacturonate lyas 96.2 0.99 3.4E-05 43.8 24.4 61 408-486 317-386 (388)
146 4gqb_B Methylosome protein 50; 96.1 0.65 2.2E-05 45.9 20.9 180 157-420 150-331 (344)
147 2ecf_A Dipeptidyl peptidase IV 96.1 0.7 2.4E-05 49.7 22.6 165 128-352 38-228 (741)
148 1kv9_A Type II quinohemoprotei 96.1 1.7 5.7E-05 47.6 25.7 74 137-228 117-196 (668)
149 1kb0_A Quinohemoprotein alcoho 95.8 1.7 5.8E-05 47.6 24.5 121 137-306 77-208 (677)
150 1flg_A Protein (quinoprotein e 95.7 3 0.0001 44.9 25.5 79 137-227 117-201 (582)
151 3sfz_A APAF-1, apoptotic pepti 95.6 2.2 7.5E-05 48.8 25.4 212 128-421 659-872 (1249)
152 3s25_A Hypothetical 7-bladed b 95.3 0.77 2.6E-05 45.5 17.6 137 199-420 155-293 (302)
153 2vdu_B TRNA (guanine-N(7)-)-me 95.2 3 0.0001 42.0 22.3 155 199-421 113-272 (450)
154 2ojh_A Uncharacterized protein 95.2 1.8 6.1E-05 39.3 23.1 56 156-226 22-78 (297)
155 4gqb_B Methylosome protein 50; 95.1 2.8 9.6E-05 41.3 21.5 204 129-421 85-290 (344)
156 2z3z_A Dipeptidyl aminopeptida 95.0 1 3.6E-05 48.1 19.1 24 200-226 93-116 (706)
157 3ow8_A WD repeat-containing pr 95.0 2.8 9.5E-05 40.5 26.5 176 157-421 103-280 (321)
158 1fwx_A Nitrous oxide reductase 94.9 1.6 5.3E-05 47.8 20.1 210 194-464 95-358 (595)
159 3ei3_B DNA damage-binding prot 94.9 3 0.0001 40.4 25.1 207 128-421 75-283 (383)
160 3dwl_C Actin-related protein 2 94.9 0.22 7.4E-06 48.4 12.0 111 288-421 121-237 (377)
161 3zwl_B Eukaryotic translation 94.8 2.8 9.6E-05 39.5 26.3 75 128-223 76-154 (369)
162 2xyi_A Probable histone-bindin 94.8 0.65 2.2E-05 46.8 15.7 156 199-420 242-410 (430)
163 2pm9_A Protein WEB1, protein t 94.8 1 3.4E-05 44.0 16.6 81 128-222 167-251 (416)
164 3mkq_A Coatomer beta'-subunit; 94.7 5.6 0.00019 42.7 28.3 200 129-421 16-218 (814)
165 3zwl_B Eukaryotic translation 94.6 3 0.0001 39.3 25.4 212 127-421 33-250 (369)
166 3frx_A Guanine nucleotide-bind 94.5 3.5 0.00012 39.5 23.2 78 128-226 67-144 (319)
167 4g56_B MGC81050 protein; prote 94.5 1.5 5.2E-05 43.1 17.3 205 129-422 97-303 (357)
168 3k26_A Polycomb protein EED; W 94.4 3.4 0.00012 39.0 19.5 222 157-419 139-365 (366)
169 1w6s_A Methanol dehydrogenase 94.4 6.9 0.00024 42.4 29.7 62 157-227 132-199 (599)
170 1k8k_C P40, ARP2/3 complex 41 94.4 3.6 0.00012 39.1 20.6 216 128-420 54-274 (372)
171 3q7m_A Lipoprotein YFGL, BAMB; 94.3 2.1 7.1E-05 41.9 17.9 95 156-305 249-345 (376)
172 2z3z_A Dipeptidyl aminopeptida 94.3 6.6 0.00023 41.8 23.1 28 394-421 361-392 (706)
173 3jrp_A Fusion protein of prote 93.9 4.4 0.00015 38.4 23.2 215 128-421 13-241 (379)
174 1sq9_A Antiviral protein SKI8; 93.8 4.5 0.00015 39.0 19.0 29 391-420 357-395 (397)
175 4e54_B DNA damage-binding prot 93.8 6.2 0.00021 39.5 21.8 184 157-421 143-328 (435)
176 3sfz_A APAF-1, apoptotic pepti 93.7 12 0.0004 42.8 25.0 212 127-421 616-829 (1249)
177 4a11_B DNA excision repair pro 93.7 5.1 0.00017 38.4 22.4 80 127-225 100-180 (408)
178 1r5m_A SIR4-interacting protei 93.7 5.3 0.00018 38.4 22.7 115 282-420 303-425 (425)
179 2aq5_A Coronin-1A; WD40 repeat 93.5 3.3 0.00011 40.8 17.6 100 157-300 199-301 (402)
180 4aez_A CDC20, WD repeat-contai 93.5 5.3 0.00018 39.4 19.2 139 157-365 240-383 (401)
181 3mkq_A Coatomer beta'-subunit; 93.4 7.2 0.00025 41.9 21.4 202 129-421 58-260 (814)
182 3mmy_A MRNA export factor; mRN 93.3 5.4 0.00018 37.5 24.5 58 391-457 276-333 (368)
183 4a11_B DNA excision repair pro 93.2 6.3 0.00021 37.8 23.2 31 390-421 247-277 (408)
184 3jro_A Fusion protein of prote 93.1 8.3 0.00029 42.2 21.6 107 287-421 121-239 (753)
185 1k32_A Tricorn protease; prote 93.0 15 0.0005 41.7 24.6 54 391-457 559-626 (1045)
186 4ery_A WD repeat-containing pr 93.0 6 0.00021 37.1 27.8 201 128-421 67-269 (312)
187 2pm9_A Protein WEB1, protein t 92.9 7.1 0.00024 37.8 21.7 107 286-421 185-295 (416)
188 3dm0_A Maltose-binding peripla 92.8 12 0.00041 40.0 24.1 201 128-421 432-633 (694)
189 1r5m_A SIR4-interacting protei 92.5 7.8 0.00027 37.2 22.2 72 329-421 248-320 (425)
190 1vyh_C Platelet-activating fac 92.2 10 0.00035 37.8 21.1 30 391-421 341-370 (410)
191 3q7m_A Lipoprotein YFGL, BAMB; 92.1 9.4 0.00032 37.1 31.5 68 136-227 102-170 (376)
192 1k32_A Tricorn protease; prote 92.0 3.6 0.00012 46.7 17.4 130 278-458 349-491 (1045)
193 3ow8_A WD repeat-containing pr 91.9 9.4 0.00032 36.7 23.7 173 157-418 145-319 (321)
194 3o4h_A Acylamino-acid-releasin 91.8 6.1 0.00021 41.2 17.7 102 278-421 122-228 (582)
195 2xyi_A Probable histone-bindin 91.4 3.8 0.00013 41.1 15.1 126 199-369 288-417 (430)
196 3c5m_A Oligogalacturonate lyas 91.2 11 0.00037 36.2 24.0 19 208-226 165-183 (396)
197 1vyh_C Platelet-activating fac 91.1 13 0.00045 36.9 22.3 77 127-224 109-185 (410)
198 4aez_A CDC20, WD repeat-contai 90.8 13 0.00045 36.4 26.8 30 390-420 305-336 (401)
199 4ery_A WD repeat-containing pr 90.6 11 0.00038 35.2 23.6 198 127-421 24-224 (312)
200 1got_B GT-beta; complex (GTP-b 90.4 13 0.00045 35.7 27.2 201 127-421 56-258 (340)
201 3amr_A 3-phytase; beta-propell 90.3 17 0.0006 37.0 19.6 80 330-420 181-263 (355)
202 1xfd_A DIP, dipeptidyl aminope 90.2 12 0.00041 39.7 18.4 26 278-306 126-151 (723)
203 3iz6_a 40S ribosomal protein R 90.1 15 0.00051 36.0 21.2 190 157-420 181-375 (380)
204 3o4h_A Acylamino-acid-releasin 89.9 6.7 0.00023 40.9 15.9 22 396-418 253-274 (582)
205 3azo_A Aminopeptidase; POP fam 89.5 23 0.00078 37.2 22.7 29 392-421 245-275 (662)
206 2pbi_B Guanine nucleotide-bind 89.5 16 0.00055 35.4 26.7 125 287-456 218-343 (354)
207 3ei3_B DNA damage-binding prot 88.6 18 0.00062 34.8 23.9 59 157-226 142-200 (383)
208 2ad6_A Methanol dehydrogenase 88.2 10 0.00035 40.5 16.1 121 137-306 62-194 (571)
209 2xdw_A Prolyl endopeptidase; a 88.1 22 0.00074 38.3 18.8 52 278-353 137-191 (710)
210 2xdw_A Prolyl endopeptidase; a 87.9 32 0.0011 36.9 23.3 29 198-226 135-166 (710)
211 1got_B GT-beta; complex (GTP-b 87.8 20 0.00067 34.4 22.1 173 157-417 165-340 (340)
212 2ynn_A Coatomer subunit beta'; 87.7 19 0.00064 33.9 24.2 201 128-421 15-218 (304)
213 3c5m_A Oligogalacturonate lyas 87.4 8.3 0.00028 37.0 13.5 65 156-226 10-75 (396)
214 3i2n_A WD repeat-containing pr 87.3 19 0.00065 33.6 24.6 110 278-420 180-291 (357)
215 2ymu_A WD-40 repeat protein; u 87.0 28 0.00097 35.4 21.3 67 330-417 510-577 (577)
216 1nr0_A Actin interacting prote 86.7 34 0.0012 36.0 25.3 71 331-420 451-522 (611)
217 1yfq_A Cell cycle arrest prote 86.6 21 0.0007 33.3 22.5 211 157-421 34-283 (342)
218 1kv9_A Type II quinohemoprotei 86.4 41 0.0014 36.5 27.4 73 137-226 66-143 (668)
219 3dwl_C Actin-related protein 2 85.8 15 0.00052 35.1 14.5 74 329-419 206-280 (377)
220 1xfd_A DIP, dipeptidyl aminope 85.8 39 0.0013 35.7 23.3 87 129-227 63-150 (723)
221 3azo_A Aminopeptidase; POP fam 85.7 38 0.0013 35.5 19.6 27 392-419 191-225 (662)
222 1z68_A Fibroblast activation p 85.5 11 0.00037 40.3 14.4 26 278-306 122-147 (719)
223 2ecf_A Dipeptidyl peptidase IV 85.5 16 0.00053 39.0 15.7 15 212-226 65-79 (741)
224 1nr0_A Actin interacting prote 85.5 39 0.0013 35.5 20.3 110 280-421 161-271 (611)
225 3k26_A Polycomb protein EED; W 85.4 24 0.00082 33.0 26.3 65 157-226 45-110 (366)
226 1sq9_A Antiviral protein SKI8; 85.2 27 0.00092 33.4 23.1 31 390-421 293-323 (397)
227 2ymu_A WD-40 repeat protein; u 85.1 35 0.0012 34.7 23.4 70 330-420 428-498 (577)
228 2ynn_A Coatomer subunit beta'; 84.6 27 0.00091 32.8 21.4 180 157-421 78-260 (304)
229 3lrv_A PRE-mRNA-splicing facto 84.3 29 0.001 33.1 22.5 197 135-420 92-292 (343)
230 1pgu_A Actin interacting prote 84.1 39 0.0013 34.3 23.9 176 156-420 427-614 (615)
231 4a5s_A Dipeptidyl peptidase 4 83.9 18 0.00062 39.2 15.5 27 278-307 124-150 (740)
232 4e54_B DNA damage-binding prot 83.9 21 0.00073 35.5 15.0 98 286-420 184-282 (435)
233 3jrp_A Fusion protein of prote 83.7 29 0.001 32.5 21.0 106 287-420 180-287 (379)
234 1tl2_A L10, protein (tachylect 83.3 2.5 8.4E-05 41.0 7.2 104 333-459 45-154 (236)
235 3jro_A Fusion protein of prote 83.2 56 0.0019 35.5 20.8 106 287-420 178-285 (753)
236 3lrv_A PRE-mRNA-splicing facto 83.0 33 0.0011 32.7 23.1 97 287-421 147-245 (343)
237 3iz6_a 40S ribosomal protein R 82.6 38 0.0013 33.0 24.4 105 284-421 175-281 (380)
238 1yiq_A Quinohemoprotein alcoho 82.3 61 0.0021 35.3 28.2 24 399-423 485-508 (689)
239 4a5s_A Dipeptidyl peptidase 4 81.4 63 0.0022 34.8 22.5 82 132-228 67-149 (740)
240 1pgu_A Actin interacting prote 81.3 50 0.0017 33.5 20.2 100 282-421 176-284 (615)
241 4h5i_A Guanine nucleotide-exch 80.8 44 0.0015 32.6 23.9 59 391-457 272-330 (365)
242 2vdu_B TRNA (guanine-N(7)-)-me 80.7 48 0.0016 33.0 23.2 79 128-224 104-184 (450)
243 3frx_A Guanine nucleotide-bind 80.7 39 0.0013 32.0 17.1 140 157-363 177-318 (319)
244 1erj_A Transcriptional repress 80.5 45 0.0015 32.6 23.1 209 128-420 66-287 (393)
245 2wg3_C Hedgehog-interacting pr 80.2 9.3 0.00032 40.1 11.0 142 333-484 18-186 (463)
246 2pbi_B Guanine nucleotide-bind 78.9 48 0.0017 32.0 23.6 176 157-417 177-354 (354)
247 3pe7_A Oligogalacturonate lyas 78.2 48 0.0017 31.6 24.2 27 199-226 91-117 (388)
248 3vu4_A KMHSV2; beta-propeller 77.6 53 0.0018 31.7 24.5 182 157-420 82-271 (355)
249 4h5i_A Guanine nucleotide-exch 75.7 61 0.0021 31.5 23.7 71 329-420 270-343 (365)
250 3dm0_A Maltose-binding peripla 75.7 86 0.003 33.2 21.1 24 203-226 533-556 (694)
251 2bkl_A Prolyl endopeptidase; m 74.5 95 0.0033 33.1 20.6 24 278-301 133-159 (695)
252 1yr2_A Prolyl oligopeptidase; 73.7 1E+02 0.0035 33.2 21.9 25 278-302 175-202 (741)
253 3i2n_A WD repeat-containing pr 73.5 58 0.002 30.2 15.8 55 157-222 191-245 (357)
254 3vl1_A 26S proteasome regulato 73.0 69 0.0023 30.8 28.6 221 128-420 141-365 (420)
255 4aow_A Guanine nucleotide-bind 72.6 60 0.002 29.9 19.9 57 157-226 196-252 (340)
256 4ggc_A P55CDC, cell division c 71.6 60 0.0021 29.6 22.0 59 157-226 46-104 (318)
257 3dw8_B Serine/threonine-protei 70.2 81 0.0028 30.5 25.8 115 278-420 189-315 (447)
258 3fm0_A Protein CIAO1; WDR39,SG 69.2 81 0.0028 30.1 21.9 99 287-419 125-224 (345)
259 3zwu_A Alkaline phosphatase PH 67.4 7.5 0.00026 42.4 6.5 67 391-458 386-494 (592)
260 2aq5_A Coronin-1A; WD40 repeat 67.0 94 0.0032 30.0 23.4 32 391-422 270-301 (402)
261 3iuj_A Prolyl endopeptidase; h 66.0 1.1E+02 0.0039 32.7 15.7 27 277-303 140-169 (693)
262 4aow_A Guanine nucleotide-bind 65.1 85 0.0029 28.8 22.1 31 390-421 308-338 (340)
263 2wg3_C Hedgehog-interacting pr 64.3 37 0.0013 35.4 11.0 64 389-456 139-238 (463)
264 2gop_A Trilobed protease; beta 64.1 34 0.0011 32.2 9.8 28 199-226 24-58 (347)
265 3dw8_B Serine/threonine-protei 63.2 1.1E+02 0.0038 29.5 19.0 82 128-223 179-261 (447)
266 2gop_A Trilobed protease; beta 58.9 1E+02 0.0036 28.7 12.3 17 288-304 42-58 (347)
267 3iuj_A Prolyl endopeptidase; h 57.7 2E+02 0.0069 30.7 21.6 30 197-226 138-170 (693)
268 2bkl_A Prolyl endopeptidase; m 56.1 2.1E+02 0.0071 30.4 21.9 27 198-224 131-160 (695)
269 3fm0_A Protein CIAO1; WDR39,SG 55.3 1.4E+02 0.0049 28.3 22.6 85 330-420 196-283 (345)
270 2oaj_A Protein SNI1; WD40 repe 54.6 2.6E+02 0.009 31.1 22.0 219 128-423 19-245 (902)
271 4a9v_A PHOX; hydrolase, beta-p 52.9 18 0.00063 39.4 6.3 61 389-457 476-549 (592)
272 2pm7_B Protein transport prote 52.8 1.4E+02 0.0049 27.5 20.4 30 391-420 207-238 (297)
273 3hx6_A Type 4 fimbrial biogene 52.6 38 0.0013 36.7 8.7 54 153-209 220-274 (570)
274 3s9j_A Member of DUF4221 famil 52.1 2E+02 0.0069 29.1 23.0 79 134-226 36-116 (369)
275 3v7d_B Cell division control p 51.6 1.8E+02 0.0062 28.4 15.2 53 157-224 333-385 (464)
276 3gre_A Serine/threonine-protei 51.0 1.8E+02 0.0061 28.1 18.2 175 129-359 217-437 (437)
277 4gga_A P55CDC, cell division c 50.4 1.9E+02 0.0064 28.2 22.2 59 157-226 126-184 (420)
278 3bg1_A Protein SEC13 homolog; 49.8 1.7E+02 0.0057 27.4 24.2 29 392-420 216-247 (316)
279 4a9v_A PHOX; hydrolase, beta-p 49.7 48 0.0016 36.1 8.9 72 124-206 473-548 (592)
280 3vu4_A KMHSV2; beta-propeller 49.6 1.8E+02 0.0062 27.8 22.6 56 287-363 215-272 (355)
281 2xzm_R RACK1; ribosome, transl 48.0 1.8E+02 0.0062 27.4 18.0 202 129-420 24-244 (343)
282 3sbq_A Nitrous-oxide reductase 47.0 26 0.00088 38.4 6.2 120 331-462 325-457 (638)
283 3mmy_A MRNA export factor; mRN 46.8 1.7E+02 0.006 26.8 13.5 78 128-226 41-123 (368)
284 2hz6_A Endoplasmic reticulum t 46.0 43 0.0015 33.0 7.5 66 137-226 9-75 (369)
285 3bg1_A Protein SEC13 homolog; 45.0 2E+02 0.0067 26.9 18.1 105 287-419 187-292 (316)
286 1w6s_A Methanol dehydrogenase 41.4 3.6E+02 0.012 28.8 32.4 66 156-226 182-294 (599)
287 3vl1_A 26S proteasome regulato 40.7 2.5E+02 0.0084 26.8 26.2 63 157-224 204-282 (420)
288 1z68_A Fibroblast activation p 40.3 2E+02 0.0068 30.3 12.0 24 201-226 28-51 (719)
289 3odt_A Protein DOA1; ubiquitin 40.1 2.1E+02 0.007 25.7 24.0 53 157-222 40-92 (313)
290 4ggc_A P55CDC, cell division c 39.7 2.1E+02 0.0073 25.7 22.5 30 390-420 286-315 (318)
291 3f3f_A Nucleoporin SEH1; struc 37.3 2.3E+02 0.0078 25.4 26.9 32 389-421 307-338 (351)
292 4gga_A P55CDC, cell division c 34.0 3.3E+02 0.011 26.3 22.1 32 390-421 322-354 (420)
293 1flg_A Protein (quinoprotein e 32.7 4.6E+02 0.016 27.6 30.3 56 392-457 491-546 (582)
294 3v7d_B Cell division control p 31.0 3.8E+02 0.013 26.0 28.5 212 128-421 164-382 (464)
295 2ovr_B FBW7, F-BOX/WD repeat p 27.9 4.2E+02 0.014 25.6 22.1 55 157-226 260-314 (445)
296 2oaj_A Protein SNI1; WD40 repe 27.3 6.7E+02 0.023 27.8 19.3 72 128-223 60-132 (902)
297 4gq1_A NUP37; propeller, trans 26.9 4.3E+02 0.015 25.4 23.5 65 157-223 112-178 (393)
298 3odt_A Protein DOA1; ubiquitin 26.6 3.4E+02 0.012 24.1 19.3 95 286-421 202-297 (313)
299 2r2y_A Protein ADRM1; proteaso 26.4 89 0.0031 28.1 5.3 55 393-457 40-100 (153)
300 2ovr_B FBW7, F-BOX/WD repeat p 23.5 5.1E+02 0.017 25.0 18.8 55 157-226 300-354 (445)
301 2kr0_A Proteasomal ubiquitin r 22.9 1E+02 0.0034 32.1 5.6 55 393-457 41-101 (411)
302 2hz6_A Endoplasmic reticulum t 22.5 1.1E+02 0.0038 29.9 5.9 27 199-226 8-35 (369)
303 1tl2_A L10, protein (tachylect 22.1 1.6E+02 0.0056 28.2 6.6 71 378-458 31-106 (236)
304 3hx6_A Type 4 fimbrial biogene 20.8 8E+02 0.028 26.4 15.1 18 209-226 221-239 (570)
305 3s9j_A Member of DUF4221 famil 20.1 4E+02 0.014 26.9 9.4 74 199-304 38-116 (369)
No 1
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=100.00 E-value=2.9e-94 Score=750.03 Aligned_cols=361 Identities=28% Similarity=0.492 Sum_probs=327.0
Q ss_pred ceEEEEEeeeeeeCCCHHHHHHhhccCCcccCCCeeeeeee--eCCcEEEEecCCCCCCCceeEEEEccCCCCCCC-CCC
Q psy731 30 LTEIFNWKQVDFAFPNEEERRLAQTRGQFVAENCLPVSLDK--WHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNK-SIT 106 (494)
Q Consensus 30 ~~~~~~W~~~df~~p~~~~r~~~~~~g~y~p~~~~p~gv~v--~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~-~~~ 106 (494)
+|++||||+|||+ |+.+|.|+|+|++|+||++ ++||+|||+|||+.|+|+||++|..+.. ++ ...
T Consensus 2 ~~~~~~Wk~ld~~---------ai~~g~y~p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~---~~~~~~ 69 (381)
T 3q6k_A 2 DTQGYKWKQLLYN---------NVTPGSYNPDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNS---LGVKGK 69 (381)
T ss_dssp CCEEEEESSCCBT---------TSCTTSSCGGGCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHH---TTCTTC
T ss_pred cceEEEEEeeccc---------cccCCCcccCccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCC---cccccC
Confidence 6899999999996 9999999999999999999 8999999999999999999999986532 10 012
Q ss_pred CCcc-ccCCCcccccccCCCceEEeeEEEcCCCeEEEEeCCCCC----CCC---CCCCEEEEEECCCC--cEEEEEEcCC
Q psy731 107 SPIL-MPYPSWESNVREARNLTSVVKVQSDPCDRLWALDSGVVE----GKM---EQPPSVQVYDLRQQ--MQIRFFQLKE 176 (494)
Q Consensus 107 sp~l-~PYP~~~~n~~~~~~lvsV~~i~iD~~~~LwvlD~G~~~----~~~---~~~Pklv~~dl~t~--~vi~~~~lp~ 176 (494)
+|+| +|||+| .+|++|+||+++++|+|+||||||+|..+ +.+ .|+|||++|||+|+ +++|+|+||+
T Consensus 70 ~p~ll~PYP~w----~~~~~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~ 145 (381)
T 3q6k_A 70 HSPLLNKFSGH----KTGKELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPT 145 (381)
T ss_dssp SSCCBEECTTC----SSSCSSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCG
T ss_pred CcccccCCCCC----ccccceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCH
Confidence 6888 999998 37999999999999999999999999987 246 89999999999999 9999999998
Q ss_pred CccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccc
Q psy731 177 KTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKT 256 (494)
Q Consensus 177 ~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~ 256 (494)
+
T Consensus 146 ~------------------------------------------------------------------------------- 146 (381)
T 3q6k_A 146 R------------------------------------------------------------------------------- 146 (381)
T ss_dssp G-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 3
Q ss_pred cccccccceeeEEeee-c-CCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeee
Q psy731 257 DYTEESKFSNMVVDVT-S-ANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGM 334 (494)
Q Consensus 257 ~~~~~s~~~~i~VD~~-~-~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gI 334 (494)
++.++|+|++|+||+. + ++|+++||||+|++.+||||||++++++||++|++|+|| ..+.|+|+|++|+|++|+|||
T Consensus 147 ~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd-~~~~~~i~G~~~~~~~Gi~gI 225 (381)
T 3q6k_A 147 LVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAE-RPTKFDYGGKEYEFKAGIFGI 225 (381)
T ss_dssp GCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCC-SCEEEEETTEEEEECCCEEEE
T ss_pred hcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccc-cCcceEECCEEeEeccCceEE
Confidence 3334445555555522 2 379999999999999999999999999999999999999 678999999999999999999
Q ss_pred eeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEE
Q psy731 335 SLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVG 414 (494)
Q Consensus 335 aLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~ 414 (494)
||||++.+|+|+||||||+|++||+|+|++|+|+++ ..+|+.+|+||+++|+.|+++|+++|+|||++++++||+
T Consensus 226 aLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~-----~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~ 300 (381)
T 3q6k_A 226 TLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGG-----KLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVS 300 (381)
T ss_dssp EECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTC-----CCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEE
T ss_pred EecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcch-----hhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEE
Confidence 999998888899999999999999999999999874 578999999987788889999768999999999999999
Q ss_pred EEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEecCchhhhcCCC-CCCcccEEEEEE-echhhhcCCCCC
Q psy731 415 CWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLSNKLPVFLYSKL-KPEDINVRIFKS-TVRNAIKGTVCD 492 (494)
Q Consensus 415 ~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvlsnrl~~~~~~~~-~~~~~nfrI~r~-~~~~~i~~t~C~ 492 (494)
|||+++. +|+++|+++|++|+ +|+||+++++|.+|+|||++||||+|+++++ |.+++||||||+ +++++|+||+|+
T Consensus 301 ~w~~~~~-~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~sn~l~~~~~g~l~d~~~~nfrI~r~~~~~~~i~~t~C~ 378 (381)
T 3q6k_A 301 CWNTQKM-PLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMSNGFPPIRKSEKFKYDFPRYRLMRIMDTQEAIAGTACD 378 (381)
T ss_dssp EEETTSC-SBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEECSCCSSTTGGGCCCSSCSEEEEEESCHHHHHTTSTTS
T ss_pred EEeCCCC-ccccCceEEEEECC-CccccCeEEECCCCeEEEEECcchHhhcCCcCCCCcCCEEEEEecCHHHHhcCCCCC
Confidence 9999853 79999999999996 9999999999999999999999999999998 999999999999 999999999998
Q ss_pred C
Q psy731 493 E 493 (494)
Q Consensus 493 ~ 493 (494)
+
T Consensus 379 ~ 379 (381)
T 3q6k_A 379 M 379 (381)
T ss_dssp C
T ss_pred C
Confidence 6
No 2
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=4.4e-41 Score=339.17 Aligned_cols=300 Identities=20% Similarity=0.281 Sum_probs=250.1
Q ss_pred Ceeeeeeee-CCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCeEE
Q psy731 63 CLPVSLDKW-HDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDRLW 141 (494)
Q Consensus 63 ~~p~gv~v~-~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~Lw 141 (494)
..|.||++. +||+|++.|||..|+ .+|.++. . +++.|||+|+-. .|.++.+++++.+|+|++||
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~-~~l~~~~--~----------g~~~~~p~~~~~--~~~~~~~p~gv~~d~~g~L~ 81 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPE-MQVAELT--Q----------DGLIPFPPQSGN--AIITFDTVLGIKSDGNGIVW 81 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCS-CSEEEEE--T----------TEEEESCCCCSS--CCCCCSCEEEEEECSSSEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCc-eEEEEEC--C----------CCeecCCCcccC--cccceeEeeEEEEcCCCcEE
Confidence 689999996 899999999998777 8999997 2 468999998632 57899999999999999999
Q ss_pred EEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCC
Q psy731 142 ALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTN 221 (494)
Q Consensus 142 vlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~ 221 (494)
|+|.|. .+.|.++|++||++++++++++.+|+. ...+.
T Consensus 82 v~D~g~---~~~~~~~i~~~d~~tg~~~~~~~~~~~-~~~~~-------------------------------------- 119 (343)
T 2qe8_A 82 MLDNGN---QSKSVPKLVAWDTLNNQLSRVIYLPPP-ITLSN-------------------------------------- 119 (343)
T ss_dssp EEECHH---HHTSCCEEEEEETTTTEEEEEEECCTT-TSCTT--------------------------------------
T ss_pred EEcCCC---CcCCCCeEEEEECCCCeEEEEEECChh-hcccc--------------------------------------
Confidence 999985 246788999999999999999999862 11222
Q ss_pred ceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC---CCCeEEEEEcCC
Q psy731 222 DSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS---GHNHIVVYNYRT 298 (494)
Q Consensus 222 ~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~---~~~gliVydl~~ 298 (494)
+++++++||. +++++||+|. ..++|+|||+++
T Consensus 120 ----------------------------------------~~~~~v~vd~-----~~g~~yvtd~~~~~~~~i~v~d~~~ 154 (343)
T 2qe8_A 120 ----------------------------------------SFVNDLAVDL-----IHNFVYISDPAPDDKAALIRVDLQT 154 (343)
T ss_dssp ----------------------------------------CCCCEEEEET-----TTTEEEEEECCSGGGCEEEEEETTT
T ss_pred ----------------------------------------cccceEEEec-----CCCEEEEEcCccCCCCeEEEEECCC
Confidence 3445555553 2468888888 778999999999
Q ss_pred CcEEEEec--CCcccCCCCcceEEcCEEee----------eecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhc
Q psy731 299 NDSHIIHH--NYLHFDPLFGDFTIGGVNFQ----------WQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQ 366 (494)
Q Consensus 299 ~~swrv~~--~~~~~dP~~~~~~v~G~~f~----------~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~ 366 (494)
++.||+.+ .++.++| ..+.++|+.|. |..|++|||+||+ +++|||+++.++++|+++++.|+
T Consensus 155 g~~~r~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d----g~~ly~~~~~~~~l~~~~~~~~~ 228 (343)
T 2qe8_A 155 GLAARVLQGYPGIAPED--IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE----NEWLYLSPMHSTSMYRIKSADLS 228 (343)
T ss_dssp CCEEEECTTCTTTSCCS--CCCEETTEECBEECTTSCEECCCCCEEEEEECTT----SCEEEEEESSCSEEEEEEHHHHT
T ss_pred CCEEEEecCCCcccccc--cceeECCEEEEeccCCCceeceecccceeEeccC----CCEEEEEeCCCCeEEEEEHHHhc
Confidence 99999984 4777665 67888998886 6789999999997 37999999999999999999999
Q ss_pred CCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeC-CCCccccccceeeeeecCCeEecccce
Q psy731 367 NRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNT-FRGEEYNEKSMGLVAEDNATLIYPSDI 445 (494)
Q Consensus 367 ~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~-~~~~~~~~~~~~~v~~d~~~l~~pd~~ 445 (494)
+..+...+....++.+|++| +++|+++| .+|+||+++...++|.|||+ ++ ++.+++.+ +++.||+++
T Consensus 229 ~~~~~~~~~~~~~~~~g~~g---~pdgia~d-~~G~l~va~~~~~~V~~~d~~~G-------~~~~~~~~-~~~~~p~~v 296 (343)
T 2qe8_A 229 NLQLTDAELGSKIERYSEKP---ICDGISID-KDHNIYVGDLAHSAIGVITSADR-------AYKLLVTD-EKLSWTDSF 296 (343)
T ss_dssp CTTCCHHHHHTTCEEEEECC---SCSCEEEC-TTCCEEEEEGGGTEEEEEETTTT-------EEEEEEEC-GGGSCEEEE
T ss_pred CCCCChhhhhcceEecccCC---CCceEEEC-CCCCEEEEccCCCeEEEEECCCC-------CEEEEEEC-CceecCCee
Confidence 88775555566778888874 68999999 78999999999999999999 55 35677776 578999999
Q ss_pred EEcCCceEEEEecCch---hhhcCCCCCCcccEEEEEEech
Q psy731 446 RVDRTGVLWVLSNKLP---VFLYSKLKPEDINVRIFKSTVR 483 (494)
Q Consensus 446 ~id~~g~Lwvlsnrl~---~~~~~~~~~~~~nfrI~r~~~~ 483 (494)
+++.+|.|||++++++ .|.++ ++.++.||+|||+++.
T Consensus 297 a~~~~g~l~v~~~~~~~~~~f~~~-~~~~~~~~~i~~~~~~ 336 (343)
T 2qe8_A 297 NFGSDGYLYFDCNQLHHSAPLNAG-ENISAPPYYIFRLKPL 336 (343)
T ss_dssp EECTTSCEEEEECCGGGSGGGBTT-CCCCCSCEEEEEECCS
T ss_pred EECCCCcEEEEeCccccccccccC-CCcCcCCeEEEEEECC
Confidence 9999999999998664 46654 8999999999999986
No 3
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.74 E-value=1.1e-16 Score=166.58 Aligned_cols=217 Identities=16% Similarity=0.216 Sum_probs=147.9
Q ss_pred CCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEee-cC-CCCCcEEEEeeCCCCeE
Q psy731 136 PCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVT-SA-NCDNAFLYIADSGHNHI 213 (494)
Q Consensus 136 ~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~-~~-~c~~~~vYItDs~~~~i 213 (494)
+.++|+++|+.+.+ ...+.+|.++.+.+. ++|+|+|++||++ +. +|+++||||||++.+||
T Consensus 121 ~~pkLv~~DL~t~~-----~~li~~y~~p~~~~~------------~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gL 183 (381)
T 3q6k_A 121 HRPAIVAYDLKQPN-----YPEVVRYYFPTRLVE------------KPTYFGGFAVDVANPKGDCSETFVYITNFLRGAL 183 (381)
T ss_dssp CCCEEEEEESSSTT-----CCEEEEEECCGGGCC------------CGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEE
T ss_pred CCceEEEEECCCCC-----ceeEEEEECCHHhcc------------cCCccceEEEecccCCCCCCccEEEEEcCCCCcE
Confidence 46799999999872 127889999887664 4699999999954 33 79999999999999999
Q ss_pred EEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEE
Q psy731 214 VVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVV 293 (494)
Q Consensus 214 IVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliV 293 (494)
||||+++|++||+.|++|+|| .++.|+|+|+. |++++ ....|++.... .++...+|..-+
T Consensus 184 IVydl~~~~swRv~~~~~~pd-~~~~~~i~G~~---~~~~~--------Gi~gIaLsp~~-~~~~~~LYf~pl------- 243 (381)
T 3q6k_A 184 FIYDHKKQDSWNVTHPTFKAE-RPTKFDYGGKE---YEFKA--------GIFGITLGDRD-SEGNRPAYYLAG------- 243 (381)
T ss_dssp EEEETTTTEEEEEECGGGSCC-SCEEEEETTEE---EEECC--------CEEEEEECCCC-TTSCCEEEEEES-------
T ss_pred EEEECCCCcEEEEccCCCccc-cCcceEECCEE---eEecc--------CceEEEecCCc-CCCCeEEEEEEC-------
Confidence 999999999999999999999 88999999887 66543 45667776431 233566776654
Q ss_pred EEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecc--eee--eeeccCCCCCceeEEEeeCCCcceEeeechhhcCCC
Q psy731 294 YNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTG--IHG--MSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRS 369 (494)
Q Consensus 294 ydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~G--i~g--IaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~ 369 (494)
...+-++|....+.-......+..-|+. | ..| ++.++ . ...|||..+....++...+.- ..
T Consensus 244 ---ss~~ly~V~T~~L~~~~~~~~v~~~G~k-----g~~s~~~~~~~D~--~--~G~ly~~~~~~~aI~~w~~~~---~~ 308 (381)
T 3q6k_A 244 ---SAIKVYSVNTKELKQKGGKLNPELLGNR-----GKYNDAIALAYDP--K--TKVIFFAEANTKQVSCWNTQK---MP 308 (381)
T ss_dssp ---SCSEEEEEEHHHHSSTTCCCCCEEEEEC-----CTTCCEEEEEECT--T--TCEEEEEESSSSEEEEEETTS---CS
T ss_pred ---CCCcEEEEEHHHhhCcchhhceEEeeec-----CCCCCcceEEEeC--C--CCeEEEEeccCCeEEEEeCCC---Cc
Confidence 4444555543322211122333333332 2 344 45532 2 249999999998898887741 01
Q ss_pred cCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccC
Q psy731 370 LDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLV 409 (494)
Q Consensus 370 ~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~ 409 (494)
+.. +.++.+..-....-.+++.+| .+|.||+..-.
T Consensus 309 ~~~----~n~~~l~~d~~l~~pd~~~i~-~~g~Lwv~sn~ 343 (381)
T 3q6k_A 309 LRM----KNTDVVYTSSRFVFGTDISVD-SKGGLWFMSNG 343 (381)
T ss_dssp BCG----GGEEEEEECTTCCSEEEEEEC-TTSCEEEEECS
T ss_pred ccc----CceEEEEECCCccccCeEEEC-CCCeEEEEECc
Confidence 111 223333332123457899999 89999986533
No 4
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=2.2e-11 Score=115.98 Aligned_cols=271 Identities=9% Similarity=0.094 Sum_probs=179.6
Q ss_pred CCeeeeeee-eCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCeE
Q psy731 62 NCLPVSLDK-WHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDRL 140 (494)
Q Consensus 62 ~~~p~gv~v-~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~L 140 (494)
..-|.++.+ .+|++|++-.. ...|..+..+ + .+..++. ...+..+.++.+|.+++|
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~-----~~~v~~~~~~-~----------~~~~~~~-------~~~~~~~~~i~~~~~g~l 75 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHK-----ANKISSLDQS-G----------RIKEFEV-------PTPDAKVMCLIVSSLGDI 75 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-S----------CEEEEEC-------SSTTCCEEEEEECTTSCE
T ss_pred CCCcceeeECCCCCEEEEcCC-----CCeEEEECCC-C----------ceEEEEC-------CCCCCcceeEEECCCCCE
Confidence 456788888 47999998642 1245555432 1 2222221 123467889999999999
Q ss_pred EEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccC
Q psy731 141 WALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRT 220 (494)
Q Consensus 141 wvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~ 220 (494)
|+.+.+.. .|.+||.. +++ +++.++. .......+++| .++.+|+++...+.|.+||.+
T Consensus 76 ~v~~~~~~--------~v~~~d~~-g~~-~~~~~~~-----~~~~~~~i~~~------~~g~l~v~~~~~~~i~~~~~~- 133 (300)
T 2qc5_A 76 WFTENGAN--------KIGKLSKK-GGF-TEYPLPQ-----PDSGPYGITEG------LNGDIWFTQLNGDRIGKLTAD- 133 (300)
T ss_dssp EEEETTTT--------EEEEECTT-SCE-EEEECSS-----TTCCEEEEEEC------STTCEEEEETTTTEEEEECTT-
T ss_pred EEEecCCC--------eEEEECCC-CCe-EEecCCC-----CCCCCccceEC------CCCCEEEEccCCCeEEEECCC-
Confidence 99998766 79999988 666 4576665 33566777776 356799999999999999987
Q ss_pred CceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCc
Q psy731 221 NDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTND 300 (494)
Q Consensus 221 ~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~ 300 (494)
++..++.. .........+++|. ++.+|+++....+|.+||. +++
T Consensus 134 g~~~~~~~-----------------------------~~~~~~~~~i~~d~------~g~l~v~~~~~~~i~~~~~-~g~ 177 (300)
T 2qc5_A 134 GTIYEYDL-----------------------------PNKGSYPAFITLGS------DNALWFTENQNNSIGRITN-TGK 177 (300)
T ss_dssp SCEEEEEC-----------------------------SSTTCCEEEEEECT------TSSEEEEETTTTEEEEECT-TCC
T ss_pred CCEEEccC-----------------------------CCCCCCceeEEECC------CCCEEEEecCCCeEEEECC-CCc
Confidence 76654421 01123456677773 2349999988889999998 555
Q ss_pred EEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceE
Q psy731 301 SHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFK 380 (494)
Q Consensus 301 swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~ 380 (494)
.-++..+ .+ .....+|+++++ ..||+....+..++.+.. +... .
T Consensus 178 ~~~~~~~----~~--------------~~~~~~i~~d~~-----g~l~v~~~~~~~i~~~~~----~g~~---------~ 221 (300)
T 2qc5_A 178 LEEYPLP----TN--------------AAAPVGITSGND-----GALWFVEIMGNKIGRITT----TGEI---------S 221 (300)
T ss_dssp EEEEECS----ST--------------TCCEEEEEECTT-----SSEEEEETTTTEEEEECT----TCCE---------E
T ss_pred EEEeeCC----CC--------------CCCcceEEECCC-----CCEEEEccCCCEEEEEcC----CCcE---------E
Confidence 4333211 00 023567999864 279998776667877754 1111 1
Q ss_pred EecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEec
Q psy731 381 VMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLSN 458 (494)
Q Consensus 381 ~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvlsn 458 (494)
.+...+......++++| .+|+||++....+.|.++++++ .+ ..... +.....|.++.+|++|.||+.+.
T Consensus 222 ~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~~g--~~-----~~~~~-~~~~~~~~~i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 222 EYDIPTPNARPHAITAG-KNSEIWFTEWGANQIGRITNDN--TI-----QEYQL-QTENAEPHGITFGKDGSVWFALK 290 (300)
T ss_dssp EEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEECTTS--CE-----EEEEC-CSTTCCCCCEEECTTSCEEEECS
T ss_pred EEECCCCCCCceEEEEC-CCCCEEEeccCCCeEEEECCCC--cE-----EEEEC-CccCCccceeEeCCCCCEEEEcc
Confidence 11001112345689999 7899999999999999999965 33 12211 12345799999999999999864
No 5
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.53 E-value=1.5e-11 Score=121.38 Aligned_cols=259 Identities=12% Similarity=0.110 Sum_probs=167.6
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
....++.+|+.++||+.|.... +|++||..+ ++...+.++. ....+++| .++.+||+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~--------~I~~~d~~g-~~~~~~~~~~--------~p~gia~~------~dG~l~va 88 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVG--------EIVSITPDG-NQQIHATVEG--------KVSGLAFT------SNGDLVAT 88 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTT--------EEEEECTTC-CEEEEEECSS--------EEEEEEEC------TTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCC--------eEEEECCCC-ceEEEEeCCC--------CceeEEEc------CCCcEEEE
Confidence 4567889999999999998765 899999876 4555555443 35667775 34559999
Q ss_pred eCCCC--eEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 207 DSGHN--HIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 207 Ds~~~--~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
|.+.. .|+++|..+|+..++... ......+.+++. .+..+|++
T Consensus 89 d~~~~~~~v~~~d~~~g~~~~~~~~-----------------------------~~~~~~~g~~~~------~~~~~~v~ 133 (306)
T 2p4o_A 89 GWNADSIPVVSLVKSDGTVETLLTL-----------------------------PDAIFLNGITPL------SDTQYLTA 133 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEEC-----------------------------TTCSCEEEEEES------SSSEEEEE
T ss_pred eccCCcceEEEEcCCCCeEEEEEeC-----------------------------CCccccCccccc------CCCcEEEE
Confidence 97754 599999999987666210 111223344442 24678999
Q ss_pred cCCCCeEEEEEcCCCc--EEEEecCCccc-CCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeee
Q psy731 285 DSGHNHIVVYNYRTND--SHIIHHNYLHF-DPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVT 361 (494)
Q Consensus 285 D~~~~gliVydl~~~~--swrv~~~~~~~-dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~ 361 (494)
|.....|.++|..+++ .|+.. ..... .+. . .+ .+.+|| +|+ +++||+.-....+++++.
T Consensus 134 d~~~g~i~~~d~~~~~~~v~~~~-~~~~~~~~~-~-------~~---~~pngi--s~d----g~~lyv~d~~~~~I~~~~ 195 (306)
T 2p4o_A 134 DSYRGAIWLIDVVQPSGSIWLEH-PMLARSNSE-S-------VF---PAANGL--KRF----GNFLYVSNTEKMLLLRIP 195 (306)
T ss_dssp ETTTTEEEEEETTTTEEEEEEEC-GGGSCSSTT-C-------CS---CSEEEE--EEE----TTEEEEEETTTTEEEEEE
T ss_pred ECCCCeEEEEeCCCCcEeEEEEC-Ccccccccc-C-------CC---CcCCCc--CcC----CCEEEEEeCCCCEEEEEE
Confidence 9888899999988653 33322 21111 110 0 11 134566 665 369999888888888887
Q ss_pred chhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEec
Q psy731 362 TKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIY 441 (494)
Q Consensus 362 T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~ 441 (494)
.+- +..+. ..+.+.+. ...+|+++| .+|+||+++...+.|.++++++ .+ ..+..-...+.+
T Consensus 196 ~~~--~g~~~------~~~~~~~~---~~P~gi~vd-~dG~l~va~~~~~~V~~~~~~G--~~-----~~~~~~~~~~~~ 256 (306)
T 2p4o_A 196 VDS--TDKPG------EPEIFVEQ---TNIDDFAFD-VEGNLYGATHIYNSVVRIAPDR--ST-----TIIAQAEQGVIG 256 (306)
T ss_dssp BCT--TSCBC------CCEEEEES---CCCSSEEEB-TTCCEEEECBTTCCEEEECTTC--CE-----EEEECGGGTCTT
T ss_pred eCC--CCCCC------ccEEEecc---CCCCCeEEC-CCCCEEEEeCCCCeEEEECCCC--CE-----EEEeecccccCC
Confidence 642 12211 12223321 246899999 7999999999999999999987 32 222221123678
Q ss_pred ccceEEc---CC-ceEEEEecCchhhhcCCCCCCcccEEEEEEech
Q psy731 442 PSDIRVD---RT-GVLWVLSNKLPVFLYSKLKPEDINVRIFKSTVR 483 (494)
Q Consensus 442 pd~~~id---~~-g~Lwvlsnrl~~~~~~~~~~~~~nfrI~r~~~~ 483 (494)
|.++.++ ++ +.|||+++.- .+...+.....-.|+|+++.
T Consensus 257 p~~~a~~g~~~d~~~LyVt~~~~---~~~~~~~~~~~g~v~~i~~~ 299 (306)
T 2p4o_A 257 STAVAFGQTEGDCTAIYVVTNGG---MFLPPPTGVVPANVVRLEVG 299 (306)
T ss_dssp EEEEEECCSTTTTTEEEEEECTT---SSSCCTTCCCCEEEEEEECS
T ss_pred ceEEEEecccCCCCEEEEECCCC---cccCCCcccccceEEEEecC
Confidence 9999997 56 5899998752 11112223445679999864
No 6
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.49 E-value=5e-12 Score=132.84 Aligned_cols=248 Identities=11% Similarity=0.081 Sum_probs=161.9
Q ss_pred cCCCceEEeeEEEcC---CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCC
Q psy731 122 EARNLTSVVKVQSDP---CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANC 198 (494)
Q Consensus 122 ~~~~lvsV~~i~iD~---~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c 198 (494)
.|.+|.++.++.+|+ .++|||.|.+ . +|.++|+.++++..... .....+.+++|.
T Consensus 134 ~a~~~~~P~gvavd~~s~~g~Lyv~D~~-~--------~I~~id~~~g~v~~~~~--------~~~~P~giavd~----- 191 (433)
T 4hw6_A 134 DCGAFDNIWRMMFDPNSNYDDLYWVGQR-D--------AFRHVDFVNQYVDIKTT--------NIGQCADVNFTL----- 191 (433)
T ss_dssp SCCCCSCCCEEEECTTTTTCEEEEECBT-S--------CEEEEETTTTEEEEECC--------CCSCEEEEEECT-----
T ss_pred HhcccCCCceEEEccccCCCEEEEEeCC-C--------CEEEEECCCCEEEEeec--------CCCCccEEEECC-----
Confidence 355799999999997 4999999998 3 79999999988865321 345677888873
Q ss_pred CCcEEEEeeCCC----CeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecC
Q psy731 199 DNAFLYIADSGH----NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSA 274 (494)
Q Consensus 199 ~~~~vYItDs~~----~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~ 274 (494)
++.+||+|... .++++++...+..+.. .........++++|.
T Consensus 192 -dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~------------------------------~~~~~~~P~giavd~--- 237 (433)
T 4hw6_A 192 -NGDMVVVDDQSSDTNTGIYLFTRASGFTERL------------------------------SLCNARGAKTCAVHP--- 237 (433)
T ss_dssp -TCCEEEEECCSCTTSEEEEEECGGGTTCCEE------------------------------EEEECSSBCCCEECT---
T ss_pred -CCCEEEEcCCCCcccceEEEEECCCCeeccc------------------------------cccccCCCCEEEEeC---
Confidence 33399999854 3566666543332211 011233467788884
Q ss_pred CCCCcEEEEecCCCCeEEEEEcCCCcE-EEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC
Q psy731 275 NCDDAFLYIADSGHNHIVVYNYRTNDS-HIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA 353 (494)
Q Consensus 275 ~c~~~~~YI~D~~~~gliVydl~~~~s-wrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls 353 (494)
.++.+|++|...+.|.++|..++.. ..+..... .+ .-++||++|++ ++||+.-..
T Consensus 238 --~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~--~~----------------~~~~ia~dpdG----~~LYvad~~ 293 (433)
T 4hw6_A 238 --QNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT--KG----------------SNFHIVWHPTG----DWAYIIYNG 293 (433)
T ss_dssp --TTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC--CS----------------SCEEEEECTTS----SEEEEEETT
T ss_pred --CCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC--CC----------------CcccEEEeCCC----CEEEEEeCC
Confidence 2578999999999999999987765 43321110 00 12469999873 689998888
Q ss_pred CcceEeeech----hhcCCCc-CccccccceE-EecccCCCCCCCeEEe---------eCCCCeEEEeccCCCeEEEEeC
Q psy731 354 STTEFAVTTK----VLQNRSL-DFSRSNFDFK-VMGSRGTGSQSGASSL---------DEETGVIFYALLVKSGVGCWNT 418 (494)
Q Consensus 354 s~~ly~V~T~----~L~~~~~-~~~~~~~~v~-~~G~~G~~~qs~g~~~---------D~~~G~ly~~~~~~~aI~~w~~ 418 (494)
..+++++... .|..... ....-...+. -.+.........|+++ | ..|+||+++...+.|.++++
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECT
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECC
Confidence 8888887632 2211110 0000000000 0001111234567999 8 89999999999999999999
Q ss_pred CCCccccccceeeeeec---------------CCeEecccceEEc-CCceEEEEe
Q psy731 419 FRGEEYNEKSMGLVAED---------------NATLIYPSDIRVD-RTGVLWVLS 457 (494)
Q Consensus 419 ~~~~~~~~~~~~~v~~d---------------~~~l~~pd~~~id-~~g~Lwvls 457 (494)
++ . +.+++-. ..+|.+|.++.+| .+|.|||.-
T Consensus 373 ~G--~-----v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD 420 (433)
T 4hw6_A 373 EG--R-----VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGD 420 (433)
T ss_dssp TS--E-----EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEE
T ss_pred CC--C-----EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEe
Confidence 77 3 2333321 2368999999999 899999984
No 7
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.49 E-value=1.9e-11 Score=117.40 Aligned_cols=240 Identities=10% Similarity=0.080 Sum_probs=158.7
Q ss_pred CCceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 124 RNLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 124 ~~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
..+.++.++.+|+.++|||.|.+.. .|.+||+. ++.++++..+.. .....+....++++- .++.+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~--------~i~~~d~~-g~~~~~~~~~~~-~~~~~~~p~~i~~~~-----~~g~l 91 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNH--------RIQIFDKE-GRFKFQFGECGK-RDSQLLYPNRVAVVR-----NSGDI 91 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGT--------EEEEECTT-SCEEEEECCBSS-STTCBSSEEEEEEET-----TTTEE
T ss_pred CccCCCceEEECCCCCEEEEECCCC--------EEEEECCC-CcEEEEecccCC-CcccccCceEEEEEc-----CCCeE
Confidence 4578899999999999999998766 89999987 666666643220 001123455666641 57899
Q ss_pred EEeeCC-CCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEE
Q psy731 204 YIADSG-HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLY 282 (494)
Q Consensus 204 YItDs~-~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~Y 282 (494)
||+|.. .+.|.+||.+....+++.. ........|++|. ++.+|
T Consensus 92 ~v~~~~~~~~i~~~d~~g~~~~~~~~------------------------------~~~~~~~~i~~~~------~g~l~ 135 (286)
T 1q7f_A 92 IVTERSPTHQIQIYNQYGQFVRKFGA------------------------------TILQHPRGVTVDN------KGRII 135 (286)
T ss_dssp EEEECGGGCEEEEECTTSCEEEEECT------------------------------TTCSCEEEEEECT------TSCEE
T ss_pred EEEcCCCCCEEEEECCCCcEEEEecC------------------------------ccCCCceEEEEeC------CCCEE
Confidence 999975 7889999944333333311 0112356777773 34599
Q ss_pred EecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeec
Q psy731 283 IADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTT 362 (494)
Q Consensus 283 I~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T 362 (494)
++|.....|.+||......+.+....- .....+|+++|+ | .||+.-.....++....
T Consensus 136 v~~~~~~~i~~~~~~g~~~~~~~~~~~------------------~~~p~~i~~~~~---g--~l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 136 VVECKVMRVIIFDQNGNVLHKFGCSKH------------------LEFPNGVVVNDK---Q--EIFISDNRAHCVKVFNY 192 (286)
T ss_dssp EEETTTTEEEEECTTSCEEEEEECTTT------------------CSSEEEEEECSS---S--EEEEEEGGGTEEEEEET
T ss_pred EEECCCCEEEEEcCCCCEEEEeCCCCc------------------cCCcEEEEECCC---C--CEEEEECCCCEEEEEcC
Confidence 999988999999977655555432210 023567999885 2 58886654446665542
Q ss_pred hhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCC-eEEEEeCCCCccccccceeeeeecCCeEec
Q psy731 363 KVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKS-GVGCWNTFRGEEYNEKSMGLVAEDNATLIY 441 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~-aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~ 441 (494)
+ . ..++.++..|......++++| .+|+||+++...+ .|.+|++++ .+ +..+... .....
T Consensus 193 ~----g--------~~~~~~~~~g~~~~p~~i~~d-~~G~l~v~~~~~~~~i~~~~~~g--~~----~~~~~~~-~~~~~ 252 (286)
T 1q7f_A 193 E----G--------QYLRQIGGEGITNYPIGVGIN-SNGEILIADNHNNFNLTIFTQDG--QL----ISALESK-VKHAQ 252 (286)
T ss_dssp T----C--------CEEEEESCTTTSCSEEEEEEC-TTCCEEEEECSSSCEEEEECTTS--CE----EEEEEES-SCCSC
T ss_pred C----C--------CEEEEEccCCccCCCcEEEEC-CCCCEEEEeCCCCEEEEEECCCC--CE----EEEEccc-CCCCc
Confidence 1 1 122333333322446789999 7899999999887 999999887 32 3344332 33456
Q ss_pred ccceEEcCCceEEEEe
Q psy731 442 PSDIRVDRTGVLWVLS 457 (494)
Q Consensus 442 pd~~~id~~g~Lwvls 457 (494)
|.++.++++|.|||.+
T Consensus 253 ~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 253 CFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEEEEEETTTEEEEEE
T ss_pred ceeEEECCCCcEEEEC
Confidence 8899999999999984
No 8
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=3.1e-11 Score=114.88 Aligned_cols=230 Identities=10% Similarity=0.108 Sum_probs=158.0
Q ss_pred CceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE
Q psy731 125 NLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 125 ~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
.+..+.++.+|++++|||.+.+.. .|.+||.. +++.+ +.++. .......+++| .++.+|
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~--------~v~~~~~~-~~~~~-~~~~~-----~~~~~~~i~~~------~~g~l~ 76 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKAN--------KISSLDQS-GRIKE-FEVPT-----PDAKVMCLIVS------SLGDIW 76 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTT--------EEEEECTT-SCEEE-EECSS-----TTCCEEEEEEC------TTSCEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCC--------eEEEECCC-CceEE-EECCC-----CCCcceeEEEC------CCCCEE
Confidence 456778899999999999998765 89999988 66553 66664 33556677776 466799
Q ss_pred EeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 205 IADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 205 ItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
+++...+.|.+||.. ++..++.. .........+++|. ++.+|++
T Consensus 77 v~~~~~~~v~~~d~~-g~~~~~~~-----------------------------~~~~~~~~~i~~~~------~g~l~v~ 120 (300)
T 2qc5_A 77 FTENGANKIGKLSKK-GGFTEYPL-----------------------------PQPDSGPYGITEGL------NGDIWFT 120 (300)
T ss_dssp EEETTTTEEEEECTT-SCEEEEEC-----------------------------SSTTCCEEEEEECS------TTCEEEE
T ss_pred EEecCCCeEEEECCC-CCeEEecC-----------------------------CCCCCCCccceECC------CCCEEEE
Confidence 999999999999988 76654421 01123456777773 3568999
Q ss_pred cCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechh
Q psy731 285 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKV 364 (494)
Q Consensus 285 D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~ 364 (494)
+....+|.+||.+ ++..++.... + .....+|+++++ | .||+....+..++++..
T Consensus 121 ~~~~~~i~~~~~~-g~~~~~~~~~----~--------------~~~~~~i~~d~~---g--~l~v~~~~~~~i~~~~~-- 174 (300)
T 2qc5_A 121 QLNGDRIGKLTAD-GTIYEYDLPN----K--------------GSYPAFITLGSD---N--ALWFTENQNNSIGRITN-- 174 (300)
T ss_dssp ETTTTEEEEECTT-SCEEEEECSS----T--------------TCCEEEEEECTT---S--SEEEEETTTTEEEEECT--
T ss_pred ccCCCeEEEECCC-CCEEEccCCC----C--------------CCCceeEEECCC---C--CEEEEecCCCeEEEECC--
Confidence 9888899999987 5544333111 0 023567999875 2 49998776667877753
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccc
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSD 444 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~ 444 (494)
+... ..+...+......++++| .+|+||++....+.|.++++++ .+ ..+.. +..+..|.+
T Consensus 175 --~g~~---------~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~~g--~~-----~~~~~-~~~~~~~~~ 234 (300)
T 2qc5_A 175 --TGKL---------EEYPLPTNAAAPVGITSG-NDGALWFVEIMGNKIGRITTTG--EI-----SEYDI-PTPNARPHA 234 (300)
T ss_dssp --TCCE---------EEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECTTC--CE-----EEEEC-SSTTCCEEE
T ss_pred --CCcE---------EEeeCCCCCCCcceEEEC-CCCCEEEEccCCCEEEEEcCCC--cE-----EEEEC-CCCCCCceE
Confidence 1111 111111112346789999 7899999999999999999965 32 12211 123567999
Q ss_pred eEEcCCceEEEEe
Q psy731 445 IRVDRTGVLWVLS 457 (494)
Q Consensus 445 ~~id~~g~Lwvls 457 (494)
+.+|++|.|||.+
T Consensus 235 i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 235 ITAGKNSEIWFTE 247 (300)
T ss_dssp EEECSTTCEEEEE
T ss_pred EEECCCCCEEEec
Confidence 9999999999997
No 9
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.47 E-value=8e-12 Score=124.24 Aligned_cols=266 Identities=11% Similarity=0.083 Sum_probs=166.6
Q ss_pred CceEEeeEEEcCCCeEEEEeCCCCC-------C---------CCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccc
Q psy731 125 NLTSVVKVQSDPCDRLWALDSGVVE-------G---------KMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSN 188 (494)
Q Consensus 125 ~lvsV~~i~iD~~~~LwvlD~G~~~-------~---------~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d 188 (494)
.|-.|.++.+|++++|||.|.+... . .......|.++|..++++++.+.- . .-....+
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~-----~~~~p~g 95 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK-N-----LFYLPHG 95 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT-T-----TCSSEEE
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC-C-----ccCCceE
Confidence 4778999999999999999988731 0 011224799999999999875531 1 2234567
Q ss_pred eEEEeecCCCCCcEEEEeeCCCCeEEEEEccCC--ceeEEecCccccCCCCCccccCCccceeeeeccccccccccccee
Q psy731 189 MVVDVTSANCDNAFLYIADSGHNHIVVYNYRTN--DSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSN 266 (494)
Q Consensus 189 ~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~--~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~ 266 (494)
+++| .++.+|++|+..+.|.+||.... ..+.+..... .|.. ........+
T Consensus 96 ia~d------~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~-----------~g~~-----------~~~~~~P~~ 147 (329)
T 3fvz_A 96 LSID------TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ-----------PGSD-----------QNHFCQPTD 147 (329)
T ss_dssp EEEC------TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB-----------CCCS-----------TTCCSSEEE
T ss_pred EEEC------CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC-----------CCCC-----------ccccCCCcE
Confidence 7786 35569999999999999998665 3444421000 0000 011124567
Q ss_pred eEEeeecCCCCCcEEEEecC-CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCce
Q psy731 267 MVVDVTSANCDDAFLYIADS-GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFR 345 (494)
Q Consensus 267 i~VD~~~~~c~~~~~YI~D~-~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r 345 (494)
|++|. +++.+|++|. ..+.|.+||......+.+........+..+ .+. ...|||++|+ ..
T Consensus 148 ia~~~-----~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~-------~~~---~p~gia~d~~----~g 208 (329)
T 3fvz_A 148 VAVEP-----STGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPG-------QFS---VPHSLALVPH----LD 208 (329)
T ss_dssp EEECT-----TTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTT-------EES---CEEEEEEETT----TT
T ss_pred EEEeC-----CCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCc-------ccC---CCcEEEEECC----CC
Confidence 88874 2578999997 789999999665555555433221111111 222 2467999986 25
Q ss_pred eEEEeeCCCcceEeeech---hhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCc
Q psy731 346 VMYFHPLASTTEFAVTTK---VLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGE 422 (494)
Q Consensus 346 ~LYf~plss~~ly~V~T~---~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~ 422 (494)
.||+.-....++..+..+ .++.-. .......+..+. .+.|++++ .+|++|+++...+.|..|+..+|+
T Consensus 209 ~l~v~d~~~~~I~~~~~~~G~~~~~~~--~~~~~~~~~~~~------~~pg~~~~-~~g~~~v~~~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 209 QLCVADRENGRIQCFKTDTKEFVREIK--HASFGRNVFAIS------YIPGFLFA-VNGKPYFGDQEPVQGFVMNFSSGE 279 (329)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEC--CTTTTTCEEEEE------EETTEEEE-EECCCCTTCSCCCCEEEEETTTCC
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEEe--ccccCCCcceee------ecCCEEEE-eCCCEEeccCCCcEEEEEEcCCCe
Confidence 899987776666555432 111100 000000000000 01167777 688999999999999999977642
Q ss_pred cccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 423 EYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 423 ~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
-+..+......+.+|.++.++++|.|||..
T Consensus 280 -----~~~~~~~~~~~~~~p~~ia~~~dG~lyvad 309 (329)
T 3fvz_A 280 -----IIDVFKPVRKHFDMPHDIVASEDGTVYIGD 309 (329)
T ss_dssp -----EEEEECCSSSCCSSEEEEEECTTSEEEEEE
T ss_pred -----EEEEEcCCCCccCCeeEEEECCCCCEEEEE
Confidence 123443334678999999999999999985
No 10
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.44 E-value=7.4e-11 Score=122.50 Aligned_cols=239 Identities=16% Similarity=0.146 Sum_probs=161.7
Q ss_pred CceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE
Q psy731 125 NLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 125 ~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
.|.++..+.+|+.++||+.|.+.. +|.+||+.++++........ ... ++++. .+..+|
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~--------~I~~id~~~g~~~~~~~~~~--------~~~-ia~~~-----~g~~l~ 186 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDP--------RVRLISVDDNKVTTVHPGFK--------GGK-PAVTK-----DKQRVY 186 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTT--------EEEEEETTTTEEEEEEETCC--------BCB-CEECT-----TSSEEE
T ss_pred ccCCceEEEEeCCCCEEEEecCCC--------cEEEEECCCCEEEEeeccCC--------CCc-eeEec-----CCCcEE
Confidence 588999999999999999999765 89999999998876443211 122 66653 567999
Q ss_pred EeeCCCC-eEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEE
Q psy731 205 IADSGHN-HIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYI 283 (494)
Q Consensus 205 ItDs~~~-~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI 283 (494)
++|.... .|.++|...+...+.-.. . .........++++|. +++.+|+
T Consensus 187 ~~d~~~~~~I~~~d~~~~~~~~~~g~-~-------------------------~~~~~~~p~~iav~p-----~~g~lyv 235 (409)
T 3hrp_A 187 SIGWEGTHTVYVYMKASGWAPTRIGQ-L-------------------------GSTFSGKIGAVALDE-----TEEWLYF 235 (409)
T ss_dssp EEBSSTTCEEEEEEGGGTTCEEEEEE-C-------------------------CTTSCSCCCBCEECT-----TSSEEEE
T ss_pred EEecCCCceEEEEEcCCCceeEEeee-c-------------------------cchhcCCcEEEEEeC-----CCCeEEE
Confidence 9999765 899999887765333100 0 000223456788874 3688999
Q ss_pred ecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeeccee---eeeeccCCCCCceeEEEeeCCCcceEee
Q psy731 284 ADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIH---GMSLSPLTRDNFRVMYFHPLASTTEFAV 360 (494)
Q Consensus 284 ~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~---gIaLsp~~~~g~r~LYf~plss~~ly~V 360 (494)
+|. ...|.+||.+++..-.+....... ..+.. +|+++|+ +..||+.-....+++++
T Consensus 236 ~d~-~~~I~~~d~~~~~~~~~~~~~~~g----------------~~~~~P~~~ia~~p~----~g~lyv~d~~~~~I~~~ 294 (409)
T 3hrp_A 236 VDS-NKNFGRFNVKTQEVTLIKQLELSG----------------SLGTNPGPYLIYYFV----DSNFYMSDQNLSSVYKI 294 (409)
T ss_dssp ECT-TCEEEEEETTTCCEEEEEECCCCS----------------CCCCSSCCEEEEETT----TTEEEEEETTTTEEEEE
T ss_pred EEC-CCcEEEEECCCCCEEEEecccccC----------------CCCCCccccEEEeCC----CCEEEEEeCCCCEEEEE
Confidence 886 557999999887643332111100 01122 7999985 25999987777788877
Q ss_pred echhhcCCCcCccccccceEEeccc------------CCCCCCCeEEeeCCCCeEEEecc-CCCeEEEEe-CCCCccccc
Q psy731 361 TTKVLQNRSLDFSRSNFDFKVMGSR------------GTGSQSGASSLDEETGVIFYALL-VKSGVGCWN-TFRGEEYNE 426 (494)
Q Consensus 361 ~T~~L~~~~~~~~~~~~~v~~~G~~------------G~~~qs~g~~~D~~~G~ly~~~~-~~~aI~~w~-~~~~~~~~~ 426 (494)
... ... ....|.. .......|+++| .+|+||+++. ..+.|.+|+ +++ .
T Consensus 295 ~~~----g~~--------~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d-~dG~lyvad~~~~~~I~~~~~~~G--~--- 356 (409)
T 3hrp_A 295 TPD----GEC--------EWFCGSATQKTVQDGLREEALFAQPNGMTVD-EDGNFYIVDGFKGYCLRKLDILDG--Y--- 356 (409)
T ss_dssp CTT----CCE--------EEEEECTTCCSCBCEEGGGCBCSSEEEEEEC-TTCCEEEEETTTTCEEEEEETTTT--E---
T ss_pred ecC----CCE--------EEEEeCCCCCCcCCCcccccEeCCCeEEEEe-CCCCEEEEeCCCCCEEEEEECCCC--E---
Confidence 532 110 0111111 112346799999 7899999999 999999999 544 2
Q ss_pred cceeeeeec------------CCeEecccceEEcCCceEEEEe
Q psy731 427 KSMGLVAED------------NATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 427 ~~~~~v~~d------------~~~l~~pd~~~id~~g~Lwvls 457 (494)
+.+++-. ..+|.+|.++.+|++|.|||.-
T Consensus 357 --v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad 397 (409)
T 3hrp_A 357 --VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE 397 (409)
T ss_dssp --EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE
T ss_pred --EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE
Confidence 3344332 1358899999999999999985
No 11
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=1.4e-11 Score=129.07 Aligned_cols=250 Identities=10% Similarity=0.111 Sum_probs=159.0
Q ss_pred cCCCceEEeeEEEc--CCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCC
Q psy731 122 EARNLTSVVKVQSD--PCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCD 199 (494)
Q Consensus 122 ~~~~lvsV~~i~iD--~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~ 199 (494)
.|.+|.++..+.+| ..++|||.|.+ . +|.+||+.++++..... ..+....+++|. +
T Consensus 132 ~~~~~~~P~~lavdp~~~g~Lyv~d~~-~--------~I~~id~~~~~v~~~~~--------~~~~P~~ia~d~-----~ 189 (430)
T 3tc9_A 132 DCGGFGGAVWLSFDPKNHNHLYLVGEQ-H--------PTRLIDFEKEYVSTVYS--------GLSKVRTICWTH-----E 189 (430)
T ss_dssp GCBCCSCCCEEEEETTEEEEEEEEEBT-E--------EEEEEETTTTEEEEEEC--------CCSCEEEEEECT-----T
T ss_pred HccCCCCCCEEEECCCCCCeEEEEeCC-C--------cEEEEECCCCEEEEEec--------CCCCcceEEEeC-----C
Confidence 46679999999999 46999999998 3 89999999988765332 345677888874 4
Q ss_pred CcEEEEeeCCCC----eEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCC
Q psy731 200 NAFLYIADSGHN----HIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSAN 275 (494)
Q Consensus 200 ~~~vYItDs~~~----~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~ 275 (494)
+.++|++|...+ .+++++...+...+. + +........+++|.
T Consensus 190 G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~------------------------~------l~~~~~p~giavdp---- 235 (430)
T 3tc9_A 190 ADSMIITNDQNNNDRPNNYILTRESGFKVIT------------------------E------LTKGQNCNGAETHP---- 235 (430)
T ss_dssp SSEEEEEECCSCTTSEEEEEEEGGGTSCSEE------------------------E------EEECSSCCCEEECT----
T ss_pred CCEEEEEeCCCCcccceEEEEeCCCceeeee------------------------e------eccCCCceEEEEeC----
Confidence 568999998543 466666433222111 0 01123356777874
Q ss_pred CCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc
Q psy731 276 CDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST 355 (494)
Q Consensus 276 c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~ 355 (494)
+++++|++|...+.|.+||..++....+... .+ ..+-.|||++|+ +++||+.-..+.
T Consensus 236 -~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~-------------~~-----~~~P~gia~~pd----G~~lyv~d~~~~ 292 (430)
T 3tc9_A 236 -INGELYFNSWNAGQVFRYDFTTQETTPLFTI-------------QD-----SGWEFHIQFHPS----GNYAYIVVVNQH 292 (430)
T ss_dssp -TTCCEEEEETTTTEEEEEETTTTEEEEEEEC-------------SS-----SSCCEEEEECTT----SSEEEEEETTTT
T ss_pred -CCCEEEEEECCCCEEEEEECCCCcEEEEEEc-------------CC-----CCcceeEEEcCC----CCEEEEEECCCC
Confidence 2578999999999999999987654322110 00 012356999987 368999887777
Q ss_pred ceEeeechh----hcCCCc-CccccccceE-EecccCCCCCCC-eEEeeC-------CCCeEEEeccCCCeEEEEeCCCC
Q psy731 356 TEFAVTTKV----LQNRSL-DFSRSNFDFK-VMGSRGTGSQSG-ASSLDE-------ETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 356 ~ly~V~T~~----L~~~~~-~~~~~~~~v~-~~G~~G~~~qs~-g~~~D~-------~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
+++++...- |..... ....-...+. -.+..+...... |+++|+ ..|+||+++...++|.++++++
T Consensus 293 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G- 371 (430)
T 3tc9_A 293 YILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQG- 371 (430)
T ss_dssp EEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTS-
T ss_pred EEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCCC-
Confidence 888876432 111000 0000000000 000000112233 788841 5799999999999999999887
Q ss_pred ccccccceeeeeec---------------CCeEecccceEEcC-CceEEEEe
Q psy731 422 EEYNEKSMGLVAED---------------NATLIYPSDIRVDR-TGVLWVLS 457 (494)
Q Consensus 422 ~~~~~~~~~~v~~d---------------~~~l~~pd~~~id~-~g~Lwvls 457 (494)
. +.+++-. ..+|.+|.++.+|+ +|.|||.-
T Consensus 372 -~-----v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD 417 (430)
T 3tc9_A 372 -R-----VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGD 417 (430)
T ss_dssp -E-----EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEE
T ss_pred -c-----EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEE
Confidence 3 3344321 13588999999998 69999984
No 12
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.40 E-value=2.5e-10 Score=108.56 Aligned_cols=230 Identities=10% Similarity=0.095 Sum_probs=155.8
Q ss_pred CceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE
Q psy731 125 NLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 125 ~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
.+..+.++.+|.+++||+.+.+.. .|.+||+. +++ +.+.++. .......+++| .++.+|
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~--------~v~~~d~~-~~~-~~~~~~~-----~~~~~~~i~~~------~~g~l~ 71 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKAN--------MISCINLD-GKI-TEYPLPT-----PDAKVMCLTIS------SDGEVW 71 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTT--------EEEEECTT-CCE-EEEECSS-----TTCCEEEEEEC------TTSCEE
T ss_pred cCCCccceEECCCCCEEEEecCCC--------cEEEEcCC-CCe-EEecCCc-----ccCceeeEEEC------CCCCEE
Confidence 356788999999999999988655 79999998 654 4566654 34566777776 467799
Q ss_pred EeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 205 IADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 205 ItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
+++...++|.+||.+ ++..++.. + ........|++|. ++.+|++
T Consensus 72 v~~~~~~~i~~~~~~-g~~~~~~~------------------------~-----~~~~~~~~i~~~~------~g~l~v~ 115 (299)
T 2z2n_A 72 FTENAANKIGRITKK-GIIKEYTL------------------------P-----NPDSAPYGITEGP------NGDIWFT 115 (299)
T ss_dssp EEETTTTEEEEECTT-SCEEEEEC------------------------S-----STTCCEEEEEECT------TSCEEEE
T ss_pred EeCCCCCeEEEECCC-CcEEEEeC------------------------C-----CcCCCceeeEECC------CCCEEEE
Confidence 999999999999986 55444421 0 1122356677763 3568999
Q ss_pred cCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechh
Q psy731 285 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKV 364 (494)
Q Consensus 285 D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~ 364 (494)
+....+|.++|. +++..++.... + ...+.+|+++++ ..||+....+..++.+..
T Consensus 116 ~~~~~~i~~~d~-~g~~~~~~~~~----~--------------~~~~~~i~~~~~-----g~l~v~~~~~~~i~~~~~-- 169 (299)
T 2z2n_A 116 EMNGNRIGRITD-DGKIREYELPN----K--------------GSYPSFITLGSD-----NALWFTENQNNAIGRITE-- 169 (299)
T ss_dssp ETTTTEEEEECT-TCCEEEEECSS----T--------------TCCEEEEEECTT-----SCEEEEETTTTEEEEECT--
T ss_pred ecCCceEEEECC-CCCEEEecCCC----C--------------CCCCceEEEcCC-----CCEEEEeCCCCEEEEEcC--
Confidence 988889999998 55544443211 0 023567999875 278987765567777754
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccc
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSD 444 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~ 444 (494)
+.... .+. ...+ .....++++| ..|.||++....+.|.+||+.+ .+ ..+.. +.....|.+
T Consensus 170 --~g~~~------~~~--~~~~-~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~g--~~-----~~~~~-~~~~~~~~~ 229 (299)
T 2z2n_A 170 --SGDIT------EFK--IPTP-ASGPVGITKG-NDDALWFVEIIGNKIGRITTSG--EI-----TEFKI-PTPNARPHA 229 (299)
T ss_dssp --TCCEE------EEE--CSST-TCCEEEEEEC-TTSSEEEEETTTTEEEEECTTC--CE-----EEEEC-SSTTCCEEE
T ss_pred --CCcEE------Eee--CCCC-CCcceeEEEC-CCCCEEEEccCCceEEEECCCC--cE-----EEEEC-CCCCCCcee
Confidence 11110 010 1111 2335689999 7899999999999999999944 32 22211 223467899
Q ss_pred eEEcCCceEEEEe
Q psy731 445 IRVDRTGVLWVLS 457 (494)
Q Consensus 445 ~~id~~g~Lwvls 457 (494)
+.+|++|.|||..
T Consensus 230 i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 230 ITAGAGIDLWFTE 242 (299)
T ss_dssp EEECSTTCEEEEE
T ss_pred EEECCCCCEEEec
Confidence 9999999999996
No 13
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.39 E-value=6.2e-11 Score=112.08 Aligned_cols=226 Identities=14% Similarity=0.140 Sum_probs=147.1
Q ss_pred EEeeEEEcCCCeEEE-EeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 128 SVVKVQSDPCDRLWA-LDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 128 sV~~i~iD~~~~Lwv-lD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
.+.++.+|++++||| .|.+.. .|.+||..+..... + +. ........+++| .++.+||+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~--------~i~~~~~~~~~~~~-~--~~----~~~~~p~~i~~~------~~g~l~v~ 83 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYG--------RVVKLATGSTGTTV-L--PF----NGLYQPQGLAVD------GAGTVYVT 83 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSC--------EEEEECC-----EE-C--CC----CSCCSCCCEEEC------TTCCEEEE
T ss_pred CccceEECCCCCEEEEccCCCC--------cEEEecCCCcccce-E--ee----CCcCCcceeEEC------CCCCEEEE
Confidence 889999999999999 888766 79999987765432 2 11 122455677776 34569999
Q ss_pred eCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 207 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
|. .+.|.+||...+..+.+.. ........|++|. ++.+|++|.
T Consensus 84 ~~-~~~i~~~d~~~~~~~~~~~------------------------------~~~~~p~~i~~~~------~g~l~v~~~ 126 (270)
T 1rwi_B 84 DF-NNRVVTLAAGSNNQTVLPF------------------------------DGLNYPEGLAVDT------QGAVYVADR 126 (270)
T ss_dssp ET-TTEEEEECTTCSCCEECCC------------------------------CSCSSEEEEEECT------TCCEEEEEG
T ss_pred cC-CCEEEEEeCCCceEeeeec------------------------------CCcCCCcceEECC------CCCEEEEEC
Confidence 99 7899999988776654411 0112356677773 345999998
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhc
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQ 366 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~ 366 (494)
....|.+++..+.......... .....+|+++++ | .||+....+..++.+..+--
T Consensus 127 ~~~~i~~~~~~~~~~~~~~~~~-------------------~~~p~~i~~~~~---g--~l~v~~~~~~~i~~~~~~~~- 181 (270)
T 1rwi_B 127 GNNRVVKLAAGSKTQTVLPFTG-------------------LNDPDGVAVDNS---G--NVYVTDTDNNRVVKLEAESN- 181 (270)
T ss_dssp GGTEEEEECTTCCSCEECCCCS-------------------CCSCCCEEECTT---C--CEEEEEGGGTEEEEECTTTC-
T ss_pred CCCEEEEEECCCceeEeecccc-------------------CCCceeEEEeCC---C--CEEEEECCCCEEEEEecCCC-
Confidence 8889999976554432211110 113566999875 3 49987765556776653210
Q ss_pred CCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceE
Q psy731 367 NRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIR 446 (494)
Q Consensus 367 ~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~ 446 (494)
. .......+ .....++++| .+|+||+++...+.|.+|++++ .. ... .. ...+..|.++.
T Consensus 182 --~---------~~~~~~~~-~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~~--~~----~~~-~~-~~~~~~p~~i~ 240 (270)
T 1rwi_B 182 --N---------QVVLPFTD-ITAPWGIAVD-EAGTVYVTEHNTNQVVKLLAGS--TT----STV-LP-FTGLNTPLAVA 240 (270)
T ss_dssp --C---------EEECCCSS-CCSEEEEEEC-TTCCEEEEETTTSCEEEECTTC--SC----CEE-CC-CCSCSCEEEEE
T ss_pred --c---------eEeecccC-CCCceEEEEC-CCCCEEEEECCCCcEEEEcCCC--Cc----cee-ec-cCCCCCceeEE
Confidence 0 01111111 1345789999 7899999999999999999987 22 111 12 13457899999
Q ss_pred EcCCceEEEEe
Q psy731 447 VDRTGVLWVLS 457 (494)
Q Consensus 447 id~~g~Lwvls 457 (494)
++++|.|||..
T Consensus 241 ~~~~g~l~v~~ 251 (270)
T 1rwi_B 241 VDSDRTVYVAD 251 (270)
T ss_dssp ECTTCCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99999999996
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.37 E-value=4.6e-10 Score=106.69 Aligned_cols=269 Identities=11% Similarity=0.124 Sum_probs=176.6
Q ss_pred CCeeeeeee-eCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCeE
Q psy731 62 NCLPVSLDK-WHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDRL 140 (494)
Q Consensus 62 ~~~p~gv~v-~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~L 140 (494)
..-|.++.+ .+|+++++-.. ...|..+..+ + .+..|+.. .....+.++.+|++++|
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~-----~~~v~~~d~~-~----------~~~~~~~~-------~~~~~~~~i~~~~~g~l 70 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHK-----ANMISCINLD-G----------KITEYPLP-------TPDAKVMCLTISSDGEV 70 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-C----------CEEEEECS-------STTCCEEEEEECTTSCE
T ss_pred CCCccceEECCCCCEEEEecC-----CCcEEEEcCC-C----------CeEEecCC-------cccCceeeEEECCCCCE
Confidence 456888888 48899998642 1245555432 1 22222210 11256788999999999
Q ss_pred EEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccC
Q psy731 141 WALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRT 220 (494)
Q Consensus 141 wvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~ 220 (494)
|+.+.+.. .|.+||.. +++ +.+.+|. .......+.+| .++.+|+++...++|.+||. +
T Consensus 71 ~v~~~~~~--------~i~~~~~~-g~~-~~~~~~~-----~~~~~~~i~~~------~~g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 71 WFTENAAN--------KIGRITKK-GII-KEYTLPN-----PDSAPYGITEG------PNGDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp EEEETTTT--------EEEEECTT-SCE-EEEECSS-----TTCCEEEEEEC------TTSCEEEEETTTTEEEEECT-T
T ss_pred EEeCCCCC--------eEEEECCC-CcE-EEEeCCC-----cCCCceeeEEC------CCCCEEEEecCCceEEEECC-C
Confidence 99998765 79999986 443 5566664 34566777776 35689999999999999998 7
Q ss_pred CceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCc
Q psy731 221 NDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTND 300 (494)
Q Consensus 221 ~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~ 300 (494)
++..++.. .........+++|. ++.+|+++....+|.+||. +++
T Consensus 129 g~~~~~~~-----------------------------~~~~~~~~~i~~~~------~g~l~v~~~~~~~i~~~~~-~g~ 172 (299)
T 2z2n_A 129 GKIREYEL-----------------------------PNKGSYPSFITLGS------DNALWFTENQNNAIGRITE-SGD 172 (299)
T ss_dssp CCEEEEEC-----------------------------SSTTCCEEEEEECT------TSCEEEEETTTTEEEEECT-TCC
T ss_pred CCEEEecC-----------------------------CCCCCCCceEEEcC------CCCEEEEeCCCCEEEEEcC-CCc
Confidence 76655521 01122356677763 3578999988889999998 665
Q ss_pred EEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceE
Q psy731 301 SHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFK 380 (494)
Q Consensus 301 swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~ 380 (494)
.-++... .. .....+|+++++ | .||+....+..++.+.. +.. ++
T Consensus 173 ~~~~~~~----~~--------------~~~~~~i~~~~~---g--~l~v~~~~~~~i~~~~~----~g~---------~~ 216 (299)
T 2z2n_A 173 ITEFKIP----TP--------------ASGPVGITKGND---D--ALWFVEIIGNKIGRITT----SGE---------IT 216 (299)
T ss_dssp EEEEECS----ST--------------TCCEEEEEECTT---S--SEEEEETTTTEEEEECT----TCC---------EE
T ss_pred EEEeeCC----CC--------------CCcceeEEECCC---C--CEEEEccCCceEEEECC----CCc---------EE
Confidence 4433111 00 123567999875 2 58988766667777753 111 11
Q ss_pred EecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 381 VMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 381 ~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
.+...+......++++| .+|+||++....+.|.+||+++ .+ ..+.. +.....|.++.+ .+|.||+.+
T Consensus 217 ~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d~~g--~~-----~~~~~-~~~~~~~~~i~~-~~g~l~v~~ 283 (299)
T 2z2n_A 217 EFKIPTPNARPHAITAG-AGIDLWFTEWGANKIGRLTSNN--II-----EEYPI-QIKSAEPHGICF-DGETIWFAM 283 (299)
T ss_dssp EEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEEETTT--EE-----EEEEC-SSSSCCEEEEEE-CSSCEEEEE
T ss_pred EEECCCCCCCceeEEEC-CCCCEEEeccCCceEEEECCCC--ce-----EEEeC-CCCCCccceEEe-cCCCEEEEe
Confidence 11111112345789999 7899999999999999999965 33 22211 123457899999 899999986
No 15
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.30 E-value=2.2e-09 Score=104.94 Aligned_cols=257 Identities=12% Similarity=0.094 Sum_probs=161.4
Q ss_pred ceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEE
Q psy731 126 LTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYI 205 (494)
Q Consensus 126 lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYI 205 (494)
...+.++..|++++||+.|.... .|.+||+.++++.+.... .......+++| .++.+|+
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~--------~i~~~d~~~~~~~~~~~~-------~~~~~~~i~~~------~dg~l~v 102 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEG--------NIFKINPETKEIKRPFVS-------HKANPAAIKIH------KDGRLFV 102 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTC--------EEEEECTTTCCEEEEEEC-------SSSSEEEEEEC------TTSCEEE
T ss_pred CccccCcEECCCCCEEEEECCCC--------EEEEEeCCCCcEEEEeeC-------CCCCcceEEEC------CCCcEEE
Confidence 34567888999999999998765 899999999987653321 22345666665 3567999
Q ss_pred eeCCC----CeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEE
Q psy731 206 ADSGH----NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFL 281 (494)
Q Consensus 206 tDs~~----~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~ 281 (494)
++... .+|.+||.+++...++-.. .......+++++|. ++.+
T Consensus 103 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~----------------------------~~~~~~~~~i~~d~------~g~l 148 (333)
T 2dg1_A 103 CYLGDFKSTGGIFAATENGDNLQDIIED----------------------------LSTAYCIDDMVFDS------KGGF 148 (333)
T ss_dssp EECTTSSSCCEEEEECTTSCSCEEEECS----------------------------SSSCCCEEEEEECT------TSCE
T ss_pred EeCCCCCCCceEEEEeCCCCEEEEEEcc----------------------------CccCCcccceEECC------CCCE
Confidence 99877 7999999998887654110 01123456777773 3457
Q ss_pred EEecCC------CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc
Q psy731 282 YIADSG------HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST 355 (494)
Q Consensus 282 YI~D~~------~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~ 355 (494)
|+++.. ..+|.++|.++++..++... .....+|+++|+ ++.||+......
T Consensus 149 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------------~~~~~~i~~~~d----g~~l~v~~~~~~ 204 (333)
T 2dg1_A 149 YFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--------------------ISVANGIALSTD----EKVLWVTETTAN 204 (333)
T ss_dssp EEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--------------------ESSEEEEEECTT----SSEEEEEEGGGT
T ss_pred EEEeccccccCCCceEEEEeCCCCEEEEeecC--------------------CCcccceEECCC----CCEEEEEeCCCC
Confidence 888864 35677787766554333210 123567999987 368998765444
Q ss_pred ceEeeechhhcCCCcCccccccc-eEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeee
Q psy731 356 TEFAVTTKVLQNRSLDFSRSNFD-FKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAE 434 (494)
Q Consensus 356 ~ly~V~T~~L~~~~~~~~~~~~~-v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~ 434 (494)
.++.++.+. +... ....... +... .+ .....++++| .+|+||++....+.|.+||+++ . .+..+..
T Consensus 205 ~i~~~d~~~--~g~~-~~~~~~~~~~~~--~~-~~~~~~i~~d-~~G~l~v~~~~~~~v~~~d~~g--~----~~~~~~~ 271 (333)
T 2dg1_A 205 RLHRIALED--DGVT-IQPFGATIPYYF--TG-HEGPDSCCID-SDDNLYVAMYGQGRVLVFNKRG--Y----PIGQILI 271 (333)
T ss_dssp EEEEEEECT--TSSS-EEEEEEEEEEEC--CS-SSEEEEEEEB-TTCCEEEEEETTTEEEEECTTS--C----EEEEEEC
T ss_pred eEEEEEecC--CCcC-cccccceEEEec--CC-CCCCCceEEC-CCCCEEEEEcCCCEEEEECCCC--C----EEEEEEc
Confidence 666654321 1110 0000000 0001 11 1235789999 7899999998889999999976 2 1233322
Q ss_pred c---CCeEecccceEEcCCc-eEEEEecCchhhhcCCCCCCcccEEEEEEech
Q psy731 435 D---NATLIYPSDIRVDRTG-VLWVLSNKLPVFLYSKLKPEDINVRIFKSTVR 483 (494)
Q Consensus 435 d---~~~l~~pd~~~id~~g-~Lwvlsnrl~~~~~~~~~~~~~nfrI~r~~~~ 483 (494)
. +..+.+|.++.++++| .|||.+++=. ....-.||++++.
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~---------~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTNQLIICSNDIE---------MGGGSMLYTVNGF 315 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEECGG---------GTCCEEEEEEECS
T ss_pred CCCccccccCcceEEECCCCCEEEEEeCccC---------CCCCceEEEEecc
Confidence 1 1123478999998875 8999987643 1235677777654
No 16
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.28 E-value=1.9e-09 Score=111.00 Aligned_cols=225 Identities=17% Similarity=0.203 Sum_probs=155.4
Q ss_pred CceEEeeEEEc-CCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 125 NLTSVVKVQSD-PCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 125 ~lvsV~~i~iD-~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
.+..+.++..| ..++||+.|.... +|.++++.+..+...+. . .......++||. .++.+
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~--------~I~r~~~~g~~~~~~~~--~-----~~~~p~glavd~-----~~g~l 173 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLD--------RILRANLNGSNVEEVVS--T-----GLESPGGLAVDW-----VHDKL 173 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTT--------EEEEEETTSCCEEEEEC--S-----SCSCCCCEEEET-----TTTEE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCC--------cEEEEecCCCCcEEEEe--C-----CCCCccEEEEEe-----CCCeE
Confidence 45668899999 5789999999876 89999998876543221 1 233457899985 57899
Q ss_pred EEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEE
Q psy731 204 YIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYI 283 (494)
Q Consensus 204 YItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI 283 (494)
|++|++.+.|.|+++.......+-. ......++|+||. .++++|+
T Consensus 174 Y~~d~~~~~I~~~~~dg~~~~~l~~------------------------------~~l~~P~giavdp-----~~g~ly~ 218 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAHRKVLLW------------------------------QSLEKPRAIALHP-----MEGTIYW 218 (386)
T ss_dssp EEEETTTTEEEECBTTSCSCEEEEC------------------------------SSCSCEEEEEEET-----TTTEEEE
T ss_pred EEEcCCCCeEEEEeCCCCceEEeec------------------------------CCCCCCcEEEEEc-----CCCeEEE
Confidence 9999999999999987544333211 1123468899984 3589999
Q ss_pred ecCCC-CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeec
Q psy731 284 ADSGH-NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTT 362 (494)
Q Consensus 284 ~D~~~-~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T 362 (494)
+|.+. +.|.++++.......+.... +.+ -+|||++|+ .+.|||.-....+++++..
T Consensus 219 td~~~~~~I~r~~~dG~~~~~~~~~~----------------~~~---PnGlavd~~----~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 219 TDWGNTPRIEASSMDGSGRRIIADTH----------------LFW---PNGLTIDYA----GRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSS----------------CSC---EEEEEEEGG----GTEEEEEETTTTEEEEECT
T ss_pred eccCCCCEEEEEeCCCCCcEEEEECC----------------CCC---eeeEEEeCC----CCEEEEEECCCCEEEEEeC
Confidence 99887 88889988765433332211 112 367999986 3699998766667877753
Q ss_pred hhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecc
Q psy731 363 KVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYP 442 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~p 442 (494)
. .+ ..+.+...+ .....|++++ .|.||+++...++|.++|..+| +...+|.. .+..|
T Consensus 276 d----G~--------~~~~~~~~~-~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G-----~~~~~i~~---~~~~p 332 (386)
T 3v65_B 276 D----GS--------HRKAVISQG-LPHPFAITVF--EDSLYWTDWHTKSINSANKFTG-----KNQEIIRN---KLHFP 332 (386)
T ss_dssp T----SC--------SCEEEECSS-CSSEEEEEEE--TTEEEEEETTTTEEEEEETTTC-----CSCEEEEC---SCSCC
T ss_pred C----CC--------eeEEEEECC-CCCceEEEEE--CCEEEEeeCCCCeEEEEECCCC-----cceEEEcc---CCCCC
Confidence 2 11 111122211 2457899998 6799999999999999995443 23455553 36789
Q ss_pred cceEEcCC
Q psy731 443 SDIRVDRT 450 (494)
Q Consensus 443 d~~~id~~ 450 (494)
.++.+.+.
T Consensus 333 ~gi~v~~~ 340 (386)
T 3v65_B 333 MDIHTLHP 340 (386)
T ss_dssp CCEEEESG
T ss_pred ceEEEEch
Confidence 99998654
No 17
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.28 E-value=6.8e-09 Score=103.44 Aligned_cols=244 Identities=9% Similarity=0.027 Sum_probs=161.1
Q ss_pred CeeeeeeeeCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCeEEE
Q psy731 63 CLPVSLDKWHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDRLWA 142 (494)
Q Consensus 63 ~~p~gv~v~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~Lwv 142 (494)
..|.++.+.++++|++... ..+|..+..+.. -.+.-+|. ...+..+.++.+++|||
T Consensus 44 ~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~---------~~~~~i~~----------~~~p~~i~~~~~g~lyv 99 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTF---------KEVGRITG----------FTSPRYIHFLSDEKAYV 99 (328)
T ss_dssp SCEEEEEEETTEEEEEEGG-----GTEEEEEETTTC---------CEEEEEEC----------CSSEEEEEEEETTEEEE
T ss_pred ccceEEEEECCEEEEEEcC-----CCEEEEEECccc---------EEEEEcCC----------CCCCcEEEEeCCCeEEE
Confidence 5678888899999999853 236777775432 12233332 24466777766789999
Q ss_pred EeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC-CCeEEEEEccCC
Q psy731 143 LDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-HNHIVVYNYRTN 221 (494)
Q Consensus 143 lD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-~~~iIVyd~~~~ 221 (494)
.+.... .|.++|++|+++.+++..+. ..........++++ ++.+|+++.+ .+.|.|+|.+++
T Consensus 100 ~~~~~~--------~v~~iD~~t~~~~~~i~~g~--~~~~~~~p~~i~~~-------~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 100 TQIWDY--------RIFIINPKTYEITGYIECPD--MDMESGSTEQMVQY-------GKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp EEBSCS--------EEEEEETTTTEEEEEEECTT--CCTTTCBCCCEEEE-------TTEEEEEECTTCCEEEEEETTTT
T ss_pred EECCCC--------eEEEEECCCCeEEEEEEcCC--ccccCCCcceEEEE-------CCEEEEEcCCCCCEEEEEECCCC
Confidence 996544 89999999999999888765 11122345667773 6789999985 889999999998
Q ss_pred ceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCC----------CeE
Q psy731 222 DSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGH----------NHI 291 (494)
Q Consensus 222 ~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~----------~gl 291 (494)
+..+.- ..+.....+++|. ++.+|+++.+. ..|
T Consensus 163 ~~~~~i-------------------------------~~g~~p~~i~~~~------dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 163 KVVDEL-------------------------------TIGIQPTSLVMDK------YNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp EEEEEE-------------------------------ECSSCBCCCEECT------TSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred eEEEEE-------------------------------EcCCCccceEEcC------CCCEEEEECCCccCCccccCCceE
Confidence 754320 0112245566663 34578888765 689
Q ss_pred EEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcC
Q psy731 292 VVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLD 371 (494)
Q Consensus 292 iVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~ 371 (494)
.++|.++++.-+...- | .| .+..+|+++|+ ++.||+..- .+|.+.++-.+ +.
T Consensus 206 ~~id~~t~~v~~~~~~-----~-------~g------~~p~~la~~~d----~~~lyv~~~---~v~~~d~~t~~---~~ 257 (328)
T 3dsm_A 206 YRIDAETFTVEKQFKF-----K-------LG------DWPSEVQLNGT----RDTLYWINN---DIWRMPVEADR---VP 257 (328)
T ss_dssp EEEETTTTEEEEEEEC-----C-------TT------CCCEEEEECTT----SCEEEEESS---SEEEEETTCSS---CC
T ss_pred EEEECCCCeEEEEEec-----C-------CC------CCceeEEEecC----CCEEEEEcc---EEEEEECCCCc---ee
Confidence 9999988764321110 0 00 13567999987 378998542 67776653221 10
Q ss_pred ccccccceEEecccCCCCCCCeEEeeCCCCeEEEec----cCCCeEEEEeCCC
Q psy731 372 FSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYAL----LVKSGVGCWNTFR 420 (494)
Q Consensus 372 ~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~----~~~~aI~~w~~~~ 420 (494)
. ..+-..+ .....|+++||.+|.||.++ ...+.|.+||+++
T Consensus 258 ~----~~~~~~~----~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 258 V----RPFLEFR----DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp S----SCSBCCC----SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred e----eeeecCC----CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 0 0110011 13467999997799999999 7889999999996
No 18
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.28 E-value=4.7e-10 Score=110.89 Aligned_cols=243 Identities=11% Similarity=0.062 Sum_probs=152.4
Q ss_pred CceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCcc-------------ccccCCccceEE
Q psy731 125 NLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTD-------------YTEESKFSNMVV 191 (494)
Q Consensus 125 ~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~-------------~~~~S~l~d~vV 191 (494)
.|....++.+|..+++|.+|.... +|++||..++++. .+..+.... .........+++
T Consensus 17 ~~~~p~~i~~d~~g~~l~v~~~~~--------~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~ 87 (322)
T 2fp8_A 17 PSYAPNSFTFDSTNKGFYTSVQDG--------RVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISY 87 (322)
T ss_dssp SSSCCCCEECCTTCSSEEEECTTS--------EEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE
T ss_pred ccCCceEEEEcCCCCEEEEEcCCC--------eEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEE
Confidence 366778888998898555677655 8999999887654 344332100 001123456777
Q ss_pred EeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEee
Q psy731 192 DVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDV 271 (494)
Q Consensus 192 D~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~ 271 (494)
|. .++.+||+|.. .+|.++|.+++....+....- -.+...++++++|.
T Consensus 88 ~~-----~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~~~--------------------------~~~~~~p~~i~~d~ 135 (322)
T 2fp8_A 88 NL-----QNNQLYIVDCY-YHLSVVGSEGGHATQLATSVD--------------------------GVPFKWLYAVTVDQ 135 (322)
T ss_dssp ET-----TTTEEEEEETT-TEEEEECTTCEECEEEESEET--------------------------TEECSCEEEEEECT
T ss_pred cC-----CCCcEEEEECC-CCEEEEeCCCCEEEEecccCC--------------------------CCcccccceEEEec
Confidence 62 36789999987 459999988776544421000 01123467888873
Q ss_pred ecCCCCCcEEEEecCCC-----------------CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeee
Q psy731 272 TSANCDDAFLYIADSGH-----------------NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGM 334 (494)
Q Consensus 272 ~~~~c~~~~~YI~D~~~-----------------~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gI 334 (494)
. ++.+|++|... .+|++||.++++.-.+... + ...+||
T Consensus 136 ~-----~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-----------------~---~~p~gi 190 (322)
T 2fp8_A 136 R-----TGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-----------------L---HVPGGA 190 (322)
T ss_dssp T-----TCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-----------------E---SCCCEE
T ss_pred C-----CCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-----------------C---ccCcce
Confidence 1 35799999752 4588888776653222111 1 235679
Q ss_pred eeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccC-----
Q psy731 335 SLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLV----- 409 (494)
Q Consensus 335 aLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~----- 409 (494)
+++|+ ++.||+.-....+++++..+- ... ...+.+.+. .+ .+|+++| .+|+||++...
T Consensus 191 a~~~d----g~~lyv~d~~~~~I~~~~~~~---~~~------~~~~~~~~~--~g-P~gi~~d-~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 191 EVSAD----SSFVLVAEFLSHQIVKYWLEG---PKK------GTAEVLVKI--PN-PGNIKRN-ADGHFWVSSSEELDGN 253 (322)
T ss_dssp EECTT----SSEEEEEEGGGTEEEEEESSS---TTT------TCEEEEEEC--SS-EEEEEEC-TTSCEEEEEEEETTSS
T ss_pred EECCC----CCEEEEEeCCCCeEEEEECCC---CcC------CccceEEeC--CC-CCCeEEC-CCCCEEEEecCccccc
Confidence 99987 368999876666777775431 111 122333332 13 6899999 89999999987
Q ss_pred -----CCeEEEEeCCCCccccccceeeeeecCC-eEecccceEEcCCceEEEEe
Q psy731 410 -----KSGVGCWNTFRGEEYNEKSMGLVAEDNA-TLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 410 -----~~aI~~w~~~~~~~~~~~~~~~v~~d~~-~l~~pd~~~id~~g~Lwvls 457 (494)
.+.|.++|+++ .. +..+...+. .+.+|+++.. .+|+|||.+
T Consensus 254 ~~~~~~~~v~~~d~~G--~~----~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~ 300 (322)
T 2fp8_A 254 MHGRVDPKGIKFDEFG--NI----LEVIPLPPPFAGEHFEQIQE-HDGLLYIGT 300 (322)
T ss_dssp TTSCEEEEEEEECTTS--CE----EEEEECCTTTTTSCCCEEEE-ETTEEEEEC
T ss_pred ccCCCccEEEEECCCC--CE----EEEEECCCCCccccceEEEE-eCCEEEEee
Confidence 57899999987 32 233332211 2678998887 478999995
No 19
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.27 E-value=2.5e-09 Score=103.38 Aligned_cols=231 Identities=10% Similarity=0.078 Sum_probs=147.7
Q ss_pred CceEEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 125 NLTSVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 125 ~lvsV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
++....++..|++++ ||+.|.... .|.+||+.++ .+.+..+. .....+++| .++.+
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~--------~i~~~~~~~~--~~~~~~~~-------~~~~~l~~~------~dg~l 82 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQN--------RTWAWSDDGQ--LSPEMHPS-------HHQNGHCLN------KQGHL 82 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGT--------EEEEEETTSC--EEEEESSC-------SSEEEEEEC------TTCCE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCC--------EEEEEECCCC--eEEEECCC-------CCcceeeEC------CCCcE
Confidence 455677889999886 999998776 8999999988 56665443 334566665 35668
Q ss_pred EEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEE
Q psy731 204 YIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYI 283 (494)
Q Consensus 204 YItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI 283 (494)
|+++.+.++|.+||.++|+..++..... ......++++++|. ++.+|+
T Consensus 83 ~v~~~~~~~i~~~d~~~g~~~~~~~~~~--------------------------~~~~~~~~~i~~d~------~G~l~v 130 (296)
T 3e5z_A 83 IACSHGLRRLERQREPGGEWESIADSFE--------------------------GKKLNSPNDVCLAP------DGSLWF 130 (296)
T ss_dssp EEEETTTTEEEEECSTTCCEEEEECEET--------------------------TEECCCCCCEEECT------TSCEEE
T ss_pred EEEecCCCeEEEEcCCCCcEEEEeeccC--------------------------CCCCCCCCCEEECC------CCCEEE
Confidence 9999999999999999998766621000 01122356778873 356899
Q ss_pred ecCC-----------------CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCcee
Q psy731 284 ADSG-----------------HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRV 346 (494)
Q Consensus 284 ~D~~-----------------~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~ 346 (494)
+|.. ..+|..+|.. ++..++... .....||+++|++ +.
T Consensus 131 td~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--------------------~~~~~gi~~s~dg----~~ 185 (296)
T 3e5z_A 131 SDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--------------------RVKPNGLAFLPSG----NL 185 (296)
T ss_dssp EECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--------------------CSSEEEEEECTTS----CE
T ss_pred ECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--------------------CCCCccEEECCCC----CE
Confidence 8752 2366666655 333222111 1124679999873 56
Q ss_pred EEEeeCCCcceEeeechhhcCCCc-CccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCcccc
Q psy731 347 MYFHPLASTTEFAVTTKVLQNRSL-DFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYN 425 (494)
Q Consensus 347 LYf~plss~~ly~V~T~~L~~~~~-~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~ 425 (494)
| +......+++..+.+ .+..+ .. .+.+ +. ......|+++| .+|+||++. .+.|.+||+++ .
T Consensus 186 l-v~~~~~~~i~~~~~~--~~g~~~~~------~~~~-~~-~~~~p~~i~~d-~~G~l~v~~--~~~v~~~~~~g--~-- 247 (296)
T 3e5z_A 186 L-VSDTGDNATHRYCLN--ARGETEYQ------GVHF-TV-EPGKTDGLRVD-AGGLIWASA--GDGVHVLTPDG--D-- 247 (296)
T ss_dssp E-EEETTTTEEEEEEEC--SSSCEEEE------EEEE-CC-SSSCCCSEEEB-TTSCEEEEE--TTEEEEECTTS--C--
T ss_pred E-EEeCCCCeEEEEEEC--CCCcCcCC------CeEe-eC-CCCCCCeEEEC-CCCCEEEEc--CCeEEEECCCC--C--
Confidence 6 666555567666543 12221 10 1112 11 12346799999 899999999 78999999986 2
Q ss_pred ccceeeeeecCCeEecccceEEc-CCc-eEEEEecC
Q psy731 426 EKSMGLVAEDNATLIYPSDIRVD-RTG-VLWVLSNK 459 (494)
Q Consensus 426 ~~~~~~v~~d~~~l~~pd~~~id-~~g-~Lwvlsnr 459 (494)
.+..+... .. |..+.++ ++| .|||.++.
T Consensus 248 --~~~~~~~~-~~---~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 248 --ELGRVLTP-QT---TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp --EEEEEECS-SC---CCEEEEESTTSCEEEEEETT
T ss_pred --EEEEEECC-CC---ceeEEEECCCCCEEEEEcCC
Confidence 22333322 22 7888884 454 79999854
No 20
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=7e-10 Score=106.93 Aligned_cols=243 Identities=10% Similarity=0.063 Sum_probs=150.5
Q ss_pred CceEEeeEEEcCCCeEEEE-------eCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCC
Q psy731 125 NLTSVVKVQSDPCDRLWAL-------DSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSAN 197 (494)
Q Consensus 125 ~lvsV~~i~iD~~~~Lwvl-------D~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~ 197 (494)
++..+.++..|.+++||+. |.... .|.+||++++++.. +..|. ..........+.+|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~--------~i~~~d~~~g~~~~-~~~~~--~~~~~~~~~~i~~~----- 79 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAG--------EILRIDLKTGKKTV-ICKPE--VNGYGGIPAGCQCD----- 79 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECC--------EEEEECTTTCCEEE-EECCE--ETTEECCEEEEEEC-----
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCC--------EEEEEeCCCCcEEE-EEecc--cCCCCCCCceEEEe-----
Confidence 4556678889999999999 66554 79999999988753 44332 01122345566665
Q ss_pred CCC-cEEEEeeCCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCC
Q psy731 198 CDN-AFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSAN 275 (494)
Q Consensus 198 c~~-~~vYItDs~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~ 275 (494)
.+ +.+||++... +|.+||.+ ++..++ ..... ........++++|.
T Consensus 80 -~~~g~l~v~~~~~-~l~~~d~~-g~~~~~~~~~~~--------------------------~~~~~~~~~i~~d~---- 126 (314)
T 1pjx_A 80 -RDANQLFVADMRL-GLLVVQTD-GTFEEIAKKDSE--------------------------GRRMQGCNDCAFDY---- 126 (314)
T ss_dssp -SSSSEEEEEETTT-EEEEEETT-SCEEECCSBCTT--------------------------SCBCBCCCEEEECT----
T ss_pred -cCCCcEEEEECCC-CEEEEeCC-CCEEEEEeccCC--------------------------CccccCCcCEEECC----
Confidence 34 7899999855 89999998 776544 21000 01122356777773
Q ss_pred CCCcEEEEecCCC---------------CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeec---
Q psy731 276 CDDAFLYIADSGH---------------NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLS--- 337 (494)
Q Consensus 276 c~~~~~YI~D~~~---------------~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLs--- 337 (494)
++.+|+++... .+|.++|.. ++.-++.. -.....+|+++
T Consensus 127 --~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--------------------~~~~~~~i~~~~~~ 183 (314)
T 1pjx_A 127 --EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--------------------AFQFPNGIAVRHMN 183 (314)
T ss_dssp --TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--------------------EESSEEEEEEEECT
T ss_pred --CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--------------------CCCCcceEEEeccc
Confidence 35688998754 567777765 33222210 01224678888
Q ss_pred -cCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCC-CCCCeEEeeCCCCeEEEeccCCCeEEE
Q psy731 338 -PLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTG-SQSGASSLDEETGVIFYALLVKSGVGC 415 (494)
Q Consensus 338 -p~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~-~qs~g~~~D~~~G~ly~~~~~~~aI~~ 415 (494)
|+ ++.||+.......++....+ .+..+... ..+..+... . ....++++| ++|+||++....+.|.+
T Consensus 184 d~d----g~~l~v~~~~~~~i~~~~~~--~~g~~~~~---~~~~~~~~~--~~~~p~~i~~d-~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 184 DGR----PYQLIVAETPTKKLWSYDIK--GPAKIENK---KVWGHIPGT--HEGGADGMDFD-EDNNLLVANWGSSHIEV 251 (314)
T ss_dssp TSC----EEEEEEEETTTTEEEEEEEE--ETTEEEEE---EEEEECCCC--SSCEEEEEEEB-TTCCEEEEEETTTEEEE
T ss_pred CCC----CCEEEEEECCCCeEEEEECC--CCCccccc---eEEEECCCC--CCCCCCceEEC-CCCCEEEEEcCCCEEEE
Confidence 76 36899977665677766532 01111000 111111111 1 235789999 79999999998999999
Q ss_pred EeCCCCccccccceeeeeecCCeEecccceEEcCCce-EEEEecC
Q psy731 416 WNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGV-LWVLSNK 459 (494)
Q Consensus 416 w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~-Lwvlsnr 459 (494)
||+++| .+ ...+. . + ..+|.++.++++|. |||.++.
T Consensus 252 ~d~~~g-~~----~~~~~-~-~-~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 252 FGPDGG-QP----KMRIR-C-P-FEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp ECTTCB-SC----SEEEE-C-S-SSCEEEEEECTTSSEEEEEETT
T ss_pred EcCCCC-cE----eEEEe-C-C-CCCceeEEECCCCCEEEEEeCC
Confidence 999843 22 12222 1 1 25789999999997 9998753
No 21
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.26 E-value=3e-09 Score=108.03 Aligned_cols=224 Identities=17% Similarity=0.209 Sum_probs=153.5
Q ss_pred CceEEeeEEEc-CCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 125 NLTSVVKVQSD-PCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 125 ~lvsV~~i~iD-~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
.+..+.++..| ..++||+.|.... +|.++++.+......+. . +-.....++||. .++.+
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~--------~I~r~~~~g~~~~~~~~--~-----~~~~p~glavd~-----~~g~l 130 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLD--------RILRANLNGSNVEEVVS--T-----GLESPGGLAVDW-----VHDKL 130 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTT--------EEEEEETTSCSCEEEEC--S-----SCSCCCEEEEET-----TTTEE
T ss_pred CCCceEEEEEeccccEEEEEeccCC--------ceEEEecCCCCceEEEe--C-----CCCCccEEEEec-----CCCeE
Confidence 35567889999 5889999999876 89999998876443221 1 223457889985 57899
Q ss_pred EEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEE
Q psy731 204 YIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYI 283 (494)
Q Consensus 204 YItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI 283 (494)
|++|++.+.|.|++++......+-. ......++|+||. .++++|+
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~------------------------------~~l~~P~~iavdp-----~~g~ly~ 175 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLW------------------------------QSLEKPRAIALHP-----MEGTIYW 175 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEC------------------------------TTCSCEEEEEEET-----TTTEEEE
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEe------------------------------CCCCCcceEEEec-----CcCeEEE
Confidence 9999999999999987554332211 1123468899994 3589999
Q ss_pred ecCCC-CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeec
Q psy731 284 ADSGH-NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTT 362 (494)
Q Consensus 284 ~D~~~-~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T 362 (494)
+|.+. +.|.++++.......+... .+.+ -+|||++|+ .+.|||.--...+++++..
T Consensus 176 td~~~~~~I~r~~~dG~~~~~~~~~----------------~~~~---PnGla~d~~----~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 176 TDWGNTPRIEASSMDGSGRRIIADT----------------HLFW---PNGLTIDYA----GRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp EECSSSCEEEEEETTSCSCEESCCS----------------SCSC---EEEEEEETT----TTEEEEEETTTTEEEEEET
T ss_pred eccCCCCEEEEEeCCCCCcEEEEEC----------------CCCC---cceEEEeCC----CCEEEEEECCCCEEEEEeC
Confidence 99987 8898998875443222111 1122 367999986 3699997766667877764
Q ss_pred hhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecc
Q psy731 363 KVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYP 442 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~p 442 (494)
. .+ ..+.+...+ .....|++++ .|.||+++...++|.+.|..+| ++..++.. .+..|
T Consensus 233 d----G~--------~~~~~~~~~-~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G-----~~~~~i~~---~~~~p 289 (349)
T 3v64_C 233 D----GS--------HRKAVISQG-LPHPFAITVF--EDSLYWTDWHTKSINSANKFTG-----KNQEIIRN---KLHFP 289 (349)
T ss_dssp T----SC--------SCEEEECSS-CSSEEEEEEE--TTEEEEEETTTTEEEEEETTTC-----CSCEEEEC---SCSCC
T ss_pred C----CC--------ceEEEEeCC-CCCceEEEEE--CCEEEEecCCCCeEEEEEccCC-----CccEEecc---CCCCC
Confidence 2 11 111112111 2457899997 6899999999999999995443 24455553 35789
Q ss_pred cceEEcC
Q psy731 443 SDIRVDR 449 (494)
Q Consensus 443 d~~~id~ 449 (494)
.++++.+
T Consensus 290 ~gi~v~~ 296 (349)
T 3v64_C 290 MDIHTLH 296 (349)
T ss_dssp CCEEEEC
T ss_pred ceEEEEc
Confidence 9999865
No 22
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.26 E-value=1.5e-09 Score=108.44 Aligned_cols=210 Identities=12% Similarity=0.126 Sum_probs=138.4
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCC---ce-eEEecCccc
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTN---DS-HIIHHNYLH 232 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~---~~-~rv~~~~~~ 232 (494)
.|.++|+.+.++...+ + ..+....+.+|. .++.+|++|...+.|.++|+... +. ..+-.
T Consensus 11 ~I~~i~~~~~~~~~~~--~------~~~~p~g~~~d~-----~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~---- 73 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLI--P------NLRNVVALDTEV-----ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---- 73 (316)
T ss_dssp SEEEEETTSCCCEEEE--C------SCSSEEEEEEET-----TTTEEEEEETTTTEEEEEEC--------CEEEEC----
T ss_pred eEEEEECCCcceEehh--c------CCCceEEEEEEe-----CCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----
Confidence 3666777776654422 1 123344556653 57899999999999999998762 11 11100
Q ss_pred cCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccC
Q psy731 233 FDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFD 312 (494)
Q Consensus 233 ~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~d 312 (494)
.......+|++|. .++.+|++|...+.|.|+|+.+.....+....+
T Consensus 74 --------------------------~~~~~p~glavd~-----~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--- 119 (316)
T 1ijq_A 74 --------------------------RDIQAPDGLAVDW-----IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--- 119 (316)
T ss_dssp --------------------------SSCSCCCEEEEET-----TTTEEEEEETTTTEEEEEETTSSSEEEEEECTT---
T ss_pred --------------------------CCCCCcCEEEEee-----cCCeEEEEECCCCEEEEEeCCCCceEEEEECCC---
Confidence 0112346788883 257899999999999999998665433332111
Q ss_pred CCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC-cceEeeechhhcCCCcCccccccceEEecccCCCCCC
Q psy731 313 PLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS-TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQS 391 (494)
Q Consensus 313 P~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss-~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs 391 (494)
..-.|||++|. .+.||+.-... .+++++.. |.+ ..+.++..+ ....
T Consensus 120 ----------------~~P~~iavdp~----~g~ly~~d~~~~~~I~~~~~----dG~--------~~~~~~~~~-~~~P 166 (316)
T 1ijq_A 120 ----------------SKPRAIVVDPV----HGFMYWTDWGTPAKIKKGGL----NGV--------DIYSLVTEN-IQWP 166 (316)
T ss_dssp ----------------CCEEEEEEETT----TTEEEEEECSSSCEEEEEET----TSC--------CEEEEECSS-CSCE
T ss_pred ----------------CCcceEEeCCC----CCEEEEEccCCCCeEEEEcC----CCC--------CeEEEEECC-CCCc
Confidence 12357999886 36999987654 46776643 111 122232211 2457
Q ss_pred CeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 392 GASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 392 ~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
.|+++|+.+|.||+++...+.|.+.|.++ .+.++++.....+.+|.++.++ ++.||++.
T Consensus 167 ~gla~d~~~~~lY~~D~~~~~I~~~d~dg------~~~~~~~~~~~~~~~P~giav~-~~~ly~~d 225 (316)
T 1ijq_A 167 NGITLDLLSGRLYWVDSKLHSISSIDVNG------GNRKTILEDEKRLAHPFSLAVF-EDKVFWTD 225 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTS------CSCEEEEECTTTTSSEEEEEEE-TTEEEEEE
T ss_pred eEEEEeccCCEEEEEECCCCeEEEEecCC------CceEEEeecCCccCCcEEEEEE-CCEEEEEE
Confidence 89999988899999999999999999987 2456776654568899999997 57899986
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.23 E-value=5.1e-09 Score=104.36 Aligned_cols=270 Identities=11% Similarity=0.042 Sum_probs=168.4
Q ss_pred CcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCc-eEEeeEEEcCCCeEEEEeCCCCCCC
Q psy731 73 DRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNL-TSVVKVQSDPCDRLWALDSGVVEGK 151 (494)
Q Consensus 73 gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~l-vsV~~i~iD~~~~LwvlD~G~~~~~ 151 (494)
..+||.=-.|...-..+|..+..+. ++++.+= +...+...+ ..++.+.+| .++|||...+..
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t----------~~~~~~i---~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~--- 64 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPAT----------CEVENEV---FYRANGFKLGDVAQSMVIR-DGIGWIVVNNSH--- 64 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTT----------TEEECSH---HHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGT---
T ss_pred CeEEEEecCCCCCCCceEEEEECCC----------CEEhhhh---HhhhcCcccCccceEEEEE-CCEEEEEEcCCC---
Confidence 3567777776533467899998643 2333211 000011112 234566675 589999998765
Q ss_pred CCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeE-EecCc
Q psy731 152 MEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHI-IHHNY 230 (494)
Q Consensus 152 ~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~r-v~~~~ 230 (494)
.|.++|++|+++++++.- ......++++- ++.+|++|...+.|.|+|.++++..+ +.-..
T Consensus 65 -----~v~viD~~t~~~~~~i~~--------~~~p~~i~~~~------~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~ 125 (328)
T 3dsm_A 65 -----VIFAIDINTFKEVGRITG--------FTSPRYIHFLS------DEKAYVTQIWDYRIFIINPKTYEITGYIECPD 125 (328)
T ss_dssp -----EEEEEETTTCCEEEEEEC--------CSSEEEEEEEE------TTEEEEEEBSCSEEEEEETTTTEEEEEEECTT
T ss_pred -----EEEEEECcccEEEEEcCC--------CCCCcEEEEeC------CCeEEEEECCCCeEEEEECCCCeEEEEEEcCC
Confidence 899999999999998842 12345666642 34899999888999999999988643 31000
Q ss_pred cccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC-CCeEEEEEcCCCcEEEEecCCc
Q psy731 231 LHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG-HNHIVVYNYRTNDSHIIHHNYL 309 (494)
Q Consensus 231 ~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~-~~gliVydl~~~~swrv~~~~~ 309 (494)
...+......|+++ +..+|+++.+ ...|.|+|.++++.-+....
T Consensus 126 --------------------------~~~~~~~p~~i~~~-------~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-- 170 (328)
T 3dsm_A 126 --------------------------MDMESGSTEQMVQY-------GKYVYVNCWSYQNRILKIDTETDKVVDELTI-- 170 (328)
T ss_dssp --------------------------CCTTTCBCCCEEEE-------TTEEEEEECTTCCEEEEEETTTTEEEEEEEC--
T ss_pred --------------------------ccccCCCcceEEEE-------CCEEEEEcCCCCCEEEEEECCCCeEEEEEEc--
Confidence 00001134456663 4789999984 78999999998864322110
Q ss_pred ccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC----------cceEeeechhhcCCCcCccccccce
Q psy731 310 HFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS----------TTEFAVTTKVLQNRSLDFSRSNFDF 379 (494)
Q Consensus 310 ~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss----------~~ly~V~T~~L~~~~~~~~~~~~~v 379 (494)
..+..+|+++|+ | .+|+..+.. ..++.+.++-.+ +...+
T Consensus 171 ------------------g~~p~~i~~~~d---G--~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--------v~~~~ 219 (328)
T 3dsm_A 171 ------------------GIQPTSLVMDKY---N--KMWTITDGGYEGSPYGYEAPSLYRIDAETFT--------VEKQF 219 (328)
T ss_dssp ------------------SSCBCCCEECTT---S--EEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--------EEEEE
T ss_pred ------------------CCCccceEEcCC---C--CEEEEECCCccCCccccCCceEEEEECCCCe--------EEEEE
Confidence 012345889875 2 588877654 477887654221 11111
Q ss_pred EEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcC-CceEEEEe
Q psy731 380 KVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDR-TGVLWVLS 457 (494)
Q Consensus 380 ~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~-~g~Lwvls 457 (494)
. ++ .| ....++++++..+.||++.- .|.+||+.++ ... .... ... ....|.++.+|+ +|.|||..
T Consensus 220 ~-~~-~g--~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~-~~~--~~~~-~~~--~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 220 K-FK-LG--DWPSEVQLNGTRDTLYWINN---DIWRMPVEAD-RVP--VRPF-LEF--RDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp E-CC-TT--CCCEEEEECTTSCEEEEESS---SEEEEETTCS-SCC--SSCS-BCC--CSSCEEEEEECTTTCCEEEEE
T ss_pred e-cC-CC--CCceeEEEecCCCEEEEEcc---EEEEEECCCC-cee--eeee-ecC--CCCceEEEEEcCCCCeEEEEc
Confidence 1 11 12 24678999966778998865 8999999874 221 1111 111 146899999997 78999996
No 24
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.23 E-value=9.9e-09 Score=102.46 Aligned_cols=226 Identities=18% Similarity=0.231 Sum_probs=149.4
Q ss_pred ceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCC---cEEEEEEcCCCccccccCCccceEEEeecCCCCCc
Q psy731 126 LTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQ---MQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNA 201 (494)
Q Consensus 126 lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~---~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~ 201 (494)
+..+.++..|. .++||+.|.+.. +|.++|+.+. ....++ ++. .-.....++||. .++
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~--------~I~~~~~~g~~~~~~~~~~-~~~-----~~~~p~glavd~-----~~~ 89 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQR--------MICSTQLDRAHGVSSYDTV-ISR-----DIQAPDGLAVDW-----IHS 89 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTT--------EEEEEEC--------CEEE-ECS-----SCSCCCEEEEET-----TTT
T ss_pred CCceEEEEEEeCCCEEEEEECCCC--------cEEEEECCCCCCCcccEEE-EeC-----CCCCcCEEEEee-----cCC
Confidence 55678899995 679999999876 8999999862 222211 222 223457888984 478
Q ss_pred EEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEE
Q psy731 202 FLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFL 281 (494)
Q Consensus 202 ~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~ 281 (494)
.+|++|+..+.|.|+|++......+-. .......+|+||. .++++
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~------------------------------~~~~~P~~iavdp-----~~g~l 134 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFR------------------------------ENGSKPRAIVVDP-----VHGFM 134 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEE------------------------------CTTCCEEEEEEET-----TTTEE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEE------------------------------CCCCCcceEEeCC-----CCCEE
Confidence 999999999999999987554433311 1123467899984 35799
Q ss_pred EEecCCC-CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEee
Q psy731 282 YIADSGH-NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAV 360 (494)
Q Consensus 282 YI~D~~~-~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V 360 (494)
|++|.+. +.|.++++.......+... .+.+ -.|||++|+ .+.|||.-....+++++
T Consensus 135 y~~d~~~~~~I~~~~~dG~~~~~~~~~----------------~~~~---P~gla~d~~----~~~lY~~D~~~~~I~~~ 191 (316)
T 1ijq_A 135 YWTDWGTPAKIKKGGLNGVDIYSLVTE----------------NIQW---PNGITLDLL----SGRLYWVDSKLHSISSI 191 (316)
T ss_dssp EEEECSSSCEEEEEETTSCCEEEEECS----------------SCSC---EEEEEEETT----TTEEEEEETTTTEEEEE
T ss_pred EEEccCCCCeEEEEcCCCCCeEEEEEC----------------CCCC---ceEEEEecc----CCEEEEEECCCCeEEEE
Confidence 9999875 7888888865443222211 1122 457999986 36999987766688877
Q ss_pred echhhcCCCcCccccccceEEeccc-CCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeE
Q psy731 361 TTKVLQNRSLDFSRSNFDFKVMGSR-GTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATL 439 (494)
Q Consensus 361 ~T~~L~~~~~~~~~~~~~v~~~G~~-G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l 439 (494)
... .+ ..+.+.+. +......|+++| .|.||+++...+.|.++|+.+| +...++.. .|
T Consensus 192 d~d----g~--------~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g-----~~~~~i~~---~~ 249 (316)
T 1ijq_A 192 DVN----GG--------NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTG-----SDVNLLAE---NL 249 (316)
T ss_dssp ETT----SC--------SCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTC-----CCCEEEEC---SC
T ss_pred ecC----CC--------ceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCC-----cceEEEec---CC
Confidence 643 11 11222221 112456899999 4899999999999999998653 23455543 25
Q ss_pred ecccceEEcCC
Q psy731 440 IYPSDIRVDRT 450 (494)
Q Consensus 440 ~~pd~~~id~~ 450 (494)
.-|.++++.+.
T Consensus 250 ~~p~~i~v~~~ 260 (316)
T 1ijq_A 250 LSPEDMVLFHN 260 (316)
T ss_dssp SCCCCEEEESG
T ss_pred CCceEEEEecc
Confidence 66889988653
No 25
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.20 E-value=3.3e-09 Score=103.73 Aligned_cols=238 Identities=10% Similarity=0.054 Sum_probs=144.9
Q ss_pred ceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE
Q psy731 126 LTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 126 lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
+.-..++.-|+ .++||+.|.... +|++||+.++++ +.+.++. ....+++| .++.+|
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~--------~i~~~d~~~~~~-~~~~~~~--------~~~~i~~~------~dG~l~ 68 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAK--------KVCRWDSFTKQV-QRVTMDA--------PVSSVALR------QSGGYV 68 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTT--------EEEEEETTTCCE-EEEECSS--------CEEEEEEB------TTSSEE
T ss_pred CccccCCeEECCCCEEEEEECCCC--------EEEEEECCCCcE-EEEeCCC--------ceEEEEEC------CCCCEE
Confidence 34455666665 689999999877 899999999876 4465544 34455664 234488
Q ss_pred EeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 205 IADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 205 ItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
++. ..+|.+||.++++...+..... -.+...++++++|. ++.+|++
T Consensus 69 v~~--~~~l~~~d~~~g~~~~~~~~~~--------------------------~~~~~~~~di~~d~------dG~l~~~ 114 (297)
T 3g4e_A 69 ATI--GTKFCALNWKEQSAVVLATVDN--------------------------DKKNNRFNDGKVDP------AGRYFAG 114 (297)
T ss_dssp EEE--TTEEEEEETTTTEEEEEEECCT--------------------------TCSSEEEEEEEECT------TSCEEEE
T ss_pred EEE--CCeEEEEECCCCcEEEEEecCC--------------------------CCCCCCCCCEEECC------CCCEEEe
Confidence 886 5789999999998876632110 11234567788874 3447887
Q ss_pred cCCC-----------CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC
Q psy731 285 DSGH-----------NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA 353 (494)
Q Consensus 285 D~~~-----------~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls 353 (494)
+... .+|..+|.. ++.-++. . . ....+||++||+ ++.||+.-..
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~---------------~--~---~~~pngi~~spd----g~~lyv~~~~ 169 (297)
T 3g4e_A 115 TMAEETAPAVLERHQGALYSLFPD-HHVKKYF---------------D--Q---VDISNGLDWSLD----HKIFYYIDSL 169 (297)
T ss_dssp EEECCSBTTBCCTTCEEEEEECTT-SCEEEEE---------------E--E---ESBEEEEEECTT----SCEEEEEEGG
T ss_pred cCCcccccccccCCCcEEEEEECC-CCEEEEe---------------e--c---cccccceEEcCC----CCEEEEecCC
Confidence 7432 234444332 1111110 0 1 123578999997 3789997655
Q ss_pred CcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeee
Q psy731 354 STTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVA 433 (494)
Q Consensus 354 s~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~ 433 (494)
..+++..... ..+..+.. .+.+..+... ....+|+++| ++|+||++....+.|.+||+++| .+ ...+.
T Consensus 170 ~~~i~~~~~d-~~~G~~~~---~~~~~~~~~~--~~~p~g~~~d-~~G~lwva~~~~~~v~~~d~~tG-~~----~~~i~ 237 (297)
T 3g4e_A 170 SYSVDAFDYD-LQTGQISN---RRSVYKLEKE--EQIPDGMCID-AEGKLWVACYNGGRVIRLDPVTG-KR----LQTVK 237 (297)
T ss_dssp GTEEEEEEEC-TTTCCEEE---EEEEEECCGG--GCEEEEEEEB-TTSCEEEEEETTTEEEEECTTTC-CE----EEEEE
T ss_pred CCcEEEEecc-CCCCcccC---cEEEEECCCC--CCCCCeeEEC-CCCCEEEEEcCCCEEEEEcCCCc-eE----EEEEE
Confidence 5566665431 01111111 0112222221 1346899999 88999999999999999999854 22 23332
Q ss_pred ecCCeEecccceEEc-CCc-eEEEEecCc
Q psy731 434 EDNATLIYPSDIRVD-RTG-VLWVLSNKL 460 (494)
Q Consensus 434 ~d~~~l~~pd~~~id-~~g-~Lwvlsnrl 460 (494)
. +. ..|..+.++ +++ .|||++++-
T Consensus 238 ~-p~--~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 238 L-PV--DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp C-SS--SBEEEEEEESGGGCEEEEEEBCT
T ss_pred C-CC--CCceEEEEeCCCCCEEEEEcCCc
Confidence 2 11 367888886 444 799999763
No 26
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.19 E-value=5.3e-09 Score=106.25 Aligned_cols=179 Identities=16% Similarity=0.140 Sum_probs=125.8
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDD 278 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~ 278 (494)
.++.+|++|...+.|.++++..+....+-. .......+|+||- .+
T Consensus 83 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~------------------------------~~~~~p~glavd~-----~~ 127 (349)
T 3v64_C 83 RRELVFWSDVTLDRILRANLNGSNVEEVVS------------------------------TGLESPGGLAVDW-----VH 127 (349)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEC------------------------------SSCSCCCEEEEET-----TT
T ss_pred cccEEEEEeccCCceEEEecCCCCceEEEe------------------------------CCCCCccEEEEec-----CC
Confidence 678999999999999999988776544411 0112356788984 35
Q ss_pred cEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC-cce
Q psy731 279 AFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS-TTE 357 (494)
Q Consensus 279 ~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss-~~l 357 (494)
+.+|++|.....|.++++.+.....+....+ ..-.|||++|. .+.|||.-... .++
T Consensus 128 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l-------------------~~P~~iavdp~----~g~ly~td~~~~~~I 184 (349)
T 3v64_C 128 DKLYWTDSGTSRIEVANLDGAHRKVLLWQSL-------------------EKPRAIALHPM----EGTIYWTDWGNTPRI 184 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECTTC-------------------SCEEEEEEETT----TTEEEEEECSSSCEE
T ss_pred CeEEEEcCCCCeEEEEcCCCCceEEEEeCCC-------------------CCcceEEEecC----cCeEEEeccCCCCEE
Confidence 7899999999999999988654332222111 11367999986 36999976655 677
Q ss_pred EeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCC
Q psy731 358 FAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNA 437 (494)
Q Consensus 358 y~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~ 437 (494)
+++... .+ ..+.+...+ .....|+++|+.+|.||+++...+.|.+++.++ .+..+++..
T Consensus 185 ~r~~~d----G~--------~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG------~~~~~~~~~-- 243 (349)
T 3v64_C 185 EASSMD----GS--------GRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG------SHRKAVISQ-- 243 (349)
T ss_dssp EEEETT----SC--------SCEESCCSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS------CSCEEEECS--
T ss_pred EEEeCC----CC--------CcEEEEECC-CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC------CceEEEEeC--
Confidence 777542 11 112222222 245689999988999999999999999999987 234455543
Q ss_pred eEecccceEEcCCceEEEEe
Q psy731 438 TLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 438 ~l~~pd~~~id~~g~Lwvls 457 (494)
.+.+|+|+.++ ++.||++.
T Consensus 244 ~~~~P~giav~-~~~ly~td 262 (349)
T 3v64_C 244 GLPHPFAITVF-EDSLYWTD 262 (349)
T ss_dssp SCSSEEEEEEE-TTEEEEEE
T ss_pred CCCCceEEEEE-CCEEEEec
Confidence 37899999995 67899985
No 27
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.17 E-value=3.4e-08 Score=94.71 Aligned_cols=225 Identities=11% Similarity=0.067 Sum_probs=149.1
Q ss_pred ceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE
Q psy731 126 LTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 126 lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
...+.++.+|. .++||+.|.+.. +|.++|+.+..+...+ +. .-.....+++|. .++++|
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~--------~I~~~~~~g~~~~~~~--~~-----~~~~p~~ia~d~-----~~~~ly 94 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEP--------SIGRASLHGGEPTTII--RQ-----DLGSPEGIALDH-----LGRTIF 94 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTT--------EEEEEESSSCCCEEEE--CT-----TCCCEEEEEEET-----TTTEEE
T ss_pred CCcEEEEEEecCCCEEEEEECCCC--------EEEEEecCCCCcEEEE--EC-----CCCCccEEEEEe-----cCCeEE
Confidence 35678999997 679999999876 8999999877643322 22 234567888874 468999
Q ss_pred EeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 205 IADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 205 ItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
++|...+.|.++|+.......+-. ......++|++|. +++++|++
T Consensus 95 v~d~~~~~I~~~~~~g~~~~~~~~------------------------------~~~~~P~~i~vd~-----~~g~lyv~ 139 (267)
T 1npe_A 95 WTDSQLDRIEVAKMDGTQRRVLFD------------------------------TGLVNPRGIVTDP-----VRGNLYWT 139 (267)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEC------------------------------SSCSSEEEEEEET-----TTTEEEEE
T ss_pred EEECCCCEEEEEEcCCCCEEEEEE------------------------------CCCCCccEEEEee-----CCCEEEEE
Confidence 999999999999987543322210 0113467888884 35899999
Q ss_pred cCC--CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeec
Q psy731 285 DSG--HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTT 362 (494)
Q Consensus 285 D~~--~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T 362 (494)
|.. .+.|.++++.....-.+... .+ ..-.|||++|+ ++.||+.-..+.+++++..
T Consensus 140 ~~~~~~~~I~~~~~dg~~~~~~~~~----------------~~---~~P~gia~d~~----~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGTNRRILAQD----------------NL---GLPNGLTFDAF----SSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp ECCSSSCEEEEEETTSCCCEEEECT----------------TC---SCEEEEEEETT----TTEEEEEETTTTEEEEEET
T ss_pred ECCCCCcEEEEEecCCCCcEEEEEC----------------CC---CCCcEEEEcCC----CCEEEEEECCCCEEEEEec
Confidence 987 46788888764332111111 01 12467999986 3699998887778888765
Q ss_pred hhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecc
Q psy731 363 KVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYP 442 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~p 442 (494)
+-. ..+.+.+.+ ....|+++| .|.||+++...+.|.++|+++|. -...+... ...-|
T Consensus 197 ~g~------------~~~~~~~~~--~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~-----~~~~i~~g--~~~~p 253 (267)
T 1npe_A 197 AQP------------GRRKVLEGL--QYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISK-----EMDTFHPH--KQTRL 253 (267)
T ss_dssp TEE------------EEEEEEECC--CSEEEEEEE--TTEEEEEETTTTEEEEEETTTTE-----EEEEECCS--SCCCC
T ss_pred CCC------------ceEEEecCC--CCceEEEEe--CCEEEEEECCCCeEEEEeCCCCC-----ceEEEccc--ccccc
Confidence 311 011111211 234689998 58999999999999999998642 12333221 22348
Q ss_pred cceEEcCCc
Q psy731 443 SDIRVDRTG 451 (494)
Q Consensus 443 d~~~id~~g 451 (494)
.++.+.+++
T Consensus 254 ~gi~~~~~~ 262 (267)
T 1npe_A 254 YGITIALSQ 262 (267)
T ss_dssp CCEEEECSC
T ss_pred ceeeecCcc
Confidence 888887665
No 28
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.17 E-value=2.9e-09 Score=114.31 Aligned_cols=268 Identities=10% Similarity=0.093 Sum_probs=162.3
Q ss_pred CCCceEEeeEEEcC--CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEE-------Ee
Q psy731 123 ARNLTSVVKVQSDP--CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVV-------DV 193 (494)
Q Consensus 123 ~~~lvsV~~i~iD~--~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vV-------D~ 193 (494)
|.+|....+|.+|+ .++|||.+-+.- .|.++|++++++......+. ..-..+.++.+ |.
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~--------~i~~ID~~~~~v~~l~~~~~----~~~~~p~~ia~~~~~~~~d~ 202 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHK--------AIQLIDLKNRMLSSPLNINT----IPTNRIRSIAFNKKIEGYAD 202 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEE--------EEEEEETTTTEEEEEECCTT----SSCSBEEEEEECCCBTTTBC
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCC--------eEEEEECCCCEEEEEEccCc----cccCCCcEEEEeecccccCC
Confidence 77788999999995 589999997654 69999999999987554332 12234666777 53
Q ss_pred ecCCCCCcEEEEeeCCC------CeEEEEEccCCceeE--EecCccccCCCCCccccCCccceeeeecccccccccccce
Q psy731 194 TSANCDNAFLYIADSGH------NHIVVYNYRTNDSHI--IHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFS 265 (494)
Q Consensus 194 ~~~~c~~~~vYItDs~~------~~iIVyd~~~~~~~r--v~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~ 265 (494)
+..++||+|... .++++++.+.+..|. -+. ..+.......
T Consensus 203 -----~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~---------------------------~~v~~~~~p~ 250 (496)
T 3kya_A 203 -----EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDI---------------------------QLIAAYKQCN 250 (496)
T ss_dssp -----TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCE---------------------------EEEEEESCCC
T ss_pred -----CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccc---------------------------eeeccCCCce
Confidence 455899999986 358888754422221 000 0001112345
Q ss_pred eeEEeeecCCCCCcEEEEecCCCCeEEEEEcC-------CCcEEEEecCCcccCCCCcc-eEEcCEEeeeecceeeeeec
Q psy731 266 NMVVDVTSANCDDAFLYIADSGHNHIVVYNYR-------TNDSHIIHHNYLHFDPLFGD-FTIGGVNFQWQTGIHGMSLS 337 (494)
Q Consensus 266 ~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~-------~~~swrv~~~~~~~dP~~~~-~~v~G~~f~~~~Gi~gIaLs 337 (494)
.+++|. +++++|++|.....|.+||++ ++..|.-.+.... . .... +.+.+ ...-.+||++
T Consensus 251 giavdp-----~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~-g-~~~~l~~~~~-----~~~p~~ia~~ 318 (496)
T 3kya_A 251 GATIHP-----INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP-N-TFKQLFTIAD-----PSWEFQIFIH 318 (496)
T ss_dssp CEEECT-----TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT-T-TEEEEEECSS-----SSCCEEEEEC
T ss_pred EEEEcC-----CCCeEEEEECCCCEEEEEecccccccccCceeecccccccc-c-ccceeEecCC-----CCCceEEEEc
Confidence 667764 368999999999899999998 6665432221100 0 0000 11110 0113579999
Q ss_pred cCCCCCceeEEEeeCCCcceEeeechh----hcCCCc-CccccccceEE-ecccCCCCCCC-eEEeeC------CCCeEE
Q psy731 338 PLTRDNFRVMYFHPLASTTEFAVTTKV----LQNRSL-DFSRSNFDFKV-MGSRGTGSQSG-ASSLDE------ETGVIF 404 (494)
Q Consensus 338 p~~~~g~r~LYf~plss~~ly~V~T~~----L~~~~~-~~~~~~~~v~~-~G~~G~~~qs~-g~~~D~------~~G~ly 404 (494)
|++ +.||+.--...+++++...- |.+... ....-..-+.. .+......+.. |+++|. ..|+||
T Consensus 319 p~G----~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~ly 394 (496)
T 3kya_A 319 PTG----KYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFY 394 (496)
T ss_dssp TTS----SEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEE
T ss_pred CCC----CEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEE
Confidence 873 68999887777888875321 111110 00000000000 00011112233 778872 479999
Q ss_pred EeccCCCeEEEEeCCCCccccccceeeeeec---------------------CCeEecccceEEcCC-ceEEEEe
Q psy731 405 YALLVKSGVGCWNTFRGEEYNEKSMGLVAED---------------------NATLIYPSDIRVDRT-GVLWVLS 457 (494)
Q Consensus 405 ~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d---------------------~~~l~~pd~~~id~~-g~Lwvls 457 (494)
+++...+.|.++++++ . +.+++-. ..+|.+|.++.+|++ |.|||.-
T Consensus 395 VaD~~N~rIr~i~~~G--~-----v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD 462 (496)
T 3kya_A 395 FVDRLNFCVRKVTPEG--I-----VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHD 462 (496)
T ss_dssp EEEGGGTEEEEECTTC--B-----EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEE
T ss_pred EEECCCCEEEEEeCCC--C-----EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEe
Confidence 9999999999999877 3 3344311 136899999999996 9999984
No 29
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.17 E-value=8e-09 Score=101.23 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=146.1
Q ss_pred CCceEEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcE
Q psy731 124 RNLTSVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAF 202 (494)
Q Consensus 124 ~~lvsV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~ 202 (494)
.++....++..|++++ |++.|.... +|.+||. ++++ +.+..+. ...+.+.+| .++.
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~--------~i~~~~~-~g~~-~~~~~~~-------~~~~gl~~d------~dG~ 98 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGR--------RVLGWRE-DGTV-DVLLDAT-------AFTNGNAVD------AQQR 98 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTT--------EEEEEET-TSCE-EEEEESC-------SCEEEEEEC------TTSC
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCC--------EEEEEeC-CCCE-EEEeCCC-------CccceeeEC------CCCC
Confidence 3455667888888776 888998776 7999998 5553 4444333 345677776 3566
Q ss_pred EEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEE
Q psy731 203 LYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLY 282 (494)
Q Consensus 203 vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~Y 282 (494)
+|+++.+.++|.+||.+ |+...+....- -......+++++|. ++-+|
T Consensus 99 l~v~~~~~~~v~~~~~~-g~~~~~~~~~~--------------------------~~~~~~~~~i~~d~------dG~l~ 145 (305)
T 3dr2_A 99 LVHCEHGRRAITRSDAD-GQAHLLVGRYA--------------------------GKRLNSPNDLIVAR------DGAIW 145 (305)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECEET--------------------------TEECSCCCCEEECT------TSCEE
T ss_pred EEEEECCCCEEEEECCC-CCEEEEEeccC--------------------------CCccCCCCCEEECC------CCCEE
Confidence 99999999999999986 77655521100 01112356788873 45689
Q ss_pred EecCC-----------------CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCce
Q psy731 283 IADSG-----------------HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFR 345 (494)
Q Consensus 283 I~D~~-----------------~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r 345 (494)
++|.. ..+|.+||.++++.-++. . ....+||++||+ ++
T Consensus 146 ~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--------------------~~~p~gl~~spd----g~ 200 (305)
T 3dr2_A 146 FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--------------------LDHPNGLAFSPD----EQ 200 (305)
T ss_dssp EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--------------------ESSEEEEEECTT----SS
T ss_pred EeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c--------------------CCCCcceEEcCC----CC
Confidence 98852 256778877666543332 1 123567999997 37
Q ss_pred eEEEeeCCC-----cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 346 VMYFHPLAS-----TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 346 ~LYf~plss-----~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
+||+.-... .+++....+- ..+.. .+.+.+.+ ....+|+++| .+|+||++. .++|.+|++++
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~---~~l~~------~~~~~~~~-~~~pdgi~~d-~~G~lwv~~--~~gv~~~~~~g 267 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRD---GALHD------RRHFASVP-DGLPDGFCVD-RGGWLWSSS--GTGVCVFDSDG 267 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEET---TEEEE------EEEEECCS-SSCCCSEEEC-TTSCEEECC--SSEEEEECTTS
T ss_pred EEEEEecCCcCCCCCEEEEEEecC---CCccC------CeEEEECC-CCCCCeEEEC-CCCCEEEec--CCcEEEECCCC
Confidence 899965442 3555543221 00111 11111111 2346899999 899999998 56899999987
Q ss_pred CccccccceeeeeecCCeEecccceEEcCCc-eEEEEecC
Q psy731 421 GEEYNEKSMGLVAEDNATLIYPSDIRVDRTG-VLWVLSNK 459 (494)
Q Consensus 421 ~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g-~Lwvlsnr 459 (494)
. .+..+... + .|..+.+++++ .|||.+++
T Consensus 268 --~----~~~~~~~~-~---~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 268 --Q----LLGHIPTP-G---TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp --C----EEEEEECS-S---CCCEEEECTTSCEEEEEETT
T ss_pred --C----EEEEEECC-C---ceeEEEEeCCCCEEEEEcCC
Confidence 2 23344332 2 47888887665 79999864
No 30
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.17 E-value=8.6e-09 Score=98.90 Aligned_cols=188 Identities=12% Similarity=0.155 Sum_probs=126.9
Q ss_pred CCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeeccccccccccc
Q psy731 184 SKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESK 263 (494)
Q Consensus 184 S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~ 263 (494)
.....+++|. .++++|++|.+.+.|.++|+..+....+-. .....
T Consensus 36 ~~~~gi~~d~-----~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~------------------------------~~~~~ 80 (267)
T 1npe_A 36 KVIIGLAFDC-----VDKVVYWTDISEPSIGRASLHGGEPTTIIR------------------------------QDLGS 80 (267)
T ss_dssp EEEEEEEEET-----TTTEEEEEETTTTEEEEEESSSCCCEEEEC------------------------------TTCCC
T ss_pred CcEEEEEEec-----CCCEEEEEECCCCEEEEEecCCCCcEEEEE------------------------------CCCCC
Confidence 3455677763 578999999999999999998765433310 01124
Q ss_pred ceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCC
Q psy731 264 FSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDN 343 (494)
Q Consensus 264 ~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g 343 (494)
...|++|. +++.+|++|...+.|.++++.+...-.+.... + ..-.||+++|+
T Consensus 81 p~~ia~d~-----~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~----------------~---~~P~~i~vd~~---- 132 (267)
T 1npe_A 81 PEGIALDH-----LGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG----------------L---VNPRGIVTDPV---- 132 (267)
T ss_dssp EEEEEEET-----TTTEEEEEETTTTEEEEEETTSCSCEEEECSS----------------C---SSEEEEEEETT----
T ss_pred ccEEEEEe-----cCCeEEEEECCCCEEEEEEcCCCCEEEEEECC----------------C---CCccEEEEeeC----
Confidence 57788884 35789999999999999998754322221110 0 12467999986
Q ss_pred ceeEEEeeCC--CcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 344 FRVMYFHPLA--STTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 344 ~r~LYf~pls--s~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
++.||+.-.. +.+++++.. |.. ..+.+...+ .....|+++|+..+.||+++...+.|.++++++
T Consensus 133 ~g~lyv~~~~~~~~~I~~~~~----dg~--------~~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g- 198 (267)
T 1npe_A 133 RGNLYWTDWNRDNPKIETSHM----DGT--------NRRILAQDN-LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ- 198 (267)
T ss_dssp TTEEEEEECCSSSCEEEEEET----TSC--------CCEEEECTT-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-
T ss_pred CCEEEEEECCCCCcEEEEEec----CCC--------CcEEEEECC-CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-
Confidence 3699997755 346665542 111 112222211 245789999966789999999999999999987
Q ss_pred ccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 422 EEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 422 ~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
. +...+.. .+.+|.++.+| +++|||..
T Consensus 199 -~----~~~~~~~---~~~~P~gi~~d-~~~lyva~ 225 (267)
T 1npe_A 199 -P----GRRKVLE---GLQYPFAVTSY-GKNLYYTD 225 (267)
T ss_dssp -E----EEEEEEE---CCCSEEEEEEE-TTEEEEEE
T ss_pred -C----ceEEEec---CCCCceEEEEe-CCEEEEEE
Confidence 2 2233332 36789999998 68999985
No 31
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.16 E-value=3.8e-09 Score=108.75 Aligned_cols=188 Identities=15% Similarity=0.125 Sum_probs=129.3
Q ss_pred CccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccc
Q psy731 185 KFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKF 264 (494)
Q Consensus 185 ~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~ 264 (494)
....+.+|. .++.+|++|...+.|.++++..+....+-. ......
T Consensus 117 ~~~gl~~d~-----~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~------------------------------~~~~~p 161 (386)
T 3v65_B 117 NAIALDFHH-----RRELVFWSDVTLDRILRANLNGSNVEEVVS------------------------------TGLESP 161 (386)
T ss_dssp CEEEEEEET-----TTTEEEEEETTTTEEEEEETTSCCEEEEEC------------------------------SSCSCC
T ss_pred ccEEEEEec-----CCCeEEEEeCCCCcEEEEecCCCCcEEEEe------------------------------CCCCCc
Confidence 344555653 578999999999999999988776544411 111234
Q ss_pred eeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCc
Q psy731 265 SNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNF 344 (494)
Q Consensus 265 ~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~ 344 (494)
.+|+||. .++.+|++|.....|.++++.+...-.+....+ ..-.|||++|. .
T Consensus 162 ~glavd~-----~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l-------------------~~P~giavdp~----~ 213 (386)
T 3v65_B 162 GGLAVDW-----VHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSL-------------------EKPRAIALHPM----E 213 (386)
T ss_dssp CCEEEET-----TTTEEEEEETTTTEEEECBTTSCSCEEEECSSC-------------------SCEEEEEEETT----T
T ss_pred cEEEEEe-----CCCeEEEEcCCCCeEEEEeCCCCceEEeecCCC-------------------CCCcEEEEEcC----C
Confidence 6788984 357899999999999999887554322222111 12367999986 3
Q ss_pred eeEEEeeCCC-cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCcc
Q psy731 345 RVMYFHPLAS-TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEE 423 (494)
Q Consensus 345 r~LYf~plss-~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~ 423 (494)
+.|||.-... .+++++... .+ ..+.+...+ .....|+++|+..|.||+++...+.|.+++.++
T Consensus 214 g~ly~td~~~~~~I~r~~~d----G~--------~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG--- 277 (386)
T 3v65_B 214 GTIYWTDWGNTPRIEASSMD----GS--------GRRIIADTH-LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG--- 277 (386)
T ss_dssp TEEEEEECSSSCEEEEEETT----SC--------SCEEEECSS-CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS---
T ss_pred CeEEEeccCCCCEEEEEeCC----CC--------CcEEEEECC-CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC---
Confidence 6999976655 577777532 11 122233222 245689999988999999999999999999987
Q ss_pred ccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 424 YNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 424 ~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
.+..+++.. .+.+|+|+.++ ++.||++.
T Consensus 278 ---~~~~~~~~~--~~~~P~giav~-~~~ly~td 305 (386)
T 3v65_B 278 ---SHRKAVISQ--GLPHPFAITVF-EDSLYWTD 305 (386)
T ss_dssp ---CSCEEEECS--SCSSEEEEEEE-TTEEEEEE
T ss_pred ---CeeEEEEEC--CCCCceEEEEE-CCEEEEee
Confidence 233455543 37899999995 56899885
No 32
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.14 E-value=4.9e-08 Score=93.42 Aligned_cols=248 Identities=11% Similarity=0.116 Sum_probs=155.4
Q ss_pred CCeeeeeeee-CCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEE-cCCCe
Q psy731 62 NCLPVSLDKW-HDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQS-DPCDR 139 (494)
Q Consensus 62 ~~~p~gv~v~-~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~i-D~~~~ 139 (494)
-.-|.++++. +|++|++--. ..+|..+..+ + ..+..++.... ....+..+..+.+ +..++
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~-----~~~i~~~d~~-g---------~~~~~~~~~~~---~~~~~~~p~~i~~~~~~g~ 90 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTN-----NHRIQIFDKE-G---------RFKFQFGECGK---RDSQLLYPNRVAVVRNSGD 90 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGG-----GTEEEEECTT-S---------CEEEEECCBSS---STTCBSSEEEEEEETTTTE
T ss_pred cCCCceEEECCCCCEEEEECC-----CCEEEEECCC-C---------cEEEEecccCC---CcccccCceEEEEEcCCCe
Confidence 3568999984 7899998422 1245555432 1 12333332110 1234566788888 58999
Q ss_pred EEEEeCC-CCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEc
Q psy731 140 LWALDSG-VVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNY 218 (494)
Q Consensus 140 LwvlD~G-~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~ 218 (494)
|||.|.+ .. .|.+|| .++++++++..+. .....++++| .++.+||+|...+.|.+||.
T Consensus 91 l~v~~~~~~~--------~i~~~d-~~g~~~~~~~~~~------~~~~~~i~~~------~~g~l~v~~~~~~~i~~~~~ 149 (286)
T 1q7f_A 91 IIVTERSPTH--------QIQIYN-QYGQFVRKFGATI------LQHPRGVTVD------NKGRIIVVECKVMRVIIFDQ 149 (286)
T ss_dssp EEEEECGGGC--------EEEEEC-TTSCEEEEECTTT------CSCEEEEEEC------TTSCEEEEETTTTEEEEECT
T ss_pred EEEEcCCCCC--------EEEEEC-CCCcEEEEecCcc------CCCceEEEEe------CCCCEEEEECCCCEEEEEcC
Confidence 9999975 33 799999 6788877764332 3455677776 34569999999999999997
Q ss_pred cCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCC
Q psy731 219 RTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRT 298 (494)
Q Consensus 219 ~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~ 298 (494)
.....+.+... ........|++|. ++.+|++|.....|.+||..+
T Consensus 150 ~g~~~~~~~~~-----------------------------~~~~~p~~i~~~~------~g~l~v~~~~~~~i~~~~~~g 194 (286)
T 1q7f_A 150 NGNVLHKFGCS-----------------------------KHLEFPNGVVVND------KQEIFISDNRAHCVKVFNYEG 194 (286)
T ss_dssp TSCEEEEEECT-----------------------------TTCSSEEEEEECS------SSEEEEEEGGGTEEEEEETTC
T ss_pred CCCEEEEeCCC-----------------------------CccCCcEEEEECC------CCCEEEEECCCCEEEEEcCCC
Confidence 65444444210 1112356778874 356999999999999999876
Q ss_pred CcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCcccccc
Q psy731 299 NDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNF 377 (494)
Q Consensus 299 ~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~ 377 (494)
...+.+..... .....+|+++++ | .||+...... .+..... +..
T Consensus 195 ~~~~~~~~~g~------------------~~~p~~i~~d~~---G--~l~v~~~~~~~~i~~~~~----~g~-------- 239 (286)
T 1q7f_A 195 QYLRQIGGEGI------------------TNYPIGVGINSN---G--EILIADNHNNFNLTIFTQ----DGQ-------- 239 (286)
T ss_dssp CEEEEESCTTT------------------SCSEEEEEECTT---C--CEEEEECSSSCEEEEECT----TSC--------
T ss_pred CEEEEEccCCc------------------cCCCcEEEECCC---C--CEEEEeCCCCEEEEEECC----CCC--------
Confidence 65554432110 022567999875 3 6888765543 4544431 111
Q ss_pred ceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 378 DFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 378 ~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
.++.+...+......++++| .+|.||++. ..+.|..|+...
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~-~~g~l~vs~-~~~~v~v~~~~~ 280 (286)
T 1q7f_A 240 LISALESKVKHAQCFDVALM-DDGSVVLAS-KDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEEEESSCCSCEEEEEEE-TTTEEEEEE-TTTEEEEEECSC
T ss_pred EEEEEcccCCCCcceeEEEC-CCCcEEEEC-CCCeEEEEEccc
Confidence 12222222112234589999 799999997 478999998764
No 33
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.13 E-value=5.3e-08 Score=98.01 Aligned_cols=226 Identities=15% Similarity=0.185 Sum_probs=151.6
Q ss_pred CceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 125 NLTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 125 ~lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
++.++.++..|. .++||+.|.... +|.++++.+......+ +. ..-.....++||. .++.+
T Consensus 33 ~~~~~~~ld~d~~~~~lyw~D~~~~--------~I~r~~~~g~~~~~~~-~~-----~~l~~p~glavd~-----~~g~l 93 (318)
T 3sov_A 33 GLEDAAAVDFVFSHGLIYWSDVSEE--------AIKRTEFNKTESVQNV-VV-----SGLLSPDGLACDW-----LGEKL 93 (318)
T ss_dssp EEEEEEEEEEEGGGTEEEEEETTTT--------EEEEEETTSSSCCCEE-EE-----ECCSCCCEEEEET-----TTTEE
T ss_pred CCCccEEEEEEeCCCEEEEEECCCC--------cEEEEEccCCCceEEE-Ec-----CCCCCccEEEEEc-----CCCeE
Confidence 467788888885 689999999887 8999999876321111 01 1223456788984 57899
Q ss_pred EEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEE
Q psy731 204 YIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYI 283 (494)
Q Consensus 204 YItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI 283 (494)
|++|+..+.|.|+|++......+-. ......++|+||.. ++++|+
T Consensus 94 y~~d~~~~~I~~~~~dG~~~~~l~~------------------------------~~~~~P~giavdp~-----~g~ly~ 138 (318)
T 3sov_A 94 YWTDSETNRIEVSNLDGSLRKVLFW------------------------------QELDQPRAIALDPS-----SGFMYW 138 (318)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEEC------------------------------SSCSSEEEEEEEGG-----GTEEEE
T ss_pred EEEECCCCEEEEEECCCCcEEEEEe------------------------------CCCCCccEEEEeCC-----CCEEEE
Confidence 9999999999999987544333311 11234678999953 579999
Q ss_pred ecCC-CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeec
Q psy731 284 ADSG-HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTT 362 (494)
Q Consensus 284 ~D~~-~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T 362 (494)
+|.+ .+.|.++++.......+... .+.+ -+|||++|+ .+.|||.--...+++++..
T Consensus 139 td~~~~~~I~r~~~dG~~~~~~~~~----------------~l~~---Pnglavd~~----~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 139 TDWGEVPKIERAGMDGSSRFIIINS----------------EIYW---PNGLTLDYE----EQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECS----------------SCSC---EEEEEEETT----TTEEEEEETTTTEEEEEET
T ss_pred EecCCCCEEEEEEcCCCCeEEEEEC----------------CCCC---ccEEEEecc----CCEEEEEECCCCEEEEEcC
Confidence 9976 57888888875443332211 1122 367999986 3699997766667877754
Q ss_pred hhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecc
Q psy731 363 KVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYP 442 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~p 442 (494)
. .+ ..+.+.+ +......|+++| .+.||.++...++|.++|+.+| +...+|.. .+..|
T Consensus 196 d----G~--------~~~~~~~-~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G-----~~~~~i~~---~~~~P 252 (318)
T 3sov_A 196 D----GT--------NRQAVVK-GSLPHPFALTLF--EDILYWTDWSTHSILACNKYTG-----EGLREIHS---DIFSP 252 (318)
T ss_dssp T----SC--------SCEEEEC-SCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTC-----CSCEEEEC---CCSSC
T ss_pred C----CC--------ceEEEec-CCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCC-----CceEEEeC---CCCCC
Confidence 2 11 1122222 123567899999 5789999999999999999654 23445543 24678
Q ss_pred cceEEcCC
Q psy731 443 SDIRVDRT 450 (494)
Q Consensus 443 d~~~id~~ 450 (494)
.++++.+.
T Consensus 253 ~~i~v~~~ 260 (318)
T 3sov_A 253 MDIHAFSQ 260 (318)
T ss_dssp CCEEEECG
T ss_pred cEEEEecc
Confidence 89988543
No 34
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.13 E-value=1.6e-08 Score=114.26 Aligned_cols=227 Identities=18% Similarity=0.218 Sum_probs=148.4
Q ss_pred CceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcE--EEEEEcCCCccccccCCccceEEEeecCCCCCc
Q psy731 125 NLTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQ--IRFFQLKEKTDYTEESKFSNMVVDVTSANCDNA 201 (494)
Q Consensus 125 ~lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~v--i~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~ 201 (494)
.+.++.++.+|. .++||+.|.+.. +|.++++..... .....+.. .-.....|+||. ...
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~--------~I~~~~l~g~~~~~~~~~vi~~-----~l~~P~GLAvD~-----~~~ 483 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQR--------MICSTQLDRAHGVSSYDTVISR-----DIQAPDGLAVDW-----IHS 483 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTT--------EEEEEEC--------CEEEECS-----SCSCCCEEEEET-----TTT
T ss_pred CCCceEEEeecccCCeeEEeeccce--------eEEEEeccCCCCCcceeEEEec-----CCCCcceeeeee-----cCC
Confidence 456678888886 789999999876 788888875321 11111121 334557899985 467
Q ss_pred EEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEE
Q psy731 202 FLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFL 281 (494)
Q Consensus 202 ~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~ 281 (494)
.+|+||++.+.|.|+|+.......+-. .......+|+||. ..+++
T Consensus 484 ~LY~tD~~~~~I~v~~ldG~~~~~l~~------------------------------~~l~~P~gIaVDp-----~~g~L 528 (791)
T 3m0c_C 484 NIYWTDSVLGTVSVADTKGVKRKTLFR------------------------------ENGSKPRAIVVDP-----VHGFM 528 (791)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEE------------------------------CTTCCEEEEEEET-----TTTEE
T ss_pred cEEEEecCCCeEEEEeCCCCeEEEEEe------------------------------CCCCCcceEEEec-----CCCCE
Confidence 999999999999999997554333311 1123467899995 35899
Q ss_pred EEecCCC-CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEee
Q psy731 282 YIADSGH-NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAV 360 (494)
Q Consensus 282 YI~D~~~-~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V 360 (494)
|++|.+. +.|.+.++.......+.... +.+ -.||||++. .+.|||.-....+++++
T Consensus 529 YwtD~g~~~~I~~~~~dG~~~~~lv~~~----------------l~~---P~GLavD~~----~~~LYwaD~~~~~I~~~ 585 (791)
T 3m0c_C 529 YWTDWGTPAKIKKGGLNGVDIYSLVTEN----------------IQW---PNGITLDLL----SGRLYWVDSKLHSISSI 585 (791)
T ss_dssp EEEECSSSCEEEEEETTSCCEEEEECSS----------------CSC---EEEEEEETT----TTEEEEEETTTTEEEEE
T ss_pred EEecCCCCCeEEEEecCCCceEEEEeCC----------------CCC---ceEEEEecC----CCeEEEEeCCCCcEEEE
Confidence 9999876 77889988766544443321 112 356999876 36999977655566666
Q ss_pred echhhcCCCcCccccccceEEecc-cCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeE
Q psy731 361 TTKVLQNRSLDFSRSNFDFKVMGS-RGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATL 439 (494)
Q Consensus 361 ~T~~L~~~~~~~~~~~~~v~~~G~-~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l 439 (494)
.. +.. ..+.+.. .+..+..-|++++ .+.||+++...++|.+.|..+| ++..+|.. .+
T Consensus 586 d~----dG~--------~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG-----~~~~~l~~---~l 643 (791)
T 3m0c_C 586 DV----NGG--------NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTG-----SDVNLLAE---NL 643 (791)
T ss_dssp ET----TSC--------SCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTC-----CCCEEEEC---SC
T ss_pred ec----CCC--------ceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCC-----cceEEeec---CC
Confidence 53 211 1122222 1223445677776 6799999999999999997654 24455543 36
Q ss_pred ecccceEEcC
Q psy731 440 IYPSDIRVDR 449 (494)
Q Consensus 440 ~~pd~~~id~ 449 (494)
..|.+|.+.+
T Consensus 644 ~~P~~i~v~h 653 (791)
T 3m0c_C 644 LSPEDMVLFH 653 (791)
T ss_dssp SCCCCEEEES
T ss_pred CCceeEeeec
Confidence 7788998854
No 35
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.12 E-value=1.6e-07 Score=91.18 Aligned_cols=302 Identities=10% Similarity=0.076 Sum_probs=180.5
Q ss_pred eeeeeee--CCcEEEEecCCCC-CCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCe-E
Q psy731 65 PVSLDKW--HDRLFLAVPRHKN-GVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDR-L 140 (494)
Q Consensus 65 p~gv~v~--~gRlFvt~PR~~~-gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~-L 140 (494)
|.++++. ++++|++-+.-.. +...++..+..... -.+.-++. . ..+..+.++++++ |
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~---------~~~~~~~~-------~---~~~~~~~~s~dg~~l 103 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL---------EVTQAIHN-------D---LKPFGATINNTTQTL 103 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC---------CEEEEEEE-------S---SCCCSEEEETTTTEE
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC---------eEEEEEec-------C---CCcceEEECCCCCEE
Confidence 5667773 4688888865221 12346666654321 12222221 1 1245677777775 9
Q ss_pred EEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccc--cccCCccceEEEeecCCCCCcEEEEeeCC-CCeEEEEE
Q psy731 141 WALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDY--TEESKFSNMVVDVTSANCDNAFLYIADSG-HNHIVVYN 217 (494)
Q Consensus 141 wvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~--~~~S~l~d~vVD~~~~~c~~~~vYItDs~-~~~iIVyd 217 (494)
|+.+.+.. .|.+||+.++++++++.++..... .......+++++- +..++|+++.+ .+.|.+||
T Consensus 104 ~v~~~~~~--------~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-----dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 104 WFGNTVNS--------AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-----ATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp EEEETTTT--------EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-----TTTEEEEEEESSSCEEEEEE
T ss_pred EEEecCCC--------EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-----CCCEEEEEecCCCceEEEEc
Confidence 99988765 899999999999999988651000 0011245566653 56789999954 56799999
Q ss_pred ccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcC
Q psy731 218 YRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYR 297 (494)
Q Consensus 218 ~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~ 297 (494)
..+++..+.-. ..+.....++++. ++.++|+++. ...|.+||++
T Consensus 171 ~~~~~~~~~~~------------------------------~~~~~~~~~~~s~-----dg~~l~~~~~-~~~i~~~d~~ 214 (353)
T 3vgz_A 171 GGNIKLKTAIQ------------------------------NTGKMSTGLALDS-----EGKRLYTTNA-DGELITIDTA 214 (353)
T ss_dssp TTTTEEEEEEC------------------------------CCCTTCCCCEEET-----TTTEEEEECT-TSEEEEEETT
T ss_pred CCCCceEEEec------------------------------CCCCccceEEECC-----CCCEEEEEcC-CCeEEEEECC
Confidence 99887655410 0011233455542 4578999986 6789999999
Q ss_pred CCcEEEEe-cCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccc
Q psy731 298 TNDSHIIH-HNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSN 376 (494)
Q Consensus 298 ~~~swrv~-~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~ 376 (494)
+++..+.. ..... | .....+|+++|+ ++.||.....+..++.+..+- .. ..
T Consensus 215 ~~~~~~~~~~~~~~--~--------------~~~~~~~~~s~d----g~~l~~~~~~~~~v~~~d~~~---~~-----~~ 266 (353)
T 3vgz_A 215 DNKILSRKKLLDDG--K--------------EHFFINISLDTA----RQRAFITDSKAAEVLVVDTRN---GN-----IL 266 (353)
T ss_dssp TTEEEEEEECCCSS--S--------------CCCEEEEEEETT----TTEEEEEESSSSEEEEEETTT---CC-----EE
T ss_pred CCeEEEEEEcCCCC--C--------------CcccceEEECCC----CCEEEEEeCCCCEEEEEECCC---Cc-----EE
Confidence 88754332 21111 0 012567999987 368888776656777665421 11 11
Q ss_pred cceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCce-EEE
Q psy731 377 FDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGV-LWV 455 (494)
Q Consensus 377 ~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~-Lwv 455 (494)
..+. .+ ...++++++....+|++.-..+.|..||+.+++. ...+.. . ..|.++.++++|. |||
T Consensus 267 ~~~~-~~------~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-----~~~~~~--~--~~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 267 AKVA-AP------ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV-----VKTFDT--P--THPNSLALSADGKTLYV 330 (353)
T ss_dssp EEEE-CS------SCCCEEEETTTTEEEEEETTTTEEEEEETTTTEE-----EEEEEC--C--SEEEEEEECTTSCEEEE
T ss_pred EEEE-cC------CCceEEECCCCCEEEEEECCCCeEEEEECCCCeE-----EEEEec--C--CCCCeEEEcCCCCEEEE
Confidence 1111 11 2356899944445999999999999999987421 122222 1 3688999999985 888
Q ss_pred EecCchhhhcCCCCCCcccEEEEEEec
Q psy731 456 LSNKLPVFLYSKLKPEDINVRIFKSTV 482 (494)
Q Consensus 456 lsnrl~~~~~~~~~~~~~nfrI~r~~~ 482 (494)
...+-.. +-...+-+=.|+|+++
T Consensus 331 ~~~~~~~----~~~~~~~~~~v~~i~l 353 (353)
T 3vgz_A 331 SVKQKST----KQQEATQPDDVIRIAL 353 (353)
T ss_dssp EEECCCB----TTBCCSSCEEEEEEEC
T ss_pred EEccccc----ccccccCCCcEEEEeC
Confidence 7643111 1112233456777653
No 36
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.10 E-value=3.7e-08 Score=102.01 Aligned_cols=225 Identities=18% Similarity=0.227 Sum_probs=148.6
Q ss_pred CceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCc----EEEEEEcCCCccccccCCccceEEEeecCCCC
Q psy731 125 NLTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQM----QIRFFQLKEKTDYTEESKFSNMVVDVTSANCD 199 (494)
Q Consensus 125 ~lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~----vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~ 199 (494)
.+.++.++..|. .++||+.|.... +|.++++.... ... + +.. .-.....++||. .
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~--------~I~~~~~~g~~~~~~~~~-~-~~~-----~~~~p~glavD~-----~ 169 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQR--------MICSTQLDRAHGVSSYDT-V-ISR-----DIQAPDGLAVDW-----I 169 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTT--------EEEEEEC------CCCEE-E-ECS-----SCSCEEEEEEET-----T
T ss_pred ccCcceEEeeeeccCceEEEecCCC--------eEEEEEcccCCCCCcceE-E-EeC-----CCCCcccEEEEe-----c
Confidence 467788999995 789999999887 89999987632 111 1 111 233456788984 4
Q ss_pred CcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCc
Q psy731 200 NAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDA 279 (494)
Q Consensus 200 ~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~ 279 (494)
++.+|++|+..+.|.|+|++......+-. .......+|+||. .++
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~------------------------------~~~~~P~~iavdp-----~~g 214 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFR------------------------------ENGSKPRAIVVDP-----VHG 214 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEE------------------------------CSSCCEEEEEEET-----TTT
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEe------------------------------CCCCCcceEEEec-----ccC
Confidence 78999999999999999997665433311 1123467899995 358
Q ss_pred EEEEecCCC-CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceE
Q psy731 280 FLYIADSGH-NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEF 358 (494)
Q Consensus 280 ~~YI~D~~~-~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly 358 (494)
++|++|.+. +.|.++++.......+.... +.+ -.|||++++ .+.|||.-....+++
T Consensus 215 ~ly~td~~~~~~I~~~~~dG~~~~~~~~~~----------------l~~---P~glavd~~----~~~lY~aD~~~~~I~ 271 (400)
T 3p5b_L 215 FMYWTDWGTPAKIKKGGLNGVDIYSLVTEN----------------IQW---PNGITLDLL----SGRLYWVDSKLHSIS 271 (400)
T ss_dssp EEEEEECSSSCCEEEEETTSCSCEEEECSS----------------CSC---EEEEEEETT----TTEEEEEETTTTEEE
T ss_pred eEEEEeCCCCCEEEEEeCCCCccEEEEECC----------------CCc---eEEEEEEeC----CCEEEEEECCCCEEE
Confidence 999999774 67888888765433332211 112 466999986 369999776666777
Q ss_pred eeechhhcCCCcCccccccceEEecc-cCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCC
Q psy731 359 AVTTKVLQNRSLDFSRSNFDFKVMGS-RGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNA 437 (494)
Q Consensus 359 ~V~T~~L~~~~~~~~~~~~~v~~~G~-~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~ 437 (494)
++... .. ..+.+.+ .+......|++++ .+.||+++...++|.++|..+| +...+|..
T Consensus 272 ~~d~d----G~--------~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G-----~~~~~i~~--- 329 (400)
T 3p5b_L 272 SIDVN----GG--------NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTG-----SDVNLLAE--- 329 (400)
T ss_dssp EEETT----SC--------CCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSC-----CCCEEEEC---
T ss_pred EEeCC----CC--------ccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCC-----CceEEEec---
Confidence 77532 11 1112222 1223456789997 6799999999999999996554 23455543
Q ss_pred eEecccceEEcC
Q psy731 438 TLIYPSDIRVDR 449 (494)
Q Consensus 438 ~l~~pd~~~id~ 449 (494)
.+.-|.++.+-+
T Consensus 330 ~~~~p~~i~v~~ 341 (400)
T 3p5b_L 330 NLLSPEDMVLFH 341 (400)
T ss_dssp SCSCEEEEEEES
T ss_pred CCCCCceEEEEe
Confidence 245688888754
No 37
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.10 E-value=1.5e-08 Score=104.89 Aligned_cols=181 Identities=12% Similarity=0.112 Sum_probs=123.4
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCc----eeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTND----SHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSA 274 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~----~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~ 274 (494)
.++.+|++|...+.|..+++.... ...+- ........+|+||.
T Consensus 122 ~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~------------------------------~~~~~~p~glavD~--- 168 (400)
T 3p5b_L 122 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI------------------------------SRDIQAPDGLAVDW--- 168 (400)
T ss_dssp TTTEEEEEETTTTEEEEEEC------CCCEEEE------------------------------CSSCSCEEEEEEET---
T ss_pred ccCceEEEecCCCeEEEEEcccCCCCCcceEEE------------------------------eCCCCCcccEEEEe---
Confidence 578999999999999999987532 22220 01123457889984
Q ss_pred CCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC
Q psy731 275 NCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS 354 (494)
Q Consensus 275 ~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss 354 (494)
..+.+|++|...+.|.|+++.+...-.+....+ ..-.|||++|. .+.|||.-...
T Consensus 169 --~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~-------------------~~P~~iavdp~----~g~ly~td~~~ 223 (400)
T 3p5b_L 169 --IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG-------------------SKPRAIVVDPV----HGFMYWTDWGT 223 (400)
T ss_dssp --TTTEEEEEETTTTEEEEECTTTCSEEEEEECSS-------------------CCEEEEEEETT----TTEEEEEECSS
T ss_pred --cCCceEEEECCCCeEEEEeCCCCceEEEEeCCC-------------------CCcceEEEecc----cCeEEEEeCCC
Confidence 257899999999999999988665433332111 11357999886 36999976542
Q ss_pred -cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeee
Q psy731 355 -TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVA 433 (494)
Q Consensus 355 -~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~ 433 (494)
.+++++... .+ ..+.+...+ .....|+++|+.+|.||+++...+.|.+.|.++ .+..+++
T Consensus 224 ~~~I~~~~~d----G~--------~~~~~~~~~-l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG------~~~~~~~ 284 (400)
T 3p5b_L 224 PAKIKKGGLN----GV--------DIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG------GNRKTIL 284 (400)
T ss_dssp SCCEEEEETT----SC--------SCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS------CCCEEEE
T ss_pred CCEEEEEeCC----CC--------ccEEEEECC-CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC------CccEEEE
Confidence 466665431 11 122232222 245789999988999999999999999999987 2456777
Q ss_pred ecCCeEecccceEEcCCceEEEEe
Q psy731 434 EDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 434 ~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
.....|.+|.++.++ ++.||++.
T Consensus 285 ~~~~~l~~P~gl~v~-~~~lywtd 307 (400)
T 3p5b_L 285 EDEKRLAHPFSLAVF-EDKVFWTD 307 (400)
T ss_dssp ECSSTTSSEEEEEEE-TTEEEEEE
T ss_pred eCCCCCCCCEEEEEe-CCEEEEec
Confidence 665678999999996 45788875
No 38
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.08 E-value=8.6e-08 Score=93.12 Aligned_cols=243 Identities=13% Similarity=0.047 Sum_probs=151.7
Q ss_pred EeeEEEcCCC-eEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 129 VVKVQSDPCD-RLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 129 V~~i~iD~~~-~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
++.+.+++++ +||+.+.+... .....+|.+||+.++++++++..+. ....+.++- ++.++|+++
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~--~~~~~~v~~~d~~~~~~~~~~~~~~--------~~~~~~~s~-----dg~~l~v~~ 107 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRK--LDKGGVVYRLDPVTLEVTQAIHNDL--------KPFGATINN-----TTQTLWFGN 107 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTT--TEESEEEEEECTTTCCEEEEEEESS--------CCCSEEEET-----TTTEEEEEE
T ss_pred ccceEECCCCCEEEEEcCCCcC--CCCCccEEEEcCCCCeEEEEEecCC--------CcceEEECC-----CCCEEEEEe
Confidence 4567777765 78888876431 1113389999999999999888655 245666653 567899999
Q ss_pred CCCCeEEEEEccCCceeE-EecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 208 SGHNHIVVYNYRTNDSHI-IHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~r-v~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
...+.|.+||..+++..+ +..+.. ..| + .........++++. ++.++|+++.
T Consensus 108 ~~~~~v~~~d~~~~~~~~~~~~~~~-~~~--------------------~-~~~~~~~~~~~~s~-----dg~~l~~~~~ 160 (353)
T 3vgz_A 108 TVNSAVTAIDAKTGEVKGRLVLDDR-KRT--------------------E-EVRPLQPRELVADD-----ATNTVYISGI 160 (353)
T ss_dssp TTTTEEEEEETTTCCEEEEEESCCC-CCC--------------------S-SCCCCEEEEEEEET-----TTTEEEEEEE
T ss_pred cCCCEEEEEeCCCCeeEEEEecCCC-ccc--------------------c-ccCCCCCceEEECC-----CCCEEEEEec
Confidence 999999999999998744 321100 000 0 00011234566653 3578999985
Q ss_pred C-CCeEEEEEcCCCcEEEEec-CCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechh
Q psy731 287 G-HNHIVVYNYRTNDSHIIHH-NYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKV 364 (494)
Q Consensus 287 ~-~~gliVydl~~~~swrv~~-~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~ 364 (494)
. ...|.+||.++++.-+... .. ....+++++|+ ++.||+....+ .++.+..+-
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~~~~--------------------~~~~~~~~s~d----g~~l~~~~~~~-~i~~~d~~~ 215 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQNTG--------------------KMSTGLALDSE----GKRLYTTNADG-ELITIDTAD 215 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEECCCC--------------------TTCCCCEEETT----TTEEEEECTTS-EEEEEETTT
T ss_pred CCCceEEEEcCCCCceEEEecCCC--------------------CccceEEECCC----CCEEEEEcCCC-eEEEEECCC
Confidence 4 5669999999887544322 11 12456899987 36888876543 565554321
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccc
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSD 444 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~ 444 (494)
.. ....+. .+..|+.....++++++..+.||++....+.|.+||+.+++. ...+.. .-|.+
T Consensus 216 ---~~-----~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-----~~~~~~-----~~~~~ 276 (353)
T 3vgz_A 216 ---NK-----ILSRKK-LLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI-----LAKVAA-----PESLA 276 (353)
T ss_dssp ---TE-----EEEEEE-CCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE-----EEEEEC-----SSCCC
T ss_pred ---Ce-----EEEEEE-cCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-----EEEEEc-----CCCce
Confidence 11 111111 223333344567899955557999998889999999987422 122222 22567
Q ss_pred eEEcCCce-EEEEe
Q psy731 445 IRVDRTGV-LWVLS 457 (494)
Q Consensus 445 ~~id~~g~-Lwvls 457 (494)
+.++++|. ||+..
T Consensus 277 ~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 277 VLFNPARNEAYVTH 290 (353)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEE
Confidence 88888875 88876
No 39
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.03 E-value=2.5e-08 Score=100.43 Aligned_cols=178 Identities=16% Similarity=0.139 Sum_probs=122.6
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCce--eEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTNDS--HIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANC 276 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~~--~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c 276 (494)
.++.+|++|...+.|.++++..+.. +.+. .......+|++|-
T Consensus 45 ~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~-------------------------------~~l~~p~glavd~----- 88 (318)
T 3sov_A 45 SHGLIYWSDVSEEAIKRTEFNKTESVQNVVV-------------------------------SGLLSPDGLACDW----- 88 (318)
T ss_dssp GGTEEEEEETTTTEEEEEETTSSSCCCEEEE-------------------------------ECCSCCCEEEEET-----
T ss_pred CCCEEEEEECCCCcEEEEEccCCCceEEEEc-------------------------------CCCCCccEEEEEc-----
Confidence 5789999999999999999877642 1121 1112356788984
Q ss_pred CCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC-Cc
Q psy731 277 DDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA-ST 355 (494)
Q Consensus 277 ~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls-s~ 355 (494)
.++.+|++|.....|.|+++.+.....+....+ ..-.|||++|. .+.||+.-.. ..
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~-------------------~~P~giavdp~----~g~ly~td~~~~~ 145 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL-------------------DQPRAIALDPS----SGFMYWTDWGEVP 145 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSC-------------------SSEEEEEEEGG----GTEEEEEECSSSC
T ss_pred CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCC-------------------CCccEEEEeCC----CCEEEEEecCCCC
Confidence 357899999999999999988654322221110 11357999886 3699997654 45
Q ss_pred ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeec
Q psy731 356 TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAED 435 (494)
Q Consensus 356 ~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d 435 (494)
+++++... .+ ..+.+.+.+ ...+.|+++|+.+|.||+++...+.|.++|.++ .+..+++.
T Consensus 146 ~I~r~~~d----G~--------~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG------~~~~~~~~- 205 (318)
T 3sov_A 146 KIERAGMD----GS--------SRFIIINSE-IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG------TNRQAVVK- 205 (318)
T ss_dssp EEEEEETT----SC--------SCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS------CSCEEEEC-
T ss_pred EEEEEEcC----CC--------CeEEEEECC-CCCccEEEEeccCCEEEEEECCCCEEEEEcCCC------CceEEEec-
Confidence 77777432 11 112232222 245689999977999999999999999999987 24456654
Q ss_pred CCeEecccceEEcCCceEEEEe
Q psy731 436 NATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 436 ~~~l~~pd~~~id~~g~Lwvls 457 (494)
..+.+|.|+.++. +.||++.
T Consensus 206 -~~~~~P~glav~~-~~lywtd 225 (318)
T 3sov_A 206 -GSLPHPFALTLFE-DILYWTD 225 (318)
T ss_dssp -SCCSCEEEEEEET-TEEEEEE
T ss_pred -CCCCCceEEEEeC-CEEEEEe
Confidence 4578999999985 4677774
No 40
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.03 E-value=2.2e-08 Score=99.27 Aligned_cols=223 Identities=12% Similarity=0.092 Sum_probs=132.9
Q ss_pred CCceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCc-EEEEEEcCCCcc--ccccCCccceEEEeecCCCCC
Q psy731 124 RNLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQM-QIRFFQLKEKTD--YTEESKFSNMVVDVTSANCDN 200 (494)
Q Consensus 124 ~~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~-vi~~~~lp~~~~--~~~~S~l~d~vVD~~~~~c~~ 200 (494)
..+.++.++.+|++++|||.|.+.. +|.+||+.... .++++.-+...- ...-....++++|- .+
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~--------~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~-----~~ 154 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALH--------QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEP-----ST 154 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTT--------EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECT-----TT
T ss_pred CccCCceEEEECCCCCEEEEECCCC--------EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeC-----CC
Confidence 3567899999999999999999887 89999986653 444442211000 01122456677762 37
Q ss_pred cEEEEeeC-CCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCc
Q psy731 201 AFLYIADS-GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDA 279 (494)
Q Consensus 201 ~~vYItDs-~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~ 279 (494)
+.+||+|+ +.+.|.+||.+....+.+........| ....-.....|++|. +.+
T Consensus 155 g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~---------------------~~~~~~~p~gia~d~-----~~g 208 (329)
T 3fvz_A 155 GAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSP---------------------RPGQFSVPHSLALVP-----HLD 208 (329)
T ss_dssp CCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSC---------------------CTTEESCEEEEEEET-----TTT
T ss_pred CeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCC---------------------CCcccCCCcEEEEEC-----CCC
Confidence 89999998 789999999544434444211100000 000112357788884 247
Q ss_pred EEEEecCCCCeEEEEEcCCCcEEEE-ecCCcccCCCCcceEEcCEEeeeecceeeeeecc------CCCCCceeEEEeeC
Q psy731 280 FLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSP------LTRDNFRVMYFHPL 352 (494)
Q Consensus 280 ~~YI~D~~~~gliVydl~~~~swrv-~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp------~~~~g~r~LYf~pl 352 (494)
.+|++|...+.|.+||..+++.-+. ...... .++.+++.+| + | .+|..-.
T Consensus 209 ~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~------------------~~~~~~~~~pg~~~~~~---g--~~~v~~~ 265 (329)
T 3fvz_A 209 QLCVADRENGRIQCFKTDTKEFVREIKHASFG------------------RNVFAISYIPGFLFAVN---G--KPYFGDQ 265 (329)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECCTTTT------------------TCEEEEEEETTEEEEEE---C--CCCTTCS
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEEeccccC------------------CCcceeeecCCEEEEeC---C--CEEeccC
Confidence 8999999999999999986654332 222111 1123344443 2 1 2333322
Q ss_pred CCcceEeeechhhcCCCcCccccccceEEecc-cCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 353 ASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGS-RGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 353 ss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~-~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
...+.+.+..+ +. +.++.++. .+......++++| .+|.||+++...+.|.+|+.++
T Consensus 266 ~~~~v~~~~~~---~g--------~~~~~~~~~~~~~~~p~~ia~~-~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 266 EPVQGFVMNFS---SG--------EIIDVFKPVRKHFDMPHDIVAS-EDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCCEEEEETT---TC--------CEEEEECCSSSCCSSEEEEEEC-TTSEEEEEESSSCCEEEEEEEE
T ss_pred CCcEEEEEEcC---CC--------eEEEEEcCCCCccCCeeEEEEC-CCCCEEEEECCCCEEEEEeCCc
Confidence 33334333221 11 11222321 2223446799999 7899999999999999999876
No 41
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.02 E-value=3.6e-09 Score=117.62 Aligned_cols=213 Identities=12% Similarity=0.100 Sum_probs=135.3
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPL 236 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~ 236 (494)
.|.++++.+.++... .........+++|. .++.+|++|.....|.++++........ . .
T Consensus 387 ~I~~id~~~~~~~~~--------~~~~~~p~gla~d~-----~~~~Ly~sD~~~~~I~~~~~~g~~~~~~-~--~----- 445 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSL--------IPNLRNVVALDTEV-----ASNRIYWSDLSQRMICSTQLDRAHGVSS-Y--D----- 445 (699)
T ss_dssp C-CEECTTSCCEECC--------SCCCTTCCCCEEET-----TTTEEEECCTTTTSBEEEESCCCCC-CC-C--C-----
T ss_pred ceEEEeCCCCcceee--------eccCcceEEEcccc-----ccCeEEEEecCCCeEEEEecCCCCCCcc-e--E-----
Confidence 455666666554431 11223445666764 5789999999999999999875210000 0 0
Q ss_pred CCccccCCccceeeeeccccccc-ccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCC
Q psy731 237 FGDFTIGGEYSEFFQLKEKTDYT-EESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLF 315 (494)
Q Consensus 237 ~~~f~i~g~~~~~f~l~~~~~~~-~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~ 315 (494)
.++. .......|+||.. .+.+|++|.....|.|+++.+.....+....+.
T Consensus 446 -------------------~~i~~~~~~P~glavD~~-----~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~----- 496 (699)
T 1n7d_A 446 -------------------TVISRDIQAPDGLAVDWI-----HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGS----- 496 (699)
T ss_dssp -------------------CBCCSCC--CCCEECCCS-----SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSC-----
T ss_pred -------------------EEEeCCCCCcceEEEEee-----CCcEEEEeccCCeEEEEecCCCceEEEEeCCCC-----
Confidence 0111 1123456788742 467999999999999999987654444322111
Q ss_pred cceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC-cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeE
Q psy731 316 GDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS-TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGAS 394 (494)
Q Consensus 316 ~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss-~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~ 394 (494)
.-.|||++|. .++|||.-... .+++++... .+ ..+.+...+ .....|+
T Consensus 497 --------------~P~giavDp~----~g~ly~td~~~~~~I~~~~~d----G~--------~~~~l~~~~-l~~PnGl 545 (699)
T 1n7d_A 497 --------------KPRAIVVDPV----HGFMYWTDWGTPAKIKKGGLN----GV--------DIYSLVTEN-IQWPNGI 545 (699)
T ss_dssp --------------CCCCEECCSS----SSCCEECCCSSSCCEEBCCSS----SC--------CCCEESCSS-CSSCCCE
T ss_pred --------------CcceEEEccC----CCcEEEcccCCCCeEEEEeCC----CC--------CeeEEEeCC-CCCccEE
Confidence 1346999986 36999976543 356555321 11 111222211 2457899
Q ss_pred EeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 395 SLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 395 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
++|+..|.||+++...+.|.+++.++ .+..+++.....+.+|.+|.++.+ .||++.
T Consensus 546 avd~~~~~LY~aD~~~~~I~~~d~dG------~~~~~~~~~~~~~~~P~glavd~~-~lywtd 601 (699)
T 1n7d_A 546 TLDLLSGRLYWVDSKLHSISSIDVNG------GNRKTILEDEKRLAHPFSLAVFED-KVFWTD 601 (699)
T ss_dssp EECTTTCCEEEEETTTTEEEEECSSS------SCCEEECCCSSSCSSCCCCEEETT-EEEEEC
T ss_pred EEeccCCEEEEEecCCCeEEEEccCC------CceEEEEecCCcCCCceEeEEECC-EEEEEe
Confidence 99988899999999999999999987 245666655567899999999875 788775
No 42
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.02 E-value=7.1e-08 Score=90.93 Aligned_cols=238 Identities=13% Similarity=0.159 Sum_probs=152.1
Q ss_pred eeeeeee-eCCcEEE-EecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCeEE
Q psy731 64 LPVSLDK-WHDRLFL-AVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDRLW 141 (494)
Q Consensus 64 ~p~gv~v-~~gRlFv-t~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~Lw 141 (494)
-|.++.+ .+|++|+ +-.. -..|..+.... .....++. .++..+.++.+|++++||
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~----------~~~~~~~~--------~~~~~p~~i~~~~~g~l~ 81 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGM-----YGRVVKLATGS----------TGTTVLPF--------NGLYQPQGLAVDGAGTVY 81 (270)
T ss_dssp CEEEEEECTTCCEEEEECSS-----SCEEEEECC---------------EECCC--------CSCCSCCCEEECTTCCEE
T ss_pred CccceEECCCCCEEEEccCC-----CCcEEEecCCC----------cccceEee--------CCcCCcceeEECCCCCEE
Confidence 7889988 5789999 5321 12455554321 22222321 234557788999999999
Q ss_pred EEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCC
Q psy731 142 ALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTN 221 (494)
Q Consensus 142 vlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~ 221 (494)
|.|. .. .|.+||..+..+.. +... .......+++| .++.+|++|...+.|.+||..+.
T Consensus 82 v~~~-~~--------~i~~~d~~~~~~~~-~~~~------~~~~p~~i~~~------~~g~l~v~~~~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 82 VTDF-NN--------RVVTLAAGSNNQTV-LPFD------GLNYPEGLAVD------TQGAVYVADRGNNRVVKLAAGSK 139 (270)
T ss_dssp EEET-TT--------EEEEECTTCSCCEE-CCCC------SCSSEEEEEEC------TTCCEEEEEGGGTEEEEECTTCC
T ss_pred EEcC-CC--------EEEEEeCCCceEee-eecC------CcCCCcceEEC------CCCCEEEEECCCCEEEEEECCCc
Confidence 9998 33 79999988765432 2211 22456677776 34569999999999999976554
Q ss_pred ceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcE
Q psy731 222 DSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDS 301 (494)
Q Consensus 222 ~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~s 301 (494)
....... ........|++|. ++.+|++|.....|.+||..++..
T Consensus 140 ~~~~~~~------------------------------~~~~~p~~i~~~~------~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 140 TQTVLPF------------------------------TGLNDPDGVAVDN------SGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp SCEECCC------------------------------CSCCSCCCEEECT------TCCEEEEEGGGTEEEEECTTTCCE
T ss_pred eeEeecc------------------------------ccCCCceeEEEeC------CCCEEEEECCCCEEEEEecCCCce
Confidence 4332210 0112346677773 245999998889999999887765
Q ss_pred EEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEE
Q psy731 302 HIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKV 381 (494)
Q Consensus 302 wrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~ 381 (494)
.......+ ....+|+++++ | .||+....+..++.+..+- .. ...
T Consensus 184 ~~~~~~~~-------------------~~p~~i~~d~~---g--~l~v~~~~~~~v~~~~~~~----~~--------~~~ 227 (270)
T 1rwi_B 184 VVLPFTDI-------------------TAPWGIAVDEA---G--TVYVTEHNTNQVVKLLAGS----TT--------STV 227 (270)
T ss_dssp EECCCSSC-------------------CSEEEEEECTT---C--CEEEEETTTSCEEEECTTC----SC--------CEE
T ss_pred EeecccCC-------------------CCceEEEECCC---C--CEEEEECCCCcEEEEcCCC----Cc--------cee
Confidence 43211110 23567999875 2 8999887666777775421 10 011
Q ss_pred ecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 382 MGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 382 ~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
....| .....++++| .+|+||+++...+.|.+++...
T Consensus 228 ~~~~~-~~~p~~i~~~-~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 228 LPFTG-LNTPLAVAVD-SDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CCCCS-CSCEEEEEEC-TTCCEEEEEGGGTEEEEECCCG
T ss_pred eccCC-CCCceeEEEC-CCCCEEEEECCCCEEEEEcCCC
Confidence 11111 1345789999 7899999999999999999876
No 43
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.02 E-value=3e-08 Score=102.84 Aligned_cols=187 Identities=13% Similarity=0.068 Sum_probs=121.8
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDD 278 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~ 278 (494)
.++.+|++|...+.|.++|++++...++... ..... ++++. ++
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-------------------------------~~~~~-ia~~~-----~g 182 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-------------------------------FKGGK-PAVTK-----DK 182 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEET-------------------------------CCBCB-CEECT-----TS
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeecc-------------------------------CCCCc-eeEec-----CC
Confidence 3566999999999999999999988777210 11122 56653 35
Q ss_pred cEEEEecCCCC-eEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcce
Q psy731 279 AFLYIADSGHN-HIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTE 357 (494)
Q Consensus 279 ~~~YI~D~~~~-gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~l 357 (494)
.++|++|.... .|.++|..++...+.... ..+. ...+..+||++|+ +..||+.-. ..++
T Consensus 183 ~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~-~~~~--------------~~~~p~~iav~p~----~g~lyv~d~-~~~I 242 (409)
T 3hrp_A 183 QRVYSIGWEGTHTVYVYMKASGWAPTRIGQ-LGST--------------FSGKIGAVALDET----EEWLYFVDS-NKNF 242 (409)
T ss_dssp SEEEEEBSSTTCEEEEEEGGGTTCEEEEEE-CCTT--------------SCSCCCBCEECTT----SSEEEEECT-TCEE
T ss_pred CcEEEEecCCCceEEEEEcCCCceeEEeee-ccch--------------hcCCcEEEEEeCC----CCeEEEEEC-CCcE
Confidence 68999998665 899999887765433210 0000 0123567999985 258999544 4478
Q ss_pred EeeechhhcCCCcCccccccceEEecccCCCCCC-C-eEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeec
Q psy731 358 FAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQS-G-ASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAED 435 (494)
Q Consensus 358 y~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs-~-g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d 435 (494)
+++..+-- .. ..+...+..|..... . ++++|+..|.||+++...+.|.+|+.++ . ..+++-.
T Consensus 243 ~~~d~~~~---~~------~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-----~~~~~g~ 306 (409)
T 3hrp_A 243 GRFNVKTQ---EV------TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG--E-----CEWFCGS 306 (409)
T ss_dssp EEEETTTC---CE------EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC--C-----EEEEEEC
T ss_pred EEEECCCC---CE------EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC--C-----EEEEEeC
Confidence 88764311 10 111111111111111 2 9999966899999999999999999987 2 2333322
Q ss_pred C------------CeEecccceEEcCCceEEEEec
Q psy731 436 N------------ATLIYPSDIRVDRTGVLWVLSN 458 (494)
Q Consensus 436 ~------------~~l~~pd~~~id~~g~Lwvlsn 458 (494)
. .+|.+|.++.+|++|.|||.-.
T Consensus 307 ~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 307 ATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp TTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred CCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 1 3488999999999999999854
No 44
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.00 E-value=3.9e-08 Score=111.10 Aligned_cols=182 Identities=12% Similarity=0.114 Sum_probs=123.9
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCc----eeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTND----SHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSA 274 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~----~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~ 274 (494)
.++.+|+||...+.|.++++.... ...+- ........+|+||-.
T Consensus 434 ~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi------------------------------~~~l~~P~GLAvD~~-- 481 (791)
T 3m0c_C 434 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI------------------------------SRDIQAPDGLAVDWI-- 481 (791)
T ss_dssp TTTEEEEEETTTTEEEEEEC--------CEEEE------------------------------CSSCSCCCEEEEETT--
T ss_pred cCCeeEEeeccceeEEEEeccCCCCCcceeEEE------------------------------ecCCCCcceeeeeec--
Confidence 578999999999999999987532 11220 011234578999953
Q ss_pred CCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC
Q psy731 275 NCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS 354 (494)
Q Consensus 275 ~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss 354 (494)
.+.+|++|...+.|.|+++.+.....+....+. .-.||||+|. .+.|||.-...
T Consensus 482 ---~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~-------------------~P~gIaVDp~----~g~LYwtD~g~ 535 (791)
T 3m0c_C 482 ---HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-------------------KPRAIVVDPV----HGFMYWTDWGT 535 (791)
T ss_dssp ---TTEEEEEETTTTEEEEEETTSSSEEEEEECTTC-------------------CEEEEEEETT----TTEEEEEECSS
T ss_pred ---CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC-------------------CcceEEEecC----CCCEEEecCCC
Confidence 568999999999999999986654333322111 1457999986 36999987544
Q ss_pred -cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeee
Q psy731 355 -TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVA 433 (494)
Q Consensus 355 -~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~ 433 (494)
.+++++.. +.+ ..+.+...+ .....|+++|+.+|.||+++...+.|.+.+.++ .+..+++
T Consensus 536 ~~~I~~~~~----dG~--------~~~~lv~~~-l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG------~~~~~v~ 596 (791)
T 3m0c_C 536 PAKIKKGGL----NGV--------DIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG------GNRKTIL 596 (791)
T ss_dssp SCEEEEEET----TSC--------CEEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS------CSCEEEE
T ss_pred CCeEEEEec----CCC--------ceEEEEeCC-CCCceEEEEecCCCeEEEEeCCCCcEEEEecCC------CceEEEe
Confidence 35555432 111 222333322 245789999988999999999999999999988 2456666
Q ss_pred ecCCeEecccceEEcCCceEEEEec
Q psy731 434 EDNATLIYPSDIRVDRTGVLWVLSN 458 (494)
Q Consensus 434 ~d~~~l~~pd~~~id~~g~Lwvlsn 458 (494)
.....|..|-+|.++ +++||++-.
T Consensus 597 ~~~~~l~~P~glav~-~~~lYwtD~ 620 (791)
T 3m0c_C 597 EDEKRLAHPFSLAVF-EDKVFWTDI 620 (791)
T ss_dssp ECTTTTSSEEEEEEE-TTEEEEEET
T ss_pred cCCCccCCCCEEEEe-CCEEEEEEC
Confidence 655677889999985 458999853
No 45
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.00 E-value=1.6e-07 Score=93.38 Aligned_cols=235 Identities=12% Similarity=0.009 Sum_probs=143.2
Q ss_pred eEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEE
Q psy731 127 TSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYI 205 (494)
Q Consensus 127 vsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYI 205 (494)
.-..++..|+ .++||++|.... +|.+||+.++++. .+.++. ....+..+ .++.+||
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~--------~i~~~d~~~~~~~-~~~~~~--------~v~~i~~~------~dg~l~v 105 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILER--------ELHELHLASGRKT-VHALPF--------MGSALAKI------SDSKQLI 105 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGT--------EEEEEETTTTEEE-EEECSS--------CEEEEEEE------ETTEEEE
T ss_pred CCCcCCeEeCCCCEEEEEECCCC--------EEEEEECCCCcEE-EEECCC--------cceEEEEe------CCCeEEE
Confidence 3445667776 478999998755 8999999988754 455443 34455554 2456777
Q ss_pred eeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEec
Q psy731 206 ADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIAD 285 (494)
Q Consensus 206 tDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D 285 (494)
+. ..+|.+||.++++..++..... ......++++++|. ++.+|+++
T Consensus 106 ~~--~~gl~~~d~~~g~~~~~~~~~~--------------------------~~~~~~~~~i~~d~------~G~l~v~~ 151 (326)
T 2ghs_A 106 AS--DDGLFLRDTATGVLTLHAELES--------------------------DLPGNRSNDGRMHP------SGALWIGT 151 (326)
T ss_dssp EE--TTEEEEEETTTCCEEEEECSST--------------------------TCTTEEEEEEEECT------TSCEEEEE
T ss_pred EE--CCCEEEEECCCCcEEEEeeCCC--------------------------CCCCCCCCCEEECC------CCCEEEEe
Confidence 76 3579999999998766622100 01123466777774 23467876
Q ss_pred CC------CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEe
Q psy731 286 SG------HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFA 359 (494)
Q Consensus 286 ~~------~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~ 359 (494)
.. ..+|.++| +++..++... .....||+++|+ ++.||+.--....++.
T Consensus 152 ~~~~~~~~~~~l~~~~--~g~~~~~~~~--------------------~~~~~~i~~s~d----g~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 152 MGRKAETGAGSIYHVA--KGKVTKLFAD--------------------ISIPNSICFSPD----GTTGYFVDTKVNRLMR 205 (326)
T ss_dssp EETTCCTTCEEEEEEE--TTEEEEEEEE--------------------ESSEEEEEECTT----SCEEEEEETTTCEEEE
T ss_pred CCCcCCCCceEEEEEe--CCcEEEeeCC--------------------CcccCCeEEcCC----CCEEEEEECCCCEEEE
Confidence 53 35677777 3432222110 112568999987 3789997655557777
Q ss_pred eechhhcCC-CcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCe
Q psy731 360 VTTKVLQNR-SLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNAT 438 (494)
Q Consensus 360 V~T~~L~~~-~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~ 438 (494)
+..+. .+. .+.. ...+..+... ....+|+++| ++|+||++....+.|.+||+++ .. +..+... .
T Consensus 206 ~d~~~-~~Gl~~~~---~~~~~~~~~~--~~~p~gi~~d-~~G~lwva~~~~~~v~~~d~~g--~~----~~~i~~~-~- 270 (326)
T 2ghs_A 206 VPLDA-RTGLPTGK---AEVFIDSTGI--KGGMDGSVCD-AEGHIWNARWGEGAVDRYDTDG--NH----IARYEVP-G- 270 (326)
T ss_dssp EEBCT-TTCCBSSC---CEEEEECTTS--SSEEEEEEEC-TTSCEEEEEETTTEEEEECTTC--CE----EEEEECS-C-
T ss_pred EEccc-ccCCcccC---ceEEEECCCC--CCCCCeeEEC-CCCCEEEEEeCCCEEEEECCCC--CE----EEEEECC-C-
Confidence 75420 011 1110 0112222111 1345799999 8999999998889999999966 21 2333221 1
Q ss_pred EecccceEEc-CC-ceEEEEecCc
Q psy731 439 LIYPSDIRVD-RT-GVLWVLSNKL 460 (494)
Q Consensus 439 l~~pd~~~id-~~-g~Lwvlsnrl 460 (494)
..|.++.++ ++ +.|||.+++-
T Consensus 271 -~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 271 -KQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp -SBEEEEEEESTTSCEEEEEEBCT
T ss_pred -CCcEEEEEecCCCCEEEEEecCC
Confidence 357888886 55 4799998664
No 46
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.97 E-value=2.4e-07 Score=101.88 Aligned_cols=221 Identities=15% Similarity=0.162 Sum_probs=151.8
Q ss_pred CceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 125 NLTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 125 ~lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
++.++.++..|. .++||+.|.+.. +|.++++....+...+. . +-.....++||. ..+.+
T Consensus 35 ~~~~~~~l~~d~~~~~lywtD~~~~--------~I~r~~~~g~~~~~v~~--~-----g~~~P~GlAvD~-----~~~~L 94 (628)
T 4a0p_A 35 GVKEASALDFDVTDNRIYWTDISLK--------TISRAFMNGSALEHVVE--F-----GLDYPEGMAVDW-----LGKNL 94 (628)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTT--------EEEEEETTSCSCEEEEC--S-----SCSCCCEEEEET-----TTTEE
T ss_pred CCCceEEEEEECCCCEEEEEECCCC--------eEEEEECCCCCcEEEEe--C-----CCCCcceEEEEe-----CCCEE
Confidence 467889999995 789999999876 89999998765433221 1 223467899985 57899
Q ss_pred EEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEE
Q psy731 204 YIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYI 283 (494)
Q Consensus 204 YItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI 283 (494)
|+||+..+.|.|.|++......+-. .......+|+||. .++++|+
T Consensus 95 Y~tD~~~~~I~v~~~dG~~~~~l~~------------------------------~~l~~P~~iavdp-----~~G~lY~ 139 (628)
T 4a0p_A 95 YWADTGTNRIEVSKLDGQHRQVLVW------------------------------KDLDSPRALALDP-----AEGFMYW 139 (628)
T ss_dssp EEEETTTTEEEEEETTSTTCEEEEC------------------------------SSCCCEEEEEEET-----TTTEEEE
T ss_pred EEEECCCCEEEEEecCCCcEEEEEe------------------------------CCCCCcccEEEcc-----CCCeEEE
Confidence 9999999999999997554322211 1123468899995 3589999
Q ss_pred ecCC-CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeec
Q psy731 284 ADSG-HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTT 362 (494)
Q Consensus 284 ~D~~-~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T 362 (494)
+|.+ .+.|.+.++.....-.+.. .+.+ -+||||+++ .+.||+.-....+++++..
T Consensus 140 tD~g~~~~I~r~~~dG~~~~~l~~-----------------~~~~---P~GlalD~~----~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 140 TEWGGKPKIDRAAMDGSERTTLVP-----------------NVGR---ANGLTIDYA----KRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp EECSSSCEEEEEETTSCSCEEEEC-----------------SCSS---EEEEEEETT----TTEEEEEETTTTEEEEEET
T ss_pred eCCCCCCEEEEEeCCCCceEEEEC-----------------CCCC---cceEEEccc----cCEEEEEECCCCEEEEEcC
Confidence 9976 5678888877554332221 1222 356999886 3699998777767777764
Q ss_pred hhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecc
Q psy731 363 KVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYP 442 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~p 442 (494)
. .. ..+.+.+. .....|+++| + |.||+++...++|.+.|..+| ++..++.. .+.+|
T Consensus 196 d----G~--------~~~v~~~~--l~~P~glav~-~-~~ly~tD~~~~~I~~~dk~tg-----~~~~~l~~---~~~~p 251 (628)
T 4a0p_A 196 L----GL--------NREVIADD--LPHPFGLTQY-Q-DYIYWTDWSRRSIERANKTSG-----QNRTIIQG---HLDYV 251 (628)
T ss_dssp T----SC--------SCEEEEEC--CSCEEEEEEE-T-TEEEEEETTTTEEEEEETTTC-----CSCEEEEC---SCCSC
T ss_pred C----CC--------ceEEeecc--CCCceEEEEE-C-CEEEEecCCCCEEEEEECCCC-----CceEEEec---CCCCc
Confidence 2 11 11223332 2456799999 4 899999999999999997654 24455543 24577
Q ss_pred cceEEc
Q psy731 443 SDIRVD 448 (494)
Q Consensus 443 d~~~id 448 (494)
-++++-
T Consensus 252 ~~i~v~ 257 (628)
T 4a0p_A 252 MDILVF 257 (628)
T ss_dssp CEEEEE
T ss_pred ceeeee
Confidence 787763
No 47
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.92 E-value=3.4e-07 Score=93.56 Aligned_cols=279 Identities=11% Similarity=0.028 Sum_probs=165.4
Q ss_pred cCCCeeeeeeee--CCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEE---
Q psy731 60 AENCLPVSLDKW--HDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQS--- 134 (494)
Q Consensus 60 p~~~~p~gv~v~--~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~i--- 134 (494)
..+..|.++..+ ++|++++- +.. .++..+..+.+ . --.+ -+|.... +-+..+.+.++.+
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~--l~~---g~V~~~~~~~~----~---~~~~-~~~~~s~---~g~~~~~~sGl~~~~~ 73 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSN--LYK---GRIEVYNPKTQ----S---HFNV-VIDGASS---NGDGEQQMSGLSLLTH 73 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEE--TTT---TEEEEECTTTC----C---EEEE-CCTTTCC---SSCCSEEEEEEEESSS
T ss_pred CcccCCcCccCcCCCCEEEEEe--ccC---CEEEEEcCCCC----e---EEEE-ecCCccc---cCCCcceeeEEEEecc
Confidence 467788888875 48998887 433 46777765322 0 0112 3554321 1234577899999
Q ss_pred cCCCeEEE-EeCCCCC----CCCCCCCEEEEEECC---CCcEEEEEEcCCCcccc--------ccCCccceEEEeecCCC
Q psy731 135 DPCDRLWA-LDSGVVE----GKMEQPPSVQVYDLR---QQMQIRFFQLKEKTDYT--------EESKFSNMVVDVTSANC 198 (494)
Q Consensus 135 D~~~~Lwv-lD~G~~~----~~~~~~Pklv~~dl~---t~~vi~~~~lp~~~~~~--------~~S~l~d~vVD~~~~~c 198 (494)
|+.+|||| .|.|..- ....+...|++||++ |++++....|+. +.. .-...||++||
T Consensus 74 D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~--~~~~~~~~~g~~~~~~nDvavD------ 145 (334)
T 2p9w_A 74 DNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEK--VQDEFEKKAGKRPFGVVQSAQD------ 145 (334)
T ss_dssp SSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHH--HHHHHHHHHSSCCEEEEEEEEC------
T ss_pred CCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcc--ccccccccccccccCCceeEEC------
Confidence 78899999 6754332 123456789999999 999988888865 111 11234555554
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDD 278 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~ 278 (494)
.++.+
T Consensus 146 ~~Gna--------------------------------------------------------------------------- 150 (334)
T 2p9w_A 146 RDGNS--------------------------------------------------------------------------- 150 (334)
T ss_dssp TTSCE---------------------------------------------------------------------------
T ss_pred CCCCE---------------------------------------------------------------------------
Confidence 24444
Q ss_pred cEEEEecCCC-CeEEEEEcCCCc--EEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc
Q psy731 279 AFLYIADSGH-NHIVVYNYRTND--SHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST 355 (494)
Q Consensus 279 ~~~YI~D~~~-~gliVydl~~~~--swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~ 355 (494)
||+|+.. +.|+.+|-.... .|-... |... -..|.+||+..|+ ++.|+.+-- +.
T Consensus 151 ---YVt~s~~~~~I~rV~pdG~~~~~~~~~~------~~~~----------~~~G~nGIv~~pd----g~~Liv~~~-~g 206 (334)
T 2p9w_A 151 ---YVAFALGMPAIARVSADGKTVSTFAWES------GNGG----------QRPGYSGITFDPH----SNKLIAFGG-PR 206 (334)
T ss_dssp ---EEEEEESSCEEEEECTTSCCEEEEEECC------CCSS----------SCCSCSEEEEETT----TTEEEEESS-SS
T ss_pred ---EEeCCCCCCeEEEEeCCCCEEeeeeecC------CCcc----------cccCcceEEEeCC----CCEEEEEcC-CC
Confidence 4444444 444444444331 121111 1000 1357899999987 357777655 66
Q ss_pred ceEeeechhhcCCCcCccccccceEEe--cccCCCCCCCeE-EeeCCCCeE-EEeccCCCeEEEEeCCCCccccccceee
Q psy731 356 TEFAVTTKVLQNRSLDFSRSNFDFKVM--GSRGTGSQSGAS-SLDEETGVI-FYALLVKSGVGCWNTFRGEEYNEKSMGL 431 (494)
Q Consensus 356 ~ly~V~T~~L~~~~~~~~~~~~~v~~~--G~~G~~~qs~g~-~~D~~~G~l-y~~~~~~~aI~~w~~~~~~~~~~~~~~~ 431 (494)
++|++..+ .+. ...+..- |..|...-.+|+ ..+ .+|.+ ++++-..+++...+.++ . ++.++
T Consensus 207 ~L~~fD~~---~pv------~~~v~~~~~G~~~~~~~~dgilp~~-~~G~vllV~~~~~~~~~l~S~Dg---W--~sa~~ 271 (334)
T 2p9w_A 207 ALTAFDVS---KPY------AWPEPVKINGDFGTLSGTEKIVTVP-VGNESVLVGARAPYAISFRSWDN---W--KSANI 271 (334)
T ss_dssp SEEEEECS---SSS------CCCEECEESSCCCCCTTEEEEEEEE-ETTEEEEEEEETTEEEEEECSST---T--SEEEE
T ss_pred eEEEEcCC---CCc------ceeecccccCCcccccCcccccccc-cCCEEEEEEcCCCCEEEEECCCC---c--ceeEE
Confidence 99999765 111 0123332 532333345775 666 67855 88887777777777765 2 34556
Q ss_pred eeecCCeEecccceEEc------CCceEEEEecCchhhhcCCCCCCcccEEEEEEe
Q psy731 432 VAEDNATLIYPSDIRVD------RTGVLWVLSNKLPVFLYSKLKPEDINVRIFKST 481 (494)
Q Consensus 432 v~~d~~~l~~pd~~~id------~~g~Lwvlsnrl~~~~~~~~~~~~~nfrI~r~~ 481 (494)
+..-+..+. +.++.++ .++.+|++...+..-. .-+.--|.+.++.
T Consensus 272 ~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~f~~~~----~g~r~~f~~~di~ 322 (334)
T 2p9w_A 272 KKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAFFDNGA----HGGRSDYPLYKLD 322 (334)
T ss_dssp EEEECGGGG-SSCEEEEEEEEETTEEEEEEEECCGGGTT----TSCCCCEEEEECC
T ss_pred eeeecCccc-cCceeEEEEeccccCCeEEEEeeecCCcc----cCCcceeechhhh
Confidence 655555555 8888877 6789999998887433 2223336766654
No 48
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.91 E-value=5.5e-07 Score=87.20 Aligned_cols=222 Identities=14% Similarity=0.172 Sum_probs=141.9
Q ss_pred CCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEE
Q psy731 136 PCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVV 215 (494)
Q Consensus 136 ~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIV 215 (494)
..+++||.+.+.. .|.+||+.++++++++.++. ... .++++- ++.++|+++.+.+.|.+
T Consensus 8 ~~~~~~v~~~~~~--------~v~~~d~~~~~~~~~~~~~~-------~~~-~~~~s~-----dg~~l~~~~~~~~~i~~ 66 (331)
T 3u4y_A 8 TSNFGIVVEQHLR--------RISFFSTDTLEILNQITLGY-------DFV-DTAITS-----DCSNVVVTSDFCQTLVQ 66 (331)
T ss_dssp CCCEEEEEEGGGT--------EEEEEETTTCCEEEEEECCC-------CEE-EEEECS-----SSCEEEEEESTTCEEEE
T ss_pred CCCEEEEEecCCC--------eEEEEeCcccceeeeEEccC-------Ccc-eEEEcC-----CCCEEEEEeCCCCeEEE
Confidence 4678899998776 89999999999998887654 112 455532 56699999999999999
Q ss_pred EEccCCce-eEE-ecCccccCCCCCccccCCccceeeeeccccccccccccee-eEEeeecCCCCCcEEEEecCCCC--e
Q psy731 216 YNYRTNDS-HII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSN-MVVDVTSANCDDAFLYIADSGHN--H 290 (494)
Q Consensus 216 yd~~~~~~-~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~-i~VD~~~~~c~~~~~YI~D~~~~--g 290 (494)
||+.+++. .+. .. ...... ++++. ++.++|..+..+. .
T Consensus 67 ~d~~~~~~~~~~~~~--------------------------------~~~~~~~~~~s~-----dg~~l~~~~~~~~~~~ 109 (331)
T 3u4y_A 67 IETQLEPPKVVAIQE--------------------------------GQSSMADVDITP-----DDQFAVTVTGLNHPFN 109 (331)
T ss_dssp EECSSSSCEEEEEEE--------------------------------CSSCCCCEEECT-----TSSEEEECCCSSSSCE
T ss_pred EECCCCceeEEeccc--------------------------------CCCCccceEECC-----CCCEEEEecCCCCccc
Confidence 99999985 332 21 111222 44442 4567775544434 8
Q ss_pred EEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcc---eEeeechhhcC
Q psy731 291 IVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTT---EFAVTTKVLQN 367 (494)
Q Consensus 291 liVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~---ly~V~T~~L~~ 367 (494)
|.+||+++++.-+.... ..+..+++++|+ ++.||+....... +|.+...
T Consensus 110 i~v~d~~~~~~~~~~~~--------------------~~~~~~~~~spd----g~~l~~~~~~~~~~i~~~~~~~~---- 161 (331)
T 3u4y_A 110 MQSYSFLKNKFISTIPI--------------------PYDAVGIAISPN----GNGLILIDRSSANTVRRFKIDAD---- 161 (331)
T ss_dssp EEEEETTTTEEEEEEEC--------------------CTTEEEEEECTT----SSCEEEEEETTTTEEEEEEECTT----
T ss_pred EEEEECCCCCeEEEEEC--------------------CCCccceEECCC----CCEEEEEecCCCceEEEEEECCC----
Confidence 99999998875443211 123467999997 3679987665444 5555431
Q ss_pred CCcCccccccceEEecccCCCCCCCeEEeeCCCC-eEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceE
Q psy731 368 RSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETG-VIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIR 446 (494)
Q Consensus 368 ~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~ 446 (494)
..+.. .. .+.+ ..| ....+++++ .+| .||++....+.|..||..++... .....+... ..|.++.
T Consensus 162 g~~~~--~~--~~~~-~~~--~~~~~~~~s-pdg~~l~v~~~~~~~v~v~d~~~~~~~--~~~~~~~~~----~~~~~~~ 227 (331)
T 3u4y_A 162 GVLFD--TG--QEFI-SGG--TRPFNITFT-PDGNFAFVANLIGNSIGILETQNPENI--TLLNAVGTN----NLPGTIV 227 (331)
T ss_dssp CCEEE--EE--EEEE-CSS--SSEEEEEEC-TTSSEEEEEETTTTEEEEEECSSTTSC--EEEEEEECS----SCCCCEE
T ss_pred CcEee--cC--Cccc-cCC--CCccceEEC-CCCCEEEEEeCCCCeEEEEECCCCccc--ceeeeccCC----CCCceEE
Confidence 11111 00 1111 111 234688999 566 59999999999999999874220 002233221 5788999
Q ss_pred EcCCce-EEEEe
Q psy731 447 VDRTGV-LWVLS 457 (494)
Q Consensus 447 id~~g~-Lwvls 457 (494)
++++|. ||+.+
T Consensus 228 ~spdg~~l~v~~ 239 (331)
T 3u4y_A 228 VSRDGSTVYVLT 239 (331)
T ss_dssp ECTTSSEEEEEC
T ss_pred ECCCCCEEEEEE
Confidence 999886 77764
No 49
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.84 E-value=2.2e-08 Score=111.40 Aligned_cols=225 Identities=18% Similarity=0.231 Sum_probs=142.4
Q ss_pred ceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCC----cEEEEEEcCCCccccccCCccceEEEeecCCCCC
Q psy731 126 LTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQ----MQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDN 200 (494)
Q Consensus 126 lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~----~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~ 200 (494)
+.++.++.+|. .++||+.|.... +|.++++.+. .... .++ ..-.....++||. .+
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~--------~I~~~~~~g~~~~~~~~~--~i~-----~~~~~P~glavD~-----~~ 464 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQR--------MICSTQLDRAHGVSSYDT--VIS-----RDIQAPDGLAVDW-----IH 464 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTT--------SBEEEESCCCCC-CCCCC--BCC-----SCC--CCCEECCC-----SS
T ss_pred CcceEEEccccccCeEEEEecCCC--------eEEEEecCCCCCCcceEE--EEe-----CCCCCcceEEEEe-----eC
Confidence 44567778885 678999998876 7888888751 1111 111 1222345678874 46
Q ss_pred cEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcE
Q psy731 201 AFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAF 280 (494)
Q Consensus 201 ~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~ 280 (494)
+.+|+||...+.|.|+|+.......+-. ......++|+||. .+++
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~------------------------------~~~~~P~giavDp-----~~g~ 509 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFR------------------------------EQGSKPRAIVVDP-----VHGF 509 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECC------------------------------CSSCCCCCEECCS-----SSSC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEe------------------------------CCCCCcceEEEcc-----CCCc
Confidence 7899999999999999988665444411 0112356788885 2578
Q ss_pred EEEecCCC-CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEe
Q psy731 281 LYIADSGH-NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFA 359 (494)
Q Consensus 281 ~YI~D~~~-~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~ 359 (494)
+|++|.+. +.|.++++.......+.. ..+.++ .|||++|+ .+.|||.-....++++
T Consensus 510 ly~td~~~~~~I~~~~~dG~~~~~l~~----------------~~l~~P---nGlavd~~----~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 510 MYWTDWGTPAKIKKGGLNGVDIYSLVT----------------ENIQWP---NGITLDLL----SGRLYWVDSKLHSISS 566 (699)
T ss_dssp CEECCCSSSCCEEBCCSSSCCCCEESC----------------SSCSSC---CCEEECTT----TCCEEEEETTTTEEEE
T ss_pred EEEcccCCCCeEEEEeCCCCCeeEEEe----------------CCCCCc---cEEEEecc----CCEEEEEecCCCeEEE
Confidence 99999765 678787775432211111 112233 45999986 3699998776667777
Q ss_pred eechhhcCCCcCccccccceEEecc-cCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCe
Q psy731 360 VTTKVLQNRSLDFSRSNFDFKVMGS-RGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNAT 438 (494)
Q Consensus 360 V~T~~L~~~~~~~~~~~~~v~~~G~-~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~ 438 (494)
+... .. ..+.+.. .+..+...|+++| + +.||+++...+.|.++|+.+|. ...+|.. .
T Consensus 567 ~d~d----G~--------~~~~~~~~~~~~~~P~glavd-~-~~lywtd~~~~~V~~~d~~~G~-----~~~~i~~---~ 624 (699)
T 1n7d_A 567 IDVN----GG--------NRKTILEDEKRLAHPFSLAVF-E-DKVFWTDIINEAIFSANRLTGS-----DVNLLAE---N 624 (699)
T ss_dssp ECSS----SS--------CCEEECCCSSSCSSCCCCEEE-T-TEEEEECSTTTCEEEEETTTEE-----EEECCCT---T
T ss_pred EccC----CC--------ceEEEEecCCcCCCceEeEEE-C-CEEEEEeCCCCeEEEEEccCCC-----ceEEeec---C
Confidence 7542 11 1111221 1223557899999 4 5899999999999999987642 3344432 2
Q ss_pred EecccceEEcCC
Q psy731 439 LIYPSDIRVDRT 450 (494)
Q Consensus 439 l~~pd~~~id~~ 450 (494)
+..|.+|++.+.
T Consensus 625 ~~~P~~i~v~~~ 636 (699)
T 1n7d_A 625 LLSPEDMVLFHQ 636 (699)
T ss_dssp CSSCCCCCBCSS
T ss_pred CCCCcEEEEeCc
Confidence 556888887543
No 50
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.84 E-value=1.9e-06 Score=83.40 Aligned_cols=240 Identities=10% Similarity=0.089 Sum_probs=144.3
Q ss_pred eEEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECCCCcE-EEEEEcCCCccccccCCccc-eEEEeecCCCCCcEE
Q psy731 127 TSVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLRQQMQ-IRFFQLKEKTDYTEESKFSN-MVVDVTSANCDNAFL 203 (494)
Q Consensus 127 vsV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~t~~v-i~~~~lp~~~~~~~~S~l~d-~vVD~~~~~c~~~~v 203 (494)
..+ .+.++++++ ||+.+.+.. +|.+||+.++++ .+.+.... .... ++++ .+..++
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~--------~i~~~d~~~~~~~~~~~~~~~--------~~~~~~~~s-----~dg~~l 98 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQ--------TLVQIETQLEPPKVVAIQEGQ--------SSMADVDIT-----PDDQFA 98 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTC--------EEEEEECSSSSCEEEEEEECS--------SCCCCEEEC-----TTSSEE
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCC--------eEEEEECCCCceeEEecccCC--------CCccceEEC-----CCCCEE
Confidence 344 778888876 999988776 899999999997 66555333 2233 6664 257788
Q ss_pred EEeeCCCC--eEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEE
Q psy731 204 YIADSGHN--HIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFL 281 (494)
Q Consensus 204 YItDs~~~--~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~ 281 (494)
|+++...+ .|.|||+.+++..+.-. .......++++. ++.++
T Consensus 99 ~~~~~~~~~~~i~v~d~~~~~~~~~~~-------------------------------~~~~~~~~~~sp-----dg~~l 142 (331)
T 3u4y_A 99 VTVTGLNHPFNMQSYSFLKNKFISTIP-------------------------------IPYDAVGIAISP-----NGNGL 142 (331)
T ss_dssp EECCCSSSSCEEEEEETTTTEEEEEEE-------------------------------CCTTEEEEEECT-----TSSCE
T ss_pred EEecCCCCcccEEEEECCCCCeEEEEE-------------------------------CCCCccceEECC-----CCCEE
Confidence 86555545 89999999887654411 111234556653 35679
Q ss_pred EEecCCCCe-EEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEee
Q psy731 282 YIADSGHNH-IVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAV 360 (494)
Q Consensus 282 YI~D~~~~g-liVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V 360 (494)
|+++..... |.+|++..+....-. ..+.+....+..+++++|+ ++.||+....+..++.+
T Consensus 143 ~~~~~~~~~~i~~~~~~~~g~~~~~---------------~~~~~~~~~~~~~~~~spd----g~~l~v~~~~~~~v~v~ 203 (331)
T 3u4y_A 143 ILIDRSSANTVRRFKIDADGVLFDT---------------GQEFISGGTRPFNITFTPD----GNFAFVANLIGNSIGIL 203 (331)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEE---------------EEEEECSSSSEEEEEECTT----SSEEEEEETTTTEEEEE
T ss_pred EEEecCCCceEEEEEECCCCcEeec---------------CCccccCCCCccceEECCC----CCEEEEEeCCCCeEEEE
Confidence 999988777 999998754321100 0111111234678999997 36899977655555555
Q ss_pred echhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCe-EEEeccCCCeEEEEeCCCCccccccceeeee----ec
Q psy731 361 TTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGV-IFYALLVKSGVGCWNTFRGEEYNEKSMGLVA----ED 435 (494)
Q Consensus 361 ~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~-ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~----~d 435 (494)
..+ ... ....++.+. . .....+++++ .+|. ||++....+.|..||..+|+ .. .+..+. .+
T Consensus 204 d~~---~~~-----~~~~~~~~~-~--~~~~~~~~~s-pdg~~l~v~~~~~~~i~~~d~~~~~-~~--~~~~~~~~~~~~ 268 (331)
T 3u4y_A 204 ETQ---NPE-----NITLLNAVG-T--NNLPGTIVVS-RDGSTVYVLTESTVDVFNFNQLSGT-LS--FVKSFGHGLLID 268 (331)
T ss_dssp ECS---STT-----SCEEEEEEE-C--SSCCCCEEEC-TTSSEEEEECSSEEEEEEEETTTTE-EE--EEEEEECCCCCC
T ss_pred ECC---CCc-----ccceeeecc-C--CCCCceEEEC-CCCCEEEEEEcCCCEEEEEECCCCc-ee--eecccccccccC
Confidence 432 111 000122221 1 1345789999 5665 89998888999999998752 20 111111 11
Q ss_pred CCeEecccceEEcCCc-eEEEEec
Q psy731 436 NATLIYPSDIRVDRTG-VLWVLSN 458 (494)
Q Consensus 436 ~~~l~~pd~~~id~~g-~Lwvlsn 458 (494)
.....-+.++.+.++| +||+.+.
T Consensus 269 ~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 269 PRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp CGGGTTCCCEEECTTSSEEEEEET
T ss_pred CCCcccccceEECCCCCEEEEecC
Confidence 1111122457888887 5777753
No 51
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.82 E-value=7.7e-07 Score=97.87 Aligned_cols=178 Identities=15% Similarity=0.147 Sum_probs=123.4
Q ss_pred CCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCC
Q psy731 198 CDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCD 277 (494)
Q Consensus 198 c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~ 277 (494)
+.++.+|+||...+.|.++++.......+-. .......+|+||- .
T Consensus 46 ~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~------------------------------~g~~~P~GlAvD~-----~ 90 (628)
T 4a0p_A 46 VTDNRIYWTDISLKTISRAFMNGSALEHVVE------------------------------FGLDYPEGMAVDW-----L 90 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEEC------------------------------SSCSCCCEEEEET-----T
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCcEEEEe------------------------------CCCCCcceEEEEe-----C
Confidence 4789999999999999999987654433311 0112356889984 3
Q ss_pred CcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC-Ccc
Q psy731 278 DAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA-STT 356 (494)
Q Consensus 278 ~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls-s~~ 356 (494)
.+.+|++|.....|.|.++.+.....+....+ ..-.+||++|. .+.|||.-.. ..+
T Consensus 91 ~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l-------------------~~P~~iavdp~----~G~lY~tD~g~~~~ 147 (628)
T 4a0p_A 91 GKNLYWADTGTNRIEVSKLDGQHRQVLVWKDL-------------------DSPRALALDPA----EGFMYWTEWGGKPK 147 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSTTCEEEECSSC-------------------CCEEEEEEETT----TTEEEEEECSSSCE
T ss_pred CCEEEEEECCCCEEEEEecCCCcEEEEEeCCC-------------------CCcccEEEccC----CCeEEEeCCCCCCE
Confidence 57899999999999999998665333322111 11357999985 3599997654 336
Q ss_pred eEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecC
Q psy731 357 EFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDN 436 (494)
Q Consensus 357 ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~ 436 (494)
++++.. |.+ ..+.+.+. .....|+++|+.++.||+++...+.|.+.|.++ . +.+++..
T Consensus 148 I~r~~~----dG~--------~~~~l~~~--~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG--~----~~~v~~~-- 205 (628)
T 4a0p_A 148 IDRAAM----DGS--------ERTTLVPN--VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG--L----NREVIAD-- 205 (628)
T ss_dssp EEEEET----TSC--------SCEEEECS--CSSEEEEEEETTTTEEEEEETTTTEEEEEETTS--C----SCEEEEE--
T ss_pred EEEEeC----CCC--------ceEEEECC--CCCcceEEEccccCEEEEEECCCCEEEEEcCCC--C----ceEEeec--
Confidence 666543 111 12233332 245789999977899999999999999999988 2 3345543
Q ss_pred CeEecccceEEcCCceEEEEe
Q psy731 437 ATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 437 ~~l~~pd~~~id~~g~Lwvls 457 (494)
.+..|.+++++. +.||++.
T Consensus 206 -~l~~P~glav~~-~~ly~tD 224 (628)
T 4a0p_A 206 -DLPHPFGLTQYQ-DYIYWTD 224 (628)
T ss_dssp -CCSCEEEEEEET-TEEEEEE
T ss_pred -cCCCceEEEEEC-CEEEEec
Confidence 367899999986 6899985
No 52
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.82 E-value=6.6e-07 Score=98.21 Aligned_cols=225 Identities=16% Similarity=0.187 Sum_probs=144.3
Q ss_pred CCceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcE
Q psy731 124 RNLTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAF 202 (494)
Q Consensus 124 ~~lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~ 202 (494)
..+..+.++.+|. .++||+.|.+.. +|.++++........+ +.. +-...+.++||. .+..
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~--------~I~r~~~~g~~~~~~v-~~~-----~~~~P~GlAvD~-----~~~~ 97 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEE--------AIKRTEFNKTESVQNV-VVS-----GLLSPDGLACDW-----LGEK 97 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTT--------EEEEEEC-----CEEE-ECS-----SCSCEEEEEEET-----TTTE
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCC--------eEEEEEccCCCceEEE-EeC-----CCCCcCeEEEEe-----cCCE
Confidence 3567788999995 789999999877 8999998765321111 122 224567899985 5789
Q ss_pred EEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEE
Q psy731 203 LYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLY 282 (494)
Q Consensus 203 vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~Y 282 (494)
+|+||+..+.|.|+|++......+-. .......+|+||. .++++|
T Consensus 98 ly~~d~~~~~I~v~~~dG~~~~~l~~------------------------------~~l~~P~~Iavdp-----~~g~ly 142 (619)
T 3s94_A 98 LYWTDSETNRIEVSNLDGSLRKVLFW------------------------------QELDQPRAIALDP-----SSGFMY 142 (619)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC------------------------------SSCSCCCCEEEET-----TTTEEE
T ss_pred EEEEeCCCCEEEEEECCCCCEEEEEe------------------------------CCCCCCceEEEec-----CCCeEE
Confidence 99999999999999997554333311 1123467899995 358999
Q ss_pred EecCC-CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeee
Q psy731 283 IADSG-HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVT 361 (494)
Q Consensus 283 I~D~~-~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~ 361 (494)
++|.+ .+.|.+.++.......+... .+.+ -.||||+++ .+.||+.-....+++++.
T Consensus 143 ~tD~g~~~~I~r~~~dG~~~~~l~~~----------------~~~~---P~Glald~~----~~~LY~aD~~~~~I~~~~ 199 (619)
T 3s94_A 143 WTDWGEVPKIERAGMDGSSRFIIINS----------------EIYW---PNGLTLDYE----EQKLYWADAKLNFIHKSN 199 (619)
T ss_dssp EEECSSSCEEEEEETTSCSCEEEECS----------------SCSS---EEEEEEETT----TTEEEEEETTTCCEEEES
T ss_pred EeccCCCCEEEEEECCCCceEEEEeC----------------CCCC---CcEEEEEcc----CCEEEEEeCCCCeEEEec
Confidence 99976 35677777765433322211 1223 356999986 369999876666777775
Q ss_pred chhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEec
Q psy731 362 TKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIY 441 (494)
Q Consensus 362 T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~ 441 (494)
.. ... . .. +.+ +......|++++ ++ .||+++...++|.+.|..+|. +..++..+ +.-
T Consensus 200 ~d----G~~----~-~~---~~~-~~~~~P~gi~~~-~~-~ly~td~~~~~V~~~d~~tg~-----~~~~i~~~---~~~ 256 (619)
T 3s94_A 200 LD----GTN----R-QA---VVK-GSLPHPFALTLF-ED-ILYWTDWSTHSILACNKYTGE-----GLREIHSD---IFS 256 (619)
T ss_dssp SS----CCE----E-C-------------CCCEEES-SS-EEEEECTTTCSEEEEESSSCC-----CCEECCSC---CCC
T ss_pred CC----CCc----c-EE---EEe-CCCCCceEEEEe-CC-EEEEecCCCCEEEEEECCCCc-----ccEEEecC---CCC
Confidence 42 110 0 11 111 112446799999 44 999999999999999987652 33455433 345
Q ss_pred ccceEEc
Q psy731 442 PSDIRVD 448 (494)
Q Consensus 442 pd~~~id 448 (494)
|.++++-
T Consensus 257 p~~i~v~ 263 (619)
T 3s94_A 257 PMDIHAF 263 (619)
T ss_dssp CSEEEEC
T ss_pred CcEEEEE
Confidence 7777763
No 53
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.80 E-value=1.5e-06 Score=95.29 Aligned_cols=220 Identities=13% Similarity=0.151 Sum_probs=139.3
Q ss_pred ceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE
Q psy731 126 LTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 126 lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
+.++.++..|. .++|++.|.... +|.++++........+ ...-.....++||. ....+|
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~--------~I~r~~~~g~~~~~v~-------~~~~~~p~GlAvD~-----~~~~lY 407 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVR--------AIRRSFIDGSGSQFVV-------TAQIAHPDGIAVDW-----VARNLY 407 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTT--------EEEEEETTSCSCEEEE-------CSSCSCCCEEEEET-----TTTEEE
T ss_pred cCccEEEEEEcCCCeEEEEeCCCC--------eEEEEEcCCCccEEEE-------ECCCCCcCceEEec-----ccCcEE
Confidence 45566777775 677888887665 6777777654322111 11234567899985 478899
Q ss_pred EeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 205 IADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 205 ItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
+||++.+.|-|.+++......+-. .......+|+||. .++++|++
T Consensus 408 ~tD~~~~~I~v~~~~G~~~~~l~~------------------------------~~l~~P~~iavdp-----~~G~ly~t 452 (619)
T 3s94_A 408 WTDTGTDRIEVTRLNGTMRKILIS------------------------------EDLEEPRAIVLDP-----MVGYMYWT 452 (619)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEC------------------------------TTCCSEEEEEEET-----TTTEEEEE
T ss_pred EEeCCCCcEEEEeCCCCeEEEEEE------------------------------CCCCCeeeEEEEc-----CCCcEEEe
Confidence 999999999999997554322211 1123468899995 35899999
Q ss_pred cCCC-CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeech
Q psy731 285 DSGH-NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTK 363 (494)
Q Consensus 285 D~~~-~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~ 363 (494)
|.+. +.|...++.....-.+.. ..+.|+ .||||+++ .+.||+.-....++.++..
T Consensus 453 D~g~~~~I~r~~~dG~~~~~l~~----------------~~l~~P---~GlalD~~----~~~LY~aD~~~~~I~~~~~- 508 (619)
T 3s94_A 453 DWGEIPKIERAALDGSDRVVLVN----------------TSLGWP---NGLALDYD----EGKIYWGDAKTDKIEVMNT- 508 (619)
T ss_dssp ECSSSCEEEEEETTSCSCEEEEC----------------SSCSCE---EEEEEETT----TTEEEEEETTTTEEEEEES-
T ss_pred cCCCCCEEEEEccCCCccEEEEe----------------CCCCCC---eeeEEccc----CCEEEEEECCCCEEEEEec-
Confidence 9875 567777765433221211 123344 46999876 3699997766667776653
Q ss_pred hhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEeccc
Q psy731 364 VLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPS 443 (494)
Q Consensus 364 ~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd 443 (494)
+.+. .+.+...+ .....|++++ .+.||+++...++|.+.|..+| +..+++.+ +.-|-
T Consensus 509 ---dG~~--------~~~~~~~~-l~~P~glav~--~~~ly~tD~~~~~I~~~~k~~g------~~~~~~~~---~~~~~ 565 (619)
T 3s94_A 509 ---DGTG--------RRVLVEDK-IPHIFGFTLL--GDYVYWTDWQRRSIERVHKRSA------EREVIIDQ---LPDLM 565 (619)
T ss_dssp ---SSCC--------CEEEEECC-CCSSCCEEEE--TTEEEEECTTSSCEEEEESSSC------CEEEEECS---CCCEE
T ss_pred ---CCCc--------eEEEeccC-CCCcEEEEEE--CCEEEEeecCCCeEEEEEcCCC------ceEEEecC---CCCCc
Confidence 2211 11122111 2456799998 4599999999999999998874 33455443 33344
Q ss_pred ceEE
Q psy731 444 DIRV 447 (494)
Q Consensus 444 ~~~i 447 (494)
++++
T Consensus 566 ~i~~ 569 (619)
T 3s94_A 566 GLKA 569 (619)
T ss_dssp EEEE
T ss_pred eeee
Confidence 5554
No 54
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.80 E-value=1.1e-06 Score=92.26 Aligned_cols=273 Identities=13% Similarity=0.074 Sum_probs=155.4
Q ss_pred Ceeeeeeee----CCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCC
Q psy731 63 CLPVSLDKW----HDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCD 138 (494)
Q Consensus 63 ~~p~gv~v~----~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~ 138 (494)
.-|.|+++. +|+||++-.. ..+..+..+. +.+...- ..+..+.++.+|..+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~------~~I~~id~~~----------g~v~~~~---------~~~~~P~giavd~dG 193 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR------DAFRHVDFVN----------QYVDIKT---------TNIGQCADVNFTLNG 193 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT------SCEEEEETTT----------TEEEEEC---------CCCSCEEEEEECTTC
T ss_pred CCCceEEEccccCCCEEEEEeCC------CCEEEEECCC----------CEEEEee---------cCCCCccEEEECCCC
Confidence 458999996 4999999754 3577776532 2333221 145678999999999
Q ss_pred eEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEc
Q psy731 139 RLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNY 218 (494)
Q Consensus 139 ~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~ 218 (494)
+|||.|.+... .+..++.++...+.... ..++ .....++++||- .++++||+|...+.|.+||.
T Consensus 194 ~lyVad~~~~~----~~~gv~~~~~~~~~~~~-~~~~------~~~~P~giavd~-----~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 194 DMVVVDDQSSD----TNTGIYLFTRASGFTER-LSLC------NARGAKTCAVHP-----QNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp CEEEEECCSCT----TSEEEEEECGGGTTCCE-EEEE------ECSSBCCCEECT-----TTCCEEECBTTCSEEEEECT
T ss_pred CEEEEcCCCCc----ccceEEEEECCCCeecc-cccc------ccCCCCEEEEeC-----CCCeEEEEECCCCEEEEEEC
Confidence 99999986521 11236666554332211 1111 234567788863 47899999999999999999
Q ss_pred cCCce-eEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcC
Q psy731 219 RTNDS-HIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYR 297 (494)
Q Consensus 219 ~~~~~-~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~ 297 (494)
.++.. +.+-. .. .......|++|. +..++||+|...+.|.++++.
T Consensus 258 ~~g~~~~~~~~-----------------------~~------~~~~~~~ia~dp-----dG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 258 ATGTLTEEEVM-----------------------MD------TKGSNFHIVWHP-----TGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp TTCCEEEEEEE-----------------------CS------CCSSCEEEEECT-----TSSEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEec-----------------------cC------CCCCcccEEEeC-----CCCEEEEEeCCCCEEEEEeCC
Confidence 98877 44410 00 001123577774 356899999999999998876
Q ss_pred C--CcE---EEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCC----CCCceeEEEeeCCCcceEeeechhhcCC
Q psy731 298 T--NDS---HIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLT----RDNFRVMYFHPLASTTEFAVTTKVLQNR 368 (494)
Q Consensus 298 ~--~~s---wrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~----~~g~r~LYf~plss~~ly~V~T~~L~~~ 368 (494)
. ++. ..+... +. .+...+-.-....|..+ .|||+.+.. .+....||+.--...++.++.. +.
T Consensus 304 ~~~~~~~~~~~~ag~-~g-~~g~~dg~~~~a~~~~P---~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~----~G 374 (433)
T 4hw6_A 304 RETGKLAVPYIVCGQ-HS-SPGWVDGMGTGARLWGP---NQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP----EG 374 (433)
T ss_dssp TTTCCBCCCEEEEEC-TT-CCCCBCEEGGGSBCSSE---EEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT----TS
T ss_pred CCCcccCcEEEEEec-CC-CCccCCCcccceEEcCC---ccEEEEccccccccCCCCcEEEEECCCCEEEEECC----CC
Confidence 3 221 111110 00 00000000000123333 458982100 0013589997766666666642 11
Q ss_pred CcCc-cccc----cceE--EecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCC
Q psy731 369 SLDF-SRSN----FDFK--VMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTF 419 (494)
Q Consensus 369 ~~~~-~~~~----~~v~--~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~ 419 (494)
.+.. .... .-+. .++.........|+++|+.+|+||+++...+.|.+++++
T Consensus 375 ~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 375 RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1100 0000 0000 000111123467899998899999999999999998865
No 55
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.78 E-value=5.7e-07 Score=88.64 Aligned_cols=204 Identities=12% Similarity=0.138 Sum_probs=126.3
Q ss_pred ceEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCC-CcEE
Q psy731 126 LTSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCD-NAFL 203 (494)
Q Consensus 126 lvsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~-~~~v 203 (494)
+..+.++.+|+ .++|||.|.+. .|.++|..++++. .+.-.. .-.+..+.+++++| . ++.+
T Consensus 79 ~~~p~gi~~~~~~g~l~v~d~~~---------~i~~~d~~~g~~~-~~~~~~--~~~~~~~p~~i~~d------~~~G~l 140 (322)
T 2fp8_A 79 CGRTYDISYNLQNNQLYIVDCYY---------HLSVVGSEGGHAT-QLATSV--DGVPFKWLYAVTVD------QRTGIV 140 (322)
T ss_dssp HCCEEEEEEETTTTEEEEEETTT---------EEEEECTTCEECE-EEESEE--TTEECSCEEEEEEC------TTTCCE
T ss_pred CCCCceEEEcCCCCcEEEEECCC---------CEEEEeCCCCEEE-EecccC--CCCcccccceEEEe------cCCCEE
Confidence 34688999996 89999999874 4889998876532 221110 01123567889987 4 6789
Q ss_pred EEeeCCC-----------------CeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeeccccccccccccee
Q psy731 204 YIADSGH-----------------NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSN 266 (494)
Q Consensus 204 YItDs~~-----------------~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~ 266 (494)
||+|+.. ++|++||..+++...+.. .....+.
T Consensus 141 ~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-------------------------------~~~~p~g 189 (322)
T 2fp8_A 141 YFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-------------------------------ELHVPGG 189 (322)
T ss_dssp EEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-------------------------------EESCCCE
T ss_pred EEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-------------------------------CCccCcc
Confidence 9999863 569999988777654411 1123466
Q ss_pred eEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCcee
Q psy731 267 MVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRV 346 (494)
Q Consensus 267 i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~ 346 (494)
|+++. ++.++|++|...+.|.+|++.+... +...+ +.-..|-+||+++++ | .
T Consensus 190 ia~~~-----dg~~lyv~d~~~~~I~~~~~~~~~~--------------~~~~~----~~~~~gP~gi~~d~~---G--~ 241 (322)
T 2fp8_A 190 AEVSA-----DSSFVLVAEFLSHQIVKYWLEGPKK--------------GTAEV----LVKIPNPGNIKRNAD---G--H 241 (322)
T ss_dssp EEECT-----TSSEEEEEEGGGTEEEEEESSSTTT--------------TCEEE----EEECSSEEEEEECTT---S--C
T ss_pred eEECC-----CCCEEEEEeCCCCeEEEEECCCCcC--------------Cccce----EEeCCCCCCeEECCC---C--C
Confidence 77773 3568999999989999999886320 11110 000113577999875 3 5
Q ss_pred EEEeeCC----------CcceEeeechhhcCCCcCccccccceEEeccc-CC-CCCCCeEEeeCCCCeEEEeccCCCeEE
Q psy731 347 MYFHPLA----------STTEFAVTTKVLQNRSLDFSRSNFDFKVMGSR-GT-GSQSGASSLDEETGVIFYALLVKSGVG 414 (494)
Q Consensus 347 LYf~pls----------s~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~-G~-~~qs~g~~~D~~~G~ly~~~~~~~aI~ 414 (494)
||..-.. ...++++..+ . +.++.+... |. .....+++.+ .|.||++....+.|.
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~----G--------~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEF----G--------NILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVG 307 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTT----S--------CEEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSCSEEE
T ss_pred EEEEecCcccccccCCCccEEEEECCC----C--------CEEEEEECCCCCccccceEEEEe--CCEEEEeecCCCceE
Confidence 8875433 1245555321 1 112223321 21 2334555544 799999999999999
Q ss_pred EEeCCC
Q psy731 415 CWNTFR 420 (494)
Q Consensus 415 ~w~~~~ 420 (494)
++++..
T Consensus 308 ~~~~~~ 313 (322)
T 2fp8_A 308 ILVYDK 313 (322)
T ss_dssp EEEC--
T ss_pred EEeccc
Confidence 999876
No 56
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.73 E-value=4.3e-07 Score=90.79 Aligned_cols=220 Identities=15% Similarity=0.168 Sum_probs=124.4
Q ss_pred CCeEEEEeCCCCCCCCCCCCE-EEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC---CCCe
Q psy731 137 CDRLWALDSGVVEGKMEQPPS-VQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS---GHNH 212 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pk-lv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs---~~~~ 212 (494)
.++|+++|+.+. + +..+.+....... -..+ ++++||. +++++||||+ ..++
T Consensus 92 ~~~i~~~d~~tg--------~~~~~~~~~~~~~~~-~~~~-----------~~v~vd~-----~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 92 VPKLVAWDTLNN--------QLSRVIYLPPPITLS-NSFV-----------NDLAVDL-----IHNFVYISDPAPDDKAA 146 (343)
T ss_dssp CCEEEEEETTTT--------EEEEEEECCTTTSCT-TCCC-----------CEEEEET-----TTTEEEEEECCSGGGCE
T ss_pred CCeEEEEECCCC--------eEEEEEECChhhccc-cccc-----------ceEEEec-----CCCEEEEEcCccCCCCe
Confidence 479999998765 3 5566765332100 0111 3677764 4679999999 8899
Q ss_pred EEEEEccCCceeEEe--cCccccCCCCCccccCCccceeee-ecccccc-cccccceeeEEeeecCCCCCcEEEEecCCC
Q psy731 213 IVVYNYRTNDSHIIH--HNYLHFDPLFGDFTIGGEYSEFFQ-LKEKTDY-TEESKFSNMVVDVTSANCDDAFLYIADSGH 288 (494)
Q Consensus 213 iIVyd~~~~~~~rv~--~~~~~~dp~~~~f~i~g~~~~~f~-l~~~~~~-~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~ 288 (494)
|+|||+.+++.||+. |..+.++| +.|.+.|.. |. .+.+... .-....+.|+++. +..++|++|...
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~--~~~~~~g~~---~~~~~~~g~~~~~~~~~~gia~s~-----dg~~ly~~~~~~ 216 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPED--IDLVIDGVP---VQIGQPDGTVIRPHLGVNGIVLDA-----ENEWLYLSPMHS 216 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCS--CCCEETTEE---CBEECTTSCEECCCCCEEEEEECT-----TSCEEEEEESSC
T ss_pred EEEEECCCCCEEEEecCCCcccccc--cceeECCEE---EEeccCCCceeceecccceeEecc-----CCCEEEEEeCCC
Confidence 999999999999984 33666666 677776642 21 1110100 0012346677763 356788888777
Q ss_pred CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCC
Q psy731 289 NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNR 368 (494)
Q Consensus 289 ~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~ 368 (494)
..|.+++....+ ............+...|. ....+||+++++ ..||+.-.....++.+..+ +.
T Consensus 217 ~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~g~----~g~pdgia~d~~-----G~l~va~~~~~~V~~~d~~---~G 279 (343)
T 2qe8_A 217 TSMYRIKSADLS-----NLQLTDAELGSKIERYSE----KPICDGISIDKD-----HNIYVGDLAHSAIGVITSA---DR 279 (343)
T ss_dssp SEEEEEEHHHHT-----CTTCCHHHHHTTCEEEEE----CCSCSCEEECTT-----CCEEEEEGGGTEEEEEETT---TT
T ss_pred CeEEEEEHHHhc-----CCCCChhhhhcceEeccc----CCCCceEEECCC-----CCEEEEccCCCeEEEEECC---CC
Confidence 666666532100 000000000001111111 113577999875 3799977666677777651 11
Q ss_pred CcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeC
Q psy731 369 SLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNT 418 (494)
Q Consensus 369 ~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~ 418 (494)
. ++.+..........++++| ..|.||++.-..+.+..++.
T Consensus 280 ~---------~~~~~~~~~~~~p~~va~~-~~g~l~v~~~~~~~~~~f~~ 319 (343)
T 2qe8_A 280 A---------YKLLVTDEKLSWTDSFNFG-SDGYLYFDCNQLHHSAPLNA 319 (343)
T ss_dssp E---------EEEEEECGGGSCEEEEEEC-TTSCEEEEECCGGGSGGGBT
T ss_pred C---------EEEEEECCceecCCeeEEC-CCCcEEEEeCcccccccccc
Confidence 1 1111111012356899999 67999999877666554543
No 57
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.67 E-value=1.6e-05 Score=78.74 Aligned_cols=225 Identities=13% Similarity=0.134 Sum_probs=143.0
Q ss_pred EeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 129 VVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 129 V~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
+..+...++++ |++...... .|.+||+.++++++.+..+. ....+++. .++.++|++.
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~--------~i~v~d~~~~~~~~~~~~~~--------~v~~~~~s-----pdg~~l~~~~ 92 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSN--------DVSIIDTATNNVIATVPAGS--------SPQGVAVS-----PDGKQVYVTN 92 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGT--------EEEEEETTTTEEEEEEECSS--------SEEEEEEC-----TTSSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCC--------eEEEEECCCCeEEEEEECCC--------CccceEEC-----CCCCEEEEEE
Confidence 56778888775 556654444 79999999999998877544 34455553 3577999999
Q ss_pred CCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 208 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
+..+.|.|||+.+++..+.-. .......+.+.. ++.++|++...
T Consensus 93 ~~~~~v~v~d~~~~~~~~~~~-------------------------------~~~~~~~~~~s~-----dg~~l~~~~~~ 136 (391)
T 1l0q_A 93 MASSTLSVIDTTSNTVAGTVK-------------------------------TGKSPLGLALSP-----DGKKLYVTNNG 136 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEE-------------------------------CSSSEEEEEECT-----TSSEEEEEETT
T ss_pred CCCCEEEEEECCCCeEEEEEe-------------------------------CCCCcceEEECC-----CCCEEEEEeCC
Confidence 999999999999987755511 011233444432 45788888888
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcC
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQN 367 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~ 367 (494)
+..|.+||+++++.-+.... ..++.+++++|+ ++.||+.......++....+-
T Consensus 137 ~~~v~~~d~~~~~~~~~~~~--------------------~~~~~~~~~~~d----g~~l~~~~~~~~~v~~~d~~~--- 189 (391)
T 1l0q_A 137 DKTVSVINTVTKAVINTVSV--------------------GRSPKGIAVTPD----GTKVYVANFDSMSISVIDTVT--- 189 (391)
T ss_dssp TTEEEEEETTTTEEEEEEEC--------------------CSSEEEEEECTT----SSEEEEEETTTTEEEEEETTT---
T ss_pred CCEEEEEECCCCcEEEEEec--------------------CCCcceEEECCC----CCEEEEEeCCCCEEEEEECCC---
Confidence 88999999998765433211 123466889886 368887665554555443321
Q ss_pred CCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEecc--CCCeEEEEeCCCCccccccceeeeeecCCeEecccce
Q psy731 368 RSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALL--VKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDI 445 (494)
Q Consensus 368 ~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~--~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~ 445 (494)
.. ..+.+... ....++++++....||.+.. ..+.|..||..++++ ...+... ..|.++
T Consensus 190 ~~--------~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~-----~~~~~~~----~~~~~~ 249 (391)
T 1l0q_A 190 NS--------VIDTVKVE---AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI-----TARIPVG----PDPAGI 249 (391)
T ss_dssp TE--------EEEEEECS---SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE-----EEEEECC----SSEEEE
T ss_pred Ce--------EEEEEecC---CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE-----EEEEecC----CCccEE
Confidence 11 11112111 22456788844446777776 689999999987421 2333222 235677
Q ss_pred EEcCCc-eEEEEe
Q psy731 446 RVDRTG-VLWVLS 457 (494)
Q Consensus 446 ~id~~g-~Lwvls 457 (494)
.+.++| .||+..
T Consensus 250 ~~s~dg~~l~~s~ 262 (391)
T 1l0q_A 250 AVTPDGKKVYVAL 262 (391)
T ss_dssp EECTTSSEEEEEE
T ss_pred EEccCCCEEEEEc
Confidence 777777 466664
No 58
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.66 E-value=9.5e-06 Score=79.46 Aligned_cols=254 Identities=13% Similarity=0.155 Sum_probs=144.3
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
.++..+.++++++|++.+.... .-.|.+||+.++++...-.++. .......++++- +..++|++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~~~~-----~~~~p~~~a~sp-----dg~~l~~~ 103 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQTAHKLNTVVA-----PGTPPAYVAVDE-----ARQLVYSA 103 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETT------EEEEEEEEEETTEEEEEEEEEE-----ESCCCSEEEEET-----TTTEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCC------CceEEEEEecCCcEEEeeeeec-----CCCCCEEEEECC-----CCCEEEEE
Confidence 4456678888999999886311 1168899998776433222222 334556677763 57789999
Q ss_pred eCCCCeEEEEEcc-CCceeEEecCcc-ccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 207 DSGHNHIVVYNYR-TNDSHIIHHNYL-HFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 207 Ds~~~~iIVyd~~-~~~~~rv~~~~~-~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
+...+.+.+||+. +|+...+..... ...|. ..........++++. ++. +|++
T Consensus 104 ~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~--------------------~~~~~~~~~~~~~sp-----dg~-l~v~ 157 (347)
T 3hfq_A 104 NYHKGTAEVMKIAADGALTLTDTVQHSGHGPR--------------------PEQDGSHIHYTDLTP-----DNR-LAVI 157 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECCCCCSS--------------------TTCSSCCEEEEEECT-----TSC-EEEE
T ss_pred eCCCCEEEEEEeCCCCCeeecceeecCCCCCC--------------------ccccCCCceEEEECC-----CCc-EEEE
Confidence 9988999999995 555554421110 00000 000112234455553 234 8999
Q ss_pred cCCCCeEEEEEcC-CCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc--ceEeee
Q psy731 285 DSGHNHIVVYNYR-TNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST--TEFAVT 361 (494)
Q Consensus 285 D~~~~gliVydl~-~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~--~ly~V~ 361 (494)
+.....|.+||+. +++.-.+...... + ..+..++++||+ ++.||+....+. .+|.+.
T Consensus 158 ~~~~~~v~~~~~~~~g~~~~~~~~~~~--~--------------g~~p~~~~~spd----g~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 158 DLGSDKVYVYNVSDAGQLSEQSVLTME--A--------------GFGPRHLVFSPD----GQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECC--T--------------TCCEEEEEECTT----SSEEEEEETTTTEEEEEEEE
T ss_pred eCCCCEEEEEEECCCCcEEEeeeEEcC--C--------------CCCCceEEECCC----CCEEEEEeCCCCEEEEEEec
Confidence 9989999999998 4432222110000 0 123567999997 368998654443 345444
Q ss_pred chhhcCCCcCccccccceEEecccC----CCCCCCeEEeeCCCC-eEEEeccCCCeEEEEeCCCCccccccceeeeeecC
Q psy731 362 TKVLQNRSLDFSRSNFDFKVMGSRG----TGSQSGASSLDEETG-VIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDN 436 (494)
Q Consensus 362 T~~L~~~~~~~~~~~~~v~~~G~~G----~~~qs~g~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~ 436 (494)
.. ...+ ..++.+.... ......+++++ .+| .||++....+.|..|+.+. . .....+..-+
T Consensus 218 ~~---~g~~------~~~~~~~~~~~~~~~~~~~~~i~~s-pdG~~l~v~~~~~~~v~v~~~~~--~---g~~~~~~~~~ 282 (347)
T 3hfq_A 218 TQ---TGAF------TQLGIVKTIPADYTAHNGAAAIRLS-HDGHFLYVSNRGYNTLAVFAVTA--D---GHLTLIQQIS 282 (347)
T ss_dssp TT---TTEE------EEEEEEESSCTTCCSCCEEEEEEEC-TTSCEEEEEEETTTEEEEEEECG--G---GCEEEEEEEE
T ss_pred CC---CCce------EEeeeeeecCCCCCCCCcceeEEEC-CCCCEEEEEeCCCCEEEEEEECC--C---CcEEEeEEEe
Confidence 21 0000 0111111110 00224568999 566 5899988899999999762 1 0122332211
Q ss_pred CeEecccceEEcCCce-EEEEe
Q psy731 437 ATLIYPSDIRVDRTGV-LWVLS 457 (494)
Q Consensus 437 ~~l~~pd~~~id~~g~-Lwvls 457 (494)
..-.+|.++.++++|. ||+..
T Consensus 283 ~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 283 TEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp CSSSCCCEEEECTTSSEEEEEE
T ss_pred cCCCCcCeEEECCCCCEEEEEE
Confidence 1124789999999995 77765
No 59
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.64 E-value=2.6e-06 Score=83.75 Aligned_cols=209 Identities=11% Similarity=0.055 Sum_probs=124.8
Q ss_pred ECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccc
Q psy731 162 DLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFT 241 (494)
Q Consensus 162 dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~ 241 (494)
++.+.+++.++..+ ++..++++| .++.+|++|...+.|.+||.+.+....+.
T Consensus 18 ~~~~~~~~~~~p~~--------~~pegia~~------~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-------------- 69 (306)
T 2p4o_A 18 ELAPAKIITSFPVN--------TFLENLASA------PDGTIFVTNHEVGEIVSITPDGNQQIHAT-------------- 69 (306)
T ss_dssp CCCCEEEEEEECTT--------CCEEEEEEC------TTSCEEEEETTTTEEEEECTTCCEEEEEE--------------
T ss_pred cCCCceEeEeCCCC--------CCcceEEEC------CCCCEEEEeCCCCeEEEECCCCceEEEEe--------------
Confidence 35556677766322 356678886 34569999999999999998764322221
Q ss_pred cCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCC--eEEEEEcCCCcEEEEecCCcccCCCCcceE
Q psy731 242 IGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHN--HIVVYNYRTNDSHIIHHNYLHFDPLFGDFT 319 (494)
Q Consensus 242 i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~--gliVydl~~~~swrv~~~~~~~dP~~~~~~ 319 (494)
.......|++|. ++.+|++|.... .|+++|..+++..++... |. .
T Consensus 70 ------------------~~~~p~gia~~~------dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~-----~~-~--- 116 (306)
T 2p4o_A 70 ------------------VEGKVSGLAFTS------NGDLVATGWNADSIPVVSLVKSDGTVETLLTL-----PD-A--- 116 (306)
T ss_dssp ------------------CSSEEEEEEECT------TSCEEEEEECTTSCEEEEEECTTSCEEEEEEC-----TT-C---
T ss_pred ------------------CCCCceeEEEcC------CCcEEEEeccCCcceEEEEcCCCCeEEEEEeC-----CC-c---
Confidence 112356677763 234899997644 488999888875444321 10 0
Q ss_pred EcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechh----h--cCCCcCccccccceEEecccCCCCCCCe
Q psy731 320 IGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKV----L--QNRSLDFSRSNFDFKVMGSRGTGSQSGA 393 (494)
Q Consensus 320 v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~----L--~~~~~~~~~~~~~v~~~G~~G~~~qs~g 393 (494)
.. .+|++..+. ..+|+.-....++|++.... + .+..+. .....+. .....|
T Consensus 117 ------~~---~~g~~~~~~-----~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~------~~~~~~~---~~~png 173 (306)
T 2p4o_A 117 ------IF---LNGITPLSD-----TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA------RSNSESV---FPAANG 173 (306)
T ss_dssp ------SC---EEEEEESSS-----SEEEEEETTTTEEEEEETTTTEEEEEEECGGGS------CSSTTCC---SCSEEE
T ss_pred ------cc---cCcccccCC-----CcEEEEECCCCeEEEEeCCCCcEeEEEECCccc------cccccCC---CCcCCC
Confidence 01 245665432 36777655444788876531 0 011000 0000011 123455
Q ss_pred EEeeCCCCeEEEeccCCCeEEEEeCCC-CccccccceeeeeecCCeEecccceEEcCCceEEEEe---cCchhh
Q psy731 394 SSLDEETGVIFYALLVKSGVGCWNTFR-GEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS---NKLPVF 463 (494)
Q Consensus 394 ~~~D~~~G~ly~~~~~~~aI~~w~~~~-~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls---nrl~~~ 463 (494)
+ ++..+.||+++...+.|.+++.++ | .+ .+.+++.+ +..|++|.+|++|.|||.. +++.++
T Consensus 174 i--s~dg~~lyv~d~~~~~I~~~~~~~~g-~~--~~~~~~~~----~~~P~gi~vd~dG~l~va~~~~~~V~~~ 238 (306)
T 2p4o_A 174 L--KRFGNFLYVSNTEKMLLLRIPVDSTD-KP--GEPEIFVE----QTNIDDFAFDVEGNLYGATHIYNSVVRI 238 (306)
T ss_dssp E--EEETTEEEEEETTTTEEEEEEBCTTS-CB--CCCEEEEE----SCCCSSEEEBTTCCEEEECBTTCCEEEE
T ss_pred c--CcCCCEEEEEeCCCCEEEEEEeCCCC-CC--CccEEEec----cCCCCCeEECCCCCEEEEeCCCCeEEEE
Confidence 5 434579999999999999999874 2 22 12334433 3589999999999999996 555554
No 60
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.61 E-value=1.5e-05 Score=76.54 Aligned_cols=246 Identities=9% Similarity=0.068 Sum_probs=137.8
Q ss_pred EEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECC--CCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE
Q psy731 128 SVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLR--QQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 128 sV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~--t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
.+..+.++++++ |++.+.+.. +|..|++. ++++...-.++. +. ....++++ .++.++|
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~--------~v~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~s-----~dg~~l~ 99 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEF--------RVLAYRIAPDDGALTFAAESAL-----PG-SLTHISTD-----HQGQFVF 99 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTT--------EEEEEEECTTTCCEEEEEEEEC-----SS-CCSEEEEC-----TTSSEEE
T ss_pred CCceEEECCCCCEEEEeecCCC--------eEEEEEecCCCCceeecccccc-----CC-CCcEEEEc-----CCCCEEE
Confidence 455577777775 888877643 67777776 666443223322 11 44566664 2577899
Q ss_pred EeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 205 IADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 205 ItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
+++...+.|.+||+.++...+... ..........++++. ++.++|++
T Consensus 100 ~~~~~~~~i~~~d~~~~~~~~~~~----------------------------~~~~~~~~~~~~~s~-----dg~~l~~~ 146 (343)
T 1ri6_A 100 VGSYNAGNVSVTRLEDGLPVGVVD----------------------------VVEGLDGCHSANISP-----DNRTLWVP 146 (343)
T ss_dssp EEETTTTEEEEEEEETTEEEEEEE----------------------------EECCCTTBCCCEECT-----TSSEEEEE
T ss_pred EEecCCCeEEEEECCCCccccccc----------------------------cccCCCCceEEEECC-----CCCEEEEe
Confidence 999988999999997554443311 001111234455542 35689999
Q ss_pred cCCCCeEEEEEcCC-CcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeech
Q psy731 285 DSGHNHIVVYNYRT-NDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTK 363 (494)
Q Consensus 285 D~~~~gliVydl~~-~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~ 363 (494)
+.....|.+||+.+ ++.-.+........+ ..+..+++++|+ ++.||+.......+......
T Consensus 147 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~pd----g~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 147 ALKQDRICLFTVSDDGHLVAQDPAEVTTVE--------------GAGPRHMVFHPN----EQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEEEECST--------------TCCEEEEEECTT----SSEEEEEETTTTEEEEEESS
T ss_pred cCCCCEEEEEEecCCCceeeecccccccCC--------------CCCcceEEECCC----CCEEEEEeCCCCEEEEEEec
Confidence 97888999999987 443222100000000 023557999987 36888876444333333221
Q ss_pred hhcCCCcCccccccceEEecc--cC--CCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCC--CCccccccceeeeeecCC
Q psy731 364 VLQNRSLDFSRSNFDFKVMGS--RG--TGSQSGASSLDEETGVIFYALLVKSGVGCWNTF--RGEEYNEKSMGLVAEDNA 437 (494)
Q Consensus 364 ~L~~~~~~~~~~~~~v~~~G~--~G--~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~--~~~~~~~~~~~~v~~d~~ 437 (494)
. ....+ ...+.... .+ ......++++++....||++.-..+.|..|+.+ ++ ....+..-+.
T Consensus 209 ~-~~g~~------~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~------~~~~~~~~~~ 275 (343)
T 1ri6_A 209 D-PHGNI------ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGS------VLSKEGFQPT 275 (343)
T ss_dssp C-TTSCC------EEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC------CEEEEEEEEC
T ss_pred C-CCCcE------EEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCC------ceEEeeeecC
Confidence 0 00110 00111111 00 012233689994334788888888999999987 31 1222221111
Q ss_pred eEecccceEEcCCce-EEEEe
Q psy731 438 TLIYPSDIRVDRTGV-LWVLS 457 (494)
Q Consensus 438 ~l~~pd~~~id~~g~-Lwvls 457 (494)
. ..|.++.++++|. ||+..
T Consensus 276 ~-~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 276 E-TQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp S-SSCCCEEECTTSSEEEEEC
T ss_pred C-CccceEEECCCCCEEEEec
Confidence 1 2388999999885 66665
No 61
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.61 E-value=2e-06 Score=89.93 Aligned_cols=193 Identities=9% Similarity=0.076 Sum_probs=122.0
Q ss_pred ccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccce
Q psy731 186 FSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFS 265 (494)
Q Consensus 186 l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~ 265 (494)
...+++|- ..++++|++|.. +.|.++|++++....+. .......
T Consensus 139 P~~lavdp----~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~-------------------------------~~~~~P~ 182 (430)
T 3tc9_A 139 AVWLSFDP----KNHNHLYLVGEQ-HPTRLIDFEKEYVSTVY-------------------------------SGLSKVR 182 (430)
T ss_dssp CCEEEEET----TEEEEEEEEEBT-EEEEEEETTTTEEEEEE-------------------------------CCCSCEE
T ss_pred CCEEEECC----CCCCeEEEEeCC-CcEEEEECCCCEEEEEe-------------------------------cCCCCcc
Confidence 35666761 025789999998 88999999988776652 1233467
Q ss_pred eeEEeeecCCCCCcEEEEecCCC----CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCC
Q psy731 266 NMVVDVTSANCDDAFLYIADSGH----NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTR 341 (494)
Q Consensus 266 ~i~VD~~~~~c~~~~~YI~D~~~----~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~ 341 (494)
.|++|. ++.++|++|... ..+++++....-.++ ..+.-..+..||+++|+
T Consensus 183 ~ia~d~-----~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~-------------------~~l~~~~~p~giavdp~-- 236 (430)
T 3tc9_A 183 TICWTH-----EADSMIITNDQNNNDRPNNYILTRESGFKVI-------------------TELTKGQNCNGAETHPI-- 236 (430)
T ss_dssp EEEECT-----TSSEEEEEECCSCTTSEEEEEEEGGGTSCSE-------------------EEEEECSSCCCEEECTT--
T ss_pred eEEEeC-----CCCEEEEEeCCCCcccceEEEEeCCCceeee-------------------eeeccCCCceEEEEeCC--
Confidence 788884 356899999743 245556543321100 00111134567999885
Q ss_pred CCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCe-EEEeccCCCeEEEEeCCC
Q psy731 342 DNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGV-IFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 342 ~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~-ly~~~~~~~aI~~w~~~~ 420 (494)
...||+.-+...+++++..+-- .+..+...+......|+++| .+|+ ||+++...+.|.+++.++
T Consensus 237 --~g~lyv~d~~~~~V~~~~~~~~------------~~~~~~~~~~~~~P~gia~~-pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 237 --NGELYFNSWNAGQVFRYDFTTQ------------ETTPLFTIQDSGWEFHIQFH-PSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp --TCCEEEEETTTTEEEEEETTTT------------EEEEEEECSSSSCCEEEEEC-TTSSEEEEEETTTTEEEEEEEET
T ss_pred --CCEEEEEECCCCEEEEEECCCC------------cEEEEEEcCCCCcceeEEEc-CCCCEEEEEECCCCEEEEEeCCc
Confidence 2489999888888888875410 01111222112345789999 6776 999999999999998764
Q ss_pred C-ccccccceeeeeec------------CCeEeccc-ceEE--------cCCceEEEEe
Q psy731 421 G-EEYNEKSMGLVAED------------NATLIYPS-DIRV--------DRTGVLWVLS 457 (494)
Q Consensus 421 ~-~~~~~~~~~~v~~d------------~~~l~~pd-~~~i--------d~~g~Lwvls 457 (494)
. ..+. +..+++.. ..+|..|. ++.+ |.+|.|||.-
T Consensus 302 ~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD 358 (430)
T 3tc9_A 302 KTKRLT--TPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCD 358 (430)
T ss_dssp TTTEEC--CCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEE
T ss_pred cccccc--ceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEE
Confidence 1 0221 12233321 24688999 8998 4679999995
No 62
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.60 E-value=7.2e-06 Score=80.74 Aligned_cols=160 Identities=14% Similarity=0.196 Sum_probs=94.0
Q ss_pred EEEEecCCCCeEEEEEcCCCcE-EEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ce
Q psy731 280 FLYIADSGHNHIVVYNYRTNDS-HIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TE 357 (494)
Q Consensus 280 ~~YI~D~~~~gliVydl~~~~s-wrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~l 357 (494)
..+|++...+.|.+|++..+.. |.+....+..- ...-..|.-|||.+|. ..+||...=.+. .+
T Consensus 82 ~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~-----------~~~~N~g~EGLA~d~~----~~~L~va~E~~p~~i 146 (255)
T 3qqz_A 82 QFVISDERDYAIYVISLTPNSEVKILKKIKIPLQ-----------ESPTNCGFEGLAYSRQ----DHTFWFFKEKNPIEV 146 (255)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEEEECCCS-----------SCCCSSCCEEEEEETT----TTEEEEEEESSSEEE
T ss_pred EEEEEECCCCcEEEEEcCCCCeeeeeeeeccccc-----------cccccCCcceEEEeCC----CCEEEEEECcCCceE
Confidence 4556666666777776655442 33322211100 0011356789999986 358999776655 88
Q ss_pred EeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeec--
Q psy731 358 FAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAED-- 435 (494)
Q Consensus 358 y~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d-- 435 (494)
|.+.. .+....+... ..-...+.. ......|+++||.+|.||+-.-+.+.+...|.++ .. ...-.|-..
T Consensus 147 ~~~~g-~~~~~~l~i~---~~~~~~~~~-~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g--~~--~~~~~L~~g~~ 217 (255)
T 3qqz_A 147 YKVNG-LLSSNELHIS---KDKALQRQF-TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG--EV--IGEMSLTKGSR 217 (255)
T ss_dssp EEEES-TTCSSCCEEE---ECHHHHHTC-CSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC--CE--EEEEECSTTGG
T ss_pred EEEcc-cccCCceeee---cchhhcccc-ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC--CE--EEEEEcCCccC
Confidence 98872 3322222100 000000111 0123579999999999999999999999999987 32 122222211
Q ss_pred --CCeEecccceEEcCCceEEEEe--cCchhh
Q psy731 436 --NATLIYPSDIRVDRTGVLWVLS--NKLPVF 463 (494)
Q Consensus 436 --~~~l~~pd~~~id~~g~Lwvls--nrl~~~ 463 (494)
..++.=|-||++|++|+|||.+ |.|-+|
T Consensus 218 ~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f 249 (255)
T 3qqz_A 218 GLSHNIKQAEGVAMDASGNIYIVSEPNRFYRF 249 (255)
T ss_dssp GCSSCCCSEEEEEECTTCCEEEEETTTEEEEE
T ss_pred CcccccCCCCeeEECCCCCEEEEcCCceEEEE
Confidence 0234568999999999999997 555444
No 63
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.59 E-value=7.4e-06 Score=78.56 Aligned_cols=260 Identities=12% Similarity=0.031 Sum_probs=150.4
Q ss_pred Ceeeeeee-eCCcEEEEecCCC-CC-CCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCC-C
Q psy731 63 CLPVSLDK-WHDRLFLAVPRHK-NG-VPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPC-D 138 (494)
Q Consensus 63 ~~p~gv~v-~~gRlFvt~PR~~-~g-vp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~-~ 138 (494)
..|.++.+ .+|+++++.|.-. .+ ...+|..+..+ ++.++.+..-.. ......+.++.+|.+ +
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~----------~g~~~~~~~~~~----~~~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK----------TGKKTVICKPEV----NGYGGIPAGCQCDRDAN 83 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTT----------TCCEEEEECCEE----TTEECCEEEEEECSSSS
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCC----------CCcEEEEEeccc----CCCCCCCceEEEecCCC
Confidence 35678877 4789999854310 01 11245555432 233433321000 001245788999998 9
Q ss_pred eEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEE-EEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCC-------
Q psy731 139 RLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRF-FQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGH------- 210 (494)
Q Consensus 139 ~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~-~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~------- 210 (494)
+|||.+.+. .|.+||.. +++.+. ...+. ..+....+++++| .++.+|+++...
T Consensus 84 ~l~v~~~~~---------~l~~~d~~-g~~~~~~~~~~~---~~~~~~~~~i~~d------~~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 84 QLFVADMRL---------GLLVVQTD-GTFEEIAKKDSE---GRRMQGCNDCAFD------YEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp EEEEEETTT---------EEEEEETT-SCEEECCSBCTT---SCBCBCCCEEEEC------TTSCEEEEECBCBCTTSCC
T ss_pred cEEEEECCC---------CEEEEeCC-CCEEEEEeccCC---CccccCCcCEEEC------CCCCEEEEecCcccccccc
Confidence 999999753 58999998 776542 22111 1234567888887 456899999875
Q ss_pred --------CeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEE
Q psy731 211 --------NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLY 282 (494)
Q Consensus 211 --------~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~Y 282 (494)
.+|.+||.+ ++..++.. .....+.++++.. .+-++.++|
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~~~~~~-------------------------------~~~~~~~i~~~~~-~d~dg~~l~ 191 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTD-GQMIQVDT-------------------------------AFQFPNGIAVRHM-NDGRPYQLI 191 (314)
T ss_dssp CBTTSSSCEEEEEECTT-SCEEEEEE-------------------------------EESSEEEEEEEEC-TTSCEEEEE
T ss_pred cccccCCCCeEEEECCC-CCEEEecc-------------------------------CCCCcceEEEecc-cCCCCCEEE
Confidence 678888876 66544411 0112355666621 011345899
Q ss_pred EecCCCCeEEEEEcC-CCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeee
Q psy731 283 IADSGHNHIVVYNYR-TNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVT 361 (494)
Q Consensus 283 I~D~~~~gliVydl~-~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~ 361 (494)
++|...++|.+||++ +++. .-.. .+.. +.+..+ ....+|+++++ | .||+....+..++.+.
T Consensus 192 v~~~~~~~i~~~~~~~~g~~-~~~~-~~~~--------~~~~~~---~~p~~i~~d~~---G--~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 192 VAETPTKKLWSYDIKGPAKI-ENKK-VWGH--------IPGTHE---GGADGMDFDED---N--NLLVANWGSSHIEVFG 253 (314)
T ss_dssp EEETTTTEEEEEEEEETTEE-EEEE-EEEE--------CCCCSS---CEEEEEEEBTT---C--CEEEEEETTTEEEEEC
T ss_pred EEECCCCeEEEEECCCCCcc-ccce-EEEE--------CCCCCC---CCCCceEECCC---C--CEEEEEcCCCEEEEEc
Confidence 999988999999987 3321 1000 0000 000000 22567999875 3 7888765555676664
Q ss_pred chhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCe-EEEeccCCCeEEEEeCCC
Q psy731 362 TKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGV-IFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 362 T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~-ly~~~~~~~aI~~w~~~~ 420 (494)
.+ ... .++.+... .....++++| .+|. ||++....+.|.+|+++.
T Consensus 254 ~~---~g~--------~~~~~~~~--~~~~~~i~~~-~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 254 PD---GGQ--------PKMRIRCP--FEKPSNLHFK-PQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TT---CBS--------CSEEEECS--SSCEEEEEEC-TTSSEEEEEETTTTEEEEEECSS
T ss_pred CC---CCc--------EeEEEeCC--CCCceeEEEC-CCCCEEEEEeCCCCeEEEEeCCC
Confidence 32 011 11112211 1345688898 6776 999999889999999864
No 64
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.51 E-value=5.8e-05 Score=76.86 Aligned_cols=298 Identities=9% Similarity=0.021 Sum_probs=152.3
Q ss_pred CCceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 124 RNLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 124 ~~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
++|....+|.++++++|||.|.. . +|.++| .+++ .....+| +.......+.+++++- .-..++++
T Consensus 26 ~~l~~P~~ia~~pdG~l~V~e~~-g--------~I~~~d-~~G~-~~~~~~~--v~~~g~~g~~gia~~p--df~~~g~l 90 (354)
T 3a9g_A 26 SDLEVPWSIAPLGGGRYLVTERP-G--------RLVLIS-PSGK-KLVASFD--VANVGEAGLLGLALHP--EFPKKSWV 90 (354)
T ss_dssp CSCSCEEEEEEEETTEEEEEETT-T--------EEEEEC-SSCE-EEEEECC--CCCSTTCSEEEEEECT--TTTTSCEE
T ss_pred CCCCCCeEEEEcCCCeEEEEeCC-C--------EEEEEe-CCCc-eEeeccc--eeecCCCceeeEEeCC--CCCcCCEE
Confidence 46888999999999999999987 3 788887 4555 2222344 1233456788888863 11236899
Q ss_pred EEeeCC---C----CeEEEEEccCCceeEEecCccccCCCCCccccCCccceeee-ecccccccccccceeeEEeeecCC
Q psy731 204 YIADSG---H----NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQ-LKEKTDYTEESKFSNMVVDVTSAN 275 (494)
Q Consensus 204 YItDs~---~----~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~-l~~~~~~~~~s~~~~i~VD~~~~~ 275 (494)
||+++. . ..|..|+++.+.. +++. ...+++ ++ .........|+++.
T Consensus 91 yv~~~~~~~~~~~~~~v~r~~~~~~~~-~~~~-----------------~~~l~~~~~----~~~~h~~~~l~~~p---- 144 (354)
T 3a9g_A 91 YLYASYFAEGGHIRNRVIRGRLDGSTF-KLKE-----------------VKTLIDGIP----GAYIHNGGRIRFGP---- 144 (354)
T ss_dssp EEEEEEECGGGCEEEEEEEEEECSSSC-CEEE-----------------EEEEEEEEE----CCSSCCCCCEEECT----
T ss_pred EEEEeccCCCCCcceEEEEEEECCCCc-CcCc-----------------cEEEEEcCC----CCCCcCCceEEECC----
Confidence 999874 3 5788888765521 0000 000111 10 00112345677763
Q ss_pred CCCcEEEEecCCCCeE-EEEE--cCCCcEEEEecCCcccCCCCcceEEcCEEeee-ecceeeeeeccCCCCCceeEEEee
Q psy731 276 CDDAFLYIADSGHNHI-VVYN--YRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQW-QTGIHGMSLSPLTRDNFRVMYFHP 351 (494)
Q Consensus 276 c~~~~~YI~D~~~~gl-iVyd--l~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~-~~Gi~gIaLsp~~~~g~r~LYf~p 351 (494)
++.+||++-..... ...| ...++.+|+.-..--| ....| ...+-+.+ .-...||+++|+ ...||++-
T Consensus 145 --DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p--~~npf-~~~~i~a~G~rnp~Gla~d~~----~g~l~v~d 215 (354)
T 3a9g_A 145 --DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP--ADNPF-PNSPIWSYGHRNPQGIDWHRA----SGVMVATE 215 (354)
T ss_dssp --TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC--TTSSS-TTCCEEEECCSCCCEEEECTT----TCCEEEEE
T ss_pred --CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC--CCCCC-CCCcEEEEccCCcceEEEeCC----CCCEEEEe
Confidence 45799986321100 0000 0123445554221111 00000 00111110 123568999884 24788865
Q ss_pred CCCcc---eEeeechh-hc----CCCcCccccccceEEecccCCCCCCCeEEe-------eCCCCeEEEeccCCCeEEEE
Q psy731 352 LASTT---EFAVTTKV-LQ----NRSLDFSRSNFDFKVMGSRGTGSQSGASSL-------DEETGVIFYALLVKSGVGCW 416 (494)
Q Consensus 352 lss~~---ly~V~T~~-L~----~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~-------D~~~G~ly~~~~~~~aI~~w 416 (494)
..... +..|..-. .- ............+..++.. .....|+++ + -.|.||+++...+.|.+.
T Consensus 216 ~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~--~~ap~G~~~y~g~~fp~-~~G~l~v~~~~~~~v~~~ 292 (354)
T 3a9g_A 216 HGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSE--TWAPSGASFVHGDMFPG-LRGWLLIACLRGSMLAAV 292 (354)
T ss_dssp CCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTC--CCCEEEEEECCSSSCGG-GTTEEEEEETTTTEEEEE
T ss_pred cCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCC--CcCCcceEEECCCCCcc-cCCcEEEEEcCCCEEEEE
Confidence 54432 33332100 00 0000000011122233221 234677888 5 689999999999999999
Q ss_pred eCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEecCchhhhcCCCCCCcccEEEEEEec
Q psy731 417 NTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLSNKLPVFLYSKLKPEDINVRIFKSTV 482 (494)
Q Consensus 417 ~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvlsnrl~~~~~~~~~~~~~nfrI~r~~~ 482 (494)
+.++.-.. ...+.+..+ ...-|.++.+++||.|||+++.-. +.-......=||||+..
T Consensus 293 ~~~~~g~~--~~~~~~~~~--~~~rp~~v~~~pDG~lyv~~~~~~----G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 293 NFGDNMEV--RKISTFFKN--VFGRLRDVVIDDDGGILISTSNRD----GRGSLRAGDDKILKIVS 350 (354)
T ss_dssp EECGGGCE--EEEEEECTT--TSCCEEEEEECTTSCEEEEECTTS----SSSCCCTTCSCEEEEEE
T ss_pred EECCCCcc--cceeeeccC--CCCCeeEEEECCCCcEEEEEeCCC----CCcCCCCCCCEEEEEec
Confidence 98751011 011223322 123488999999999999985321 11112223347888764
No 65
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.51 E-value=4.3e-05 Score=75.54 Aligned_cols=214 Identities=15% Similarity=0.202 Sum_probs=135.7
Q ss_pred eEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEc
Q psy731 139 RLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNY 218 (494)
Q Consensus 139 ~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~ 218 (494)
.|++...... .|.+||+.++++++.+.... ....+.+. .++.++|++.+..+.|.+||+
T Consensus 3 ~l~vs~~~d~--------~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s-----~dg~~l~~~~~~d~~i~v~d~ 61 (391)
T 1l0q_A 3 FAYIANSESD--------NISVIDVTSNKVTATIPVGS--------NPMGAVIS-----PDGTKVYVANAHSNDVSIIDT 61 (391)
T ss_dssp EEEEEETTTT--------EEEEEETTTTEEEEEEECSS--------SEEEEEEC-----TTSSEEEEEEGGGTEEEEEET
T ss_pred EEEEEcCCCC--------EEEEEECCCCeEEEEeecCC--------CcceEEEC-----CCCCEEEEECCCCCeEEEEEC
Confidence 4566665554 79999999999988776544 23444443 356789999998899999999
Q ss_pred cCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcC
Q psy731 219 RTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYR 297 (494)
Q Consensus 219 ~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~ 297 (494)
.+++..+. .+ ......+++.. ++.++|++......|.+||++
T Consensus 62 ~~~~~~~~~~~--------------------------------~~~v~~~~~sp-----dg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 62 ATNNVIATVPA--------------------------------GSSPQGVAVSP-----DGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp TTTEEEEEEEC--------------------------------SSSEEEEEECT-----TSSEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEEEC--------------------------------CCCccceEECC-----CCCEEEEEECCCCEEEEEECC
Confidence 98876554 11 11234455542 467889998888899999999
Q ss_pred CCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCcccccc
Q psy731 298 TNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNF 377 (494)
Q Consensus 298 ~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~ 377 (494)
+++..+.... ..++.+++++|+ ++.||+..-....++....+- .. .
T Consensus 105 ~~~~~~~~~~--------------------~~~~~~~~~s~d----g~~l~~~~~~~~~v~~~d~~~---~~-----~-- 150 (391)
T 1l0q_A 105 SNTVAGTVKT--------------------GKSPLGLALSPD----GKKLYVTNNGDKTVSVINTVT---KA-----V-- 150 (391)
T ss_dssp TTEEEEEEEC--------------------SSSEEEEEECTT----SSEEEEEETTTTEEEEEETTT---TE-----E--
T ss_pred CCeEEEEEeC--------------------CCCcceEEECCC----CCEEEEEeCCCCEEEEEECCC---Cc-----E--
Confidence 8875443321 123567999987 368888765555555554321 11 1
Q ss_pred ceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCc-eEEEE
Q psy731 378 DFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTG-VLWVL 456 (494)
Q Consensus 378 ~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g-~Lwvl 456 (494)
+..+. .+ ....++++++....||++.-..+.|..||..+++. ...+... ..+.++.+.++| .||+.
T Consensus 151 -~~~~~-~~--~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-----~~~~~~~----~~~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 151 -INTVS-VG--RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV-----IDTVKVE----AAPSGIAVNPEGTKAYVT 217 (391)
T ss_dssp -EEEEE-CC--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-----EEEEECS----SEEEEEEECTTSSEEEEE
T ss_pred -EEEEe-cC--CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE-----EEEEecC----CCccceEECCCCCEEEEE
Confidence 11111 11 12357888854447888888889999999987421 1222221 245667777766 46665
Q ss_pred e
Q psy731 457 S 457 (494)
Q Consensus 457 s 457 (494)
+
T Consensus 218 ~ 218 (391)
T 1l0q_A 218 N 218 (391)
T ss_dssp E
T ss_pred e
Confidence 5
No 66
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.49 E-value=6.6e-05 Score=75.29 Aligned_cols=225 Identities=13% Similarity=0.099 Sum_probs=139.9
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+....++++|+...... .|.+||+++++.++++... ......+.++- ++.++|+++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~--------~v~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~~l~~~~ 230 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQAN--------AVHVFDLKTLAYKATVDLT-------GKWSKILLYDP-----IRDLVYCSN 230 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGT--------EEEEEETTTCCEEEEEECS-------SSSEEEEEEET-----TTTEEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCC--------EEEEEECCCceEEEEEcCC-------CCCeeEEEEcC-----CCCEEEEEe
Confidence 566677778888888876554 7999999999998877632 23445566542 577899999
Q ss_pred CCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC-
Q psy731 208 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS- 286 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~- 286 (494)
...+.|.+||+.+++..+.- ........+.++. ++.++|++..
T Consensus 231 ~~~~~i~~~d~~~~~~~~~~-------------------------------~~~~~~~~~~~~~-----~g~~l~~~~~~ 274 (433)
T 3bws_A 231 WISEDISVIDRKTKLEIRKT-------------------------------DKIGLPRGLLLSK-----DGKELYIAQFS 274 (433)
T ss_dssp TTTTEEEEEETTTTEEEEEC-------------------------------CCCSEEEEEEECT-----TSSEEEEEEEE
T ss_pred cCCCcEEEEECCCCcEEEEe-------------------------------cCCCCceEEEEcC-----CCCEEEEEECC
Confidence 98999999999988764331 0111233444442 3457777664
Q ss_pred ------CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEee
Q psy731 287 ------GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAV 360 (494)
Q Consensus 287 ------~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V 360 (494)
.+..|.+||+.+++..+... ...++.+++++|+ ++.||+..-....++..
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~--------------------~~~~~~~~~~~~~----g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIG--------------------PPGNKRHIVSGNT----ENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEE--------------------EEECEEEEEECSS----TTEEEEEETTTTEEEEE
T ss_pred CCccccCCCeEEEEECCCCcEEeecc--------------------CCCCcceEEECCC----CCEEEEEecCCCEEEEE
Confidence 34578899998775433220 1123567899886 36788875544455444
Q ss_pred echhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCC-eEEEeccCCC--------------eEEEEeCCCCcccc
Q psy731 361 TTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETG-VIFYALLVKS--------------GVGCWNTFRGEEYN 425 (494)
Q Consensus 361 ~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G-~ly~~~~~~~--------------aI~~w~~~~~~~~~ 425 (494)
..+ ... .++.+... ....+++++ .+| .||.+....+ .|..||..+++.
T Consensus 331 d~~---~~~--------~~~~~~~~---~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~-- 393 (433)
T 3bws_A 331 DLK---EKK--------VQKSIPVF---DKPNTIALS-PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV-- 393 (433)
T ss_dssp ETT---TTE--------EEEEEECS---SSEEEEEEC-TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE--
T ss_pred ECC---CCc--------EEEEecCC---CCCCeEEEc-CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE--
Confidence 332 111 11122211 234578898 455 6888776643 899999977421
Q ss_pred ccceeeeeecCCeEecccceEEcCCce-EEEE
Q psy731 426 EKSMGLVAEDNATLIYPSDIRVDRTGV-LWVL 456 (494)
Q Consensus 426 ~~~~~~v~~d~~~l~~pd~~~id~~g~-Lwvl 456 (494)
...+... ..|.++.+.++|. |++.
T Consensus 394 ---~~~~~~~----~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 394 ---KEFWEAG----NQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp ---EEEEECS----SSEEEEEECTTSCEEEEE
T ss_pred ---EEEecCC----CCCceEEEcCCCCEEEEE
Confidence 1222221 3578889988885 4444
No 67
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.46 E-value=1.2e-05 Score=78.27 Aligned_cols=190 Identities=11% Similarity=0.154 Sum_probs=118.4
Q ss_pred CccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccc
Q psy731 185 KFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKF 264 (494)
Q Consensus 185 ~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~ 264 (494)
+...++.|- +++.+|++|...+.|.+||.+++....+.. ....
T Consensus 14 ~~Egp~w~~-----~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~--------------------------------~~~~ 56 (297)
T 3g4e_A 14 CGESPVWEE-----VSNSLLFVDIPAKKVCRWDSFTKQVQRVTM--------------------------------DAPV 56 (297)
T ss_dssp BEEEEEEET-----TTTEEEEEETTTTEEEEEETTTCCEEEEEC--------------------------------SSCE
T ss_pred cccCCeEEC-----CCCEEEEEECCCCEEEEEECCCCcEEEEeC--------------------------------CCce
Confidence 334555542 568899999999999999999887654421 1123
Q ss_pred eeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCc
Q psy731 265 SNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNF 344 (494)
Q Consensus 265 ~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~ 344 (494)
..++++. ++. +|++. ..+|.+||.++++.-.+.... .++ + ...++.|+++|+ |
T Consensus 57 ~~i~~~~-----dG~-l~v~~--~~~l~~~d~~~g~~~~~~~~~--~~~----------~---~~~~~di~~d~d---G- 109 (297)
T 3g4e_A 57 SSVALRQ-----SGG-YVATI--GTKFCALNWKEQSAVVLATVD--NDK----------K---NNRFNDGKVDPA---G- 109 (297)
T ss_dssp EEEEEBT-----TSS-EEEEE--TTEEEEEETTTTEEEEEEECC--TTC----------S---SEEEEEEEECTT---S-
T ss_pred EEEEECC-----CCC-EEEEE--CCeEEEEECCCCcEEEEEecC--CCC----------C---CCCCCCEEECCC---C-
Confidence 4566653 223 67775 579999999988755543321 000 0 012567899876 3
Q ss_pred eeEEEeeCCC-----------cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeE
Q psy731 345 RVMYFHPLAS-----------TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGV 413 (494)
Q Consensus 345 r~LYf~plss-----------~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI 413 (494)
.||+..+.. ..+|++... ... ....... ..+.|+++++....||+++...+.|
T Consensus 110 -~l~~~~~~~~~~~~~~~~~~~~l~~~d~~----g~~--------~~~~~~~---~~pngi~~spdg~~lyv~~~~~~~i 173 (297)
T 3g4e_A 110 -RYFAGTMAEETAPAVLERHQGALYSLFPD----HHV--------KKYFDQV---DISNGLDWSLDHKIFYYIDSLSYSV 173 (297)
T ss_dssp -CEEEEEEECCSBTTBCCTTCEEEEEECTT----SCE--------EEEEEEE---SBEEEEEECTTSCEEEEEEGGGTEE
T ss_pred -CEEEecCCcccccccccCCCcEEEEEECC----CCE--------EEEeecc---ccccceEEcCCCCEEEEecCCCCcE
Confidence 488876532 367777542 110 0111111 2356899994444799999999999
Q ss_pred EEEeC--CCCccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 414 GCWNT--FRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 414 ~~w~~--~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
.+|+. .+| .+ .+.++++.-......|+++.+|++|.|||..
T Consensus 174 ~~~~~d~~~G-~~--~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 174 DAFDYDLQTG-QI--SNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp EEEEECTTTC-CE--EEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred EEEeccCCCC-cc--cCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 99985 333 22 1223443322223579999999999999996
No 68
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.46 E-value=1.4e-05 Score=77.67 Aligned_cols=193 Identities=12% Similarity=0.099 Sum_probs=119.1
Q ss_pred CccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccc
Q psy731 185 KFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKF 264 (494)
Q Consensus 185 ~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~ 264 (494)
.+..+++| .++.+|++|...++|.+||.++++..++.. ......
T Consensus 46 ~~~~~~~~------~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~------------------------------~~~~~~ 89 (333)
T 2dg1_A 46 QLEGLNFD------RQGQLFLLDVFEGNIFKINPETKEIKRPFV------------------------------SHKANP 89 (333)
T ss_dssp CEEEEEEC------TTSCEEEEETTTCEEEEECTTTCCEEEEEE------------------------------CSSSSE
T ss_pred cccCcEEC------CCCCEEEEECCCCEEEEEeCCCCcEEEEee------------------------------CCCCCc
Confidence 44556665 345599999999999999999998776621 011234
Q ss_pred eeeEEeeecCCCCCcEEEEecCCC----CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCC
Q psy731 265 SNMVVDVTSANCDDAFLYIADSGH----NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLT 340 (494)
Q Consensus 265 ~~i~VD~~~~~c~~~~~YI~D~~~----~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~ 340 (494)
..+++|. ++.+|+++... .+|.+||.++++..++.... .+ ...+.+|+++|+
T Consensus 90 ~~i~~~~------dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~--------------~~~~~~i~~d~~- 145 (333)
T 2dg1_A 90 AAIKIHK------DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL---ST--------------AYCIDDMVFDSK- 145 (333)
T ss_dssp EEEEECT------TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS---SS--------------CCCEEEEEECTT-
T ss_pred ceEEECC------CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC---cc--------------CCcccceEECCC-
Confidence 5566662 34578887766 78999999988765443211 01 023667999875
Q ss_pred CCCceeEEEeeCC------CcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCC-eEEEeccCCCeE
Q psy731 341 RDNFRVMYFHPLA------STTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETG-VIFYALLVKSGV 413 (494)
Q Consensus 341 ~~g~r~LYf~pls------s~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G-~ly~~~~~~~aI 413 (494)
| .+|+.... ...+|++..+- ..++.+... .....+++++ .+| .||+++...+.|
T Consensus 146 --g--~l~v~~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~--~~~~~~i~~~-~dg~~l~v~~~~~~~i 206 (333)
T 2dg1_A 146 --G--GFYFTDFRGYSTNPLGGVYYVSPDF------------RTVTPIIQN--ISVANGIALS-TDEKVLWVTETTANRL 206 (333)
T ss_dssp --S--CEEEEECCCBTTBCCEEEEEECTTS------------CCEEEEEEE--ESSEEEEEEC-TTSSEEEEEEGGGTEE
T ss_pred --C--CEEEEeccccccCCCceEEEEeCCC------------CEEEEeecC--CCcccceEEC-CCCCEEEEEeCCCCeE
Confidence 2 68887654 24677775320 011111111 1235678999 566 599999888999
Q ss_pred EEEeCCC-CccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 414 GCWNTFR-GEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 414 ~~w~~~~-~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
.+|+.++ |..+....-.+...- .....|+++.+|++|.|||.+
T Consensus 207 ~~~d~~~~g~~~~~~~~~~~~~~-~~~~~~~~i~~d~~G~l~v~~ 250 (333)
T 2dg1_A 207 HRIALEDDGVTIQPFGATIPYYF-TGHEGPDSCCIDSDDNLYVAM 250 (333)
T ss_dssp EEEEECTTSSSEEEEEEEEEEEC-CSSSEEEEEEEBTTCCEEEEE
T ss_pred EEEEecCCCcCcccccceEEEec-CCCCCCCceEECCCCCEEEEE
Confidence 9999853 111110000111111 112478999999999999997
No 69
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.43 E-value=6.8e-05 Score=76.02 Aligned_cols=276 Identities=9% Similarity=0.048 Sum_probs=142.7
Q ss_pred CCceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 124 RNLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 124 ~~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
++|....++.++++++|||.|.. . +|.+++ +++......++ +.......+..++++- .--.++++
T Consensus 28 ~~l~~P~~ia~~pdG~l~V~e~~-g--------~I~~i~--~g~~~~~~~~~--v~~~g~~~p~gia~~p--df~~~g~l 92 (352)
T 2ism_A 28 GGLEVPWALAFLPDGGMLIAERP-G--------RIRLFR--EGRLSTYAELS--VYHRGESGLLGLALHP--RFPQEPYV 92 (352)
T ss_dssp CCCSCEEEEEECTTSCEEEEETT-T--------EEEEEE--TTEEEEEEECC--CCCSTTCSEEEEEECT--TTTTSCEE
T ss_pred CCCCCceEEEEcCCCeEEEEeCC-C--------eEEEEE--CCCccEeecce--EeecCCCCceeEEECC--CCCCCCEE
Confidence 45778889999999999999986 3 788888 44433223344 2334567788888862 11125799
Q ss_pred EEeeCCC-----CeEEEEEccCCceeEEecCccccCCCCCccccCCccceeee-ecccccccccccceeeEEeeecCCCC
Q psy731 204 YIADSGH-----NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQ-LKEKTDYTEESKFSNMVVDVTSANCD 277 (494)
Q Consensus 204 YItDs~~-----~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~-l~~~~~~~~~s~~~~i~VD~~~~~c~ 277 (494)
||+++.. ..|..|+++.++.-.. ..+++ ++. ..........|+++.
T Consensus 93 Yv~~~~~~~~~~~~v~r~~~~~~~~~~~--------------------~~l~~~~p~--~~~~~h~~~~l~~~p------ 144 (352)
T 2ism_A 93 YAYRTVAEGGLRNQVVRLRHLGERGVLD--------------------RVVLDGIPA--RPHGLHSGGRIAFGP------ 144 (352)
T ss_dssp EEEEEECTTSSEEEEEEEEECSSCEEEE--------------------EEEEEEECC--CTTCCCCCCCEEECT------
T ss_pred EEEEecCCCCCccEEEEEEeCCCCcCce--------------------EEEEEeCCC--CCCCCcCCceEEECC------
Confidence 9999864 6799998876532110 00111 110 000112345677773
Q ss_pred CcEEEEecCCCCeE-EEEEc--CCCcEEEEecCCccc--CCC------CcceEEcCEEeeeecceeeeeeccCCCCCcee
Q psy731 278 DAFLYIADSGHNHI-VVYNY--RTNDSHIIHHNYLHF--DPL------FGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRV 346 (494)
Q Consensus 278 ~~~~YI~D~~~~gl-iVydl--~~~~swrv~~~~~~~--dP~------~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~ 346 (494)
++++|+++-..... ..-|. ..++.+|+.-..--| .|- .......|. -...||+++|+ ...
T Consensus 145 dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-----rnp~g~a~d~~----~g~ 215 (352)
T 2ism_A 145 DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-----RNPQGLAWHPK----TGE 215 (352)
T ss_dssp TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-----SEECCCEECTT----TCC
T ss_pred CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-----CCcccEEEECC----CCC
Confidence 46899997321100 00000 113444443221000 010 001111111 12567999885 247
Q ss_pred EEEeeCCCcc--------eEeeechh-hcCCCc----CccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeE
Q psy731 347 MYFHPLASTT--------EFAVTTKV-LQNRSL----DFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGV 413 (494)
Q Consensus 347 LYf~plss~~--------ly~V~T~~-L~~~~~----~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI 413 (494)
||..-..... +..|..-. .--+.. ........+..+. +.....|+++- +|.+|+++...+.|
T Consensus 216 l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~---~~~ap~G~~~~--~G~l~v~~~~~~~v 290 (352)
T 2ism_A 216 LFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP---QGFPPGNLAFF--RGDLYVAGLRGQAL 290 (352)
T ss_dssp EEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT---TCCCEEEEEEE--TTEEEEEETTTTEE
T ss_pred EEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC---CCCCCcceEEE--CCEEEEEECCCCEE
Confidence 8886544433 33332110 000000 0000111112221 12345688884 79999999999999
Q ss_pred EEEeCCCCc-cccccceeeeeecCCeEecccceEEcCCceEEEEecC
Q psy731 414 GCWNTFRGE-EYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLSNK 459 (494)
Q Consensus 414 ~~w~~~~~~-~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvlsnr 459 (494)
.+.+.++.. .+.......+... +.-|.++.+++||.|||+++.
T Consensus 291 ~~v~~~~~~~~~~~~~~~~~~~~---~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 291 LRLVLEGERGRWRVLRVETALSG---FGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp EEEEEEEETTEEEEEEEEEEEES---SCCEEEEEECTTSCEEEEECS
T ss_pred EEEEECCCCcceeecchheeccc---CCCeeEEEECCCCcEEEEEeC
Confidence 999876410 1100001222211 234889999999999999864
No 70
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.42 E-value=0.00067 Score=66.68 Aligned_cols=250 Identities=13% Similarity=0.162 Sum_probs=133.8
Q ss_pred EEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEE--EEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE
Q psy731 128 SVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQ--VYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 128 sV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv--~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
++..+.++++++ |++.+.... ....+. .+|..++++...-.++. .......+.+ ++.++|
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~-----~~~~v~~~~~~~~~g~~~~~~~~~~-----~~~~p~~~~~-------dg~~l~ 113 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSK-----DQAAVSAFAFDKEKGTLHLLNTQKT-----MGADPCYLTT-------NGKNIV 113 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSS-----TTCEEEEEEEETTTTEEEEEEEEEC-----SSSCEEEEEE-------CSSEEE
T ss_pred CCceEEECCCCCEEEEEEccCC-----CCCcEEEEEEeCCCCcEEEeeEecc-----CCCCcEEEEE-------CCCEEE
Confidence 344466777775 777766311 011444 44555566544333332 2222333443 467899
Q ss_pred EeeCCCCeEEEEEccCCc-eeEEe----cCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCc
Q psy731 205 IADSGHNHIVVYNYRTND-SHIIH----HNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDA 279 (494)
Q Consensus 205 ItDs~~~~iIVyd~~~~~-~~rv~----~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~ 279 (494)
+++...+.+.+||+.++. ..++. +....+.| ..........++++. +..
T Consensus 114 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~---------------------~~~~~~~~~~~~~sp-----dg~ 167 (361)
T 3scy_A 114 TANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDK---------------------ERQTMPHLHCVRITP-----DGK 167 (361)
T ss_dssp EEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCT---------------------TTCSSCCEEEEEECT-----TSS
T ss_pred EEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCc---------------------cccCCCcceEEEECC-----CCC
Confidence 999999999999997543 22221 11110110 001112234456652 467
Q ss_pred EEEEecCCCCeEEEEEcCCCcE------EEEe-c-CCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEee
Q psy731 280 FLYIADSGHNHIVVYNYRTNDS------HIIH-H-NYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHP 351 (494)
Q Consensus 280 ~~YI~D~~~~gliVydl~~~~s------wrv~-~-~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~p 351 (494)
++|+++.+...+.+|++..+.. .... . ... ......+..++++||+ ++.||+..
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~~~~~~~~~~~spd----g~~l~v~~ 229 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF--------------KVAPGSGPRHLIFNSD----GKFAYLIN 229 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE--------------ECCTTCCEEEEEECTT----SSEEEEEE
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce--------------ecCCCCCCeEEEEcCC----CCEEEEEc
Confidence 8999999889999998875431 1100 0 000 0001134567999997 37899976
Q ss_pred C-CCc-ceEeeechhhcCCCcCccccccceEEecc-cCCCCCCCeEEeeCCCC-eEEEeccC-CCeEEEEeCC--CCccc
Q psy731 352 L-AST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGS-RGTGSQSGASSLDEETG-VIFYALLV-KSGVGCWNTF--RGEEY 424 (494)
Q Consensus 352 l-ss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~-~G~~~qs~g~~~D~~~G-~ly~~~~~-~~aI~~w~~~--~~~~~ 424 (494)
. .+. .+|.+.+..++ .++.+.. .+......+++++ .+| .||++.-. .+.|..|+.+ +| .
T Consensus 230 ~~~~~v~v~~~~~g~~~-----------~~~~~~~~~~~~~~~~~i~~s-pdg~~l~v~~~~~~~~i~v~~~~~~~g-~- 295 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLD-----------EIQTVAADTVNAQGSGDIHLS-PDGKYLYASNRLKADGVAIFKVDETNG-T- 295 (361)
T ss_dssp TTTCEEEEEEEETTEEE-----------EEEEEESCSSCCCCEEEEEEC-TTSSEEEEEECSSSCEEEEEEECTTTC-C-
T ss_pred CCCCeEEEEEecCCceE-----------EeEEEecCCCCCCCcccEEEC-CCCCEEEEECCCCCCEEEEEEEcCCCC-c-
Confidence 4 332 44554432221 1111111 0001123578999 566 58888877 7899999875 32 1
Q ss_pred cccceeeeeecCCeEecccceEEcCCce-EEEEe
Q psy731 425 NEKSMGLVAEDNATLIYPSDIRVDRTGV-LWVLS 457 (494)
Q Consensus 425 ~~~~~~~v~~d~~~l~~pd~~~id~~g~-Lwvls 457 (494)
...+..-.. =.+|.++.++++|. ||+..
T Consensus 296 ----~~~~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 296 ----LTKVGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp ----EEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred ----EEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence 222221111 14789999999985 77664
No 71
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.42 E-value=7.2e-05 Score=76.98 Aligned_cols=258 Identities=12% Similarity=0.120 Sum_probs=139.2
Q ss_pred eeeeeee-eCCcEEEEecCCCCCCC-------ceeEEEEccCCCCCCCCCCCCccccCCCcc--cccccCCCceEEeeEE
Q psy731 64 LPVSLDK-WHDRLFLAVPRHKNGVP-------STLNYVMLPNSNNKNKSITSPILMPYPSWE--SNVREARNLTSVVKVQ 133 (494)
Q Consensus 64 ~p~gv~v-~~gRlFvt~PR~~~gvp-------~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~--~n~~~~~~lvsV~~i~ 133 (494)
=|.++++ .+|++|++.--|.+|.+ ..+..+..++. +++.+....-. ++ ..--.+.++.
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~--------~~~~~~l~~~g~~~~----~~~f~PhGi~ 118 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEK--------EPAVSELEIIGNTLD----ISSFNPHGIS 118 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSS--------SCCEEECEEECSSCC----GGGCCEEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCC--------CCceEEEEccCCCCC----cCceeeeeeE
Confidence 3566666 58999999866666543 34666664421 12222111100 11 1123667776
Q ss_pred EcC----CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC
Q psy731 134 SDP----CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG 209 (494)
Q Consensus 134 iD~----~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~ 209 (494)
+.. ..+|||+|.+... ..-.|+.+|..++.+...-.+.. .+-...||+++|- ++-.|+|+..
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~----s~ielf~~d~~~~~~~~~~~~~g----~~~~~pND~~v~~------~G~fyvt~~~ 184 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSS----STVEVFKFQEEEKSLLHLKTIRH----KLLPSVNDIVAVG------PEHFYATNDH 184 (355)
T ss_dssp EEECTTCCEEEEEEECSTTC----CEEEEEEEETTTTEEEEEEEECC----TTCSSEEEEEEEE------TTEEEEEESC
T ss_pred EEECCCCcEEEEEEECCCCC----CeEEEEEEECCCCEEEEEecccc----CCCCCCceEEEeC------CCCEEecCCc
Confidence 633 3479999998531 12267888887765443333332 2456789999984 5667777652
Q ss_pred -----------------CCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeee
Q psy731 210 -----------------HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVT 272 (494)
Q Consensus 210 -----------------~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~ 272 (494)
.++|+.||. ++..++ ...-...|+|+++.
T Consensus 185 ~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~-------------------------------~~~l~~pNGia~sp- 230 (355)
T 3sre_A 185 YFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVV-------------------------------AEGFDFANGINISP- 230 (355)
T ss_dssp SCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEE-------------------------------EEEESSEEEEEECT-
T ss_pred EeCCcccccchhhccCCccEEEEEEC--CeEEEe-------------------------------ecCCcccCcceECC-
Confidence 234555543 222222 11223467888873
Q ss_pred cCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeC
Q psy731 273 SANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPL 352 (494)
Q Consensus 273 ~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pl 352 (494)
++.++|++|+..+.|.+|++..+... .. .+.|......+||++++. +| .||....
T Consensus 231 ----Dg~~lYvadt~~~~I~~~~~~~~g~l--~~---------------~~~~~~~g~PDGi~vD~e--~G--~lwva~~ 285 (355)
T 3sre_A 231 ----DGKYVYIAELLAHKIHVYEKHANWTL--TP---------------LRVLSFDTLVDNISVDPV--TG--DLWVGCH 285 (355)
T ss_dssp ----TSSEEEEEEGGGTEEEEEEECTTSCE--EE---------------EEEEECSSEEEEEEECTT--TC--CEEEEEE
T ss_pred ----CCCEEEEEeCCCCeEEEEEECCCCcE--ec---------------CEEEeCCCCCceEEEeCC--CC--cEEEEec
Confidence 46799999999999999998743211 11 011222234677999762 13 5776332
Q ss_pred -CCc-------------ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEE
Q psy731 353 -AST-------------TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGC 415 (494)
Q Consensus 353 -ss~-------------~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~ 415 (494)
.+. .+++|... + + + -..--+.+.+.|..-++...++ +.+|.||+|-+-...+.|
T Consensus 286 ~~g~~v~~~~P~~~~~s~v~rI~~~-~-----~-~-~~~v~~v~~ddG~~l~~~T~a~-~~~g~L~iGsv~~~~l~c 353 (355)
T 3sre_A 286 PNGMRIFFYDAENPPGSEVLRIQDI-L-----S-E-EPKVTVVYAENGTVLQGSTVAA-VYKGKLLIGTVFHKALYC 353 (355)
T ss_dssp SCHHHHHSCCTTSCCCEEEEEEECT-T-----S-S-SCEEEEEEEECSSSCCSEEEEE-EETTEEEEEESSSCEEEE
T ss_pred CCceEEEEECCCCCCCCEEEEEEcc-C-----C-C-CcEEEEEEEcCCCEEEeeEEEE-EECCEEEEEEcCCCceec
Confidence 322 33344321 0 0 0 1122334445553333223333 367999999998888877
No 72
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.40 E-value=0.00015 Score=69.58 Aligned_cols=195 Identities=8% Similarity=0.047 Sum_probs=122.0
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.+.++.+|++++|||.+.+.. .|.+||++++++........ ..+....+++++| .++.+|+||
T Consensus 70 ~~~~l~~~~dg~l~v~~~~~~--------~i~~~d~~~g~~~~~~~~~~---~~~~~~~~~i~~d------~~G~l~vtd 132 (296)
T 3e5z_A 70 HQNGHCLNKQGHLIACSHGLR--------RLERQREPGGEWESIADSFE---GKKLNSPNDVCLA------PDGSLWFSD 132 (296)
T ss_dssp SEEEEEECTTCCEEEEETTTT--------EEEEECSTTCCEEEEECEET---TEECCCCCCEEEC------TTSCEEEEE
T ss_pred CcceeeECCCCcEEEEecCCC--------eEEEEcCCCCcEEEEeeccC---CCCCCCCCCEEEC------CCCCEEEEC
Confidence 467889999999999998866 79999999998754332211 1234567889987 466799998
Q ss_pred CC-----------------CCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEe
Q psy731 208 SG-----------------HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVD 270 (494)
Q Consensus 208 s~-----------------~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD 270 (494)
+. .++|..||.. ++..++.. .....+.++++
T Consensus 133 ~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-------------------------------~~~~~~gi~~s 180 (296)
T 3e5z_A 133 PTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR-------------------------------DRVKPNGLAFL 180 (296)
T ss_dssp CSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC-------------------------------CCSSEEEEEEC
T ss_pred CccccccccccccccccCCCcEEEEECCC-CCEEEeec-------------------------------CCCCCccEEEC
Confidence 72 3477777766 55544421 11224566665
Q ss_pred eecCCCCCcEEEEecCCCCeEEEEEcC-CCcE---EEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCcee
Q psy731 271 VTSANCDDAFLYIADSGHNHIVVYNYR-TNDS---HIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRV 346 (494)
Q Consensus 271 ~~~~~c~~~~~YI~D~~~~gliVydl~-~~~s---wrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~ 346 (494)
. +...+ ++|.....|.+||+. +++. .++. .. . ....+||+++++ | .
T Consensus 181 ~-----dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~-~-----------------~~~p~~i~~d~~---G--~ 230 (296)
T 3e5z_A 181 P-----SGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TV-E-----------------PGKTDGLRVDAG---G--L 230 (296)
T ss_dssp T-----TSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CC-S-----------------SSCCCSEEEBTT---S--C
T ss_pred C-----CCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eC-C-----------------CCCCCeEEECCC---C--C
Confidence 3 34556 899888999999987 3432 1221 10 0 123567999875 3 6
Q ss_pred EEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEee-CCCCeEEEeccCCCeEEEEeCCC
Q psy731 347 MYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLD-EETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 347 LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D-~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
||... +..++.+..+ . +.++.+... .. ...++++ +..+.||.+.- +++.++++++
T Consensus 231 l~v~~--~~~v~~~~~~----g--------~~~~~~~~~--~~-~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~ 286 (296)
T 3e5z_A 231 IWASA--GDGVHVLTPD----G--------DELGRVLTP--QT-TSNLCFGGPEGRTLYMTVS--TEFWSIETNV 286 (296)
T ss_dssp EEEEE--TTEEEEECTT----S--------CEEEEEECS--SC-CCEEEEESTTSCEEEEEET--TEEEEEECSC
T ss_pred EEEEc--CCeEEEECCC----C--------CEEEEEECC--CC-ceeEEEECCCCCEEEEEcC--CeEEEEEccc
Confidence 88877 3456555421 1 112222211 12 4566774 34558999864 6999999987
No 73
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.39 E-value=1.5e-05 Score=76.92 Aligned_cols=74 Identities=9% Similarity=0.068 Sum_probs=56.5
Q ss_pred EEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCe
Q psy731 133 QSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNH 212 (494)
Q Consensus 133 ~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~ 212 (494)
.....+++||...+.. +|.+||+.++++++++.++. ......++++ .++.++|++....+.
T Consensus 6 ~~~~~~~~~v~~~~~~--------~v~~~d~~~~~~~~~~~~~~------~~~~~~~~~s-----~dg~~~~v~~~~~~~ 66 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYPN--------NLHVVDVASDTVYKSCVMPD------KFGPGTAMMA-----PDNRTAYVLNNHYGD 66 (349)
T ss_dssp CCCTTCEEEEEEETTT--------EEEEEETTTTEEEEEEECSS------CCSSCEEEEC-----TTSSEEEEEETTTTE
T ss_pred cccCCCEEEEEeCCCC--------eEEEEECCCCcEEEEEecCC------CCCCceeEEC-----CCCCEEEEEeCCCCc
Confidence 3446778899887766 89999999999999888765 1123455553 245789999999999
Q ss_pred EEEEEccCCceeE
Q psy731 213 IVVYNYRTNDSHI 225 (494)
Q Consensus 213 iIVyd~~~~~~~r 225 (494)
|.+||+.+++..+
T Consensus 67 i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 67 IYGIDLDTCKNTF 79 (349)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEeCCCCcEEE
Confidence 9999999887643
No 74
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.36 E-value=0.00015 Score=69.44 Aligned_cols=236 Identities=12% Similarity=0.113 Sum_probs=131.7
Q ss_pred EEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECC---CCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 128 SVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLR---QQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 128 sV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~---t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
.+..+.++++++ |++.+.+.. .|.+||+. +.+.++.+.. ......++++- +..++
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~--------~i~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~s~-----dg~~l 143 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAG--------NVSVTRLEDGLPVGVVDVVEG--------LDGCHSANISP-----DNRTL 143 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTT--------EEEEEEEETTEEEEEEEEECC--------CTTBCCCEECT-----TSSEE
T ss_pred CCcEEEEcCCCCEEEEEecCCC--------eEEEEECCCCccccccccccC--------CCCceEEEECC-----CCCEE
Confidence 456677777776 777776544 78888884 3344444332 23455666642 56789
Q ss_pred EEeeCCCCeEEEEEccC-CceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEE
Q psy731 204 YIADSGHNHIVVYNYRT-NDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLY 282 (494)
Q Consensus 204 YItDs~~~~iIVyd~~~-~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~Y 282 (494)
|+++.+.+.|.+||+.+ ++...+..... ....+.....++++. +..++|
T Consensus 144 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~p-----dg~~l~ 193 (343)
T 1ri6_A 144 WVPALKQDRICLFTVSDDGHLVAQDPAEV-------------------------TTVEGAGPRHMVFHP-----NEQYAY 193 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEEE-------------------------ECSTTCCEEEEEECT-----TSSEEE
T ss_pred EEecCCCCEEEEEEecCCCceeeeccccc-------------------------ccCCCCCcceEEECC-----CCCEEE
Confidence 99998889999999988 66544320000 011122344555543 457899
Q ss_pred EecCCCCeEEEEEcCC--CcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc--ceE
Q psy731 283 IADSGHNHIVVYNYRT--NDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST--TEF 358 (494)
Q Consensus 283 I~D~~~~gliVydl~~--~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~--~ly 358 (494)
+++.....+.+||+.. ++..........+.. +.-...+.+|+++|+ ++.||+..-... .+|
T Consensus 194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~i~~s~d----g~~l~v~~~~~~~i~v~ 258 (343)
T 1ri6_A 194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPEN-----------FSDTRWAADIHITPD----GRHLYACDRTASLITVF 258 (343)
T ss_dssp EEETTTTEEEEEESSCTTSCCEEEEEEECSCTT-----------CCSCCCEEEEEECTT----SSEEEEEETTTTEEEEE
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEeeccccCcc-----------ccccCCccceEECCC----CCEEEEEecCCCEEEEE
Confidence 9998888999999953 332212111101100 000123456999987 368887654333 444
Q ss_pred eeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCC-eEEEeccCCCeEEEE--eCCCCccccccceeeeeec
Q psy731 359 AVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETG-VIFYALLVKSGVGCW--NTFRGEEYNEKSMGLVAED 435 (494)
Q Consensus 359 ~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G-~ly~~~~~~~aI~~w--~~~~~~~~~~~~~~~v~~d 435 (494)
.+..+ ... ...+..+... ....+++++ .+| .||++.-..+.|..| |+.+| . ...+..-
T Consensus 259 d~~~~---~~~------~~~~~~~~~~---~~~~~~~~s-~dg~~l~~~~~~~~~v~v~~~d~~~g-~-----~~~~~~~ 319 (343)
T 1ri6_A 259 SVSED---GSV------LSKEGFQPTE---TQPRGFNVD-HSGKYLIAAGQKSHHISVYEIVGEQG-L-----LHEKGRY 319 (343)
T ss_dssp EECTT---SCC------EEEEEEEECS---SSCCCEEEC-TTSSEEEEECTTTCEEEEEEEETTTT-E-----EEEEEEE
T ss_pred EEcCC---CCc------eEEeeeecCC---CccceEEEC-CCCCEEEEecCCCCeEEEEEEcCCCc-e-----eeEcccc
Confidence 44310 000 0111112111 125678999 456 588888888999999 55553 2 2233221
Q ss_pred CCeEecccceEEcC
Q psy731 436 NATLIYPSDIRVDR 449 (494)
Q Consensus 436 ~~~l~~pd~~~id~ 449 (494)
+. -..|.++.+.+
T Consensus 320 ~~-g~~p~~i~~~~ 332 (343)
T 1ri6_A 320 AV-GQGPMWVVVNA 332 (343)
T ss_dssp EC-SSSCCEEEEEE
T ss_pred cc-CCCCeeEEEEc
Confidence 11 14677777754
No 75
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.36 E-value=0.00015 Score=69.16 Aligned_cols=216 Identities=10% Similarity=0.000 Sum_probs=125.8
Q ss_pred EeeEEEcCCC-eEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 129 VVKVQSDPCD-RLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 129 V~~i~iD~~~-~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
+..+.+++++ .||+.+.... .|.+||+.++++++++.++.. .........++++- ++.++|+++
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~--------~v~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~-----dg~~l~~~~ 100 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSE--------SLVKIDLVTGETLGRIDLSTP--EERVKSLFGAALSP-----DGKTLAIYE 100 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTT--------EEEEEETTTCCEEEEEECCBT--TEEEECTTCEEECT-----TSSEEEEEE
T ss_pred ccceEEcCCCCEEEEEeCCCC--------eEEEEECCCCCeEeeEEcCCc--ccccccccceEECC-----CCCEEEEEe
Confidence 4566788877 6888886554 799999999999998887540 00112345666642 566899996
Q ss_pred C-----------CCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCC
Q psy731 208 S-----------GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANC 276 (494)
Q Consensus 208 s-----------~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c 276 (494)
. ..+.|.+||+.+++..+.-. .+.....++++.
T Consensus 101 ~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-------------------------------~~~~~~~~~~s~----- 144 (337)
T 1pby_B 101 SPVRLELTHFEVQPTRVALYDAETLSRRKAFE-------------------------------APRQITMLAWAR----- 144 (337)
T ss_dssp EEEEECSSCEEECCCEEEEEETTTTEEEEEEE-------------------------------CCSSCCCEEECT-----
T ss_pred cccccccccccccCceEEEEECCCCcEEEEEe-------------------------------CCCCcceeEECC-----
Confidence 3 34789999998887644310 011223344432
Q ss_pred CCcEEEEecCCCCeEEEEEcCCCcEEEEec-C----CcccCCCCcceEEc------------------------------
Q psy731 277 DDAFLYIADSGHNHIVVYNYRTNDSHIIHH-N----YLHFDPLFGDFTIG------------------------------ 321 (494)
Q Consensus 277 ~~~~~YI~D~~~~gliVydl~~~~swrv~~-~----~~~~dP~~~~~~v~------------------------------ 321 (494)
++.++|+++ ..|.+||+++++..+... . .....|....+.+.
T Consensus 145 dg~~l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 145 DGSKLYGLG---RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TSSCEEEES---SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCEEEEeC---CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 356788883 569999999887654432 1 11112211111000
Q ss_pred -------CEE----ee-eecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCC
Q psy731 322 -------GVN----FQ-WQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGS 389 (494)
Q Consensus 322 -------G~~----f~-~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~ 389 (494)
|+. +. ...++.+++++|+ ++.||.. ...++.+..+-. +.++.+. .+ .
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d----g~~l~~~---~~~v~~~d~~~~-----------~~~~~~~-~~--~ 280 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPA----KTRAFGA---YNVLESFDLEKN-----------ASIKRVP-LP--H 280 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTT----SSEEEEE---ESEEEEEETTTT-----------EEEEEEE-CS--S
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCC----CCEEEEe---CCeEEEEECCCC-----------cCcceec-CC--C
Confidence 000 00 0124567999987 3678887 335555543211 0111111 11 2
Q ss_pred CCCeEEeeCCCC-eEEEeccCCCeEEEEeCCCC
Q psy731 390 QSGASSLDEETG-VIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 390 qs~g~~~D~~~G-~ly~~~~~~~aI~~w~~~~~ 421 (494)
...+++++ .+| .||.+ -..+.|.+||..++
T Consensus 281 ~~~~~~~s-~dg~~l~~~-~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 281 SYYSVNVS-TDGSTVWLG-GALGDLAAYDAETL 311 (337)
T ss_dssp CCCEEEEC-TTSCEEEEE-SBSSEEEEEETTTC
T ss_pred ceeeEEEC-CCCCEEEEE-cCCCcEEEEECcCC
Confidence 35678999 566 57777 55789999999874
No 76
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.34 E-value=6.3e-05 Score=75.45 Aligned_cols=230 Identities=12% Similarity=0.067 Sum_probs=140.8
Q ss_pred eeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC
Q psy731 130 VKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG 209 (494)
Q Consensus 130 ~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~ 209 (494)
..+..++.+++++...... .|.+||+.++++++.+..+. ..........+++. .++.+|++.+.
T Consensus 126 ~~~~~s~~~~~~~~~~~~~--------~i~~~d~~~g~~~~~~~~~~--~~~~~~~v~~~~~~------~~~~~~~s~~~ 189 (433)
T 3bws_A 126 KSVRFIDNTRLAIPLLEDE--------GMDVLDINSGQTVRLSPPEK--YKKKLGFVETISIP------EHNELWVSQMQ 189 (433)
T ss_dssp CCCEESSSSEEEEEBTTSS--------SEEEEETTTCCEEEECCCHH--HHTTCCEEEEEEEG------GGTEEEEEEGG
T ss_pred eEEEEeCCCeEEEEeCCCC--------eEEEEECCCCeEeeecCccc--ccccCCceeEEEEc------CCCEEEEEECC
Confidence 3556667777888765443 69999999999887554322 11233344555552 45779999999
Q ss_pred CCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCC
Q psy731 210 HNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGH 288 (494)
Q Consensus 210 ~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~ 288 (494)
.+.|.+||+++++..+. .. .......++++. ++.++|+++..+
T Consensus 190 d~~v~~~d~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~-----~~~~l~~~~~~~ 233 (433)
T 3bws_A 190 ANAVHVFDLKTLAYKATVDL-------------------------------TGKWSKILLYDP-----IRDLVYCSNWIS 233 (433)
T ss_dssp GTEEEEEETTTCCEEEEEEC-------------------------------SSSSEEEEEEET-----TTTEEEEEETTT
T ss_pred CCEEEEEECCCceEEEEEcC-------------------------------CCCCeeEEEEcC-----CCCEEEEEecCC
Confidence 99999999998776443 11 111234455542 457889998888
Q ss_pred CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC-------cceEeee
Q psy731 289 NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS-------TTEFAVT 361 (494)
Q Consensus 289 ~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss-------~~ly~V~ 361 (494)
..|.+||+++++.-+.... ..++.+++++|+ ++.||.....+ ..++..+
T Consensus 234 ~~i~~~d~~~~~~~~~~~~--------------------~~~~~~~~~~~~----g~~l~~~~~~~~~~~~~dg~i~~~d 289 (433)
T 3bws_A 234 EDISVIDRKTKLEIRKTDK--------------------IGLPRGLLLSKD----GKELYIAQFSASNQESGGGRLGIYS 289 (433)
T ss_dssp TEEEEEETTTTEEEEECCC--------------------CSEEEEEEECTT----SSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred CcEEEEECCCCcEEEEecC--------------------CCCceEEEEcCC----CCEEEEEECCCCccccCCCeEEEEE
Confidence 8999999988764322111 123567999987 36788765422 1222322
Q ss_pred chhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEec
Q psy731 362 TKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIY 441 (494)
Q Consensus 362 T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~ 441 (494)
.+ .. +.++.++.. ....++++++....||++....+.|..||.+++.. ...+... ..
T Consensus 290 ~~---~~--------~~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~-----~~~~~~~----~~ 346 (433)
T 3bws_A 290 MD---KE--------KLIDTIGPP---GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV-----QKSIPVF----DK 346 (433)
T ss_dssp TT---TT--------EEEEEEEEE---ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE-----EEEEECS----SS
T ss_pred CC---CC--------cEEeeccCC---CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE-----EEEecCC----CC
Confidence 21 11 112222222 12456888843337999989999999999987421 1222221 34
Q ss_pred ccceEEcCCce-EEEEec
Q psy731 442 PSDIRVDRTGV-LWVLSN 458 (494)
Q Consensus 442 pd~~~id~~g~-Lwvlsn 458 (494)
|.++.+.++|. ||+.+.
T Consensus 347 ~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 347 PNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEEEECTTSSEEEEEEC
T ss_pred CCeEEEcCCCCEEEEEec
Confidence 67888888884 777653
No 77
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.32 E-value=0.00022 Score=69.65 Aligned_cols=268 Identities=14% Similarity=0.099 Sum_probs=146.1
Q ss_pred CCCeeeeeee-eCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCe
Q psy731 61 ENCLPVSLDK-WHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDR 139 (494)
Q Consensus 61 ~~~~p~gv~v-~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~ 139 (494)
...-|.++++ .+|++|++--.. -..++..+..+. +.++..-.. ......+..+.++++++
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~----------g~~~~~~~~------~~~~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDG----------QTAHKLNTV------VAPGTPPAYVAVDEARQ 98 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEET----------TEEEEEEEE------EEESCCCSEEEEETTTT
T ss_pred ccCCcceEEEccCCeEEEEEecC---CCceEEEEEecC----------CcEEEeeee------ecCCCCCEEEEECCCCC
Confidence 3455777887 478887776431 123455544322 122111000 00123455677888776
Q ss_pred -EEEEeCCCCCCCCCCCCEEEEEECC-CCcE--EEEEEcCCCcc--ccccCCccceEEEeecCCCCCcEEEEeeCCCCeE
Q psy731 140 -LWALDSGVVEGKMEQPPSVQVYDLR-QQMQ--IRFFQLKEKTD--YTEESKFSNMVVDVTSANCDNAFLYIADSGHNHI 213 (494)
Q Consensus 140 -LwvlD~G~~~~~~~~~Pklv~~dl~-t~~v--i~~~~lp~~~~--~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~i 213 (494)
|++.+.+.. .+.+||+. ++++ +.++....... ....+....++++- +.. +|++|.+.+.|
T Consensus 99 ~l~~~~~~~~--------~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-----dg~-l~v~~~~~~~v 164 (347)
T 3hfq_A 99 LVYSANYHKG--------TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-----DNR-LAVIDLGSDKV 164 (347)
T ss_dssp EEEEEETTTT--------EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-----TSC-EEEEETTTTEE
T ss_pred EEEEEeCCCC--------EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-----CCc-EEEEeCCCCEE
Confidence 777775544 68888885 3333 33333221000 00122344555542 333 99999999999
Q ss_pred EEEEcc-CCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEE
Q psy731 214 VVYNYR-TNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIV 292 (494)
Q Consensus 214 IVyd~~-~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gli 292 (494)
.+||+. +|+...+... ....+.....++++. +..++|+++.....+.
T Consensus 165 ~~~~~~~~g~~~~~~~~---------------------------~~~~g~~p~~~~~sp-----dg~~l~v~~~~~~~v~ 212 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVL---------------------------TMEAGFGPRHLVFSP-----DGQYAFLAGELSSQIA 212 (347)
T ss_dssp EEEEECTTSCEEEEEEE---------------------------ECCTTCCEEEEEECT-----TSSEEEEEETTTTEEE
T ss_pred EEEEECCCCcEEEeeeE---------------------------EcCCCCCCceEEECC-----CCCEEEEEeCCCCEEE
Confidence 999998 6655444210 011222345566653 4578999999899999
Q ss_pred EEEcCC--CcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc--ceEeeechhhcCC
Q psy731 293 VYNYRT--NDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST--TEFAVTTKVLQNR 368 (494)
Q Consensus 293 Vydl~~--~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~--~ly~V~T~~L~~~ 368 (494)
||++.. ++...+..-...+. . +.-..+..+|++||+ +++||....... .+|.+... .
T Consensus 213 v~~~~~~~g~~~~~~~~~~~~~--~---------~~~~~~~~~i~~spd----G~~l~v~~~~~~~v~v~~~~~~----g 273 (347)
T 3hfq_A 213 SLKYDTQTGAFTQLGIVKTIPA--D---------YTAHNGAAAIRLSHD----GHFLYVSNRGYNTLAVFAVTAD----G 273 (347)
T ss_dssp EEEEETTTTEEEEEEEEESSCT--T---------CCSCCEEEEEEECTT----SCEEEEEEETTTEEEEEEECGG----G
T ss_pred EEEecCCCCceEEeeeeeecCC--C---------CCCCCcceeEEECCC----CCEEEEEeCCCCEEEEEEECCC----C
Confidence 999874 44322222111110 0 000124677999997 378998654332 55555321 1
Q ss_pred CcCccccccceEEecccCCCCCCCeEEeeCCCC-eEEEeccCCCeEEEE--eCCCC
Q psy731 369 SLDFSRSNFDFKVMGSRGTGSQSGASSLDEETG-VIFYALLVKSGVGCW--NTFRG 421 (494)
Q Consensus 369 ~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G-~ly~~~~~~~aI~~w--~~~~~ 421 (494)
.+ ..++.+...| ....+++++ .+| .||++.-..+.|..| |+.+|
T Consensus 274 ~~------~~~~~~~~~~--~~~~~~~~s-pdg~~l~v~~~~~~~v~v~~~d~~tg 320 (347)
T 3hfq_A 274 HL------TLIQQISTEG--DFPRDFDLD-PTEAFVVVVNQNTDNATLYARDLTSG 320 (347)
T ss_dssp CE------EEEEEEECSS--SCCCEEEEC-TTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred cE------EEeEEEecCC--CCcCeEEEC-CCCCEEEEEEcCCCcEEEEEEeCCCC
Confidence 10 1111111111 235689999 566 699998888999999 66553
No 78
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=2.4e-05 Score=83.92 Aligned_cols=205 Identities=12% Similarity=0.137 Sum_probs=123.0
Q ss_pred CcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEE-------eee
Q psy731 200 NAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVV-------DVT 272 (494)
Q Consensus 200 ~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~V-------D~~ 272 (494)
+..+||++...++|.++|++++....+-.... .....+..|++ |.
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~---------------------------~~~~~p~~ia~~~~~~~~d~- 202 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINT---------------------------IPTNRIRSIAFNKKIEGYAD- 202 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTT---------------------------SSCSBEEEEEECCCBTTTBC-
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCc---------------------------cccCCCcEEEEeecccccCC-
Confidence 67899999988899999999998877621000 01124677777 53
Q ss_pred cCCCCCcEEEEecCCC------CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCcee
Q psy731 273 SANCDDAFLYIADSGH------NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRV 346 (494)
Q Consensus 273 ~~~c~~~~~YI~D~~~------~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~ 346 (494)
+..++|++|-.+ +++++++.+.+..| ..-+.. -.+. .+ .+-.||+++|+ .+.
T Consensus 203 ----~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~-------~~~~~~--~~v~--~~---~~p~giavdp~----~g~ 260 (496)
T 3kya_A 203 ----EAEYMIVAIDYDGKGDESPSVYIIKRNADGTF-------DDRSDI--QLIA--AY---KQCNGATIHPI----NGE 260 (496)
T ss_dssp ----TTCEEEEEECCCTTGGGEEEEEEEECCTTSCC-------STTSCE--EEEE--EE---SCCCCEEECTT----TCC
T ss_pred ----CCCEEEEEeCCCCCcccCceEEEEecCCCCce-------eecccc--eeec--cC---CCceEEEEcCC----CCe
Confidence 345899999775 34777764431111 100000 0111 12 24577999886 369
Q ss_pred EEEeeCCCcceEeeechh----hcCCCc-Cc--cccccceEEecccCCCCCCCeEEeeCCCCe-EEEeccCCCeEEEEeC
Q psy731 347 MYFHPLASTTEFAVTTKV----LQNRSL-DF--SRSNFDFKVMGSRGTGSQSGASSLDEETGV-IFYALLVKSGVGCWNT 418 (494)
Q Consensus 347 LYf~plss~~ly~V~T~~----L~~~~~-~~--~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~-ly~~~~~~~aI~~w~~ 418 (494)
||+.-....++|++..+. ..++.+ .. ......++.+...+..+..-++++| ..|+ ||+++...+.|.+++.
T Consensus 261 LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~-p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 261 LYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIH-PTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEEC-TTSSEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEc-CCCCEEEEEeCCCCEEEEEec
Confidence 999988888899998761 112222 00 0000012222222222334689999 6776 9999999999999776
Q ss_pred CCCc-cccccceeeeeec------------CCeEeccc-ceEEc-------CCceEEEEe
Q psy731 419 FRGE-EYNEKSMGLVAED------------NATLIYPS-DIRVD-------RTGVLWVLS 457 (494)
Q Consensus 419 ~~~~-~~~~~~~~~v~~d------------~~~l~~pd-~~~id-------~~g~Lwvls 457 (494)
++.. .+. +..+++-. ..+|..|. ++.++ .+|.|||.-
T Consensus 340 dg~~~~~~--~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD 397 (496)
T 3kya_A 340 DEIKKEFI--TPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVD 397 (496)
T ss_dssp ETTTTEEC--CCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEE
T ss_pred CCCcceec--ccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEE
Confidence 5400 110 11233321 24788999 88887 688999984
No 79
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.28 E-value=0.00031 Score=69.13 Aligned_cols=217 Identities=14% Similarity=0.165 Sum_probs=119.7
Q ss_pred eEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEE----EEEcCCCcc---ccccCCccceEEEeecCCCCCcEE
Q psy731 131 KVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIR----FFQLKEKTD---YTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 131 ~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~----~~~lp~~~~---~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
.+.+ ....|++.+.+.. .+.+|++.++..+. ......... -...+....++++ .+..++
T Consensus 104 ~~~~-dg~~l~~~~~~~~--------~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s-----pdg~~l 169 (361)
T 3scy_A 104 YLTT-NGKNIVTANYSGG--------SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT-----PDGKYL 169 (361)
T ss_dssp EEEE-CSSEEEEEETTTT--------EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC-----TTSSEE
T ss_pred EEEE-CCCEEEEEECCCC--------EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC-----CCCCEE
Confidence 3344 3446777776554 67888887553321 111111000 0012233445554 267789
Q ss_pred EEeeCCCCeEEEEEccCCce------eEEe-cCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCC
Q psy731 204 YIADSGHNHIVVYNYRTNDS------HIIH-HNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANC 276 (494)
Q Consensus 204 YItDs~~~~iIVyd~~~~~~------~rv~-~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c 276 (494)
|+++.+.+.|.||++..+.. .... ... . .....+.....++++.
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~------------------~------~~~~~~~~~~~~~~sp----- 220 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPE------------------A------FKVAPGSGPRHLIFNS----- 220 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE------------------E------EECCTTCCEEEEEECT-----
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeeccccc------------------c------eecCCCCCCeEEEEcC-----
Confidence 99999999999999886542 1100 000 0 0011223345566653
Q ss_pred CCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC-C-
Q psy731 277 DDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA-S- 354 (494)
Q Consensus 277 ~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls-s- 354 (494)
+..++|+++.....|.|||+.+++.-.+..-...+.. ..+..+|++||+ +++||..... .
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~--------------~~~~~~i~~spd----g~~l~v~~~~~~~ 282 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN--------------AQGSGDIHLSPD----GKYLYASNRLKAD 282 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC--------------CCCEEEEEECTT----SSEEEEEECSSSC
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC--------------CCCcccEEECCC----CCEEEEECCCCCC
Confidence 4578999998888999999987654333221111110 123467999997 3789986654 2
Q ss_pred -cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCC-eEEEeccCCCeEEE--EeCCCC
Q psy731 355 -TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETG-VIFYALLVKSGVGC--WNTFRG 421 (494)
Q Consensus 355 -~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G-~ly~~~~~~~aI~~--w~~~~~ 421 (494)
-.+|.+..+ +..+ ..+..+.. | ....+++++ .+| .||++....+.|.. ||+.+|
T Consensus 283 ~i~v~~~~~~---~g~~------~~~~~~~~-g--~~~~~~~~s-pdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 283 GVAIFKVDET---NGTL------TKVGYQLT-G--IHPRNFIIT-PNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp EEEEEEECTT---TCCE------EEEEEEEC-S--SCCCEEEEC-TTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred EEEEEEEcCC---CCcE------EEeeEecC-C--CCCceEEEC-CCCCEEEEEECCCCCEEEEEEECCCC
Confidence 256666421 1110 11111111 2 235689999 566 58998878888887 565553
No 80
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.24 E-value=0.00012 Score=77.07 Aligned_cols=254 Identities=11% Similarity=-0.034 Sum_probs=143.2
Q ss_pred CeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC---------
Q psy731 138 DRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS--------- 208 (494)
Q Consensus 138 ~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs--------- 208 (494)
.++||.+.+.... . -.|.++|+.|++++.++.... .. .++++ .++.++|++++
T Consensus 85 ~~vyV~n~~~~~~---~-~~VsVID~~t~~vv~~I~vG~--------~P-gia~S-----pDgk~lyVan~~~~~~~~G~ 146 (426)
T 3c75_H 85 RRVYIQDPAHFAA---I-TQQFVIDGSTGRILGMTDGGF--------LP-HPVAA-----EDGSFFAQASTVFERIARGK 146 (426)
T ss_dssp TEEEEEECTTTCS---S-EEEEEEETTTTEEEEEEEECS--------SC-EEEEC-----TTSSCEEEEEEEEEETTEEE
T ss_pred CEEEEECCCcCCC---C-CeEEEEECCCCEEEEEEECCC--------CC-ceEEC-----CCCCEEEEEeccccccccCC
Confidence 5899999875310 0 389999999999999998765 12 56664 37889999996
Q ss_pred CCCeEEEEEccCCceeE-EecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 209 GHNHIVVYNYRTNDSHI-IHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~r-v~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
..+.|-|+|..+++.-+ |. +.|.. .. ..+.....++++. +..++|+++..
T Consensus 147 ~~~~VsviD~~t~~vv~~I~--------------v~g~~---------r~-~~g~~P~~~~~sp-----DGk~lyV~n~~ 197 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIE--------------LPDAP---------RF-LVGTYQWMNALTP-----DNKNLLFYQFS 197 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEE--------------ETTCC---------CC-CBSCCGGGSEECT-----TSSEEEEEECS
T ss_pred CCCEEEEEECCCCcEEEEEE--------------CCCcc---------cc-ccCCCcceEEEcC-----CCCEEEEEecC
Confidence 35689999999987643 21 00000 00 0012234566653 46899999875
Q ss_pred -CCeEEEEEcCCCcEE-EEecCC---cccCCCC--cceEEcCEEeee---------------ecce----eeeeeccCCC
Q psy731 288 -HNHIVVYNYRTNDSH-IIHHNY---LHFDPLF--GDFTIGGVNFQW---------------QTGI----HGMSLSPLTR 341 (494)
Q Consensus 288 -~~gliVydl~~~~sw-rv~~~~---~~~dP~~--~~~~v~G~~f~~---------------~~Gi----~gIaLsp~~~ 341 (494)
.+.|.|+|.++++.- ++.-.. ..|+... ..+.-+|+.... ..+- ..++++++
T Consensus 198 ~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~d-- 275 (426)
T 3c75_H 198 PAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLR-- 275 (426)
T ss_dssp SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTT--
T ss_pred CCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCC--
Confidence 678999999998753 222111 1111000 000001111100 0000 11233444
Q ss_pred CCceeEEEeeCCCcceEeeechhhcCCCcCccccccceE-------EecccCCCCCCCeEEeeCCCCeEEEeccC-----
Q psy731 342 DNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFK-------VMGSRGTGSQSGASSLDEETGVIFYALLV----- 409 (494)
Q Consensus 342 ~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~-------~~G~~G~~~qs~g~~~D~~~G~ly~~~~~----- 409 (494)
.+.+||.+..+ ++|.+..+- .... ....++ ..|.+. .....+++++..+.||.+.-+
T Consensus 276 --g~~~~~~s~~g-~V~ViD~~~---~~~~---v~~~~~~~~~~~i~~g~~p--~g~~~va~s~dg~rlyVa~~~~~~gt 344 (426)
T 3c75_H 276 --SGRLVWPTYTG-KIFQADLTA---EGAT---FRAPIEALTEAERADDWRP--GGWQQTAYHRQSDRIYLLVDQRDEWK 344 (426)
T ss_dssp --TCEEEEEBTTS-EEEEEEECS---SCEE---ECCCEESSCTTTGGGTEEE--CSSSCEEEEGGGTEEEEEEEECCTTC
T ss_pred --CCEEEEEeCCC-cEEEEeccC---CceE---Eeeeeeecccccccccccc--CCceeeEEcCCCCEEEEEeccccccc
Confidence 25777777755 677776521 0000 000111 112220 112348899666799998752
Q ss_pred ----CCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCce-EEEEecCc
Q psy731 410 ----KSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGV-LWVLSNKL 460 (494)
Q Consensus 410 ----~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~-Lwvlsnrl 460 (494)
.+.|...|+.+++ -+..+--. ..|.++.++++|. +++.+|..
T Consensus 345 hk~~s~~VsVID~~T~k-----vv~~I~vg----~~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 345 HKAASRFVVVLNAETGE-----RINKIELG----HEIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp TTSCEEEEEEEETTTCC-----EEEEEEEE----EEECEEEECCSSSCEEEEEETT
T ss_pred ccCCCCEEEEEECCCCe-----EEEEEECC----CCcCeEEEccCCCEEEEEEcCC
Confidence 3579999998731 12222221 3699999999997 77777754
No 81
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.24 E-value=6.3e-05 Score=73.29 Aligned_cols=196 Identities=9% Similarity=0.078 Sum_probs=117.7
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.+.++..|.+++||+.+.+.. .|.+||.. +++.....-.. ..+....+++++| .++.+|+||
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~--------~v~~~~~~-g~~~~~~~~~~---~~~~~~~~~i~~d------~dG~l~~td 148 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRR--------AITRSDAD-GQAHLLVGRYA---GKRLNSPNDLIVA------RDGAIWFTD 148 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTT--------EEEEECTT-SCEEEEECEET---TEECSCCCCEEEC------TTSCEEEEC
T ss_pred ccceeeECCCCCEEEEECCCC--------EEEEECCC-CCEEEEEeccC---CCccCCCCCEEEC------CCCCEEEeC
Confidence 366788999999999998876 79999986 66432211111 1123457889997 467799998
Q ss_pred CC-----------------CCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEe
Q psy731 208 SG-----------------HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVD 270 (494)
Q Consensus 208 s~-----------------~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD 270 (494)
+. ..+|..||.++++..++. .....+.++++
T Consensus 149 ~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--------------------------------~~~~p~gl~~s 196 (305)
T 3dr2_A 149 PPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--------------------------------DLDHPNGLAFS 196 (305)
T ss_dssp CSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--------------------------------EESSEEEEEEC
T ss_pred cCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--------------------------------cCCCCcceEEc
Confidence 62 357888888888776652 11124556665
Q ss_pred eecCCCCCcEEEEecCCC-----CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCce
Q psy731 271 VTSANCDDAFLYIADSGH-----NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFR 345 (494)
Q Consensus 271 ~~~~~c~~~~~YI~D~~~-----~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r 345 (494)
. +...+|++|... ..|.+||+.++. +.+.....+.. ....+||+++++ |
T Consensus 197 p-----dg~~lyv~~~~~~~~~~~~i~~~~~~~~~---l~~~~~~~~~~-------------~~~pdgi~~d~~---G-- 250 (305)
T 3dr2_A 197 P-----DEQTLYVSQTPEQGHGSVEITAFAWRDGA---LHDRRHFASVP-------------DGLPDGFCVDRG---G-- 250 (305)
T ss_dssp T-----TSSEEEEEECCC---CCCEEEEEEEETTE---EEEEEEEECCS-------------SSCCCSEEECTT---S--
T ss_pred C-----CCCEEEEEecCCcCCCCCEEEEEEecCCC---ccCCeEEEECC-------------CCCCCeEEECCC---C--
Confidence 3 456899999873 789999988664 21111000000 112466999875 3
Q ss_pred eEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeC
Q psy731 346 VMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNT 418 (494)
Q Consensus 346 ~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~ 418 (494)
.||...- ..++.+..+ .. .++.+... .....++++++.+.||++.- +++++++.
T Consensus 251 ~lwv~~~--~gv~~~~~~----g~--------~~~~~~~~---~~~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 251 WLWSSSG--TGVCVFDSD----GQ--------LLGHIPTP---GTASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp CEEECCS--SEEEEECTT----SC--------EEEEEECS---SCCCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred CEEEecC--CcEEEECCC----CC--------EEEEEECC---CceeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 4888652 235554321 11 11112111 12456777745568888764 57877764
No 82
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.20 E-value=0.00031 Score=75.35 Aligned_cols=208 Identities=7% Similarity=0.013 Sum_probs=132.0
Q ss_pred EcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeE
Q psy731 134 SDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHI 213 (494)
Q Consensus 134 iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~i 213 (494)
+|.+++++|...+.. .|.+||..++++++++.... . ...++++ .+..++|+++.. +.|
T Consensus 145 ~~p~~~~~vs~~~d~--------~V~v~D~~t~~~~~~i~~g~-----~---~~~v~~s-----pdg~~l~v~~~d-~~V 202 (543)
T 1nir_A 145 LDLPNLFSVTLRDAG--------QIALVDGDSKKIVKVIDTGY-----A---VHISRMS-----ASGRYLLVIGRD-ARI 202 (543)
T ss_dssp CCGGGEEEEEEGGGT--------EEEEEETTTCCEEEEEECST-----T---EEEEEEC-----TTSCEEEEEETT-SEE
T ss_pred cCCCCEEEEEEcCCC--------eEEEEECCCceEEEEEecCc-----c---cceEEEC-----CCCCEEEEECCC-CeE
Confidence 456778888876655 78899999999999887554 1 2234443 378899999987 999
Q ss_pred EEEEc--cCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeE
Q psy731 214 VVYNY--RTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHI 291 (494)
Q Consensus 214 IVyd~--~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gl 291 (494)
.+||+ .+++.-+- +..+.....++++..+ +-++.++|++....+.+
T Consensus 203 ~v~D~~~~t~~~~~~-------------------------------i~~g~~p~~va~sp~~-~~dg~~l~v~~~~~~~v 250 (543)
T 1nir_A 203 DMIDLWAKEPTKVAE-------------------------------IKIGIEARSVESSKFK-GYEDRYTIAGAYWPPQF 250 (543)
T ss_dssp EEEETTSSSCEEEEE-------------------------------EECCSEEEEEEECCST-TCTTTEEEEEEEESSEE
T ss_pred EEEECcCCCCcEEEE-------------------------------EecCCCcceEEeCCCc-CCCCCEEEEEEccCCeE
Confidence 99999 66543211 1112234555654200 01367999999888999
Q ss_pred EEEEcCCCcEEEEec-CCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCc
Q psy731 292 VVYNYRTNDSHIIHH-NYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSL 370 (494)
Q Consensus 292 iVydl~~~~swrv~~-~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~ 370 (494)
.|||.++.+.-+... ..+. ++++.|.....+.+|+.||++ +.+|+.-....++.-+.++..+..
T Consensus 251 ~v~D~~t~~~~~~i~~~g~~---------~~~~~~~~~~~v~~i~~s~~~----~~~~vs~~~~g~i~vvd~~~~~~l-- 315 (543)
T 1nir_A 251 AIMDGETLEPKQIVSTRGMT---------VDTQTYHPEPRVAAIIASHEH----PEFIVNVKETGKVLLVNYKDIDNL-- 315 (543)
T ss_dssp EEEETTTCCEEEEEECCEEC---------SSSCCEESCCCEEEEEECSSS----SEEEEEETTTTEEEEEECTTSSSC--
T ss_pred EEEeccccccceeecccCcc---------cCccccccCCceEEEEECCCC----CEEEEEECCCCeEEEEEecCCCcc--
Confidence 999999887655432 1111 111112211236779999873 577776655557777766543211
Q ss_pred CccccccceEEecccCCCCCCCeEEeeCCCCe-EEEeccCCCeEEEEeCCCC
Q psy731 371 DFSRSNFDFKVMGSRGTGSQSGASSLDEETGV-IFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 371 ~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~-ly~~~~~~~aI~~w~~~~~ 421 (494)
.+..+. .| ....++++| .+|. +|.+.-..+.|..||+.+|
T Consensus 316 -------~~~~i~-~~--~~~~~~~~s-pdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 316 -------TVTSIG-AA--PFLHDGGWD-SSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp -------EEEEEE-CC--SSCCCEEEC-TTSCEEEEEEGGGTEEEEEETTTT
T ss_pred -------eeEEec-cC--cCccCceEC-CCCCEEEEEecCCCeEEEEECCCC
Confidence 111222 12 234577999 5675 6777778899999999875
No 83
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.17 E-value=0.00015 Score=71.84 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=85.6
Q ss_pred cEEEEecCCCCeEEEEEcCCCcEEE-EecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcce
Q psy731 279 AFLYIADSGHNHIVVYNYRTNDSHI-IHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTE 357 (494)
Q Consensus 279 ~~~YI~D~~~~gliVydl~~~~swr-v~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~l 357 (494)
..+|+++...+.+.|||.++.+--+ |... . -.|+.|+++ +++||.+- .+.++
T Consensus 76 ~~lyv~t~~~~~v~viD~~t~~v~~~i~~g--~--------------------~~g~glt~D----g~~l~vs~-gs~~l 128 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ--M--------------------KDGWGLATD----GKILYGSD-GTSIL 128 (266)
T ss_dssp TEEEEEETTCSEEEEEETTTTEEEEEEECC--S--------------------SSCCEEEEC----SSSEEEEC-SSSEE
T ss_pred CEEEEEEecCCEEEEEECCCCcEEEEEECC--C--------------------CCeEEEEEC----CCEEEEEC-CCCeE
Confidence 4678887777778888877654211 1111 0 124667776 36899876 45688
Q ss_pred EeeechhhcCCCcCccccccceEEecccCC-CCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeec-
Q psy731 358 FAVTTKVLQNRSLDFSRSNFDFKVMGSRGT-GSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAED- 435 (494)
Q Consensus 358 y~V~T~~L~~~~~~~~~~~~~v~~~G~~G~-~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d- 435 (494)
+.+.++-++- ...++ +|.+|. -...-++.+. +|.||.+....+.|.+.|+.+|+.. +.+-..
T Consensus 129 ~viD~~t~~v--------~~~I~-Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~-----~~I~~~g 192 (266)
T 2iwa_A 129 YEIDPHTFKL--------IKKHN-VKYNGHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLL-----GWILLPN 192 (266)
T ss_dssp EEECTTTCCE--------EEEEE-CEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEE-----EEEECHH
T ss_pred EEEECCCCcE--------EEEEE-ECCCCcccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEE-----EEEECCC
Confidence 8887754421 11222 444321 1123466666 5899999989999999999886321 222110
Q ss_pred ---------CCeEecccceEEcCCc-eEEEEecCchh
Q psy731 436 ---------NATLIYPSDIRVDRTG-VLWVLSNKLPV 462 (494)
Q Consensus 436 ---------~~~l~~pd~~~id~~g-~Lwvlsnrl~~ 462 (494)
.+...-|.|++++++| .|||+.-+-++
T Consensus 193 ~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~ 229 (266)
T 2iwa_A 193 LRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK 229 (266)
T ss_dssp HHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred cccccccccccccCceEEEEEcCCCCEEEEECCCCCe
Confidence 1122467899999876 68887655544
No 84
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.16 E-value=0.00081 Score=64.08 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=44.9
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeE
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHI 225 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~r 225 (494)
.|..||+.++++++++.++. .......++++- ++.++|+++...+.|.+||+.+++..+
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~s~-----dg~~l~v~~~~~~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIAD-----AGPTPMVPMVAP-----GGRIAYATVNKSESLVKIDLVTGETLG 70 (337)
T ss_dssp EEEEEETTTTEEEEEEECTT-----CTTCCCCEEECT-----TSSEEEEEETTTTEEEEEETTTCCEEE
T ss_pred eEEEEECCCCcEEEEEEcCC-----CCCCccceEEcC-----CCCEEEEEeCCCCeEEEEECCCCCeEe
Confidence 78889999999998887665 111245666642 566999999999999999999987644
No 85
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.12 E-value=0.00075 Score=64.87 Aligned_cols=208 Identities=11% Similarity=0.160 Sum_probs=125.3
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEE
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVY 216 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVy 216 (494)
.++||+-..+. .|.++|.. ++...++..+. .....+.+| .++.+|+... .++|..|
T Consensus 107 ~~~l~v~t~~~---------~l~~~d~~-g~~~~~~~~~~-------~~~~~~~~~------~~g~l~vgt~-~~~l~~~ 162 (330)
T 3hxj_A 107 EDILYVTSMDG---------HLYAINTD-GTEKWRFKTKK-------AIYATPIVS------EDGTIYVGSN-DNYLYAI 162 (330)
T ss_dssp TTEEEEECTTS---------EEEEECTT-SCEEEEEECSS-------CCCSCCEEC------TTSCEEEECT-TSEEEEE
T ss_pred CCEEEEEecCC---------EEEEEcCC-CCEEEEEcCCC-------ceeeeeEEc------CCCEEEEEcC-CCEEEEE
Confidence 78899854322 69999998 88777776544 234556664 4667888753 4789999
Q ss_pred EccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEc
Q psy731 217 NYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNY 296 (494)
Q Consensus 217 d~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl 296 (494)
|......|++... ......+.+|. ++.+|++. .+|..||.
T Consensus 163 d~~g~~~~~~~~~-------------------------------~~~~~~~~~d~------~g~l~v~t---~~l~~~d~ 202 (330)
T 3hxj_A 163 NPDGTEKWRFKTN-------------------------------DAITSAASIGK------DGTIYFGS---DKVYAINP 202 (330)
T ss_dssp CTTSCEEEEEECS-------------------------------SCCCSCCEECT------TCCEEEES---SSEEEECT
T ss_pred CCCCCEeEEEecC-------------------------------CCceeeeEEcC------CCEEEEEe---CEEEEECC
Confidence 9994445666310 11233445552 45688987 89999995
Q ss_pred CCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccc
Q psy731 297 RTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSN 376 (494)
Q Consensus 297 ~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~ 376 (494)
.....|+..... ..+.+++++++ ..||+....+ .++.+.. +..
T Consensus 203 ~g~~~~~~~~~~--------------------~~~~~~~~~~~-----g~l~v~t~~~-gl~~~~~----~g~------- 245 (330)
T 3hxj_A 203 DGTEKWNFYAGY--------------------WTVTRPAISED-----GTIYVTSLDG-HLYAINP----DGT------- 245 (330)
T ss_dssp TSCEEEEECCSS--------------------CCCSCCEECTT-----SCEEEEETTT-EEEEECT----TSC-------
T ss_pred CCcEEEEEccCC--------------------cceeceEECCC-----CeEEEEcCCC-eEEEECC----CCC-------
Confidence 556677765321 11444666543 3788876544 6666631 111
Q ss_pred cceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEE
Q psy731 377 FDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVL 456 (494)
Q Consensus 377 ~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvl 456 (494)
.+...... ......+.+| .+|+||++.- ...|.|+|+++ .. ....... . .....+.+|.+|.||+.
T Consensus 246 -~~~~~~~~--~~~~~~~~~~-~~g~l~v~t~-~ggl~~~d~~g--~~----~~~~~~~-~--~~~~~~~~d~~g~l~~g 311 (330)
T 3hxj_A 246 -EKWRFKTG--KRIESSPVIG-NTDTIYFGSY-DGHLYAINPDG--TE----KWNFETG-S--WIIATPVIDENGTIYFG 311 (330)
T ss_dssp -EEEEEECS--SCCCSCCEEC-TTSCEEEECT-TCEEEEECTTS--CE----EEEEECS-S--CCCSCCEECTTCCEEEE
T ss_pred -EeEEeeCC--CCccccceEc-CCCeEEEecC-CCCEEEECCCC--cE----EEEEEcC-C--ccccceEEcCCCEEEEE
Confidence 11111111 1223456788 8999999865 45899999865 21 1111111 1 23456788899999998
Q ss_pred ecC
Q psy731 457 SNK 459 (494)
Q Consensus 457 snr 459 (494)
+++
T Consensus 312 t~~ 314 (330)
T 3hxj_A 312 TRN 314 (330)
T ss_dssp CTT
T ss_pred cCC
Confidence 753
No 86
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.10 E-value=0.00035 Score=69.12 Aligned_cols=180 Identities=8% Similarity=0.001 Sum_probs=110.1
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDD 278 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~ 278 (494)
+++.+|++|...+.|.+||.+++....+.. ......++++. +
T Consensus 59 ~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~--------------------------------~~~v~~i~~~~------d 100 (326)
T 2ghs_A 59 ASGTAWWFNILERELHELHLASGRKTVHAL--------------------------------PFMGSALAKIS------D 100 (326)
T ss_dssp TTTEEEEEEGGGTEEEEEETTTTEEEEEEC--------------------------------SSCEEEEEEEE------T
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEEC--------------------------------CCcceEEEEeC------C
Confidence 457899999999999999999887654421 01234455553 2
Q ss_pred cEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC-----
Q psy731 279 AFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA----- 353 (494)
Q Consensus 279 ~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls----- 353 (494)
+-+|++. ..+|.+||.++++.-++..... .. . ...+..++++|+ | .+|+..+.
T Consensus 101 g~l~v~~--~~gl~~~d~~~g~~~~~~~~~~--~~----------~---~~~~~~i~~d~~---G--~l~v~~~~~~~~~ 158 (326)
T 2ghs_A 101 SKQLIAS--DDGLFLRDTATGVLTLHAELES--DL----------P---GNRSNDGRMHPS---G--ALWIGTMGRKAET 158 (326)
T ss_dssp TEEEEEE--TTEEEEEETTTCCEEEEECSST--TC----------T---TEEEEEEEECTT---S--CEEEEEEETTCCT
T ss_pred CeEEEEE--CCCEEEEECCCCcEEEEeeCCC--CC----------C---CCCCCCEEECCC---C--CEEEEeCCCcCCC
Confidence 3456665 4679999999887655432110 00 0 013567899876 3 48886653
Q ss_pred -CcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCC-eEEEeccCCCeEEEEeCC--CCccccccce
Q psy731 354 -STTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETG-VIFYALLVKSGVGCWNTF--RGEEYNEKSM 429 (494)
Q Consensus 354 -s~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G-~ly~~~~~~~aI~~w~~~--~~~~~~~~~~ 429 (494)
...+|++.+ .. ++.+-.. .....+++++ .+| .||+++...+.|.+|+.+ +|..+ .+.
T Consensus 159 ~~~~l~~~~~-----g~---------~~~~~~~--~~~~~~i~~s-~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~--~~~ 219 (326)
T 2ghs_A 159 GAGSIYHVAK-----GK---------VTKLFAD--ISIPNSICFS-PDGTTGYFVDTKVNRLMRVPLDARTGLPT--GKA 219 (326)
T ss_dssp TCEEEEEEET-----TE---------EEEEEEE--ESSEEEEEEC-TTSCEEEEEETTTCEEEEEEBCTTTCCBS--SCC
T ss_pred CceEEEEEeC-----Cc---------EEEeeCC--CcccCCeEEc-CCCCEEEEEECCCCEEEEEEcccccCCcc--cCc
Confidence 246777751 11 1111111 1234588999 556 799999888999999975 43011 112
Q ss_pred eeeeecCCeEecccceEEcCCceEEEEe
Q psy731 430 GLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 430 ~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
.++..-......|+++.+|.+|.|||.+
T Consensus 220 ~~~~~~~~~~~~p~gi~~d~~G~lwva~ 247 (326)
T 2ghs_A 220 EVFIDSTGIKGGMDGSVCDAEGHIWNAR 247 (326)
T ss_dssp EEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred eEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 2332211122468999999999999997
No 87
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.09 E-value=0.00097 Score=64.99 Aligned_cols=223 Identities=9% Similarity=0.019 Sum_probs=133.2
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEE
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVY 216 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVy 216 (494)
.+++.+.+.+.. .|.++|.+|++++.++..+. ....+++.++ .++.+|++ ..+.+.+|
T Consensus 4 ~~~~lv~~~~~~--------~v~~~d~~tG~~~w~~~~~~------~~~~~~~~~~------pdG~ilvs--~~~~V~~~ 61 (276)
T 3no2_A 4 PQHLLVGGSGWN--------KIAIINKDTKEIVWEYPLEK------GWECNSVAAT------KAGEILFS--YSKGAKMI 61 (276)
T ss_dssp CCEEEEECTTCS--------EEEEEETTTTEEEEEEECCT------TCCCCEEEEC------TTSCEEEE--CBSEEEEE
T ss_pred CCcEEEeeCCCC--------EEEEEECCCCeEEEEeCCCc------cCCCcCeEEC------CCCCEEEe--CCCCEEEE
Confidence 357778877776 89999999999999887653 0234555553 24557774 46789999
Q ss_pred EccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC-CCeEEEEE
Q psy731 217 NYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG-HNHIVVYN 295 (494)
Q Consensus 217 d~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~-~~gliVyd 295 (494)
|.+....|++... ....+.+..+. .++-.++++.. ...++.+|
T Consensus 62 d~~G~~~W~~~~~------------------------------~~~~~~~~~~~------~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 62 TRDGRELWNIAAP------------------------------AGCEMQTARIL------PDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp CTTSCEEEEEECC------------------------------TTCEEEEEEEC------TTSCEEEEEESTTEEEEEEC
T ss_pred CCCCCEEEEEcCC------------------------------CCccccccEEC------CCCCEEEEecCCCCEEEEEe
Confidence 9966678888320 00011122221 23456777776 66788888
Q ss_pred cCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCcccc
Q psy731 296 YRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRS 375 (494)
Q Consensus 296 l~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~ 375 (494)
......|++.-..-...+ + ....+++.+++ | .+++.-....+++.+..+ .
T Consensus 106 ~~Gk~l~~~~~~~~~~~~-----------~---~~~~~v~~~~~---G--~~lv~~~~~~~v~~~d~~----G------- 155 (276)
T 3no2_A 106 MKGEVLSKTEFETGIERP-----------H---AQFRQINKNKK---G--NYLVPLFATSEVREIAPN----G------- 155 (276)
T ss_dssp TTSCEEEEEEECCSCSSG-----------G---GSCSCCEECTT---S--CEEEEETTTTEEEEECTT----S-------
T ss_pred CCCCEEEEEeccCCCCcc-----------c---ccccCceECCC---C--CEEEEecCCCEEEEECCC----C-------
Confidence 877778887532111000 0 01223555553 2 333333333344444321 1
Q ss_pred ccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeec---CCeEecccceEEcCCce
Q psy731 376 NFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAED---NATLIYPSDIRVDRTGV 452 (494)
Q Consensus 376 ~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d---~~~l~~pd~~~id~~g~ 452 (494)
+.+-.++.. ...-+...+ .+|+++++....+.|.++|+++|+. +-.+... ..+|.||.++.+..+|.
T Consensus 156 -~~~w~~~~~---~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~-----~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 156 -QLLNSVKLS---GTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRI-----VRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp -CEEEEEECS---SCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCE-----EEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred -CEEEEEECC---CCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcE-----EEEecCCCCCCccccccccceEcCCCC
Confidence 111112211 123456777 7899999999888999999996532 1223221 23688999999999999
Q ss_pred EEEEe
Q psy731 453 LWVLS 457 (494)
Q Consensus 453 Lwvls 457 (494)
+||.+
T Consensus 226 i~v~~ 230 (276)
T 3no2_A 226 LYICN 230 (276)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99998
No 88
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.06 E-value=0.00078 Score=73.11 Aligned_cols=241 Identities=10% Similarity=0.072 Sum_probs=140.7
Q ss_pred EcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeE
Q psy731 134 SDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHI 213 (494)
Q Consensus 134 iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~i 213 (494)
.|..++++|...+.. .|.++|+.|++++.++.... ....+++. -+..++|++. ..+.|
T Consensus 163 ~d~~~~~~V~~~~~~--------~V~viD~~t~~v~~~i~~g~--------~p~~v~~S-----pDGr~lyv~~-~dg~V 220 (567)
T 1qks_A 163 WDLENLFSVTLRDAG--------QIALIDGSTYEIKTVLDTGY--------AVHISRLS-----ASGRYLFVIG-RDGKV 220 (567)
T ss_dssp CCGGGEEEEEETTTT--------EEEEEETTTCCEEEEEECSS--------CEEEEEEC-----TTSCEEEEEE-TTSEE
T ss_pred cCCCceEEEEeCCCC--------eEEEEECCCCeEEEEEeCCC--------CccceEEC-----CCCCEEEEEc-CCCeE
Confidence 455678888887776 89999999999999887665 12245553 2678999997 45689
Q ss_pred EEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEE
Q psy731 214 VVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVV 293 (494)
Q Consensus 214 IVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliV 293 (494)
.+||+.+++...+.. ++.+.....+++...++ .++.++|+++...+.+.|
T Consensus 221 ~viD~~~~t~~~v~~-----------------------------i~~G~~P~~ia~s~~~~-pDGk~l~v~n~~~~~v~V 270 (567)
T 1qks_A 221 NMIDLWMKEPTTVAE-----------------------------IKIGSEARSIETSKMEG-WEDKYAIAGAYWPPQYVI 270 (567)
T ss_dssp EEEETTSSSCCEEEE-----------------------------EECCSEEEEEEECCSTT-CTTTEEEEEEEETTEEEE
T ss_pred EEEECCCCCCcEeEE-----------------------------EecCCCCceeEEccccC-CCCCEEEEEEccCCeEEE
Confidence 999996222222210 11223345566652000 146899999999999999
Q ss_pred EEcCCCcEEEEec-CCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCc
Q psy731 294 YNYRTNDSHIIHH-NYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDF 372 (494)
Q Consensus 294 ydl~~~~swrv~~-~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~ 372 (494)
+|..+.+--+.-. ..+. ++++.+...-.+-+|..|+++ ..+|+.-.-+.++.-|..+..++.
T Consensus 271 iD~~t~~~~~~i~~~~~~---------~~~~~~~p~~rva~i~~s~~~----~~~vv~~~~~g~v~~vd~~~~~~~---- 333 (567)
T 1qks_A 271 MDGETLEPKKIQSTRGMT---------YDEQEYHPEPRVAAILASHYR----PEFIVNVKETGKILLVDYTDLNNL---- 333 (567)
T ss_dssp EETTTCCEEEEEECCEEC---------TTTCCEESCCCEEEEEECSSS----SEEEEEETTTTEEEEEETTCSSEE----
T ss_pred EECCCCcEEEEEeccccc---------cccccccCCCceEEEEEcCCC----CEEEEEecCCCeEEEEecCCCccc----
Confidence 9988876543321 1111 111111111135568888762 456665555557777766543211
Q ss_pred cccccceEEecccCCCCCCCeEEeeCCCC-eEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecc-cceE-EcC
Q psy731 373 SRSNFDFKVMGSRGTGSQSGASSLDEETG-VIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYP-SDIR-VDR 449 (494)
Q Consensus 373 ~~~~~~v~~~G~~G~~~qs~g~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~p-d~~~-id~ 449 (494)
.+..++ .| ....++.+| .+| .+|.+.-..|.|..+|+.++ .. ...+-.. ...-.| .|.. +++
T Consensus 334 -----~v~~i~-~~--~~~~d~~~~-pdgr~~~va~~~sn~V~ViD~~t~-kl----~~~i~vg-g~~Phpg~g~~~~~p 398 (567)
T 1qks_A 334 -----KTTEIS-AE--RFLHDGGLD-GSHRYFITAANARNKLVVIDTKEG-KL----VAIEDTG-GQTPHPGRGANFVHP 398 (567)
T ss_dssp -----EEEEEE-CC--SSEEEEEEC-TTSCEEEEEEGGGTEEEEEETTTT-EE----EEEEECS-SSSBCCTTCEEEEET
T ss_pred -----eeeeee-cc--ccccCceEC-CCCCEEEEEeCCCCeEEEEECCCC-cE----EEEEecc-CcCCCCccceeeECC
Confidence 122222 11 123466899 566 56777888999999999874 21 1222110 122334 3443 455
Q ss_pred C-ceEEEEec
Q psy731 450 T-GVLWVLSN 458 (494)
Q Consensus 450 ~-g~Lwvlsn 458 (494)
+ |.+|++++
T Consensus 399 ~~g~v~~t~~ 408 (567)
T 1qks_A 399 TFGPVWATSH 408 (567)
T ss_dssp TTEEEEEEEB
T ss_pred CCCcEEEeCC
Confidence 4 68888763
No 89
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.02 E-value=7.5e-05 Score=72.01 Aligned_cols=112 Identities=10% Similarity=0.132 Sum_probs=70.5
Q ss_pred eeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC
Q psy731 130 VKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG 209 (494)
Q Consensus 130 ~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~ 209 (494)
..+.+|..++||+...+. .|.+|| ++++++.++.++. .....+.+| .++.+|++...
T Consensus 23 ~~~~~d~~g~l~v~t~~~---------~l~~~d-~~g~~~~~~~~~~-------~~~~~~~~~------~~g~l~v~t~~ 79 (330)
T 3hxj_A 23 SSPILAKNGTIYLGSSNK---------NLYAIN-TDGSVKWFFKSGE-------IIECRPSIG------KDGTIYFGSDK 79 (330)
T ss_dssp CCCEECTTSCEECSSTTT---------TTEEEC-TTSCEEESSCGGG-------EEEECCEET------TTTEECCSSCE
T ss_pred cCceEccCCeEEEEcCCC---------EEEEEC-CCCcEEEEEecCC-------CcccceEEe------cCCcEEEecCc
Confidence 456788999999865332 488999 8898876554332 233455554 47789997654
Q ss_pred CCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCC
Q psy731 210 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHN 289 (494)
Q Consensus 210 ~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~ 289 (494)
|+.||.+....|++... .......+++ ++.+|+.. ...
T Consensus 80 ---l~~~d~~g~~~~~~~~~-------------------------------~~~~~~~~~~-------~~~l~v~t-~~~ 117 (330)
T 3hxj_A 80 ---VYAINPDGTEKWRFDTK-------------------------------KAIVSDFTIF-------EDILYVTS-MDG 117 (330)
T ss_dssp ---EEEECCCGGGGGGSCC------------------------------------CCEEEE-------TTEEEEEC-TTS
T ss_pred ---EEEECCCCcEEEEEECC-------------------------------CCcccCceEE-------CCEEEEEe-cCC
Confidence 99998755555655210 0011223333 45678864 356
Q ss_pred eEEEEEcCCCcEEEEec
Q psy731 290 HIVVYNYRTNDSHIIHH 306 (494)
Q Consensus 290 gliVydl~~~~swrv~~ 306 (494)
+|..||.+....|+...
T Consensus 118 ~l~~~d~~g~~~~~~~~ 134 (330)
T 3hxj_A 118 HLYAINTDGTEKWRFKT 134 (330)
T ss_dssp EEEEECTTSCEEEEEEC
T ss_pred EEEEEcCCCCEEEEEcC
Confidence 89999998667787763
No 90
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.01 E-value=0.0024 Score=62.39 Aligned_cols=205 Identities=14% Similarity=0.041 Sum_probs=131.8
Q ss_pred eeeeeeeeCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCcc---ccCCCcccccccCCCceEEeeEEEcCCCeE
Q psy731 64 LPVSLDKWHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPIL---MPYPSWESNVREARNLTSVVKVQSDPCDRL 140 (494)
Q Consensus 64 ~p~gv~v~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l---~PYP~~~~n~~~~~~lvsV~~i~iD~~~~L 140 (494)
.--|+.+.++++|++-.... .++|..+..+.+ ++ .+.|.- .--.++.++ .++|
T Consensus 22 ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tg----------kv~~~~~l~~~----------~fgeGi~~~-~~~l 77 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG---RSSVRKVDLETG----------RILQRAEVPPP----------YFGAGIVAW-RDRL 77 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT---SCEEEEEETTTC----------CEEEEEECCTT----------CCEEEEEEE-TTEE
T ss_pred ccccEEEECCEEEEECCCCC---CceEEEEECCCC----------CEEEEEeCCCC----------cceeEEEEe-CCEE
Confidence 34699998999999998753 357888887543 22 123321 112344554 5899
Q ss_pred EEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccC
Q psy731 141 WALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRT 220 (494)
Q Consensus 141 wvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~ 220 (494)
|+++-... ++.+||++|.++++++..+. .. ..+.. ++..+|+|| +.+.|.++|.++
T Consensus 78 y~ltw~~~--------~v~v~D~~tl~~~~ti~~~~-----~G-----wglt~-----dg~~L~vSd-gs~~l~~iDp~t 133 (243)
T 3mbr_X 78 IQLTWRNH--------EGFVYDLATLTPRARFRYPG-----EG-----WALTS-----DDSHLYMSD-GTAVIRKLDPDT 133 (243)
T ss_dssp EEEESSSS--------EEEEEETTTTEEEEEEECSS-----CC-----CEEEE-----CSSCEEEEC-SSSEEEEECTTT
T ss_pred EEEEeeCC--------EEEEEECCcCcEEEEEeCCC-----Cc-----eEEee-----CCCEEEEEC-CCCeEEEEeCCC
Confidence 99986665 89999999999999998765 11 22222 467899999 688999999988
Q ss_pred CceeEE---ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcC
Q psy731 221 NDSHII---HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYR 297 (494)
Q Consensus 221 ~~~~rv---~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~ 297 (494)
.+..+- ..+.+ +-..++.+. |.++.+|...-..+.|.|.|.+
T Consensus 134 ~~~~~~I~V~~~g~----------------------------~~~~lNeLe-------~~~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 134 LQQVGSIKVTAGGR----------------------------PLDNLNELE-------WVNGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp CCEEEEEECEETTE----------------------------ECCCEEEEE-------EETTEEEEEETTTTEEEEECTT
T ss_pred CeEEEEEEEccCCc----------------------------ccccceeeE-------EeCCEEEEEECCCCeEEEEECC
Confidence 765433 11000 111223222 3357799888778899999999
Q ss_pred CCcEEEEec-CCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeec
Q psy731 298 TNDSHIIHH-NYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTT 362 (494)
Q Consensus 298 ~~~swrv~~-~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T 362 (494)
+++--..-. ....++... . + ..-.+-.+|||++|. .+.||..-=.=.++|.|.-
T Consensus 179 tG~V~~~idl~~l~~~~~~--~---~--~~~~~vlNGIA~d~~----~~~lfVTGK~wp~~~~v~~ 233 (243)
T 3mbr_X 179 SGKVVAWIDLQALVPDADA--L---T--DSTNDVLNGIAFDAE----HDRLFVTGKRWPMLYEIRL 233 (243)
T ss_dssp TCBEEEEEECGGGSTTTTS--C---C--CTTSSCEEEEEEETT----TTEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEEECCcCcccccc--c---c--CCcCCceEEEEEcCC----CCEEEEECCCCCcEEEEEE
Confidence 998655543 223322100 0 0 001134799999986 3688886555558888864
No 91
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.00 E-value=0.0024 Score=64.69 Aligned_cols=84 Identities=6% Similarity=0.001 Sum_probs=54.3
Q ss_pred CceEEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEE-EcCCCccccccCCccceEEEeecCCCCCcE
Q psy731 125 NLTSVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFF-QLKEKTDYTEESKFSNMVVDVTSANCDNAF 202 (494)
Q Consensus 125 ~lvsV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~-~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~ 202 (494)
+|.....|..+++++ |||.+.+ . +|.+++. +++....+ .+|. +.......+.+++++-. --.+++
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~~-G--------~i~~~~~-~g~~~~~~~~~~~-v~~~g~~g~~gia~~pd--f~~~g~ 82 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLRG-G--------ELRHWQA-GKGLSAPLSGVPD-VWAHGQGGLLDVVLAPD--FAQSRR 82 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEETT-T--------EEEEEET-TTEECCCCBSCCC-CCCSTTCSEEEEEECTT--HHHHCE
T ss_pred CCCCcEEEEEcCCCCEEEEEeCC-c--------eEEEEeC-CCceeeEecCCcc-cccCCCCCceeEEECCC--CCCCCE
Confidence 577788999999999 9999974 2 6888885 34332111 1332 22334567788888520 001689
Q ss_pred EEEeeCC-------CCeEEEEEccCC
Q psy731 203 LYIADSG-------HNHIVVYNYRTN 221 (494)
Q Consensus 203 vYItDs~-------~~~iIVyd~~~~ 221 (494)
+|++++. ...|..|+++.+
T Consensus 83 lYv~~~~~~~~g~~~~~v~r~~~~~~ 108 (353)
T 2g8s_A 83 IWLSYSEVGDDGKAGTAVGYGRLSDD 108 (353)
T ss_dssp EEEEEEEECSSSCEEEEEEEEEECTT
T ss_pred EEEEEeCCCCCCCceeEEEEEEECCC
Confidence 9999875 346777777654
No 92
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.00 E-value=0.0014 Score=64.85 Aligned_cols=214 Identities=13% Similarity=0.059 Sum_probs=133.3
Q ss_pred CCeeeeeeeeC-CcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccc--cCCCcccccccCCCceEEeeEEEcCCC
Q psy731 62 NCLPVSLDKWH-DRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILM--PYPSWESNVREARNLTSVVKVQSDPCD 138 (494)
Q Consensus 62 ~~~p~gv~v~~-gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~--PYP~~~~n~~~~~~lvsV~~i~iD~~~ 138 (494)
..-|.|+++.. |++|++-..+. -.+|.+|....+ . .+. |.|. -....++..+ .+
T Consensus 20 ~~f~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg----~-----v~~~i~l~~----------~~fgeGi~~~-g~ 76 (266)
T 2iwa_A 20 YAFTQGLVYAENDTLFESTGLYG---RSSVRQVALQTG----K-----VENIHKMDD----------SYFGEGLTLL-NE 76 (266)
T ss_dssp TCCEEEEEECSTTEEEEEECSTT---TCEEEEEETTTC----C-----EEEEEECCT----------TCCEEEEEEE-TT
T ss_pred CCCcccEEEeCCCeEEEECCCCC---CCEEEEEECCCC----C-----EEEEEecCC----------CcceEEEEEe-CC
Confidence 34678999964 99999986542 257888886543 1 121 1221 1122356665 46
Q ss_pred eEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcC-CCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEE
Q psy731 139 RLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLK-EKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYN 217 (494)
Q Consensus 139 ~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp-~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd 217 (494)
+||+++-... .+.+||+.|.++++++..+ . .. ..+.. +...+|+|| +.+.|.|+|
T Consensus 77 ~lyv~t~~~~--------~v~viD~~t~~v~~~i~~g~~-----~g-----~glt~-----Dg~~l~vs~-gs~~l~viD 132 (266)
T 2iwa_A 77 KLYQVVWLKN--------IGFIYDRRTLSNIKNFTHQMK-----DG-----WGLAT-----DGKILYGSD-GTSILYEID 132 (266)
T ss_dssp EEEEEETTCS--------EEEEEETTTTEEEEEEECCSS-----SC-----CEEEE-----CSSSEEEEC-SSSEEEEEC
T ss_pred EEEEEEecCC--------EEEEEECCCCcEEEEEECCCC-----Ce-----EEEEE-----CCCEEEEEC-CCCeEEEEE
Confidence 9999998776 8999999999999998876 3 11 11221 467899999 788999999
Q ss_pred ccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcC
Q psy731 218 YRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYR 297 (494)
Q Consensus 218 ~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~ 297 (494)
.++.+.-+-= .+.+ --.+...++.+... ++.+|++....+.|.|.|.+
T Consensus 133 ~~t~~v~~~I-----------------------~Vg~--~~~p~~~~nele~~-------dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 133 PHTFKLIKKH-----------------------NVKY--NGHRVIRLNELEYI-------NGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp TTTCCEEEEE-----------------------ECEE--TTEECCCEEEEEEE-------TTEEEEEETTSSEEEEEETT
T ss_pred CCCCcEEEEE-----------------------EECC--CCcccccceeEEEE-------CCEEEEecCCCCeEEEEECC
Confidence 9886643320 0000 00011123434332 35799998888999999999
Q ss_pred CCcEEEEec-CCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhh
Q psy731 298 TNDSHIIHH-NYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVL 365 (494)
Q Consensus 298 ~~~swrv~~-~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L 365 (494)
+++.-+.-. ....++... .+ ..-.+..+|||++|+ ++.||..--...++|.|...-.
T Consensus 181 tg~V~~~I~~~g~~~~~~~-----~~--~~~~~v~nGIa~~~~----~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 181 DGTLLGWILLPNLRKKLID-----EG--FRDIDVLNGIAWDQE----NKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TCCEEEEEECHHHHHHHHH-----TT--CTTCCCEEEEEEETT----TTEEEEEETTCSEEEEEEEEEC
T ss_pred CCcEEEEEECCCccccccc-----cc--ccccCceEEEEEcCC----CCEEEEECCCCCeEEEEEEecc
Confidence 987533322 111110000 00 000134689999987 3689997766779999987655
No 93
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.99 E-value=0.0027 Score=68.02 Aligned_cols=231 Identities=11% Similarity=0.156 Sum_probs=131.9
Q ss_pred CCEEEEEECCCCcEEEEEEcCCCcc----ccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCc
Q psy731 155 PPSVQVYDLRQQMQIRFFQLKEKTD----YTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNY 230 (494)
Q Consensus 155 ~Pklv~~dl~t~~vi~~~~lp~~~~----~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~ 230 (494)
++.+.+||..|.++++++..+.... ..+.+....+++. ..+.++|++....+.|.++|+.+++.-++..
T Consensus 247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s-----~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~-- 319 (543)
T 1nir_A 247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS-----HEHPEFIVNVKETGKVLLVNYKDIDNLTVTS-- 319 (543)
T ss_dssp SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEEC-----SSSSEEEEEETTTTEEEEEECTTSSSCEEEE--
T ss_pred CCeEEEEeccccccceeecccCcccCccccccCCceEEEEEC-----CCCCEEEEEECCCCeEEEEEecCCCcceeEE--
Confidence 3478899999999999888643100 0123344445543 2467899999999999999998876433210
Q ss_pred cccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcc
Q psy731 231 LHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLH 310 (494)
Q Consensus 231 ~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~ 310 (494)
......+.++.++. ++.|+|++....+.|.|+|.++++--....-.-.
T Consensus 320 ---------------------------i~~~~~~~~~~~sp-----dg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ 367 (543)
T 1nir_A 320 ---------------------------IGAAPFLHDGGWDS-----SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT 367 (543)
T ss_dssp ---------------------------EECCSSCCCEEECT-----TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred ---------------------------eccCcCccCceECC-----CCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC
Confidence 11123355666663 4678999988889999999999875443322222
Q ss_pred cCCCCcceEEcCEEeeeecceeeee-eccCCCCCceeEEEee-CCCc--ceEeeechhhcCCCcCccccccceEEecccC
Q psy731 311 FDPLFGDFTIGGVNFQWQTGIHGMS-LSPLTRDNFRVMYFHP-LAST--TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRG 386 (494)
Q Consensus 311 ~dP~~~~~~v~G~~f~~~~Gi~gIa-Lsp~~~~g~r~LYf~p-lss~--~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G 386 (494)
|.|.. | ++ .+|+ ++.+|..+ +... .++.+.+. ..+ +...+-++.+--.|
T Consensus 368 ph~g~--------------g---~~~~~p~----~g~~~~s~~~~d~~V~v~d~~~~--~~~----~~~~~~v~~l~~~g 420 (543)
T 1nir_A 368 PHPGR--------------G---ANFVHPK----YGPVWSTSHLGDGSISLIGTDPK--NHP----QYAWKKVAELQGQG 420 (543)
T ss_dssp BCCTT--------------C---EEEEETT----TEEEEEEEBSSSSEEEEEECCTT--TCT----TTBTSEEEEEECSC
T ss_pred CCCCC--------------C---cccCCCC----CccEEEeccCCCceEEEEEeCCC--CCc----hhcCeEEEEEEcCC
Confidence 22211 1 22 2444 25677765 3333 34444331 000 01112233332111
Q ss_pred CCCCCCeEEeeCCCCeEEEec-cC-----CCeEEEEeCCCCccccccceeee--eec---CCeEecccceEEcCCc-eEE
Q psy731 387 TGSQSGASSLDEETGVIFYAL-LV-----KSGVGCWNTFRGEEYNEKSMGLV--AED---NATLIYPSDIRVDRTG-VLW 454 (494)
Q Consensus 387 ~~~qs~g~~~D~~~G~ly~~~-~~-----~~aI~~w~~~~~~~~~~~~~~~v--~~d---~~~l~~pd~~~id~~g-~Lw 454 (494)
..+-.+++.|+...||.+. ++ .+.|..||.++++. -.+++ .+- .+.-.++-.+.+.++| +||
T Consensus 421 --~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 421 --GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA----KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp --SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTS----CCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred --CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCC----CeEEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence 2345688886555777764 23 45999999987421 11222 100 0112467788898888 789
Q ss_pred EEe
Q psy731 455 VLS 457 (494)
Q Consensus 455 vls 457 (494)
+..
T Consensus 495 ~s~ 497 (543)
T 1nir_A 495 FSV 497 (543)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 94
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.95 E-value=0.0016 Score=63.67 Aligned_cols=211 Identities=13% Similarity=0.089 Sum_probs=129.2
Q ss_pred cEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC--CCCeEEEEEccCCceeEEecCccccCCCCCccccCC
Q psy731 167 MQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS--GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGG 244 (494)
Q Consensus 167 ~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs--~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g 244 (494)
+++++|+.+. .+|-+.+.+| ++.+|++-- +...|-++|+++|+.-+-..
T Consensus 10 ~v~~~~phd~------~~ftqGL~~~-------~~~LyestG~~g~S~v~~vD~~tgkv~~~~~---------------- 60 (243)
T 3mbr_X 10 RVVKRYPHDT------TAFTEGLFYL-------RGHLYESTGETGRSSVRKVDLETGRILQRAE---------------- 60 (243)
T ss_dssp EEEEEEECCT------TCCEEEEEEE-------TTEEEEEECCTTSCEEEEEETTTCCEEEEEE----------------
T ss_pred EEEEEcCCCC------ccccccEEEE-------CCEEEEECCCCCCceEEEEECCCCCEEEEEe----------------
Confidence 4688886654 6788999986 378999954 45689999999998866511
Q ss_pred ccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEE
Q psy731 245 EYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVN 324 (494)
Q Consensus 245 ~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~ 324 (494)
+.+..+-..++++ +..+|+.+-..+-+.|||.++.+--+ .|..
T Consensus 61 -------------l~~~~fgeGi~~~-------~~~ly~ltw~~~~v~v~D~~tl~~~~-------------ti~~---- 103 (243)
T 3mbr_X 61 -------------VPPPYFGAGIVAW-------RDRLIQLTWRNHEGFVYDLATLTPRA-------------RFRY---- 103 (243)
T ss_dssp -------------CCTTCCEEEEEEE-------TTEEEEEESSSSEEEEEETTTTEEEE-------------EEEC----
T ss_pred -------------CCCCcceeEEEEe-------CCEEEEEEeeCCEEEEEECCcCcEEE-------------EEeC----
Confidence 1111111345554 35689998778889999988765321 1111
Q ss_pred eeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCC-CCCCCeEEeeCCCCeE
Q psy731 325 FQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGT-GSQSGASSLDEETGVI 403 (494)
Q Consensus 325 f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~-~~qs~g~~~D~~~G~l 403 (494)
+--|.+|+++ ++.||.+-- |.+++-+.++-++- ...++ +++.|. -...-.+... +|.|
T Consensus 104 -----~~~Gwglt~d----g~~L~vSdg-s~~l~~iDp~t~~~--------~~~I~-V~~~g~~~~~lNeLe~~--~G~l 162 (243)
T 3mbr_X 104 -----PGEGWALTSD----DSHLYMSDG-TAVIRKLDPDTLQQ--------VGSIK-VTAGGRPLDNLNELEWV--NGEL 162 (243)
T ss_dssp -----SSCCCEEEEC----SSCEEEECS-SSEEEEECTTTCCE--------EEEEE-CEETTEECCCEEEEEEE--TTEE
T ss_pred -----CCCceEEeeC----CCEEEEECC-CCeEEEEeCCCCeE--------EEEEE-EccCCcccccceeeEEe--CCEE
Confidence 1134666665 368998765 55788887665421 12222 232221 1122234443 7899
Q ss_pred EEeccCCCeEEEEeCCCCccccccceeeeeec-----CCeEecccceEEcCC-ceEEEEecCchhhh
Q psy731 404 FYALLVKSGVGCWNTFRGEEYNEKSMGLVAED-----NATLIYPSDIRVDRT-GVLWVLSNKLPVFL 464 (494)
Q Consensus 404 y~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d-----~~~l~~pd~~~id~~-g~Lwvlsnrl~~~~ 464 (494)
|......+.|.+.|+.+|.....-.+.-+..+ .+...=|+||+.|++ +.|||+--+.|+..
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~ 229 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLY 229 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEE
Confidence 98888999999999998742211111101100 112235789999975 47898887777654
No 95
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.93 E-value=0.0013 Score=67.45 Aligned_cols=85 Identities=15% Similarity=0.287 Sum_probs=58.2
Q ss_pred CCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC-CccccccceeeeeecCCeEecccceEEcC-CceEEEEe--cCchhhh
Q psy731 389 SQSGASSLDEETGVIFYALLVKSGVGCWNTFR-GEEYNEKSMGLVAEDNATLIYPSDIRVDR-TGVLWVLS--NKLPVFL 464 (494)
Q Consensus 389 ~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~-~~~~~~~~~~~v~~d~~~l~~pd~~~id~-~g~Lwvls--nrl~~~~ 464 (494)
..+-|++++|....||+++...+.|.+++-+. | .+ .+.+++ .- + .+||++++|. +|.|||.+ +..+.+.
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g-~l--~~~~~~-~~-~--g~PDGi~vD~e~G~lwva~~~~g~~v~~ 293 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANW-TL--TPLRVL-SF-D--TLVDNISVDPVTGDLWVGCHPNGMRIFF 293 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-CE--EEEEEE-EC-S--SEEEEEEECTTTCCEEEEEESCHHHHHS
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCC-cE--ecCEEE-eC-C--CCCceEEEeCCCCcEEEEecCCceEEEE
Confidence 45789999954559999999999999999653 1 22 233343 21 2 5799999999 59999965 3344444
Q ss_pred cCCCCCCcccEEEEEEec
Q psy731 465 YSKLKPEDINVRIFKSTV 482 (494)
Q Consensus 465 ~~~~~~~~~nfrI~r~~~ 482 (494)
++-. ...+-.|+|++.
T Consensus 294 ~~P~--~~~~s~v~rI~~ 309 (355)
T 3sre_A 294 YDAE--NPPGSEVLRIQD 309 (355)
T ss_dssp CCTT--SCCCEEEEEEEC
T ss_pred ECCC--CCCCCEEEEEEc
Confidence 3221 245778888874
No 96
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.89 E-value=0.0022 Score=66.61 Aligned_cols=119 Identities=14% Similarity=0.049 Sum_probs=78.8
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC--------
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS-------- 208 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs-------- 208 (494)
..++||.|.+... ..-.|.++|+.|++++.++.... ... +++. .+..++|++++
T Consensus 44 ~~~vyV~~~~~~~----~~~~V~ViD~~t~~v~~~I~vG~--------~P~-va~s-----pDG~~lyVan~~~~r~~~G 105 (386)
T 3sjl_D 44 ARRVYVNDPAHFA----AVTQQFVIDGEAGRVIGMIDGGF--------LPN-PVVA-----DDGSFIAHASTVFSRIARG 105 (386)
T ss_dssp TTEEEEEECGGGC----SSEEEEEEETTTTEEEEEEEECS--------SCE-EEEC-----TTSSCEEEEEEEEEETTEE
T ss_pred CCEEEEEcCcccC----CCCEEEEEECCCCeEEEEEECCC--------CCc-EEEC-----CCCCEEEEEcccccccccC
Confidence 4589999997210 00189999999999999887654 113 6664 37889999985
Q ss_pred -CCCeEEEEEccCCceeE-EecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 209 -GHNHIVVYNYRTNDSHI-IHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 209 -~~~~iIVyd~~~~~~~r-v~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
..+.|-|||.++++.-+ |. +....-...+.....++++. ++.++|++..
T Consensus 106 ~~~~~VsviD~~t~~v~~~I~------------------------v~~g~r~~~g~~P~~~a~sp-----DGk~lyVan~ 156 (386)
T 3sjl_D 106 ERTDYVEVFDPVTLLPTADIE------------------------LPDAPRFLVGTYPWMTSLTP-----DGKTLLFYQF 156 (386)
T ss_dssp EEEEEEEEECTTTCCEEEEEE------------------------ETTCCCCCBSCCGGGEEECT-----TSSEEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEEE------------------------CCCccccccCCCCceEEEcC-----CCCEEEEEEc
Confidence 24579999999987533 21 00000000112344556653 4689999987
Q ss_pred C-CCeEEEEEcCCCcEE
Q psy731 287 G-HNHIVVYNYRTNDSH 302 (494)
Q Consensus 287 ~-~~gliVydl~~~~sw 302 (494)
. .+.+-|.|.++++--
T Consensus 157 ~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 157 SPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp SSSCEEEEEETTTTEEE
T ss_pred CCCCeEEEEECCCCcEE
Confidence 5 688999999998753
No 97
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.87 E-value=0.0049 Score=59.02 Aligned_cols=123 Identities=10% Similarity=0.055 Sum_probs=75.4
Q ss_pred eeeeee-eCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCe-EEE
Q psy731 65 PVSLDK-WHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDR-LWA 142 (494)
Q Consensus 65 p~gv~v-~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~-Lwv 142 (494)
.+|++. .++++|++-.. ..+|..+....+ ..+.-++. .....+..+.++++++ ||+
T Consensus 2 ~~g~~~~~~~~~~v~~~~-----~~~v~~~d~~~~---------~~~~~~~~--------~~~~~~~~~~~s~dg~~~~v 59 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNY-----PNNLHVVDVASD---------TVYKSCVM--------PDKFGPGTAMMAPDNRTAYV 59 (349)
T ss_dssp --CCCCCTTCEEEEEEET-----TTEEEEEETTTT---------EEEEEEEC--------SSCCSSCEEEECTTSSEEEE
T ss_pred CccccccCCCEEEEEeCC-----CCeEEEEECCCC---------cEEEEEec--------CCCCCCceeEECCCCCEEEE
Confidence 456766 46788887744 246777765322 11111111 0001245667777775 888
Q ss_pred EeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC-----------CC
Q psy731 143 LDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-----------HN 211 (494)
Q Consensus 143 lD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-----------~~ 211 (494)
...+.. .|.+||+.++++++++.++... .........++++ .++.++|+++.. .+
T Consensus 60 ~~~~~~--------~i~~~d~~t~~~~~~~~~~~~~-~~~~~~~~~~~~s-----pdg~~l~~~~~~~~~~~~~~~~~~~ 125 (349)
T 1jmx_B 60 LNNHYG--------DIYGIDLDTCKNTFHANLSSVP-GEVGRSMYSFAIS-----PDGKEVYATVNPTQRLNDHYVVKPP 125 (349)
T ss_dssp EETTTT--------EEEEEETTTTEEEEEEESCCST-TEEEECSSCEEEC-----TTSSEEEEEEEEEEECSSCEEECCC
T ss_pred EeCCCC--------cEEEEeCCCCcEEEEEEccccc-ccccccccceEEC-----CCCCEEEEEcccccccccccccCCC
Confidence 876554 7999999999999988875410 0002234566664 256789998854 57
Q ss_pred eEEEEEccCCce
Q psy731 212 HIVVYNYRTNDS 223 (494)
Q Consensus 212 ~iIVyd~~~~~~ 223 (494)
.|.+||+.+++.
T Consensus 126 ~i~~~d~~~~~~ 137 (349)
T 1jmx_B 126 RLEVFSTADGLE 137 (349)
T ss_dssp EEEEEEGGGGGG
T ss_pred eEEEEECCCccc
Confidence 899999988654
No 98
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.87 E-value=0.0041 Score=68.92 Aligned_cols=240 Identities=14% Similarity=0.148 Sum_probs=132.4
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCcc--ccccCCccceEEEeecCCCCCcE-EE
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTD--YTEESKFSNMVVDVTSANCDNAF-LY 204 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~--~~~~S~l~d~vVD~~~~~c~~~~-vY 204 (494)
.|..+..|..+.|||--.+. -|..||..+++..+ |..+.... .-....+..+..| .++. +|
T Consensus 358 ~V~~i~~d~~g~lWiGt~~~---------Gl~~~~~~~~~~~~-~~~~~~~~~~~l~~~~v~~i~~d------~~g~~lW 421 (795)
T 4a2l_A 358 VVSCIVEDKDKNLWIGTNDG---------GLNLYNPITQRFTS-YTLQEDESARGIGSNNIKAVYVD------EKKSLVY 421 (795)
T ss_dssp SEEEEEECTTSCEEEEESSS---------CEEEECTTTCCEEE-ECCC------CCSCSCEEEEEEE------TTTTEEE
T ss_pred eeEEEEECCCCCEEEEECCC---------CeEEEcCCCCcEEE-EecCCCCcccCCCCccEEEEEEc------CCCCEEE
Confidence 47888999999999943322 38889988887654 43221000 0012233444454 3556 88
Q ss_pred EeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 205 IADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 205 ItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
|.= ..++|.+||.++++.+++.+. +| . ........|..|. ++.++|+
T Consensus 422 igt-~~~Gl~~~d~~~~~~~~~~~~----~~--------------------~--l~~~~v~~i~~d~------~g~lwig 468 (795)
T 4a2l_A 422 IGT-HAGGLSILHRNSGQVENFNQR----NS--------------------Q--LVNENVYAILPDG------EGNLWLG 468 (795)
T ss_dssp EEE-TTTEEEEEETTTCCEEEECTT----TS--------------------C--CSCSCEEEEEECS------SSCEEEE
T ss_pred EEe-CcCceeEEeCCCCcEEEeecC----CC--------------------C--cCCCeeEEEEECC------CCCEEEE
Confidence 863 346899999999998887321 11 0 0111234455552 3557887
Q ss_pred cCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeee--c
Q psy731 285 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVT--T 362 (494)
Q Consensus 285 D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~--T 362 (494)
-. .||.+||.++++..++.+. .+|.. + . ..-+..|+.+++ ..|++....+ +|+.. +
T Consensus 469 t~--~Gl~~~~~~~~~~~~~~~~---~~~~~--~--~------~~~i~~i~~d~~-----g~lWigt~~G--l~~~~~~~ 526 (795)
T 4a2l_A 469 TL--SALVRFNPEQRSFTTIEKE---KDGTP--V--V------SKQITTLFRDSH-----KRLWIGGEEG--LSVFKQEG 526 (795)
T ss_dssp ES--SCEEEEETTTTEEEECCBC---TTCCB--C--C------CCCEEEEEECTT-----CCEEEEESSC--EEEEEEET
T ss_pred ec--CceeEEeCCCCeEEEcccc---ccccc--c--C------CceEEEEEECCC-----CCEEEEeCCc--eEEEeCCC
Confidence 53 7999999998765554432 11100 0 0 122555666543 3788876643 55443 2
Q ss_pred hhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeE--e
Q psy731 363 KVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATL--I 440 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l--~ 440 (494)
..+ .+.... ..-+- +.....++..| .+|+|+++... +|.+||++++ .+ ...... ..| .
T Consensus 527 ~~~---~~~~~~-----~~~~l--~~~~i~~i~~d-~~g~lWigT~~--Gl~~~d~~~~-~~-----~~~~~~-~gl~~~ 586 (795)
T 4a2l_A 527 LDI---QKASIL-----PVSNV--TKLFTNCIYEA-SNGIIWVGTRE--GFYCFNEKDK-QI-----KRYNTT-NGLPNN 586 (795)
T ss_dssp TEE---EECCCS-----CSCGG--GGSCEEEEEEC-TTSCEEEEESS--CEEEEETTTT-EE-----EEECGG-GTCSCS
T ss_pred CeE---EEecCC-----CCCCC--CCCeeEEEEEC-CCCCEEEEeCC--CceeECCCCC-cE-----EEeCCC-CCCchh
Confidence 221 000000 00000 01223467788 89999998764 9999999873 22 222111 111 0
Q ss_pred cccceEEcCCceEEEEec
Q psy731 441 YPSDIRVDRTGVLWVLSN 458 (494)
Q Consensus 441 ~pd~~~id~~g~Lwvlsn 458 (494)
...++..|.+|.||+.++
T Consensus 587 ~i~~i~~d~~g~lWi~t~ 604 (795)
T 4a2l_A 587 VVYGILEDSFGRLWLSTN 604 (795)
T ss_dssp CEEEEEECTTSCEEEEET
T ss_pred heEEEEECCCCCEEEEcC
Confidence 123567799999999985
No 99
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.87 E-value=0.0098 Score=63.18 Aligned_cols=79 Identities=13% Similarity=0.188 Sum_probs=49.7
Q ss_pred EEEEeCCCCCCCCCCCCEEEEEECCC-----CcEEEEEEcCCCccccccCCccceEEEee-cCC--CCCcEEEEeeCCCC
Q psy731 140 LWALDSGVVEGKMEQPPSVQVYDLRQ-----QMQIRFFQLKEKTDYTEESKFSNMVVDVT-SAN--CDNAFLYIADSGHN 211 (494)
Q Consensus 140 LwvlD~G~~~~~~~~~Pklv~~dl~t-----~~vi~~~~lp~~~~~~~~S~l~d~vVD~~-~~~--c~~~~vYItDs~~~ 211 (494)
+|.++.+.. ...+-.|..+|+.. +|++++.++|...--...+..|--.--+- ... -++.++|++--..+
T Consensus 30 ~~~~~~~~~---~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~ 106 (462)
T 2ece_A 30 VACLYTGTG---INRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSS 106 (462)
T ss_dssp EEEECTTTT---CCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTC
T ss_pred EEeeccCCC---CCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCC
Confidence 456666544 22455899999998 89999999988211111111110000000 012 35899999999999
Q ss_pred eEEEEEccCC
Q psy731 212 HIVVYNYRTN 221 (494)
Q Consensus 212 ~iIVyd~~~~ 221 (494)
.|.|+|.+++
T Consensus 107 ~I~viD~~t~ 116 (462)
T 2ece_A 107 RIYIIDTKPN 116 (462)
T ss_dssp CEEEEECCSC
T ss_pred eEEEEECCCC
Confidence 9999999876
No 100
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.85 E-value=0.0012 Score=66.43 Aligned_cols=119 Identities=13% Similarity=0.144 Sum_probs=76.8
Q ss_pred CeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC---------
Q psy731 138 DRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS--------- 208 (494)
Q Consensus 138 ~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs--------- 208 (494)
.++||.|.|... ...-.+.+||+.+++++.++.... .- .++++ .+..++|+++.
T Consensus 16 ~~~yv~~~~~~~---~~d~~v~v~D~~t~~~~~~i~~g~--------~p-~i~~s-----pdg~~lyv~~~~~~~~~~g~ 78 (361)
T 2oiz_A 16 NRIYVMDSVFMH---LTESRVHVYDYTNGKFLGMVPTAF--------NG-HVQVS-----NDGKKIYTMTTYHERITRGK 78 (361)
T ss_dssp GEEEEEECCGGG---GGGCEEEEEETTTCCEEEEEECCE--------EE-EEEEC-----TTSSEEEEEEEEETTSSSSC
T ss_pred CEEEEECCCCCc---cccCeEEEEECCCCeEEEEecCCC--------CC-ceEEC-----CCCCEEEEEEecccccccCC
Confidence 478899987642 112278999999999988765322 12 45553 36889999985
Q ss_pred CCCeEEEEEccCCceeE-EecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 209 GHNHIVVYNYRTNDSHI-IHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~r-v~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
..+.|.|||..+++..+ +.- .. .....+.....++++. +..++|++...
T Consensus 79 ~~~~v~v~d~~t~~~~~~i~~------------------------~~-~~~~~g~~p~~i~~sp-----dg~~l~v~n~~ 128 (361)
T 2oiz_A 79 RSDVVEVWDADKLTFEKEISL------------------------PP-KRVQGLNYDGLFRQTT-----DGKFIVLQNAS 128 (361)
T ss_dssp EEEEEEEEETTTCCEEEEEEE------------------------CT-TBCCBCCCGGGEEECT-----TSSEEEEEEES
T ss_pred CCCEEEEEECcCCcEEEEEEc------------------------Cc-cccccCCCcceEEECC-----CCCEEEEECCC
Confidence 23569999998766533 210 00 0001122345667763 46899999865
Q ss_pred -CCeEEEEEcCCCcEEE
Q psy731 288 -HNHIVVYNYRTNDSHI 303 (494)
Q Consensus 288 -~~gliVydl~~~~swr 303 (494)
.+.|.|||.++++.-+
T Consensus 129 ~~~~v~v~d~~~~~~~~ 145 (361)
T 2oiz_A 129 PATSIGIVDVAKGDYVE 145 (361)
T ss_dssp SSEEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCcEEE
Confidence 6789999999886544
No 101
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.81 E-value=0.0029 Score=62.67 Aligned_cols=208 Identities=13% Similarity=0.034 Sum_probs=127.5
Q ss_pred eeeeeeCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCeEEEEeC
Q psy731 66 VSLDKWHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDRLWALDS 145 (494)
Q Consensus 66 ~gv~v~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~LwvlD~ 145 (494)
-|+.+.++++|++-... |. |..+..+.+ +. -..+ .|.- .-..++.++ .++||+++-
T Consensus 58 qGL~~~~~~Ly~stG~~--g~---v~~iD~~Tg----kv--~~~~--l~~~----------~FgeGit~~-g~~Ly~ltw 113 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ--GT---LRQLSLESA----QP--VWME--RLGN----------IFAEGLASD-GERLYQLTW 113 (268)
T ss_dssp EEEEEETTEEEEEETTT--TE---EEECCSSCS----SC--SEEE--ECTT----------CCEEEEEEC-SSCEEEEES
T ss_pred ceEEEECCEEEEEcCCC--CE---EEEEECCCC----cE--EeEE--CCCC----------cceeEEEEe-CCEEEEEEc
Confidence 68888899999998774 22 777765543 10 1111 2221 112345565 569999976
Q ss_pred CCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeE
Q psy731 146 GVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHI 225 (494)
Q Consensus 146 G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~r 225 (494)
... ++.+||++|.++++++..+. ... .+.- ++..+|+|| +.+.|.++|.++.+..+
T Consensus 114 ~~~--------~v~V~D~~Tl~~~~ti~~~~-----eGw---GLt~-------Dg~~L~vSd-Gs~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 114 TEG--------LLFTWSGMPPQRERTTRYSG-----EGW---GLCY-------WNGKLVRSD-GGTMLTFHEPDGFALVG 169 (268)
T ss_dssp SSC--------EEEEEETTTTEEEEEEECSS-----CCC---CEEE-------ETTEEEEEC-SSSEEEEECTTTCCEEE
T ss_pred cCC--------EEEEEECCcCcEEEEEeCCC-----cee---EEec-------CCCEEEEEC-CCCEEEEEcCCCCeEEE
Confidence 655 89999999999999998765 111 2222 357899999 68899999988876544
Q ss_pred EecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEe
Q psy731 226 IHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIH 305 (494)
Q Consensus 226 v~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~ 305 (494)
-= .+ . .--.+-..++.+. |.++.+|+..-..+.|.|.|.++++.-+.-
T Consensus 170 ~I-------------~V----------~--~~g~~v~~lNeLe-------~~dG~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 170 AV-------------QV----------K--LRGQPVELINELE-------CANGVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp EE-------------EC----------E--ETTEECCCEEEEE-------EETTEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred EE-------------Ee----------C--CCCcccccccccE-------EeCCEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 30 00 0 0000111233332 235679988877889999999999865554
Q ss_pred cC-CcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechh
Q psy731 306 HN-YLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKV 364 (494)
Q Consensus 306 ~~-~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~ 364 (494)
.- ...++.... .....+-.+|||++|+ .+.||..==.=.++|.|.-++
T Consensus 218 dl~~L~~~~~~~-------~~~~~~vlNGIA~dp~----~~rlfVTGK~Wp~~~ev~~~~ 266 (268)
T 3nok_A 218 DASALTRAVAGQ-------VTNPEAVLNGIAVEPG----SGRIFMTGKLWPRLFEVRLDV 266 (268)
T ss_dssp ECHHHHHHHTTT-------CCCTTCCEEEEEECTT----TCCEEEEETTCSEEEEEEEEE
T ss_pred ECCCCccccccc-------ccCcCCceEEEEEcCC----CCEEEEeCCCCCceEEEEEEe
Confidence 32 122110000 0001134799999986 368888544444888887644
No 102
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.80 E-value=0.0032 Score=69.77 Aligned_cols=261 Identities=12% Similarity=0.123 Sum_probs=147.5
Q ss_pred eEEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEE
Q psy731 127 TSVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYI 205 (494)
Q Consensus 127 vsV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYI 205 (494)
..|..+..|..++ |||--.+. -|.+||.++++..+ |..... .-+...+..+..| .++.+||
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~---------Gl~~~d~~~~~~~~-~~~~~~--~l~~~~v~~i~~d------~~g~lwi 467 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAG---------GLSILHRNSGQVEN-FNQRNS--QLVNENVYAILPD------GEGNLWL 467 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTT---------EEEEEETTTCCEEE-ECTTTS--CCSCSCEEEEEEC------SSSCEEE
T ss_pred ccEEEEEEcCCCCEEEEEeCcC---------ceeEEeCCCCcEEE-eecCCC--CcCCCeeEEEEEC------CCCCEEE
Confidence 3577888999999 99853322 58999999988654 432210 0112233444443 4678999
Q ss_pred eeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEec
Q psy731 206 ADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIAD 285 (494)
Q Consensus 206 tDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D 285 (494)
+-. .+|.+||..+++..++... .+| ..+ .......|..|. ++.++|+-
T Consensus 468 gt~--~Gl~~~~~~~~~~~~~~~~---~~~--------------------~~~-~~~~i~~i~~d~------~g~lWigt 515 (795)
T 4a2l_A 468 GTL--SALVRFNPEQRSFTTIEKE---KDG--------------------TPV-VSKQITTLFRDS------HKRLWIGG 515 (795)
T ss_dssp EES--SCEEEEETTTTEEEECCBC---TTC--------------------CBC-CCCCEEEEEECT------TCCEEEEE
T ss_pred Eec--CceeEEeCCCCeEEEcccc---ccc--------------------ccc-CCceEEEEEECC------CCCEEEEe
Confidence 865 6899999999877666321 000 000 112244555552 46688876
Q ss_pred CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhh
Q psy731 286 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVL 365 (494)
Q Consensus 286 ~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L 365 (494)
. .||.+||.++++. ++.+.... + + + ....+.+|+.+++ ..|++.... .+++...+-
T Consensus 516 ~--~Gl~~~~~~~~~~-~~~~~~~~--~--~-l--------~~~~i~~i~~d~~-----g~lWigT~~--Gl~~~d~~~- 571 (795)
T 4a2l_A 516 E--EGLSVFKQEGLDI-QKASILPV--S--N-V--------TKLFTNCIYEASN-----GIIWVGTRE--GFYCFNEKD- 571 (795)
T ss_dssp S--SCEEEEEEETTEE-EECCCSCS--C--G-G--------GGSCEEEEEECTT-----SCEEEEESS--CEEEEETTT-
T ss_pred C--CceEEEeCCCCeE-EEecCCCC--C--C-C--------CCCeeEEEEECCC-----CCEEEEeCC--CceeECCCC-
Confidence 4 7999999998875 54432100 0 0 0 0123666777543 367776654 455554210
Q ss_pred cCCCcCccccccceEEecc-cCC-CCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEe---
Q psy731 366 QNRSLDFSRSNFDFKVMGS-RGT-GSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLI--- 440 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~-~G~-~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~--- 440 (494)
..|+.+.. .|. .....++..| ++|+|+++- .++|.++|++++ . +...... +.|.
T Consensus 572 -----------~~~~~~~~~~gl~~~~i~~i~~d-~~g~lWi~t--~~Gl~~~~~~~~-~-----~~~~~~~-dGl~~~~ 630 (795)
T 4a2l_A 572 -----------KQIKRYNTTNGLPNNVVYGILED-SFGRLWLST--NRGISCFNPETE-K-----FRNFTES-DGLQSNQ 630 (795)
T ss_dssp -----------TEEEEECGGGTCSCSCEEEEEEC-TTSCEEEEE--TTEEEEEETTTT-E-----EEEECGG-GTCSCSC
T ss_pred -----------CcEEEeCCCCCCchhheEEEEEC-CCCCEEEEc--CCceEEEcCCCC-c-----EEEcCCc-CCCcccc
Confidence 12232322 221 1223467789 899999997 589999999873 2 2222221 1111
Q ss_pred -cccceEEcCCceEEEEec-CchhhhcCCC--CCCcccEEEEEEec
Q psy731 441 -YPSDIRVDRTGVLWVLSN-KLPVFLYSKL--KPEDINVRIFKSTV 482 (494)
Q Consensus 441 -~pd~~~id~~g~Lwvlsn-rl~~~~~~~~--~~~~~nfrI~r~~~ 482 (494)
...++..+.+|.||+.++ .+-.|.-..+ +...++..|-.+.+
T Consensus 631 f~~~~~~~~~~G~l~~g~~~Gl~~~~p~~~~~~~~~~~v~it~~~v 676 (795)
T 4a2l_A 631 FNTASYCRTSVGQMYFGGINGITTFRPELLLDNPYTPPVVITKLQL 676 (795)
T ss_dssp EEEEEEEECTTSCEEEEETTEEEEECGGGCCCCCCCCCEEEEEEEE
T ss_pred CccCceeECCCCeEEEecCCceEEEcHHHccccCCCCCeEEEEEEE
Confidence 124566788999999973 3433322222 23345666666554
No 103
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.80 E-value=0.0022 Score=63.38 Aligned_cols=206 Identities=10% Similarity=0.043 Sum_probs=127.9
Q ss_pred cEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC--CCeEEEEEccCCceeEEecCccccCCCCCccccCC
Q psy731 167 MQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG--HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGG 244 (494)
Q Consensus 167 ~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~--~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g 244 (494)
+++++|+.+. ..|-+.+.++ ++.+|++... ...|.++|+++|+.-+--.
T Consensus 32 ~vv~~~phd~------~~ftqGL~~~-------~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~---------------- 82 (262)
T 3nol_A 32 QIVHSYPHDT------KAFTEGFFYR-------NGYFYESTGLNGRSSIRKVDIESGKTLQQIE---------------- 82 (262)
T ss_dssp EEEEEEECCT------TCEEEEEEEE-------TTEEEEEEEETTEEEEEEECTTTCCEEEEEE----------------
T ss_pred EEEEEecCCC------CcccceEEEE-------CCEEEEECCCCCCceEEEEECCCCcEEEEEe----------------
Confidence 4688886544 5677888875 3589998754 4589999999998755410
Q ss_pred ccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEE
Q psy731 245 EYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVN 324 (494)
Q Consensus 245 ~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~ 324 (494)
+.+.-+-.+|+++ +..+|+.+-..+-+.|||.++.+--+ .|.
T Consensus 83 -------------l~~~~FgeGit~~-------g~~ly~ltw~~~~v~v~D~~t~~~~~-------------ti~----- 124 (262)
T 3nol_A 83 -------------LGKRYFGEGISDW-------KDKIVGLTWKNGLGFVWNIRNLRQVR-------------SFN----- 124 (262)
T ss_dssp -------------CCTTCCEEEEEEE-------TTEEEEEESSSSEEEEEETTTCCEEE-------------EEE-----
T ss_pred -------------cCCccceeEEEEe-------CCEEEEEEeeCCEEEEEECccCcEEE-------------EEE-----
Confidence 1111111345665 35789998778889999998766321 111
Q ss_pred eeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCC-CCCCCeEEeeCCCCeE
Q psy731 325 FQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGT-GSQSGASSLDEETGVI 403 (494)
Q Consensus 325 f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~-~~qs~g~~~D~~~G~l 403 (494)
.+-.|.+|+++ ++.||-+-- +.+++.+.++-++- ...++ ++..|. -.....+... +|.|
T Consensus 125 ----~~~eG~glt~d----g~~L~~SdG-s~~i~~iDp~T~~v--------~~~I~-V~~~g~~~~~lNELe~~--~G~l 184 (262)
T 3nol_A 125 ----YDGEGWGLTHN----DQYLIMSDG-TPVLRFLDPESLTP--------VRTIT-VTAHGEELPELNELEWV--DGEI 184 (262)
T ss_dssp ----CSSCCCCEEEC----SSCEEECCS-SSEEEEECTTTCSE--------EEEEE-CEETTEECCCEEEEEEE--TTEE
T ss_pred ----CCCCceEEecC----CCEEEEECC-CCeEEEEcCCCCeE--------EEEEE-eccCCccccccceeEEE--CCEE
Confidence 11245677765 368988764 45787776654421 12222 222211 1111235554 6899
Q ss_pred EEeccCCCeEEEEeCCCCccccccceeeeeec---------CCeEecccceEEcCCc-eEEEEecCchhhh
Q psy731 404 FYALLVKSGVGCWNTFRGEEYNEKSMGLVAED---------NATLIYPSDIRVDRTG-VLWVLSNKLPVFL 464 (494)
Q Consensus 404 y~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d---------~~~l~~pd~~~id~~g-~Lwvlsnrl~~~~ 464 (494)
|.+....+.|.+.|+.+|... +.+-.. .+...=|+||++|+++ .|||+--+.|+..
T Consensus 185 yan~w~~~~I~vIDp~tG~V~-----~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ 250 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVT-----GIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVF 250 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEE-----EEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred EEEEccCCeEEEEECCCCcEE-----EEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceE
Confidence 999999999999999987321 222110 1122457899999754 7888887777644
No 104
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.80 E-value=0.0093 Score=60.76 Aligned_cols=117 Identities=9% Similarity=-0.116 Sum_probs=72.0
Q ss_pred CeEEEEeC-CCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC-------
Q psy731 138 DRLWALDS-GVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG------- 209 (494)
Q Consensus 138 ~~LwvlD~-G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~------- 209 (494)
.++||.|. +... .. .|.+||+.+++++.++.... .- .+++.- ++.++|++++.
T Consensus 33 ~~~yv~~~~~~~~--~~---~v~v~D~~t~~~~~~i~~g~--------~p-~i~~sp-----Dg~~lyv~n~~~~~~~rg 93 (373)
T 2mad_H 33 RRSYINLPAHHSA--II---QQWVLDAGSGSILGHVNGGF--------LP-NPVAAH-----SGSEFALASTSFSRIAKG 93 (373)
T ss_pred CEEEEeCCcccCC--cc---EEEEEECCCCeEEEEecCCC--------CC-CeEECC-----CCCEEEEEeccccccccC
Confidence 57899988 6541 11 78999999999988665322 22 666642 78999999862
Q ss_pred --CCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 210 --HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 210 --~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
.+.|.|||.++.+...-- .+.|.. .. ..+.....++++. +..++|++...
T Consensus 94 ~~~~~v~viD~~t~~~~~~i-------------~~~~~~---------~~-~~g~~p~~~~~sp-----DG~~l~v~n~~ 145 (373)
T 2mad_H 94 KRTDYVEVFDPVTFLPIADI-------------ELPDAP---------RF-DVGPYSWMNANTP-----NNADLLFFQFA 145 (373)
T ss_pred CCCCeEEEEECCCCcEEEEE-------------ECCCcc---------cc-ccCCCccceEECC-----CCCEEEEEecC
Confidence 456889999876553220 000000 00 0011233455543 46788988764
Q ss_pred -CCeEEEEEcCCCcEE
Q psy731 288 -HNHIVVYNYRTNDSH 302 (494)
Q Consensus 288 -~~gliVydl~~~~sw 302 (494)
.+.|.|+| ++++.-
T Consensus 146 ~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 146 AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CCCeEEEEE-CCCCEE
Confidence 57788899 887653
No 105
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.77 E-value=0.0099 Score=60.84 Aligned_cols=297 Identities=11% Similarity=0.097 Sum_probs=157.5
Q ss_pred CCCceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcE
Q psy731 123 ARNLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAF 202 (494)
Q Consensus 123 ~~~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~ 202 (494)
.++|....+|.++++++|||.+.... +|.+++..+++......+|+ +.......+.+++++-. --.+++
T Consensus 28 a~gL~~P~~ia~~pdG~llVter~~G--------~I~~v~~~~g~~~~v~~~~~-v~~~g~~GllGia~~Pd--f~~~g~ 96 (347)
T 3das_A 28 ATGLNSPWGLAPLPGGDLLVSSRDEA--------TITRVDAKTGRKTELGEVPG-VSPSGEGGLLGIALSPD--YASDHM 96 (347)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTC--------EEEEECTTTCCEEEEEECTT-CCCBTTBSEEEEEECTT--HHHHCE
T ss_pred ecCCCCceEEEEcCCCcEEEEEecCC--------EEEEEECCCCcEeeecccCc-eeecCCCCceeeEeccc--cccCCE
Confidence 46788899999999999999997555 78889887776644445665 34556788899998620 002567
Q ss_pred EEEeeC--CCCeEEEEEccCCce--eEEecCccccCCCCCccccCCccceeee-ecccccccccccceeeEEeeecCCCC
Q psy731 203 LYIADS--GHNHIVVYNYRTNDS--HIIHHNYLHFDPLFGDFTIGGEYSEFFQ-LKEKTDYTEESKFSNMVVDVTSANCD 277 (494)
Q Consensus 203 vYItDs--~~~~iIVyd~~~~~~--~rv~~~~~~~dp~~~~f~i~g~~~~~f~-l~~~~~~~~~s~~~~i~VD~~~~~c~ 277 (494)
+|++.+ ..+.|..|.+..+.. -++ ++...+|+ ++. .....-..|+++.
T Consensus 97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~-----------------~~~~~i~~~~p~----~~~H~g~~l~fgp------ 149 (347)
T 3das_A 97 VYAYFTSASDNRIVRMLYDEKKPSGEQL-----------------GAPDTVFRGIPK----GVIHNGGRIAFGP------ 149 (347)
T ss_dssp EEEEEECSSSEEEEEEEBCTTSCTTCCB-----------------CCCEEEEEEECC----CSSCCCCCEEECT------
T ss_pred EEEEEecCCCCEEEEEEeCCCCcccccC-----------------CCcEEEEEcCCC----CCCccCccccCCC------
Confidence 787654 445676666654321 000 01111222 110 1112234566653
Q ss_pred CcEEEEec--CCCCeEEEE--EcCCCcEEEEecCCcccCCCCcceEEcCEEeee-ecceeeeeeccCCCCCceeEEEeeC
Q psy731 278 DAFLYIAD--SGHNHIVVY--NYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQW-QTGIHGMSLSPLTRDNFRVMYFHPL 352 (494)
Q Consensus 278 ~~~~YI~D--~~~~gliVy--dl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~-~~Gi~gIaLsp~~~~g~r~LYf~pl 352 (494)
++++||+- .+... .-- +...++.||+.-..--| ....| .+.+-+.+ .-+..||+++|+ | .||++-.
T Consensus 150 DG~Lyvt~Gd~~~~~-~~qd~~~~~G~IlRi~~dG~ip--~~nPf-~~~~i~a~G~RNp~Gla~dp~---G--~L~~~d~ 220 (347)
T 3das_A 150 DKMLYAGTGESGDTG-LSQDRKSLGGKILRMTPDGEPA--PGNPF-PGSPVYSYGHRNVQGLAWDDK---Q--RLFASEF 220 (347)
T ss_dssp TSCEEEECBCTTCGG-GTTCTTCSTTCEEEECTTSSBC--TTCSS-TTCCEEEBCCSBCCEEEECTT---C--CEEEEEC
T ss_pred CCCEEEEECCCCCCc-cccCCCCCCCEEEEEeCCCCcc--CCCCC-CCCeEEeeCCCCcceEEECCC---C--CEEEEec
Confidence 46788883 21110 000 12356777776432111 01111 01111111 123578999874 3 6888554
Q ss_pred CC---cceEeeechhhcCCCcC---------ccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 353 AS---TTEFAVTTKVLQNRSLD---------FSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 353 ss---~~ly~V~T~~L~~~~~~---------~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
.. ..+..|..- ...- ......-+..++.- .....||++. +|.+|.+.+....|.+...+.
T Consensus 221 g~~~~deln~i~~G----~nyGwP~~~g~~~~~~~~~P~~~~~~~--~~ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~ 292 (347)
T 3das_A 221 GQDTWDELNAIKPG----DNYGWPEAEGKGGGSGFHDPVAQWSTD--EASPSGIAYA--EGSVWMAGLRGERLWRIPLKG 292 (347)
T ss_dssp CSSSCEEEEEECTT----CBCCTTTCCSSCCCTTCCCCSEEECTT--TCCEEEEEEE--TTEEEEEESTTCSEEEEEEET
T ss_pred CCCCCceeeEEcCC----CEecCCcccCCCCCccccCCcEecCCC--CCCCcceEEE--cCceeeccccCCEEEEEEecC
Confidence 33 234444211 0100 01111222333311 0234688887 699999999999999887654
Q ss_pred CccccccceeeeeecCCeEecccceEEcCCceEEEEecCchhhhcCCCCCCcccEEEEEEec
Q psy731 421 GEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLSNKLPVFLYSKLKPEDINVRIFKSTV 482 (494)
Q Consensus 421 ~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvlsnrl~~~~~~~~~~~~~nfrI~r~~~ 482 (494)
+.... ..+.+..+ ...=|.++.+++||.|||++++-. ++-++.+-.=||+|+.+
T Consensus 293 ~~~~~--~~e~~l~~--~~gR~~dv~~~pDG~lyv~td~~~----g~g~p~~~ddri~r~~~ 346 (347)
T 3das_A 293 TAAAA--DPQAFLEG--EYGRLRTVAPAGGDKLWLVTSNTD----GRGDAKGGDDRILELEV 346 (347)
T ss_dssp TEESS--CCEEESTT--TSSCEEEEEEEETTEEEEEECTTS----SSSCCCTTCSCEEEEEE
T ss_pred Cceec--ceEEeecC--CCCCccEEEECCCCcEEEEEcCCC----CCCCCCCCCCEEEEEeC
Confidence 21110 11223332 112378999999999999986543 22233333447777764
No 106
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.77 E-value=0.0091 Score=62.86 Aligned_cols=88 Identities=15% Similarity=0.243 Sum_probs=62.7
Q ss_pred CCceEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccc-cccCCccceEEEeecCCCCCcE
Q psy731 124 RNLTSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDY-TEESKFSNMVVDVTSANCDNAF 202 (494)
Q Consensus 124 ~~lvsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~-~~~S~l~d~vVD~~~~~c~~~~ 202 (494)
++|...-+|.++++++|||.+.... +|++++..+++......+++.... .....|.+++++- .-..+++
T Consensus 24 ~~l~~P~~~a~~pdG~l~V~e~~gg--------~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P--df~~~g~ 93 (454)
T 1cru_A 24 SNLNKPHALLWGPDNQIWLTERATG--------KILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP--DFKNNPY 93 (454)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTC--------EEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT--TTTTSCE
T ss_pred CCCCCceEEEEcCCCcEEEEEcCCC--------EEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC--CcCcCCE
Confidence 4688888999999999999997654 799998877776555667762111 2456777888862 1223789
Q ss_pred EEEeeCC------------CCeEEEEEccCC
Q psy731 203 LYIADSG------------HNHIVVYNYRTN 221 (494)
Q Consensus 203 vYItDs~------------~~~iIVyd~~~~ 221 (494)
+|++++. ...|..|+++.+
T Consensus 94 lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~ 124 (454)
T 1cru_A 94 IYISGTFKNPKSTDKELPNQTIIRRYTYNKS 124 (454)
T ss_dssp EEEEEEEECTTC--CCSCEEEEEEEEEEETT
T ss_pred EEEEEeccccCCCccccccccEEEEEEECCC
Confidence 9999874 346777776543
No 107
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.76 E-value=0.00066 Score=67.34 Aligned_cols=209 Identities=10% Similarity=0.039 Sum_probs=129.2
Q ss_pred cEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCcc
Q psy731 167 MQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEY 246 (494)
Q Consensus 167 ~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~ 246 (494)
+++++|..+. ..|-+.+.++ ++.+|++....+.|-++|+++|+.-+-- +
T Consensus 44 ~Vv~~~phd~------~~ftqGL~~~-------~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l--------------- 92 (268)
T 3nok_A 44 HIIREYPHAT------NAFTQGLVFH-------QGHFFESTGHQGTLRQLSLESAQPVWME---R--------------- 92 (268)
T ss_dssp EEEEEEECCT------TCCEEEEEEE-------TTEEEEEETTTTEEEECCSSCSSCSEEE---E---------------
T ss_pred EEEEEEcCCC------ccccceEEEE-------CCEEEEEcCCCCEEEEEECCCCcEEeEE---C---------------
Confidence 5688886654 5677888875 4799999999888999999999875541 1
Q ss_pred ceeeeecccccccccccc-eeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEe
Q psy731 247 SEFFQLKEKTDYTEESKF-SNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNF 325 (494)
Q Consensus 247 ~~~f~l~~~~~~~~~s~~-~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f 325 (494)
.+ ..| .+++++ +..+|+.+-..+-+.|||.++.+--+ .|.+
T Consensus 93 ------------~~-~~FgeGit~~-------g~~Ly~ltw~~~~v~V~D~~Tl~~~~-------------ti~~----- 134 (268)
T 3nok_A 93 ------------LG-NIFAEGLASD-------GERLYQLTWTEGLLFTWSGMPPQRER-------------TTRY----- 134 (268)
T ss_dssp ------------CT-TCCEEEEEEC-------SSCEEEEESSSCEEEEEETTTTEEEE-------------EEEC-----
T ss_pred ------------CC-CcceeEEEEe-------CCEEEEEEccCCEEEEEECCcCcEEE-------------EEeC-----
Confidence 11 112 235554 34689998778889999998766321 1111
Q ss_pred eeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCC-CCCCCeEEeeCCCCeEE
Q psy731 326 QWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGT-GSQSGASSLDEETGVIF 404 (494)
Q Consensus 326 ~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~-~~qs~g~~~D~~~G~ly 404 (494)
+-.|.+|+++ ++.||.+-- +.+++.+.++-++- ...++ ++..|. -.....+... +|.||
T Consensus 135 ----~~eGwGLt~D----g~~L~vSdG-s~~l~~iDp~T~~v--------~~~I~-V~~~g~~v~~lNeLe~~--dG~ly 194 (268)
T 3nok_A 135 ----SGEGWGLCYW----NGKLVRSDG-GTMLTFHEPDGFAL--------VGAVQ-VKLRGQPVELINELECA--NGVIY 194 (268)
T ss_dssp ----SSCCCCEEEE----TTEEEEECS-SSEEEEECTTTCCE--------EEEEE-CEETTEECCCEEEEEEE--TTEEE
T ss_pred ----CCceeEEecC----CCEEEEECC-CCEEEEEcCCCCeE--------EEEEE-eCCCCcccccccccEEe--CCEEE
Confidence 1124666665 368999874 55888887665421 12222 232221 1122344554 78999
Q ss_pred EeccCCCeEEEEeCCCCccccccceeeeee-----cCCeEecccceEEcCCc-eEEEEecCchhhh
Q psy731 405 YALLVKSGVGCWNTFRGEEYNEKSMGLVAE-----DNATLIYPSDIRVDRTG-VLWVLSNKLPVFL 464 (494)
Q Consensus 405 ~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~-----d~~~l~~pd~~~id~~g-~Lwvlsnrl~~~~ 464 (494)
.+....+.|.+.|+++|.....-.+.-+.. ......=|+||+.|+++ .|||+--+.|+.+
T Consensus 195 anvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ 260 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLF 260 (268)
T ss_dssp EEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEE
T ss_pred EEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceE
Confidence 999899999999999874221111110100 00112357899999855 7888766666543
No 108
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.71 E-value=0.0031 Score=69.80 Aligned_cols=232 Identities=16% Similarity=0.180 Sum_probs=136.5
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
..|..+..|..++||+--.+. .|.+||.++++..+ +..+. .+...+..+..| .++.+||+
T Consensus 407 ~~v~~i~~d~~g~lWigt~~~---------Gl~~~~~~~~~~~~-~~~~~----~~~~~v~~i~~d------~~g~lwig 466 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWFGTYLG---------NISYYNTRLKKFQI-IELEK----NELLDVRVFYED------KNKKIWIG 466 (781)
T ss_dssp SBEEEEEECTTSCEEEEETTE---------EEEEECSSSCEEEE-CCSTT----TCCCCEEEEEEC------TTSEEEEE
T ss_pred cceEEEEECCCCCEEEEeccC---------CEEEEcCCCCcEEE-eccCC----CCCCeEEEEEEC------CCCCEEEE
Confidence 357888899999999943222 58999998887643 33211 122334445454 57889998
Q ss_pred eCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 207 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
-. .+|.+||..+++..++....- ... .......|..|. ++.++|+-.
T Consensus 467 t~--~Gl~~~~~~~~~~~~~~~~~~------------------------~~~-~~~~i~~i~~d~------~g~lWigt~ 513 (781)
T 3v9f_A 467 TH--AGVFVIDLASKKVIHHYDTSN------------------------SQL-LENFVRSIAQDS------EGRFWIGTF 513 (781)
T ss_dssp ET--TEEEEEESSSSSCCEEECTTT------------------------SSC-SCSCEEEEEECT------TCCEEEEES
T ss_pred EC--CceEEEeCCCCeEEecccCcc------------------------ccc-ccceeEEEEEcC------CCCEEEEEc
Confidence 65 789999999988766632110 000 012345566663 456788742
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcce-Eeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTE-FAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~l-y~V~T~~L 365 (494)
+.||..||.++++..++.+..-- | ..-|..|+.+++ ..|++....+ + ++...+
T Consensus 514 -~~Gl~~~~~~~~~~~~~~~~~~l--~--------------~~~i~~i~~d~~-----g~lWi~T~~G--lv~~~d~~-- 567 (781)
T 3v9f_A 514 -GGGVGIYTPDMQLVRKFNQYEGF--C--------------SNTINQIYRSSK-----GQMWLATGEG--LVCFPSAR-- 567 (781)
T ss_dssp -SSCEEEECTTCCEEEEECTTTTC--S--------------CSCEEEEEECTT-----SCEEEEETTE--EEEESCTT--
T ss_pred -CCCEEEEeCCCCeEEEccCCCCC--C--------------CCeeEEEEECCC-----CCEEEEECCC--ceEEECCC--
Confidence 46899999988765555431100 0 122566776543 3678766533 4 444221
Q ss_pred cCCCcCccccccceEEecc-cCC-CCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEe---
Q psy731 366 QNRSLDFSRSNFDFKVMGS-RGT-GSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLI--- 440 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~-~G~-~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~--- 440 (494)
. ..++.+.. .|. .....++..| ++|+|+++- .++|.|++++++ . +...... +.|.
T Consensus 568 -~---------~~~~~~~~~~gl~~~~i~~i~~d-~~g~lW~~t--~~Gl~~~~~~~~-~-----~~~~~~~-dGl~~~~ 627 (781)
T 3v9f_A 568 -N---------FDYQVFQRKEGLPNTHIRAISED-KNGNIWAST--NTGISCYITSKK-C-----FYTYDHS-NNIPQGS 627 (781)
T ss_dssp -T---------CCCEEECGGGTCSCCCCCEEEEC-SSSCEEEEC--SSCEEEEETTTT-E-----EEEECGG-GTCCSSC
T ss_pred -C---------CcEEEccccCCCCCceEEEEEEC-CCCCEEEEc--CCceEEEECCCC-c-----eEEeccc-CCccccc
Confidence 0 12333332 221 1234678899 899999996 678999999873 2 2222211 1111
Q ss_pred -cccceEEcCCceEEEEe
Q psy731 441 -YPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 441 -~pd~~~id~~g~Lwvls 457 (494)
.+..+..+++|.||+-+
T Consensus 628 f~~~~~~~~~~G~l~~g~ 645 (781)
T 3v9f_A 628 FISGCVTKDHNGLIYFGS 645 (781)
T ss_dssp EEEEEEEECTTSCEEEEE
T ss_pred cccCceEECCCCEEEEEC
Confidence 13456678899999987
No 109
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.70 E-value=0.0028 Score=65.23 Aligned_cols=69 Identities=9% Similarity=-0.141 Sum_probs=52.0
Q ss_pred CeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC---------
Q psy731 138 DRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS--------- 208 (494)
Q Consensus 138 ~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs--------- 208 (494)
.++||.+.+... ... .+.++|+.|+++++++..+.. - .++++ .+..++|++++
T Consensus 32 ~~~yV~~~~~~~---~~d-~vsvID~~t~~v~~~i~vG~~--------P-~i~~s-----pDg~~lyVan~~~~r~~~G~ 93 (368)
T 1mda_H 32 RRSHITLPAYFA---GTT-ENWVSCAGCGVTLGHSLGAFL--------S-LAVAG-----HSGSDFALASTSFARSAKGK 93 (368)
T ss_dssp TEEEEEECTTTC---SSE-EEEEEETTTTEEEEEEEECTT--------C-EEEEC-----TTSSCEEEEEEEETTTTSSS
T ss_pred CeEEEECCccCC---ccc-eEEEEECCCCeEEEEEeCCCC--------C-ceEEC-----CCCCEEEEEcccccccccCC
Confidence 589999887541 111 788999999999999987661 1 46664 27889999995
Q ss_pred CCCeEEEEEccCCcee
Q psy731 209 GHNHIVVYNYRTNDSH 224 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~ 224 (494)
..+.|-|+|+.+++.-
T Consensus 94 ~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 94 RTDYVEVFDPVTFLPI 109 (368)
T ss_dssp EEEEEEEECTTTCCEE
T ss_pred CCCEEEEEECCCCCEE
Confidence 3578999999998863
No 110
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.67 E-value=0.019 Score=56.21 Aligned_cols=116 Identities=9% Similarity=0.139 Sum_probs=79.5
Q ss_pred eeeeeee--CCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCCeEEE
Q psy731 65 PVSLDKW--HDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCDRLWA 142 (494)
Q Consensus 65 p~gv~v~--~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~~Lwv 142 (494)
+.|++.. ++++|+..=. +..|.+++.+ + ..++-.|- .++-...+|.++..+++||
T Consensus 29 lSGla~~~~~~~L~aV~d~-----~~~I~~ld~~-g---------~v~~~i~l--------~g~~D~EGIa~~~~g~~~v 85 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK-----PAAIVEMTTN-G---------DLIRTIPL--------DFVKDLETIEYIGDNQFVI 85 (255)
T ss_dssp EEEEEEETTTTEEEEEEET-----TEEEEEEETT-C---------CEEEEEEC--------SSCSSEEEEEECSTTEEEE
T ss_pred cceeEEeCCCCEEEEEECC-----CCeEEEEeCC-C---------CEEEEEec--------CCCCChHHeEEeCCCEEEE
Confidence 8899995 6789887633 6678888864 2 13333332 2345577888889999999
Q ss_pred EeCCCCCCCCCCCCEEEEEECCCCc---EEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCC-eEEEEE
Q psy731 143 LDSGVVEGKMEQPPSVQVYDLRQQM---QIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHN-HIVVYN 217 (494)
Q Consensus 143 lD~G~~~~~~~~~Pklv~~dl~t~~---vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~-~iIVyd 217 (494)
.|-+.. .|.+|++.++. .+.++.++- .....+..+..+++|- ....+|++--... +|+.|+
T Consensus 86 s~E~~~--------~l~~~~v~~~~~i~~~~~~~~~~-~~~~~N~g~EGLA~d~-----~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 86 SDERDY--------AIYVISLTPNSEVKILKKIKIPL-QESPTNCGFEGLAYSR-----QDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EETTTT--------EEEEEEECTTCCEEEEEEEECCC-SSCCCSSCCEEEEEET-----TTTEEEEEEESSSEEEEEEE
T ss_pred EECCCC--------cEEEEEcCCCCeeeeeeeecccc-ccccccCCcceEEEeC-----CCCEEEEEECcCCceEEEEc
Confidence 988775 78888877654 457776653 1234677788999874 4557777766555 677766
No 111
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.62 E-value=0.013 Score=56.98 Aligned_cols=126 Identities=6% Similarity=-0.030 Sum_probs=82.7
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.+..+.++++|++++ .+.. .+..||. +++++.++..+.. ..+.+..+. .++.++|++
T Consensus 38 ~~~~~~~~pdG~ilv--s~~~--------~V~~~d~-~G~~~W~~~~~~~------~~~~~~~~~------~dG~~lv~~ 94 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYSK--------GAKMITR-DGRELWNIAAPAG------CEMQTARIL------PDGNALVAW 94 (276)
T ss_dssp CCCEEEECTTSCEEE--ECBS--------EEEEECT-TSCEEEEEECCTT------CEEEEEEEC------TTSCEEEEE
T ss_pred CCcCeEECCCCCEEE--eCCC--------CEEEECC-CCCEEEEEcCCCC------ccccccEEC------CCCCEEEEe
Confidence 356667888999999 2222 6999999 8999999987641 122333332 467889999
Q ss_pred CC-CCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 208 SG-HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 208 s~-~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
++ ...++.+|.+....|++.-.. ....+......+.++. ++-.++++.
T Consensus 95 ~~~~~~v~~vd~~Gk~l~~~~~~~-------------------------~~~~~~~~~~~v~~~~------~G~~lv~~~ 143 (276)
T 3no2_A 95 CGHPSTILEVNMKGEVLSKTEFET-------------------------GIERPHAQFRQINKNK------KGNYLVPLF 143 (276)
T ss_dssp ESTTEEEEEECTTSCEEEEEEECC-------------------------SCSSGGGSCSCCEECT------TSCEEEEET
T ss_pred cCCCCEEEEEeCCCCEEEEEeccC-------------------------CCCcccccccCceECC------CCCEEEEec
Confidence 98 778999998666677772100 0000001122233332 334567888
Q ss_pred CCCeEEEEEcCCCcEEEEecC
Q psy731 287 GHNHIVVYNYRTNDSHIIHHN 307 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~ 307 (494)
....+++||.+.+..|++...
T Consensus 144 ~~~~v~~~d~~G~~~w~~~~~ 164 (276)
T 3no2_A 144 ATSEVREIAPNGQLLNSVKLS 164 (276)
T ss_dssp TTTEEEEECTTSCEEEEEECS
T ss_pred CCCEEEEECCCCCEEEEEECC
Confidence 889999999998899999764
No 112
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.62 E-value=0.0059 Score=60.67 Aligned_cols=246 Identities=11% Similarity=0.083 Sum_probs=129.4
Q ss_pred EEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECC-CCcEEEEEEcCCCccccccCCccceEEEeecCCCCCc--EE
Q psy731 128 SVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLR-QQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNA--FL 203 (494)
Q Consensus 128 sV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~-t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~--~v 203 (494)
.+..+.++++++ |++.+.+ .+.+||+. ++++.+....+. .. ....++++ .++. ++
T Consensus 41 ~~~~~a~spdg~~l~~~~~~----------~v~~~~~~~~g~~~~~~~~~~-----~g-~~~~~~~s-----pdg~~l~~ 99 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK----------KWSSFAVKSPTEIVHEASHPI-----GG-HPRANDAD-----TNTRAIFL 99 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT----------EEEEEEEEETTEEEEEEEEEC-----CS-SGGGGCTT-----SCCEEEEE
T ss_pred CCcEEEECCCCCEEEEEccc----------eEEEEEECCCCCEEEeeEeec-----CC-CCccEEEC-----CCCCEEEE
Confidence 345566777775 7777654 47778886 787765444332 11 12334442 1344 57
Q ss_pred EEee-------C-----CCCeEEEEEcc-CCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEE
Q psy731 204 YIAD-------S-----GHNHIVVYNYR-TNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVV 269 (494)
Q Consensus 204 YItD-------s-----~~~~iIVyd~~-~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~V 269 (494)
|++| + ..+.+.||++. +|+.-+. .... .........+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~---------------------------~~~~~~~~~~~~ 152 (365)
T 1jof_A 100 LAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE---------------------------YQENTGIHGMVF 152 (365)
T ss_dssp EECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE---------------------------CCTTCCEEEEEE
T ss_pred EEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE---------------------------eCCCCcceEEEE
Confidence 7777 2 45678899887 4544322 1100 001223455566
Q ss_pred eeecCCCCCcEEEEecCCCCeEEEEEcC-CCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEE
Q psy731 270 DVTSANCDDAFLYIADSGHNHIVVYNYR-TNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMY 348 (494)
Q Consensus 270 D~~~~~c~~~~~YI~D~~~~gliVydl~-~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LY 348 (494)
+. +..++|++|.+...|.+||+. +++.-.+..-.+ |. . ..+..++++||+ ++.||
T Consensus 153 sp-----dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~---~~------~------g~~p~~~~~spd----g~~l~ 208 (365)
T 1jof_A 153 DP-----TETYLYSADLTANKLWTHRKLASGEVELVGSVDA---PD------P------GDHPRWVAMHPT----GNYLY 208 (365)
T ss_dssp CT-----TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC---SS------T------TCCEEEEEECTT----SSEEE
T ss_pred CC-----CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEec---CC------C------CCCCCEeEECCC----CCEEE
Confidence 53 356899999888899999998 665422211000 00 0 134667999997 37899
Q ss_pred EeeC-CCc-ceEeeechhhcCCCcCccccccceEEec--ccCCCC------CCCeEE-eeCCCC-eEEEeccCCC-----
Q psy731 349 FHPL-AST-TEFAVTTKVLQNRSLDFSRSNFDFKVMG--SRGTGS------QSGASS-LDEETG-VIFYALLVKS----- 411 (494)
Q Consensus 349 f~pl-ss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G--~~G~~~------qs~g~~-~D~~~G-~ly~~~~~~~----- 411 (494)
...- +++ .+|.+..+ +..+.. ....+..+. ..|... ...+++ ++ .+| .||.+....+
T Consensus 209 v~~~~~~~v~v~~~~~~---~g~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~s-pdG~~l~v~~~~~~~~~~~ 282 (365)
T 1jof_A 209 ALMEAGNRICEYVIDPA---THMPVY--THHSFPLIPPGIPDRDPETGKGLYRADVCALT-FSGKYMFASSRANKFELQG 282 (365)
T ss_dssp EEETTTTEEEEEEECTT---TCCEEE--EEEEEESSCTTCCCBCTTTSSBSEEEEEEEEC-TTSSEEEEEEEESSTTSCC
T ss_pred EEECCCCeEEEEEEeCC---CCcEEE--ccceEEcCCCCcCCcccccccccccccEEEEC-CCCCEEEEECCCCCCCCCC
Confidence 8653 332 45554321 111000 000111111 011111 245788 98 566 6888887666
Q ss_pred eEEEEeCC-CCccccccceeeeee-cCCeEecccceEEcC---Cc-eEEEEe
Q psy731 412 GVGCWNTF-RGEEYNEKSMGLVAE-DNATLIYPSDIRVDR---TG-VLWVLS 457 (494)
Q Consensus 412 aI~~w~~~-~~~~~~~~~~~~v~~-d~~~l~~pd~~~id~---~g-~Lwvls 457 (494)
.|..|+.+ +| .+ ..+.. -...-..|.++.+.+ +| +||+..
T Consensus 283 ~i~v~~~~~~g-~~-----~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~ 328 (365)
T 1jof_A 283 YIAGFKLRDCG-SI-----EKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD 328 (365)
T ss_dssp EEEEEEECTTS-CE-----EEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred eEEEEEECCCC-CE-----EEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence 89999874 32 22 21110 000113577777777 45 677764
No 113
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.60 E-value=0.0065 Score=62.50 Aligned_cols=154 Identities=13% Similarity=0.123 Sum_probs=83.4
Q ss_pred EEEEecCC--CCeEEEEEc--CCCcEEEEecCCcccCCCCcceEEcCEEeee-ecceeeeee--ccCCCCCceeEEEeeC
Q psy731 280 FLYIADSG--HNHIVVYNY--RTNDSHIIHHNYLHFDPLFGDFTIGGVNFQW-QTGIHGMSL--SPLTRDNFRVMYFHPL 352 (494)
Q Consensus 280 ~~YI~D~~--~~gliVydl--~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~-~~Gi~gIaL--sp~~~~g~r~LYf~pl 352 (494)
.||++|-. .+.|-+|++ .++. ++..-..-. ++.- ...+.||++ +|.. |.-.+|..-=
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~-------------pv~t~~~~pyGlcly~~~~~--g~~yafV~~k 151 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDH-------------PIATAINEVYGFTLYHSQKT--GKYYAMVTGK 151 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTS-------------CEECCCSSCCCEEEEECTTT--CCEEEEEECS
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCc-eeecccccc-------------CcCCCCCCeeEEEEEecCCC--CcEEEEEECC
Confidence 68999988 899999977 3433 222111000 0000 134677999 6642 3224555333
Q ss_pred CCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeC--CCCccccccce
Q psy731 353 AST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNT--FRGEEYNEKSM 429 (494)
Q Consensus 353 ss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~--~~~~~~~~~~~ 429 (494)
.++ ..|.+.. -.+... . .+.++.+. . .+|..|+++|+++|.||+++-. .+|++++. .+ .. +.
T Consensus 152 ~G~~~q~~l~~--~~~g~~-~---~~lVR~f~-l--gsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~--~~---~~ 216 (355)
T 3amr_A 152 EGEFEQYELKA--DKNGYI-S---GKKVRAFK-M--NSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDG--GS---NG 216 (355)
T ss_dssp SSEEEEEEEEE--CTTSCE-E---EEEEEEEE-C--SSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTS--CS---CC
T ss_pred CCeEEEEEEEe--CCCCcc-c---ceEEEEec-C--CCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCC--CC---Cc
Confidence 331 2222311 111111 1 12222222 2 3689999999999999999988 67999994 44 11 11
Q ss_pred eeeee-cCCeEe-cccceEEc--C--CceEEEEe---cCchhhh
Q psy731 430 GLVAE-DNATLI-YPSDIRVD--R--TGVLWVLS---NKLPVFL 464 (494)
Q Consensus 430 ~~v~~-d~~~l~-~pd~~~id--~--~g~Lwvls---nrl~~~~ 464 (494)
.+|.. +...|. -|.||.|. . +|+|++++ |.|..|-
T Consensus 217 ~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 217 TVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred eEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEE
Confidence 23322 123444 68899984 3 25788876 4565554
No 114
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.54 E-value=0.0087 Score=59.10 Aligned_cols=200 Identities=10% Similarity=0.044 Sum_probs=111.4
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
-.+++..+ +++||+=.. .. +.-.|.++|++|+++++++.+++. -|-..+.++ +..+|+++
T Consensus 44 ftqGL~~~-~~~LyestG-~~-----g~S~v~~vD~~Tgkv~~~~~l~~~------~FgeGit~~-------g~~ly~lt 103 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTG-LN-----GRSSIRKVDIESGKTLQQIELGKR------YFGEGISDW-------KDKIVGLT 103 (262)
T ss_dssp EEEEEEEE-TTEEEEEEE-ET-----TEEEEEEECTTTCCEEEEEECCTT------CCEEEEEEE-------TTEEEEEE
T ss_pred ccceEEEE-CCEEEEECC-CC-----CCceEEEEECCCCcEEEEEecCCc------cceeEEEEe-------CCEEEEEE
Confidence 35677777 579998532 11 122799999999999999998761 222445554 46899999
Q ss_pred CCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 208 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
-..+.+.|||.++.+.-+- |.+.| ++ -.++-| +..+|++| +
T Consensus 104 w~~~~v~v~D~~t~~~~~t-------------i~~~~---------------eG---~glt~d-------g~~L~~Sd-G 144 (262)
T 3nol_A 104 WKNGLGFVWNIRNLRQVRS-------------FNYDG---------------EG---WGLTHN-------DQYLIMSD-G 144 (262)
T ss_dssp SSSSEEEEEETTTCCEEEE-------------EECSS---------------CC---CCEEEC-------SSCEEECC-S
T ss_pred eeCCEEEEEECccCcEEEE-------------EECCC---------------Cc---eEEecC-------CCEEEEEC-C
Confidence 8899999999988776432 11111 01 122222 46799999 5
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcC
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQN 367 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~ 367 (494)
...|.++|-++.+.-+--.- .-+|.++. +++.++.. + | .||..---+..+..|..+-.+-
T Consensus 145 s~~i~~iDp~T~~v~~~I~V-----------~~~g~~~~---~lNELe~~-~---G--~lyan~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 145 TPVLRFLDPESLTPVRTITV-----------TAHGEELP---ELNELEWV-D---G--EIFANVWQTNKIVRIDPETGKV 204 (262)
T ss_dssp SSEEEEECTTTCSEEEEEEC-----------EETTEECC---CEEEEEEE-T---T--EEEEEETTSSEEEEECTTTCBE
T ss_pred CCeEEEEcCCCCeEEEEEEe-----------ccCCcccc---ccceeEEE-C---C--EEEEEEccCCeEEEEECCCCcE
Confidence 77899998887664322111 01233321 23334432 1 2 4666554455666665432211
Q ss_pred CC-cCccccccceEEecccCCCCCCCeEEeeCCCCeEEEecc
Q psy731 368 RS-LDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALL 408 (494)
Q Consensus 368 ~~-~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~ 408 (494)
.. ++.+.+....+..... ..-.-|+|+||+++.||++--
T Consensus 205 ~~~Id~~~L~~~~~~~~~~--~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 205 TGIIDLNGILAEAGPLPSP--IDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEECTTGGGGSCSCCSS--CCCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCcCccccccccCc--CCceEEEEEcCCCCEEEEECC
Confidence 00 0111111100000001 123478999988889888654
No 115
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.50 E-value=0.006 Score=67.46 Aligned_cols=234 Identities=14% Similarity=0.157 Sum_probs=132.9
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
..|..+..|..++|||---+. -|.+||..+++..+ |.-+. .-+...+.++..| .++.+||.
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~---------Gl~~~~~~~~~~~~-~~~~~---~~~~~~v~~i~~d------~~g~lWig 423 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGG---------GINVFENGKRVAIY-NKENR---ELLSNSVLCSLKD------SEGNLWFG 423 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSS---------CEEEEETTEEEEEC-C--------CCCSBEEEEEEC------TTSCEEEE
T ss_pred cceEEEEEcCCCCEEEEeCCC---------cEEEEECCCCeEEE-ccCCC---CCCCcceEEEEEC------CCCCEEEE
Confidence 347888999999999863232 37888987765432 21111 0112233344443 46778886
Q ss_pred eCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 207 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
- ..++|.+||.++++..++.... ........|..|. ++.++|+-.
T Consensus 424 t-~~~Gl~~~~~~~~~~~~~~~~~----------------------------~~~~~v~~i~~d~------~g~lwigt~ 468 (781)
T 3v9f_A 424 T-YLGNISYYNTRLKKFQIIELEK----------------------------NELLDVRVFYEDK------NKKIWIGTH 468 (781)
T ss_dssp E-TTEEEEEECSSSCEEEECCSTT----------------------------TCCCCEEEEEECT------TSEEEEEET
T ss_pred e-ccCCEEEEcCCCCcEEEeccCC----------------------------CCCCeEEEEEECC------CCCEEEEEC
Confidence 3 3468999999988776662210 0111233445542 467888753
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhc
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQ 366 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~ 366 (494)
.||.+||.++++..++.+.. ..+.. ..-+..|+.+++ ..|++....+ -+|+...+-
T Consensus 469 --~Gl~~~~~~~~~~~~~~~~~--~~~~~------------~~~i~~i~~d~~-----g~lWigt~~~-Gl~~~~~~~-- 524 (781)
T 3v9f_A 469 --AGVFVIDLASKKVIHHYDTS--NSQLL------------ENFVRSIAQDSE-----GRFWIGTFGG-GVGIYTPDM-- 524 (781)
T ss_dssp --TEEEEEESSSSSCCEEECTT--TSSCS------------CSCEEEEEECTT-----CCEEEEESSS-CEEEECTTC--
T ss_pred --CceEEEeCCCCeEEecccCc--ccccc------------cceeEEEEEcCC-----CCEEEEEcCC-CEEEEeCCC--
Confidence 79999999988755554321 00000 123566777543 3788876632 366653210
Q ss_pred CCCcCccccccceEEecc-cCC-CCCCCeEEeeCCCCeEEEeccCCCeE-EEEeCCCCccccccceeeeeecCCeE--ec
Q psy731 367 NRSLDFSRSNFDFKVMGS-RGT-GSQSGASSLDEETGVIFYALLVKSGV-GCWNTFRGEEYNEKSMGLVAEDNATL--IY 441 (494)
Q Consensus 367 ~~~~~~~~~~~~v~~~G~-~G~-~~qs~g~~~D~~~G~ly~~~~~~~aI-~~w~~~~~~~~~~~~~~~v~~d~~~l--~~ 441 (494)
..++.+.. .|. .....++..| .+|+|+++.. +++ .++|+.++ .+ ...... ..| ..
T Consensus 525 ----------~~~~~~~~~~~l~~~~i~~i~~d-~~g~lWi~T~--~Glv~~~d~~~~-~~-----~~~~~~-~gl~~~~ 584 (781)
T 3v9f_A 525 ----------QLVRKFNQYEGFCSNTINQIYRS-SKGQMWLATG--EGLVCFPSARNF-DY-----QVFQRK-EGLPNTH 584 (781)
T ss_dssp ----------CEEEEECTTTTCSCSCEEEEEEC-TTSCEEEEET--TEEEEESCTTTC-CC-----EEECGG-GTCSCCC
T ss_pred ----------CeEEEccCCCCCCCCeeEEEEEC-CCCCEEEEEC--CCceEEECCCCC-cE-----EEcccc-CCCCCce
Confidence 11222221 111 1223467788 8999999875 788 99999873 22 222111 111 12
Q ss_pred ccceEEcCCceEEEEec
Q psy731 442 PSDIRVDRTGVLWVLSN 458 (494)
Q Consensus 442 pd~~~id~~g~Lwvlsn 458 (494)
..++..|.+|.||+.++
T Consensus 585 i~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 585 IRAISEDKNGNIWASTN 601 (781)
T ss_dssp CCEEEECSSSCEEEECS
T ss_pred EEEEEECCCCCEEEEcC
Confidence 34778899999999985
No 116
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.50 E-value=0.052 Score=58.72 Aligned_cols=235 Identities=10% Similarity=0.103 Sum_probs=124.9
Q ss_pred CCEEEEEECCCCcEEEEEEcCCCccc----cccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCc
Q psy731 155 PPSVQVYDLRQQMQIRFFQLKEKTDY----TEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNY 230 (494)
Q Consensus 155 ~Pklv~~dl~t~~vi~~~~lp~~~~~----~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~ 230 (494)
++.+.++|..|.++++++........ .+.+.+..++.- ..+...|++-...+.|.++|..+.+.-++.
T Consensus 265 ~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s-----~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~--- 336 (567)
T 1qks_A 265 PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS-----HYRPEFIVNVKETGKILLVDYTDLNNLKTT--- 336 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC-----SSSSEEEEEETTTTEEEEEETTCSSEEEEE---
T ss_pred CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc-----CCCCEEEEEecCCCeEEEEecCCCccceee---
Confidence 35788889999999888876431000 111222222221 123344455555556666666555433331
Q ss_pred cccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecC-Cc
Q psy731 231 LHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHN-YL 309 (494)
Q Consensus 231 ~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~-~~ 309 (494)
......++.++.+| ++..|+|+++...+.|.|+|.++++.-....- .-
T Consensus 337 --------------------------~i~~~~~~~d~~~~-----pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~ 385 (567)
T 1qks_A 337 --------------------------EISAERFLHDGGLD-----GSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ 385 (567)
T ss_dssp --------------------------EEECCSSEEEEEEC-----TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred --------------------------eeeccccccCceEC-----CCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCc
Confidence 11122345556665 46789999999999999999999874322221 22
Q ss_pred ccCCCCcceEEcCEEeeeecceeeee-eccCCCCCceeEEEee-CCCcceEeeechhhcCCCcCccccccceEEecccCC
Q psy731 310 HFDPLFGDFTIGGVNFQWQTGIHGMS-LSPLTRDNFRVMYFHP-LASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGT 387 (494)
Q Consensus 310 ~~dP~~~~~~v~G~~f~~~~Gi~gIa-Lsp~~~~g~r~LYf~p-lss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~ 387 (494)
.|.|.. | +. ..|+ ++.+|+.+ +.+..+--|.+.--..+. ...+.++.+--.|
T Consensus 386 ~Phpg~--------------g---~~~~~p~----~g~v~~t~~~g~~~Vsvid~~~~~~~~----~~~kvv~~i~~~g- 439 (567)
T 1qks_A 386 TPHPGR--------------G---ANFVHPT----FGPVWATSHMGDDSVALIGTDPEGHPD----NAWKILDSFPALG- 439 (567)
T ss_dssp SBCCTT--------------C---EEEEETT----TEEEEEEEBSSSSEEEEEECCTTTCTT----TBTSEEEEEECSC-
T ss_pred CCCCcc--------------c---eeeECCC----CCcEEEeCCCCCCeEEEecCCCCCCcc----ccCEEEEEEecCC-
Confidence 233321 2 22 3443 35778765 555566666654311111 1112233332112
Q ss_pred CCCCCeEEeeCCCCeEEEecc-C-----CCeEEEEeCCCCccc---cccceeeeeec-----CCeEecccceEEcCCc-e
Q psy731 388 GSQSGASSLDEETGVIFYALL-V-----KSGVGCWNTFRGEEY---NEKSMGLVAED-----NATLIYPSDIRVDRTG-V 452 (494)
Q Consensus 388 ~~qs~g~~~D~~~G~ly~~~~-~-----~~aI~~w~~~~~~~~---~~~~~~~v~~d-----~~~l~~pd~~~id~~g-~ 452 (494)
..+-.+.+.|+.-+||.... + .++|..+|.++. +. . +-++++-.. .+.=..|.++.++++| +
T Consensus 440 -~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~-~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 516 (567)
T 1qks_A 440 -GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM-TGDGSD-PEFKTLPIAEWAGITEGQPRVVQGEFNKDGTE 516 (567)
T ss_dssp -SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC-CCSSSC-CCEEEECHHHHHTCCSSCCEEEEEEECTTSSE
T ss_pred -CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc-cccccC-CCcEEeccccccccCCCCcceEeeeECCCCCE
Confidence 22344677855558888763 3 359999998751 00 1 112333110 0111357788999988 7
Q ss_pred EEEEe
Q psy731 453 LWVLS 457 (494)
Q Consensus 453 Lwvls 457 (494)
|||..
T Consensus 517 ~~~s~ 521 (567)
T 1qks_A 517 VWFSV 521 (567)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99984
No 117
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.47 E-value=0.0083 Score=59.57 Aligned_cols=183 Identities=11% Similarity=0.046 Sum_probs=102.6
Q ss_pred EEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECC-CCcEEE--EEEcCCCccccccCCccceEEEeecCCCCCcEE
Q psy731 128 SVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLR-QQMQIR--FFQLKEKTDYTEESKFSNMVVDVTSANCDNAFL 203 (494)
Q Consensus 128 sV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~-t~~vi~--~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~v 203 (494)
.+..+.++++++ |++.|.|.. .|.+||+. ++++.. .+.+|. ..+....++++- +..++
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~--------~v~~~~~~~~g~~~~~~~~~~~~-----~g~~p~~~~~sp-----dg~~l 207 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTAN--------KLWTHRKLASGEVELVGSVDAPD-----PGDHPRWVAMHP-----TGNYL 207 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTT--------EEEEEEECTTSCEEEEEEEECSS-----TTCCEEEEEECT-----TSSEE
T ss_pred cceEEEECCCCCEEEEEcCCCC--------EEEEEEECCCCCEEEeeeEecCC-----CCCCCCEeEECC-----CCCEE
Confidence 466778888885 777888776 79999998 787643 333332 234556666642 56799
Q ss_pred EEeeCCCCeEEEEEcc--CCceeE-EecCccccCCCCCccccCCccceeeeecccccccccccceeeE-EeeecCCCCCc
Q psy731 204 YIADSGHNHIVVYNYR--TNDSHI-IHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMV-VDVTSANCDDA 279 (494)
Q Consensus 204 YItDs~~~~iIVyd~~--~~~~~r-v~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~-VD~~~~~c~~~ 279 (494)
|+++...+.+.||+++ +|+... +..-..-+.. + .|.. ...+.......++ ++. +..
T Consensus 208 ~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~----~--~g~~---------~~~~~~~~~~~i~~~sp-----dG~ 267 (365)
T 1jof_A 208 YALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG----I--PDRD---------PETGKGLYRADVCALTF-----SGK 267 (365)
T ss_dssp EEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT----C--CCBC---------TTTSSBSEEEEEEEECT-----TSS
T ss_pred EEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC----c--CCcc---------cccccccccccEEEECC-----CCC
Confidence 9999888899998765 565421 1100000000 0 0000 0000000234555 542 457
Q ss_pred EEEEecCCCC-----eEEEEEcC-CCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC
Q psy731 280 FLYIADSGHN-----HIVVYNYR-TNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA 353 (494)
Q Consensus 280 ~~YI~D~~~~-----gliVydl~-~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls 353 (494)
++|+++.+.. .|.||++. +++.-++.... +. ...+..++++||+.-+ +++||..-..
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~--~~--------------~~~~~~~~a~sp~~~d-g~~l~v~~~~ 330 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS--PT--------------PTSGGHSNAVSPCPWS-DEWMAITDDQ 330 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE--EC--------------SSCCTTCCCEEECTTC-TTEEEEECSS
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeee--ec--------------CCCCcccceecCCCcC-CCEEEEEEcC
Confidence 8999987655 79999986 45433221100 00 0123456899983111 3789997654
Q ss_pred Cc--ceEeeechhh
Q psy731 354 ST--TEFAVTTKVL 365 (494)
Q Consensus 354 s~--~ly~V~T~~L 365 (494)
+. .+|.+.++.|
T Consensus 331 ~~~v~v~~~~~~~l 344 (365)
T 1jof_A 331 EGWLEIYRWKDEFL 344 (365)
T ss_dssp SCEEEEEEEETTEE
T ss_pred CCeEEEEEEchhhC
Confidence 32 6787776533
No 118
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.41 E-value=0.0018 Score=70.90 Aligned_cols=121 Identities=17% Similarity=0.137 Sum_probs=76.5
Q ss_pred ceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhc---CCCcCcc-ccccceEEecccCCCCCCCeEEeeCCCCeEEE
Q psy731 330 GIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQ---NRSLDFS-RSNFDFKVMGSRGTGSQSGASSLDEETGVIFY 405 (494)
Q Consensus 330 Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~---~~~~~~~-~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~ 405 (494)
...|+++||| ++++|..-+.+.++..+.++-++ +..+... .....+ .+|. ..-++++| .+|++|.
T Consensus 278 ~PhGv~~sPD----Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~-----gP~h~aF~-~dG~aY~ 346 (595)
T 1fwx_A 278 NPHGCNMAPD----KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGL-----GPLHTAFD-GRGNAYT 346 (595)
T ss_dssp SCCCEEECTT----SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCS-----CEEEEEEC-TTSEEEE
T ss_pred CceEEEEcCC----CCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCC-----CcceEEEC-CCCeEEE
Confidence 3677999998 48999999999988888887553 2233211 111122 1332 24678999 6889999
Q ss_pred eccCCCeEEEEeCCCCc-ccccc-ceeeeeecC-----CeEecccceEEcCCceEEEEecCch
Q psy731 406 ALLVKSGVGCWNTFRGE-EYNEK-SMGLVAEDN-----ATLIYPSDIRVDRTGVLWVLSNKLP 461 (494)
Q Consensus 406 ~~~~~~aI~~w~~~~~~-~~~~~-~~~~v~~d~-----~~l~~pd~~~id~~g~Lwvlsnrl~ 461 (494)
+..-.+.|..||.+++. .|+-+ ...++.+-+ .-+.++-++.+.+||.-.+.+||+.
T Consensus 347 t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 347 SLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFS 409 (595)
T ss_dssp EETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred EEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCC
Confidence 99999999999986511 01000 112332221 1256777888888995445556665
No 119
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.36 E-value=0.03 Score=58.68 Aligned_cols=128 Identities=11% Similarity=0.031 Sum_probs=81.2
Q ss_pred eCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCC-eEEEEeCCCCC
Q psy731 71 WHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCD-RLWALDSGVVE 149 (494)
Q Consensus 71 ~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~-~LwvlD~G~~~ 149 (494)
+..|+||+-..+.... .++..|+.... -.+.-.|- +. .. ++.+++++ +|||-+.+...
T Consensus 83 ~~~~vyV~n~~~~~~~-~~VsVID~~t~---------~vv~~I~v---------G~-~P-gia~SpDgk~lyVan~~~~~ 141 (426)
T 3c75_H 83 DARRVYIQDPAHFAAI-TQQFVIDGSTG---------RILGMTDG---------GF-LP-HPVAAEDGSFFAQASTVFER 141 (426)
T ss_dssp CTTEEEEEECTTTCSS-EEEEEEETTTT---------EEEEEEEE---------CS-SC-EEEECTTSSCEEEEEEEEEE
T ss_pred CCCEEEEECCCcCCCC-CeEEEEECCCC---------EEEEEEEC---------CC-CC-ceEECCCCCEEEEEeccccc
Confidence 4678999998763222 67888876432 12222221 11 23 67788766 59999863110
Q ss_pred -CCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC-CCeEEEEEccCCcee
Q psy731 150 -GKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-HNHIVVYNYRTNDSH 224 (494)
Q Consensus 150 -~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-~~~iIVyd~~~~~~~ 224 (494)
..-...-.|.+||+.|+++++++.++..--.........++++- +..++||++.. .+.|.|+|+++++.-
T Consensus 142 ~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-----DGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 142 IARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP-----DNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT-----TSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred cccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC-----CCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 00001127999999999999999987200000123456777753 78899999975 688999999998763
No 120
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.22 E-value=0.11 Score=51.94 Aligned_cols=87 Identities=13% Similarity=0.124 Sum_probs=60.5
Q ss_pred eEEEcCCC-eEEEEeCCCCCC-CCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC
Q psy731 131 KVQSDPCD-RLWALDSGVVEG-KMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS 208 (494)
Q Consensus 131 ~i~iD~~~-~LwvlD~G~~~~-~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs 208 (494)
.+.+++++ +|||........ .-...-.|.+||+.+.++++++.++.+ ..........++++- +..++|++..
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~-~~~~g~~p~~i~~sp-----dg~~l~v~n~ 127 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK-RVQGLNYDGLFRQTT-----DGKFIVLQNA 127 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT-BCCBCCCGGGEEECT-----TSSEEEEEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc-ccccCCCcceEEECC-----CCCEEEEECC
Confidence 77888776 688887421100 000012689999999999999988752 112234567788853 6789999997
Q ss_pred C-CCeEEEEEccCCce
Q psy731 209 G-HNHIVVYNYRTNDS 223 (494)
Q Consensus 209 ~-~~~iIVyd~~~~~~ 223 (494)
. .+.|-|||+++++.
T Consensus 128 ~~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 128 SPATSIGIVDVAKGDY 143 (361)
T ss_dssp SSSEEEEEEETTTTEE
T ss_pred CCCCeEEEEECCCCcE
Confidence 6 68899999998854
No 121
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.19 E-value=0.086 Score=55.96 Aligned_cols=224 Identities=11% Similarity=0.085 Sum_probs=121.9
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
....+++-+++ |+|--+|..+ -..+..|+.+|.+|++++++++.+.. +..+-=|+.+. .++..+|.|+
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~--g~~~g~v~vlD~~T~~v~~~~~~~~~----~~~~~Yd~~~~-----p~~~~mvsS~ 206 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEE--GEGPGGILMLDHYSFEPLGKWEIDRG----DQYLAYDFWWN-----LPNEVLVSSE 206 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETT--SCSCCEEEEECTTTCCEEEECCSBCT----TCCCCCCEEEE-----TTTTEEEECB
T ss_pred cccceeECCCe-EEEEcCCCcC--CCCCCeEEEEECCCCeEEEEEccCCC----CccccceEEEC-----CCCCEEEEcc
Confidence 44445666667 8876666642 23556899999999999999987651 11111234432 2566889998
Q ss_pred ------------------CCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEE
Q psy731 208 ------------------SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVV 269 (494)
Q Consensus 208 ------------------s~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~V 269 (494)
...+.|.|||+.+++.-.- + .+ -.+++....|++
T Consensus 207 wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t-------------I----------~v-----g~~g~~P~~i~f 258 (462)
T 2ece_A 207 WAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS-------------L----------TL-----GEENRMALELRP 258 (462)
T ss_dssp CCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE-------------E----------ES-----CTTEEEEEEEEE
T ss_pred CcCccccccccchhhhhhccCCEEEEEECCCCcEeeE-------------E----------ec-----CCCCCccceeEe
Confidence 3378999999998632111 0 11 011223344444
Q ss_pred eeecCCCCCcEEEEecC-----CCCeEEEEEcCCCcEEEEecCC-cccCCCCcceEEcCEEeee-ecceeeeeeccCCCC
Q psy731 270 DVTSANCDDAFLYIADS-----GHNHIVVYNYRTNDSHIIHHNY-LHFDPLFGDFTIGGVNFQW-QTGIHGMSLSPLTRD 342 (494)
Q Consensus 270 D~~~~~c~~~~~YI~D~-----~~~gliVydl~~~~swrv~~~~-~~~dP~~~~~~v~G~~f~~-~~Gi~gIaLsp~~~~ 342 (494)
... -+..++|++.. ....|.||.... ..|....-- ....+....+.--.+.|.- ....-+|+|||+
T Consensus 259 ~~~---Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D--- 331 (462)
T 2ece_A 259 LHD---PTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD--- 331 (462)
T ss_dssp CSS---TTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT---
T ss_pred eEC---CCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC---
Confidence 222 25689999988 788899988876 456554310 1111000000000000000 123566999998
Q ss_pred CceeEEEeeCCCc--ceEeeechhhcCCCcCccccccceEEec----------ccCCCCCCCeEEeeCCCCeEEEec
Q psy731 343 NFRVMYFHPLAST--TEFAVTTKVLQNRSLDFSRSNFDFKVMG----------SRGTGSQSGASSLDEETGVIFYAL 407 (494)
Q Consensus 343 g~r~LYf~plss~--~ly~V~T~~L~~~~~~~~~~~~~v~~~G----------~~G~~~qs~g~~~D~~~G~ly~~~ 407 (494)
+|.||.+-.... ..|.|... .+. .+...+..-| .++ .+...++++++....||.+.
T Consensus 332 -GrfLYVSnrg~d~VavfdV~d~----~~~---~lv~~I~tGG~~~~~~~~~G~~~-~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 -DKFLYLSLWGIGEVRQYDISNP----FKP---VLTGKVKLGGIFHRADHPAGHKL-TGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp -SCEEEEEETTTTEEEEEECSST----TSC---EEEEEEECBTTTTCBCCTTSCCC-CSCCCCEEECTTSSEEEEEC
T ss_pred -CCEEEEEeCCCCEEEEEEecCC----CCc---EEEEEEEeCCeeccccccccccC-CCCCCEEEEcCCCCEEEEEc
Confidence 489999766544 44555311 110 1112222111 111 12357899995444899987
No 122
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.18 E-value=0.16 Score=48.88 Aligned_cols=215 Identities=7% Similarity=-0.015 Sum_probs=119.8
Q ss_pred EeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCc--EEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 129 VVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQM--QIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~--vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
|..+...+++++.+.=.... .|..||+.+++ .++++.- ....+..+.+.. +..+++.+
T Consensus 11 i~~~~~s~~~~~l~~~~~d~--------~v~i~~~~~~~~~~~~~~~~-------h~~~v~~~~~~~-----~~~~l~~~ 70 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNH--------EVHIYEKSGNKWVQVHELKE-------HNGQVTGVDWAP-----DSNRIVTC 70 (372)
T ss_dssp CCEEEECTTSSEEEEECSSS--------EEEEEEEETTEEEEEEEEEC-------CSSCEEEEEEET-----TTTEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCC--------EEEEEeCCCCcEEeeeeecC-------CCCcccEEEEeC-----CCCEEEEE
Confidence 45566667777666543332 78889999887 5555542 233455555532 34455554
Q ss_pred eCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 207 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
. ..+.|.+||+.++....... ..........+.+.. +..+++...
T Consensus 71 ~-~dg~i~vwd~~~~~~~~~~~----------------------------~~~~~~~v~~~~~~~-----~~~~l~~~~- 115 (372)
T 1k8k_C 71 G-TDRNAYVWTLKGRTWKPTLV----------------------------ILRINRAARCVRWAP-----NEKKFAVGS- 115 (372)
T ss_dssp E-TTSCEEEEEEETTEEEEEEE----------------------------CCCCSSCEEEEEECT-----TSSEEEEEE-
T ss_pred c-CCCeEEEEECCCCeeeeeEE----------------------------eecCCCceeEEEECC-----CCCEEEEEe-
Confidence 4 45679999998886433310 000111233344432 234555543
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||+.+++.|.+......+. ...+..|+++|+ ++.|+.....+. ++|.+.+..+
T Consensus 116 ~d~~v~i~d~~~~~~~~~~~~~~~~~---------------~~~i~~~~~~~~----~~~l~~~~~dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 116 GSRVISICYFEQENDWWVCKHIKKPI---------------RSTVLSLDWHPN----SVLLAAGSCDFKCRIFSAYIKEV 176 (372)
T ss_dssp TTSSEEEEEEETTTTEEEEEEECTTC---------------CSCEEEEEECTT----SSEEEEEETTSCEEEEECCCTTT
T ss_pred CCCEEEEEEecCCCcceeeeeeeccc---------------CCCeeEEEEcCC----CCEEEEEcCCCCEEEEEcccccc
Confidence 35668899999887655543322211 234778999886 356766665554 6777655444
Q ss_pred cCCCcCc-----cccccceEEe-cccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 366 QNRSLDF-----SRSNFDFKVM-GSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 366 ~~~~~~~-----~~~~~~v~~~-G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
....... ......+..+ +.. .....++++ .+|.++++--....|..||..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELMFESSSSC---GWVHGVCFS-ANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEEEECCCCS---SCEEEEEEC-SSSSEEEEEETTTEEEEEEGGGT
T ss_pred cccccccccccccchhhheEecCCCC---CeEEEEEEC-CCCCEEEEEeCCCEEEEEECCCC
Confidence 3322100 0011222222 222 345677888 57766676678889999999764
No 123
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.18 E-value=0.021 Score=57.89 Aligned_cols=164 Identities=9% Similarity=0.032 Sum_probs=91.3
Q ss_pred ccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCC
Q psy731 262 SKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTR 341 (494)
Q Consensus 262 s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~ 341 (494)
.....|+++. ++.+||+|.. ..|.++| .+++ -.+..-.... .| ..|..|||++|+-.
T Consensus 29 ~~P~~ia~~p------dG~l~V~e~~-g~I~~~d-~~G~-~~~~~~~v~~---------~g-----~~g~~gia~~pdf~ 85 (354)
T 3a9g_A 29 EVPWSIAPLG------GGRYLVTERP-GRLVLIS-PSGK-KLVASFDVAN---------VG-----EAGLLGLALHPEFP 85 (354)
T ss_dssp SCEEEEEEEE------TTEEEEEETT-TEEEEEC-SSCE-EEEEECCCCC---------ST-----TCSEEEEEECTTTT
T ss_pred CCCeEEEEcC------CCeEEEEeCC-CEEEEEe-CCCc-eEeeccceee---------cC-----CCceeeEEeCCCCC
Confidence 4566777774 3458999865 5666665 3333 1221110000 11 24689999998622
Q ss_pred CCceeEEEeeCC---C----cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccC-----
Q psy731 342 DNFRVMYFHPLA---S----TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLV----- 409 (494)
Q Consensus 342 ~g~r~LYf~pls---s----~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~----- 409 (494)
. +++||+.-.. . .+++++..+-- +..+.. ...-+..+. .+......+++++ .+|.||++.-.
T Consensus 86 ~-~g~lyv~~~~~~~~~~~~~~v~r~~~~~~-~~~~~~--~~~l~~~~~-~~~~h~~~~l~~~-pDG~Lyvt~G~~~~~~ 159 (354)
T 3a9g_A 86 K-KSWVYLYASYFAEGGHIRNRVIRGRLDGS-TFKLKE--VKTLIDGIP-GAYIHNGGRIRFG-PDGMLYITTGDAADPR 159 (354)
T ss_dssp T-SCEEEEEEEEECGGGCEEEEEEEEEECSS-SCCEEE--EEEEEEEEE-CCSSCCCCCEEEC-TTSCEEEECCCTTCGG
T ss_pred c-CCEEEEEEeccCCCCCcceEEEEEEECCC-CcCcCc--cEEEEEcCC-CCCCcCCceEEEC-CCCcEEEEECCCCCCc
Confidence 2 2588885432 2 45666643210 001110 000111121 1212345789999 79999998632
Q ss_pred --------CCeEEEEeCCCCcccccc----ceeeeeecCCeEecccceEEcC-CceEEEEecC
Q psy731 410 --------KSGVGCWNTFRGEEYNEK----SMGLVAEDNATLIYPSDIRVDR-TGVLWVLSNK 459 (494)
Q Consensus 410 --------~~aI~~w~~~~~~~~~~~----~~~~v~~d~~~l~~pd~~~id~-~g~Lwvlsnr 459 (494)
...|.+.++++ ..-+. ..++++.. +.-|.+|.+|+ +|.||+..+.
T Consensus 160 ~~~d~~~~~G~I~ri~~dG--~~p~~npf~~~~i~a~G---~rnp~Gla~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 160 LAQDLSSLAGKILRVDEEG--RPPADNPFPNSPIWSYG---HRNPQGIDWHRASGVMVATEHG 217 (354)
T ss_dssp GGTCTTCCSSEEEEECTTS--CCCTTSSSTTCCEEEEC---CSCCCEEEECTTTCCEEEEECC
T ss_pred cccCCCCCCeEEEEEcCCC--CCCCCCCCCCCcEEEEc---cCCcceEEEeCCCCCEEEEecC
Confidence 24799999987 22111 12455443 56799999999 8999999754
No 124
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.05 E-value=0.1 Score=57.28 Aligned_cols=263 Identities=10% Similarity=0.083 Sum_probs=130.7
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+..|..++|||-- .. -|.+||.++++..+ |..+......+...+.++..| .++.++|+=
T Consensus 374 ~v~~i~~d~~g~lWigt---~~-------GL~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~i~~d------~~g~lWigT 436 (758)
T 3ott_A 374 RIRHIYEDKEQQLWIAT---DG-------SINRYDYATRQFIH-YNIVDNTGTYNTNWTYYIFED------TAGQLWIST 436 (758)
T ss_dssp CEEEEEECTTSCEEEEE---TT-------EEEEEETTTTEEEE-EEEECCC--CBSSSEEEEEEC------TTSEEEEEE
T ss_pred ceEEEEECCCCCEEEEe---CC-------cHhhcCcCCCcEEE-eecCCCcCCCCCceEEEEEEc------CCCCEEEEE
Confidence 47889999999999943 21 59999999987654 543321000012223334433 567889863
Q ss_pred CCCCeEEEEEccCCce---eEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 208 SGHNHIVVYNYRTNDS---HIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~---~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
. .++|.+||.++... .++... +.|+.. .-+ .......|..|. ++.++|.
T Consensus 437 ~-~~Gl~~~~~~~~~~~~~~~~~~~------------------~~~~~~--~~l-~~~~i~~i~~d~------~g~lWi~ 488 (758)
T 3ott_A 437 C-LGGIFVVDKHKLMQSTSGQYIAE------------------QNYSVH--NGL-SGMFINQIIPDN------EGNVWVL 488 (758)
T ss_dssp S-SSCEEEEEHHHHHHCCSSEEECS------------------EEECGG--GTC-SCSCEEEEEECT------TSCEEEE
T ss_pred C-CCceEEEccccccccCCcceecc------------------cccccc--ccc-ccceeeeEEEcC------CCCEEEE
Confidence 3 35899999764110 011000 000100 000 112234455552 4568883
Q ss_pred cCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechh
Q psy731 285 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKV 364 (494)
Q Consensus 285 D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~ 364 (494)
.....||..||.++++.-++.+.... . ...+..|..+.+ ..|++..-. -+++...+-
T Consensus 489 ~~t~~Gl~~~d~~~~~~~~~~~~~~~-----~-----------~~~~~~i~~d~~-----g~lWigt~~--Gl~~~~~~~ 545 (758)
T 3ott_A 489 LYNNKGIDKINPRTREVTKLFADELT-----G-----------EKSPNYLLCDED-----GLLWVGFHG--GVMRINPKD 545 (758)
T ss_dssp ETTCSSEEEEETTTTEEEEECTTTSC-----G-----------GGCEEEEEECTT-----SCEEEEETT--EEEEECC--
T ss_pred ccCCCCcEEEeCCCCceEEecCCCcC-----C-----------CcccceEEECCC-----CCEEEEecC--ceEEEecCC
Confidence 33457999999998875554322111 0 012344555432 377876543 355554221
Q ss_pred hcCCCcCccccccceEEecccCC-CCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEeccc
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGT-GSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPS 443 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~-~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd 443 (494)
- . ++.+...|. .....++.- .+|+|+++- .++|.|+|+.++ .+. +..+ .+ . .+..
T Consensus 546 ~---~---------~~~~~~~gl~~~~i~~i~~--~~g~lWi~t--~~Gl~~~~~~~~-~~~--~~~~--~~-~--~~~~ 601 (758)
T 3ott_A 546 E---S---------QQSISFGSFSNNEILSMTC--VKNSIWVST--TNGLWIIDRKTM-DAR--QQNM--TN-K--RFTS 601 (758)
T ss_dssp C---C---------CCBCCCCC---CCEEEEEE--ETTEEEEEE--SSCEEEEETTTC-CEE--EC----CC-C--CCSE
T ss_pred C---c---------eEEecccCCCccceEEEEE--CCCCEEEEC--CCCeEEEcCCCc-eeE--EecC--CC-C--ceee
Confidence 1 0 000100111 112234443 479999987 678999999873 221 1111 11 1 2333
Q ss_pred ceEEcCCceEEEEec-CchhhhcCCC--CCCcccEEEEEEec
Q psy731 444 DIRVDRTGVLWVLSN-KLPVFLYSKL--KPEDINVRIFKSTV 482 (494)
Q Consensus 444 ~~~id~~g~Lwvlsn-rl~~~~~~~~--~~~~~nfrI~r~~~ 482 (494)
.+..+.+|.||+-++ .+-.|.-..+ +...++..|-.+.+
T Consensus 602 ~~~~~~~G~l~fG~~~Gl~~f~p~~~~~~~~~~~v~it~~~v 643 (758)
T 3ott_A 602 LLFDPKEDCVYLGGADGFGISHSNLEATYQPERPILLTALYI 643 (758)
T ss_dssp EEEETTTTEEEEECBSEEEEEEC---CCCCCCCCCEEEEEEE
T ss_pred eEEECCCCcEEEecCCceEEEChhhcccccCCCCEEEEEEEE
Confidence 444467999999863 3433322221 23344555555544
No 125
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.05 E-value=0.012 Score=62.04 Aligned_cols=171 Identities=14% Similarity=0.098 Sum_probs=94.5
Q ss_pred ccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEec-CCcccCCCCcceEEcCEEeeeecceeeeeeccCC
Q psy731 262 SKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHH-NYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLT 340 (494)
Q Consensus 262 s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~-~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~ 340 (494)
.....|+++. ++-+||++..+..|.+++..+++.-.+.. ......| ....|++|||++|+-
T Consensus 27 ~~P~~~a~~p------dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~------------~g~~Gllgia~~Pdf 88 (454)
T 1cru_A 27 NKPHALLWGP------DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDA------------DGQNGLLGFAFHPDF 88 (454)
T ss_dssp SSEEEEEECT------TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCT------------TSSCSEEEEEECTTT
T ss_pred CCceEEEEcC------CCcEEEEEcCCCEEEEEECCCCcEeEEecCCcccccc------------CCCCceeEEEECCCc
Confidence 3455666663 35588888666567777765555433321 1000000 023688999999963
Q ss_pred CCCceeEEEeeCC------------CcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEecc
Q psy731 341 RDNFRVMYFHPLA------------STTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALL 408 (494)
Q Consensus 341 ~~g~r~LYf~pls------------s~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~ 408 (494)
.. +++||+..-. ..++++...+. .+..+.. ...-++.+.. +..-...++++| .+|.||++.-
T Consensus 89 ~~-~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~-~~~~~~~--~~~i~~~~p~-~~~H~~~~l~f~-pDG~Lyv~~G 162 (454)
T 1cru_A 89 KN-NPYIYISGTFKNPKSTDKELPNQTIIRRYTYNK-STDTLEK--PVDLLAGLPS-SKDHQSGRLVIG-PDQKIYYTIG 162 (454)
T ss_dssp TT-SCEEEEEEEEECTTC--CCSCEEEEEEEEEEET-TTTEEEE--EEEEEEEECC-CSSCCEEEEEEC-TTSCEEEEEC
T ss_pred Cc-CCEEEEEEeccccCCCccccccccEEEEEEECC-CCCCcCC--cEEEEEcCCC-CCCCCCCeEeEC-CCCeEEEEEC
Confidence 22 3688885432 23566664321 0111110 0011111221 112346889999 7999999843
Q ss_pred C--------------------------------CCeEEEEeCCCCcc----cccc-ceeeeeecCCeEecccceEEcCCc
Q psy731 409 V--------------------------------KSGVGCWNTFRGEE----YNEK-SMGLVAEDNATLIYPSDIRVDRTG 451 (494)
Q Consensus 409 ~--------------------------------~~aI~~w~~~~~~~----~~~~-~~~~v~~d~~~l~~pd~~~id~~g 451 (494)
. ..+|.+.|+++..| |... ..++.+.. +.-|.++.+|++|
T Consensus 163 d~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G---~RNp~gla~dp~G 239 (454)
T 1cru_A 163 DQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG---HRNPQGLAFTPNG 239 (454)
T ss_dssp CTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC---CSEEEEEEECTTS
T ss_pred CCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEEC---CCCcceEEECCCC
Confidence 2 35799999987311 1000 12344432 4568999999999
Q ss_pred eEEEEecC
Q psy731 452 VLWVLSNK 459 (494)
Q Consensus 452 ~Lwvlsnr 459 (494)
.||+..+.
T Consensus 240 ~L~~~d~g 247 (454)
T 1cru_A 240 KLLQSEQG 247 (454)
T ss_dssp CEEEEEEC
T ss_pred CEEEEecC
Confidence 99999753
No 126
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.05 E-value=0.023 Score=57.22 Aligned_cols=162 Identities=10% Similarity=0.061 Sum_probs=91.6
Q ss_pred ccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCC
Q psy731 262 SKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTR 341 (494)
Q Consensus 262 s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~ 341 (494)
.....|+++. ++.+|++|.. ..|.+++ +++.-.+..-.... .| ..|..|||++|+-.
T Consensus 31 ~~P~~ia~~p------dG~l~V~e~~-g~I~~i~--~g~~~~~~~~~v~~---------~g-----~~~p~gia~~pdf~ 87 (352)
T 2ism_A 31 EVPWALAFLP------DGGMLIAERP-GRIRLFR--EGRLSTYAELSVYH---------RG-----ESGLLGLALHPRFP 87 (352)
T ss_dssp SCEEEEEECT------TSCEEEEETT-TEEEEEE--TTEEEEEEECCCCC---------ST-----TCSEEEEEECTTTT
T ss_pred CCceEEEEcC------CCeEEEEeCC-CeEEEEE--CCCccEeecceEee---------cC-----CCCceeEEECCCCC
Confidence 4456777763 3448999865 5677777 33322221111000 11 24688999998622
Q ss_pred CCceeEEEeeCCC-----cceEeeechhhcCCCcCccccccceEEecc-cCCCCCCCeEEeeCCCCeEEEeccC------
Q psy731 342 DNFRVMYFHPLAS-----TTEFAVTTKVLQNRSLDFSRSNFDFKVMGS-RGTGSQSGASSLDEETGVIFYALLV------ 409 (494)
Q Consensus 342 ~g~r~LYf~plss-----~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~-~G~~~qs~g~~~D~~~G~ly~~~~~------ 409 (494)
+ +++||+.--.. .+++++..+ +..+.. ...-++.+.. .+......++++| .+|.||++.-.
T Consensus 88 ~-~g~lYv~~~~~~~~~~~~v~r~~~~---~~~~~~--~~~l~~~~p~~~~~~h~~~~l~~~-pdG~Lyv~~G~~~~~~~ 160 (352)
T 2ism_A 88 Q-EPYVYAYRTVAEGGLRNQVVRLRHL---GERGVL--DRVVLDGIPARPHGLHSGGRIAFG-PDGMLYVTTGEVYEREL 160 (352)
T ss_dssp T-SCEEEEEEEECTTSSEEEEEEEEEC---SSCEEE--EEEEEEEECCCTTCCCCCCCEEEC-TTSCEEEECCCTTCGGG
T ss_pred C-CCEEEEEEecCCCCCccEEEEEEeC---CCCcCc--eEEEEEeCCCCCCCCcCCceEEEC-CCCCEEEEECCCCCCcc
Confidence 2 26888854322 466666543 111111 0011111221 1212345789999 79999998632
Q ss_pred -------CCeEEEEeCCCCcccccc---------ceeeeeecCCeEecccceEEcC-CceEEEEec
Q psy731 410 -------KSGVGCWNTFRGEEYNEK---------SMGLVAEDNATLIYPSDIRVDR-TGVLWVLSN 458 (494)
Q Consensus 410 -------~~aI~~w~~~~~~~~~~~---------~~~~v~~d~~~l~~pd~~~id~-~g~Lwvlsn 458 (494)
...|.++++++ ..-+. ..++++.. +..|.++.+|+ +|.||+..+
T Consensus 161 ~~d~~~~~g~I~ri~~dG--~~p~~npf~~~~~~~~~i~a~G---~rnp~g~a~d~~~g~l~v~d~ 221 (352)
T 2ism_A 161 AQDLASLGGKILRLTPEG--EPAPGNPFLGRRGARPEVYSLG---HRNPQGLAWHPKTGELFSSEH 221 (352)
T ss_dssp GGCTTCSSSEEEEECTTS--SBCTTCTTTTCTTSCTTEEEEC---CSEECCCEECTTTCCEEEEEE
T ss_pred ccCCCCCceEEEEEcCCC--CCCCCCcccCCCCCCccEEEEc---CCCcccEEEECCCCCEEEEEc
Confidence 25899999987 22111 22344433 56799999999 889999964
No 127
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.05 E-value=0.22 Score=46.88 Aligned_cols=223 Identities=11% Similarity=0.084 Sum_probs=120.0
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+.=.... +|..||+.+++......+.. ....+..+.+. .++.+++.+.
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~--------~i~~~d~~~~~~~~~~~~~~-----~~~~i~~~~~~-----~~~~~l~~~~ 160 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEAS--------TLSIWDLAAPTPRIKAELTS-----SAPACYALAIS-----PDSKVCFSCC 160 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSS--------EEEEEECCCC--EEEEEEEC-----SSSCEEEEEEC-----TTSSEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCC--------cEEEEECCCCCcceeeeccc-----CCCceEEEEEC-----CCCCEEEEEe
Confidence 455666666666554422222 68888998887433333333 22334444442 1345555554
Q ss_pred CCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 208 SGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
..+.|.+||+.+++.-+. .. .......+.+.. +..+++...
T Consensus 161 -~dg~v~~~d~~~~~~~~~~~~-------------------------------~~~~i~~~~~~~-----~~~~l~~~~- 202 (337)
T 1gxr_A 161 -SDGNIAVWDLHNQTLVRQFQG-------------------------------HTDGASCIDISN-----DGTKLWTGG- 202 (337)
T ss_dssp -TTSCEEEEETTTTEEEEEECC-------------------------------CSSCEEEEEECT-----TSSEEEEEE-
T ss_pred -CCCcEEEEeCCCCceeeeeec-------------------------------ccCceEEEEECC-----CCCEEEEEe-
Confidence 346799999998865443 11 011233344432 234444443
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||+++++.-+.. .....+..++++|+ ++.|+.....+. .+|.+.+..
T Consensus 203 ~dg~i~~~d~~~~~~~~~~--------------------~~~~~v~~~~~s~~----~~~l~~~~~~~~i~~~~~~~~~- 257 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQLQQH--------------------DFTSQIFSLGYCPT----GEWLAVGMESSNVEVLHVNKPD- 257 (337)
T ss_dssp TTSEEEEEETTTTEEEEEE--------------------ECSSCEEEEEECTT----SSEEEEEETTSCEEEEETTSSC-
T ss_pred cCCcEEEEECCCCceEeee--------------------cCCCceEEEEECCC----CCEEEEEcCCCcEEEEECCCCC-
Confidence 4567889999887643322 11234677899886 357777665543 444443211
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccce
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDI 445 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~ 445 (494)
..+..+.. .....+++. .+|.++++--....|..||..++.+. ...... ..+..+
T Consensus 258 ------------~~~~~~~~---~~v~~~~~~-~~~~~l~~~~~dg~i~~~~~~~~~~~-----~~~~~~----~~v~~~ 312 (337)
T 1gxr_A 258 ------------KYQLHLHE---SCVLSLKFA-YCGKWFVSTGKDNLLNAWRTPYGASI-----FQSKES----SSVLSC 312 (337)
T ss_dssp ------------EEEECCCS---SCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEE-----EEEECS----SCEEEE
T ss_pred ------------eEEEcCCc---cceeEEEEC-CCCCEEEEecCCCcEEEEECCCCeEE-----EEecCC----CcEEEE
Confidence 11222222 335677888 67777777777889999998874211 111111 234556
Q ss_pred EEcCCceEEEE
Q psy731 446 RVDRTGVLWVL 456 (494)
Q Consensus 446 ~id~~g~Lwvl 456 (494)
.+.++|.+.+.
T Consensus 313 ~~s~~~~~l~~ 323 (337)
T 1gxr_A 313 DISVDDKYIVT 323 (337)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCCEEEE
Confidence 67667654443
No 128
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.95 E-value=0.41 Score=48.47 Aligned_cols=87 Identities=11% Similarity=-0.045 Sum_probs=58.5
Q ss_pred eEEEcCCC-eEEEEeCCCCCC-CCCCCCEEEEEECCCCcEEEEEEcC-CCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 131 KVQSDPCD-RLWALDSGVVEG-KMEQPPSVQVYDLRQQMQIRFFQLK-EKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 131 ~i~iD~~~-~LwvlD~G~~~~-~~~~~Pklv~~dl~t~~vi~~~~lp-~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.+.+.+++ +|||.+...... +....-.|.+||+.|.+++.++.++ ..... .......++++- +..++|++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~-~g~~p~~~~~sp-----DG~~l~v~n 143 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFD-VGPYSWMNANTP-----NNADLLFFQ 143 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccc-cCCCccceEECC-----CCCEEEEEe
Confidence 77777766 699988643210 0011236889999999999999987 21000 012344677753 688999998
Q ss_pred CC-CCeEEEEEccCCcee
Q psy731 208 SG-HNHIVVYNYRTNDSH 224 (494)
Q Consensus 208 s~-~~~iIVyd~~~~~~~ 224 (494)
.. .+.|.|+| ++++.-
T Consensus 144 ~~~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 144 FAAGPAVGLVV-QGGSSD 160 (373)
T ss_pred cCCCCeEEEEE-CCCCEE
Confidence 75 68899999 888753
No 129
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.93 E-value=0.1 Score=53.12 Aligned_cols=220 Identities=12% Similarity=0.099 Sum_probs=119.5
Q ss_pred ccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeeccccccccc
Q psy731 182 EESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEE 261 (494)
Q Consensus 182 ~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~ 261 (494)
++-+...++-|- .++..|++|...+.|.+||..++....+. + ++ .+-.| .+.
T Consensus 11 ~~~yPE~~~wd~-----~~g~~~vs~l~~g~V~~~~~~~~~~~~~~---~-~~-----~s~~g--------------~~~ 62 (334)
T 2p9w_A 11 KNLTPEDTIYDR-----TRQVFYQSNLYKGRIEVYNPKTQSHFNVV---I-DG-----ASSNG--------------DGE 62 (334)
T ss_dssp TTCCCSCEEEET-----TTTEEEEEETTTTEEEEECTTTCCEEEEC---C-TT-----TCCSS--------------CCS
T ss_pred cccCCcCccCcC-----CCCEEEEEeccCCEEEEEcCCCCeEEEEe---c-CC-----ccccC--------------CCc
Confidence 566777888874 57899999999999999999888766661 0 00 00000 111
Q ss_pred ccceeeEEeeecCCCCCcEEEE-ecC------------CCCeEEEEEcC----CCcEEEEecCCcccCCCCcceEEcCEE
Q psy731 262 SKFSNMVVDVTSANCDDAFLYI-ADS------------GHNHIVVYNYR----TNDSHIIHHNYLHFDPLFGDFTIGGVN 324 (494)
Q Consensus 262 s~~~~i~VD~~~~~c~~~~~YI-~D~------------~~~gliVydl~----~~~swrv~~~~~~~dP~~~~~~v~G~~ 324 (494)
.....|.++.- +.+ +.+++ .|. +...|++||+. ....|.+.-...... .-...|+.
T Consensus 63 ~~~sGl~~~~~--D~~-grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~----~~~~~g~~ 135 (334)
T 2p9w_A 63 QQMSGLSLLTH--DNS-KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDE----FEKKAGKR 135 (334)
T ss_dssp EEEEEEEESSS--SSC-CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHH----HHHHHSSC
T ss_pred ceeeEEEEecc--CCC-CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccc----cccccccc
Confidence 12356667310 012 33344 553 35789999999 555666642211000 00000111
Q ss_pred eeeecceeeeeeccCCCCCceeEEE-eeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeE
Q psy731 325 FQWQTGIHGMSLSPLTRDNFRVMYF-HPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVI 403 (494)
Q Consensus 325 f~~~~Gi~gIaLsp~~~~g~r~LYf-~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~l 403 (494)
..+.+.||+.++ ...|. .......+++|...=.. ... ...+...-..+ .-..|++++|....|
T Consensus 136 ---~~~~nDvavD~~-----GnaYVt~s~~~~~I~rV~pdG~~---~~~--~~~~~~~~~~~---~G~nGIv~~pdg~~L 199 (334)
T 2p9w_A 136 ---PFGVVQSAQDRD-----GNSYVAFALGMPAIARVSADGKT---VST--FAWESGNGGQR---PGYSGITFDPHSNKL 199 (334)
T ss_dssp ---CEEEEEEEECTT-----SCEEEEEEESSCEEEEECTTSCC---EEE--EEECCCCSSSC---CSCSEEEEETTTTEE
T ss_pred ---ccCCceeEECCC-----CCEEEeCCCCCCeEEEEeCCCCE---Eee--eeecCCCcccc---cCcceEEEeCCCCEE
Confidence 124778999875 38888 45441478888653110 000 00000000011 114699999534466
Q ss_pred EEeccCCCeEEEEeCCCCccccccceeeeee--c-CCeEecccce-EEcCCceEEEEec
Q psy731 404 FYALLVKSGVGCWNTFRGEEYNEKSMGLVAE--D-NATLIYPSDI-RVDRTGVLWVLSN 458 (494)
Q Consensus 404 y~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~--d-~~~l~~pd~~-~id~~g~Lwvlsn 458 (494)
+..+. ...+.++|.++ +.. ..+=.+ . ...+..|++| .+..+|.+.++++
T Consensus 200 iv~~~-~g~L~~fD~~~--pv~---~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 200 IAFGG-PRALTAFDVSK--PYA---WPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEESS-SSSEEEEECSS--SSC---CCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred EEEcC-CCeEEEEcCCC--Ccc---eeecccccCCcccccCcccccccccCCEEEEEEc
Confidence 66666 99999999886 431 011111 1 1357789996 5667888744443
No 130
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.92 E-value=0.21 Score=50.25 Aligned_cols=293 Identities=13% Similarity=0.142 Sum_probs=144.5
Q ss_pred eeeeeee-eCCc-EEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcC----C
Q psy731 64 LPVSLDK-WHDR-LFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDP----C 137 (494)
Q Consensus 64 ~p~gv~v-~~gR-lFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~----~ 137 (494)
-|.++++ .+|| +||+-- . ..|..+..+.. ..+++-+.. ...+.+.-...+|.+++ .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~---~---G~i~~~~~~g~----------~~~~~~~~~--~v~~~g~~g~~gia~~pdf~~~ 80 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLR---G---GELRHWQAGKG----------LSAPLSGVP--DVWAHGQGGLLDVVLAPDFAQS 80 (353)
T ss_dssp SEEEEEECSTTCCEEEEET---T---TEEEEEETTTE----------ECCCCBSCC--CCCCSTTCSEEEEEECTTHHHH
T ss_pred CcEEEEEcCCCCEEEEEeC---C---ceEEEEeCCCc----------eeeEecCCc--ccccCCCCCceeEEECCCCCCC
Confidence 4788888 5889 999863 2 35666653211 112222110 00122333457889987 6
Q ss_pred CeEEEEeCCCCCCCCCCCCEEEEEECCCC--cEE--EEE--EcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC--
Q psy731 138 DRLWALDSGVVEGKMEQPPSVQVYDLRQQ--MQI--RFF--QLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-- 209 (494)
Q Consensus 138 ~~LwvlD~G~~~~~~~~~Pklv~~dl~t~--~vi--~~~--~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-- 209 (494)
++|||.++...... ...-+|.+|++..+ ++- +.+ .+|. .......-..++++ .++++|||.-.
T Consensus 81 g~lYv~~~~~~~~g-~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~--~~~~~h~~~~l~~~------pdG~Lyv~~Gd~~ 151 (353)
T 2g8s_A 81 RRIWLSYSEVGDDG-KAGTAVGYGRLSDDLSKVTDFRTVFRQMPK--LSTGNHFGGRLVFD------GKGYLFIALGENN 151 (353)
T ss_dssp CEEEEEEEEECSSS-CEEEEEEEEEECTTSSBEEEEEEEEECSSC--CBSSSCCCCCEEEC------SSSEEEEEECCTT
T ss_pred CEEEEEEeCCCCCC-CceeEEEEEEECCCCCCCCceEEEEEECCC--CCCCcccCccEEEC------CCCcEEEEECCCC
Confidence 89999987532100 01237888887654 222 111 2332 11234456788886 36799999522
Q ss_pred -----------CCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCC
Q psy731 210 -----------HNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCD 277 (494)
Q Consensus 210 -----------~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~ 277 (494)
.++|+.+|.+. + + ..++|...+ |...|+|... ......+++|. .
T Consensus 152 ~~~~~q~~~~~~g~I~ri~~dG-~---~p~~npf~~~~--------~~~~~i~a~G-------~rnp~gl~~d~-----~ 207 (353)
T 2g8s_A 152 QRPTAQDLDKLQGKLVRLTDQG-E---IPDDNPFIKES--------GVRAEIWSYG-------IRNPQGMAMNP-----W 207 (353)
T ss_dssp CGGGGGCTTSCTTEEEEEETTS-C---CCTTCTTTTST--------TSCTTEEEEC-------CSEEEEEEEET-----T
T ss_pred CCCccCCCCCCCeEEEEECCCC-C---CCCCCCCcCCC--------CCCccEEEEc-------CcCccceEEEC-----C
Confidence 34677777542 1 2 233332211 1112222211 12245677774 2
Q ss_pred CcEEEEecCCCCe---EEEEEcCCCcEEEEecCCcccCCC---------CcceEEcCEEeeeecceeeeeeccCCC--CC
Q psy731 278 DAFLYIADSGHNH---IVVYNYRTNDSHIIHHNYLHFDPL---------FGDFTIGGVNFQWQTGIHGMSLSPLTR--DN 343 (494)
Q Consensus 278 ~~~~YI~D~~~~g---liVydl~~~~swrv~~~~~~~dP~---------~~~~~v~G~~f~~~~Gi~gIaLsp~~~--~g 343 (494)
.+.+|++|.+..+ |-+..-..+--|..-+....+++. ...+..--..+.......||++..... .-
T Consensus 208 ~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~ 287 (353)
T 2g8s_A 208 SNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQW 287 (353)
T ss_dssp TTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGG
T ss_pred CCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCccc
Confidence 4678999987532 222111112222221100000000 000000000111123567788853210 00
Q ss_pred ceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEe-ccCCCeEEEEeC
Q psy731 344 FRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYA-LLVKSGVGCWNT 418 (494)
Q Consensus 344 ~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~-~~~~~aI~~w~~ 418 (494)
...||+.-+.+.+++++..+ +... ....+.+... .....++++| .+|.||++ +-....|++..+
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~---~~~~-----~~~~~~~~~~--~~rp~~v~~~-pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVN---GDKV-----TEDGRILTDR--GQRIRDVRTG-PDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEE---TTEE-----EEEEEESGGG--CCCEEEEEEC-TTSCEEEEECSTTEEEEEEEC
T ss_pred CCcEEEEEccCCEEEEEEeC---CCeE-----eeeEEcccCC--CCceeEEEEC-CCCcEEEEEeCCCCEEEEEeC
Confidence 23899999999999999765 2111 0111222222 1346789999 79999996 556777877654
No 131
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.84 E-value=0.47 Score=51.01 Aligned_cols=73 Identities=7% Similarity=0.058 Sum_probs=51.6
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC-----CC
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-----HN 211 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-----~~ 211 (494)
.++|++.... . .|+++|++|++++-++.++.. .........++|+ ++.||+...+ .+
T Consensus 115 ~~~v~v~~~d-g--------~l~alD~~tG~~~W~~~~~~~--~~~~~~~~~P~v~-------~g~v~vg~~~~~~~~~g 176 (571)
T 2ad6_A 115 AGQIVKKQAN-G--------HLLALDAKTGKINWEVEVCDP--KVGSTLTQAPFVA-------KDTVLMGCSGAELGVRG 176 (571)
T ss_dssp TTEEEEECTT-S--------EEEEEETTTCCEEEEEECCCG--GGTCBCCSCCEEE-------TTEEEEECBCGGGTCCC
T ss_pred CCEEEEEeCC-C--------EEEEEECCCCCEEEEecCCCC--CccceeccCCEEE-------CCEEEEEecCCccCCCC
Confidence 5688876432 2 799999999999988887651 1111333455553 4678998765 67
Q ss_pred eEEEEEccCCc-eeEEe
Q psy731 212 HIVVYNYRTND-SHIIH 227 (494)
Q Consensus 212 ~iIVyd~~~~~-~~rv~ 227 (494)
.|..||.++|+ .|++.
T Consensus 177 ~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 177 AVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCcEEEEEc
Confidence 89999999877 68884
No 132
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.82 E-value=0.071 Score=55.25 Aligned_cols=209 Identities=12% Similarity=0.112 Sum_probs=116.6
Q ss_pred EeeEEEcCCC-eEEEEeCC-CCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 129 VVKVQSDPCD-RLWALDSG-VVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 129 V~~i~iD~~~-~LwvlD~G-~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
...+.+++++ +|||...+ .. .|.++|+.++++++++.+|.. ..+.. .....|++
T Consensus 139 P~~~a~spDGk~lyVan~~~~~--------~VsVID~~t~~vv~tI~v~g~----------~~~~P------~g~~~~~~ 194 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAP--------AVGVVDLEGKAFKRMLDVPDC----------YHIFP------TAPDTFFM 194 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSC--------EEEEEETTTTEEEEEEECCSE----------EEEEE------EETTEEEE
T ss_pred CceEEEcCCCCEEEEEEcCCCC--------eEEEEECCCCcEEEEEECCCc----------ceeec------CCCceeEE
Confidence 3446677666 58888754 33 799999999999999988761 01111 12234446
Q ss_pred eCCCCeEEEEEccC-CceeEEec-CccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe
Q psy731 207 DSGHNHIVVYNYRT-NDSHIIHH-NYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 207 Ds~~~~iIVyd~~~-~~~~rv~~-~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
-+..+.++++++.+ ++. .... +.+ ||. ....+.+...+. -+..++|++
T Consensus 195 ~~~DG~~~~v~~~~~g~v-~~~~~~~~--~~~-----------------------~~~~~~~~~~~~----~dG~~~~vs 244 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTP-EITHTEVF--HPE-----------------------DEFLINHPAYSQ----KAGRLVWPT 244 (386)
T ss_dssp EETTSCEEEEECCSSSCC-EEEECCCC--SCT-----------------------TSCBCSCCEEET----TTTEEEEEB
T ss_pred ECCCCCEEEEECCCCCeE-EEeeccee--ccc-----------------------cccccccceeEc----CCCcEEEEe
Confidence 66777888888876 554 1111 111 110 011122233331 134577888
Q ss_pred cCCCCeEEEEEcCCCcEEEEecCC--cccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeC---------C
Q psy731 285 DSGHNHIVVYNYRTNDSHIIHHNY--LHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPL---------A 353 (494)
Q Consensus 285 D~~~~gliVydl~~~~swrv~~~~--~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pl---------s 353 (494)
+ +..+.|+|+.++..- +.+.. +..... ..|. -+.|.-.++++|+ .+.||..-- .
T Consensus 245 ~--~g~V~v~d~~~~~~~-v~~~~~~~~~~~~-----~~g~---~p~g~q~~a~~~~----~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 245 Y--TGKIHQIDLSSGDAK-FLPAVEALTEAER-----ADGW---RPGGWQQVAYHRA----LDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp T--TSEEEEEECTTSSCE-ECCCEESSCHHHH-----HTTE---EECSSSCEEEETT----TTEEEEEEEECCTTCTTSC
T ss_pred C--CCEEEEEECCCCcce-eecceeccccccc-----cccc---cCCCcceeeECCC----CCeEEEEeccccccccCCC
Confidence 7 345888888766532 22211 110000 0011 1345666888876 368888532 1
Q ss_pred CcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCC--eEEEeccCCCeEEEEeCCCC
Q psy731 354 STTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETG--VIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 354 s~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G--~ly~~~~~~~aI~~w~~~~~ 421 (494)
+.+++.|.++-.+ ..+.+. +|.+ ..+++++ .+| .||.+.-..+.|..+|+.++
T Consensus 310 ~~~V~viD~~t~k--------v~~~i~-vg~~-----~~~lavs-~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 310 SRFVVVLDAKTGE--------RLAKFE-MGHE-----IDSINVS-QDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp EEEEEEEETTTCC--------EEEEEE-EEEE-----ECEEEEC-SSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEECCCCe--------EEEEEE-CCCC-----cceEEEC-CCCCeEEEEEcCCCCeEEEEECCCC
Confidence 3456666554331 112222 3433 4689998 565 47777888999999999874
No 133
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.75 E-value=0.15 Score=50.67 Aligned_cols=188 Identities=9% Similarity=0.095 Sum_probs=115.2
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee---CCCCeEEEEEccCCceeEEecCcccc
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD---SGHNHIVVYNYRTNDSHIIHHNYLHF 233 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD---s~~~~iIVyd~~~~~~~rv~~~~~~~ 233 (494)
+|.++++...+..+-...+. ..+.+ .+.++|.+| .+...|.+.++......++.++..
T Consensus 89 ~Iy~i~~dg~~~~~l~~~~~----------~~~s~-------~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-- 149 (302)
T 3s25_A 89 SLCRIKRNGHGSTVLDPDPC----------IYASL-------IGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-- 149 (302)
T ss_dssp EEEEEETTSCCCEEEECSCE----------EEEEE-------ETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--
T ss_pred eEEEEeCCCCcceEeecCCc----------cEEEE-------eCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--
Confidence 68888887775333111111 13334 467999999 677889999998777777743211
Q ss_pred CCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCC
Q psy731 234 DPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDP 313 (494)
Q Consensus 234 dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP 313 (494)
+.++. ....+|.+|.+.+.|.+.++.++...++... +
T Consensus 150 ---------------------------------~~~~~-----~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-----~ 186 (302)
T 3s25_A 150 ---------------------------------FTCNT-----SDRYFYYNNPKNGQLYRYDTASQSEALFYDC-----N 186 (302)
T ss_dssp ---------------------------------CCSEE-----ETTEEEEECTTTCCEEEEETTTTEEEEEECS-----C
T ss_pred ---------------------------------eEeeE-----ECCEEEEEeCCCceEEEEECCCCCEEEEeCC-----C
Confidence 11122 2457788887889999999998887777421 1
Q ss_pred CCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC-cceEeeechhhcCCCcCccccccceEEecccCCCCCCC
Q psy731 314 LFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS-TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSG 392 (494)
Q Consensus 314 ~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss-~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~ 392 (494)
. .++++|+ +++|||.-... .+++++... .+ ..+.+-+. .
T Consensus 187 ----------~--------~~~~~P~----g~~iy~t~~~~~~~I~~~~ld----G~--------~~~~Lt~~------~ 226 (302)
T 3s25_A 187 ----------C--------YKPVVLD----DTNVYYMDVNRDNAIVHVNIN----NP--------NPVVLTEA------N 226 (302)
T ss_dssp ----------E--------EEEEEEE----TTEEEEEEGGGTTEEEEECSS----SC--------CCEECSCS------C
T ss_pred ----------c--------cceeeec----CCEEEEEEcCCCcEEEEEECC----CC--------CeEEEeCC------C
Confidence 0 1235566 36999976543 356666432 11 11222221 1
Q ss_pred eEEeeCCCCeEEEe-ccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEec
Q psy731 393 ASSLDEETGVIFYA-LLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLSN 458 (494)
Q Consensus 393 g~~~D~~~G~ly~~-~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvlsn 458 (494)
...+|+..+.||++ +-....|.+-+.++ .+.++|.++ +- .++.+ .+++||.+..
T Consensus 227 ~~~~~~~g~~Iy~~~~~~~~~i~~~~~DG------~~r~~l~~~-~~----~~i~i-~~d~Iy~td~ 281 (302)
T 3s25_A 227 IEHYNVYGSLIFYQRGGDNPALCVVKNDG------TGFKELAKG-EF----CNINV-TSQYVYFTDF 281 (302)
T ss_dssp EEEEEEETTEEEEEECSSSCEEEEEETTS------CCCEEEEES-CE----EEEEE-CSSEEEEEET
T ss_pred cceEEECCCEEEEEECCCCcEEEEEECCC------CccEEeeCC-cc----ceEEE-eCCEEEEEEC
Confidence 23477667899997 66678999999998 244566654 21 15666 4568998764
No 134
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.72 E-value=0.11 Score=53.11 Aligned_cols=122 Identities=10% Similarity=0.084 Sum_probs=71.8
Q ss_pred ecceeeeeeccCCCCCceeEEE--eeCCCcceEeeechhhc--CCCcCccccccceEEecccCCCCCCCeEEeeCCCCeE
Q psy731 328 QTGIHGMSLSPLTRDNFRVMYF--HPLASTTEFAVTTKVLQ--NRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVI 403 (494)
Q Consensus 328 ~~Gi~gIaLsp~~~~g~r~LYf--~plss~~ly~V~T~~L~--~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~l 403 (494)
..|.+|||++|+-.. +++||+ +.-+..++++..-+-=+ ...+.. ...-++.+. .+..-....++++ .+|.|
T Consensus 79 ~~GllGia~~Pdf~~-~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~--~~~i~~~~p-~~~~H~g~~l~fg-pDG~L 153 (347)
T 3das_A 79 EGGLLGIALSPDYAS-DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGA--PDTVFRGIP-KGVIHNGGRIAFG-PDKML 153 (347)
T ss_dssp TBSEEEEEECTTHHH-HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCC--CEEEEEEEC-CCSSCCCCCEEEC-TTSCE
T ss_pred CCCceeeEecccccc-CCEEEEEEecCCCCEEEEEEeCCCCcccccCCC--cEEEEEcCC-CCCCccCccccCC-CCCCE
Confidence 368999999985211 247776 33445567666432100 011111 001111121 1222345679999 79999
Q ss_pred EEecc-------------CCCeEEEEeCCCCc----cccccceeeeeecCCeEecccceEEcCCceEEEEecC
Q psy731 404 FYALL-------------VKSGVGCWNTFRGE----EYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLSNK 459 (494)
Q Consensus 404 y~~~~-------------~~~aI~~w~~~~~~----~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvlsnr 459 (494)
|++.- ...+|.+.++++.. ||. ..++.+. .+.-|.++.+|++|.||+..|.
T Consensus 154 yvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~--~~~i~a~---G~RNp~Gla~dp~G~L~~~d~g 221 (347)
T 3das_A 154 YAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFP--GSPVYSY---GHRNVQGLAWDDKQRLFASEFG 221 (347)
T ss_dssp EEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSST--TCCEEEB---CCSBCCEEEECTTCCEEEEECC
T ss_pred EEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCC--CCeEEee---CCCCcceEEECCCCCEEEEecC
Confidence 99952 36899999998731 121 1234443 3567999999999999999754
No 135
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.59 E-value=0.49 Score=44.38 Aligned_cols=171 Identities=11% Similarity=0.092 Sum_probs=96.0
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPL 236 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~ 236 (494)
.|..||+++++.++++.-. ...+..+.+.. +..+++.+. ..+.|.+||+.+++..+...
T Consensus 164 ~v~~~d~~~~~~~~~~~~~-------~~~i~~~~~~~-----~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~-------- 222 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGH-------TDGASCIDISN-----DGTKLWTGG-LDNTVRSWDLREGRQLQQHD-------- 222 (337)
T ss_dssp CEEEEETTTTEEEEEECCC-------SSCEEEEEECT-----TSSEEEEEE-TTSEEEEEETTTTEEEEEEE--------
T ss_pred cEEEEeCCCCceeeeeecc-------cCceEEEEECC-----CCCEEEEEe-cCCcEEEEECCCCceEeeec--------
Confidence 5888899998888766432 23344444421 344555443 45789999999887654411
Q ss_pred CCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCc
Q psy731 237 FGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFG 316 (494)
Q Consensus 237 ~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~ 316 (494)
.......+.+.. +..++++.. .+..|.+||+.+++..++..+
T Consensus 223 -----------------------~~~~v~~~~~s~-----~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~--------- 264 (337)
T 1gxr_A 223 -----------------------FTSQIFSLGYCP-----TGEWLAVGM-ESSNVEVLHVNKPDKYQLHLH--------- 264 (337)
T ss_dssp -----------------------CSSCEEEEEECT-----TSSEEEEEE-TTSCEEEEETTSSCEEEECCC---------
T ss_pred -----------------------CCCceEEEEECC-----CCCEEEEEc-CCCcEEEEECCCCCeEEEcCC---------
Confidence 011123333321 234455543 355789999998876544311
Q ss_pred ceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEE
Q psy731 317 DFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASS 395 (494)
Q Consensus 317 ~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~ 395 (494)
...+..++.+|++ +.|+.....+. ++|.+++... +...+.. .....++
T Consensus 265 -----------~~~v~~~~~~~~~----~~l~~~~~dg~i~~~~~~~~~~-------------~~~~~~~---~~v~~~~ 313 (337)
T 1gxr_A 265 -----------ESCVLSLKFAYCG----KWFVSTGKDNLLNAWRTPYGAS-------------IFQSKES---SSVLSCD 313 (337)
T ss_dssp -----------SSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCE-------------EEEEECS---SCEEEEE
T ss_pred -----------ccceeEEEECCCC----CEEEEecCCCcEEEEECCCCeE-------------EEEecCC---CcEEEEE
Confidence 1236778888862 56665554443 4554433111 1112222 2345677
Q ss_pred eeCCCCeEEEeccCCCeEEEEeC
Q psy731 396 LDEETGVIFYALLVKSGVGCWNT 418 (494)
Q Consensus 396 ~D~~~G~ly~~~~~~~aI~~w~~ 418 (494)
+. .+|.++++--....|..|+.
T Consensus 314 ~s-~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 314 IS-VDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EC-TTSCEEEEEETTSCEEEEEE
T ss_pred EC-CCCCEEEEecCCCeEEEEEE
Confidence 87 56766666667778888873
No 136
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.59 E-value=0.76 Score=46.56 Aligned_cols=177 Identities=10% Similarity=0.053 Sum_probs=95.6
Q ss_pred CEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEE-EeeC-CCCeEEEEEccCCceeEEecCcccc
Q psy731 156 PSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLY-IADS-GHNHIVVYNYRTNDSHIIHHNYLHF 233 (494)
Q Consensus 156 Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vY-ItDs-~~~~iIVyd~~~~~~~rv~~~~~~~ 233 (494)
+.|..||+.+++..+....+ .....++.. .+..+++ .+.. +...|.+||+.++...++..+..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~--------~~~~~~~~s-----pdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~-- 267 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP--------RHNGAPAFS-----PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS-- 267 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS--------SCEEEEEEC-----TTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS--
T ss_pred cEEEEEECCCCcEEEeecCC--------CcccCEEEc-----CCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC--
Confidence 58888999888875422222 123333332 2344444 4432 34569999999998877732111
Q ss_pred CCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC-CCCeEEEEEcCCCcEEEEecCCcccC
Q psy731 234 DPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS-GHNHIVVYNYRTNDSHIIHHNYLHFD 312 (494)
Q Consensus 234 dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~-~~~gliVydl~~~~swrv~~~~~~~d 312 (494)
....+... +. ++..+|.++- +...|.++|+.+++..++....
T Consensus 268 -----------------------------~~~~~~~s--pd--g~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~---- 310 (415)
T 2hqs_A 268 -----------------------------NNTEPTWF--PD--SQNLAFTSDQAGRPQVYKVNINGGAPQRITWEG---- 310 (415)
T ss_dssp -----------------------------CEEEEEEC--TT--SSEEEEEECTTSSCEEEEEETTSSCCEECCCSS----
T ss_pred -----------------------------cccceEEC--CC--CCEEEEEECCCCCcEEEEEECCCCCEEEEecCC----
Confidence 11222222 10 2345556642 3457889999888754443211
Q ss_pred CCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC--CcceEeeechhhcCCCcCccccccceEEecccCCCCC
Q psy731 313 PLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA--STTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQ 390 (494)
Q Consensus 313 P~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls--s~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~q 390 (494)
..+..+++||+ ++.|+|.... ...++....+ ... .+.+... ..
T Consensus 311 ----------------~~~~~~~~spd----G~~l~~~~~~~g~~~i~~~d~~---~~~---------~~~l~~~---~~ 355 (415)
T 2hqs_A 311 ----------------SQNQDADVSSD----GKFMVMVSSNGGQQHIAKQDLA---TGG---------VQVLSST---FL 355 (415)
T ss_dssp ----------------SEEEEEEECTT----SSEEEEEEECSSCEEEEEEETT---TCC---------EEECCCS---SS
T ss_pred ----------------CcccCeEECCC----CCEEEEEECcCCceEEEEEECC---CCC---------EEEecCC---CC
Confidence 11446889987 3688886543 1245544332 111 1112111 13
Q ss_pred CCeEEeeCCCC-eEEEeccCCC--eEEEEeCCC
Q psy731 391 SGASSLDEETG-VIFYALLVKS--GVGCWNTFR 420 (494)
Q Consensus 391 s~g~~~D~~~G-~ly~~~~~~~--aI~~w~~~~ 420 (494)
....+.. .+| .|+++.-... .|..||.++
T Consensus 356 ~~~~~~s-pdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 356 DETPSLA-PNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp CEEEEEC-TTSSEEEEEEEETTEEEEEEEETTS
T ss_pred cCCeEEc-CCCCEEEEEEcCCCccEEEEEECCC
Confidence 4566777 455 5666665444 799999887
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.51 E-value=0.47 Score=43.26 Aligned_cols=79 Identities=8% Similarity=-0.034 Sum_probs=46.6
Q ss_pred EeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCC-CcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 129 VVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQ-QMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t-~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
|..+...++++..++.. .. +|.+||+.+ ++..+....+ ....+.++.+. ..++..++...
T Consensus 44 v~~~~~spdg~~l~~~~-~~--------~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~s----pdg~~l~~~~~ 104 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-EG--------LLYRLSLAGDPSPEKVDTGF------ATICNNDHGIS----PDGALYAISDK 104 (297)
T ss_dssp CEEEEECTTSSEEEEEE-TT--------EEEEEESSSCCSCEECCCTT------CCCBCSCCEEC----TTSSEEEEEEC
T ss_pred eEeeEECCCCCEEEEEc-CC--------eEEEEeCCCCCCceEecccc------ccccccceEEC----CCCCEEEEEEe
Confidence 44566777777666642 11 788888888 7765432211 12345556653 22344455552
Q ss_pred C--CCCeEEEEEccCCceeEE
Q psy731 208 S--GHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 208 s--~~~~iIVyd~~~~~~~rv 226 (494)
. +...|.++|+.++...++
T Consensus 105 ~~~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 105 VEFGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp TTTSSCEEEEEETTCCCCEEC
T ss_pred CCCCcceEEEEECCCCceEEe
Confidence 2 456788888888877666
No 138
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.51 E-value=0.3 Score=53.53 Aligned_cols=229 Identities=10% Similarity=0.102 Sum_probs=121.1
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+..|..++|||-- . . .|.+||..+++... +.. .....+..+. + .++.+||+-
T Consensus 64 ~i~~i~~d~~g~lWigT-~-~--------Gl~~yd~~~~~f~~----~~~---~~~~~i~~i~-~------~~g~lWigt 119 (758)
T 3ott_A 64 RIYCGVIIDNTYLYMGT-D-N--------GILVYNYRADRYEQ----PET---DFPTDVRTMA-L------QGDTLWLGA 119 (758)
T ss_dssp CEEEEEEETTTEEEEEE-T-T--------EEEEEETTTTEECC----CSC---CCCSCEEEEE-E------ETTEEEEEE
T ss_pred eEEEEEEcCCCcEEEEe-C-C--------CeEEEeCCCCEEEC----ccc---CCCceEEEEE-e------cCCcEEEEc
Confidence 36677889999999863 1 1 58899999986532 220 0111122221 1 357899985
Q ss_pred CCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 208 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
.. +|..||..+++..++.... ..+ +......|..|. ++.++|.-
T Consensus 120 ~~--Gl~~~~~~~~~~~~~~~~~-------------------------~~l-~~~~i~~i~~d~------~g~lWigt-- 163 (758)
T 3ott_A 120 LN--GLYTYQLQSRKLTSFDTRR-------------------------NGL-PNNTIYSIIRTK------DNQIYVGT-- 163 (758)
T ss_dssp TT--EEEEEETTTCCEEEECHHH-------------------------HCC-SCSCEEEEEECT------TCCEEEEE--
T ss_pred CC--cceeEeCCCCeEEEeccCC-------------------------CCc-CCCeEEEEEEcC------CCCEEEEe--
Confidence 43 8999999988877662100 000 111233445552 46677763
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcC
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQN 367 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~ 367 (494)
..||..||.++++.-++..+... ... ..-|..|..+.. ++.|+...- ..+|....+.
T Consensus 164 ~~Gl~~~~~~~~~~~~~~~~~~~--~~~------------~~~i~~i~~d~~----~~~lWigt~--~Gl~~~~~~~--- 220 (758)
T 3ott_A 164 YNGLCRYIPSNGKFEGIPLPVHS--SQS------------NLFVNSLLEDTT----RQCVWIGTE--GYLFQYFPST--- 220 (758)
T ss_dssp TTEEEEEETTTTEEEEECCCCCT--TCS------------SCCEEEEEEETT----TTEEEEEEE--EEEEEEETTT---
T ss_pred CCCHhhCccCCCceEEecCCCcc--ccc------------cceeEEEEEECC----CCEEEEEEC--CCCeEEcCCC---
Confidence 36999999988765444322100 000 001333444322 134555432 1344443210
Q ss_pred CCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecC---CeEe--cc
Q psy731 368 RSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDN---ATLI--YP 442 (494)
Q Consensus 368 ~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~---~~l~--~p 442 (494)
..+ ..+..+.. .....+..| ++|.|+++. .+++.+++++++ .+ ..+..+. ..|. -.
T Consensus 221 ~~~------~~~~~l~~----~~i~~i~~d-~~g~lWigT--~~Gl~~~~~~~~-~~-----~~~~~~~~~~~~l~~~~i 281 (758)
T 3ott_A 221 GQI------KQTEAFHN----NSIKSLALD-GNGDLLAGT--DNGLYVYHNDTT-PL-----QHIIHDSRNIQSLTNNII 281 (758)
T ss_dssp TEE------EEEEEEEE----EEEEEEEEC-TTCCEEEEE--TTEEEEECCTTS-CC-----EEECCCTTCTTSCSCSCE
T ss_pred CeE------EeccCCCC----CeEEEEEEc-CCCCEEEEe--CCceeEEecCCC-cE-----EEEEcCCCCcCcCCcCeE
Confidence 000 00111111 113457889 899999997 469999998763 22 2222111 1110 12
Q ss_pred cceEEcCCceEEEEec
Q psy731 443 SDIRVDRTGVLWVLSN 458 (494)
Q Consensus 443 d~~~id~~g~Lwvlsn 458 (494)
-.+..|++|.|||-+.
T Consensus 282 ~~i~~D~~g~lWiGT~ 297 (758)
T 3ott_A 282 WNIFADQEHNIWLGTD 297 (758)
T ss_dssp EEEEECTTCCEEEEES
T ss_pred EEEEEcCCCCEEEEeC
Confidence 3566789999999874
No 139
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.50 E-value=0.59 Score=51.39 Aligned_cols=74 Identities=9% Similarity=0.083 Sum_probs=49.7
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcC-CCccccccCCccceEEEeecCCCCCcEEEEeeCC-----C
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLK-EKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-----H 210 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp-~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-----~ 210 (494)
.++|++-... -.|+++|.+|++++-++... .. .........++|. ++.||+.-++ .
T Consensus 121 ~g~v~v~~~d---------g~l~AlDa~TG~~~W~~~~~~~~--~~~~~~~~sP~v~-------~g~v~vg~~~~~~~~~ 182 (689)
T 1yiq_A 121 KGKVYVGVLD---------GRLEAIDAKTGQRAWSVDTRADH--KRSYTITGAPRVV-------NGKVVIGNGGAEFGVR 182 (689)
T ss_dssp TTEEEEECTT---------SEEEEEETTTCCEEEEEECCSCT--TSCCBCCSCCEEE-------TTEEEECCBCTTTCCB
T ss_pred CCEEEEEccC---------CEEEEEECCCCCEeeeecCcCCC--CCCccccCCcEEE-------CCEEEEEeCCCccCCC
Confidence 5678776432 17999999999999888875 20 0111223344552 5678887553 4
Q ss_pred CeEEEEEccCCc-eeEEec
Q psy731 211 NHIVVYNYRTND-SHIIHH 228 (494)
Q Consensus 211 ~~iIVyd~~~~~-~~rv~~ 228 (494)
+.|+.||.++|+ .|++..
T Consensus 183 g~v~a~D~~tG~~~W~~~~ 201 (689)
T 1yiq_A 183 GYVTAYDAETGKEAWRFYT 201 (689)
T ss_dssp CEEEEEETTTCCEEEEEES
T ss_pred CEEEEEECCCCcEEEEecc
Confidence 689999999988 588853
No 140
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.48 E-value=0.13 Score=50.89 Aligned_cols=201 Identities=11% Similarity=0.049 Sum_probs=108.0
Q ss_pred EeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC
Q psy731 129 VVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS 208 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs 208 (494)
|..+...+++++.+.=. .. -.|..||+++++.++.+.-.. +....+.+. ..+...+++-+
T Consensus 142 V~~v~~spdg~~l~sgs-~d-------g~v~iwd~~~~~~~~~~~~h~-------~~v~~v~~s-----~~~~~~~~s~~ 201 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGG-KD-------FSVKVWDLSQKAVLKSYNAHS-------SEVNCVAAC-----PGKDTIFLSCG 201 (357)
T ss_dssp EEEEEECSSSSEEEEEE-TT-------SCEEEEETTTTEEEEEECCCS-------SCEEEEEEC-----TTCSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEe-CC-------CeEEEEECCCCcEEEEEcCCC-------CCEEEEEEc-----cCCCceeeeec
Confidence 45556666665444211 11 157889999999888775322 333444431 13334566666
Q ss_pred CCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCC
Q psy731 209 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGH 288 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~ 288 (494)
..+.|.+||+++++.-+.-. ..........+..... .+.++... ..+
T Consensus 202 ~dg~v~~wd~~~~~~~~~~~----------------------------~~~~~~~v~~v~~sp~----~~~~la~g-~~d 248 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATRID----------------------------FCASDTIPTSVTWHPE----KDDTFACG-DET 248 (357)
T ss_dssp TTSCEEECCTTSSSCBCBCC----------------------------CTTCCSCEEEEEECTT----STTEEEEE-ESS
T ss_pred cCCceEEEECCCCceeeeee----------------------------eccccccccchhhhhc----ccceEEEe-ecc
Confidence 67789999998876533200 0001111223333210 12233332 235
Q ss_pred CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcC
Q psy731 289 NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQN 367 (494)
Q Consensus 289 ~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~ 367 (494)
..|.+||+++++.-+.... ....|..|+.+|++ .+.|.-...-++ ++|.+.+.
T Consensus 249 ~~i~~wd~~~~~~~~~~~~-------------------~~~~v~~l~~sp~~---~~~lasgs~D~~i~iwd~~~~---- 302 (357)
T 4g56_B 249 GNVSLVNIKNPDSAQTSAV-------------------HSQNITGLAYSYHS---SPFLASISEDCTVAVLDADFS---- 302 (357)
T ss_dssp SCEEEEESSCGGGCEEECC-------------------CSSCEEEEEECSSS---SCCEEEEETTSCEEEECTTSC----
T ss_pred cceeEEECCCCcEeEEEec-------------------cceeEEEEEEcCCC---CCEEEEEeCCCEEEEEECCCC----
Confidence 6688999987653222110 01347778998863 344544444332 55543321
Q ss_pred CCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 368 RSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 368 ~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
+.++.+|.+ ....++++.|.+|.++.+--....|..|+...
T Consensus 303 ---------~~~~~~~H~---~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 303 ---------EVFRDLSHR---DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp ---------EEEEECCCS---SCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred ---------cEeEECCCC---CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 223444544 23456788766787777777888999999754
No 141
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.46 E-value=0.72 Score=50.60 Aligned_cols=74 Identities=11% Similarity=0.028 Sum_probs=51.2
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC-----CC
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-----HN 211 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-----~~ 211 (494)
.++|++-... . .|+++|++|++++-++..+.+ ..........++|+ ++.+|+..++ .+
T Consensus 128 ~~~v~v~~~d-g--------~l~alD~~tG~~~W~~~~~~~-~~~~~~~~~~p~v~-------~~~v~v~~~~~~~~~~g 190 (677)
T 1kb0_A 128 KGKVYVGAWD-G--------RLIALDAATGKEVWHQNTFEG-QKGSLTITGAPRVF-------KGKVIIGNGGAEYGVRG 190 (677)
T ss_dssp TTEEEEECTT-S--------EEEEEETTTCCEEEEEETTTT-CCSSCBCCSCCEEE-------TTEEEECCBCTTTCCBC
T ss_pred CCEEEEEcCC-C--------EEEEEECCCCCEEeeecCCcC-cCcCcccccCcEEE-------CCEEEEEecccccCCCC
Confidence 5688876432 2 799999999999998987621 01112233455553 5688998764 57
Q ss_pred eEEEEEccCCc-eeEEe
Q psy731 212 HIVVYNYRTND-SHIIH 227 (494)
Q Consensus 212 ~iIVyd~~~~~-~~rv~ 227 (494)
.|.+||.++|+ .|++.
T Consensus 191 ~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 191 YITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCcEEEEec
Confidence 89999999887 68884
No 142
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.46 E-value=0.72 Score=46.72 Aligned_cols=172 Identities=7% Similarity=0.071 Sum_probs=94.1
Q ss_pred CCCcEEEEeeC-CCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCC
Q psy731 198 CDNAFLYIADS-GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANC 276 (494)
Q Consensus 198 c~~~~vYItDs-~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c 276 (494)
+++..+|.+.. +...|.+||+.+++..++..+.. ....+++. +.
T Consensus 189 dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~-------------------------------~~~~~~~s--pd-- 233 (415)
T 2hqs_A 189 DGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR-------------------------------HNGAPAFS--PD-- 233 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS-------------------------------CEEEEEEC--TT--
T ss_pred CCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC-------------------------------cccCEEEc--CC--
Confidence 35667777755 45689999999998877732110 11222332 10
Q ss_pred CCcEEEEecCC-CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC-C
Q psy731 277 DDAFLYIADSG-HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA-S 354 (494)
Q Consensus 277 ~~~~~YI~D~~-~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls-s 354 (494)
++..+|..... ...|.+||+++++..++.... ..+..++.||+ ++.|+|..-. +
T Consensus 234 g~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~--------------------~~~~~~~~spd----g~~l~~~s~~~g 289 (415)
T 2hqs_A 234 GSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR--------------------SNNTEPTWFPD----SQNLAFTSDQAG 289 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEECCCCS--------------------SCEEEEEECTT----SSEEEEEECTTS
T ss_pred CCEEEEEEecCCCceEEEEECCCCCEEeCcCCC--------------------CcccceEECCC----CCEEEEEECCCC
Confidence 12344454432 356999999988865553221 11456888887 3688886642 2
Q ss_pred -cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccC--CCeEEEEeCCCCccccccceee
Q psy731 355 -TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLV--KSGVGCWNTFRGEEYNEKSMGL 431 (494)
Q Consensus 355 -~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~--~~aI~~w~~~~~~~~~~~~~~~ 431 (494)
.++|.++.+- .. .+.+-..+ ......+++|....|+++... ...|..||.++|+ ...
T Consensus 290 ~~~i~~~d~~~---~~---------~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~------~~~ 349 (415)
T 2hqs_A 290 RPQVYKVNING---GA---------PQRITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG------VQV 349 (415)
T ss_dssp SCEEEEEETTS---SC---------CEECCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC------EEE
T ss_pred CcEEEEEECCC---CC---------EEEEecCC--CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC------EEE
Confidence 2666654321 10 11111111 123356777433356666554 4689999998742 222
Q ss_pred eeecCCeEecccceEEcCCce
Q psy731 432 VAEDNATLIYPSDIRVDRTGV 452 (494)
Q Consensus 432 v~~d~~~l~~pd~~~id~~g~ 452 (494)
+... . ....+.+.++|.
T Consensus 350 l~~~-~---~~~~~~~spdg~ 366 (415)
T 2hqs_A 350 LSST-F---LDETPSLAPNGT 366 (415)
T ss_dssp CCCS-S---SCEEEEECTTSS
T ss_pred ecCC-C---CcCCeEEcCCCC
Confidence 3222 1 455667777775
No 143
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.40 E-value=0.083 Score=54.13 Aligned_cols=128 Identities=9% Similarity=-0.014 Sum_probs=78.2
Q ss_pred eCCcEEEEecCCCCCCCceeEEEEccCCCCCCCCCCCCccccCCCcccccccCCCceEEeeEEEcCCC-eEEEEeCCCCC
Q psy731 71 WHDRLFLAVPRHKNGVPSTLNYVMLPNSNNKNKSITSPILMPYPSWESNVREARNLTSVVKVQSDPCD-RLWALDSGVVE 149 (494)
Q Consensus 71 ~~gRlFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~~sp~l~PYP~~~~n~~~~~~lvsV~~i~iD~~~-~LwvlD~G~~~ 149 (494)
...|+||+-+... .+--++..|+.... -.+.-+|- .. .. ++.++.++ +|||-+.+...
T Consensus 30 ~~~~~yV~~~~~~-~~~d~vsvID~~t~---------~v~~~i~v-------G~---~P-~i~~spDg~~lyVan~~~~r 88 (368)
T 1mda_H 30 ISRRSHITLPAYF-AGTTENWVSCAGCG---------VTLGHSLG-------AF---LS-LAVAGHSGSDFALASTSFAR 88 (368)
T ss_dssp CTTEEEEEECTTT-CSSEEEEEEETTTT---------EEEEEEEE-------CT---TC-EEEECTTSSCEEEEEEEETT
T ss_pred CCCeEEEECCccC-CccceEEEEECCCC---------eEEEEEeC-------CC---CC-ceEECCCCCEEEEEcccccc
Confidence 4689999998863 22227778875432 12332331 11 13 57777665 69999864221
Q ss_pred CC-CCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC-CCeEEE--EEccCCceeE
Q psy731 150 GK-MEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-HNHIVV--YNYRTNDSHI 225 (494)
Q Consensus 150 ~~-~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-~~~iIV--yd~~~~~~~r 225 (494)
.. -...-.|.+||+.|+++++++.+|...-.........++++ .++.++||++.. ...+.| +|.++ ..+
T Consensus 89 ~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~S-----pDGk~lyVan~~~~~~v~V~~iD~~t--v~~ 161 (368)
T 1mda_H 89 SAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC-----ASSACLLFFLFGSSAAAGLSVPGASD--DQL 161 (368)
T ss_dssp TTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEEC-----TTSSCEEEEECSSSCEEEEEETTTEE--EEE
T ss_pred cccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEc-----CCCCEEEEEccCCCCeEEEEEEchhh--ceE
Confidence 00 00112799999999999999998720000001234456664 268899999986 567888 89988 455
Q ss_pred E
Q psy731 226 I 226 (494)
Q Consensus 226 v 226 (494)
+
T Consensus 162 i 162 (368)
T 1mda_H 162 T 162 (368)
T ss_dssp E
T ss_pred E
Confidence 5
No 144
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.23 E-value=1 Score=44.69 Aligned_cols=216 Identities=11% Similarity=0.132 Sum_probs=112.0
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+.=.... .|..||+.+++.++.+.-. ...+..+... .+..++ ++=
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~--------~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~-----p~~~~l-~s~ 183 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDR--------LIRIWDIENRKIVMILQGH-------EQDIYSLDYF-----PSGDKL-VSG 183 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEEEECCC-------SSCEEEEEEC-----TTSSEE-EEE
T ss_pred eEEEEEECCCCCEEEEEcCCC--------eEEEEECCCCcEEEEEccC-------CCCEEEEEEc-----CCCCEE-EEe
Confidence 366777777887766522222 6888999999988765422 2233333332 133344 444
Q ss_pred CCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 208 SGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
+..+.|.+||+.+++.-.. .++ .....+.+.. . +..++.. -.
T Consensus 184 s~d~~v~iwd~~~~~~~~~~~~~--------------------------------~~v~~~~~~~--~--~~~~l~~-~s 226 (393)
T 1erj_A 184 SGDRTVRIWDLRTGQCSLTLSIE--------------------------------DGVTTVAVSP--G--DGKYIAA-GS 226 (393)
T ss_dssp ETTSEEEEEETTTTEEEEEEECS--------------------------------SCEEEEEECS--T--TCCEEEE-EE
T ss_pred cCCCcEEEEECCCCeeEEEEEcC--------------------------------CCcEEEEEEC--C--CCCEEEE-Ec
Confidence 5567899999998875433 110 0122222221 0 1233333 23
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||+++++.-+......... .| -...+..++++|++ +.|+-....++ ++|.+.+...
T Consensus 227 ~d~~v~iwd~~~~~~~~~~~~~~~~~--------~~----h~~~v~~v~~~~~g----~~l~s~s~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 227 LDRAVRVWDSETGFLVERLDSENESG--------TG----HKDSVYSVVFTRDG----QSVVSGSLDRSVKLWNLQNANN 290 (393)
T ss_dssp TTSCEEEEETTTCCEEEEEC--------------CC----CSSCEEEEEECTTS----SEEEEEETTSEEEEEEC-----
T ss_pred CCCcEEEEECCCCcEEEeecccccCC--------CC----CCCCEEEEEECCCC----CEEEEEeCCCEEEEEECCCCCC
Confidence 45678899998876543321110000 00 12347789998863 56666655554 6777654322
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.................|.. .....++.. .+|...++--....|..||..+|
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~-~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHK---DFVLSVATT-QNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp ----------CEEEEEECCS---SCEEEEEEC-GGGCEEEEEETTSEEEEEETTTC
T ss_pred cccccCCCCCcceEEEeccc---CcEEEEEEC-CCCCEEEEEeCCCeEEEEECCCC
Confidence 11110000111123334443 234456777 56766677777888999999875
No 145
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.21 E-value=0.99 Score=43.83 Aligned_cols=61 Identities=10% Similarity=0.044 Sum_probs=34.8
Q ss_pred cCCCeEEEEeCCCCccccccceeeeeecCCeEe--------cccceEEcCCc-eEEEEecCchhhhcCCCCCCcccEEEE
Q psy731 408 LVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLI--------YPSDIRVDRTG-VLWVLSNKLPVFLYSKLKPEDINVRIF 478 (494)
Q Consensus 408 ~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~--------~pd~~~id~~g-~Lwvlsnrl~~~~~~~~~~~~~nfrI~ 478 (494)
-....|..||.++| ....+........ ....+.+.+|| .|++.+++- ....||
T Consensus 317 ~~~~~i~~~d~~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~------------g~~~l~ 378 (388)
T 3pe7_A 317 ENDPFLYVFNMKNG------TQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH------------GKPALY 378 (388)
T ss_dssp CCCCEEEEEETTTT------EEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT------------SSCEEE
T ss_pred CCCCEEEEEeccCC------ceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCC------------CceeEE
Confidence 44668999999874 2233433322111 24556777888 577777541 123577
Q ss_pred EEechhhh
Q psy731 479 KSTVRNAI 486 (494)
Q Consensus 479 r~~~~~~i 486 (494)
++++++-.
T Consensus 379 ~~~l~~~~ 386 (388)
T 3pe7_A 379 LATLPESV 386 (388)
T ss_dssp EEECCGGG
T ss_pred EEECChhc
Confidence 77776543
No 146
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.10 E-value=0.65 Score=45.94 Aligned_cols=180 Identities=8% Similarity=0.112 Sum_probs=96.9
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE-ecCccccCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDP 235 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv-~~~~~~~dp 235 (494)
.|..||+.+++.++++.-. ......+.+. ..+..+++|=+..+.|.+||+++++.-+. ..+
T Consensus 150 ~i~iwd~~~~~~~~~~~~h-------~~~V~~~~~~-----~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~------ 211 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAH-------AAQVTCVAAS-----PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS------ 211 (344)
T ss_dssp CEEEEETTTTEEEEEECCC-------SSCEEEEEEC-----SSCTTEEEEEETTSCEEEEETTSSSCEEECC--------
T ss_pred eEEEEECCCCcEEEEEcCc-------CCceEEEEec-----CCCCCceeeeccccccccccccccceeeeeecc------
Confidence 5888999999998866422 2233334332 23445667767778899999998876443 100
Q ss_pred CCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCC
Q psy731 236 LFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLF 315 (494)
Q Consensus 236 ~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~ 315 (494)
........+.... ++..+.++-..+..|.+||+++++.-+...
T Consensus 212 -----------------------~~~~~~~~~~~~p-----~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~--------- 254 (344)
T 4gqb_B 212 -----------------------APGYLPTSLAWHP-----QQSEVFVFGDENGTVSLVDTKSTSCVLSSA--------- 254 (344)
T ss_dssp -------------------------CCCEEEEEECS-----SCTTEEEEEETTSEEEEEESCC--CCEEEE---------
T ss_pred -----------------------eeeccceeeeecC-----CCCcceEEeccCCcEEEEECCCCcEEEEEc---------
Confidence 0011112222221 122223333345668899998765322110
Q ss_pred cceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeE
Q psy731 316 GDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGAS 394 (494)
Q Consensus 316 ~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~ 394 (494)
| -...|..|+.+|++ .+.|.-...-++ ++|.+.+. +.++..|.. ....++
T Consensus 255 ------~----h~~~v~~v~fsp~g---~~~lasgs~D~~i~vwd~~~~-------------~~~~~~~H~---~~V~~v 305 (344)
T 4gqb_B 255 ------V----HSQCVTGLVFSPHS---VPFLASLSEDCSLAVLDSSLS-------------ELFRSQAHR---DFVRDA 305 (344)
T ss_dssp ------C----CSSCEEEEEECSSS---SCCEEEEETTSCEEEECTTCC-------------EEEEECCCS---SCEEEE
T ss_pred ------C----CCCCEEEEEEccCC---CeEEEEEeCCCeEEEEECCCC-------------cEEEEcCCC---CCEEEE
Confidence 0 02347788998863 344544444332 55543322 123334443 234567
Q ss_pred EeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 395 SLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 395 ~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
++.|....|+.+--....|..|+...
T Consensus 306 ~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 306 TWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 77754456776766788999999876
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.09 E-value=0.7 Score=49.66 Aligned_cols=165 Identities=10% Similarity=0.092 Sum_probs=84.4
Q ss_pred EEeeEEEcCCCeEEEE-eCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCc-----cccc------------cCCccce
Q psy731 128 SVVKVQSDPCDRLWAL-DSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKT-----DYTE------------ESKFSNM 189 (494)
Q Consensus 128 sV~~i~iD~~~~Lwvl-D~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~-----~~~~------------~S~l~d~ 189 (494)
++..+...++|+..++ .. .. .......|..||+.+++..+........ ++.. ...+.++
T Consensus 38 ~~~~~~~SpdG~~la~~~~-~d--~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRG-KD--SDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCEEEEECTTSSEEEEEEC-CS--SCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCceEecCCCEEEEEec-cC--CCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 4556667777754333 32 11 0011236888888888877666543200 0000 0113344
Q ss_pred EEEeecCCCCCcEEEEeeCCCCeEEEEEccCC---ceeEEecCccccCCCCCccccCCccceeeeeccccccccccccee
Q psy731 190 VVDVTSANCDNAFLYIADSGHNHIVVYNYRTN---DSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSN 266 (494)
Q Consensus 190 vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~---~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~ 266 (494)
.+. .+..+++++.. +.|.+||+.++ ...++..+ ......
T Consensus 115 ~~S-----pDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~-------------------------------~~~~~~ 156 (741)
T 2ecf_A 115 QWS-----PDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG-------------------------------EGFATD 156 (741)
T ss_dssp EEC-----TTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS-------------------------------SSCEEE
T ss_pred EEC-----CCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC-------------------------------Cccccc
Confidence 442 24445555443 78999999988 66555211 011222
Q ss_pred eEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeee-----ecceeeeeeccCCC
Q psy731 267 MVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQW-----QTGIHGMSLSPLTR 341 (494)
Q Consensus 267 i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~-----~~Gi~gIaLsp~~~ 341 (494)
+.+. + .++..||..| ..|.++|+.+++..++...... + ..+|.. .| ...+.+++.||+
T Consensus 157 ~~~S--P--DG~~la~~~~---~~i~~~d~~~g~~~~~~~~~~~--~-----~~~g~~-~~v~~~~~~~~~~~~~SpD-- 219 (741)
T 2ecf_A 157 AKLS--P--KGGFVSFIRG---RNLWVIDLASGRQMQLTADGST--T-----IGNGIA-EFVADEEMDRHTGYWWAPD-- 219 (741)
T ss_dssp EEEC--T--TSSEEEEEET---TEEEEEETTTTEEEECCCCCCS--S-----EEESCC-CHHHHHHSCCCCSEEECTT--
T ss_pred ccCC--C--CCCEEEEEeC---CcEEEEecCCCCEEEeccCCcc--c-----eecccc-ceeeeeccccccceEECCC--
Confidence 3332 1 1245677765 4799999999987777543211 0 001100 00 012467999997
Q ss_pred CCceeEEEeeC
Q psy731 342 DNFRVMYFHPL 352 (494)
Q Consensus 342 ~g~r~LYf~pl 352 (494)
+++|+|...
T Consensus 220 --g~~l~~~~~ 228 (741)
T 2ecf_A 220 --DSAIAYARI 228 (741)
T ss_dssp --SSCEEEEEE
T ss_pred --CCEEEEEEE
Confidence 368888644
No 148
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.06 E-value=1.7 Score=47.58 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=50.2
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCC-----CC
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSG-----HN 211 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~-----~~ 211 (494)
.++|++-... . .|+++|.+|++++-++..... .........++|+ ++.+|+..++ .+
T Consensus 117 ~~~v~v~~~d-g--------~l~alD~~tG~~~W~~~~~~~--~~~~~~~~~P~v~-------~~~v~vg~~~~~~~~~g 178 (668)
T 1kv9_A 117 GDKVYVGTLD-G--------RLIALDAKTGKAIWSQQTTDP--AKPYSITGAPRVV-------KGKVIIGNGGAEYGVRG 178 (668)
T ss_dssp BTEEEEECTT-S--------EEEEEETTTCCEEEEEECSCT--TSSCBCCSCCEEE-------TTEEEECCBCTTTCCBC
T ss_pred CCEEEEEcCC-C--------EEEEEECCCCCEeeeeccCCC--CCcceecCCCEEE-------CCEEEEeCCCCCcCCCC
Confidence 5678776422 1 799999999999988887531 1111222345553 4678987654 46
Q ss_pred eEEEEEccCCce-eEEec
Q psy731 212 HIVVYNYRTNDS-HIIHH 228 (494)
Q Consensus 212 ~iIVyd~~~~~~-~rv~~ 228 (494)
.|..||.++|+. |++..
T Consensus 179 ~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 179 FVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp EEEEEETTTCCEEEEEES
T ss_pred EEEEEECCCCcEEEEecc
Confidence 899999998875 88843
No 149
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.83 E-value=1.7 Score=47.65 Aligned_cols=121 Identities=11% Similarity=0.043 Sum_probs=72.6
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccc----cCCccceEEEeecCCCCCcEEEEeeCCCCe
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTE----ESKFSNMVVDVTSANCDNAFLYIADSGHNH 212 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~----~S~l~d~vVD~~~~~c~~~~vYItDs~~~~ 212 (494)
.++|++..... .|+++|+.|++++-+++++......+ ...-..++++ ++.||+.. ..+.
T Consensus 77 ~g~vyv~~~~~---------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-------~~~v~v~~-~dg~ 139 (677)
T 1kb0_A 77 DGIMYVSASWS---------VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-------KGKVYVGA-WDGR 139 (677)
T ss_dssp TTEEEEECGGG---------CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-------TTEEEEEC-TTSE
T ss_pred CCEEEEECCCC---------eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE-------CCEEEEEc-CCCE
Confidence 67788775421 69999999999999898765211100 0011244553 57899984 4578
Q ss_pred EEEEEccCCce-eEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC----
Q psy731 213 IVVYNYRTNDS-HIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG---- 287 (494)
Q Consensus 213 iIVyd~~~~~~-~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~---- 287 (494)
|+++|.++|+. |++.-. .++.. .+ ......+++ +..+|+....
T Consensus 140 l~alD~~tG~~~W~~~~~---~~~~~-~~---------------------~~~~~p~v~-------~~~v~v~~~~~~~~ 187 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTF---EGQKG-SL---------------------TITGAPRVF-------KGKVIIGNGGAEYG 187 (677)
T ss_dssp EEEEETTTCCEEEEEETT---TTCCS-SC---------------------BCCSCCEEE-------TTEEEECCBCTTTC
T ss_pred EEEEECCCCCEEeeecCC---cCcCc-Cc---------------------ccccCcEEE-------CCEEEEEecccccC
Confidence 99999988875 887321 00000 00 001112332 3467776543
Q ss_pred -CCeEEEEEcCCCc-EEEEec
Q psy731 288 -HNHIVVYNYRTND-SHIIHH 306 (494)
Q Consensus 288 -~~gliVydl~~~~-swrv~~ 306 (494)
...|..||.++++ .|++..
T Consensus 188 ~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 188 VRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp CBCEEEEEETTTCCEEEEEES
T ss_pred CCCEEEEEECCCCcEEEEecc
Confidence 4679999998766 788864
No 150
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.66 E-value=3 Score=44.89 Aligned_cols=79 Identities=8% Similarity=-0.007 Sum_probs=50.4
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC-----CCC
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS-----GHN 211 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs-----~~~ 211 (494)
.++|++-.... .|+++|++|++++-++.++.. ...-+....++|.- ....++..||+.-+ ..+
T Consensus 117 ~~~v~~~t~dg---------~l~AlD~~TG~~~W~~~~~~~--~~~~~~~~sP~v~~-~~~~G~~~v~vg~~~~e~~~~g 184 (582)
T 1flg_A 117 GDKVFFGTLDA---------SVVALNKNTGKVVWKKKFADH--GAGYTMTGAPTIVK-DGKTGKVLLIHGSSGDEFGVVG 184 (582)
T ss_dssp TTEEEEEETTT---------EEEEEESSSCCEEEEEECSCG--GGTCBCCSCCEEEE-CTTTCCEEEEECCBCGGGCCBC
T ss_pred CCEEEEEeCCC---------EEEEEECCCCCEEeeecCCCC--CcCcccccCCEEeC-CCcCCcEEEEEeccccccCCCC
Confidence 56788765322 799999999999988887651 11112334555532 11112338898654 357
Q ss_pred eEEEEEccCCc-eeEEe
Q psy731 212 HIVVYNYRTND-SHIIH 227 (494)
Q Consensus 212 ~iIVyd~~~~~-~~rv~ 227 (494)
.|..||.++|+ .|+..
T Consensus 185 ~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 185 RLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EEEEECTTTCCEEEEEE
T ss_pred EEEEEECCCCCEEeecC
Confidence 89999999887 57663
No 151
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.64 E-value=2.2 Score=48.84 Aligned_cols=212 Identities=12% Similarity=0.095 Sum_probs=115.8
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+.=.... .|.+||+.+++.++++.-.. .....+... ...+..+.++=
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~--------~v~vwd~~~~~~~~~~~~~~-------~~v~~~~~~----~~~~~~~l~sg 719 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADK--------KVKIWDSATGKLVHTYDEHS-------EQVNCCHFT----NKSNHLLLATG 719 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEECCS-------SCEEEEEEC----SSSSCCEEEEE
T ss_pred CEEEEEEecCCCEEEEEeCCC--------eEEEEECCCCceEEEEcCCC-------CcEEEEEEe----cCCCceEEEEE
Confidence 456667777776555422222 79999999999998776433 223333331 22345566666
Q ss_pred CCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 208 SGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
+..+.|.+||+.++..... ..| ......+.+.. ++.++... .
T Consensus 720 ~~d~~v~vwd~~~~~~~~~~~~h-------------------------------~~~v~~~~~sp-----~~~~l~s~-s 762 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQKECRNTMFGH-------------------------------TNSVNHCRFSP-----DDELLASC-S 762 (1249)
T ss_dssp ETTSCEEEEETTSSSEEEEECCC-------------------------------SSCEEEEEECS-----STTEEEEE-E
T ss_pred eCCCeEEEEECCCcchhheecCC-------------------------------CCCEEEEEEec-----CCCEEEEE-E
Confidence 6778899999999875443 110 11123333332 22333333 2
Q ss_pred CCCeEEEEEcCCCcEEEEec-CCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHH-NYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~-~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L 365 (494)
.+..|.+||+.+++..+... ......+ .+..-.....+..++++|++ +.+....-..-.+|.+.+...
T Consensus 763 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~s~dg----~~l~~~~~~~v~~~d~~~~~~ 831 (1249)
T 3sfz_A 763 ADGTLRLWDVRSANERKSINVKRFFLSS-------EDPPEDVEVIVKCCSWSADG----DKIIVAAKNKVLLFDIHTSGL 831 (1249)
T ss_dssp SSSEEEEEEGGGTEEEEEEECCCCC---------------CCCCCBCCCCBCTTS----SEEEEEETTEEEEEETTTCCE
T ss_pred CCCeEEEEeCCCCcccceeccccccccc-------CCccccccceEEEEEECCCC----CEEEEEcCCcEEEEEecCCCc
Confidence 45678999999887554432 1111000 00011112346778898863 566665533224443322111
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
. .. ...|. ......+++. .+|.+.++-.....|..||..++
T Consensus 832 ~----------~~-~~~~~---~~~v~~~~~s-p~~~~l~~~~~dg~v~vwd~~~~ 872 (1249)
T 3sfz_A 832 L----------AE-IHTGH---HSTIQYCDFS-PYDHLAVIALSQYCVELWNIDSR 872 (1249)
T ss_dssp E----------EE-EECSS---SSCCCEEEEC-SSTTEEEEECSSSCEEEEETTTT
T ss_pred e----------eE-EcCCC---CCceEEEEEc-CCCCEEEEEeCCCeEEEEEcCCC
Confidence 0 00 01122 2446678888 57777777778889999999874
No 152
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.30 E-value=0.77 Score=45.45 Aligned_cols=137 Identities=13% Similarity=0.258 Sum_probs=85.9
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDD 278 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~ 278 (494)
....+|.||.+.+.|.+.++..+...++... .. .+.+.. .+
T Consensus 155 ~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--------------------------------~~--~~~~~P-----~g 195 (302)
T 3s25_A 155 SDRYFYYNNPKNGQLYRYDTASQSEALFYDC--------------------------------NC--YKPVVL-----DD 195 (302)
T ss_dssp ETTEEEEECTTTCCEEEEETTTTEEEEEECS--------------------------------CE--EEEEEE-----ET
T ss_pred ECCEEEEEeCCCceEEEEECCCCCEEEEeCC--------------------------------Cc--cceeee-----cC
Confidence 4678999999889999999998888777210 00 112221 25
Q ss_pred cEEEEecCC-CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC-Ccc
Q psy731 279 AFLYIADSG-HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA-STT 356 (494)
Q Consensus 279 ~~~YI~D~~-~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls-s~~ 356 (494)
.++|.+|.. ...|.+-++.+....++..... ..++|. +++|||..-+ ...
T Consensus 196 ~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~------------------------~~~~~~----g~~Iy~~~~~~~~~ 247 (302)
T 3s25_A 196 TNVYYMDVNRDNAIVHVNINNPNPVVLTEANI------------------------EHYNVY----GSLIFYQRGGDNPA 247 (302)
T ss_dssp TEEEEEEGGGTTEEEEECSSSCCCEECSCSCE------------------------EEEEEE----TTEEEEEECSSSCE
T ss_pred CEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc------------------------ceEEEC----CCEEEEEECCCCcE
Confidence 678888754 3678888888777655543211 124454 3689997443 346
Q ss_pred eEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 357 EFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 357 ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
+++++. |.+. -+.+-+ + + +.++....+.|||++....+|.+-++++
T Consensus 248 i~~~~~----DG~~--------r~~l~~-~---~--~~~i~i~~d~Iy~td~~~~~i~~~~~dG 293 (302)
T 3s25_A 248 LCVVKN----DGTG--------FKELAK-G---E--FCNINVTSQYVYFTDFVSNKEYCTSTQN 293 (302)
T ss_dssp EEEEET----TSCC--------CEEEEE-S---C--EEEEEECSSEEEEEETTTCCEEEEESSS
T ss_pred EEEEEC----CCCc--------cEEeeC-C---c--cceEEEeCCEEEEEECCCCeEEEEECCC
Confidence 777754 2220 011111 1 1 2244445789999999999999999887
No 153
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.18 E-value=3 Score=41.96 Aligned_cols=155 Identities=10% Similarity=0.103 Sum_probs=84.4
Q ss_pred CCcEEEEeeCCCCeEEEEEcc--CCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCC
Q psy731 199 DNAFLYIADSGHNHIVVYNYR--TNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSAN 275 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~--~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~ 275 (494)
++.+++++=+..+.|.+||+. ++...+. ..+. .......+.+..
T Consensus 113 d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-----------------------------~~~~v~~~~~sp---- 159 (450)
T 2vdu_B 113 DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC-----------------------------FSKRPNAISIAE---- 159 (450)
T ss_dssp TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE-----------------------------CSSCEEEEEECT----
T ss_pred CCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc-----------------------------CCCCceEEEEcC----
Confidence 567776666667889999998 6655444 1100 011233344432
Q ss_pred CCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc
Q psy731 276 CDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST 355 (494)
Q Consensus 276 c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~ 355 (494)
++.+++.++. ...+.+|++.+++..+. +.. .+ .| ....+..|+++|+. ++++.|+.....++
T Consensus 160 -~~~~l~~~~~-~g~v~~~~~~~~~~~~~--------~~~-~~--~~----h~~~v~~~~~sp~~-~~~~~l~s~~~d~~ 221 (450)
T 2vdu_B 160 -DDTTVIIADK-FGDVYSIDINSIPEEKF--------TQE-PI--LG----HVSMLTDVHLIKDS-DGHQFIITSDRDEH 221 (450)
T ss_dssp -TSSEEEEEET-TSEEEEEETTSCCCSSC--------CCC-CS--EE----CSSCEEEEEEEECT-TSCEEEEEEETTSC
T ss_pred -CCCEEEEEeC-CCcEEEEecCCcccccc--------cce-ee--ec----ccCceEEEEEcCCC-CCCcEEEEEcCCCc
Confidence 3456666653 45577888776542210 000 00 00 12457789999861 12367777766654
Q ss_pred -ceEeeechhhcCCCcCccccccceE-EecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 356 -TEFAVTTKVLQNRSLDFSRSNFDFK-VMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 356 -~ly~V~T~~L~~~~~~~~~~~~~v~-~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
++|.+.+..+. .. ..|.. .....+++. +|.++++--....|..||..+|
T Consensus 222 i~vwd~~~~~~~------------~~~~~~h~---~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 222 IKISHYPQCFIV------------DKWLFGHK---HFVSSICCG--KDYLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp EEEEEESCTTCE------------EEECCCCS---SCEEEEEEC--STTEEEEEESSSEEEEEETTTC
T ss_pred EEEEECCCCcee------------eeeecCCC---CceEEEEEC--CCCEEEEEeCCCeEEEEECCCC
Confidence 66766542210 01 11322 234456665 5655666667889999999875
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.17 E-value=1.8 Score=39.28 Aligned_cols=56 Identities=13% Similarity=0.234 Sum_probs=35.0
Q ss_pred CEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccC-CceeEE
Q psy731 156 PSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRT-NDSHII 226 (494)
Q Consensus 156 Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~-~~~~rv 226 (494)
..|..||+.++++.+....+. .+..+++. .+..+++.+. .+.|.+||+.+ +...++
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~--------~v~~~~~s-----pdg~~l~~~~--~~~i~~~d~~~~~~~~~~ 78 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPE--------LFEAPNWS-----PDGKYLLLNS--EGLLYRLSLAGDPSPEKV 78 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESS--------CCEEEEEC-----TTSSEEEEEE--TTEEEEEESSSCCSCEEC
T ss_pred eeEEEEeCCCCceeeeccCCc--------ceEeeEEC-----CCCCEEEEEc--CCeEEEEeCCCCCCceEe
Confidence 477888888887765444322 33444442 1344555543 45899999999 877666
No 155
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.13 E-value=2.8 Score=41.28 Aligned_cols=204 Identities=9% Similarity=0.045 Sum_probs=102.8
Q ss_pred EeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC
Q psy731 129 VVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS 208 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs 208 (494)
|..+....+++|.+- ..+ + .|..||+.+++.+....+.. ......+..+.+. .+..++. |=+
T Consensus 85 v~~~~~s~d~~l~~~---s~d-g-----~v~lWd~~~~~~~~~~~~~~---~~H~~~V~~v~~s-----pdg~~l~-sgs 146 (344)
T 4gqb_B 85 VADLTWVGERGILVA---SDS-G-----AVELWELDENETLIVSKFCK---YEHDDIVSTVSVL-----SSGTQAV-SGS 146 (344)
T ss_dssp EEEEEEETTTEEEEE---ETT-S-----EEEEEEECTTSSCEEEEEEE---ECCSSCEEEEEEC-----TTSSEEE-EEE
T ss_pred EEEEEEeCCCeEEEE---ECC-C-----EEEEEeccCCCceeEeeccc---cCCCCCEEEEEEC-----CCCCEEE-EEe
Confidence 555666566665543 221 1 57888999887554443321 0122334444442 1334443 334
Q ss_pred CCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 209 GHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
..+.|.+||+.+++.-+. ..|. .....+.+.. ++..++++=..
T Consensus 147 ~d~~i~iwd~~~~~~~~~~~~h~-------------------------------~~V~~~~~~~-----~~~~~l~s~s~ 190 (344)
T 4gqb_B 147 KDICIKVWDLAQQVVLSSYRAHA-------------------------------AQVTCVAASP-----HKDSVFLSCSE 190 (344)
T ss_dssp TTSCEEEEETTTTEEEEEECCCS-------------------------------SCEEEEEECS-----SCTTEEEEEET
T ss_pred CCCeEEEEECCCCcEEEEEcCcC-------------------------------CceEEEEecC-----CCCCceeeecc
Confidence 556799999999876554 1110 1122233321 12223444445
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhc
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQ 366 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~ 366 (494)
+..|.+||+++++.-+....... ...+..++.+|++ .+.|......++ ++|.+.+..+
T Consensus 191 D~~v~iwd~~~~~~~~~~~~~~~-----------------~~~~~~~~~~p~~---~~~l~sg~~dg~v~~wd~~~~~~- 249 (344)
T 4gqb_B 191 DNRILLWDTRCPKPASQIGCSAP-----------------GYLPTSLAWHPQQ---SEVFVFGDENGTVSLVDTKSTSC- 249 (344)
T ss_dssp TSCEEEEETTSSSCEEECC---------------------CCCEEEEEECSSC---TTEEEEEETTSEEEEEESCC--C-
T ss_pred ccccccccccccceeeeeeccee-----------------eccceeeeecCCC---CcceEEeccCCcEEEEECCCCcE-
Confidence 67789999988764332211000 0114557777752 234444444443 5555433211
Q ss_pred CCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 367 NRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 367 ~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
..+..|.. .....+++.|....+..+--....|..||..++
T Consensus 250 -----------~~~~~~h~---~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 250 -----------VLSSAVHS---QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp -----------CEEEECCS---SCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred -----------EEEEcCCC---CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 11223333 224567777433355566667788999999874
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.04 E-value=1 Score=48.07 Aligned_cols=24 Identities=4% Similarity=0.177 Sum_probs=18.7
Q ss_pred CcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 200 NAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 200 ~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
+..+|.+| +.|.+||+.+++..++
T Consensus 93 ~~~~~~~~---~~i~~~d~~~~~~~~l 116 (706)
T 2z3z_A 93 GLVVLFTQ---GGLVGFDMLARKVTYL 116 (706)
T ss_dssp TEEEEEET---TEEEEEETTTTEEEEE
T ss_pred CeEEEEEC---CEEEEEECCCCceEEc
Confidence 55556555 7899999999988777
No 157
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.98 E-value=2.8 Score=40.50 Aligned_cols=176 Identities=11% Similarity=0.121 Sum_probs=99.4
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE-ecCccccCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDP 235 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv-~~~~~~~dp 235 (494)
.|..||+.+++.++++.... .....+... .+..+ .++=+..+.|.+||+.+++.-.. ..
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~-------~~~~~~~~s-----pdg~~-l~~g~~dg~v~i~~~~~~~~~~~~~~------- 162 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGP-------VDAWTLAFS-----PDSQY-LATGTHVGKVNIFGVESGKKEYSLDT------- 162 (321)
T ss_dssp EEEEEETTTTEEEEEEECCT-------TCCCCEEEC-----TTSSE-EEEECTTSEEEEEETTTCSEEEEEEC-------
T ss_pred cEEEEECCCCCEEEEEeCCC-------ccEEEEEEC-----CCCCE-EEEEcCCCcEEEEEcCCCceeEEecC-------
Confidence 78899999999988876543 122233332 12333 33445567899999988765332 11
Q ss_pred CCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCC
Q psy731 236 LFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLF 315 (494)
Q Consensus 236 ~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~ 315 (494)
.......+.+.. +..++.... .+..|.+||+++++.-+.....
T Consensus 163 ------------------------~~~~v~~~~~sp-----dg~~lasg~-~dg~i~iwd~~~~~~~~~~~~h------- 205 (321)
T 3ow8_A 163 ------------------------RGKFILSIAYSP-----DGKYLASGA-IDGIINIFDIATGKLLHTLEGH------- 205 (321)
T ss_dssp ------------------------SSSCEEEEEECT-----TSSEEEEEE-TTSCEEEEETTTTEEEEEECCC-------
T ss_pred ------------------------CCceEEEEEECC-----CCCEEEEEc-CCCeEEEEECCCCcEEEEEccc-------
Confidence 111123333331 233433332 3456889999887643332110
Q ss_pred cceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeE
Q psy731 316 GDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGAS 394 (494)
Q Consensus 316 ~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~ 394 (494)
...+..++.+|+ ++.|......++ ++|.+.+..+ .-+..|.. .....+
T Consensus 206 ------------~~~v~~l~~spd----~~~l~s~s~dg~i~iwd~~~~~~------------~~~~~~h~---~~v~~~ 254 (321)
T 3ow8_A 206 ------------AMPIRSLTFSPD----SQLLVTASDDGYIKIYDVQHANL------------AGTLSGHA---SWVLNV 254 (321)
T ss_dssp ------------SSCCCEEEECTT----SCEEEEECTTSCEEEEETTTCCE------------EEEECCCS---SCEEEE
T ss_pred ------------CCceeEEEEcCC----CCEEEEEcCCCeEEEEECCCcce------------eEEEcCCC---CceEEE
Confidence 123667899886 256666555443 6665543211 01122322 334567
Q ss_pred EeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 395 SLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 395 ~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
++. .+|..+++--....|..||..++
T Consensus 255 ~~s-p~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 255 AFC-PDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp EEC-TTSSEEEEEETTSCEEEEETTTT
T ss_pred EEC-CCCCEEEEEeCCCcEEEEeCCCC
Confidence 888 57777777778889999999874
No 158
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.94 E-value=1.6 Score=47.77 Aligned_cols=210 Identities=10% Similarity=0.104 Sum_probs=118.4
Q ss_pred ecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeec
Q psy731 194 TSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTS 273 (494)
Q Consensus 194 ~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~ 273 (494)
+.+.-+..++||+|.....|-|+|+++.+--++-. ++.+.....+++...+
T Consensus 95 t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~-----------------------------ip~g~~phg~~~~~~p 145 (595)
T 1fwx_A 95 TEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILE-----------------------------IPNAKGIHGLRPQKWP 145 (595)
T ss_dssp ETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEE-----------------------------CSSCCSEEEEEECCSS
T ss_pred CCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEe-----------------------------CCCCCCCcceeeeecC
Confidence 33444678999999999999999999998766511 1222234455553211
Q ss_pred CCCCCcEEEEec-----------------CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeee
Q psy731 274 ANCDDAFLYIAD-----------------SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSL 336 (494)
Q Consensus 274 ~~c~~~~~YI~D-----------------~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaL 336 (494)
+..|+|++. .....+-|.|.++.+. ..++.|+|. -+++++
T Consensus 146 ---~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v-------------~~qI~Vgg~-------pd~~~~ 202 (595)
T 1fwx_A 146 ---RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEV-------------AWQVLVSGN-------LDNCDA 202 (595)
T ss_dssp ---BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEE-------------EEEEEESSC-------CCCEEE
T ss_pred ---CCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeE-------------EEEEEeCCC-------ccceEE
Confidence 356777773 1123455666664321 112223331 255999
Q ss_pred ccCCCCCceeEEEeeCCCcc----------------eEeeec--hhhcCCCc------C--cccc--ccc-eEEecccCC
Q psy731 337 SPLTRDNFRVMYFHPLASTT----------------EFAVTT--KVLQNRSL------D--FSRS--NFD-FKVMGSRGT 387 (494)
Q Consensus 337 sp~~~~g~r~LYf~plss~~----------------ly~V~T--~~L~~~~~------~--~~~~--~~~-v~~~G~~G~ 387 (494)
||+ ++++|...-+|.. .+.+++ +.+.+... + +.+. ... +..+- -|
T Consensus 203 spd----Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg- 276 (595)
T 1fwx_A 203 DYE----GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IA- 276 (595)
T ss_dssp CSS----SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EE-
T ss_pred CCC----CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cC-
Confidence 987 4899998877722 111111 11212111 0 0000 011 11111 11
Q ss_pred CCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCc-----cccccceeeeeecCCeEecccceEEcCCceEEEEe---cC
Q psy731 388 GSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGE-----EYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS---NK 459 (494)
Q Consensus 388 ~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~-----~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls---nr 459 (494)
.+.-|+.++|..-.+|.+....+.|..+|..+.+ .+.+ +..++++=+.. .=|-++.++++|++|++. |+
T Consensus 277 -~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~-~~~v~~~v~vG-~gP~h~aF~~dG~aY~t~~ldsq 353 (595)
T 1fwx_A 277 -NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADP-RSAVVAEPELG-LGPLHTAFDGRGNAYTSLFLDSQ 353 (595)
T ss_dssp -SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCG-GGGEEECCBCC-SCEEEEEECTTSEEEEEETTTTE
T ss_pred -CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCc-ccceEEEcCCC-CCcceEEECCCCeEEEEEecCCc
Confidence 2467899995444799999999999999998610 1111 11233332222 348889999999999984 66
Q ss_pred chhhh
Q psy731 460 LPVFL 464 (494)
Q Consensus 460 l~~~~ 464 (494)
+-+|.
T Consensus 354 V~kwd 358 (595)
T 1fwx_A 354 VVKWN 358 (595)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66544
No 159
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.89 E-value=3 Score=40.44 Aligned_cols=207 Identities=10% Similarity=0.114 Sum_probs=114.5
Q ss_pred EEeeEEEcCCC-eEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 128 SVVKVQSDPCD-RLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 128 sV~~i~iD~~~-~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
.|..+...+++ ++.+.=.... .|..||+.+++....+.+.. ....+..+...- .+..+++.+
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~-----h~~~v~~~~~~~----~~~~~l~s~ 137 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGG--------DIILWDYDVQNKTSFIQGMG-----PGDAITGMKFNQ----FNTNQLFVS 137 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTS--------CEEEEETTSTTCEEEECCCS-----TTCBEEEEEEET----TEEEEEEEE
T ss_pred CEEEEEECCCCCCEEEEEcCCC--------eEEEEeCCCcccceeeecCC-----cCCceeEEEeCC----CCCCEEEEE
Confidence 45566666665 4444422222 58889999988877665432 234444554421 012344433
Q ss_pred eCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 207 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
+..+.|.+||+.++....+..+.- .......+.+.. +..+++...
T Consensus 138 -~~d~~i~iwd~~~~~~~~~~~~~~----------------------------~~~~v~~~~~~~-----~~~~l~~~~- 182 (383)
T 3ei3_B 138 -SIRGATTLRDFSGSVIQVFAKTDS----------------------------WDYWYCCVDVSV-----SRQMLATGD- 182 (383)
T ss_dssp -ETTTEEEEEETTSCEEEEEECCCC----------------------------SSCCEEEEEEET-----TTTEEEEEE-
T ss_pred -eCCCEEEEEECCCCceEEEeccCC----------------------------CCCCeEEEEECC-----CCCEEEEEC-
Confidence 456789999999766655522111 011233344432 234444443
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||+.......+..+ ...+..|+.+|++ ...|+-....+. ++|.+.+...
T Consensus 183 ~d~~i~i~d~~~~~~~~~~~h--------------------~~~v~~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 183 STGRLLLLGLDGHEIFKEKLH--------------------KAKVTHAEFNPRC---DWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp TTSEEEEEETTSCEEEEEECS--------------------SSCEEEEEECSSC---TTEEEEEETTSEEEEEEGGGCCS
T ss_pred CCCCEEEEECCCCEEEEeccC--------------------CCcEEEEEECCCC---CCEEEEEeCCCEEEEEeCCCCCc
Confidence 456788999965544444311 1247779998863 124555554443 5555543111
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
....+..++.. .....++++|.+|.++++--..+.|..||..++
T Consensus 240 ---------~~~~~~~~~~~---~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 240 ---------KNSYIAEMPHE---KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp ---------TTCEEEEEECS---SCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred ---------ccceEEEecCC---CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 01123333433 345678888438877777778899999998764
No 160
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.86 E-value=0.22 Score=48.39 Aligned_cols=111 Identities=10% Similarity=-0.038 Sum_probs=59.0
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhc
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQ 366 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~ 366 (494)
+..|.+||+.+++.|.+......+ ....+..|+++|+ ++.|......+. ++|.+.+..+.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~---------------h~~~v~~~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~ 181 (377)
T 3dwl_C 121 ARVISVCYFEQENDWWVSKHLKRP---------------LRSTILSLDWHPN----NVLLAAGCADRKAYVLSAYVRDVD 181 (377)
T ss_dssp SSCEEECCC-----CCCCEEECSS---------------CCSCEEEEEECTT----SSEEEEEESSSCEEEEEECCSSCC
T ss_pred CCeEEEEEECCcccceeeeEeecc---------------cCCCeEEEEEcCC----CCEEEEEeCCCEEEEEEEEecccC
Confidence 456889999887754332221110 1234778999986 357777666554 78888655443
Q ss_pred CCCcCc---c--ccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 367 NRSLDF---S--RSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 367 ~~~~~~---~--~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
...... . .....+..++.. .....++++ .+|.++++--....|..||..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s-p~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 182 AKPEASVWGSRLPFNTVCAEYPSG---GWVHAVGFS-PSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp -CCCSCSSCSCCCEEEEEECCCCS---SSEEEEEEC-TTSSCEEEEETTTEEC-CEECST
T ss_pred CCccccccccccchhhhhhcccCC---ceEEEEEEC-CCCCEEEEEeCCCcEEEEECCCC
Confidence 322110 0 001112222322 335677888 57766666667789999999874
No 161
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.77 E-value=2.8 Score=39.53 Aligned_cols=75 Identities=8% Similarity=0.152 Sum_probs=46.2
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+.=.... .|..||+.+++.++.+..+. .+..+.+. .+..++..+.
T Consensus 76 ~v~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~--------~v~~~~~~-----~~~~~l~~~~ 134 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSADY--------SIKLWDVSNGQCVATWKSPV--------PVKRVEFS-----PCGNYFLAIL 134 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTT--------EEEEEETTTCCEEEEEECSS--------CEEEEEEC-----TTSSEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCcEEEEeecCC--------CeEEEEEc-----cCCCEEEEec
Confidence 355666777666555422222 79999999999998887444 23334432 2344444443
Q ss_pred CC----CCeEEEEEccCCce
Q psy731 208 SG----HNHIVVYNYRTNDS 223 (494)
Q Consensus 208 s~----~~~iIVyd~~~~~~ 223 (494)
.. .+.|.+||+.++..
T Consensus 135 ~~~~~~~g~i~~~d~~~~~~ 154 (369)
T 3zwl_B 135 DNVMKNPGSINIYEIERDSA 154 (369)
T ss_dssp CCBTTBCCEEEEEEEEECTT
T ss_pred CCccCCCCEEEEEEecCCcc
Confidence 32 36899999887754
No 162
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.77 E-value=0.65 Score=46.83 Aligned_cols=156 Identities=11% Similarity=0.197 Sum_probs=86.9
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCc----eeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTND----SHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSA 274 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~----~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~ 274 (494)
.+..++++.+..+.|.+||+.++. .+.+. ......+.+.+..
T Consensus 242 ~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-------------------------------~~~~~v~~i~~~p--- 287 (430)
T 2xyi_A 242 LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-------------------------------AHTAEVNCLSFNP--- 287 (430)
T ss_dssp SCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-------------------------------CCSSCEEEEEECS---
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-------------------------------cCCCCeEEEEeCC---
Confidence 356788888889999999999874 22221 1112244444432
Q ss_pred CCCCcEEEEecCCCCeEEEEEcCCCcE--EEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEE-ee
Q psy731 275 NCDDAFLYIADSGHNHIVVYNYRTNDS--HIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYF-HP 351 (494)
Q Consensus 275 ~c~~~~~YI~D~~~~gliVydl~~~~s--wrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf-~p 351 (494)
+..+++++-..+..|.+||+++... ..+. + ....+..|+++|++ +.++. ..
T Consensus 288 --~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~----------------~----h~~~v~~i~~sp~~----~~~l~s~~ 341 (430)
T 2xyi_A 288 --YSEFILATGSADKTVALWDLRNLKLKLHSFE----------------S----HKDEIFQVQWSPHN----ETILASSG 341 (430)
T ss_dssp --SCTTEEEEEETTSEEEEEETTCTTSCSEEEE----------------C----CSSCEEEEEECSSC----TTEEEEEE
T ss_pred --CCCCEEEEEeCCCeEEEEeCCCCCCCeEEee----------------c----CCCCEEEEEECCCC----CCEEEEEe
Confidence 2344555545567799999986331 1111 0 12357889999873 45554 44
Q ss_pred CCCc-ceEeeechhhcCCCcCc--cc--cccceEEecccCCCCCCCeEEeeCCCCe-EEEeccCCCeEEEEeCCC
Q psy731 352 LAST-TEFAVTTKVLQNRSLDF--SR--SNFDFKVMGSRGTGSQSGASSLDEETGV-IFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 352 lss~-~ly~V~T~~L~~~~~~~--~~--~~~~v~~~G~~G~~~qs~g~~~D~~~G~-ly~~~~~~~aI~~w~~~~ 420 (494)
..+. ++|.+.+. ....... .+ ....+...|.. .....++.. .+|. ++++--..+.|..|+..+
T Consensus 342 ~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~-p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 342 TDRRLHVWDLSKI--GEEQSTEDAEDGPPELLFIHGGHT---AKISDFSWN-PNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp TTSCCEEEEGGGT--TCCCCHHHHHHCCTTEEEECCCCS---SCEEEEEEC-SSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCcEEEEeCCCC--ccccCccccccCCcceEEEcCCCC---CCceEEEEC-CCCCCEEEEEECCCCEEEeEccc
Confidence 4433 66766541 1111000 00 01112222222 335667888 5665 777777889999999876
No 163
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.76 E-value=1 Score=43.97 Aligned_cols=81 Identities=11% Similarity=0.245 Sum_probs=45.7
Q ss_pred EEeeEEEcCC-CeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 128 SVVKVQSDPC-DRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 128 sV~~i~iD~~-~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
.|..+...++ +.+.+.=.... .|..||+++++.++.+..+.. .......+..+.+.- .+..++..+
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg--------~v~iwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~----~~~~~l~~~ 233 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSN--------FASIWDLKAKKEVIHLSYTSP-NSGIKQQLSVVEWHP----KNSTRVATA 233 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSS--------CEEEEETTTTEEEEEECCCCC-SSCCCCCEEEEEECS----SCTTEEEEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCC--------CEEEEECCCCCcceEEecccc-ccccCCceEEEEECC----CCCCEEEEE
Confidence 4555666665 45544432222 689999999999988876531 000134455555531 122334333
Q ss_pred eCCCC---eEEEEEccCCc
Q psy731 207 DSGHN---HIVVYNYRTND 222 (494)
Q Consensus 207 Ds~~~---~iIVyd~~~~~ 222 (494)
+..+ .|.+||+.++.
T Consensus 234 -~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 234 -TGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp -ECCSSSCCCCEEETTSTT
T ss_pred -ECCCCCceEEEEeCCCCC
Confidence 3333 89999998863
No 164
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.71 E-value=5.6 Score=42.74 Aligned_cols=200 Identities=10% Similarity=0.126 Sum_probs=109.4
Q ss_pred EeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC
Q psy731 129 VVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS 208 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs 208 (494)
|..+...+++++.+.=.... .|..||+.+++.++++.... .....+...- ++.++..+..
T Consensus 16 v~~i~~sp~~~~la~~~~~g--------~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~s~-----~~~~l~~~~~ 75 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYSG--------RVEIWNYETQVEVRSIQVTE-------TPVRAGKFIA-----RKNWIIVGSD 75 (814)
T ss_dssp EEEEEECSSSSEEEEEETTS--------EEEEEETTTTEEEEEEECCS-------SCEEEEEEEG-----GGTEEEEEET
T ss_pred eEEEEECCCCCEEEEEeCCC--------EEEEEECCCCceEEEEecCC-------CcEEEEEEeC-----CCCEEEEEeC
Confidence 55566667666555432222 78899999999988877433 2344444432 3455555544
Q ss_pred CCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 209 GHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
.+.|.|||+.+++.-+. ..| ......+.+.. +..++.... .
T Consensus 76 -dg~i~vw~~~~~~~~~~~~~~-------------------------------~~~v~~~~~s~-----~~~~l~~~~-~ 117 (814)
T 3mkq_A 76 -DFRIRVFNYNTGEKVVDFEAH-------------------------------PDYIRSIAVHP-----TKPYVLSGS-D 117 (814)
T ss_dssp -TSEEEEEETTTCCEEEEEECC-------------------------------SSCEEEEEECS-----SSSEEEEEE-T
T ss_pred -CCeEEEEECCCCcEEEEEecC-------------------------------CCCEEEEEEeC-----CCCEEEEEc-C
Confidence 67899999998876443 211 11233333331 234444443 3
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhc
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQ 366 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~ 366 (494)
+..|.+||+.++......... ....+..++.+|.+ ++.|+.....+. .+|.+.+
T Consensus 118 dg~i~vw~~~~~~~~~~~~~~------------------~~~~v~~~~~~p~~---~~~l~~~~~dg~v~vwd~~~---- 172 (814)
T 3mkq_A 118 DLTVKLWNWENNWALEQTFEG------------------HEHFVMCVAFNPKD---PSTFASGCLDRTVKVWSLGQ---- 172 (814)
T ss_dssp TSEEEEEEGGGTSEEEEEEEC------------------CSSCEEEEEEETTE---EEEEEEEETTSEEEEEETTC----
T ss_pred CCEEEEEECCCCceEEEEEcC------------------CCCcEEEEEEEcCC---CCEEEEEeCCCeEEEEECCC----
Confidence 567889999877332211000 01226668888731 356666665553 4454422
Q ss_pred CCCcCccccccceEEecccCCCCCCCeEEeeC-CCCeEEEeccCCCeEEEEeCCCC
Q psy731 367 NRSLDFSRSNFDFKVMGSRGTGSQSGASSLDE-ETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 367 ~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~-~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.. ......+.. ......+++.+ .+|.++++--....|..||..++
T Consensus 173 -~~-------~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 173 -ST-------PNFTLTTGQ--ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp -SS-------CSEEEECCC--TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred -Cc-------ceeEEecCC--CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 11 111222221 12345566663 26766677777889999998764
No 165
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.63 E-value=3 Score=39.28 Aligned_cols=212 Identities=8% Similarity=0.000 Sum_probs=111.6
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
-.|..+...+++++.+.=.... .|..||+.+++.++++.-. ...+..+.+. .+..+++.+
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~~h-------~~~v~~~~~~-----~~~~~l~s~ 92 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDS--------SASVWYSLNGERLGTLDGH-------TGTIWSIDVD-----CFTKYCVTG 92 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSS--------CEEEEETTTCCEEEEECCC-------SSCEEEEEEC-----TTSSEEEEE
T ss_pred ceEEEEEEcCCCCEEEEEeCCC--------EEEEEeCCCchhhhhhhhc-------CCcEEEEEEc-----CCCCEEEEE
Confidence 3466667777776555422222 6889999999998876532 2334444442 134455544
Q ss_pred eCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 207 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
+..+.|.+||+.+++..+.-. .......+.+.. +..++.....
T Consensus 93 -~~dg~i~iwd~~~~~~~~~~~-------------------------------~~~~v~~~~~~~-----~~~~l~~~~~ 135 (369)
T 3zwl_B 93 -SADYSIKLWDVSNGQCVATWK-------------------------------SPVPVKRVEFSP-----CGNYFLAILD 135 (369)
T ss_dssp -ETTTEEEEEETTTCCEEEEEE-------------------------------CSSCEEEEEECT-----TSSEEEEEEC
T ss_pred -eCCCeEEEEECCCCcEEEEee-------------------------------cCCCeEEEEEcc-----CCCEEEEecC
Confidence 346789999999887755511 011123333331 2233333322
Q ss_pred C----CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeee
Q psy731 287 G----HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVT 361 (494)
Q Consensus 287 ~----~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~ 361 (494)
. ...|.+||+.++..-..... ....+. ..+.+. .-...+..++++|+ ++.|+.....+. .+|.+.
T Consensus 136 ~~~~~~g~i~~~d~~~~~~~~~~~~-~~~~~~---~~~~~~--~~~~~~~~~~~~~~----~~~l~~~~~dg~i~i~d~~ 205 (369)
T 3zwl_B 136 NVMKNPGSINIYEIERDSATHELTK-VSEEPI---HKIITH--EGLDAATVAGWSTK----GKYIIAGHKDGKISKYDVS 205 (369)
T ss_dssp CBTTBCCEEEEEEEEECTTTCCEEE-ECSSCS---EEEECC--TTCCCEEEEEECGG----GCEEEEEETTSEEEEEETT
T ss_pred CccCCCCEEEEEEecCCccceeecc-ccccee---eeccCC--cCccceeEEEEcCC----CCEEEEEcCCCEEEEEECC
Confidence 1 25788888876542111000 000000 000000 00125778899886 357776655553 455443
Q ss_pred chhhcCCCcCccccccceEE-ecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 362 TKVLQNRSLDFSRSNFDFKV-MGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 362 T~~L~~~~~~~~~~~~~v~~-~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
+. . ..+.. .+.. .....++++ .+|.++++--....|..||..++
T Consensus 206 ~~-----~-------~~~~~~~~~~---~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 206 NN-----Y-------EYVDSIDLHE---KSISDMQFS-PDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp TT-----T-------EEEEEEECCS---SCEEEEEEC-TTSSEEEEEETTSEEEEEETTTC
T ss_pred CC-----c-------EeEEEEecCC---CceeEEEEC-CCCCEEEEecCCceEEEEECCCC
Confidence 21 0 01111 1222 335678888 57877777777889999999874
No 166
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.54 E-value=3.5 Score=39.55 Aligned_cols=78 Identities=13% Similarity=0.102 Sum_probs=46.5
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+....++++.+-= +.+ -.|..||+.+++.++++.-.. +.+..+.+. .++...+|=
T Consensus 67 ~v~~~~~s~dg~~l~s~-s~D-------~~v~~wd~~~~~~~~~~~~h~-------~~v~~~~~~------~~~~~l~s~ 125 (319)
T 3frx_A 67 IVQDCTLTADGAYALSA-SWD-------KTLRLWDVATGETYQRFVGHK-------SDVMSVDID------KKASMIISG 125 (319)
T ss_dssp CEEEEEECTTSSEEEEE-ETT-------SEEEEEETTTTEEEEEEECCS-------SCEEEEEEC------TTSCEEEEE
T ss_pred cEEEEEECCCCCEEEEE-eCC-------CEEEEEECCCCCeeEEEccCC-------CcEEEEEEc------CCCCEEEEE
Confidence 34455566666554431 222 178889999999888765322 334444442 233344555
Q ss_pred CCCCeEEEEEccCCceeEE
Q psy731 208 SGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv 226 (494)
+..+.|.+||++......+
T Consensus 126 s~D~~i~vwd~~~~~~~~~ 144 (319)
T 3frx_A 126 SRDKTIKVWTIKGQCLATL 144 (319)
T ss_dssp ETTSCEEEEETTSCEEEEE
T ss_pred eCCCeEEEEECCCCeEEEE
Confidence 5667899999987666555
No 167
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.47 E-value=1.5 Score=43.13 Aligned_cols=205 Identities=7% Similarity=0.034 Sum_probs=95.6
Q ss_pred EeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC
Q psy731 129 VVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS 208 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs 208 (494)
|..+...+++++.+-- .. + .|..||+.+++......+.. ....+.+..+.+. .+..++. +=+
T Consensus 97 V~~~~~s~d~~~l~~s--~d--g-----~v~lWd~~~~~~~~~~~~~~---~~h~~~V~~v~~s-----pdg~~l~-sgs 158 (357)
T 4g56_B 97 VTDVAWVSEKGILVAS--DS--G-----AVELWEILEKESLLVNKFAK---YEHDDIVKTLSVF-----SDGTQAV-SGG 158 (357)
T ss_dssp EEEEEEETTTEEEEEE--TT--S-----CEEEC--------CCCCEEE---CCCSSCEEEEEEC-----SSSSEEE-EEE
T ss_pred EEEEEEcCCCCEEEEE--CC--C-----EEEEeeccccceeEEEeecc---CCCCCCEEEEEEC-----CCCCEEE-EEe
Confidence 5666666777776542 22 1 47778888876543222111 0122334444442 1333443 334
Q ss_pred CCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 209 GHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
..+.|.+||+.+++..+. ..| ......+++.. ++...+++-..
T Consensus 159 ~dg~v~iwd~~~~~~~~~~~~h-------------------------------~~~v~~v~~s~-----~~~~~~~s~~~ 202 (357)
T 4g56_B 159 KDFSVKVWDLSQKAVLKSYNAH-------------------------------SSEVNCVAACP-----GKDTIFLSCGE 202 (357)
T ss_dssp TTSCEEEEETTTTEEEEEECCC-------------------------------SSCEEEEEECT-----TCSSCEEEEET
T ss_pred CCCeEEEEECCCCcEEEEEcCC-------------------------------CCCEEEEEEcc-----CCCceeeeecc
Confidence 456799999998876544 110 01122333321 11122333334
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhc
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQ 366 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~ 366 (494)
+..|.+||+++++.-+...... ....+..++.+|++ ...|.-....+. ++|.+.+..+
T Consensus 203 dg~v~~wd~~~~~~~~~~~~~~-----------------~~~~v~~v~~sp~~---~~~la~g~~d~~i~~wd~~~~~~- 261 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRIDFCA-----------------SDTIPTSVTWHPEK---DDTFACGDETGNVSLVNIKNPDS- 261 (357)
T ss_dssp TSCEEECCTTSSSCBCBCCCTT-----------------CCSCEEEEEECTTS---TTEEEEEESSSCEEEEESSCGGG-
T ss_pred CCceEEEECCCCceeeeeeecc-----------------ccccccchhhhhcc---cceEEEeecccceeEEECCCCcE-
Confidence 5678899988765221110000 01235678888863 334444444332 5565543211
Q ss_pred CCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCc
Q psy731 367 NRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGE 422 (494)
Q Consensus 367 ~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~ 422 (494)
.....|.. .....+++.|..+.+..+--....|..||.++++
T Consensus 262 -----------~~~~~~~~---~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 262 -----------AQTSAVHS---QNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp -----------CEEECCCS---SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred -----------eEEEeccc---eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 11122322 2245677774444555555567789999998753
No 168
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=94.42 E-value=3.4 Score=38.97 Aligned_cols=222 Identities=9% Similarity=0.065 Sum_probs=106.3
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE--ecCccccC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII--HHNYLHFD 234 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv--~~~~~~~d 234 (494)
.|..||+++++.++.+.-- ......+..+.... +..+++.+. ..+.|.+||+.+++..+. .+..+.++
T Consensus 139 ~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~-----~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 208 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIFGGV----EGHRDEVLSADYDL-----LGEKIMSCG-MDHSLKLWRINSKRMMNAIKESYDYNPN 208 (366)
T ss_dssp CEEEEETTTTEEEEEECST----TSCSSCEEEEEECT-----TSSEEEEEE-TTSCEEEEESCSHHHHHHHHHHHTCCGG
T ss_pred eEEEEEeecCeEEEEeccc----ccccCceeEEEECC-----CCCEEEEec-CCCCEEEEECCCCccccccceeEEecCC
Confidence 5888999999888766310 11334455555531 334454443 357899999998765443 22223333
Q ss_pred CCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCC
Q psy731 235 PLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPL 314 (494)
Q Consensus 235 p~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~ 314 (494)
.....+.........|... .........+..+ +.++... ..+..|.+||+.+.+.- ...+. +.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~-------~~~l~~~-~~d~~i~~wd~~~~~~~---~~~~~--~~ 271 (366)
T 3k26_A 209 KTNRPFISQKIHFPDFSTR----DIHRNYVDCVRWL-------GDLILSK-SCENAIVCWKPGKMEDD---IDKIK--PS 271 (366)
T ss_dssp GCSSCCCCEEECCCSEEEC----SSCSSCCCEEEEE-------TTEEEEE-CSSSEEEEEEESSTTCC---GGGCC--TT
T ss_pred CCcccccceeeccCccccc----cCCcceEEEEEEc-------CCEEEEE-ecCCEEEEEeCCCcccc---ccccc--cC
Confidence 2222211111110011110 0012223444443 1233333 34677889998776420 00011 00
Q ss_pred CcceEEcCEEee-eecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccce-EEecccCCCCCC
Q psy731 315 FGDFTIGGVNFQ-WQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDF-KVMGSRGTGSQS 391 (494)
Q Consensus 315 ~~~~~v~G~~f~-~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v-~~~G~~G~~~qs 391 (494)
......- ..+. ....+..|+++|+. + ++.|+.....+. ++|.+.+..+.. ... ...+.. .....
T Consensus 272 ~~~~~~~-~~~~~~~~~v~~~~~s~~~-~-~~~l~~~~~dg~i~vwd~~~~~~~~---------~~~~~~~~~~-~~~~v 338 (366)
T 3k26_A 272 ESNVTIL-GRFDYSQCDIWYMRFSMDF-W-QKMLALGNQVGKLYVWDLEVEDPHK---------AKCTTLTHHK-CGAAI 338 (366)
T ss_dssp CCCEEEE-EEEECSSCCSSCCCCEECT-T-SSEEEEECTTSCEEEEECCSSSGGG---------CEEEEECCTT-CCSCE
T ss_pred Ccchhee-ccccccCCcEEEEEEcCCC-C-CcEEEEEecCCcEEEEECCCCCCcc---------ccceEEcccc-cCCce
Confidence 0100000 0111 12347778888862 1 256766655443 667765532211 011 112221 01335
Q ss_pred CeEEeeCCCCeEEEeccCCCeEEEEeCC
Q psy731 392 GASSLDEETGVIFYALLVKSGVGCWNTF 419 (494)
Q Consensus 392 ~g~~~D~~~G~ly~~~~~~~aI~~w~~~ 419 (494)
..++++ .+|.+.++--....|..||..
T Consensus 339 ~~~~~s-~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 339 RQTSFS-RDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEEEC-TTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEeC-CCCCeEEEEeCCCEEEEEEec
Confidence 667888 578777777778899999875
No 169
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.39 E-value=6.9 Score=42.40 Aligned_cols=62 Identities=10% Similarity=0.022 Sum_probs=44.8
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC-----CCCeEEEEEccCCc-eeEEe
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS-----GHNHIVVYNYRTND-SHIIH 227 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs-----~~~~iIVyd~~~~~-~~rv~ 227 (494)
.|+++|.+|++++-++.++.. ....+....++|. ++.||+.-+ ..+.|..||.++|+ .|+++
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~--~~~~~~~ssP~v~-------~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDI--KVGSTLTIAPYVV-------KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCG--GGTCBCCSCCEEE-------TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEeecCCCC--CccceeecCCEEE-------CCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 799999999999988887651 1112344555663 457888765 35789999999987 58884
No 170
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.38 E-value=3.6 Score=39.09 Aligned_cols=216 Identities=9% Similarity=-0.034 Sum_probs=110.5
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+.=.... .|..||+.+++....+.+.. ....+..+.+. .+..+++.+.
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~~~~~~~~~~~~-----~~~~v~~~~~~-----~~~~~l~~~~ 115 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDR--------NAYVWTLKGRTWKPTLVILR-----INRAARCVRWA-----PNEKKFAVGS 115 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTS--------CEEEEEEETTEEEEEEECCC-----CSSCEEEEEEC-----TTSSEEEEEE
T ss_pred cccEEEEeCCCCEEEEEcCCC--------eEEEEECCCCeeeeeEEeec-----CCCceeEEEEC-----CCCCEEEEEe
Confidence 455566666666555422222 58889999988777766544 33444555543 1345555554
Q ss_pred CCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 208 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
..+.|.+||+..+..+.+..... .........+.+.. +..+++... .
T Consensus 116 -~d~~v~i~d~~~~~~~~~~~~~~--------------------------~~~~~~i~~~~~~~-----~~~~l~~~~-~ 162 (372)
T 1k8k_C 116 -GSRVISICYFEQENDWWVCKHIK--------------------------KPIRSTVLSLDWHP-----NSVLLAAGS-C 162 (372)
T ss_dssp -TTSSEEEEEEETTTTEEEEEEEC--------------------------TTCCSCEEEEEECT-----TSSEEEEEE-T
T ss_pred -CCCEEEEEEecCCCcceeeeeee--------------------------cccCCCeeEEEEcC-----CCCEEEEEc-C
Confidence 35679999999988655521110 00012233444432 233444432 3
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEe-e---eecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeec
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNF-Q---WQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTT 362 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f-~---~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T 362 (494)
+..|.+||+.....- ......+-.... -.|+.. . ....+..++++|+ ++.|+.....+. ++|.+.+
T Consensus 163 dg~i~~~d~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVE----ERPAPTPWGSKM-PFGELMFESSSSCGWVHGVCFSAN----GSRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp TSCEEEEECCCTTTS----CCCCCBTTBSCC-CTTCEEEECCCCSSCEEEEEECSS----SSEEEEEETTTEEEEEEGGG
T ss_pred CCCEEEEEccccccc----cccccccccccc-chhhheEecCCCCCeEEEEEECCC----CCEEEEEeCCCEEEEEECCC
Confidence 567888987532210 000000000000 001111 1 1234788999986 357777665553 5565543
Q ss_pred hhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 363 KVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
..+. . +..+.. .....++++ .+|.++.+- ..+.|..|+...
T Consensus 234 ~~~~----------~--~~~~~~---~~v~~~~~~-~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 234 KMAV----------A--TLASET---LPLLAVTFI-TESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp TTEE----------E--EEECSS---CCEEEEEEE-ETTEEEEEE-TTSSCEEEEEET
T ss_pred Ccee----------E--EEccCC---CCeEEEEEe-cCCCEEEEE-eCCeEEEEEccC
Confidence 2110 1 111222 234567888 577666655 889999999865
No 171
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.35 E-value=2.1 Score=41.94 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=62.8
Q ss_pred CEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCce-eEEecCccccC
Q psy731 156 PSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDS-HIIHHNYLHFD 234 (494)
Q Consensus 156 Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~-~rv~~~~~~~d 234 (494)
-.|.++|+++++++.++.++. ...++++ +..+|+++. .+.|.++|.++|+. |+... .
T Consensus 249 g~l~~~d~~tG~~~w~~~~~~---------~~~~~~~-------~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~--~--- 306 (376)
T 3q7m_A 249 GNLTALDLRSGQIMWKRELGS---------VNDFIVD-------GNRIYLVDQ-NDRVMALTIDGGVTLWTQSD--L--- 306 (376)
T ss_dssp SCEEEEETTTCCEEEEECCCC---------EEEEEEE-------TTEEEEEET-TCCEEEEETTTCCEEEEECT--T---
T ss_pred cEEEEEECCCCcEEeeccCCC---------CCCceEE-------CCEEEEEcC-CCeEEEEECCCCcEEEeecc--c---
Confidence 478999999999987776543 2345553 678999976 46799999998875 55421 0
Q ss_pred CCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcE-EEEe
Q psy731 235 PLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDS-HIIH 305 (494)
Q Consensus 235 p~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~s-wrv~ 305 (494)
....+..+++. +..+|+.+. ...|.++|.++++. |+..
T Consensus 307 -------------------------~~~~~~~~~~~-------~~~l~v~~~-~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 307 -------------------------LHRLLTSPVLY-------NGNLVVGDS-EGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp -------------------------TTSCCCCCEEE-------TTEEEEECT-TSEEEEEETTTCCEEEEEE
T ss_pred -------------------------CCCcccCCEEE-------CCEEEEEeC-CCeEEEEECCCCcEEEEEe
Confidence 00112223333 367888874 45799999988774 5554
No 172
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.29 E-value=6.6 Score=41.76 Aligned_cols=28 Identities=14% Similarity=0.269 Sum_probs=19.7
Q ss_pred EEeeCCCCeEEEeccCCC----eEEEEeCCCC
Q psy731 394 SSLDEETGVIFYALLVKS----GVGCWNTFRG 421 (494)
Q Consensus 394 ~~~D~~~G~ly~~~~~~~----aI~~w~~~~~ 421 (494)
.++++....||++....+ .|+.||.+++
T Consensus 361 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp EEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred eEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 578844446777766554 8999998764
No 173
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.91 E-value=4.4 Score=38.38 Aligned_cols=215 Identities=9% Similarity=0.071 Sum_probs=104.6
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECC--CCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEE
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLR--QQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYI 205 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~--t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYI 205 (494)
.|..+...+++++.+.=.... .|..||+. +.+.++.+. . ....+..+.... ..+..+++.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~--~-----h~~~v~~~~~~~---~~~~~~l~s 74 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDK--------TIKIFEVEGETHKLIDTLT--G-----HEGPVWRVDWAH---PKFGTILAS 74 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTS--------CEEEEEEETTEEEEEEEEC--C-----CSSCEEEEEECC---GGGCSEEEE
T ss_pred cEEEEEEcCCCCEEEEEECCC--------cEEEEecCCCcceeeeEec--C-----CCCcEEEEEeCC---CCCCCEEEE
Confidence 455566667666555322111 47777776 444444432 2 222333333321 001344554
Q ss_pred eeCCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEec
Q psy731 206 ADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIAD 285 (494)
Q Consensus 206 tDs~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D 285 (494)
+. ..+.|.+||+.+++...+.... ........+.+.... ...+++...
T Consensus 75 ~~-~dg~v~iwd~~~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~---~~~~l~~~~ 122 (379)
T 3jrp_A 75 CS-YDGKVLIWKEENGRWSQIAVHA----------------------------VHSASVNSVQWAPHE---YGPLLLVAS 122 (379)
T ss_dssp EE-TTSCEEEEEEETTEEEEEEEEC----------------------------CCSSCEEEEEECCGG---GCSEEEEEE
T ss_pred ec-cCCEEEEEEcCCCceeEeeeec----------------------------CCCcceEEEEeCCCC---CCCEEEEec
Confidence 44 3578999999998633331100 011123334443210 023444432
Q ss_pred CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCC---------CceeEEEeeCCCc-
Q psy731 286 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRD---------NFRVMYFHPLAST- 355 (494)
Q Consensus 286 ~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~---------g~r~LYf~plss~- 355 (494)
.+..|.+||+.++....... ..+ ....+..++.+|.... ..+.|......+.
T Consensus 123 -~d~~i~v~d~~~~~~~~~~~-------------~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i 184 (379)
T 3jrp_A 123 -SDGKVSVVEFKENGTTSPII-------------IDA----HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLV 184 (379)
T ss_dssp -TTSEEEEEECCTTSCCCEEE-------------EEC----CTTCEEEEEECCCC----------CTTCEEEEEETTSCE
T ss_pred -CCCcEEEEecCCCCceeeEE-------------ecC----CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeE
Confidence 45678899998764211110 000 1133666777763100 1256666655554
Q ss_pred ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCC--CeEEEeccCCCeEEEEeCCCC
Q psy731 356 TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEET--GVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 356 ~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~--G~ly~~~~~~~aI~~w~~~~~ 421 (494)
++|.+.+.... ........+.. .....+++.|.. |.++++--....|..||..++
T Consensus 185 ~i~d~~~~~~~--------~~~~~~~~~h~---~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 185 KIWKYNSDAQT--------YVLESTLEGHS---DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEEEETTTTE--------EEEEEEECCCS---SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEEecCCCcc--------eeeEEEEeccc---CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 66666432110 00001111222 334577888432 788888778889999998873
No 174
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.83 E-value=4.5 Score=39.00 Aligned_cols=29 Identities=3% Similarity=0.016 Sum_probs=21.8
Q ss_pred CCeEEeeCCCC----------eEEEeccCCCeEEEEeCCC
Q psy731 391 SGASSLDEETG----------VIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 391 s~g~~~D~~~G----------~ly~~~~~~~aI~~w~~~~ 420 (494)
...++.. .+| .++++--....|..|+.++
T Consensus 357 v~~~~~~-~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 357 VFDVKFL-KKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEEEEEE-CTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred eeEEEec-cccccccccccccceEEEecCCCcEEEEEcCC
Confidence 4567777 565 6777777888999999765
No 175
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.75 E-value=6.2 Score=39.49 Aligned_cols=184 Identities=9% Similarity=0.120 Sum_probs=96.8
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEec-CccccCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHH-NYLHFDP 235 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~-~~~~~dp 235 (494)
.|..||+.+++....+.+.. ....+..+... ..++...+|=+..+.|.+||++++....+.. +..
T Consensus 143 ~i~lWd~~~~~~~~~~~~~g-----H~~~V~~l~f~-----p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---- 208 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIG-----AGGSITGLKFN-----PLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTI---- 208 (435)
T ss_dssp CEEEECSSCCSCCEEECCCS-----SSCCCCEEEEC-----SSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSC----
T ss_pred EEEEEECCCCCceeEEEccC-----CCCCEEEEEEe-----CCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCC----
Confidence 57788888876555444432 34455566552 1223334454566789999998877666522 111
Q ss_pred CCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCC
Q psy731 236 LFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLF 315 (494)
Q Consensus 236 ~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~ 315 (494)
......+.+.. +..++...+ .+..|.+||+.+...+.+.-
T Consensus 209 -------------------------~~~~~~~~~~~-----~~~~l~~g~-~dg~i~~wd~~~~~~~~~~~--------- 248 (435)
T 4e54_B 209 -------------------------NIWFCSLDVSA-----SSRMVVTGD-NVGNVILLNMDGKELWNLRM--------- 248 (435)
T ss_dssp -------------------------SCCCCCEEEET-----TTTEEEEEC-SSSBEEEEESSSCBCCCSBC---------
T ss_pred -------------------------CccEEEEEECC-----CCCEEEEEe-CCCcEeeeccCcceeEEEec---------
Confidence 01112233321 234444443 34568899987654322210
Q ss_pred cceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeE
Q psy731 316 GDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGAS 394 (494)
Q Consensus 316 ~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~ 394 (494)
-...|..|+++|++ ...|.-...-+. ++|.+.+..... ......+.. .....+
T Consensus 249 -----------h~~~v~~v~~~p~~---~~~~~s~s~d~~v~iwd~~~~~~~~---------~~~~~~~h~---~~v~~~ 302 (435)
T 4e54_B 249 -----------HKKKVTHVALNPCC---DWFLATASVDQTVKIWDLRQVRGKA---------SFLYSLPHR---HPVNAA 302 (435)
T ss_dssp -----------CSSCEEEEEECTTC---SSEEEEEETTSBCCEEETTTCCSSS---------CCSBCCBCS---SCEEEC
T ss_pred -----------ccceEEeeeecCCC---ceEEEEecCcceeeEEecccccccc---------eEEEeeecc---ccccce
Confidence 01347789998863 233444444443 566543321100 011112222 223456
Q ss_pred EeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 395 SLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 395 ~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
+++ .+|..+++--..+.|..||...+
T Consensus 303 ~~s-pdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 303 CFS-PDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp CBC-TTSSEEEEEESSSCEEEEESSSS
T ss_pred eEC-CCCCeeEEEcCCCEEEEEECCCC
Confidence 677 57877777778889999998764
No 176
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.74 E-value=12 Score=42.77 Aligned_cols=212 Identities=8% Similarity=0.028 Sum_probs=109.3
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
-.|..+...+++++.+.=.... .|..||+.+++.++++.-. ......+.+. .++.++..+
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~--------~i~vw~~~~~~~~~~~~~h-------~~~v~~~~~s-----~~~~~l~s~ 675 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADK--------TLQVFKAETGEKLLDIKAH-------EDEVLCCAFS-----SDDSYIATC 675 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEEECCC-------SSCEEEEEEC-----TTSSEEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCC--------eEEEEECCCCCEEEEeccC-------CCCEEEEEEe-----cCCCEEEEE
Confidence 4577777777777665421111 6899999999988876522 2334444442 234555555
Q ss_pred eCCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEec
Q psy731 207 DSGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIAD 285 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D 285 (494)
. ..+.|.|||+.+++.-+. ..|. .....+.+... .+..+.++-
T Consensus 676 ~-~d~~v~vwd~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~----~~~~~l~sg 719 (1249)
T 3sfz_A 676 S-ADKKVKIWDSATGKLVHTYDEHS-------------------------------EQVNCCHFTNK----SNHLLLATG 719 (1249)
T ss_dssp E-TTSEEEEEETTTCCEEEEEECCS-------------------------------SCEEEEEECSS----SSCCEEEEE
T ss_pred e-CCCeEEEEECCCCceEEEEcCCC-------------------------------CcEEEEEEecC----CCceEEEEE
Confidence 3 456799999999876544 1111 11222233211 122233333
Q ss_pred CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechh
Q psy731 286 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKV 364 (494)
Q Consensus 286 ~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~ 364 (494)
..+..|.+||+.+++.-..... ....+..++++|++ +.|......+. ++|.+.+..
T Consensus 720 ~~d~~v~vwd~~~~~~~~~~~~-------------------h~~~v~~~~~sp~~----~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQKECRNTMFG-------------------HTNSVNHCRFSPDD----ELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp ETTSCEEEEETTSSSEEEEECC-------------------CSSCEEEEEECSST----TEEEEEESSSEEEEEEGGGTE
T ss_pred eCCCeEEEEECCCcchhheecC-------------------CCCCEEEEEEecCC----CEEEEEECCCeEEEEeCCCCc
Confidence 4466789999988764332211 01346778888862 46666655554 666654432
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
....-.........-....+. ......+++. .+|...++- ..+.|..||..++
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s-~dg~~l~~~-~~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 777 ERKSINVKRFFLSSEDPPEDV--EVIVKCCSWS-ADGDKIIVA-AKNKVLLFDIHTS 829 (1249)
T ss_dssp EEEEEECCCCC--------CC--CCCBCCCCBC-TTSSEEEEE-ETTEEEEEETTTC
T ss_pred ccceecccccccccCCccccc--cceEEEEEEC-CCCCEEEEE-cCCcEEEEEecCC
Confidence 111000000000000000000 1123456677 466544443 3688999998764
No 177
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.71 E-value=5.1 Score=38.40 Aligned_cols=80 Identities=13% Similarity=0.185 Sum_probs=45.0
Q ss_pred eEEeeEEEcC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEE
Q psy731 127 TSVVKVQSDP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYI 205 (494)
Q Consensus 127 vsV~~i~iD~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYI 205 (494)
-.|..+...+ ++++.+.=.... .|..||+.+++.++.+.++.. ...+.+ .....+..+++.
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~ 161 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDK--------TLKVWDTNTLQTADVFNFEET--------VYSHHM--SPVSTKHCLVAV 161 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTS--------EEEEEETTTTEEEEEEECSSC--------EEEEEE--CSSCSSCCEEEE
T ss_pred CcEEEEEEccCCCcEEEEEeCCC--------eEEEeeCCCCccceeccCCCc--------eeeeEe--ecCCCCCcEEEE
Confidence 3455666655 443433321111 688999999999988886651 112222 111112234444
Q ss_pred eeCCCCeEEEEEccCCceeE
Q psy731 206 ADSGHNHIVVYNYRTNDSHI 225 (494)
Q Consensus 206 tDs~~~~iIVyd~~~~~~~r 225 (494)
+ +..+.|.+||+.++..-+
T Consensus 162 ~-~~~~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 162 G-TRGPKVQLCDLKSGSCSH 180 (408)
T ss_dssp E-ESSSSEEEEESSSSCCCE
T ss_pred E-cCCCeEEEEeCCCcceee
Confidence 4 445679999998876533
No 178
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.67 E-value=5.3 Score=38.44 Aligned_cols=115 Identities=10% Similarity=-0.054 Sum_probs=58.5
Q ss_pred EEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEee
Q psy731 282 YIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAV 360 (494)
Q Consensus 282 YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V 360 (494)
+++-..+..|.+||+++++.-...... ...+..++++|+ ++.|+.....+. .+|.+
T Consensus 303 l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------------~~~i~~~~~s~~----~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 303 VISCSMDGSVRLWSLKQNTLLALSIVD-------------------GVPIFAGRISQD----GQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECT-------------------TCCEEEEEECTT----SSEEEEEETTSCEEEEEC
T ss_pred EEEEeCCCcEEEEECCCCcEeEecccC-------------------CccEEEEEEcCC----CCEEEEEECCCeEEEEEC
Confidence 333345678899999877643322110 123677899886 357777665554 77777
Q ss_pred echhhcCCCcCcc--cc--ccceEEecc-cCCCC--CCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 361 TTKVLQNRSLDFS--RS--NFDFKVMGS-RGTGS--QSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 361 ~T~~L~~~~~~~~--~~--~~~v~~~G~-~G~~~--qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
.+.......+... .. ....+.+.. ++... ....+++. .+|.++++--....|..|+..+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 360 KKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWN-CAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp HHHHC--------------CEECCEEEEECCTTCCCCEEEEEEC-TTSSEEEEEESSSCCEEEECCC
T ss_pred CCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEcc-CCCceEEEEecCceEEEEeecC
Confidence 6644211111000 00 000011111 11111 34567777 5665555555677788888653
No 179
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.52 E-value=3.3 Score=40.76 Aligned_cols=100 Identities=12% Similarity=0.186 Sum_probs=59.5
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee--CCCCeEEEEEccCCce-eEEecCcccc
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD--SGHNHIVVYNYRTNDS-HIIHHNYLHF 233 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD--s~~~~iIVyd~~~~~~-~rv~~~~~~~ 233 (494)
+|..||+++++.++.+.... .......+... .++.+++..- +..+.|.+||+.++.. ....
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~------ 262 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPH-----EGTRPVHAVFV-----SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQ------ 262 (402)
T ss_dssp EEEEEETTTTEEEEEEECSS-----CSSSCCEEEEC-----STTEEEEEEECTTCCEEEEEEETTBCSSCSEEE------
T ss_pred cEEEEeCCCCceeeeeccCC-----CCCcceEEEEc-----CCCcEEEEeccCCCCceEEEEcCccccCCceEE------
Confidence 78889999998888774222 12223444442 1344444442 5667899999988664 1110
Q ss_pred CCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCc
Q psy731 234 DPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTND 300 (494)
Q Consensus 234 dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~ 300 (494)
. .........+.++. ++.++|++-..+..|.+||+.+++
T Consensus 263 -----------------~------~~~~~~v~~~~~s~-----~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 263 -----------------E------LDTSSGVLLPFFDP-----DTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp -----------------E------CCCCSSCEEEEEET-----TTTEEEEEETTCSCEEEEEECSST
T ss_pred -----------------e------ccCCCceeEEEEcC-----CCCEEEEEEcCCCeEEEEEecCCC
Confidence 0 00111234444442 356788887677889999999877
No 180
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.49 E-value=5.3 Score=39.35 Aligned_cols=139 Identities=12% Similarity=0.054 Sum_probs=78.0
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC--CCCeEEEEEccCCceeEE-ecCcccc
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS--GHNHIVVYNYRTNDSHII-HHNYLHF 233 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs--~~~~iIVyd~~~~~~~rv-~~~~~~~ 233 (494)
.|..||+.+++.++.+.- ..+.+..+.+. ..+.+++++-+ ..+.|.+||+.+++..+. .+
T Consensus 240 ~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~-----p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~----- 302 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTN-------HNAAVKAVAWC-----PWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA----- 302 (401)
T ss_dssp CEEEEETTCSSEEEEECC-------CSSCCCEEEEC-----TTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-----
T ss_pred eEEEccCCCCCccEEecC-------CcceEEEEEEC-----CCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-----
Confidence 577788888877765432 23344555542 13445566544 578899999998876554 11
Q ss_pred CCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEe-cCCCCeEEEEEcCCCcEEEEecCCcccC
Q psy731 234 DPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIA-DSGHNHIVVYNYRTNDSHIIHHNYLHFD 312 (494)
Q Consensus 234 dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~-D~~~~gliVydl~~~~swrv~~~~~~~d 312 (494)
.+....+.... +..+++.+ ...+..|.+||+.+++.-+...-
T Consensus 303 ---------------------------~~~v~~~~~s~-----~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~----- 345 (401)
T 4aez_A 303 ---------------------------GSQVTSLIWSP-----HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI----- 345 (401)
T ss_dssp ---------------------------SSCEEEEEECS-----SSSEEEEEECTTTCEEEEEEEETTEEEEEEEE-----
T ss_pred ---------------------------CCcEEEEEECC-----CCCeEEEEeecCCCcEEEEecCCccceeEEEe-----
Confidence 11233344432 23444444 33467889999887654332110
Q ss_pred CCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 313 PLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 313 P~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+ ....+..++++|+ +++|+.....+. ++|.+.+..+
T Consensus 346 --------~~----h~~~v~~~~~s~d----g~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 346 --------PA----HDTRVLYSALSPD----GRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp --------EC----CSSCCCEEEECTT----SSEEEEECTTSEEEEEECCC---
T ss_pred --------cC----CCCCEEEEEECCC----CCEEEEEeCCCcEEEEECCCCcc
Confidence 00 0134777899986 357776665554 6777765443
No 181
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.38 E-value=7.2 Score=41.88 Aligned_cols=202 Identities=12% Similarity=0.080 Sum_probs=102.0
Q ss_pred EeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC
Q psy731 129 VVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS 208 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs 208 (494)
|..+...+++++.+.=.... .|.+||+.+++.++++.-.. ..+..+.+. .+..++..+.
T Consensus 58 v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~~~~~~~~~~~-------~~v~~~~~s-----~~~~~l~~~~- 116 (814)
T 3mkq_A 58 VRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGEKVVDFEAHP-------DYIRSIAVH-----PTKPYVLSGS- 116 (814)
T ss_dssp EEEEEEEGGGTEEEEEETTS--------EEEEEETTTCCEEEEEECCS-------SCEEEEEEC-----SSSSEEEEEE-
T ss_pred EEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCcEEEEEecCC-------CCEEEEEEe-----CCCCEEEEEc-
Confidence 44555555555444322222 78889999998887765322 233344432 2344555444
Q ss_pred CCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCC
Q psy731 209 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGH 288 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~ 288 (494)
..+.|.+||+.++......- .........+..... +...++.. ..+
T Consensus 117 ~dg~i~vw~~~~~~~~~~~~-----------------------------~~~~~~v~~~~~~p~----~~~~l~~~-~~d 162 (814)
T 3mkq_A 117 DDLTVKLWNWENNWALEQTF-----------------------------EGHEHFVMCVAFNPK----DPSTFASG-CLD 162 (814)
T ss_dssp TTSEEEEEEGGGTSEEEEEE-----------------------------ECCSSCEEEEEEETT----EEEEEEEE-ETT
T ss_pred CCCEEEEEECCCCceEEEEE-----------------------------cCCCCcEEEEEEEcC----CCCEEEEE-eCC
Confidence 35689999998874332200 001112333343310 11223332 245
Q ss_pred CeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcC
Q psy731 289 NHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQN 367 (494)
Q Consensus 289 ~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~ 367 (494)
..|.+||+.+++.-...... ...++..++.+|.. + ++.|+...-.+. .+|.+.+...
T Consensus 163 g~v~vwd~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~-~-~~~l~~~~~dg~i~~~d~~~~~~-- 220 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTG------------------QERGVNYVDYYPLP-D-KPYMITASDDLTIKIWDYQTKSC-- 220 (814)
T ss_dssp SEEEEEETTCSSCSEEEECC------------------CTTCCCEEEECCST-T-CCEEEEECTTSEEEEEETTTTEE--
T ss_pred CeEEEEECCCCcceeEEecC------------------CCCCEEEEEEEECC-C-CCEEEEEeCCCEEEEEECCCCcE--
Confidence 67889998765421111100 01345667777721 1 245555544443 4444322110
Q ss_pred CCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 368 RSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 368 ~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
..+..+.. .....+++. .+|.++++--....|..||..++
T Consensus 221 ----------~~~~~~~~---~~v~~~~~~-~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 221 ----------VATLEGHM---SNVSFAVFH-PTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp ----------EEEEECCS---SCEEEEEEC-SSSSEEEEEETTSCEEEEETTTC
T ss_pred ----------EEEEcCCC---CCEEEEEEc-CCCCEEEEEeCCCeEEEEECCCC
Confidence 01111222 234567787 57776677677788999998864
No 182
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.32 E-value=5.4 Score=37.49 Aligned_cols=58 Identities=5% Similarity=0.036 Sum_probs=37.3
Q ss_pred CCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 391 SGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 391 s~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
...++++ .+|.++++--....|..||..++.. +..+.. .-....++.+.++|.+.+++
T Consensus 276 v~~~~~s-p~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~---~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 276 VNGIAFH-PVHGTLATVGSDGRFSFWDKDARTK-----LKTSEQ---LDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp EEEEEEC-TTTCCEEEEETTSCEEEEETTTTEE-----EEECCC---CSSCEEEEEECTTSSCEEEE
T ss_pred eEEEEEe-cCCCEEEEEccCCeEEEEECCCCcE-----EEEecC---CCCCceEEEECCCCCeEEEE
Confidence 4567888 5776666666788899999987422 122211 11356678888888765554
No 183
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.15 E-value=6.3 Score=37.76 Aligned_cols=31 Identities=13% Similarity=0.334 Sum_probs=22.9
Q ss_pred CCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 390 QSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 390 qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
....++++ .+|..+++--....|..||..++
T Consensus 247 ~v~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 247 KVNGLCFT-SDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEETTTC
T ss_pred ceeEEEEc-CCCCEEEEecCCCeEEEEECCCC
Confidence 34567888 57776666667788999998764
No 184
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.07 E-value=8.3 Score=42.15 Aligned_cols=107 Identities=9% Similarity=0.097 Sum_probs=58.1
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCC---------CCceeEEEeeCCCc-c
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTR---------DNFRVMYFHPLAST-T 356 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~---------~g~r~LYf~plss~-~ 356 (494)
.+..|.+||+.++..... ....+ ....+..++.+|... .+++.|+.....+. +
T Consensus 121 ~dg~I~vwdl~~~~~~~~-------------~~~~~----~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~ 183 (753)
T 3jro_A 121 SDGKVSVVEFKENGTTSP-------------IIIDA----HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVK 183 (753)
T ss_dssp TTSEEEEEECCSSSCCCC-------------EEEEC----CSSCEEEEEECCCC---------CGGGCCEEEEETTSCEE
T ss_pred CCCcEEEEEeecCCCcce-------------eEeec----CCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEE
Confidence 456788999987632111 01111 123466677776310 01356777666665 7
Q ss_pred eEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCC--CeEEEeccCCCeEEEEeCCCC
Q psy731 357 EFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEET--GVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 357 ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~--G~ly~~~~~~~aI~~w~~~~~ 421 (494)
+|.+.+..- . ........+.. .....+++.|.. |.++++--....|..||..++
T Consensus 184 iwd~~~~~~------~--~~~~~~~~~h~---~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 184 IWKYNSDAQ------T--YVLESTLEGHS---DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEEETTTT------E--EEEEEEECCCS---SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EEeccCCcc------c--ceeeeeecCCC---CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 777654310 0 00001112222 345677888432 888888888889999999873
No 185
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=93.04 E-value=15 Score=41.72 Aligned_cols=54 Identities=13% Similarity=0.060 Sum_probs=32.9
Q ss_pred CCeEEeeCCCCeEEEe-------------ccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCce-EEEE
Q psy731 391 SGASSLDEETGVIFYA-------------LLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGV-LWVL 456 (494)
Q Consensus 391 s~g~~~D~~~G~ly~~-------------~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~-Lwvl 456 (494)
..++++. .+|.+|+. .-....|..||..+++ ...+. .-+..+.+.+||. |++.
T Consensus 559 ~~~~~~s-~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~------~~~l~------~~v~~~~~S~DG~~l~~~ 625 (1045)
T 1k32_A 559 YRMIIPL-ESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK------VTEVK------NNLTDLRLSADRKTVMVR 625 (1045)
T ss_dssp EEEEEEC-SSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC------EEEEE------EEEEEEEECTTSCEEEEE
T ss_pred hhheEEc-CCCeEEEEecccCcccccccccCCCceEEEEECCCCc------EEEee------cCcceEEECCCCCEEEEE
Confidence 3466777 68876763 2235689999988731 23333 2244667888884 5544
Q ss_pred e
Q psy731 457 S 457 (494)
Q Consensus 457 s 457 (494)
+
T Consensus 626 ~ 626 (1045)
T 1k32_A 626 K 626 (1045)
T ss_dssp E
T ss_pred c
Confidence 4
No 186
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=92.99 E-value=6 Score=37.11 Aligned_cols=201 Identities=9% Similarity=0.056 Sum_probs=107.4
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+.=.... .|..||+.+++.++++.-.. ..+..+.+. .+..+++. =
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~--------~i~vwd~~~~~~~~~~~~~~-------~~v~~~~~~-----~~~~~l~s-~ 125 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDK--------TLKIWDVSSGKCLKTLKGHS-------NYVFCCNFN-----PQSNLIVS-G 125 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTS--------EEEEEETTTCCEEEEEECCS-------SCEEEEEEC-----SSSSEEEE-E
T ss_pred ceEEEEEcCCCCEEEEECCCC--------EEEEEECCCCcEEEEEcCCC-------CCEEEEEEc-----CCCCEEEE-E
Confidence 456677777776655432222 68889999999888765332 223333332 13344433 3
Q ss_pred CCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 208 SGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
+..+.|.+||+.+++.-+. ..+ ......+.+.. +..+++...
T Consensus 126 ~~d~~i~iwd~~~~~~~~~~~~~-------------------------------~~~v~~~~~~~-----~~~~l~~~~- 168 (312)
T 4ery_A 126 SFDESVRIWDVKTGKCLKTLPAH-------------------------------SDPVSAVHFNR-----DGSLIVSSS- 168 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCC-------------------------------SSCEEEEEECT-----TSSEEEEEE-
T ss_pred eCCCcEEEEECCCCEEEEEecCC-------------------------------CCcEEEEEEcC-----CCCEEEEEe-
Confidence 4456799999998875433 110 01122333321 233444443
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||+++++.-+..... . ...+..++++|+ ++.|......+. ++|.+.+..+
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~---~---------------~~~~~~~~~~~~----~~~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDD---D---------------NPPVSFVKFSPN----GKYILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCS---S---------------CCCEEEEEECTT----SSEEEEEETTTEEEEEETTTTEE
T ss_pred CCCcEEEEECCCCceeeEEecc---C---------------CCceEEEEECCC----CCEEEEEcCCCeEEEEECCCCcE
Confidence 3567889999887643322110 0 012556888886 356766665554 5555433211
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.....|..+. .........+..|.++++--....|..||..++
T Consensus 227 ------------~~~~~~~~~~-~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 227 ------------LKTYTGHKNE-KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp ------------EEEECSSCCS-SSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred ------------EEEEEecCCc-eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 0111222211 111222333356777777778889999999873
No 187
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.92 E-value=7.1 Score=37.77 Aligned_cols=107 Identities=8% Similarity=0.021 Sum_probs=59.4
Q ss_pred CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC----CcceEeee
Q psy731 286 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA----STTEFAVT 361 (494)
Q Consensus 286 ~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls----s~~ly~V~ 361 (494)
..+..|.+||+++++.-+........ .| ....+..++++|++ ...|...... .-++|.+.
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~~~~~~---------~~----~~~~v~~~~~~~~~---~~~l~~~~~d~~~~~i~~~d~~ 248 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLSYTSPN---------SG----IKQQLSVVEWHPKN---STRVATATGSDNDPSILIWDLR 248 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEECCCCCS---------SC----CCCCEEEEEECSSC---TTEEEEEECCSSSCCCCEEETT
T ss_pred cCCCCEEEEECCCCCcceEEeccccc---------cc----cCCceEEEEECCCC---CCEEEEEECCCCCceEEEEeCC
Confidence 34567999999987654332211000 00 02347789999862 3455555554 23666654
Q ss_pred chhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 362 TKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 362 T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
+... . ...++ .+.. .....+++.|..|.++++--....|..||..++
T Consensus 249 ~~~~---~------~~~~~-~~~~---~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 249 NANT---P------LQTLN-QGHQ---KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp STTS---C------SBCCC-SCCS---SCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred CCCC---C------cEEee-cCcc---CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 4210 0 00010 0222 234567777447877777778889999998874
No 188
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.81 E-value=12 Score=40.04 Aligned_cols=201 Identities=12% Similarity=0.058 Sum_probs=104.2
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+-=.... .|..||+.+++.++++.-.. ..+..+.+. .++.++ +|=
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg--------~v~vwd~~~~~~~~~~~~h~-------~~v~~~~~s-----~~~~~l-~s~ 490 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDG--------ELRLWDLAAGVSTRRFVGHT-------KDVLSVAFS-----LDNRQI-VSA 490 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTS--------EEEEEETTTTEEEEEEECCS-------SCEEEEEEC-----TTSSCE-EEE
T ss_pred cEEEEEECCCCCEEEEEeCCC--------cEEEEECCCCcceeEEeCCC-------CCEEEEEEe-----CCCCEE-EEE
Confidence 355666667776555321111 78899999999888765322 223333332 122333 344
Q ss_pred CCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC
Q psy731 208 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG 287 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~ 287 (494)
+..+.|.+||........+..... +| ......+.+.. +..... .++=..
T Consensus 491 s~D~~i~iwd~~~~~~~~~~~~~~---------------~h------------~~~v~~~~~~~---~~~~~~-l~s~s~ 539 (694)
T 3dm0_A 491 SRDRTIKLWNTLGECKYTISEGGE---------------GH------------RDWVSCVRFSP---NTLQPT-IVSASW 539 (694)
T ss_dssp ETTSCEEEECTTSCEEEEECSSTT---------------SC------------SSCEEEEEECS---CSSSCE-EEEEET
T ss_pred eCCCEEEEEECCCCcceeeccCCC---------------CC------------CCcEEEEEEeC---CCCcce-EEEEeC
Confidence 456789999987766555521000 00 01122222221 111112 223334
Q ss_pred CCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhc
Q psy731 288 HNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQ 366 (494)
Q Consensus 288 ~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~ 366 (494)
+..|.+||+.+++..+..... ...+..++++|++ +.|.-....+. ++|.+.+...
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h-------------------~~~v~~v~~spdg----~~l~sg~~Dg~i~iwd~~~~~~- 595 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGH-------------------TGYVSTVAVSPDG----SLCASGGKDGVVLLWDLAEGKK- 595 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCC-------------------SSCEEEEEECTTS----SEEEEEETTSBCEEEETTTTEE-
T ss_pred CCeEEEEECCCCcEEEEEcCC-------------------CCCEEEEEEeCCC----CEEEEEeCCCeEEEEECCCCce-
Confidence 667899999887654432110 1236778998862 55665555443 6666543211
Q ss_pred CCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 367 NRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 367 ~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
+..+.. ......+++. .+|.+..+- ..+.|..||..++
T Consensus 596 ------------~~~~~~---~~~v~~~~~s-p~~~~l~~~-~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 596 ------------LYSLEA---NSVIHALCFS-PNRYWLCAA-TEHGIKIWDLESK 633 (694)
T ss_dssp ------------EECCBC---SSCEEEEEEC-SSSSEEEEE-ETTEEEEEETTTT
T ss_pred ------------EEEecC---CCcEEEEEEc-CCCcEEEEE-cCCCEEEEECCCC
Confidence 000111 1234566777 566655443 4577999999874
No 189
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.53 E-value=7.8 Score=37.23 Aligned_cols=72 Identities=8% Similarity=-0.000 Sum_probs=41.4
Q ss_pred cceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEec
Q psy731 329 TGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYAL 407 (494)
Q Consensus 329 ~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~ 407 (494)
..+..|+++|+ ++.|+.....+. ++|.+.+..+ .....+.. .....+++. .+| ++++-
T Consensus 248 ~~i~~~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~------------~~~~~~~~---~~i~~~~~~-~~~-~l~~~ 306 (425)
T 1r5m_A 248 GPISVLEFNDT----NKLLLSASDDGTLRIWHGGNGNS------------QNCFYGHS---QSIVSASWV-GDD-KVISC 306 (425)
T ss_dssp SCEEEEEEETT----TTEEEEEETTSCEEEECSSSBSC------------SEEECCCS---SCEEEEEEE-TTT-EEEEE
T ss_pred CceEEEEECCC----CCEEEEEcCCCEEEEEECCCCcc------------ceEecCCC---ccEEEEEEC-CCC-EEEEE
Confidence 34677888875 246665554443 4444332111 11111222 335667888 567 66666
Q ss_pred cCCCeEEEEeCCCC
Q psy731 408 LVKSGVGCWNTFRG 421 (494)
Q Consensus 408 ~~~~aI~~w~~~~~ 421 (494)
-....|..||..++
T Consensus 307 ~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 307 SMDGSVRLWSLKQN 320 (425)
T ss_dssp ETTSEEEEEETTTT
T ss_pred eCCCcEEEEECCCC
Confidence 77889999999774
No 190
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.18 E-value=10 Score=37.77 Aligned_cols=30 Identities=7% Similarity=0.113 Sum_probs=23.5
Q ss_pred CCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 391 SGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 391 s~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
..+++++ .+|..+++--....|.+||..++
T Consensus 341 v~~v~~~-~~g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 341 VRGVLFH-SGGKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp EEEEEEC-SSSSCEEEEETTTEEEEECCTTS
T ss_pred EEEEEEc-CCCCEEEEEeCCCeEEEEECCCC
Confidence 4577888 67877777777889999999764
No 191
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.05 E-value=9.4 Score=37.13 Aligned_cols=68 Identities=9% Similarity=0.115 Sum_probs=48.9
Q ss_pred CCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEE
Q psy731 136 PCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVV 215 (494)
Q Consensus 136 ~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIV 215 (494)
..++||+..... .|.++|.+|++++-++.++.. ....++++ ++.+|+.- ..+.|+.
T Consensus 102 ~~~~v~v~~~~g---------~l~a~d~~tG~~~W~~~~~~~-------~~~~p~~~-------~~~v~v~~-~~g~l~~ 157 (376)
T 3q7m_A 102 SGGHVYIGSEKA---------QVYALNTSDGTVAWQTKVAGE-------ALSRPVVS-------DGLVLIHT-SNGQLQA 157 (376)
T ss_dssp ETTEEEEEETTS---------EEEEEETTTCCEEEEEECSSC-------CCSCCEEE-------TTEEEEEC-TTSEEEE
T ss_pred eCCEEEEEcCCC---------EEEEEECCCCCEEEEEeCCCc-------eEcCCEEE-------CCEEEEEc-CCCeEEE
Confidence 468999975432 799999999999988887752 22334443 46788864 3468999
Q ss_pred EEccCCc-eeEEe
Q psy731 216 YNYRTND-SHIIH 227 (494)
Q Consensus 216 yd~~~~~-~~rv~ 227 (494)
+|.++|+ .|+..
T Consensus 158 ~d~~tG~~~W~~~ 170 (376)
T 3q7m_A 158 LNEADGAVKWTVN 170 (376)
T ss_dssp EETTTCCEEEEEE
T ss_pred EECCCCcEEEEEe
Confidence 9998886 57773
No 192
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=92.00 E-value=3.6 Score=46.73 Aligned_cols=130 Identities=12% Similarity=0.136 Sum_probs=72.0
Q ss_pred CcEEEEecCCCCeEE-EEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcc
Q psy731 278 DAFLYIADSGHNHIV-VYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTT 356 (494)
Q Consensus 278 ~~~~YI~D~~~~gli-Vydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ 356 (494)
+.++|.+| ...|. +||+.+++..++..+. ..+..+++||+ +++|++..-.+ .
T Consensus 349 ~~l~~~s~--~~~l~~~~d~~~~~~~~l~~~~--------------------~~~~~~~~SpD----G~~la~~~~~~-~ 401 (1045)
T 1k32_A 349 VAFIHGTR--EGDFLGIYDYRTGKAEKFEENL--------------------GNVFAMGVDRN----GKFAVVANDRF-E 401 (1045)
T ss_dssp EEEEEEET--TEEEEEEEETTTCCEEECCCCC--------------------CSEEEEEECTT----SSEEEEEETTS-E
T ss_pred CeEEEEEC--CCceEEEEECCCCCceEecCCc--------------------cceeeeEECCC----CCEEEEECCCC-e
Confidence 45777777 66888 9999887655443110 12566899997 37888765443 4
Q ss_pred eEeeechhhcCCCcCccccccceEEe-cccCCCCCCCeEEeeCCCCe-EEEeccCC---------CeEEEEeCCCCcccc
Q psy731 357 EFAVTTKVLQNRSLDFSRSNFDFKVM-GSRGTGSQSGASSLDEETGV-IFYALLVK---------SGVGCWNTFRGEEYN 425 (494)
Q Consensus 357 ly~V~T~~L~~~~~~~~~~~~~v~~~-G~~G~~~qs~g~~~D~~~G~-ly~~~~~~---------~aI~~w~~~~~~~~~ 425 (494)
++.+..+ ... ..+.. +.. .....++.. .+|. |.++.... ..|..||..+|.
T Consensus 402 v~~~d~~---tg~--------~~~~~~~~~---~~v~~~~~S-pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--- 463 (1045)
T 1k32_A 402 IMTVDLE---TGK--------PTVIERSRE---AMITDFTIS-DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--- 463 (1045)
T ss_dssp EEEEETT---TCC--------EEEEEECSS---SCCCCEEEC-TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---
T ss_pred EEEEECC---CCc--------eEEeccCCC---CCccceEEC-CCCCeEEEEecCccccccCCCCCeEEEEECCCCc---
Confidence 4444321 111 11111 222 233567888 4664 55554432 589999998742
Q ss_pred ccceeeeeecCCeEecccceEEcCCc-eEEEEec
Q psy731 426 EKSMGLVAEDNATLIYPSDIRVDRTG-VLWVLSN 458 (494)
Q Consensus 426 ~~~~~~v~~d~~~l~~pd~~~id~~g-~Lwvlsn 458 (494)
...+... ...+..+.+.++| .||+.++
T Consensus 464 ---~~~l~~~---~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 464 ---IFAATTE---NSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp ---EEECSCS---SSBEEEEEECTTSCEEEEEES
T ss_pred ---EEEeeCC---CcccCCceEcCCCCEEEEEec
Confidence 1222211 1123345667777 4777775
No 193
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=91.85 E-value=9.4 Score=36.69 Aligned_cols=173 Identities=10% Similarity=0.115 Sum_probs=95.1
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE-ecCccccCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDP 235 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv-~~~~~~~dp 235 (494)
++..||+.+++...++.-.. ..+..+.+. .+..++... +..+.|.+||+.+++.-+. ..+.
T Consensus 145 ~v~i~~~~~~~~~~~~~~~~-------~~v~~~~~s-----pdg~~lasg-~~dg~i~iwd~~~~~~~~~~~~h~----- 206 (321)
T 3ow8_A 145 KVNIFGVESGKKEYSLDTRG-------KFILSIAYS-----PDGKYLASG-AIDGIINIFDIATGKLLHTLEGHA----- 206 (321)
T ss_dssp EEEEEETTTCSEEEEEECSS-------SCEEEEEEC-----TTSSEEEEE-ETTSCEEEEETTTTEEEEEECCCS-----
T ss_pred cEEEEEcCCCceeEEecCCC-------ceEEEEEEC-----CCCCEEEEE-cCCCeEEEEECCCCcEEEEEcccC-----
Confidence 67888998888776554332 233334332 133444433 3456799999998876443 1110
Q ss_pred CCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCC
Q psy731 236 LFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLF 315 (494)
Q Consensus 236 ~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~ 315 (494)
.....+.+.. +..++... ..+..|.+||+++++.-+...
T Consensus 207 --------------------------~~v~~l~~sp-----d~~~l~s~-s~dg~i~iwd~~~~~~~~~~~--------- 245 (321)
T 3ow8_A 207 --------------------------MPIRSLTFSP-----DSQLLVTA-SDDGYIKIYDVQHANLAGTLS--------- 245 (321)
T ss_dssp --------------------------SCCCEEEECT-----TSCEEEEE-CTTSCEEEEETTTCCEEEEEC---------
T ss_pred --------------------------CceeEEEEcC-----CCCEEEEE-cCCCeEEEEECCCcceeEEEc---------
Confidence 1123344431 23333333 345668899998765432211
Q ss_pred cceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeE
Q psy731 316 GDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGAS 394 (494)
Q Consensus 316 ~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~ 394 (494)
| -...+..++++|++ +.|.-....++ ++|.+.+..+ ..+..+.. ....++
T Consensus 246 ------~----h~~~v~~~~~sp~~----~~l~s~s~D~~v~iwd~~~~~~------------~~~~~~h~---~~v~~v 296 (321)
T 3ow8_A 246 ------G----HASWVLNVAFCPDD----THFVSSSSDKSVKVWDVGTRTC------------VHTFFDHQ---DQVWGV 296 (321)
T ss_dssp ------C----CSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTTEE------------EEEECCCS---SCEEEE
T ss_pred ------C----CCCceEEEEECCCC----CEEEEEeCCCcEEEEeCCCCEE------------EEEEcCCC---CcEEEE
Confidence 0 01236779999862 56666655554 6666543211 01112322 234567
Q ss_pred EeeCCCCeEEEeccCCCeEEEEeC
Q psy731 395 SLDEETGVIFYALLVKSGVGCWNT 418 (494)
Q Consensus 395 ~~D~~~G~ly~~~~~~~aI~~w~~ 418 (494)
++. .+|...++--....|..||.
T Consensus 297 ~~s-~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 297 KYN-GNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEC-TTSSEEEEEETTCCEEEEEC
T ss_pred EEC-CCCCEEEEEeCCCeEEEEeC
Confidence 787 67776777777788889984
No 194
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.76 E-value=6.1 Score=41.15 Aligned_cols=102 Identities=7% Similarity=0.014 Sum_probs=53.9
Q ss_pred CcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCC---
Q psy731 278 DAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAS--- 354 (494)
Q Consensus 278 ~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss--- 354 (494)
+..+|++... .++.+||+++++..++.... + ..++.||++ ++|+|..-.+
T Consensus 122 ~~~~~~s~~~-~~~~l~d~~~g~~~~l~~~~---------------------~-~~~~~spDG----~~la~~~~~~~~~ 174 (582)
T 3o4h_A 122 EAVVFTGATE-DRVALYALDGGGLRELARLP---------------------G-FGFVSDIRG----DLIAGLGFFGGGR 174 (582)
T ss_dssp SCEEEEEECS-SCEEEEEEETTEEEEEEEES---------------------S-CEEEEEEET----TEEEEEEEEETTE
T ss_pred CeEEEEecCC-CCceEEEccCCcEEEeecCC---------------------C-ceEEECCCC----CEEEEEEEcCCCC
Confidence 4566666543 45669999988766665311 1 347788873 6777644321
Q ss_pred cceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCe-EEEeccCC-CeEEEEeCCCC
Q psy731 355 TTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGV-IFYALLVK-SGVGCWNTFRG 421 (494)
Q Consensus 355 ~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~-ly~~~~~~-~aI~~w~~~~~ 421 (494)
..+|.++.+ ... ..++.+.. ......+.. .+|. |+.++-.. ..|..||.++|
T Consensus 175 ~~i~~~d~~---~g~--------~~~l~~~~---~~~~~~~~S-pDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 175 VSLFTSNLS---SGG--------LRVFDSGE---GSFSSASIS-PGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp EEEEEEETT---TCC--------CEEECCSS---CEEEEEEEC-TTSCEEEEEECSSCEEEEEECTTTC
T ss_pred eEEEEEcCC---CCC--------ceEeecCC---CccccceEC-CCCCEEEEccCCCeeEEEEEcCCCC
Confidence 245555421 111 01112222 123456777 4664 44333222 27999999874
No 195
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.45 E-value=3.8 Score=41.13 Aligned_cols=126 Identities=10% Similarity=0.158 Sum_probs=65.5
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCc--eeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCC
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTND--SHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANC 276 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~--~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c 276 (494)
...+++++=+..+.|.+||+++.. ...+..| ......+.+..
T Consensus 288 ~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h-------------------------------~~~v~~i~~sp----- 331 (430)
T 2xyi_A 288 YSEFILATGSADKTVALWDLRNLKLKLHSFESH-------------------------------KDEIFQVQWSP----- 331 (430)
T ss_dssp SCTTEEEEEETTSEEEEEETTCTTSCSEEEECC-------------------------------SSCEEEEEECS-----
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC-------------------------------CCCEEEEEECC-----
Confidence 455677777777889999998743 2222110 11233344432
Q ss_pred CCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEE-eeCCCc
Q psy731 277 DDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYF-HPLAST 355 (494)
Q Consensus 277 ~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf-~plss~ 355 (494)
++.+++++-..+..|.|||+.....-..... ....|....+...|. ...+..++.+|++ ++++. ..-.+.
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~h----~~~v~~~~~~p~~----~~~l~s~s~dg~ 402 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTED-AEDGPPELLFIHGGH----TAKISDFSWNPNE----PWIICSVSEDNI 402 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHH-HHHCCTTEEEECCCC----SSCEEEEEECSSS----TTEEEEEETTSE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccc-cccCCcceEEEcCCC----CCCceEEEECCCC----CCEEEEEECCCC
Confidence 2334555555677899999986321000000 000000111111111 2347889999863 44444 555554
Q ss_pred -ceEeeechhhcCCC
Q psy731 356 -TEFAVTTKVLQNRS 369 (494)
Q Consensus 356 -~ly~V~T~~L~~~~ 369 (494)
++|.++...+.++.
T Consensus 403 i~iw~~~~~~~~~~~ 417 (430)
T 2xyi_A 403 MQVWQMAENVYNDEE 417 (430)
T ss_dssp EEEEEECHHHHCC--
T ss_pred EEEeEcccccccCCC
Confidence 89999999987654
No 196
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.24 E-value=11 Score=36.18 Aligned_cols=19 Identities=11% Similarity=0.244 Sum_probs=14.6
Q ss_pred CCCCeEEEEEccCCceeEE
Q psy731 208 SGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv 226 (494)
.....|.++|+.++...++
T Consensus 165 ~~~~~l~~~d~~~g~~~~~ 183 (396)
T 3c5m_A 165 NPTCRLIKVDIETGELEVI 183 (396)
T ss_dssp CCCEEEEEEETTTCCEEEE
T ss_pred CCcceEEEEECCCCcEEee
Confidence 3456788999988887776
No 197
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.06 E-value=13 Score=36.91 Aligned_cols=77 Identities=14% Similarity=0.182 Sum_probs=45.9
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
-.|..+...+.+.+.+-=.... .|.+||+.+++.++++.-.. ..+.++.+. .++...+|
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg--------~i~vwd~~~~~~~~~l~~h~-------~~V~~v~~~------~~~~~l~s 167 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDA--------TIKVWDYETGDFERTLKGHT-------DSVQDISFD------HSGKLLAS 167 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSS--------CEEEEETTTCCCCEEECCCS-------SCEEEEEEC------TTSSEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCcEEEEEeccC-------CcEEEEEEc------CCCCEEEE
Confidence 3566667777666554322222 68889999998887664322 234444442 12223445
Q ss_pred eCCCCeEEEEEccCCcee
Q psy731 207 DSGHNHIVVYNYRTNDSH 224 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~ 224 (494)
=+..+.|.+||+.++..-
T Consensus 168 gs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 168 CSADMTIKLWDFQGFECI 185 (410)
T ss_dssp EETTSCCCEEETTSSCEE
T ss_pred EeCCCeEEEEeCCCCcee
Confidence 456678999999877653
No 198
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.82 E-value=13 Score=36.45 Aligned_cols=30 Identities=7% Similarity=0.042 Sum_probs=22.0
Q ss_pred CCCeEEeeCCCCeEEEe--ccCCCeEEEEeCCC
Q psy731 390 QSGASSLDEETGVIFYA--LLVKSGVGCWNTFR 420 (494)
Q Consensus 390 qs~g~~~D~~~G~ly~~--~~~~~aI~~w~~~~ 420 (494)
+...+++. .+|..+++ --..+.|..|+..+
T Consensus 305 ~v~~~~~s-~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 305 QVTSLIWS-PHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp CEEEEEEC-SSSSEEEEEECTTTCEEEEEEEET
T ss_pred cEEEEEEC-CCCCeEEEEeecCCCcEEEEecCC
Confidence 45677888 56766665 33788999999876
No 199
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=90.61 E-value=11 Score=35.23 Aligned_cols=198 Identities=8% Similarity=0.097 Sum_probs=108.5
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
..|..+...+++++.+.=.... .|..||+.+++..+.+.-. ...+..+... .+..++..+
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg--------~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~-----~~~~~l~s~ 83 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADK--------LIKIWGAYDGKFEKTISGH-------KLGISDVAWS-----SDSNLLVSA 83 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEEECCC-------SSCEEEEEEC-----TTSSEEEEE
T ss_pred CcEEEEEECCCCCEEEEeeCCC--------eEEEEeCCCcccchhhccC-------CCceEEEEEc-----CCCCEEEEE
Confidence 3566777778777655422222 5888999999888765422 2234444442 123344333
Q ss_pred eCCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEec
Q psy731 207 DSGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIAD 285 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D 285 (494)
+..+.|.+||+.+++.-+. ..+. .....+.+.. +..+++...
T Consensus 84 -~~d~~i~vwd~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~-----~~~~l~s~~ 126 (312)
T 4ery_A 84 -SDDKTLKIWDVSSGKCLKTLKGHS-------------------------------NYVFCCNFNP-----QSNLIVSGS 126 (312)
T ss_dssp -ETTSEEEEEETTTCCEEEEEECCS-------------------------------SCEEEEEECS-----SSSEEEEEE
T ss_pred -CCCCEEEEEECCCCcEEEEEcCCC-------------------------------CCEEEEEEcC-----CCCEEEEEe
Confidence 4457899999998875433 1110 1122222321 233433332
Q ss_pred CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechh
Q psy731 286 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKV 364 (494)
Q Consensus 286 ~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~ 364 (494)
.+..|.+||+++++.-+..... ...+..++++|+ ++.|+.....+. ++|.+.+..
T Consensus 127 -~d~~i~iwd~~~~~~~~~~~~~-------------------~~~v~~~~~~~~----~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 127 -FDESVRIWDVKTGKCLKTLPAH-------------------SDPVSAVHFNRD----GSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp -TTSCEEEEETTTCCEEEEECCC-------------------SSCEEEEEECTT----SSEEEEEETTSCEEEEETTTCC
T ss_pred -CCCcEEEEECCCCEEEEEecCC-------------------CCcEEEEEEcCC----CCEEEEEeCCCcEEEEECCCCc
Confidence 3557889999887643322110 123667888875 246665555543 555443211
Q ss_pred hcCCCcCccccccceEEe-cccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 365 LQNRSLDFSRSNFDFKVM-GSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~-G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
. ++.+ ... ......++++ .+|..+++--..+.|..||..++
T Consensus 183 ~-------------~~~~~~~~--~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 183 C-------------LKTLIDDD--NPPVSFVKFS-PNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp E-------------EEEECCSS--CCCEEEEEEC-TTSSEEEEEETTTEEEEEETTTT
T ss_pred e-------------eeEEeccC--CCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCC
Confidence 1 1111 111 1234557888 67777777777889999999874
No 200
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=90.35 E-value=13 Score=35.67 Aligned_cols=201 Identities=13% Similarity=0.124 Sum_probs=106.3
Q ss_pred eEEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 127 TSVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 127 vsV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
-.|..+...+++++.+-=.... .|..||+.+++.++.+.... +....+... .+..++...
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg--------~v~iWd~~~~~~~~~~~~~~-------~~v~~~~~s-----~~~~~l~s~ 115 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDG--------KLIIWDSYTTNKVHAIPLRS-------SWVMTCAYA-----PSGNYVACG 115 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTT--------EEEEEETTTCCEEEEEECSS-------SCEEEEEEC-----TTSSEEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCC--------cEEEEECCCCCcceEeecCC-------ccEEEEEEC-----CCCCEEEEE
Confidence 3456666667776555322211 78889999998888776544 222333321 133444333
Q ss_pred eCCCCeEEEEEccCCce-eEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEec
Q psy731 207 DSGHNHIVVYNYRTNDS-HIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIAD 285 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~-~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D 285 (494)
+..+.+.+||+.++.. .++.. ++ .........+.... +.. .++=
T Consensus 116 -~~d~~v~iw~~~~~~~~~~~~~----------------------~~-----~~h~~~v~~~~~~~------~~~-l~s~ 160 (340)
T 1got_B 116 -GLDNICSIYNLKTREGNVRVSR----------------------EL-----AGHTGYLSCCRFLD------DNQ-IVTS 160 (340)
T ss_dssp -ETTCEEEEEETTTCSBSCEEEE----------------------EE-----ECCSSCEEEEEEEE------TTE-EEEE
T ss_pred -eCCCeEEEEECccCCCcceeEE----------------------Ee-----cCCCccEEEEEECC------CCc-EEEE
Confidence 3457789999887642 11100 00 00001112222211 122 2333
Q ss_pred CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechh
Q psy731 286 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKV 364 (494)
Q Consensus 286 ~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~ 364 (494)
..+..|.+||+++++.-+.... -...+..++++|++ +.|.-....+. ++|.+.+..
T Consensus 161 s~d~~i~~wd~~~~~~~~~~~~-------------------h~~~v~~~~~~~~~----~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 161 SGDTTCALWDIETGQQTTTFTG-------------------HTGDVMSLSLAPDT----RLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECC-------------------CSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCS
T ss_pred ECCCcEEEEECCCCcEEEEEcC-------------------CCCceEEEEECCCC----CEEEEEeCCCcEEEEECCCCe
Confidence 3467789999988764332110 01236778898862 45554444443 566543321
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
. .....|.. .....+++. .+|.++++--....|..||.+.+
T Consensus 218 ~------------~~~~~~h~---~~v~~v~~~-p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 218 C------------RQTFTGHE---SDINAICFF-PNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp E------------EEEECCCS---SCEEEEEEC-TTSSEEEEEETTSCEEEEETTTT
T ss_pred e------------EEEEcCCc---CCEEEEEEc-CCCCEEEEEcCCCcEEEEECCCC
Confidence 1 01112222 335577888 67888888788889999999863
No 201
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=90.29 E-value=17 Score=37.01 Aligned_cols=80 Identities=8% Similarity=0.050 Sum_probs=49.3
Q ss_pred ceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCC---CCeEEEe
Q psy731 330 GIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEE---TGVIFYA 406 (494)
Q Consensus 330 Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~---~G~ly~~ 406 (494)
.+-|+++.+. ...||+.-=. ..++++..+-=...+ ...+..++..+......||++.+. +|-||.+
T Consensus 181 q~EgcvvDd~----~g~Lyv~eEd-~GIw~~da~p~~~~~------~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS 249 (355)
T 3amr_A 181 QTEGMAADDE----YGRLYIAEED-EAIWKFSAEPDGGSN------GTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS 249 (355)
T ss_dssp CEEEEEEETT----TTEEEEEETT-TEEEEEECSTTSCSC------CEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE
T ss_pred CcceEEEcCC----CCeEEEeccc-ceEEEEeCCcCCCCC------ceEEEEecCCccccCcceEEEEecCCCCEEEEEE
Confidence 3667999764 4699996655 358888643211000 122333332222234678888522 3679999
Q ss_pred ccCCCeEEEEeCCC
Q psy731 407 LLVKSGVGCWNTFR 420 (494)
Q Consensus 407 ~~~~~aI~~w~~~~ 420 (494)
.-..++...++.+.
T Consensus 250 sQG~~s~~Vydr~~ 263 (355)
T 3amr_A 250 SQGNSSYAIYDRQG 263 (355)
T ss_dssp EGGGTEEEEEESST
T ss_pred cCCCCEEEEEECCC
Confidence 99999999999864
No 202
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=90.21 E-value=12 Score=39.70 Aligned_cols=26 Identities=12% Similarity=0.192 Sum_probs=20.8
Q ss_pred CcEEEEecCCCCeEEEEEcCCCcEEEEec
Q psy731 278 DAFLYIADSGHNHIVVYNYRTNDSHIIHH 306 (494)
Q Consensus 278 ~~~~YI~D~~~~gliVydl~~~~swrv~~ 306 (494)
+..||..+ ..|.++|+.+++..++..
T Consensus 126 ~~la~~~~---~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 126 QQLIFIFE---NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp TCEEEEET---TEEEEESSSSSCCEEEEC
T ss_pred CEEEEEEC---CeEEEEECCCCceEEEec
Confidence 56788876 579999999988877764
No 203
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=90.11 E-value=15 Score=35.95 Aligned_cols=190 Identities=11% Similarity=0.124 Sum_probs=99.4
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCC-ceeEE-ecCccccC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTN-DSHII-HHNYLHFD 234 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~-~~~rv-~~~~~~~d 234 (494)
.|..||+.+++.+..+.... ..........+.+ ...+....+|=+..+.|.+||++.. ...+. ..|
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~--~~~h~~~v~~~~~-----~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h----- 248 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEF--PSGHTADVLSLSI-----NSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH----- 248 (380)
T ss_dssp CEEEECTTTCCEEEEECCCS--SSSCCSCEEEEEE-----CSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC-----
T ss_pred cEEEEEcCCCcEEEEeeccc--CCCCccCeEEEEe-----ecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc-----
Confidence 57789999999887664322 0011122222222 1224556667667788999998743 33222 111
Q ss_pred CCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCC
Q psy731 235 PLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPL 314 (494)
Q Consensus 235 p~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~ 314 (494)
......+.+.. +..+ .++=..+..|.+||+++++.-+...........
T Consensus 249 --------------------------~~~v~~v~~~p-----~~~~-l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 249 --------------------------EGDINSVKFFP-----DGQR-FGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp --------------------------SSCCCEEEECT-----TSSE-EEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred --------------------------CCCeEEEEEec-----CCCe-EEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 01123333321 1222 333345677899999998766554321110000
Q ss_pred CcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecc--cCCCCCC
Q psy731 315 FGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGS--RGTGSQS 391 (494)
Q Consensus 315 ~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~--~G~~~qs 391 (494)
....+..++++|++ +.|+-....+. ++|.+.+.. .+..++. .|-....
T Consensus 297 ------------~~~~v~~~~~s~~g----~~l~~g~~dg~i~vwd~~~~~-------------~~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 297 ------------ELPIVTSVAFSISG----RLLFAGYSNGDCYVWDTLLAE-------------MVLNLGTLQNSHEGRI 347 (380)
T ss_dssp ------------SSCSCSEEEECSSS----SEEEEECTTSCEEEEETTTCC-------------EEEEECCSCSSCCCCC
T ss_pred ------------ccCceEEEEECCCC----CEEEEEECCCCEEEEECCCCc-------------eEEEEecccCCCCCce
Confidence 01236678898863 56655544443 444332211 1111211 1112335
Q ss_pred CeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 392 GASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 392 ~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
..+++. .+|..+++--....|..|+..+
T Consensus 348 ~~l~~s-~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 348 SCLGLS-SDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CEEEEC-SSSSEEEEECTTSCEEEEECCS
T ss_pred EEEEEC-CCCCEEEEeeCCCCEEEEecCC
Confidence 667888 6887777777888999999876
No 204
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.94 E-value=6.7 Score=40.86 Aligned_cols=22 Identities=5% Similarity=-0.071 Sum_probs=19.0
Q ss_pred eeCCCCeEEEeccCCCeEEEEeC
Q psy731 396 LDEETGVIFYALLVKSGVGCWNT 418 (494)
Q Consensus 396 ~D~~~G~ly~~~~~~~aI~~w~~ 418 (494)
.+ .+|.++++-.....+..|+.
T Consensus 253 ~s-pdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 253 YL-PDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EC-TTSCEEEEEEETTEEEEEET
T ss_pred Ec-CCCcEEEEEEcCCcEEEEEE
Confidence 77 57788998888889999998
No 205
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=89.55 E-value=23 Score=37.23 Aligned_cols=29 Identities=10% Similarity=0.076 Sum_probs=18.1
Q ss_pred CeEEeeCCCCeEEEeccCCC--eEEEEeCCCC
Q psy731 392 GASSLDEETGVIFYALLVKS--GVGCWNTFRG 421 (494)
Q Consensus 392 ~g~~~D~~~G~ly~~~~~~~--aI~~w~~~~~ 421 (494)
...+.. .+|.+||.--... .|..||..+|
T Consensus 245 ~~~~~s-pdg~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 245 AQAEWA-PDGSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp EEEEEC-TTSCEEEEECTTSSCEEEEECTTTC
T ss_pred cceEEC-CCCeEEEEECCCCCeEEEEEECCCC
Confidence 345666 5666666544333 7999998653
No 206
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.49 E-value=16 Score=35.45 Aligned_cols=125 Identities=10% Similarity=0.211 Sum_probs=67.9
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..+.+||+++++.-+.... -...|..++.+|++ +.|.-....++ ++|.+.+.
T Consensus 218 ~Dg~v~~wd~~~~~~~~~~~~-------------------h~~~v~~v~~~p~~----~~l~s~s~D~~v~lwd~~~~-- 272 (354)
T 2pbi_B 218 CDKKAMVWDMRSGQCVQAFET-------------------HESDVNSVRYYPSG----DAFASGSDDATCRLYDLRAD-- 272 (354)
T ss_dssp TTSCEEEEETTTCCEEEEECC-------------------CSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTT--
T ss_pred CCCeEEEEECCCCcEEEEecC-------------------CCCCeEEEEEeCCC----CEEEEEeCCCeEEEEECCCC--
Confidence 456789999998765333211 01237778888862 45555555444 56654331
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccce
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDI 445 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~ 445 (494)
..+..+...........+++. .+|.+.++--....|..||..+|.. +..+... . .+...+
T Consensus 273 -----------~~~~~~~~~~~~~~~~~~~~s-~~g~~l~~g~~d~~i~vwd~~~~~~-----~~~l~~h-~--~~v~~l 332 (354)
T 2pbi_B 273 -----------REVAIYSKESIIFGASSVDFS-LSGRLLFAGYNDYTINVWDVLKGSR-----VSILFGH-E--NRVSTL 332 (354)
T ss_dssp -----------EEEEEECCTTCCSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTCSE-----EEEECCC-S--SCEEEE
T ss_pred -----------cEEEEEcCCCcccceeEEEEe-CCCCEEEEEECCCcEEEEECCCCce-----EEEEECC-C--CcEEEE
Confidence 111112111101112356677 6787777777888999999876422 2232211 1 245566
Q ss_pred EEcCCceEEEE
Q psy731 446 RVDRTGVLWVL 456 (494)
Q Consensus 446 ~id~~g~Lwvl 456 (494)
.+.++|.+.++
T Consensus 333 ~~spdg~~l~s 343 (354)
T 2pbi_B 333 RVSPDGTAFCS 343 (354)
T ss_dssp EECTTSSCEEE
T ss_pred EECCCCCEEEE
Confidence 67677754443
No 207
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=88.56 E-value=18 Score=34.79 Aligned_cols=59 Identities=10% Similarity=0.174 Sum_probs=32.0
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
.|..||+.+. .++.+.-.. .....+..+.+.. +..+++.+ +..+.|.+||++....+.+
T Consensus 142 ~i~iwd~~~~-~~~~~~~~~----~~~~~v~~~~~~~-----~~~~l~~~-~~d~~i~i~d~~~~~~~~~ 200 (383)
T 3ei3_B 142 ATTLRDFSGS-VIQVFAKTD----SWDYWYCCVDVSV-----SRQMLATG-DSTGRLLLLGLDGHEIFKE 200 (383)
T ss_dssp EEEEEETTSC-EEEEEECCC----CSSCCEEEEEEET-----TTTEEEEE-ETTSEEEEEETTSCEEEEE
T ss_pred EEEEEECCCC-ceEEEeccC----CCCCCeEEEEECC-----CCCEEEEE-CCCCCEEEEECCCCEEEEe
Confidence 6788888864 344343222 1223344444431 34455444 3457899999965555444
No 208
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.18 E-value=10 Score=40.46 Aligned_cols=121 Identities=7% Similarity=0.048 Sum_probs=72.2
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEEC-CCCcEEEEEEcCCCccccc--c--CCccceEEEeecCCCCCcEEEEeeCCCC
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDL-RQQMQIRFFQLKEKTDYTE--E--SKFSNMVVDVTSANCDNAFLYIADSGHN 211 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl-~t~~vi~~~~lp~~~~~~~--~--S~l~d~vVD~~~~~c~~~~vYItDs~~~ 211 (494)
.++|++...... +|+++|+ .|++++-+++++......+ . ..-..++++ ++.||+... .+
T Consensus 62 ~g~vyv~~~~~~--------~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~v~~~-dg 125 (571)
T 2ad6_A 62 GDMMYVHSAFPN--------NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-------AGQIVKKQA-NG 125 (571)
T ss_dssp TTEEEEECSTTT--------CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-------TTEEEEECT-TS
T ss_pred CCEEEEEeCCCC--------EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE-------CCEEEEEeC-CC
Confidence 567777754222 6999999 9999998888765210000 0 011245553 568999853 46
Q ss_pred eEEEEEccCCc-eeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCC---
Q psy731 212 HIVVYNYRTND-SHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSG--- 287 (494)
Q Consensus 212 ~iIVyd~~~~~-~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~--- 287 (494)
.|+.+|.++|+ .|++.-... .. .+ ......+|. +..+|+....
T Consensus 126 ~l~alD~~tG~~~W~~~~~~~----~~-~~---------------------~~~~~P~v~-------~g~v~vg~~~~~~ 172 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEVCDP----KV-GS---------------------TLTQAPFVA-------KDTVLMGCSGAEL 172 (571)
T ss_dssp EEEEEETTTCCEEEEEECCCG----GG-TC---------------------BCCSCCEEE-------TTEEEEECBCGGG
T ss_pred EEEEEECCCCCEEEEecCCCC----Cc-cc---------------------eeccCCEEE-------CCEEEEEecCCcc
Confidence 79999998887 577731100 00 00 001122332 2457777543
Q ss_pred --CCeEEEEEcCCCc-EEEEec
Q psy731 288 --HNHIVVYNYRTND-SHIIHH 306 (494)
Q Consensus 288 --~~gliVydl~~~~-swrv~~ 306 (494)
...|..+|.++++ .|++..
T Consensus 173 ~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 173 GVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TCCCEEEEEETTTCCEEEEEES
T ss_pred CCCCEEEEEECCCCcEEEEEcc
Confidence 5679999998765 798864
No 209
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.14 E-value=22 Score=38.27 Aligned_cols=52 Identities=10% Similarity=0.045 Sum_probs=33.3
Q ss_pred CcEEEEecCCCC---eEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCC
Q psy731 278 DAFLYIADSGHN---HIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLA 353 (494)
Q Consensus 278 ~~~~YI~D~~~~---gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~pls 353 (494)
+..||..+..+. .|.|+|+++++..+..... ..+.+++.||| ++.|||....
T Consensus 137 ~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~--------------------~~~~~~~wspD----g~~l~~~~~~ 191 (710)
T 2xdw_A 137 EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER--------------------VKFSCMAWTHD----GKGMFYNAYP 191 (710)
T ss_dssp SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE--------------------ECSCCEEECTT----SSEEEEEECC
T ss_pred CEEEEEEcCCCCceEEEEEEECCCCCCCcccccC--------------------cccceEEEEeC----CCEEEEEEEC
Confidence 567788775543 7999999988764432110 01345888887 3788886654
No 210
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=87.93 E-value=32 Score=36.93 Aligned_cols=29 Identities=10% Similarity=-0.028 Sum_probs=22.7
Q ss_pred CCCcEEEEeeCCCC---eEEEEEccCCceeEE
Q psy731 198 CDNAFLYIADSGHN---HIVVYNYRTNDSHII 226 (494)
Q Consensus 198 c~~~~vYItDs~~~---~iIVyd~~~~~~~rv 226 (494)
+++..+|.+|.++. .|.|+|+++|...+.
T Consensus 135 Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~ 166 (710)
T 2xdw_A 135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPD 166 (710)
T ss_dssp TSSEEEEEEEETTCSCEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCcc
Confidence 46677888876554 899999999988765
No 211
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=87.83 E-value=20 Score=34.39 Aligned_cols=173 Identities=12% Similarity=0.160 Sum_probs=91.9
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE-ecCccccCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDP 235 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv-~~~~~~~dp 235 (494)
.|..||+.+++.++++.-. ...+..+.+. .++...++=+..+.|.+||+.++...+. ..|
T Consensus 165 ~i~~wd~~~~~~~~~~~~h-------~~~v~~~~~~------~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h------ 225 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGH-------TGDVMSLSLA------PDTRLFVSGACDASAKLWDVREGMCRQTFTGH------ 225 (340)
T ss_dssp CEEEEETTTTEEEEEECCC-------SSCEEEEEEC------TTSSEEEEEETTSCEEEEETTTCSEEEEECCC------
T ss_pred cEEEEECCCCcEEEEEcCC-------CCceEEEEEC------CCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC------
Confidence 5888999999988766422 2233334332 1233455656678899999998875443 110
Q ss_pred CCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEE-ecCCcccCCC
Q psy731 236 LFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDPL 314 (494)
Q Consensus 236 ~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv-~~~~~~~dP~ 314 (494)
......+.+.. +..++. +-..+..|.+||+++++.-.. .|..
T Consensus 226 -------------------------~~~v~~v~~~p-----~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~~~------ 268 (340)
T 1got_B 226 -------------------------ESDINAICFFP-----NGNAFA-TGSDDATCRLFDLRADQELMTYSHDN------ 268 (340)
T ss_dssp -------------------------SSCEEEEEECT-----TSSEEE-EEETTSCEEEEETTTTEEEEEECCTT------
T ss_pred -------------------------cCCEEEEEEcC-----CCCEEE-EEcCCCcEEEEECCCCcEEEEEccCC------
Confidence 11233344432 123332 323456788999987764322 2211
Q ss_pred CcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCe
Q psy731 315 FGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGA 393 (494)
Q Consensus 315 ~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g 393 (494)
...++..++++|++ +.|.-..-.+. ++|.+.+... .-...|.. .....
T Consensus 269 ------------~~~~v~~~~~s~~g----~~l~~g~~d~~i~vwd~~~~~~------------~~~~~~h~---~~v~~ 317 (340)
T 1got_B 269 ------------IICGITSVSFSKSG----RLLLAGYDDFNCNVWDALKADR------------AGVLAGHD---NRVSC 317 (340)
T ss_dssp ------------CCSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCE------------EEEEECCS---SCEEE
T ss_pred ------------cccceEEEEECCCC----CEEEEECCCCeEEEEEcccCcE------------eeEeecCC---CcEEE
Confidence 01347778898863 45555544443 4444322110 01122333 22445
Q ss_pred EEeeCCCCeEEEeccCCCeEEEEe
Q psy731 394 SSLDEETGVIFYALLVKSGVGCWN 417 (494)
Q Consensus 394 ~~~D~~~G~ly~~~~~~~aI~~w~ 417 (494)
+++. .+|..+.+--....|..||
T Consensus 318 ~~~s-~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 318 LGVT-DDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEC-TTSSCEEEEETTSCEEEEC
T ss_pred EEEc-CCCCEEEEEcCCccEEecC
Confidence 6676 5676555555666777775
No 212
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=87.69 E-value=19 Score=33.94 Aligned_cols=201 Identities=12% Similarity=0.147 Sum_probs=104.1
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+.=.... .+..||+.+++.++.+...+ .....+.... +..++ ++=
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg--------~v~lWd~~~~~~~~~~~~~~-------~~v~~~~~~~-----~~~~l-~s~ 73 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSG--------RVELWNYETQVEVRSIQVTE-------TPVRAGKFIA-----RKNWI-IVG 73 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTS--------EEEEEETTTTEEEEEEECCS-------SCEEEEEEEG-----GGTEE-EEE
T ss_pred ceEEEEECCCCCEEEEEcCCC--------cEEEEECCCCceeEEeeccC-------CcEEEEEEeC-----CCCEE-EEE
Confidence 366667777776555322222 78899999999988877544 1222333221 22333 333
Q ss_pred CCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 208 SGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
+..+.|.|||+.+++.-+. ..|. .....+.+.. ++.++. +=.
T Consensus 74 s~d~~i~vwd~~~~~~~~~~~~h~-------------------------------~~v~~~~~~~-----~~~~l~-sgs 116 (304)
T 2ynn_A 74 SDDFRIRVFNYNTGEKVVDFEAHP-------------------------------DYIRSIAVHP-----TKPYVL-SGS 116 (304)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCS-------------------------------SCEEEEEECS-----SSSEEE-EEE
T ss_pred CCCCEEEEEECCCCcEEEEEeCCC-------------------------------CcEEEEEEcC-----CCCEEE-EEC
Confidence 4567899999998876443 1111 1133344432 223333 223
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||++++..-... + .|. ...+..++++|.+ ...|.-....++ ++|.+.+.
T Consensus 117 ~D~~v~lWd~~~~~~~~~~---~-----------~~h----~~~v~~v~~~p~~---~~~l~sgs~D~~v~iwd~~~~-- 173 (304)
T 2ynn_A 117 DDLTVKLWNWENNWALEQT---F-----------EGH----EHFVMCVAFNPKD---PSTFASGCLDRTVKVWSLGQS-- 173 (304)
T ss_dssp TTSCEEEEEGGGTTEEEEE---E-----------CCC----CSCEEEEEECTTC---TTEEEEEETTSEEEEEETTCS--
T ss_pred CCCeEEEEECCCCcchhhh---h-----------ccc----CCcEEEEEECCCC---CCEEEEEeCCCeEEEEECCCC--
Confidence 4667889999876432110 0 000 1236678888742 245555555443 55554221
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeC-CCCeEEEeccCCCeEEEEeCCCC
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDE-ETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~-~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
. ..++..... ......+.+.+ .+|.+.++--....|..||.+++
T Consensus 174 ---~-------~~~~~~~~~--~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 174 ---T-------PNFTLTTGQ--ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp ---S-------CSEEEECCC--TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred ---C-------ccceeccCC--cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 1 111111111 01112233332 35666677777889999999874
No 213
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.41 E-value=8.3 Score=37.00 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=38.7
Q ss_pred CEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC-CCCeEEEEEccCCceeEE
Q psy731 156 PSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS-GHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 156 Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs-~~~~iIVyd~~~~~~~rv 226 (494)
+....+|..+++.++++..... .....++.++++. .+++..+|+++. +...|.++|+.++...++
T Consensus 10 ~~~~~~d~~~g~~~~~l~~~~~--~~~~~~~~~~~~S----pdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l 75 (396)
T 3c5m_A 10 NFETFVDSDTQVKVTRLTPTDI--ICHRNYFYQKCFT----QDGKKLLFAGDFDGNRNYYLLNLETQQAVQL 75 (396)
T ss_dssp CEEEEECTTTCCEEEECSCTTS--CEECCCTTSCCBC----TTSCEEEEEECTTSSCEEEEEETTTTEEEEC
T ss_pred hhheeecCCCCcceEEEecCCC--CccceeeecCcCC----CCCCEEEEEEecCCCceEEEEECCCCcEEEe
Confidence 4556668888877665543320 0011123444432 234556788776 445799999999988777
No 214
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.25 E-value=19 Score=33.61 Aligned_cols=110 Identities=9% Similarity=0.088 Sum_probs=63.1
Q ss_pred CcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-c
Q psy731 278 DAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-T 356 (494)
Q Consensus 278 ~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ 356 (494)
..+++... .+..|.+||+++++.-.... ....+..++++|...+ ++.|+.....+. .
T Consensus 180 ~~~l~~~~-~d~~i~i~d~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~-~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 180 ERVVCAGY-DNGDIKLFDLRNMALRWETN--------------------IKNGVCSLEFDRKDIS-MNKLVATSLEGKFH 237 (357)
T ss_dssp CCEEEEEE-TTSEEEEEETTTTEEEEEEE--------------------CSSCEEEEEESCSSSS-CCEEEEEESTTEEE
T ss_pred CCEEEEEc-cCCeEEEEECccCceeeecC--------------------CCCceEEEEcCCCCCC-CCEEEEECCCCeEE
Confidence 34444443 35678899998876422211 1234777899883111 257777766654 6
Q ss_pred eEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCe-EEEeccCCCeEEEEeCCC
Q psy731 357 EFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGV-IFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 357 ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~-ly~~~~~~~aI~~w~~~~ 420 (494)
+|.+.+...... . ......+.. .....+++. .+|. ++++--....|..||.+.
T Consensus 238 i~d~~~~~~~~~------~-~~~~~~~~~---~~v~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 238 VFDMRTQHPTKG------F-ASVSEKAHK---STVWQVRHL-PQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEETTTE------E-EEEEEECCS---SCEEEEEEE-TTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEeCcCCCcccc------e-eeeccCCCc---CCEEEEEEC-CCCCcEEEEEeCCCcEEEeecCC
Confidence 677665322110 0 000111322 345667888 5676 777777788999999875
No 215
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=87.04 E-value=28 Score=35.37 Aligned_cols=67 Identities=16% Similarity=0.229 Sum_probs=37.4
Q ss_pred ceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEecc
Q psy731 330 GIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALL 408 (494)
Q Consensus 330 Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~ 408 (494)
.|..|++||++ +.|.-....+. ++|..+.+.+ -...|.. ....++++. .+|..+++--
T Consensus 510 ~v~~l~~s~dg----~~l~s~~~dg~v~lwd~~~~~~-------------~~~~~h~---~~v~~~~fs-~dg~~l~s~~ 568 (577)
T 2ymu_A 510 SVRGVAFSPDG----QTIASASDDKTVKLWNRNGQLL-------------QTLTGHS---SSVWGVAFS-PDGQTIASAS 568 (577)
T ss_dssp CEEEEEECTTS----SCEEEEETTSEEEEECTTSCEE-------------EEEECCS---SCEEEEEEC-TTSSCEEEEE
T ss_pred CEEEEEEcCCC----CEEEEEECcCEEEEEeCCCCEE-------------EEEcCCC---CCEEEEEEc-CCCCEEEEEe
Confidence 37779999873 56665544433 4554221111 1122332 234567777 5776666655
Q ss_pred CCCeEEEEe
Q psy731 409 VKSGVGCWN 417 (494)
Q Consensus 409 ~~~aI~~w~ 417 (494)
....|..||
T Consensus 569 ~D~~i~~Wd 577 (577)
T 2ymu_A 569 SDKTVKLWN 577 (577)
T ss_dssp TTSCEEEEC
T ss_pred CCCEEEEeC
Confidence 667788886
No 216
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=86.72 E-value=34 Score=35.96 Aligned_cols=71 Identities=10% Similarity=0.056 Sum_probs=44.0
Q ss_pred eeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccC
Q psy731 331 IHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLV 409 (494)
Q Consensus 331 i~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~ 409 (494)
+..+++||+ ++.|.-..-.++ ++|.+.+..++ .++..+.. .....+++. .+|.+..+--.
T Consensus 451 v~~va~spd----g~~lasgs~D~~v~lwd~~~~~~~-----------~~~~~~h~---~~v~~v~fs-pdg~~las~s~ 511 (611)
T 1nr0_A 451 SSCVALSND----KQFVAVGGQDSKVHVYKLSGASVS-----------EVKTIVHP---AEITSVAFS-NNGAFLVATDQ 511 (611)
T ss_dssp EEEEEECTT----SCEEEEEETTSEEEEEEEETTEEE-----------EEEEEECS---SCEEEEEEC-TTSSEEEEEET
T ss_pred ceEEEEeCC----CCEEEEeCCCCeEEEEEccCCcee-----------eeeccCCC---CceEEEEEC-CCCCEEEEEcC
Confidence 566777776 256666555554 66666543221 11222332 335678888 68877777778
Q ss_pred CCeEEEEeCCC
Q psy731 410 KSGVGCWNTFR 420 (494)
Q Consensus 410 ~~aI~~w~~~~ 420 (494)
...|..|+..+
T Consensus 512 d~~v~~w~~~~ 522 (611)
T 1nr0_A 512 SRKVIPYSVAN 522 (611)
T ss_dssp TSCEEEEEGGG
T ss_pred CCCEEEEEcCC
Confidence 88899999875
No 217
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=86.61 E-value=21 Score=33.32 Aligned_cols=211 Identities=11% Similarity=0.118 Sum_probs=102.6
Q ss_pred EEEEEECCCCc----EEEEEEcCCCccccccCCccceEEEeecCCCCCc-EEEEeeCCCCeEEEEEc-cCCceeEEec--
Q psy731 157 SVQVYDLRQQM----QIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNA-FLYIADSGHNHIVVYNY-RTNDSHIIHH-- 228 (494)
Q Consensus 157 klv~~dl~t~~----vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~-~vYItDs~~~~iIVyd~-~~~~~~rv~~-- 228 (494)
.|..||+.+++ +...+. ....+..+.+.. +.. +++.+. ..+.|.+||+ .++....+..
T Consensus 34 ~v~iw~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~-----~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~ 99 (342)
T 1yfq_A 34 SLTVYKFDIQAKNVDLLQSLR--------YKHPLLCCNFID-----NTDLQIYVGT-VQGEILKVDLIGSPSFQALTNNE 99 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEE--------CSSCEEEEEEEE-----SSSEEEEEEE-TTSCEEEECSSSSSSEEECBSCC
T ss_pred eEEEEEeCCCCccccceeeee--------cCCceEEEEECC-----CCCcEEEEEc-CCCeEEEEEeccCCceEeccccC
Confidence 56677776665 333221 223344455432 345 555554 4568999999 9888877743
Q ss_pred C-----ccccCCCCCcccc-CCccce--eeeecc---------cc---cccccccceeeEEeeecCCCCCcEEEEecCCC
Q psy731 229 N-----YLHFDPLFGDFTI-GGEYSE--FFQLKE---------KT---DYTEESKFSNMVVDVTSANCDDAFLYIADSGH 288 (494)
Q Consensus 229 ~-----~~~~dp~~~~f~i-~g~~~~--~f~l~~---------~~---~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~ 288 (494)
+ .....| +.+-+ ++..+. +|.+.. .. ..........+.+. .+. +++. ..+
T Consensus 100 ~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~-l~~~-~~d 169 (342)
T 1yfq_A 100 ANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN------SSR-LIVG-MNN 169 (342)
T ss_dssp CCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC------SSE-EEEE-EST
T ss_pred CCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec------CCc-EEEE-eCC
Confidence 2 233445 33333 333333 222221 11 01111222333332 122 3333 345
Q ss_pred CeEEEEEcCC-CcE--EEEecCCcccCCCCcceEEcCEEeeeecceeeeeecc-CCCCCceeEEEeeCCCc-ceEeeech
Q psy731 289 NHIVVYNYRT-NDS--HIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSP-LTRDNFRVMYFHPLAST-TEFAVTTK 363 (494)
Q Consensus 289 ~gliVydl~~-~~s--wrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp-~~~~g~r~LYf~plss~-~ly~V~T~ 363 (494)
..|.+||+++ ... .+.... ....+..|+++| + ++.++.....+. ++|.+.+.
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~-------------------~~~~i~~i~~~~~~----~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESG-------------------LKYQIRDVALLPKE----QEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECS-------------------CSSCEEEEEECSGG----GCEEEEEETTSEEEEEECCTT
T ss_pred CeEEEEECCccccccceeeecC-------------------CCCceeEEEECCCC----CCEEEEEecCCcEEEEEEcCC
Confidence 6789999987 432 111110 112366788887 6 256666665553 44444332
Q ss_pred hhcCCCcCccccccceEEeccc------CCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 364 VLQNRSLDFSRSNFDFKVMGSR------GTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 364 ~L~~~~~~~~~~~~~v~~~G~~------G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
- + .. .........+.. +.......++++ .+|.++++--....|..||..++
T Consensus 227 ~--~-~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 227 G--D-DY---NSSKRFAFRCHRLNLKDTNLAYPVNSIEFS-PRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp C--C-ST---TCTTCEEEECCCCCTTCCSSCCCEEEEEEC-TTTCCEEEEETTSCEEEEETTTT
T ss_pred C--c-cc---ccccceeeecccccccccccceeEEEEEEc-CCCCEEEEecCCceEEEEcCccH
Confidence 0 0 00 000111111211 001234567888 56766666667788999999874
No 218
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=86.35 E-value=41 Score=36.48 Aligned_cols=73 Identities=7% Similarity=0.013 Sum_probs=47.4
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCcccccc---C-CccceEEEeecCCCCCcEEEEeeCCCCe
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEE---S-KFSNMVVDVTSANCDNAFLYIADSGHNH 212 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~---S-~l~d~vVD~~~~~c~~~~vYItDs~~~~ 212 (494)
.++|++.... -.|+++|++|++++-+++++........ + .-..++++ ++.||+.. ..+.
T Consensus 66 ~g~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~v~~-~dg~ 128 (668)
T 1kv9_A 66 DGVIYTSMSW---------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW-------GDKVYVGT-LDGR 128 (668)
T ss_dssp TTEEEEEEGG---------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-------BTEEEEEC-TTSE
T ss_pred CCEEEEECCC---------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEE-------CCEEEEEc-CCCE
Confidence 5566666432 2799999999999988887652110000 0 01234553 56789985 3578
Q ss_pred EEEEEccCCc-eeEE
Q psy731 213 IVVYNYRTND-SHII 226 (494)
Q Consensus 213 iIVyd~~~~~-~~rv 226 (494)
|+.+|.++|+ .|++
T Consensus 129 l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQ 143 (668)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEeeee
Confidence 9999998887 5777
No 219
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=85.85 E-value=15 Score=35.06 Aligned_cols=74 Identities=14% Similarity=-0.044 Sum_probs=40.3
Q ss_pred cceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEec
Q psy731 329 TGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYAL 407 (494)
Q Consensus 329 ~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~ 407 (494)
..+..++++|+ ++.|+.....+. ++|.+.+..... .... ...+.. .....+++. .+|.+..+-
T Consensus 206 ~~v~~~~~sp~----~~~l~~~~~d~~i~iwd~~~~~~~~------~~~~--~~~~~~---~~v~~~~~s-~~~~~l~~~ 269 (377)
T 3dwl_C 206 GWVHAVGFSPS----GNALAYAGHDSSVTIAYPSAPEQPP------RALI--TVKLSQ---LPLRSLLWA-NESAIVAAG 269 (377)
T ss_dssp SSEEEEEECTT----SSCEEEEETTTEEC-CEECSTTSCE------EECC--CEECSS---SCEEEEEEE-ETTEEEEEE
T ss_pred ceEEEEEECCC----CCEEEEEeCCCcEEEEECCCCCCcc------eeeE--eecCCC---CceEEEEEc-CCCCEEEEE
Confidence 45888999987 357777666554 666665532200 0001 111222 224567777 567655554
Q ss_pred cCCCeEEEEeCC
Q psy731 408 LVKSGVGCWNTF 419 (494)
Q Consensus 408 ~~~~aI~~w~~~ 419 (494)
..+.+..|+..
T Consensus 270 -~~~~~~~~~~~ 280 (377)
T 3dwl_C 270 -YNYSPILLQGN 280 (377)
T ss_dssp -SSSSEEEECCC
T ss_pred -cCCcEEEEEeC
Confidence 45566677765
No 220
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=85.78 E-value=39 Score=35.71 Aligned_cols=87 Identities=8% Similarity=0.035 Sum_probs=52.6
Q ss_pred EeeEEEcCCCeEEEEeCCCCC-CCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 129 VVKVQSDPCDRLWALDSGVVE-GKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~-~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
|..+.+.++++..++-..... ........|..||+.+++. +++.-.. ........+++ ..+++..||+++
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~----~~~~~~~~~~~----SPdG~~la~~~~ 133 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPE----VSNAKLQYAGW----GPKGQQLIFIFE 133 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTT----CCSCCCSBCCB----CSSTTCEEEEET
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCc----cccccccccEE----CCCCCEEEEEEC
Confidence 566777778876555332221 0112235899999999886 2222111 11122334443 234677888887
Q ss_pred CCCCeEEEEEccCCceeEEe
Q psy731 208 SGHNHIVVYNYRTNDSHIIH 227 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv~ 227 (494)
+.|.++|+.++...++.
T Consensus 134 ---~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 134 ---NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp ---TEEEEESSSSSCCEEEE
T ss_pred ---CeEEEEECCCCceEEEe
Confidence 68999999999998884
No 221
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=85.67 E-value=38 Score=35.49 Aligned_cols=27 Identities=7% Similarity=0.028 Sum_probs=18.1
Q ss_pred CeEEeeCCCC-eEEEeccCC-------CeEEEEeCC
Q psy731 392 GASSLDEETG-VIFYALLVK-------SGVGCWNTF 419 (494)
Q Consensus 392 ~g~~~D~~~G-~ly~~~~~~-------~aI~~w~~~ 419 (494)
.+.+.. .+| .|+++.... ..|..||.+
T Consensus 191 ~~~~~S-pDG~~la~~~~~~~~~~~~~~~i~~~d~~ 225 (662)
T 3azo_A 191 TGPRLS-PDGRQAVWLAWDHPRMPWEGTELKTARVT 225 (662)
T ss_dssp CCCEEC-TTSSEEEEEEECTTCCTTTCEEEEEEEEC
T ss_pred cCceEC-CCCCEEEEEECCCCCCCCCCcEEEEEEEC
Confidence 345677 455 577666443 579999987
No 222
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=85.51 E-value=11 Score=40.30 Aligned_cols=26 Identities=15% Similarity=0.239 Sum_probs=19.6
Q ss_pred CcEEEEecCCCCeEEEEEcCCCcEEEEec
Q psy731 278 DAFLYIADSGHNHIVVYNYRTNDSHIIHH 306 (494)
Q Consensus 278 ~~~~YI~D~~~~gliVydl~~~~swrv~~ 306 (494)
+..||..| ..|.++|+.+++..++..
T Consensus 122 ~~la~~~~---~~i~~~~~~~g~~~~l~~ 147 (719)
T 1z68_A 122 SKLAYVYQ---NNIYLKQRPGDPPFQITF 147 (719)
T ss_dssp TCEEEEET---TEEEEESSTTSCCEECCC
T ss_pred CEEEEEEC---CeEEEEeCCCCCcEEEec
Confidence 46777764 589999999988777653
No 223
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=85.46 E-value=16 Score=39.05 Aligned_cols=15 Identities=7% Similarity=0.410 Sum_probs=13.7
Q ss_pred eEEEEEccCCceeEE
Q psy731 212 HIVVYNYRTNDSHII 226 (494)
Q Consensus 212 ~iIVyd~~~~~~~rv 226 (494)
.|.+||+.+++..++
T Consensus 65 ~i~~~d~~~g~~~~~ 79 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLL 79 (741)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred EEEEEECCCCceeEc
Confidence 799999999998887
No 224
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=85.46 E-value=39 Score=35.48 Aligned_cols=110 Identities=11% Similarity=0.103 Sum_probs=59.2
Q ss_pred EEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceE
Q psy731 280 FLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEF 358 (494)
Q Consensus 280 ~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly 358 (494)
+..++-..+..+.+||..+.+.-+.. .| -...|..++.+|++ +.|.-...-++ ++|
T Consensus 161 ~~l~s~s~D~~v~lwd~~~~~~~~~l---------------~~----H~~~V~~v~fspdg----~~las~s~D~~i~lw 217 (611)
T 1nr0_A 161 FRIISGSDDNTVAIFEGPPFKFKSTF---------------GE----HTKFVHSVRYNPDG----SLFASTGGDGTIVLY 217 (611)
T ss_dssp CEEEEEETTSCEEEEETTTBEEEEEE---------------CC----CSSCEEEEEECTTS----SEEEEEETTSCEEEE
T ss_pred eEEEEEeCCCeEEEEECCCCeEeeee---------------cc----ccCceEEEEECCCC----CEEEEEECCCcEEEE
Confidence 33444445677889987765432211 01 01347788998863 45554444443 555
Q ss_pred eeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 359 AVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 359 ~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.+.+..... .+. ....+..|.. ....++++. .+|.++.+--....|..||..++
T Consensus 218 d~~~g~~~~-~~~----~~~~~~~~h~---~~V~~v~~s-pdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 218 NGVDGTKTG-VFE----DDSLKNVAHS---GSVFGLTWS-PDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp ETTTCCEEE-ECB----CTTSSSCSSS---SCEEEEEEC-TTSSEEEEEETTSEEEEEETTTT
T ss_pred ECCCCcEee-eec----cccccccccC---CCEEEEEEC-CCCCEEEEEeCCCeEEEEeCCCC
Confidence 543321100 000 0001111332 335567888 68877777778889999999864
No 225
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=85.42 E-value=24 Score=32.98 Aligned_cols=65 Identities=20% Similarity=0.202 Sum_probs=35.1
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCC-CcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCD-NAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~-~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
.|..||+.+++.++.+.--. .......+..+.... .... +.+++.+ +..+.|.|||+.+++.-+.
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~--~~~~~~~~l~~~-~~dg~i~v~d~~~~~~~~~ 110 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYV--DADADENFYTCAWTY--DSNTSHPLLAVA-GSRGIIRIINPITMQCIKH 110 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEE--CSCTTCCEEEEEEEE--CTTTCCEEEEEE-ETTCEEEEECTTTCCEEEE
T ss_pred EEEEEEcCCCcEEEeeeecc--ccCCCCcEEEEEecc--CCCCCCCEEEEe-cCCCEEEEEEchhceEeee
Confidence 68888888877665544211 001223344444432 1111 3344444 3456899999998876444
No 226
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=85.19 E-value=27 Score=33.38 Aligned_cols=31 Identities=10% Similarity=0.137 Sum_probs=23.8
Q ss_pred CCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 390 QSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 390 qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
....+++. .+|.++++--....|..||..++
T Consensus 293 ~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 293 WVMSLSFN-DSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp CEEEEEEC-SSSSEEEEEETTSEEEEEETTTT
T ss_pred cEEEEEEC-CCCCEEEEEeCCCeEEEEEcCCC
Confidence 34567888 57777777778889999999874
No 227
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=85.14 E-value=35 Score=34.66 Aligned_cols=70 Identities=16% Similarity=0.202 Sum_probs=41.1
Q ss_pred ceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEecc
Q psy731 330 GIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALL 408 (494)
Q Consensus 330 Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~ 408 (494)
.+.+|+++|++ +.|......+. ++|....+.+ -+..|.. .....+++. .+|.+..+--
T Consensus 428 ~v~~~~~s~d~----~~l~~~~~d~~v~~w~~~~~~~-------------~~~~~~~---~~v~~~~~s-pd~~~las~~ 486 (577)
T 2ymu_A 428 SVWGVAFSPDD----QTIASASDDKTVKLWNRNGQLL-------------QTLTGHS---SSVRGVAFS-PDGQTIASAS 486 (577)
T ss_dssp CEEEEEECTTS----SEEEEEETTSEEEEEETTSCEE-------------EEEECCS---SCEEEEEEC-TTSCEEEEEE
T ss_pred CeEEEEECCCC----CEEEEEcCCCEEEEEECCCCEE-------------EEEcCCC---CCEEEEEEc-CCCCEEEEEe
Confidence 36678999863 55655544432 4443222111 1122332 334567888 6787777777
Q ss_pred CCCeEEEEeCCC
Q psy731 409 VKSGVGCWNTFR 420 (494)
Q Consensus 409 ~~~aI~~w~~~~ 420 (494)
....|..||.++
T Consensus 487 ~d~~i~iw~~~~ 498 (577)
T 2ymu_A 487 DDKTVKLWNRNG 498 (577)
T ss_dssp TTSEEEEEETTS
T ss_pred CCCEEEEEcCCC
Confidence 788899999766
No 228
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=84.64 E-value=27 Score=32.84 Aligned_cols=180 Identities=13% Similarity=0.161 Sum_probs=91.8
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeE-E-ecCccccC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHI-I-HHNYLHFD 234 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~r-v-~~~~~~~d 234 (494)
.|..||+.+++.++.+.-.. ..+..+.+. .++.++ +|=+..+.|.+||+.++..-. . ..|
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~-------~~v~~~~~~-----~~~~~l-~sgs~D~~v~lWd~~~~~~~~~~~~~h----- 139 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHP-------DYIRSIAVH-----PTKPYV-LSGSDDLTVKLWNWENNWALEQTFEGH----- 139 (304)
T ss_dssp EEEEEETTTCCEEEEEECCS-------SCEEEEEEC-----SSSSEE-EEEETTSCEEEEEGGGTTEEEEEECCC-----
T ss_pred EEEEEECCCCcEEEEEeCCC-------CcEEEEEEc-----CCCCEE-EEECCCCeEEEEECCCCcchhhhhccc-----
Confidence 68888999998887765322 334444442 123333 454566789999998874321 1 110
Q ss_pred CCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCC
Q psy731 235 PLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPL 314 (494)
Q Consensus 235 p~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~ 314 (494)
......+.+.. .+....++=..+..|.+||+.+...-...+.
T Consensus 140 --------------------------~~~v~~v~~~p-----~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~------- 181 (304)
T 2ynn_A 140 --------------------------EHFVMCVAFNP-----KDPSTFASGCLDRTVKVWSLGQSTPNFTLTT------- 181 (304)
T ss_dssp --------------------------CSCEEEEEECT-----TCTTEEEEEETTSEEEEEETTCSSCSEEEEC-------
T ss_pred --------------------------CCcEEEEEECC-----CCCCEEEEEeCCCeEEEEECCCCCccceecc-------
Confidence 11122333321 1111223333456788999876542111000
Q ss_pred CcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCe
Q psy731 315 FGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGA 393 (494)
Q Consensus 315 ~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g 393 (494)
+ ...++..++.+|.. + .+.|.-....++ ++|.+.+..+ ..+..|.. .....
T Consensus 182 -------~----~~~~v~~~~~~~~~-~-~~~l~s~s~D~~i~iWd~~~~~~------------~~~~~~h~---~~v~~ 233 (304)
T 2ynn_A 182 -------G----QERGVNYVDYYPLP-D-KPYMITASDDLTIKIWDYQTKSC------------VATLEGHM---SNVSF 233 (304)
T ss_dssp -------C----CTTCEEEEEECCST-T-CCEEEEEETTSEEEEEETTTTEE------------EEEEECCS---SCEEE
T ss_pred -------C----CcCcEEEEEEEEcC-C-CCEEEEEcCCCeEEEEeCCCCcc------------ceeeCCCC---CCEEE
Confidence 0 01234456665531 1 234444444333 5554433211 11122333 23455
Q ss_pred EEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 394 SSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 394 ~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
+++. .+|.++++--....|..||..++
T Consensus 234 ~~~~-p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 234 AVFH-PTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp EEEC-SSSSEEEEEETTSCEEEEETTTC
T ss_pred EEEC-CCCCEEEEEcCCCeEEEEECCCC
Confidence 6777 57777777778889999999874
No 229
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=84.34 E-value=29 Score=33.06 Aligned_cols=197 Identities=16% Similarity=0.192 Sum_probs=102.2
Q ss_pred cCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEE
Q psy731 135 DPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIV 214 (494)
Q Consensus 135 D~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iI 214 (494)
..++.+-+.|... ++..||++++++++.+.++. ...+..+.+. ...++...+|=+..+.|.
T Consensus 92 s~D~~i~~w~~~~---------~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~----~~~~~~~l~s~s~dg~i~ 152 (343)
T 3lrv_A 92 GPCNRLLLLYPGN---------QITILDSKTNKVLREIEVDS------ANEIIYMYGH----NEVNTEYFIWADNRGTIG 152 (343)
T ss_dssp CSTTEEEEEETTT---------EEEEEETTTCCEEEEEECCC------SSCEEEEECC----C---CCEEEEEETTCCEE
T ss_pred cCCCeEEEEEccC---------ceEEeecCCcceeEEeecCC------CCCEEEEEcC----CCCCCCEEEEEeCCCcEE
Confidence 3456666666554 57788999999888777654 1122333321 101222334444567899
Q ss_pred EEEccCCceeEEecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEE
Q psy731 215 VYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVY 294 (494)
Q Consensus 215 Vyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVy 294 (494)
+||+.+++..++.... ....+..+.+.. +..++... ..+..|.+|
T Consensus 153 ~wd~~~~~~~~~~~~~-----------------------------~~~~i~~~~~~p-----dg~~lasg-~~dg~i~iw 197 (343)
T 3lrv_A 153 FQSYEDDSQYIVHSAK-----------------------------SDVEYSSGVLHK-----DSLLLALY-SPDGILDVY 197 (343)
T ss_dssp EEESSSSCEEEEECCC-----------------------------SSCCCCEEEECT-----TSCEEEEE-CTTSCEEEE
T ss_pred EEECCCCcEEEEEecC-----------------------------CCCceEEEEECC-----CCCEEEEE-cCCCEEEEE
Confidence 9999999886552100 011123334432 22333332 345678899
Q ss_pred EcCCCcEE--EEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCc
Q psy731 295 NYRTNDSH--IIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDF 372 (494)
Q Consensus 295 dl~~~~sw--rv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~ 372 (494)
|+++++.- ++.. - -...|..|+++|+ ++.|.-..-..-++|.+.+....
T Consensus 198 d~~~~~~~~~~~~~--~-----------------h~~~v~~l~fs~~----g~~l~s~~~~~v~iwd~~~~~~~------ 248 (343)
T 3lrv_A 198 NLSSPDQASSRFPV--D-----------------EEAKIKEVKFADN----GYWMVVECDQTVVCFDLRKDVGT------ 248 (343)
T ss_dssp ESSCTTSCCEECCC--C-----------------TTSCEEEEEECTT----SSEEEEEESSBEEEEETTSSTTC------
T ss_pred ECCCCCCCccEEec--c-----------------CCCCEEEEEEeCC----CCEEEEEeCCeEEEEEcCCCCcc------
Confidence 99987632 1110 0 0134778999986 35666655222255554332110
Q ss_pred cccccceEEe-cccCCCCCCCeEEeeCCCCeEEEeccC-CCeEEEEeCCC
Q psy731 373 SRSNFDFKVM-GSRGTGSQSGASSLDEETGVIFYALLV-KSGVGCWNTFR 420 (494)
Q Consensus 373 ~~~~~~v~~~-G~~G~~~qs~g~~~D~~~G~ly~~~~~-~~aI~~w~~~~ 420 (494)
..++.+ ++... ..+..++++ .+|....+-.. .+.|..|+..+
T Consensus 249 ----~~~~~~~~~~~~-~~~~~~~~~-~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 249 ----LAYPTYTIPEFK-TGTVTYDID-DSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp ----BSSCCCBC------CCEEEEEC-TTSSEEEEEETTTTEEEEEEECT
T ss_pred ----eeeccccccccc-ccceEEEEC-CCCCEEEEecCCCCcEEEEEEcc
Confidence 011110 01100 001358899 57765555444 88899998755
No 230
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=84.05 E-value=39 Score=34.32 Aligned_cols=176 Identities=11% Similarity=0.146 Sum_probs=99.8
Q ss_pred CEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEEecCccccCC
Q psy731 156 PSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDP 235 (494)
Q Consensus 156 Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv~~~~~~~dp 235 (494)
..+..|++.+++.++.+..+. ....+.+. +.++.++....+.|.+||+.++..... .+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-------~~~l~~~~~~d~~i~~~~~~~~~~~~~---~~---- 484 (615)
T 1pgu_A 427 DDLLILQSFTGDIIKSVRLNS--------PGSAVSLS-------QNYVAVGLEEGNTIQVFKLSDLEVSFD---LK---- 484 (615)
T ss_dssp SEEEEEETTTCCEEEEEECSS--------CEEEEEEC-------SSEEEEEETTTSCEEEEETTEEEEEEE---CS----
T ss_pred CceEEEeccCCceeeecccCC--------CceEEEEc-------CCEEEEeecCCCeEEEEECCCcccccc---cc----
Confidence 378888998998888776544 22223331 456666665467899999988765311 00
Q ss_pred CCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCC
Q psy731 236 LFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLF 315 (494)
Q Consensus 236 ~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~ 315 (494)
.........+.+.. ++.++.... .+..|.+||+.+++.-+..... +
T Consensus 485 ----------------------~~~~~~v~~~~~s~-----~g~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~-h----- 530 (615)
T 1pgu_A 485 ----------------------TPLRAKPSYISISP-----SETYIAAGD-VMGKILLYDLQSREVKTSRWAF-R----- 530 (615)
T ss_dssp ----------------------SCCSSCEEEEEECT-----TSSEEEEEE-TTSCEEEEETTTTEEEECCSCC-C-----
T ss_pred ----------------------CCccCceEEEEECC-----CCCEEEEcC-CCCeEEEeeCCCCcceeEeecC-C-----
Confidence 01112234444432 234554443 3567999999988754332110 1
Q ss_pred cceEEcCEEeeeecceeeeeecc----------CCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEE-ec
Q psy731 316 GDFTIGGVNFQWQTGIHGMSLSP----------LTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKV-MG 383 (494)
Q Consensus 316 ~~~~v~G~~f~~~~Gi~gIaLsp----------~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~-~G 383 (494)
...+..++.+| + ++.|......+. ++|.+.+.. ..++. .|
T Consensus 531 ------------~~~v~~~~~sp~~~~~~~~~~~----~~~l~~~~~dg~i~iw~~~~~~------------~~~~~~~~ 582 (615)
T 1pgu_A 531 ------------TSKINAISWKPAEKGANEEEIE----EDLVATGSLDTNIFIYSVKRPM------------KIIKALNA 582 (615)
T ss_dssp ------------SSCEEEEEECCCC------CCS----CCEEEEEETTSCEEEEESSCTT------------CCEEETTS
T ss_pred ------------CCceeEEEEcCccccccccccC----CCEEEEEcCCCcEEEEECCCCc------------eechhhhc
Confidence 13477799988 4 356666655554 677665421 01111 12
Q ss_pred ccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 384 SRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 384 ~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
.. ....+++.. .+|. .++--....|..|+.+.
T Consensus 583 h~---~~v~~l~~s-~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 583 HK---DGVNNLLWE-TPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ST---TCEEEEEEE-ETTE-EEEEETTSCEEEEEEC-
T ss_pred Cc---cceEEEEEc-CCCC-eEEecCCceEEEEeeec
Confidence 22 234567777 5677 56666778899998764
No 231
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=83.88 E-value=18 Score=39.16 Aligned_cols=27 Identities=22% Similarity=0.127 Sum_probs=21.7
Q ss_pred CcEEEEecCCCCeEEEEEcCCCcEEEEecC
Q psy731 278 DAFLYIADSGHNHIVVYNYRTNDSHIIHHN 307 (494)
Q Consensus 278 ~~~~YI~D~~~~gliVydl~~~~swrv~~~ 307 (494)
+..||+.| +.|.++|+.+++..|++..
T Consensus 124 ~~la~~~~---~~i~~~~~~~~~~~~lt~~ 150 (740)
T 4a5s_A 124 HKLAYVWN---NDIYVKIEPNLPSYRITWT 150 (740)
T ss_dssp TCEEEEET---TEEEEESSTTSCCEECCSC
T ss_pred CEEEEEEC---CeEEEEECCCCceEEEcCC
Confidence 56788875 6799999999998888653
No 232
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=83.86 E-value=21 Score=35.47 Aligned_cols=98 Identities=11% Similarity=0.056 Sum_probs=53.4
Q ss_pred CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechh
Q psy731 286 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKV 364 (494)
Q Consensus 286 ~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~ 364 (494)
..+..|.+||++++....+.+..... ..+..++.+|+ ++.|......+. .+|.+.++.
T Consensus 184 s~D~~v~iwd~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~----~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 184 SMEGTTRLQDFKGNILRVFASSDTIN-----------------IWFCSLDVSAS----SRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp CSSSCEEEEETTSCEEEEEECCSSCS-----------------CCCCCEEEETT----TTEEEEECSSSBEEEEESSSCB
T ss_pred eCCCEEEEeeccCCceeEEeccCCCC-----------------ccEEEEEECCC----CCEEEEEeCCCcEeeeccCcce
Confidence 34567889999887655544322111 12345667665 245555444443 455443322
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
+.. ..|.. ....++++.|....++.+--....|..||..+
T Consensus 243 ~~~-------------~~~h~---~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 243 LWN-------------LRMHK---KKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp CCC-------------SBCCS---SCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred eEE-------------Eeccc---ceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 211 11222 23456777754445666666778899999875
No 233
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=83.66 E-value=29 Score=32.54 Aligned_cols=106 Identities=8% Similarity=0.058 Sum_probs=55.8
Q ss_pred CCCeEEEEEcCCCc-EEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechh
Q psy731 287 GHNHIVVYNYRTND-SHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKV 364 (494)
Q Consensus 287 ~~~gliVydl~~~~-swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~ 364 (494)
.+..|.+||+++++ .+.+.+.... ....+..|+.+|++.. .+.|......+. ++|.+.+..
T Consensus 180 ~dg~i~i~d~~~~~~~~~~~~~~~~----------------h~~~v~~~~~sp~~~~-~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 180 ADNLVKIWKYNSDAQTYVLESTLEG----------------HSDWVRDVAWSPTVLL-RSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECC----------------CSSCEEEEEECCCCSS-SEEEEEEETTSCEEEEEESSTT
T ss_pred CCCeEEEEEecCCCcceeeEEEEec----------------ccCcEeEEEECCCCCC-CCeEEEEeCCCEEEEEeCCCCC
Confidence 35578899988654 2333221100 0133777899886211 356776666554 677665421
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
- . .....+...+.......++++ .+|.++++--....|..|+...
T Consensus 243 ~---~-------~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 243 G---P-------WKKTLLKEEKFPDVLWRASWS-LSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp S---C-------CEEEESSSSCCSSCEEEEEEC-SSSCCEEEEESSSSEEEEEEEE
T ss_pred c---c-------ceeeeeccccCCCcEEEEEEc-CCCCEEEEecCCCcEEEEeCCC
Confidence 0 0 001111111112234566787 5666555555578899999864
No 234
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.32 E-value=2.5 Score=40.95 Aligned_cols=104 Identities=16% Similarity=0.087 Sum_probs=60.0
Q ss_pred eeeeccCCCCCceeEEEeeCCCcceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCe
Q psy731 333 GMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSG 412 (494)
Q Consensus 333 gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~a 412 (494)
-||++|+ | .||-- ++.++|+++..-= ........-+.+|+.|-+. -..+.+| .+|+||.+ ....
T Consensus 45 ~laf~P~---G--~LYaV--~~G~Ly~~~~~t~-----~~~~W~~s~t~IG~~Gw~~-F~a~~fD-~~G~LYav--~dG~ 108 (236)
T 1tl2_A 45 FLFLSPG---G--ELYGV--LNDKIYKGTPPTH-----DNDNWMGRAKKIGNGGWNQ-FQFLFFD-PNGYLYAV--SKDK 108 (236)
T ss_dssp EEEECTT---S--CEEEE--ETTEEEEESCCCS-----TTCCHHHHCEEEECSCGGG-CSEEEEC-TTSCEEEE--ETTE
T ss_pred eEEECCC---c--cEEEE--eCCeEEEECCCCC-----CcccccccccEeccccccc-ceEEEEC-CCCCEEEe--CCCE
Confidence 4777663 2 46665 4456777764211 1111112245566655433 6789999 89999999 5589
Q ss_pred EEEEeCCCCccccccceeeeeecCCeE----ecc--cceEEcCCceEEEEecC
Q psy731 413 VGCWNTFRGEEYNEKSMGLVAEDNATL----IYP--SDIRVDRTGVLWVLSNK 459 (494)
Q Consensus 413 I~~w~~~~~~~~~~~~~~~v~~d~~~l----~~p--d~~~id~~g~Lwvlsnr 459 (494)
|+++++-+. .+-..+.. .+. -|. .-++++++|.||..++.
T Consensus 109 iyr~~pP~~-----~~~~Wl~~--a~~vg~~gw~~~~~lff~p~G~Lyav~dg 154 (236)
T 1tl2_A 109 LYKASPPQS-----DTDNWIAR--ATEVGSGGWSGFKFLFFHPNGYLYAVHGQ 154 (236)
T ss_dssp EEEESCCCS-----TTCCHHHH--SEEEECSSGGGEEEEEECTTSCEEEEETT
T ss_pred EEEeCCCcC-----CCCceecc--ccEeccCCCCceEEEEECCCceEEEEeCC
Confidence 999997220 11122111 111 111 56678999999988744
No 235
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=83.20 E-value=56 Score=35.48 Aligned_cols=106 Identities=8% Similarity=0.040 Sum_probs=57.8
Q ss_pred CCCeEEEEEcCCCc-EEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechh
Q psy731 287 GHNHIVVYNYRTND-SHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKV 364 (494)
Q Consensus 287 ~~~gliVydl~~~~-swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~ 364 (494)
.+..|.+||++++. .+++.+.... -...+..|+.+|++.. ++.|+.....+. ++|.+.+..
T Consensus 178 ~dg~I~iwd~~~~~~~~~~~~~~~~----------------h~~~V~~l~~sp~~~~-~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 178 ADNLVKIWKYNSDAQTYVLESTLEG----------------HSDWVRDVAWSPTVLL-RSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECC----------------CSSCEEEEEECCCCSS-SEEEEEEESSSCEEEEEESSSS
T ss_pred CCCeEEEEeccCCcccceeeeeecC----------------CCCcEEEEEeccCCCC-CCEEEEEecCCEEEEecCCCCC
Confidence 45678899988653 2222221100 0234778999986211 366777666654 677765531
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
-.-. .. .....+......+++++ .+|..+++--....|..|+...
T Consensus 241 ~~~~--------~~--~~~~~~~~~~v~~l~~s-pdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 241 GPWK--------KT--LLKEEKFPDVLWRASWS-LSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SCCB--------CC--BSSSSCCSSCCCCEEEC-TTTCCEEEECSSSCEECCBCCS
T ss_pred Ccce--------eE--EeccCCCCCceEEEEEc-CCCCEEEEEcCCCEEEEEecCC
Confidence 1000 00 01111112335567888 5676666666678899999874
No 236
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=83.00 E-value=33 Score=32.67 Aligned_cols=97 Identities=8% Similarity=0.102 Sum_probs=55.3
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||+++++..++..... ...+..++++|++ +.|.-....+. ++|.+.+...
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~~~~------------------~~~i~~~~~~pdg----~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHSAKS------------------DVEYSSGVLHKDS----LLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp TTCCEEEEESSSSCEEEEECCCS------------------SCCCCEEEECTTS----CEEEEECTTSCEEEEESSCTTS
T ss_pred CCCcEEEEECCCCcEEEEEecCC------------------CCceEEEEECCCC----CEEEEEcCCCEEEEEECCCCCC
Confidence 45678999999888755432210 1225668888862 45555444443 6666654322
Q ss_pred cCCCcCccccccceEEec-ccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 366 QNRSLDFSRSNFDFKVMG-SRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G-~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.- .+..+ .. .....+++. .+|...++-- .+.|..||.+++
T Consensus 205 ~~-----------~~~~~~h~---~~v~~l~fs-~~g~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 205 AS-----------SRFPVDEE---AKIKEVKFA-DNGYWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp CC-----------EECCCCTT---SCEEEEEEC-TTSSEEEEEE-SSBEEEEETTSS
T ss_pred Cc-----------cEEeccCC---CCEEEEEEe-CCCCEEEEEe-CCeEEEEEcCCC
Confidence 10 01112 22 235577888 5675444444 449999999874
No 237
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=82.57 E-value=38 Score=33.01 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=59.2
Q ss_pred ecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeec
Q psy731 284 ADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTT 362 (494)
Q Consensus 284 ~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T 362 (494)
+=..+..|.+||+.+++.-......+... ....+..++.++.+ ...|.-....++ ++|.+.+
T Consensus 175 s~s~D~~i~~wd~~~~~~~~~~~~~~~~~--------------h~~~v~~~~~~~~~---~~~l~sgs~D~~v~~wd~~~ 237 (380)
T 3iz6_a 175 TGSGDQTCVLWDVTTGQRISIFGSEFPSG--------------HTADVLSLSINSLN---ANMFISGSCDTTVRLWDLRI 237 (380)
T ss_dssp EECTTSCEEEECTTTCCEEEEECCCSSSS--------------CCSCEEEEEECSSS---CCEEEEEETTSCEEEEETTT
T ss_pred EECCCCcEEEEEcCCCcEEEEeecccCCC--------------CccCeEEEEeecCC---CCEEEEEECCCeEEEEECCC
Confidence 33456789999999887655432211100 01235566665531 234444444443 5554421
Q ss_pred hhhcCCCcCccccccce-EEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 363 KVLQNRSLDFSRSNFDF-KVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 363 ~~L~~~~~~~~~~~~~v-~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.. ..+ ...|.. .....+++. .+|..+++--....|..||..+|
T Consensus 238 -----~~-------~~~~~~~~h~---~~v~~v~~~-p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 238 -----TS-------RAVRTYHGHE---GDINSVKFF-PDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp -----TC-------CCCEEECCCS---SCCCEEEEC-TTSSEEEEECSSSCEEEEETTTT
T ss_pred -----CC-------cceEEECCcC---CCeEEEEEe-cCCCeEEEEcCCCeEEEEECCCC
Confidence 00 111 122433 335678888 68888888888899999999875
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=82.32 E-value=61 Score=35.25 Aligned_cols=24 Identities=17% Similarity=0.243 Sum_probs=19.2
Q ss_pred CCCeEEEeccCCCeEEEEeCCCCcc
Q psy731 399 ETGVIFYALLVKSGVGCWNTFRGEE 423 (494)
Q Consensus 399 ~~G~ly~~~~~~~aI~~w~~~~~~~ 423 (494)
..|.+|++. ....|.+||.++|++
T Consensus 485 agglvf~gt-~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 485 AGNLVFEGS-ADGRVIAYAADTGEK 508 (689)
T ss_dssp TTTEEEEEC-TTSEEEEEETTTCCE
T ss_pred CCCEEEEEC-CCCcEEEEECCCCcc
Confidence 678999985 567899999988743
No 239
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=81.41 E-value=63 Score=34.83 Aligned_cols=82 Identities=17% Similarity=0.145 Sum_probs=46.4
Q ss_pred EEEcCCCeEEEEeCCCCC-CCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCC
Q psy731 132 VQSDPCDRLWALDSGVVE-GKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGH 210 (494)
Q Consensus 132 i~iD~~~~LwvlD~G~~~-~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~ 210 (494)
+.+.++++..++-.+... .+......+..||+.++++.+ |.. .......++. ..+++.-||+.|
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---l~~-----~~~~~~~~~~----SPdG~~la~~~~--- 131 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT---EER-----IPNNTQWVTW----SPVGHKLAYVWN--- 131 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC---SSC-----CCTTEEEEEE----CSSTTCEEEEET---
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE---ccc-----CCCcceeeEE----CCCCCEEEEEEC---
Confidence 444556654444333210 001122467778888877543 111 1223333333 334677888876
Q ss_pred CeEEEEEccCCceeEEec
Q psy731 211 NHIVVYNYRTNDSHIIHH 228 (494)
Q Consensus 211 ~~iIVyd~~~~~~~rv~~ 228 (494)
+.|.++|+.+|...+++.
T Consensus 132 ~~i~~~~~~~~~~~~lt~ 149 (740)
T 4a5s_A 132 NDIYVKIEPNLPSYRITW 149 (740)
T ss_dssp TEEEEESSTTSCCEECCS
T ss_pred CeEEEEECCCCceEEEcC
Confidence 679999999999998843
No 240
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=81.31 E-value=50 Score=33.55 Aligned_cols=100 Identities=10% Similarity=0.029 Sum_probs=55.6
Q ss_pred EEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeec---ceeeeeeccCCCCCceeEEEeeCCCc-ce
Q psy731 282 YIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQT---GIHGMSLSPLTRDNFRVMYFHPLAST-TE 357 (494)
Q Consensus 282 YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~---Gi~gIaLsp~~~~g~r~LYf~plss~-~l 357 (494)
.++-..+..|.+||+.+++.-+..... .. .+..++++|+. ++.|+.....+. .+
T Consensus 176 l~~~~~d~~v~vwd~~~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 176 SMTVGDDGSVVFYQGPPFKFSASDRTH-------------------HKQGSFVRDVEFSPDS---GEFVITVGSDRKISC 233 (615)
T ss_dssp EEEEETTTEEEEEETTTBEEEEEECSS-------------------SCTTCCEEEEEECSTT---CCEEEEEETTCCEEE
T ss_pred EEEEeCCCcEEEEeCCCcceeeeeccc-------------------CCCCceEEEEEECCCC---CCEEEEEeCCCeEEE
Confidence 333345678889998876543322110 11 36778898851 256666555443 55
Q ss_pred EeeechhhcCCCcCccccccceEEe-----cccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 358 FAVTTKVLQNRSLDFSRSNFDFKVM-----GSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 358 y~V~T~~L~~~~~~~~~~~~~v~~~-----G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
|.+.+.. .+..+ +.. .....+++. +|.++++--....|..||..++
T Consensus 234 wd~~~~~-------------~~~~~~~~~~~~~---~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 234 FDGKSGE-------------FLKYIEDDQEPVQ---GGIFALSWL--DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp EETTTCC-------------EEEECCBTTBCCC---SCEEEEEES--SSSEEEEEETTSEEEEEETTTT
T ss_pred EECCCCC-------------EeEEecccccccC---CceEEEEEc--CCCEEEEEcCCCcEEEEECCCC
Confidence 5543211 11222 222 223455665 6666666667788999998864
No 241
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=80.77 E-value=44 Score=32.57 Aligned_cols=59 Identities=3% Similarity=-0.048 Sum_probs=37.2
Q ss_pred CCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 391 SGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 391 s~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
...+++. .+|.+..+--....|..||..++.+. ..+.+.. -.+..++.+.+||.+.++.
T Consensus 272 V~~~~~S-pdg~~lasgs~D~~V~iwd~~~~~~~-----~~~~~gH--~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 272 ITSMDVD-MKGELAVLASNDNSIALVKLKDLSMS-----KIFKQAH--SFAITEVTISPDSTYVASV 330 (365)
T ss_dssp EEEEEEC-TTSCEEEEEETTSCEEEEETTTTEEE-----EEETTSS--SSCEEEEEECTTSCEEEEE
T ss_pred eEeEEEC-CCCCceEEEcCCCEEEEEECCCCcEE-----EEecCcc--cCCEEEEEECCCCCEEEEE
Confidence 4567888 68887777777889999999875322 2221110 1245677777777655543
No 242
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=80.74 E-value=48 Score=32.98 Aligned_cols=79 Identities=10% Similarity=0.095 Sum_probs=48.3
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECC--CCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEE
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLR--QQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYI 205 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~--t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYI 205 (494)
.|..+...++++..++=.+.. . .|.+||+. +++.++.+.-.. .......+.+. .++.+++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d--g-----~v~iwd~~~~~~~~~~~~~~~~-----~~~~v~~~~~s-----p~~~~l~~ 166 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD--K-----SLLVFDVDKTSKNVLKLRKRFC-----FSKRPNAISIA-----EDDTTVII 166 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG--T-----EEEEEEECSSSSSCEEEEEEEE-----CSSCEEEEEEC-----TTSSEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCC--C-----eEEEEECcCCCCceeeeeeccc-----CCCCceEEEEc-----CCCCEEEE
Confidence 577778888887653322222 1 68888988 887777664211 11233344442 25567777
Q ss_pred eeCCCCeEEEEEccCCcee
Q psy731 206 ADSGHNHIVVYNYRTNDSH 224 (494)
Q Consensus 206 tDs~~~~iIVyd~~~~~~~ 224 (494)
++. .+.+.+||+.++...
T Consensus 167 ~~~-~g~v~~~~~~~~~~~ 184 (450)
T 2vdu_B 167 ADK-FGDVYSIDINSIPEE 184 (450)
T ss_dssp EET-TSEEEEEETTSCCCS
T ss_pred EeC-CCcEEEEecCCcccc
Confidence 765 567889998877653
No 243
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=80.72 E-value=39 Score=31.97 Aligned_cols=140 Identities=11% Similarity=0.062 Sum_probs=77.2
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE-ecCccccCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDP 235 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv-~~~~~~~dp 235 (494)
.|..||+++.+....+.- ..+.+..+.+. .+..++. +=+..+.|.+||+.+++.-+. .+
T Consensus 177 ~i~~wd~~~~~~~~~~~~-------h~~~v~~~~~s-----p~g~~l~-s~~~dg~i~iwd~~~~~~~~~~~~------- 236 (319)
T 3frx_A 177 MVKAWNLNQFQIEADFIG-------HNSNINTLTAS-----PDGTLIA-SAGKDGEIMLWNLAAKKAMYTLSA------- 236 (319)
T ss_dssp CEEEEETTTTEEEEEECC-------CCSCEEEEEEC-----TTSSEEE-EEETTCEEEEEETTTTEEEEEEEC-------
T ss_pred EEEEEECCcchhheeecC-------CCCcEEEEEEc-----CCCCEEE-EEeCCCeEEEEECCCCcEEEEecC-------
Confidence 577788888877665431 23334444442 1233333 333457899999998875443 11
Q ss_pred CCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCC
Q psy731 236 LFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLF 315 (494)
Q Consensus 236 ~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~ 315 (494)
......+++.. +..++..+. ..++.||++..+...+-....+....
T Consensus 237 -------------------------~~~v~~~~~sp-----~~~~la~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~-- 282 (319)
T 3frx_A 237 -------------------------QDEVFSLAFSP-----NRYWLAAAT--ATGIKVFSLDPQYLVDDLRPEFAGYS-- 282 (319)
T ss_dssp -------------------------CSCEEEEEECS-----SSSEEEEEE--TTEEEEEEETTEEEEEEECCCCTTCC--
T ss_pred -------------------------CCcEEEEEEcC-----CCCEEEEEc--CCCcEEEEeCcCeeeeccCccccccc--
Confidence 01123333332 233444433 46789999987765554332211000
Q ss_pred cceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeech
Q psy731 316 GDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTK 363 (494)
Q Consensus 316 ~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~ 363 (494)
-.....+..++.||+ ++.|+-..-.+. ++|.+.|+
T Consensus 283 ---------~~~~~~v~~~~~spd----g~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 283 ---------KAAEPHAVSLAWSAD----GQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ---------GGGCCCEEEEEECTT----SSEEEEEETTSCEEEEEEEEC
T ss_pred ---------cCcCcceeEEEECCC----CCEEEEeecCceEEEEEEeec
Confidence 001234677999997 368877766665 78888764
No 244
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=80.51 E-value=45 Score=32.58 Aligned_cols=209 Identities=15% Similarity=0.165 Sum_probs=106.3
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccc-----------cccCCccceEEEeecC
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDY-----------TEESKFSNMVVDVTSA 196 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~-----------~~~S~l~d~vVD~~~~ 196 (494)
.|..+...+++++.+. |.. . .+.+||+.+++++.++.-...... .....+..+...
T Consensus 66 ~V~~v~fspdg~~la~--g~~--~-----~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s---- 132 (393)
T 1erj_A 66 VVCCVKFSNDGEYLAT--GCN--K-----TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS---- 132 (393)
T ss_dssp CCCEEEECTTSSEEEE--ECB--S-----CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC----
T ss_pred EEEEEEECCCCCEEEE--EcC--C-----cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEEC----
Confidence 3556667777887775 222 1 577899999988876643220000 001112233331
Q ss_pred CCCCcEEEEeeCCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCC
Q psy731 197 NCDNAFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSAN 275 (494)
Q Consensus 197 ~c~~~~vYItDs~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~ 275 (494)
.++.++.. =+..+.|.+||+.+++.-+. ..|. .....+.+..
T Consensus 133 -~dg~~l~s-~~~d~~i~iwd~~~~~~~~~~~~h~-------------------------------~~v~~~~~~p---- 175 (393)
T 1erj_A 133 -PDGKFLAT-GAEDRLIRIWDIENRKIVMILQGHE-------------------------------QDIYSLDYFP---- 175 (393)
T ss_dssp -TTSSEEEE-EETTSCEEEEETTTTEEEEEECCCS-------------------------------SCEEEEEECT----
T ss_pred -CCCCEEEE-EcCCCeEEEEECCCCcEEEEEccCC-------------------------------CCEEEEEEcC----
Confidence 23444443 34567899999998876544 1110 1122233321
Q ss_pred CCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc
Q psy731 276 CDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST 355 (494)
Q Consensus 276 c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~ 355 (494)
++.+++.+ ..+..+.+||+++++.-... ....++..++++|.+ ++.|......+.
T Consensus 176 -~~~~l~s~-s~d~~v~iwd~~~~~~~~~~--------------------~~~~~v~~~~~~~~~---~~~l~~~s~d~~ 230 (393)
T 1erj_A 176 -SGDKLVSG-SGDRTVRIWDLRTGQCSLTL--------------------SIEDGVTTVAVSPGD---GKYIAAGSLDRA 230 (393)
T ss_dssp -TSSEEEEE-ETTSEEEEEETTTTEEEEEE--------------------ECSSCEEEEEECSTT---CCEEEEEETTSC
T ss_pred -CCCEEEEe-cCCCcEEEEECCCCeeEEEE--------------------EcCCCcEEEEEECCC---CCEEEEEcCCCc
Confidence 22333322 34567889999887632211 122346678888731 355655555544
Q ss_pred -ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 356 -TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 356 -~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
++|.+.+..+...- .. ..-...|.. .....++++ .+|.+.++--....|..||...
T Consensus 231 v~iwd~~~~~~~~~~-~~----~~~~~~~h~---~~v~~v~~~-~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 231 VRVWDSETGFLVERL-DS----ENESGTGHK---DSVYSVVFT-RDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp EEEEETTTCCEEEEE-C----------CCCS---SCEEEEEEC-TTSSEEEEEETTSEEEEEEC--
T ss_pred EEEEECCCCcEEEee-cc----cccCCCCCC---CCEEEEEEC-CCCCEEEEEeCCCEEEEEECCC
Confidence 56655443221100 00 000001222 334567888 6787777777788999999865
No 245
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.21 E-value=9.3 Score=40.10 Aligned_cols=142 Identities=9% Similarity=0.049 Sum_probs=75.5
Q ss_pred eeeeccCCCCCceeEEEeeCCCcceEeeech-hhcCCCcCccccccceEE----ecccCCCCCCCeEEeeCC---CCeEE
Q psy731 333 GMSLSPLTRDNFRVMYFHPLASTTEFAVTTK-VLQNRSLDFSRSNFDFKV----MGSRGTGSQSGASSLDEE---TGVIF 404 (494)
Q Consensus 333 gIaLsp~~~~g~r~LYf~plss~~ly~V~T~-~L~~~~~~~~~~~~~v~~----~G~~G~~~qs~g~~~D~~---~G~ly 404 (494)
+||..|+ |...||+.-..+ +++.+... ..+...+ .++...+.. -++.| .-|++++|. +|.||
T Consensus 18 ~~a~~pd---G~~rl~V~er~G-~i~~~~~~g~~~~~~~--~~~~~~~~~g~~~~~e~G----llgia~~P~f~~n~~lY 87 (463)
T 2wg3_C 18 GALHSGD---GSQRLFILEKEG-YVKILTPEGEIFKEPY--LDIHKLVQSGIKGGDERG----LLSLAFHPNYKKNGKLY 87 (463)
T ss_dssp EEECCSS---SSCCEEEEETTT-EEEEECTTSCBCSSCS--EECTTTBCCCCSSSCCCS----EEEEEECTTHHHHCEEE
T ss_pred EEEECCC---CCeEEEEEeCCc-eEEEEeCCCCeeeeee--cCCcceeccCccccCCCc----ceeeEeCCCCcCCCEEE
Confidence 4888776 333688887776 67666421 0000010 011111110 11232 246899964 68899
Q ss_pred EeccCC------------CeEEEEeCCCCc--cccccceeeeeecC--CeEecccceEEcCCceEEEEe-cCch--hhhc
Q psy731 405 YALLVK------------SGVGCWNTFRGE--EYNEKSMGLVAEDN--ATLIYPSDIRVDRTGVLWVLS-NKLP--VFLY 465 (494)
Q Consensus 405 ~~~~~~------------~aI~~w~~~~~~--~~~~~~~~~v~~d~--~~l~~pd~~~id~~g~Lwvls-nrl~--~~~~ 465 (494)
+..... ++|.+|....+. .....+.++|.+-. ..--|...|.+++||+|||.+ ++-. .-..
T Consensus 88 v~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~ 167 (463)
T 2wg3_C 88 VSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDME 167 (463)
T ss_dssp EEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCHHHHH
T ss_pred EEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCCCccc
Confidence 886532 588888865310 12222334444321 123466778999999999996 2211 1111
Q ss_pred CCCCCCcccEEEEEEechh
Q psy731 466 SKLKPEDINVRIFKSTVRN 484 (494)
Q Consensus 466 ~~~~~~~~nfrI~r~~~~~ 484 (494)
...+.+...=.|+|++++-
T Consensus 168 ~~q~~~~~~GkIlRi~~dg 186 (463)
T 2wg3_C 168 EMDGLSDFTGSVLRLDVDT 186 (463)
T ss_dssp HCTTCCSCTTEEEEEBCCC
T ss_pred cccCcCCCCeeEEEEECCC
Confidence 2334556666799998764
No 246
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=78.89 E-value=48 Score=31.97 Aligned_cols=176 Identities=11% Similarity=0.170 Sum_probs=90.6
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE-ecCccccCC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII-HHNYLHFDP 235 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv-~~~~~~~dp 235 (494)
.|..||+.+++.++++.-.. ..... ++... ..++...++=+..+.|.+||+.+++.-+. ..|
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~-------~~v~~--~~~~~--~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h------ 239 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHG-------ADVLC--LDLAP--SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETH------ 239 (354)
T ss_dssp EEEEEETTTCCEEEEEECCS-------SCEEE--EEECC--CSSCCEEEEEETTSCEEEEETTTCCEEEEECCC------
T ss_pred cEEEEeCCCCeEEEEEcCCC-------CCeEE--EEEEe--CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC------
Confidence 68889999999988775322 11222 22211 11223334444567899999999876443 110
Q ss_pred CCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCC
Q psy731 236 LFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLF 315 (494)
Q Consensus 236 ~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~ 315 (494)
......+.+.. +..++. +=..+..+.+||+++++........-
T Consensus 240 -------------------------~~~v~~v~~~p-----~~~~l~-s~s~D~~v~lwd~~~~~~~~~~~~~~------ 282 (354)
T 2pbi_B 240 -------------------------ESDVNSVRYYP-----SGDAFA-SGSDDATCRLYDLRADREVAIYSKES------ 282 (354)
T ss_dssp -------------------------SSCEEEEEECT-----TSSEEE-EEETTSCEEEEETTTTEEEEEECCTT------
T ss_pred -------------------------CCCeEEEEEeC-----CCCEEE-EEeCCCeEEEEECCCCcEEEEEcCCC------
Confidence 11123333331 122222 22345678899998876443321100
Q ss_pred cceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeE
Q psy731 316 GDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGAS 394 (494)
Q Consensus 316 ~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~ 394 (494)
...++..++++|++ +.|+-....+. ++|.+.+... .....|.. .....+
T Consensus 283 -----------~~~~~~~~~~s~~g----~~l~~g~~d~~i~vwd~~~~~~------------~~~l~~h~---~~v~~l 332 (354)
T 2pbi_B 283 -----------IIFGASSVDFSLSG----RLLFAGYNDYTINVWDVLKGSR------------VSILFGHE---NRVSTL 332 (354)
T ss_dssp -----------CCSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCSE------------EEEECCCS---SCEEEE
T ss_pred -----------cccceeEEEEeCCC----CEEEEEECCCcEEEEECCCCce------------EEEEECCC---CcEEEE
Confidence 01245668888862 56655554443 5555422110 01122333 234456
Q ss_pred EeeCCCCeEEEeccCCCeEEEEe
Q psy731 395 SLDEETGVIFYALLVKSGVGCWN 417 (494)
Q Consensus 395 ~~D~~~G~ly~~~~~~~aI~~w~ 417 (494)
++. .+|..+.+--....|..|+
T Consensus 333 ~~s-pdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 333 RVS-PDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEC-TTSSCEEEEETTSEEEEEC
T ss_pred EEC-CCCCEEEEEcCCCCEEecC
Confidence 776 5676666666666777774
No 247
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=78.22 E-value=48 Score=31.59 Aligned_cols=27 Identities=11% Similarity=0.330 Sum_probs=18.8
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
++.+++.+.. ...|.++|+.++...++
T Consensus 91 dg~~l~~~~~-~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 91 DDDALFYVKD-GRNLMRVDLATLEENVV 117 (388)
T ss_dssp TSSEEEEEET-TTEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeC-CCeEEEEECCCCcceee
Confidence 3444444443 25899999999998877
No 248
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=77.55 E-value=53 Score=31.69 Aligned_cols=182 Identities=13% Similarity=0.186 Sum_probs=94.9
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCC-ce-eEEecCccccC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTN-DS-HIIHHNYLHFD 234 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~-~~-~rv~~~~~~~d 234 (494)
+|..||+.+++.+..+.++. ....+.. ....+.++ ..+.|.+||+.++ +. +.+..
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~--------~v~~v~~-------~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~------ 138 (355)
T 3vu4_A 82 VVHIWDDVKKQDVSRIKVDA--------PVKDLFL-------SREFIVVS--YGDVISVFKFGNPWKRITDDIR------ 138 (355)
T ss_dssp EEEEEETTTTEEEEEEECSS--------CEEEEEE-------CSSEEEEE--ETTEEEEEESSTTCCBSSCCEE------
T ss_pred EEEEEECCCCcEEEEEECCC--------ceEEEEE-------cCCEEEEE--EcCEEEEEECCCCceeeEEecc------
Confidence 89999999999999888655 1222332 12233333 2457999999887 22 11100
Q ss_pred CCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcc---c
Q psy731 235 PLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLH---F 311 (494)
Q Consensus 235 p~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~---~ 311 (494)
... ...... ...++.+......|.+||+.+++.++....... .
T Consensus 139 -----------------------------~~~-~~~~s~----~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~ 184 (355)
T 3vu4_A 139 -----------------------------FGG-VCEFSN----GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAI 184 (355)
T ss_dssp -----------------------------EEE-EEEEET----TEEEEEESSCTTCEEEEECCC----------------
T ss_pred -----------------------------CCc-eEEEEc----cEEEEeCCCcCcEEEEEECCCCCcccccccccccccc
Confidence 000 111111 233443244566789999998875543211100 0
Q ss_pred CCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc--ceEeeechhhcCCCcCccccccceEEec-ccCCC
Q psy731 312 DPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST--TEFAVTTKVLQNRSLDFSRSNFDFKVMG-SRGTG 388 (494)
Q Consensus 312 dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~--~ly~V~T~~L~~~~~~~~~~~~~v~~~G-~~G~~ 388 (494)
.|. ...+.|. ...|..|+++|+ ++.|.-...-++ ++|.+.+..+. ..++ .| ..
T Consensus 185 ~p~--~~~~~~h----~~~v~~~~~s~~----g~~l~s~s~d~~~v~iwd~~~~~~~----------~~~~-~g~h~--- 240 (355)
T 3vu4_A 185 LGK--GVLIKAH----TNPIKMVRLNRK----SDMVATCSQDGTIIRVFKTEDGVLV----------REFR-RGLDR--- 240 (355)
T ss_dssp --C--CEEECCC----SSCEEEEEECTT----SSEEEEEETTCSEEEEEETTTCCEE----------EEEE-CTTCC---
T ss_pred Ccc--cEEEEcc----CCceEEEEECCC----CCEEEEEeCCCCEEEEEECCCCcEE----------EEEE-cCCCC---
Confidence 000 0111111 245888999986 356666666553 56665432110 1111 02 22
Q ss_pred CCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 389 SQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 389 ~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
.....++++ .+|.++.+--....|..||...
T Consensus 241 ~~v~~~~~s-~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 241 ADVVDMKWS-TDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp SCEEEEEEC-TTSCEEEEEETTCEEEEEESSC
T ss_pred CcEEEEEEC-CCCCEEEEEECCCEEEEEEccC
Confidence 335567888 6888888878889999999875
No 249
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=75.74 E-value=61 Score=31.50 Aligned_cols=71 Identities=6% Similarity=0.015 Sum_probs=46.8
Q ss_pred cceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEE--ecccCCCCCCCeEEeeCCCCeEEE
Q psy731 329 TGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKV--MGSRGTGSQSGASSLDEETGVIFY 405 (494)
Q Consensus 329 ~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~--~G~~G~~~qs~g~~~D~~~G~ly~ 405 (494)
.+|..+++||++ +.|.....-++ ++|.+.+..+ ++. -|.. ..-.++++. .+|.+..
T Consensus 270 ~~V~~~~~Spdg----~~lasgs~D~~V~iwd~~~~~~-------------~~~~~~gH~---~~V~~v~fS-pdg~~la 328 (365)
T 4h5i_A 270 KGITSMDVDMKG----ELAVLASNDNSIALVKLKDLSM-------------SKIFKQAHS---FAITEVTIS-PDSTYVA 328 (365)
T ss_dssp SCEEEEEECTTS----CEEEEEETTSCEEEEETTTTEE-------------EEEETTSSS---SCEEEEEEC-TTSCEEE
T ss_pred CCeEeEEECCCC----CceEEEcCCCEEEEEECCCCcE-------------EEEecCccc---CCEEEEEEC-CCCCEEE
Confidence 457889999973 67776665544 6666543211 111 1332 335678888 6898888
Q ss_pred eccCCCeEEEEeCCC
Q psy731 406 ALLVKSGVGCWNTFR 420 (494)
Q Consensus 406 ~~~~~~aI~~w~~~~ 420 (494)
+--..+.|..|+...
T Consensus 329 S~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 329 SVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTSEEEEEECCT
T ss_pred EEeCCCeEEEEEcCC
Confidence 888899999999754
No 250
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=75.73 E-value=86 Score=33.22 Aligned_cols=24 Identities=13% Similarity=0.124 Sum_probs=17.2
Q ss_pred EEEeeCCCCeEEEEEccCCceeEE
Q psy731 203 LYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 203 vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
..++=+..+.|.|||+.+++..+.
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~ 556 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRST 556 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEE
T ss_pred eEEEEeCCCeEEEEECCCCcEEEE
Confidence 445555667899999998876554
No 251
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=74.47 E-value=95 Score=33.12 Aligned_cols=24 Identities=4% Similarity=0.098 Sum_probs=18.4
Q ss_pred CcEEEEecCCC---CeEEEEEcCCCcE
Q psy731 278 DAFLYIADSGH---NHIVVYNYRTNDS 301 (494)
Q Consensus 278 ~~~~YI~D~~~---~gliVydl~~~~s 301 (494)
+..||..|..+ ..|.|+|+++++.
T Consensus 133 ~~la~~~~~~G~~~~~i~v~dl~tg~~ 159 (695)
T 2bkl_A 133 KKVAFAQKPNAADEAVLHVIDVDSGEW 159 (695)
T ss_dssp SEEEEEEEETTCSCCEEEEEETTTCCB
T ss_pred CEEEEEECCCCCceEEEEEEECCCCCC
Confidence 56788887543 6899999998873
No 252
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=73.68 E-value=1e+02 Score=33.18 Aligned_cols=25 Identities=8% Similarity=0.142 Sum_probs=18.3
Q ss_pred CcEEEEecCCC---CeEEEEEcCCCcEE
Q psy731 278 DAFLYIADSGH---NHIVVYNYRTNDSH 302 (494)
Q Consensus 278 ~~~~YI~D~~~---~gliVydl~~~~sw 302 (494)
+..||..|..+ ..|.|+|+++++..
T Consensus 175 ~~la~~~~~~G~e~~~i~v~dl~tg~~~ 202 (741)
T 1yr2_A 175 RLLAYSVQDGGSDWRTVKFVGVADGKPL 202 (741)
T ss_dssp SEEEEEEEETTCSEEEEEEEETTTCCEE
T ss_pred CEEEEEEcCCCCceEEEEEEECCCCCCC
Confidence 56678777543 46999999998753
No 253
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=73.52 E-value=58 Score=30.20 Aligned_cols=55 Identities=18% Similarity=0.250 Sum_probs=32.7
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCc
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTND 222 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~ 222 (494)
.|..||+++++.......+. .+..+.+. +......+++.+ +..+.|.+||+.+++
T Consensus 191 ~i~i~d~~~~~~~~~~~~~~--------~v~~~~~~--~~~~~~~~l~~~-~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 191 DIKLFDLRNMALRWETNIKN--------GVCSLEFD--RKDISMNKLVAT-SLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEEEEETTTTEEEEEEECSS--------CEEEEEES--CSSSSCCEEEEE-ESTTEEEEEEEEEEE
T ss_pred eEEEEECccCceeeecCCCC--------ceEEEEcC--CCCCCCCEEEEE-CCCCeEEEEeCcCCC
Confidence 78899999998866544333 23333332 100034455554 455789999987754
No 254
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=72.96 E-value=69 Score=30.80 Aligned_cols=221 Identities=9% Similarity=0.065 Sum_probs=106.0
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++++.+.=... -.|..||+.+++.++++.- ....+..+.+.- +..+++ +=
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d--------~~i~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~-----~~~~l~-s~ 199 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQD--------MQLKIWSVKDGSNPRTLIG-------HRATVTDIAIID-----RGRNVL-SA 199 (420)
T ss_dssp CEEEEEECTTSSEEEEEETT--------SEEEEEETTTCCCCEEEEC-------CSSCEEEEEEET-----TTTEEE-EE
T ss_pred ccEEEEECCCCCEEEEEeCC--------CeEEEEeCCCCcCceEEcC-------CCCcEEEEEEcC-----CCCEEE-EE
Confidence 45556666666544421111 1688899998887776642 223444555531 334444 33
Q ss_pred CCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccc--cccccceeeEEeeecCCCCCcEEEEe
Q psy731 208 SGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDY--TEESKFSNMVVDVTSANCDDAFLYIA 284 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~--~~~s~~~~i~VD~~~~~c~~~~~YI~ 284 (494)
+..+.|.+||+.+++..+. ..+..+.++ -..+ .|.-..+... ........+.+. .+..+++..
T Consensus 200 ~~d~~v~iwd~~~~~~~~~~~~~~~~~~~---v~~~------~~~~~~~~~~~~~~~~~v~~~~~s-----~~~~~l~~~ 265 (420)
T 3vl1_A 200 SLDGTIRLWECGTGTTIHTFNRKENPHDG---VNSI------ALFVGTDRQLHEISTSKKNNLEFG-----TYGKYVIAG 265 (420)
T ss_dssp ETTSCEEEEETTTTEEEEEECBTTBTTCC---EEEE------EEEECCCSSCGGGCCCCCCTTCSS-----CTTEEEEEE
T ss_pred cCCCcEEEeECCCCceeEEeecCCCCCCC---ccEE------EEecCCcceeeecccCcccceEEc-----CCCCEEEEE
Confidence 4456799999999876655 211110000 0000 0000000000 000011111111 123444444
Q ss_pred cCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeech
Q psy731 285 DSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTK 363 (494)
Q Consensus 285 D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~ 363 (494)
. .+..|.+||+++++.-...... ....+..++.+|++ ...|+-....+. ++|.+.+.
T Consensus 266 ~-~dg~i~i~d~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~---~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 266 H-VSGVITVHNVFSKEQTIQLPSK------------------FTCSCNSLTVDGNN---ANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp E-TTSCEEEEETTTCCEEEEECCT------------------TSSCEEEEEECSSC---TTEEEEEETTSEEEEEETTCT
T ss_pred c-CCCeEEEEECCCCceeEEcccc------------------cCCCceeEEEeCCC---CCEEEEEeCCCeEEEEEcCCC
Confidence 3 3556899999887643222110 01237778998863 225666555443 55544331
Q ss_pred hhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 364 VLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 364 ~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
.. . .....+..+ .....+... .|.++++--....|..|+...
T Consensus 324 -----~~----~--~~~~~~~~~--~~v~~~~~~--~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 324 -----EC----P--VGEFLINEG--TPINNVYFA--AGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp -----TS----C--SEEEEESTT--SCEEEEEEE--TTEEEEEETTTEEEEEEEECC
T ss_pred -----cC----c--hhhhhccCC--CCceEEEeC--CCCEEEEecCCccEEEEeccC
Confidence 10 0 011122121 223344443 567777777888999999765
No 255
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=72.56 E-value=60 Score=29.93 Aligned_cols=57 Identities=9% Similarity=0.091 Sum_probs=35.2
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
.|..||+.++++++.+.-. .+.+..+.+. .++.+++.+ +..+.|.+||+.+++.-+.
T Consensus 196 ~i~i~d~~~~~~~~~~~~h-------~~~v~~~~~s-----~~~~~l~s~-s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGH-------TGYLNTVTVS-----PDGSLCASG-GKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp CEEEEETTTTEEEEEECCC-------SSCEEEEEEC-----TTSSEEEEE-ETTCEEEEEETTTTEEEEE
T ss_pred EEEEEECCCCceeeEecCC-------CCcEEEEEEC-----CCCCEEEEE-eCCCeEEEEEeccCceeee
Confidence 5778899999888765422 2334444442 133444443 3456899999998776544
No 256
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=71.61 E-value=60 Score=29.57 Aligned_cols=59 Identities=8% Similarity=0.180 Sum_probs=38.9
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
.|..||+.|+++++.+.+.. .......+.... ++.++ +|=+..+.|.+||+.+++.-+.
T Consensus 46 tV~iWd~~tg~~~~~~~~~~-----~~~~V~~v~~~~-----~~~~l-~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQ-----PGEYISSVAWIK-----EGNYL-AVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp EEEEEETTTCCEEEEEECCS-----TTCCEEEEEECT-----TSSEE-EEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEEEecC-----CCCeEEEEEECC-----CCCEE-EEEECCCcEEEeecCCceeEEE
Confidence 57788888888888887655 333444444421 33343 3445567899999999987655
No 257
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=70.16 E-value=81 Score=30.49 Aligned_cols=115 Identities=14% Similarity=0.120 Sum_probs=63.3
Q ss_pred CcEEEEecCCCCeEEEEEcC-CCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-
Q psy731 278 DAFLYIADSGHNHIVVYNYR-TNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST- 355 (494)
Q Consensus 278 ~~~~YI~D~~~~gliVydl~-~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~- 355 (494)
..++... .+..|.+||+. .++.+++.+.. |.. ..+ ....+..++.+|++ .+.|+.....+.
T Consensus 189 ~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~----~~~----~~~----~~~~v~~~~~~p~~---~~~l~s~~~dg~i 251 (447)
T 3dw8_B 189 YETYLSA--DDLRINLWHLEITDRSFNIVDIK----PAN----MEE----LTEVITAAEFHPNS---CNTFVYSSSKGTI 251 (447)
T ss_dssp SSEEEEE--CSSEEEEEETTEEEEEEEEEECC----CSS----GGG----CCCCEEEEEECSSC---TTEEEEEETTSCE
T ss_pred CCEEEEe--CCCeEEEEECCCCCceeeeeecc----ccc----ccc----cCcceEEEEECCCC---CcEEEEEeCCCeE
Confidence 3444444 47789999998 45555543211 000 000 12347889999862 256777666664
Q ss_pred ceEeeechhhcCCCcCccccccceEEec-ccC---------CCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 356 TEFAVTTKVLQNRSLDFSRSNFDFKVMG-SRG---------TGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 356 ~ly~V~T~~L~~~~~~~~~~~~~v~~~G-~~G---------~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
++|.+.+..+.... ++.+. ..+ .......++++ .+|.++++--. ..|..||...
T Consensus 252 ~iwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 252 RLCDMRASALCDRH---------SKLFEEPEDPSNRSFFSEIISSISDVKFS-HSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp EEEETTTCSSSCTT---------CEEECCC-----CCHHHHHTTCEEEEEEC-TTSSEEEEEES-SEEEEEETTC
T ss_pred EEEECcCCccccce---------eeEeccCCCccccccccccCceEEEEEEC-CCCCEEEEeeC-CeEEEEeCCC
Confidence 67766554321111 11111 110 00135577888 57876666666 9999999975
No 258
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=69.20 E-value=81 Score=30.08 Aligned_cols=99 Identities=10% Similarity=0.102 Sum_probs=57.0
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||+.++..++..+.. .+ -...+..++.+|++ +.|.-....++ ++|.+.+...
T Consensus 125 ~D~~v~iwd~~~~~~~~~~~~~------------~~----h~~~v~~~~~~p~~----~~l~s~s~d~~i~~w~~~~~~~ 184 (345)
T 3fm0_A 125 RDKSVWVWEVDEEDEYECVSVL------------NS----HTQDVKHVVWHPSQ----ELLASASYDDTVKLYREEEDDW 184 (345)
T ss_dssp TTSCEEEEEECTTSCEEEEEEE------------CC----CCSCEEEEEECSSS----SCEEEEETTSCEEEEEEETTEE
T ss_pred CCCeEEEEECCCCCCeEEEEEe------------cC----cCCCeEEEEECCCC----CEEEEEeCCCcEEEEEecCCCE
Confidence 4567889999877654432211 00 01236778888862 46666555544 6666543211
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCC
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTF 419 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~ 419 (494)
.......|.. .....++++ .+|.++.+--....|..|+..
T Consensus 185 ----------~~~~~~~~h~---~~v~~l~~s-p~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 185 ----------VCCATLEGHE---STVWSLAFD-PSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp ----------EEEEEECCCS---SCEEEEEEC-TTSSEEEEEETTSCEEEEEEE
T ss_pred ----------EEEEEecCCC---CceEEEEEC-CCCCEEEEEeCCCeEEEeccc
Confidence 0011222332 335578888 678777777788889999863
No 259
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.45 E-value=7.5 Score=42.37 Aligned_cols=67 Identities=19% Similarity=0.415 Sum_probs=45.6
Q ss_pred CCeEEeeCCCCeEEEeccCC---------------------CeEEEEeCCCCccccccce--eeee--------------
Q psy731 391 SGASSLDEETGVIFYALLVK---------------------SGVGCWNTFRGEEYNEKSM--GLVA-------------- 433 (494)
Q Consensus 391 s~g~~~D~~~G~ly~~~~~~---------------------~aI~~w~~~~~~~~~~~~~--~~v~-------------- 433 (494)
.-++.++|.+|.+|++..+. ..|++|+++++ ......+ .+++
T Consensus 386 pEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~-d~~a~~f~w~~~v~~g~p~~~~~~~~~ 464 (592)
T 3zwu_A 386 PEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRD-DHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp EEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGG-CTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred cceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCC-ccccceeEEEEEEeccCcccccccccc
Confidence 45788998899999998753 35999987652 1111111 1111
Q ss_pred -----ecCCeEecccceEEcCCceEEEEec
Q psy731 434 -----EDNATLIYPSDIRVDRTGVLWVLSN 458 (494)
Q Consensus 434 -----~d~~~l~~pd~~~id~~g~Lwvlsn 458 (494)
.+...|.-||.|.+|+.|.|||.+.
T Consensus 465 ~~~~~~~~~~f~~PDNL~fd~~G~LwI~eD 494 (592)
T 3zwu_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTD 494 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEEC
T ss_pred cccccCCCCCccCCcceEECCCCCEEEEec
Confidence 1223578899999999999999974
No 260
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=67.03 E-value=94 Score=30.01 Aligned_cols=32 Identities=9% Similarity=0.108 Sum_probs=23.5
Q ss_pred CCeEEeeCCCCeEEEeccCCCeEEEEeCCCCc
Q psy731 391 SGASSLDEETGVIFYALLVKSGVGCWNTFRGE 422 (494)
Q Consensus 391 s~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~ 422 (494)
...+++++....||.+--....|..|+..++.
T Consensus 270 v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 270 VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 45678885445666666678899999998753
No 261
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=66.01 E-value=1.1e+02 Score=32.67 Aligned_cols=27 Identities=7% Similarity=0.087 Sum_probs=20.6
Q ss_pred CCcEEEEecCCC---CeEEEEEcCCCcEEE
Q psy731 277 DDAFLYIADSGH---NHIVVYNYRTNDSHI 303 (494)
Q Consensus 277 ~~~~~YI~D~~~---~gliVydl~~~~swr 303 (494)
++..||..|..+ ..|.|+|+++++..+
T Consensus 140 g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~ 169 (693)
T 3iuj_A 140 GRILAYSLSLAGSDWREIHLMDVESKQPLE 169 (693)
T ss_dssp SSEEEEEEECSSCCEEEEEEEETTTCSEEE
T ss_pred CCEEEEEEecCCCceEEEEEEECCCCCCCc
Confidence 356789888654 579999999988543
No 262
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=65.13 E-value=85 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=21.4
Q ss_pred CCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 390 QSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 390 qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
....+++. .+|..+++--....|..||..+|
T Consensus 308 ~v~~l~~s-~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 308 QCTSLAWS-ADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp CEEEEEEC-TTSSEEEEEETTSCEEEEEEEC-
T ss_pred CEEEEEEC-CCCCEEEEEeCCCEEEEEeCCCc
Confidence 34556777 57776666667778889987764
No 263
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=64.35 E-value=37 Score=35.45 Aligned_cols=64 Identities=19% Similarity=0.105 Sum_probs=39.4
Q ss_pred CCCCeEEeeCCCCeEEEeccC-----------------CCeEEEEeCCCC-------c----ccccc---ceeeeeecCC
Q psy731 389 SQSGASSLDEETGVIFYALLV-----------------KSGVGCWNTFRG-------E----EYNEK---SMGLVAEDNA 437 (494)
Q Consensus 389 ~qs~g~~~D~~~G~ly~~~~~-----------------~~aI~~w~~~~~-------~----~~~~~---~~~~v~~d~~ 437 (494)
-..+.++++ .+|.||++.=+ ..+|.+.|+++. . ||... ..++.+..
T Consensus 139 H~g~~l~fg-pDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G-- 215 (463)
T 2wg3_C 139 HLGGQLLFG-PDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHG-- 215 (463)
T ss_dssp SCEEEEEEC-TTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEEC--
T ss_pred ccCCcEeEC-CCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEEC--
Confidence 345678999 69999998443 346999999872 1 11100 12344432
Q ss_pred eEecccceEEcCC-----ceEEEE
Q psy731 438 TLIYPSDIRVDRT-----GVLWVL 456 (494)
Q Consensus 438 ~l~~pd~~~id~~-----g~Lwvl 456 (494)
++=|-+|++|++ |.||+-
T Consensus 216 -~RNp~gla~dp~tg~~~G~l~~~ 238 (463)
T 2wg3_C 216 -LHDPGRCAVDRHPTDININLTIL 238 (463)
T ss_dssp -CSSCCBEEEESSCSSTTCSEEEE
T ss_pred -CCCcceEEECCCCCCcccceEEE
Confidence 445888899886 655553
No 264
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=64.08 E-value=34 Score=32.22 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=18.8
Q ss_pred CCcEEEEeeC-------CCCeEEEEEccCCceeEE
Q psy731 199 DNAFLYIADS-------GHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 199 ~~~~vYItDs-------~~~~iIVyd~~~~~~~rv 226 (494)
++..+|+... ....|.++|+.++..+++
T Consensus 24 G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 58 (347)
T 2gop_A 24 GELVAYVLTKANLKDNKYENTIVIENLKNNARRFI 58 (347)
T ss_dssp TTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE
T ss_pred CcEEEEEEeecCcccCCccceEEEEeCCCCceEEc
Confidence 5566676422 245688899988887666
No 265
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=63.17 E-value=1.1e+02 Score=29.50 Aligned_cols=82 Identities=6% Similarity=0.084 Sum_probs=48.0
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECC-CCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLR-QQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~-t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
.|..+...+++++.+. |.. . .|..||+. +++.++.+.+...........+..+...- .+....++
T Consensus 179 ~v~~~~~~~~~~~l~s--~~d--~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-----~~~~~l~s 244 (447)
T 3dw8_B 179 HINSISINSDYETYLS--ADD--L-----RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-----NSCNTFVY 244 (447)
T ss_dssp CCCEEEECTTSSEEEE--ECS--S-----EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-----SCTTEEEE
T ss_pred ceEEEEEcCCCCEEEE--eCC--C-----eEEEEECCCCCceeeeeecccccccccCcceEEEEECC-----CCCcEEEE
Confidence 3556667777776665 222 1 78899999 45666666554422222344445555431 22133344
Q ss_pred eCCCCeEEEEEccCCce
Q psy731 207 DSGHNHIVVYNYRTNDS 223 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~ 223 (494)
=+..+.|.+||+.+++.
T Consensus 245 ~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 245 SSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EETTSCEEEEETTTCSS
T ss_pred EeCCCeEEEEECcCCcc
Confidence 44457899999999885
No 266
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=58.90 E-value=1e+02 Score=28.67 Aligned_cols=17 Identities=35% Similarity=0.542 Sum_probs=11.9
Q ss_pred CCeEEEEEcCCCcEEEE
Q psy731 288 HNHIVVYNYRTNDSHII 304 (494)
Q Consensus 288 ~~gliVydl~~~~swrv 304 (494)
...|.++|+.+++..++
T Consensus 42 ~~~l~~~d~~~~~~~~l 58 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI 58 (347)
T ss_dssp EEEEEEEETTTCCEEEE
T ss_pred cceEEEEeCCCCceEEc
Confidence 35688888888775544
No 267
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=57.70 E-value=2e+02 Score=30.72 Aligned_cols=30 Identities=7% Similarity=0.047 Sum_probs=23.3
Q ss_pred CCCCcEEEEeeCCC---CeEEEEEccCCceeEE
Q psy731 197 NCDNAFLYIADSGH---NHIVVYNYRTNDSHII 226 (494)
Q Consensus 197 ~c~~~~vYItDs~~---~~iIVyd~~~~~~~rv 226 (494)
.+++..||..|.++ ..|.|+|+++|...+.
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~ 170 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVESKQPLET 170 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE
T ss_pred CCCCEEEEEEecCCCceEEEEEEECCCCCCCcc
Confidence 34677899998765 4799999999986544
No 268
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=56.10 E-value=2.1e+02 Score=30.41 Aligned_cols=27 Identities=4% Similarity=0.050 Sum_probs=21.2
Q ss_pred CCCcEEEEeeCCC---CeEEEEEccCCcee
Q psy731 198 CDNAFLYIADSGH---NHIVVYNYRTNDSH 224 (494)
Q Consensus 198 c~~~~vYItDs~~---~~iIVyd~~~~~~~ 224 (494)
+++..||..|.++ ..|.|+|+++|...
T Consensus 131 DG~~la~~~~~~G~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 131 DGKKVAFAQKPNAADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp TSSEEEEEEEETTCSCCEEEEEETTTCCBC
T ss_pred CCCEEEEEECCCCCceEEEEEEECCCCCCc
Confidence 4677888888654 58999999999864
No 269
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=55.31 E-value=1.4e+02 Score=28.27 Aligned_cols=85 Identities=7% Similarity=-0.024 Sum_probs=41.0
Q ss_pred ceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhhcCCCcCccccccceEEecc-cC-CCCCCCeEEeeCCCCeEEEe
Q psy731 330 GIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGS-RG-TGSQSGASSLDEETGVIFYA 406 (494)
Q Consensus 330 Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~-~G-~~~qs~g~~~D~~~G~ly~~ 406 (494)
.|..|+.+|++ +.|.-...-++ ++|.+...--.... .........+.+.. .| .......++.. ..|..+.+
T Consensus 196 ~v~~l~~sp~g----~~l~s~s~D~~v~iW~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-~~~~~l~s 269 (345)
T 3fm0_A 196 TVWSLAFDPSG----QRLASCSDDRTVRIWRQYLPGNEQGV-ACSGSDPSWKCICTLSGFHSRTIYDIAWC-QLTGALAT 269 (345)
T ss_dssp CEEEEEECTTS----SEEEEEETTSCEEEEEEECTTCTTCC-CCC---CEEEEEEEECSSCSSCEEEEEEC-TTTCCEEE
T ss_pred ceEEEEECCCC----CEEEEEeCCCeEEEeccccCCCCccc-eeeccCCccceeEEecCCCCCcEEEEEEe-cCCCEEEE
Confidence 47789998863 56666555554 66665332111100 00000011111111 11 01223356666 45555666
Q ss_pred ccCCCeEEEEeCCC
Q psy731 407 LLVKSGVGCWNTFR 420 (494)
Q Consensus 407 ~~~~~aI~~w~~~~ 420 (494)
--....|..|+.+.
T Consensus 270 ~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 270 ACGDDAIRVFQEDP 283 (345)
T ss_dssp EETTSCEEEEEECT
T ss_pred EeCCCeEEEEEeCC
Confidence 66788899998765
No 270
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=54.64 E-value=2.6e+02 Score=31.14 Aligned_cols=219 Identities=13% Similarity=0.192 Sum_probs=106.0
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+..++++++.+.=.... .|..||..+.+.... ++. ...+..+... + +.++.-++
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg--------~I~lw~~~~~~~~~~--~~~------~~~V~~l~fs--p----g~~L~S~s 76 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTG--------EVHIYGQQQVEVVIK--LED------RSAIKEMRFV--K----GIYLVVIN 76 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTS--------EEEEECSTTCEEEEE--CSS------CCCEEEEEEE--T----TTEEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCCC--------EEEEEeCCCcEEEEE--cCC------CCCEEEEEEc--C----CCEEEEEE
Confidence 466777888888777633222 677888887766543 222 2233334332 1 23444443
Q ss_pred CCCCeEEEEEccCCceeEE-ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcEEEEecC
Q psy731 208 SGHNHIVVYNYRTNDSHII-HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAFLYIADS 286 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv-~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~~YI~D~ 286 (494)
..+.|.|||+.+++.-.. .| ......+.++ .+..++++..
T Consensus 77 -~D~~v~lWd~~~~~~~~~~~~--------------------------------~~~V~~v~~s-----p~g~~l~sgs- 117 (902)
T 2oaj_A 77 -AKDTVYVLSLYSQKVLTTVFV--------------------------------PGKITSIDTD-----ASLDWMLIGL- 117 (902)
T ss_dssp -TTCEEEEEETTTCSEEEEEEC--------------------------------SSCEEEEECC-----TTCSEEEEEE-
T ss_pred -CcCeEEEEECCCCcEEEEEcC--------------------------------CCCEEEEEEC-----CCCCEEEEEc-
Confidence 457899999998865332 11 0112223332 1345666665
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcc---cCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCcceEeeech
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLH---FDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTK 363 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~---~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~ 363 (494)
.+..|.+||+++++.-.+.-+... ..+ .| -...|..|+.+|++ .+.|....-.+.-+|.+.+.
T Consensus 118 ~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~-------~~----h~~~V~sl~~sp~~---~~~l~~g~~dg~vlWd~~~~ 183 (902)
T 2oaj_A 118 QNGSMIVYDIDRDQLSSFKLDNLQKSSFFP-------AA----RLSPIVSIQWNPRD---IGTVLISYEYVTLTYSLVEN 183 (902)
T ss_dssp TTSCEEEEETTTTEEEEEEECCHHHHHTCS-------SS----CCCCCCEEEEETTE---EEEEEEECSSCEEEEETTTT
T ss_pred CCCcEEEEECCCCccccceecccccccccc-------cc----CCCCeEEEEEccCC---CCEEEEEeCCCcEEEECCCC
Confidence 356788999998864211100000 000 00 01346667777742 23344333333223333221
Q ss_pred hhcCCCcCcc----ccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCcc
Q psy731 364 VLQNRSLDFS----RSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEE 423 (494)
Q Consensus 364 ~L~~~~~~~~----~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~ 423 (494)
.... .+... .....-...-.++.......+++. .+|.++.+--....|..||..+|++
T Consensus 184 ~~~~-~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs-pdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 184 EIKQ-SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH-PNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEEE-EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC-TTSSEEEEEETTCCEEEEETTTCCE
T ss_pred ceEE-EEecccCCcCCCcccccccccccCCCeEEEEEc-CCCCEEEEEECCCeEEEEECCCCcE
Confidence 1100 00000 000000000000001234567787 5788888888889999999977533
No 271
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=52.90 E-value=18 Score=39.35 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=44.5
Q ss_pred CCCCeEEeeCCCCeEEE-eccC-----------CCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCc-eEEE
Q psy731 389 SQSGASSLDEETGVIFY-ALLV-----------KSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTG-VLWV 455 (494)
Q Consensus 389 ~qs~g~~~D~~~G~ly~-~~~~-----------~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g-~Lwv 455 (494)
...+.+++| +.|+||| +|.. .+.|+|.++.+| + +..++.. +...-|.|+.+.+|+ .|||
T Consensus 476 nsPDnL~fd-~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tG-e-----l~~fl~~-P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 476 NSPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATG-E-----IRRFMVG-PIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CCEEEEEEC-TTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTC-C-----EEEEEEC-CTTCEEEEEEECTTSSEEEE
T ss_pred CCCCceEEC-CCCCEEEEeCCCcCccccccccCCceEEEEeCCCC-e-----EEEEEeC-CCCccccCCEECCCCCEEEE
Confidence 446789999 7999999 7653 569999999764 2 3455554 334568999998888 5676
Q ss_pred Ee
Q psy731 456 LS 457 (494)
Q Consensus 456 ls 457 (494)
..
T Consensus 548 ~v 549 (592)
T 4a9v_A 548 GI 549 (592)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 272
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=52.84 E-value=1.4e+02 Score=27.52 Aligned_cols=30 Identities=3% Similarity=-0.029 Sum_probs=21.9
Q ss_pred CCeEEeeCCC--CeEEEeccCCCeEEEEeCCC
Q psy731 391 SGASSLDEET--GVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 391 s~g~~~D~~~--G~ly~~~~~~~aI~~w~~~~ 420 (494)
...++..|.. |.++.+--....|..||.++
T Consensus 207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred eEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 4567777432 57777777888999999876
No 273
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=52.64 E-value=38 Score=36.72 Aligned_cols=54 Identities=11% Similarity=0.151 Sum_probs=37.8
Q ss_pred CCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceE-EEeecCCCCCcEEEEeeCC
Q psy731 153 EQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMV-VDVTSANCDNAFLYIADSG 209 (494)
Q Consensus 153 ~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~v-VD~~~~~c~~~~vYItDs~ 209 (494)
...+.|.++|+.|+.+++++..+. .....+.|..++ +|. ..+-.-.+||..|.+
T Consensus 220 ~~~~~Lyv~d~~tG~li~~i~~~~--~~~~~~Gls~~~~~D~-d~Dg~~D~~YaGDl~ 274 (570)
T 3hx6_A 220 NDKAALLIIDMETGAITRKLEVTG--RTGVPNGLSSPRLADN-NSDGVADYAYAGDLQ 274 (570)
T ss_dssp TCCEEEEEEETTTCCEEEEEEECC--STTSCCCEEEEEEECT-TSSSBCCEEEEEETT
T ss_pred CCccEEEEEECCCCceEEEEecCC--CCccCCccccceEEec-CCCCceeEEEEEeCC
Confidence 456799999999999999998875 222345666666 553 122224789999975
No 274
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=52.09 E-value=2e+02 Score=29.06 Aligned_cols=79 Identities=9% Similarity=0.122 Sum_probs=56.4
Q ss_pred EcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccce--EEEeecCCCCCcEEEEeeCCCC
Q psy731 134 SDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNM--VVDVTSANCDNAFLYIADSGHN 211 (494)
Q Consensus 134 iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~--vVD~~~~~c~~~~vYItDs~~~ 211 (494)
.|...-|..++.-.. .-.|..|||++.+++++|.|..+ +...+..+ .+.+. ....+||++-...
T Consensus 36 ~~~k~yL~~~N~~~~------~~~i~~iDL~~~kl~k~i~~ekE----GPNgi~~~~~~~~i~----~~DsI~i~~~~~~ 101 (369)
T 3s9j_A 36 ENGKEYLHFENTQKS------LYDIVIFDIENQQIAKRIPLHKT----GPNGLPAVFGSRPSP----DSQYILVAQNNIS 101 (369)
T ss_dssp ETTEEEEEEEECSTT------CCEEEEEETTTTEEEEEEECBSS----STTBCTTCCCEEESS----STTSEEEEEGGGT
T ss_pred cCCcEEEEEeCCCCC------cCcEEEEECCCCceeeeeccccC----CCCCcccceeeEEec----CCCEEEEEeCCcc
Confidence 444445666665332 01799999999999999999874 33333333 23221 4678999999999
Q ss_pred eEEEEEccCCceeEE
Q psy731 212 HIVVYNYRTNDSHII 226 (494)
Q Consensus 212 ~iIVyd~~~~~~~rv 226 (494)
+|..+|.......++
T Consensus 102 ~i~l~n~~G~~~~k~ 116 (369)
T 3s9j_A 102 RLSSINSQGEIIRNY 116 (369)
T ss_dssp EEEEECTTCCEEEEE
T ss_pred eEEEECCCceEEEEE
Confidence 999999999998888
No 275
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=51.63 E-value=1.8e+02 Score=28.37 Aligned_cols=53 Identities=11% Similarity=0.246 Sum_probs=31.8
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCcee
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSH 224 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~ 224 (494)
.|..||+.+++.++++.-.. .....+..+ +.++ ++=+..+.|.|||+.++...
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~-------~~v~~~~~~-------~~~l-~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHT-------ALVGLLRLS-------DKFL-VSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp CEEEEETTTTEEEEEECCCS-------SCEEEEEEC-------SSEE-EEEETTSEEEEEETTTCCEE
T ss_pred cEEEEECCCCcEEEEEeCCC-------CcEEEEEEc-------CCEE-EEEeCCCcEEEEECCCCcee
Confidence 57788888888877664322 233333332 2333 33344567999999887643
No 276
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=50.98 E-value=1.8e+02 Score=28.13 Aligned_cols=175 Identities=13% Similarity=0.186 Sum_probs=0.0
Q ss_pred EeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeC
Q psy731 129 VVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADS 208 (494)
Q Consensus 129 V~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs 208 (494)
|..+...+++++.+.=.... .|..||+++++.++++.++. .+.+..+.+.. .-..++...++=+
T Consensus 217 v~~~~~s~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~~~--~~s~~~~~l~s~~ 280 (437)
T 3gre_A 217 VSSICIDEECCVLILGTTRG--------IIDIWDIRFNVLIRSWSFGD------HAPITHVEVCQ--FYGKNSVIVVGGS 280 (437)
T ss_dssp EEEEEECTTSCEEEEEETTS--------CEEEEETTTTEEEEEEBCTT------CEEEEEEEECT--TTCTTEEEEEEES
T ss_pred eEEEEECCCCCEEEEEcCCC--------eEEEEEcCCccEEEEEecCC------CCceEEEEecc--ccCCCccEEEEEc
Q ss_pred CCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeeccccccc---------------------------cc
Q psy731 209 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYT---------------------------EE 261 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~---------------------------~~ 261 (494)
..+.|.+||+.+++.-+. +. ..
T Consensus 281 ~dg~i~iwd~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 329 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYA-------------------------------FINSDEQPSMEHFLPIEKGLEELNFCGIRSL 329 (437)
T ss_dssp TTEEEEEEETTTTEEEEE-------------------------------EESSSSCCCGGGGSCBCSSGGGCCCCCCCSG
T ss_pred CCCcEEEEEcCCCcEEEE-------------------------------EEcCCCCCccceecccccccccceecccccC
Q ss_pred ccceeeEEeeecCCCCCcEEEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEee---------------
Q psy731 262 SKFSNMVVDVTSANCDDAFLYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQ--------------- 326 (494)
Q Consensus 262 s~~~~i~VD~~~~~c~~~~~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~--------------- 326 (494)
.....+.++ +.-..++-..+..|.+||+++++.-+.........-......+....-.
T Consensus 330 ~~v~~l~~~-------~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (437)
T 3gre_A 330 NALSTISVS-------NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDD 402 (437)
T ss_dssp GGGCCEEEE-------TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC---------
T ss_pred CceEEEEEC-------CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCc
Q ss_pred ---eecceeeeeeccCCCCCceeEEEeeCCCc-ceEe
Q psy731 327 ---WQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFA 359 (494)
Q Consensus 327 ---~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~ 359 (494)
..+.|..|+++++ ++...|.-..-.+. ++|+
T Consensus 403 ~~~h~~~I~~i~~~~~--~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 403 SLYHHDIINSISTCEV--DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----CCCEEEEEEEES--SSSEEEEEEETTSCEEEEC
T ss_pred ccccccceeeEeeecc--CCceEEEEEcCCceEEEeC
No 277
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=50.44 E-value=1.9e+02 Score=28.19 Aligned_cols=59 Identities=8% Similarity=0.185 Sum_probs=39.7
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
.|..||+.|+++++.+.+.. ....+..+... .++.++.+. +..+.|.+||+.+++.-+.
T Consensus 126 tV~lWd~~tg~~~~~~~~~~-----~~~~V~sv~fs-----pdg~~lasg-s~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQ-----PGEYISSVAWI-----KEGNYLAVG-TSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp EEEEEETTTCCEEEEEECCS-----TTCCEEEEEEC-----TTSSEEEEE-ETTSCEEEEETTTTEEEEE
T ss_pred EEEEEECCCCCEEEEEEecC-----CCCcEEEEEEC-----CCCCEEEEE-ECCCeEEEEEcCCCcEEEE
Confidence 68888999999888887765 33444555542 134454443 4457799999999876555
No 278
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=49.82 E-value=1.7e+02 Score=27.40 Aligned_cols=29 Identities=7% Similarity=-0.050 Sum_probs=19.4
Q ss_pred CeEEeeCCC---CeEEEeccCCCeEEEEeCCC
Q psy731 392 GASSLDEET---GVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 392 ~g~~~D~~~---G~ly~~~~~~~aI~~w~~~~ 420 (494)
..++..|.. +.++.+--....|..|+.+.
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred EEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 445665322 36667777788899999865
No 279
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=49.74 E-value=48 Score=36.09 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=50.9
Q ss_pred CCceEEeeEEEcCCCeEEE-EeCCCCCC---CCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCC
Q psy731 124 RNLTSVVKVQSDPCDRLWA-LDSGVVEG---KMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCD 199 (494)
Q Consensus 124 ~~lvsV~~i~iD~~~~Lwv-lD~G~~~~---~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~ 199 (494)
+.|.|+-.+.+|+.|.||+ =|.+.... ...+...+.+++..++++.+...-|. .+.++.+.+. .+
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~------~aEpnGiafS-----PD 541 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI------GCEVTGISFS-----PD 541 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT------TCEEEEEEEC-----TT
T ss_pred CccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC------CccccCCEEC-----CC
Confidence 4699999999999999999 79765421 12345589999999999877554443 3445666653 25
Q ss_pred CcEEEEe
Q psy731 200 NAFLYIA 206 (494)
Q Consensus 200 ~~~vYIt 206 (494)
..++||+
T Consensus 542 ~ktLfV~ 548 (592)
T 4a9v_A 542 QKTLFVG 548 (592)
T ss_dssp SSEEEEE
T ss_pred CCEEEEE
Confidence 6677765
No 280
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=49.65 E-value=1.8e+02 Score=27.78 Aligned_cols=56 Identities=13% Similarity=-0.011 Sum_probs=33.5
Q ss_pred CCCe-EEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeech
Q psy731 287 GHNH-IVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTK 363 (494)
Q Consensus 287 ~~~g-liVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~ 363 (494)
.+.. |.+||+++++.-+......+ ...+..++.+|+ ++.|.-....++ ++|.+...
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~g~h-----------------~~~v~~~~~s~~----~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRRGLD-----------------RADVVDMKWSTD----GSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEECTTC-----------------CSCEEEEEECTT----SCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCC-----------------CCcEEEEEECCC----CCEEEEEECCCEEEEEEccCC
Confidence 3454 88999997764332211001 134778999986 356666666554 77777554
No 281
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=48.04 E-value=1.8e+02 Score=27.36 Aligned_cols=202 Identities=12% Similarity=0.130 Sum_probs=0.0
Q ss_pred EeeEEE-----cC-CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcE
Q psy731 129 VVKVQS-----DP-CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAF 202 (494)
Q Consensus 129 V~~i~i-----D~-~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~ 202 (494)
|..+.. .. ++++.+-=.... .|..||+.+++....+..+...+......+..+.+. .++.
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~--------~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~------~~~~ 89 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDK--------TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALS------QENC 89 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTS--------CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEEC------SSTT
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCC--------EEEEEECCcCCcccccccccchhccCCCceEEEEEC------CCCC
Q ss_pred EEEeeCCCCeEEEEEccCCceeEE--ecCccccCCCCCccccCCccceeeeecccccccccccceeeEEeeecCCCCCcE
Q psy731 203 LYIADSGHNHIVVYNYRTNDSHII--HHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNMVVDVTSANCDDAF 280 (494)
Q Consensus 203 vYItDs~~~~iIVyd~~~~~~~rv--~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i~VD~~~~~c~~~~ 280 (494)
..+|=+..+.|.+||+.+++..+. .|... ...+.+.. ++-
T Consensus 90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~--------------------------------v~~v~~sp------~~~ 131 (343)
T 2xzm_R 90 FAISSSWDKTLRLWDLRTGTTYKRFVGHQSE--------------------------------VYSVAFSP------DNR 131 (343)
T ss_dssp EEEEEETTSEEEEEETTSSCEEEEEECCCSC--------------------------------EEEEEECS------STT
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCCc--------------------------------EEEEEECC------CCC
Q ss_pred EEEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCc----------eeEEEe
Q psy731 281 LYIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNF----------RVMYFH 350 (494)
Q Consensus 281 ~YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~----------r~LYf~ 350 (494)
..++=..+..|.+||+............-+.++ +..++.+|+ . ..|.-.
T Consensus 132 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-----------------v~~~~~~~~----~~~~~~~~~~~~~l~s~ 190 (343)
T 2xzm_R 132 QILSAGAEREIKLWNILGECKFSSAEKENHSDW-----------------VSCVRYSPI----MKSANKVQPFAPYFASV 190 (343)
T ss_dssp EEEEEETTSCEEEEESSSCEEEECCTTTSCSSC-----------------EEEEEECCC----CCSCSCCCSSCCEEEEE
T ss_pred EEEEEcCCCEEEEEeccCCceeeeecccCCCce-----------------eeeeeeccc----cccccccCCCCCEEEEE
Q ss_pred eCCCc-ceEeeechhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 351 PLAST-TEFAVTTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 351 plss~-~ly~V~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
...++ ++|......+ ....+.. .....+++. .+|.++.+--....|..||...
T Consensus 191 ~~d~~i~iwd~~~~~~-------------~~~~~h~---~~v~~~~~s-~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 191 GWDGRLKVWNTNFQIR-------------YTFKAHE---SNVNHLSIS-PNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp ETTSEEEEEETTTEEE-------------EEEECCS---SCEEEEEEC-TTSSEEEEEETTCEEEEEESSC
T ss_pred cCCCEEEEEcCCCcee-------------EEEcCcc---ccceEEEEC-CCCCEEEEEcCCCeEEEEECCC
No 282
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=46.96 E-value=26 Score=38.36 Aligned_cols=120 Identities=18% Similarity=0.220 Sum_probs=70.4
Q ss_pred eeeeeeccCCCCCceeEEEeeCCCcceEeeechhhc----CCCcCc-cccccceEEecccCCCCCCCeEEeeCCCCeEEE
Q psy731 331 IHGMSLSPLTRDNFRVMYFHPLASTTEFAVTTKVLQ----NRSLDF-SRSNFDFKVMGSRGTGSQSGASSLDEETGVIFY 405 (494)
Q Consensus 331 i~gIaLsp~~~~g~r~LYf~plss~~ly~V~T~~L~----~~~~~~-~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~ 405 (494)
-.|+-++|+ ++.+|..-.-|.+..-++.+-+. ++-+.. +.+..+++ +| .|| -=.++| ..|+.|-
T Consensus 325 PHGv~vsPD----Gkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G-lGP----lHt~Fd-~~G~aYT 393 (638)
T 3sbq_A 325 PHGCNTSSD----GKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG-LGP----LHTTFD-GRGNAYT 393 (638)
T ss_dssp CCCEEECTT----SCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC-SCE----EEEEEC-SSSEEEE
T ss_pred CcceeeCCC----CCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC-Ccc----cEEEEC-CCCceEe
Confidence 467888887 38999977777777777766443 222111 22233444 44 332 235889 7999999
Q ss_pred eccCCCeEEEEeCCCCc-cccccceeeeeecCCeEec-ccceE------EcCCceEEEEecCchh
Q psy731 406 ALLVKSGVGCWNTFRGE-EYNEKSMGLVAEDNATLIY-PSDIR------VDRTGVLWVLSNKLPV 462 (494)
Q Consensus 406 ~~~~~~aI~~w~~~~~~-~~~~~~~~~v~~d~~~l~~-pd~~~------id~~g~Lwvlsnrl~~ 462 (494)
++.-.+.|.+||.++.. .|+-+....|.+- -...| |-.+. .+.+|.-.|.-|+|-+
T Consensus 394 tlfidSqvvkWni~~a~~~~~g~~~~~v~~k-~dv~YqpGH~~~~~get~~~dGk~lv~lnK~sk 457 (638)
T 3sbq_A 394 TLFIDSQVVKWNMEEAVRAYKGEKVNYIKQK-LDVHYQPGHLHASLCETNEADGKWLVALSKFSK 457 (638)
T ss_dssp EETTTTEEEEEEHHHHHHHHTTCCCCCEEEE-EECSSCEEEEEETTTTSTTCCSCEEEEEESCCT
T ss_pred eeeecceEEEEeccHHHHHhcCccCCeeeec-cccccCCcccccCCCccCCCCccEEEEeccccc
Confidence 99999999999986510 1322333233321 11112 22232 2568876666688764
No 283
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=46.79 E-value=1.7e+02 Score=26.78 Aligned_cols=78 Identities=13% Similarity=0.177 Sum_probs=45.1
Q ss_pred EEeeEEEcCC---CeEEEEeCCCCCCCCCCCCEEEEEECCC-CcEE-EEEEcCCCccccccCCccceEEEeecCCCCCcE
Q psy731 128 SVVKVQSDPC---DRLWALDSGVVEGKMEQPPSVQVYDLRQ-QMQI-RFFQLKEKTDYTEESKFSNMVVDVTSANCDNAF 202 (494)
Q Consensus 128 sV~~i~iD~~---~~LwvlD~G~~~~~~~~~Pklv~~dl~t-~~vi-~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~ 202 (494)
.|..+...++ +++.+.=.... .|..||+.+ ++.+ +.+.- ....+..+.+. .+..+
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~-------h~~~v~~~~~~-----~~~~~ 100 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWAN--------DVRCWEVQDSGQTIPKAQQM-------HTGPVLDVCWS-----DDGSK 100 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTS--------EEEEEEECTTSCEEEEEEEE-------CSSCEEEEEEC-----TTSSE
T ss_pred ceEEEEEcCCCCCceEEEEECCCC--------cEEEEEcCCCCceeEEEecc-------ccCCEEEEEEC-----cCCCE
Confidence 4555666666 35544422222 688889987 5544 33332 22334444442 24455
Q ss_pred EEEeeCCCCeEEEEEccCCceeEE
Q psy731 203 LYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 203 vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
++.+. ..+.|.+||+.++...++
T Consensus 101 l~s~~-~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 101 VFTAS-CDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp EEEEE-TTSEEEEEETTTTEEEEE
T ss_pred EEEEc-CCCcEEEEEcCCCCceee
Confidence 55543 457899999999987766
No 284
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=45.98 E-value=43 Score=33.00 Aligned_cols=66 Identities=8% Similarity=0.014 Sum_probs=39.7
Q ss_pred CCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEE
Q psy731 137 CDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVY 216 (494)
Q Consensus 137 ~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVy 216 (494)
.++|++-.... .|.++|++|++++.++.... ....+++ .++.+|++.+..+.|.++
T Consensus 9 ~~~v~~gs~dg---------~v~a~d~~tG~~~W~~~~~~--------~~s~p~~-------~~g~~~v~~s~dg~l~a~ 64 (369)
T 2hz6_A 9 ETLLFVSTLDG---------SLHAVSKRTGSIKWTLKEDP--------VLQVPTH-------VEEPAFLPDPNDGSLYTL 64 (369)
T ss_dssp TTEEEEEETTS---------EEEEEETTTCCEEEEEECCC--------SCCCC------------CCEEECTTTCCEEEC
T ss_pred CCEEEEEcCCC---------EEEEEECCCCCEEEEecCCC--------ceecceE-------cCCCEEEEeCCCCEEEEE
Confidence 56777764321 69999999999998887622 1122333 234578887888899999
Q ss_pred EccCCc-eeEE
Q psy731 217 NYRTND-SHII 226 (494)
Q Consensus 217 d~~~~~-~~rv 226 (494)
|.++|+ .|+.
T Consensus 65 d~~tG~~~w~~ 75 (369)
T 2hz6_A 65 GSKNNEGLTKL 75 (369)
T ss_dssp -----CCSEEC
T ss_pred ECCCCceeeee
Confidence 998876 4666
No 285
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=44.96 E-value=2e+02 Score=26.86 Aligned_cols=105 Identities=9% Similarity=-0.005 Sum_probs=53.6
Q ss_pred CCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechhh
Q psy731 287 GHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKVL 365 (494)
Q Consensus 287 ~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~L 365 (494)
.+..|.+||+.++..|+..+.... -...|..++.+|++....+.|.-...-++ ++|.+.+..-
T Consensus 187 ~D~~v~lWd~~~~~~~~~~~~l~~----------------h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 187 CDNLIKLWKEEEDGQWKEEQKLEA----------------HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS 250 (316)
T ss_dssp TTSBCCEEEECTTSCEEEEECCBC----------------CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC
T ss_pred CCCeEEEEEeCCCCccceeeeccc----------------CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc
Confidence 356678999877665654432111 01236778888863111234544444443 5555543110
Q ss_pred cCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCC
Q psy731 366 QNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTF 419 (494)
Q Consensus 366 ~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~ 419 (494)
.. ...+.+... ....-.++.. .+|.+..+--....|..|+..
T Consensus 251 --~~-------~~~~~~~~~--~~~v~~v~~s-p~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 251 --NT-------WSPKLLHKF--NDVVWHVSWS-ITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp --CC-------CBCCEEEEC--SSCEEEEEEC-TTTCCEEEEESSSCEEEEEEC
T ss_pred --cc-------hhhhhhhcC--CCcEEEEEEc-CCCCEEEEEcCCCeEEEEEEC
Confidence 00 000111111 1223456777 567666666677889999875
No 286
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=41.39 E-value=3.6e+02 Score=28.83 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=43.8
Q ss_pred CEEEEEECCCCcEEEEEEcCCCccc-------------------------------cccCCccceEEEeecCCCCCcEEE
Q psy731 156 PSVQVYDLRQQMQIRFFQLKEKTDY-------------------------------TEESKFSNMVVDVTSANCDNAFLY 204 (494)
Q Consensus 156 Pklv~~dl~t~~vi~~~~lp~~~~~-------------------------------~~~S~l~d~vVD~~~~~c~~~~vY 204 (494)
-.|.+||.+|++++-++........ ...+.-..+++|. ..+.||
T Consensus 182 g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-----~~g~vy 256 (599)
T 1w6s_A 182 GYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-----GTNLIY 256 (599)
T ss_dssp CEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-----TTTEEE
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeC-----CCCEEE
Confidence 3799999999999988887542100 0001112456664 567899
Q ss_pred EeeCC---------------CCeEEEEEccCCce-eEE
Q psy731 205 IADSG---------------HNHIVVYNYRTNDS-HII 226 (494)
Q Consensus 205 ItDs~---------------~~~iIVyd~~~~~~-~rv 226 (494)
+.-.. ..+|+.+|.++|+. |++
T Consensus 257 ~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~ 294 (599)
T 1w6s_A 257 FGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY 294 (599)
T ss_dssp EECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE
T ss_pred EeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe
Confidence 87543 24899999999976 555
No 287
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=40.73 E-value=2.5e+02 Score=26.75 Aligned_cols=63 Identities=13% Similarity=0.185 Sum_probs=36.0
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEee----------------cCCCCCcEEEEeeCCCCeEEEEEccC
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVT----------------SANCDNAFLYIADSGHNHIVVYNYRT 220 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~----------------~~~c~~~~vYItDs~~~~iIVyd~~~ 220 (494)
.|..||+++++.++.+..+.. ....+..+.+-.. ....+..+++.+ +..+.|.+||+.+
T Consensus 204 ~v~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 204 TIRLWECGTGTTIHTFNRKEN----PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG-HVSGVITVHNVFS 278 (420)
T ss_dssp CEEEEETTTTEEEEEECBTTB----TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE-ETTSCEEEEETTT
T ss_pred cEEEeECCCCceeEEeecCCC----CCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE-cCCCeEEEEECCC
Confidence 588899999999988875431 2222233322100 001133445444 3456799999988
Q ss_pred Ccee
Q psy731 221 NDSH 224 (494)
Q Consensus 221 ~~~~ 224 (494)
++.-
T Consensus 279 ~~~~ 282 (420)
T 3vl1_A 279 KEQT 282 (420)
T ss_dssp CCEE
T ss_pred Ccee
Confidence 8753
No 288
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=40.27 E-value=2e+02 Score=30.31 Aligned_cols=24 Identities=38% Similarity=0.552 Sum_probs=18.4
Q ss_pred cEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 201 AFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 201 ~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
.++|.+ ..+.|.+||+++|...++
T Consensus 28 ~~~~~~--~d~~i~~~~~~~g~~~~~ 51 (719)
T 1z68_A 28 EYLHQS--ADNNIVLYNIETGQSYTI 51 (719)
T ss_dssp EEEEEC--TTSCEEEEESSSCCEEEE
T ss_pred eEEEEc--CCCCEEEEEcCCCcEEEE
Confidence 455544 356899999999998887
No 289
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=40.12 E-value=2.1e+02 Score=25.68 Aligned_cols=53 Identities=9% Similarity=0.091 Sum_probs=33.4
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCc
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTND 222 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~ 222 (494)
.|..||+.+++..+.+.... +.+..+.+.. +..+++.+. ..+.|.+||+.+..
T Consensus 40 ~v~vw~~~~~~~~~~~~~~~-------~~v~~~~~~~-----~~~~l~~~~-~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTGQ-------GFLNSVCYDS-----EKELLLFGG-KDTMINGVPLFATS 92 (313)
T ss_dssp EEEEEEESSSEEEEEEEECS-------SCEEEEEEET-----TTTEEEEEE-TTSCEEEEETTCCT
T ss_pred cEEEEECCCCEEEEEeecCC-------ccEEEEEECC-----CCCEEEEec-CCCeEEEEEeeecC
Confidence 68889999888877665433 3444555432 344555544 35678888887654
No 290
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=39.70 E-value=2.1e+02 Score=25.73 Aligned_cols=30 Identities=10% Similarity=0.252 Sum_probs=22.6
Q ss_pred CCCeEEeeCCCCeEEEeccCCCeEEEEeCCC
Q psy731 390 QSGASSLDEETGVIFYALLVKSGVGCWNTFR 420 (494)
Q Consensus 390 qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~ 420 (494)
.-..+++. .+|.++++--....|..||...
T Consensus 286 ~V~~l~~s-pdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 286 RVLSLTMS-PDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CEEEEEEC-TTSSCEEEEETTTEEEEECCSC
T ss_pred CEEEEEEc-CCCCEEEEEecCCeEEEEECCC
Confidence 34567887 6787777777788899999754
No 291
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=37.32 E-value=2.3e+02 Score=25.43 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=22.3
Q ss_pred CCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 389 SQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 389 ~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.....+++. .+|.++++--....|..|+...+
T Consensus 307 ~~v~~~~~s-~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 307 GEVWSVSWN-LTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp SCEEEEEEC-SSSCCEEEEETTSCEEEEEECTT
T ss_pred ccEEEEEEc-CCCCEEEEecCCCcEEEEecCcC
Confidence 345567777 56766666667778888988763
No 292
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=34.05 E-value=3.3e+02 Score=26.33 Aligned_cols=32 Identities=6% Similarity=-0.011 Sum_probs=20.8
Q ss_pred CCCeEEeeCCCCeEEEec-cCCCeEEEEeCCCC
Q psy731 390 QSGASSLDEETGVIFYAL-LVKSGVGCWNTFRG 421 (494)
Q Consensus 390 qs~g~~~D~~~G~ly~~~-~~~~aI~~w~~~~~ 421 (494)
+...+...+..+.|+.+- ...+.|..||..++
T Consensus 322 ~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 322 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred ceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 344556664455555543 36788999998874
No 293
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=32.70 E-value=4.6e+02 Score=27.60 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=32.9
Q ss_pred CeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeEecccceEEcCCceEEEEe
Q psy731 392 GASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVDRTGVLWVLS 457 (494)
Q Consensus 392 ~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id~~g~Lwvls 457 (494)
+.+++ ..|.+|++.. ...+.++|.++|+++-. +.+ ... ....-+....+|.+||.+
T Consensus 491 g~~~t--agglvf~g~~-dg~l~A~D~~tG~~lW~--~~~----~~g-~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 491 GVLAT--AGNLVFTGTG-DGYFKAFDAKSGKELWK--FQT----GSG-IVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp CCEEE--TTTEEEEECT-TSEEEEEETTTCCEEEE--EEC----SSC-CCSCCEEEEETTEEEEEE
T ss_pred cceEe--CCCEEEEECC-CCcEEEEECCCCCEEEE--ecC----CCC-cccCceEEEECCEEEEEE
Confidence 33444 5889999865 57899999988743210 111 111 122224444688888885
No 294
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=30.95 E-value=3.8e+02 Score=26.00 Aligned_cols=212 Identities=12% Similarity=0.132 Sum_probs=103.8
Q ss_pred EEeeEEEcCCCeEEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEee
Q psy731 128 SVVKVQSDPCDRLWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIAD 207 (494)
Q Consensus 128 sV~~i~iD~~~~LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItD 207 (494)
.|..+...+++.|..-.... .|..||+.+++.++++.- ..+.+..+.+.. ..++...++=
T Consensus 164 ~V~~l~~~~~~~l~s~s~dg---------~i~vwd~~~~~~~~~~~~-------h~~~v~~l~~~~----~~~~~~l~s~ 223 (464)
T 3v7d_B 164 GVWALKYAHGGILVSGSTDR---------TVRVWDIKKGCCTHVFEG-------HNSTVRCLDIVE----YKNIKYIVTG 223 (464)
T ss_dssp CEEEEEECSTTEEEEEETTS---------CEEEEETTTTEEEEEECC-------CSSCEEEEEEEE----SSSCEEEEEE
T ss_pred CEEEEEEcCCCEEEEEeCCC---------CEEEEECCCCcEEEEECC-------CCCccEEEEEec----CCCCCEEEEE
Confidence 34455555555444333221 588899999998876642 223444444432 1233344444
Q ss_pred CCCCeEEEEEccCCceeEEecCccccCCCCCccccCCccceeeeecccc-----ccc-ccccceeeEEeeecCCCCCcEE
Q psy731 208 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKT-----DYT-EESKFSNMVVDVTSANCDDAFL 281 (494)
Q Consensus 208 s~~~~iIVyd~~~~~~~rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~-----~~~-~~s~~~~i~VD~~~~~c~~~~~ 281 (494)
+..+.|.+||+.++..-....... .....+..++.. ... .......+.. +..++
T Consensus 224 s~d~~i~vwd~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~l 283 (464)
T 3v7d_B 224 SRDNTLHVWKLPKESSVPDHGEEH-------------DYPLVFHTPEENPYFVGVLRGHMASVRTVSG-------HGNIV 283 (464)
T ss_dssp ETTSCEEEEECCCCCCC------C-------------CSSEEESCGGGCTTEEEEECCCSSCEEEEEE-------ETTEE
T ss_pred cCCCcEEEeeCCCCcccccccccC-------------CcceEeeccCCCeEEEEEccCccceEEEEcC-------CCCEE
Confidence 556789999999876533211000 000000000000 000 0011111111 13444
Q ss_pred EEecCCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEee
Q psy731 282 YIADSGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAV 360 (494)
Q Consensus 282 YI~D~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V 360 (494)
+... .+..|.+||+.+++.-+.... ....+..++++|+ ++.|+-....+. ++|.+
T Consensus 284 ~~~~-~d~~i~vwd~~~~~~~~~~~~-------------------~~~~v~~~~~~~~----~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 284 VSGS-YDNTLIVWDVAQMKCLYILSG-------------------HTDRIYSTIYDHE----RKRCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEE-TTSCEEEEETTTTEEEEEECC-------------------CSSCEEEEEEETT----TTEEEEEETTSCEEEEET
T ss_pred EEEe-CCCeEEEEECCCCcEEEEecC-------------------CCCCEEEEEEcCC----CCEEEEEeCCCcEEEEEC
Confidence 4443 356789999987765333211 0134777888886 256766666554 56655
Q ss_pred echhhcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 361 TTKVLQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 361 ~T~~L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.+..+ ..+..|.. .....++++ |..+++--....|..||..++
T Consensus 340 ~~~~~------------~~~~~~h~---~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 340 ENGEL------------MYTLQGHT---ALVGLLRLS---DKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp TTTEE------------EEEECCCS---SCEEEEEEC---SSEEEEEETTSEEEEEETTTC
T ss_pred CCCcE------------EEEEeCCC---CcEEEEEEc---CCEEEEEeCCCcEEEEECCCC
Confidence 43211 01111222 223445554 455666667788999999873
No 295
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=27.93 E-value=4.2e+02 Score=25.62 Aligned_cols=55 Identities=15% Similarity=0.185 Sum_probs=31.9
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
.|..||+.+++.++++.-.. .....+.. +..+++.+. ..+.|.+||+.+++.-+.
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~-------~~v~~~~~-------~~~~l~~~~-~d~~i~i~d~~~~~~~~~ 314 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHT-------NRVYSLQF-------DGIHVVSGS-LDTSIRVWDVETGNCIHT 314 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCS-------SCEEEEEE-------CSSEEEEEE-TTSCEEEEETTTCCEEEE
T ss_pred EEEEEECCCCcEeEEecCCC-------CceEEEEE-------CCCEEEEEe-CCCeEEEEECCCCCEEEE
Confidence 56677887777776654222 22333333 234444443 456789999988775443
No 296
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=27.28 E-value=6.7e+02 Score=27.77 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=45.9
Q ss_pred EEeeEEEcCCCe-EEEEeCCCCCCCCCCCCEEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEe
Q psy731 128 SVVKVQSDPCDR-LWALDSGVVEGKMEQPPSVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIA 206 (494)
Q Consensus 128 sV~~i~iD~~~~-LwvlD~G~~~~~~~~~Pklv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYIt 206 (494)
.|..+.... ++ |...+. + . .|..||+.+++.++++..+. ....+.+ ..+..++++.
T Consensus 60 ~V~~l~fsp-g~~L~S~s~--D--~-----~v~lWd~~~~~~~~~~~~~~--------~V~~v~~-----sp~g~~l~sg 116 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINA--K--D-----TVYVLSLYSQKVLTTVFVPG--------KITSIDT-----DASLDWMLIG 116 (902)
T ss_dssp CEEEEEEET-TTEEEEEET--T--C-----EEEEEETTTCSEEEEEECSS--------CEEEEEC-----CTTCSEEEEE
T ss_pred CEEEEEEcC-CCEEEEEEC--c--C-----eEEEEECCCCcEEEEEcCCC--------CEEEEEE-----CCCCCEEEEE
Confidence 355556555 55 443332 2 1 68899999999988876433 2223332 2356778777
Q ss_pred eCCCCeEEEEEccCCce
Q psy731 207 DSGHNHIVVYNYRTNDS 223 (494)
Q Consensus 207 Ds~~~~iIVyd~~~~~~ 223 (494)
.. .+.|.+||+.++..
T Consensus 117 s~-dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 117 LQ-NGSMIVYDIDRDQL 132 (902)
T ss_dssp ET-TSCEEEEETTTTEE
T ss_pred cC-CCcEEEEECCCCcc
Confidence 54 56799999998875
No 297
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=26.93 E-value=4.3e+02 Score=25.42 Aligned_cols=65 Identities=6% Similarity=0.052 Sum_probs=35.7
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeec--CCCCCcEEEEeeCCCCeEEEEEccCCce
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTS--ANCDNAFLYIADSGHNHIVVYNYRTNDS 223 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~--~~c~~~~vYItDs~~~~iIVyd~~~~~~ 223 (494)
.|..||+.+++......+.. ........+++...-.. .+..++....|=+..+.|.|||+.++..
T Consensus 112 ~v~lw~~~~~~~~~~~~~~~--~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 112 TVRLIITKNETIITQHVLGG--KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp CEEEEEEETTEEEEEEEECT--TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred cEEEEECCCCccceeeeecc--cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 45566777666554433322 22234455555542110 1112455666666778899999987754
No 298
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=26.64 E-value=3.4e+02 Score=24.13 Aligned_cols=95 Identities=12% Similarity=-0.039 Sum_probs=52.6
Q ss_pred CCCCeEEEEEcCCCcEEEEecCCcccCCCCcceEEcCEEeeeecceeeeeeccCCCCCceeEEEeeCCCc-ceEeeechh
Q psy731 286 SGHNHIVVYNYRTNDSHIIHHNYLHFDPLFGDFTIGGVNFQWQTGIHGMSLSPLTRDNFRVMYFHPLAST-TEFAVTTKV 364 (494)
Q Consensus 286 ~~~~gliVydl~~~~swrv~~~~~~~dP~~~~~~v~G~~f~~~~Gi~gIaLsp~~~~g~r~LYf~plss~-~ly~V~T~~ 364 (494)
..+..|.+||+++++.-+.... ....+..|+++|++ .|......+. ++|.+.+..
T Consensus 202 ~~dg~i~i~d~~~~~~~~~~~~-------------------~~~~i~~~~~~~~~-----~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 202 SNDGLIKLVDMHTGDVLRTYEG-------------------HESFVYCIKLLPNG-----DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC-------------------CSSCEEEEEECTTS-----CEEEEETTSEEEEECTTTCC
T ss_pred cCCCeEEEEECCchhhhhhhhc-------------------CCceEEEEEEecCC-----CEEEEecCCEEEEEECCCCc
Confidence 3466789999987764433211 01236778888762 3554444443 444432211
Q ss_pred hcCCCcCccccccceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCC
Q psy731 365 LQNRSLDFSRSNFDFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRG 421 (494)
Q Consensus 365 L~~~~~~~~~~~~~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~ 421 (494)
.++.+- +.......++.. .+|.+ ++--..+.|..|+.+++
T Consensus 258 -------------~~~~~~--~~~~~i~~~~~~-~~~~~-~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 258 -------------LKQVIT--LPAISIWSVDCM-SNGDI-IVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp -------------EEEEEE--CSSSCEEEEEEC-TTSCE-EEEETTSCEEEEESCGG
T ss_pred -------------eeEEEe--ccCceEEEEEEc-cCCCE-EEEeCCCcEEEEeCCCC
Confidence 111111 112235567887 67774 45566788999999873
No 299
>2r2y_A Protein ADRM1; proteasome, ubiquitin, PH-domain, 19S regulator, receptor, U proteasome-degradation pathway; 1.70A {Mus musculus} PDB: 2z59_A
Probab=26.43 E-value=89 Score=28.08 Aligned_cols=55 Identities=25% Similarity=0.546 Sum_probs=37.9
Q ss_pred eEEeeCCCCeEEEeccCCCeE-EEEeCCCCccccccceeeeeecCCeEecccceEEc-----CCceEEEEe
Q psy731 393 ASSLDEETGVIFYALLVKSGV-GCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVD-----RTGVLWVLS 457 (494)
Q Consensus 393 g~~~D~~~G~ly~~~~~~~aI-~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id-----~~g~Lwvls 457 (494)
-+.-|++.|.||+...+.+-+ .||-++. . .. +.| +-+++|++..+. .+|.+|++-
T Consensus 40 ~V~Pd~rKG~l~l~~~ed~l~hf~W~~R~--t------~~-vEd-DlIi~P~d~~F~kV~~c~tGRVyvLk 100 (153)
T 2r2y_A 40 TVTPDKRKGLVYIQQTDDSLIHFCWKDRT--S------GT-VED-DLIIFPDDCEFKRVPQCPSGRVYVLK 100 (153)
T ss_dssp EEEECCSCEEEEEEECTTSCEEEEEEETT--T------CC-EEE-EEECCTTSEEEEECTTCTTSCEEEEE
T ss_pred EEeECCCCEEEEEEECCCCcEEEEEecCC--C------CC-ccc-eEEEcCCCeEEEECCCCCCCeEEEEE
Confidence 366788999999987655544 6998765 1 12 234 567788887652 368999985
No 300
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=23.54 E-value=5.1e+02 Score=25.04 Aligned_cols=55 Identities=15% Similarity=0.274 Sum_probs=33.3
Q ss_pred EEEEEECCCCcEEEEEEcCCCccccccCCccceEEEeecCCCCCcEEEEeeCCCCeEEEEEccCCceeEE
Q psy731 157 SVQVYDLRQQMQIRFFQLKEKTDYTEESKFSNMVVDVTSANCDNAFLYIADSGHNHIVVYNYRTNDSHII 226 (494)
Q Consensus 157 klv~~dl~t~~vi~~~~lp~~~~~~~~S~l~d~vVD~~~~~c~~~~vYItDs~~~~iIVyd~~~~~~~rv 226 (494)
.|..||+.+++.++++.-.. +....+..+ +.+ .++=+..+.|.+||+.+++.-+.
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~~-------~~~-l~~~~~dg~i~vwd~~~~~~~~~ 354 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQ-------SLTSGMELK-------DNI-LVSGNADSTVKIWDIKTGQCLQT 354 (445)
T ss_dssp CEEEEETTTCCEEEEECCCC-------SCEEEEEEE-------TTE-EEEEETTSCEEEEETTTCCEEEE
T ss_pred eEEEEECCCCCEEEEEcCCc-------ccEEEEEEe-------CCE-EEEEeCCCeEEEEECCCCcEEEE
Confidence 57778888888887664322 222333332 233 33444567899999988775433
No 301
>2kr0_A Proteasomal ubiquitin receptor ADRM1; proteasome, 19S regulator, protein binding; NMR {Homo sapiens}
Probab=22.91 E-value=1e+02 Score=32.08 Aligned_cols=55 Identities=25% Similarity=0.535 Sum_probs=38.1
Q ss_pred eEEeeCCCCeEEEeccCCCeE-EEEeCCCCccccccceeeeeecCCeEecccceEEc-----CCceEEEEe
Q psy731 393 ASSLDEETGVIFYALLVKSGV-GCWNTFRGEEYNEKSMGLVAEDNATLIYPSDIRVD-----RTGVLWVLS 457 (494)
Q Consensus 393 g~~~D~~~G~ly~~~~~~~aI-~~w~~~~~~~~~~~~~~~v~~d~~~l~~pd~~~id-----~~g~Lwvls 457 (494)
-+.-|++.|.||+...+..-+ .||-++. . .. +.| +.+++|++..+. .+|.+||+-
T Consensus 41 ~V~Pd~rKG~l~l~~~ed~l~hf~W~~R~--~------~~-~Ed-dlii~P~d~~f~~V~~c~tGRVyvLk 101 (411)
T 2kr0_A 41 TVTPDKRKGLVYIQQTDDSLIHFCWKDRT--S------GN-VED-DLIIFPDDCEFKRVPQCPSGRVYVLK 101 (411)
T ss_dssp SEEECCSCEEEEEEECTTSCEEEEEEESS--S------CC-EEE-EEEECTTSEEEEECTTCSSSCEEEEE
T ss_pred EEeecCCCcEEEEEeCCCCcEEEEEecCC--C------CC-ccc-ceEEcCCceEEEECCCCCCCeEEEEE
Confidence 366788999999987554444 7998875 1 11 234 577888888763 368999984
No 302
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=22.53 E-value=1.1e+02 Score=29.95 Aligned_cols=27 Identities=11% Similarity=0.260 Sum_probs=20.9
Q ss_pred CCcEEEEeeCCCCeEEEEEccCCce-eEE
Q psy731 199 DNAFLYIADSGHNHIVVYNYRTNDS-HII 226 (494)
Q Consensus 199 ~~~~vYItDs~~~~iIVyd~~~~~~-~rv 226 (494)
.++.+|++.. .+.|..+|.++|+. |++
T Consensus 8 ~~~~v~~gs~-dg~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 8 PETLLFVSTL-DGSLHAVSKRTGSIKWTL 35 (369)
T ss_dssp CTTEEEEEET-TSEEEEEETTTCCEEEEE
T ss_pred eCCEEEEEcC-CCEEEEEECCCCCEEEEe
Confidence 4678999864 45899999988875 666
No 303
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=22.12 E-value=1.6e+02 Score=28.18 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=43.9
Q ss_pred ceEEecccCCCCCCCeEEeeCCCCeEEEeccCCCeEEEEeCCCCccccccceeeeeecCCeE---ec--ccceEEcCCce
Q psy731 378 DFKVMGSRGTGSQSGASSLDEETGVIFYALLVKSGVGCWNTFRGEEYNEKSMGLVAEDNATL---IY--PSDIRVDRTGV 452 (494)
Q Consensus 378 ~v~~~G~~G~~~qs~g~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~~~v~~d~~~l---~~--pd~~~id~~g~ 452 (494)
..+.+|+.|- .+-.-++++| +|.||-. ....++..++.++ .+..-... ..++ -| =..+.+|.+|.
T Consensus 31 ~a~~iG~~gw-~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~-----~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~ 100 (236)
T 1tl2_A 31 RATLIGKGGW-SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTH-----DNDNWMGR-AKKIGNGGWNQFQFLFFDPNGY 100 (236)
T ss_dssp HSEEEESSSC-TTCSEEEECT-TSCEEEE--ETTEEEEESCCCS-----TTCCHHHH-CEEEECSCGGGCSEEEECTTSC
T ss_pred hccccCcccc-ccceeEEECC-CccEEEE--eCCeEEEECCCCC-----Cccccccc-ccEecccccccceEEEECCCCC
Confidence 3455676552 3566899995 9999998 7777989887441 11111111 1122 11 13567899999
Q ss_pred EEEEec
Q psy731 453 LWVLSN 458 (494)
Q Consensus 453 Lwvlsn 458 (494)
||+.++
T Consensus 101 LYav~d 106 (236)
T 1tl2_A 101 LYAVSK 106 (236)
T ss_dssp EEEEET
T ss_pred EEEeCC
Confidence 999965
No 304
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=20.83 E-value=8e+02 Score=26.37 Aligned_cols=18 Identities=6% Similarity=0.207 Sum_probs=13.0
Q ss_pred CCCeEEEEEccCCce-eEE
Q psy731 209 GHNHIVVYNYRTNDS-HII 226 (494)
Q Consensus 209 ~~~~iIVyd~~~~~~-~rv 226 (494)
...+|+|+|+.+|.. |++
T Consensus 221 ~~~~Lyv~d~~tG~li~~i 239 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKL 239 (570)
T ss_dssp CCEEEEEEETTTCCEEEEE
T ss_pred CccEEEEEECCCCceEEEE
Confidence 356899999888874 444
No 305
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=20.07 E-value=4e+02 Score=26.86 Aligned_cols=74 Identities=9% Similarity=0.166 Sum_probs=47.0
Q ss_pred CCcEEEEeeCCCC--eEEEEEccCCcee-EEecCccccCCCCCccccCCccceeeeecccccccccccceee--EEeeec
Q psy731 199 DNAFLYIADSGHN--HIVVYNYRTNDSH-IIHHNYLHFDPLFGDFTIGGEYSEFFQLKEKTDYTEESKFSNM--VVDVTS 273 (494)
Q Consensus 199 ~~~~vYItDs~~~--~iIVyd~~~~~~~-rv~~~~~~~dp~~~~f~i~g~~~~~f~l~~~~~~~~~s~~~~i--~VD~~~ 273 (494)
++.|+|.-+...+ +|-+||+.+++.- |+.-.--.|+ .+..+ .+...
T Consensus 38 ~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPN----------------------------gi~~~~~~~~i~- 88 (369)
T 3s9j_A 38 GKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPN----------------------------GLPAVFGSRPSP- 88 (369)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTT----------------------------BCTTCCCEEESS-
T ss_pred CcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCC----------------------------CcccceeeEEec-
Confidence 6789999999988 9999999999965 5521111011 11111 12211
Q ss_pred CCCCCcEEEEecCCCCeEEEEEcCCCcEEEE
Q psy731 274 ANCDDAFLYIADSGHNHIVVYNYRTNDSHII 304 (494)
Q Consensus 274 ~~c~~~~~YI~D~~~~gliVydl~~~~swrv 304 (494)
+..-+||++...++|..+|.+.....++
T Consensus 89 ---~~DsI~i~~~~~~~i~l~n~~G~~~~k~ 116 (369)
T 3s9j_A 89 ---DSQYILVAQNNISRLSSINSQGEIIRNY 116 (369)
T ss_dssp ---STTSEEEEEGGGTEEEEECTTCCEEEEE
T ss_pred ---CCCEEEEEeCCcceEEEECCCceEEEEE
Confidence 2344677776677788888887777776
Done!