Query psy7317
Match_columns 919
No_of_seqs 187 out of 724
Neff 2.7
Searched_HMMs 13730
Date Fri Aug 16 23:42:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7317.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7317hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fu3a_ g.3.6.1 (A:) Conotoxin 12.4 36 0.0026 23.3 1.2 12 110-130 13-24 (27)
2 d1vsra_ c.52.1.15 (A:) Very sh 5.9 70 0.0051 28.5 0.6 25 87-122 34-59 (134)
3 d1ea0a1 b.80.4.1 (A:1203-1472) 5.0 2.2E+02 0.016 27.5 3.7 40 724-765 79-118 (270)
4 d1pe4a_ g.3.7.1 (A:) Scorpion 3.6 87 0.0063 25.3 -0.6 39 71-131 4-44 (67)
5 d1ccda_ a.101.1.1 (A:) Clara c 2.9 1.9E+02 0.014 23.7 0.9 56 14-69 3-73 (77)
6 d2sn3a_ g.3.7.1 (A:) Scorpion 2.9 1.2E+02 0.0084 24.4 -0.5 42 95-144 15-61 (65)
7 d1tkea2 d.67.1.1 (A:63-224) Th 2.7 2.9E+02 0.021 23.4 2.0 34 70-103 115-149 (162)
8 d1ju8a_ g.3.6.4 (A:) Leginsuli 2.7 2.4E+02 0.017 20.5 1.1 18 786-803 6-23 (37)
9 d1dqta_ b.1.1.1 (A:) Immunorec 2.7 1.8E+02 0.013 23.1 0.6 31 63-93 17-50 (117)
10 d1utga_ a.101.1.1 (A:) Uterogl 2.6 2.6E+02 0.019 22.5 1.5 25 42-66 42-66 (70)
No 1
>d1fu3a_ g.3.6.1 (A:) Conotoxin {Conus textile, Tx VIa [TaxId: 6494]}
Probab=12.41 E-value=36 Score=23.30 Aligned_cols=12 Identities=42% Similarity=1.567 Sum_probs=8.9
Q ss_pred ccCcccceeeccceeeeEEEe
Q psy7317 110 ERGCCEIFSLQKTEEGYCYSF 130 (919)
Q Consensus 110 ~~nCCeiF~lqkTe~G~CyvF 130 (919)
..|||+ |||.||
T Consensus 13 dqnccd---------gyciv~ 24 (27)
T d1fu3a_ 13 DQNCCD---------GYCIVL 24 (27)
T ss_dssp SCCBSS---------SCEETT
T ss_pred hcccCC---------ceEEEE
Confidence 358887 788776
No 2
>d1vsra_ c.52.1.15 (A:) Very short patch repair (VSR) endonuclease {Escherichia coli [TaxId: 562]}
Probab=5.91 E-value=70 Score=28.50 Aligned_cols=25 Identities=16% Similarity=0.412 Sum_probs=16.9
Q ss_pred ccceeEEe-eeEeeccccccCCCCccCcccceeeccc
Q psy7317 87 KLSIAVFS-SITMTSDSVKRLGPRERGCCEIFSLQKT 122 (919)
Q Consensus 87 ~~~i~~F~-~C~WR~~~v~~~~~~~~nCCeiF~lqkT 122 (919)
+.-++||+ .|.|-+. +|| +|.+-+|
T Consensus 34 ~~k~aIfvdGcFWH~h----------~c~-~~~~Pkt 59 (134)
T d1vsra_ 34 EYRCVIFTHGCFWHHH----------HCY-LFKVPAT 59 (134)
T ss_dssp GGTEEEEEECTTTTTC----------SST-TCCCCSS
T ss_pred CccEEEEEcCccccCC----------Ccc-ccCCCCc
Confidence 34567776 9999855 554 6776666
No 3
>d1ea0a1 b.80.4.1 (A:1203-1472) Alpha subunit of glutamate synthase, C-terminal domain {Azospirillum brasilense [TaxId: 192]}
Probab=4.98 E-value=2.2e+02 Score=27.49 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=32.4
Q ss_pred ccceEEEEeCCCcccCCCCCCCCceEEEeeCCCCCCCCCCCc
Q psy7317 724 LNGAKVSEYNSRETEGIEQRDLNGAKIMVHTSYEYPDAGDGV 765 (919)
Q Consensus 724 lNGLSLILNIEQEEY~~sSsssAGFKVLIHdP~EfPdmsd~g 765 (919)
..|++|.|.-+.+||... .-.|-+|.||.|.+.|......
T Consensus 79 ~~g~~l~l~G~anDyvGk--g~~gg~i~v~~~~~~~~~~~~~ 118 (270)
T d1ea0a1 79 VQGIKLEVMGDANDYVGK--GLSGGTIVVRPTTSSPLETNKN 118 (270)
T ss_dssp BTTEEEEEEEEECSCTTT--TCEEEEEEEECCTTCCCCGGGS
T ss_pred cCccEEEEEecCcchhcc--ccccceEEEECCcccCcccccc
Confidence 369999999999999743 3579999999999988765433
No 4
>d1pe4a_ g.3.7.1 (A:) Scorpion toxin {Mexican scorpion (Centruroides noxius) [TaxId: 6878]}
Probab=3.55 E-value=87 Score=25.32 Aligned_cols=39 Identities=23% Similarity=0.591 Sum_probs=24.8
Q ss_pred CCCCCCCccccCCCCCccceeEEeeeEeeccccccCCCCccCccc-ceee-ccceeeeEEEee
Q psy7317 71 YPDAGDGVWLPSTHGKKLSIAVFSSITMTSDSVKRLGPRERGCCE-IFSL-QKTEEGYCYSFN 131 (919)
Q Consensus 71 ~~~~~~g~w~~~~~~~~~~i~~F~~C~WR~~~v~~~~~~~~nCCe-iF~l-qkTe~G~CyvFN 131 (919)
||-..+||+. +|.|.+... .+|. +=.. +.-.+||||.|-
T Consensus 4 Y~v~~~GCky--------------~C~~lgen~--------~~C~~eCk~~~Gg~YGYC~~~~ 44 (67)
T d1pe4a_ 4 YPLASNGCKF--------------GCSGLGENN--------PTCNHVCEKKAGSDYGYCYAWT 44 (67)
T ss_dssp CCCCSSSCSS--------------SCCTTSSCC--------TTHHHHHHHTSCSCCEECSSSS
T ss_pred ccCCCCCCEE--------------EeeeccCCc--------chhHhHhhhhcCCCceEecccc
Confidence 5656677776 688775421 2443 4433 567889999985
No 5
>d1ccda_ a.101.1.1 (A:) Clara cell 17kDa protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=2.90 E-value=1.9e+02 Score=23.74 Aligned_cols=56 Identities=20% Similarity=0.371 Sum_probs=33.8
Q ss_pred CchHHHHHHHHHHhhccccchhcchH-------------HHhhhccccCccccccHHHHHHHHhcc--ccc
Q psy7317 14 AIQPALVHIMSALSLMQKPSYHRMAP-------------HINASMQVLPLLSQVNISDFMLHIMVH--TSY 69 (919)
Q Consensus 14 ~~~~a~~~~~~~ls~l~~~~y~~~~~-------------~~~~~~~~l~~l~~vNitd~~l~~m~~--c~~ 69 (919)
+|=|||...+..|=+=..-.|...+. .|+.-++-|+.-...||+.||.+|.-. |+.
T Consensus 3 ~iCPa~~~~V~~fl~GT~eeY~~~vk~y~~d~~~lea~~~LK~cVDtLteedK~~i~~liekI~~SplC~~ 73 (77)
T d1ccda_ 3 DICPGFLQVLEALLLGSESNYEAALKPFNPASDLQNAGTQLKRLVDTLPQETRINIVKLTEKILTSPLCEQ 73 (77)
T ss_dssp TSCHHHHHHHHHHTTSCHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSTTTSC
T ss_pred cccHHHHHHHHHHHcCCHHHHHHHHHccCCCHHHHHHHHHHHHHHhcCCHhhHHHHHHHHHHHHcCccccc
Confidence 35567766666553222222332222 233335668888889999999999865 763
No 6
>d2sn3a_ g.3.7.1 (A:) Scorpion toxin {Centruroides sculpturatus, variant 3 [TaxId: 218467]}
Probab=2.89 E-value=1.2e+02 Score=24.42 Aligned_cols=42 Identities=21% Similarity=0.355 Sum_probs=23.4
Q ss_pred eeEeeccccccCCCCccCcccceee--ccceeeeEEEeec---cccCcCCcCccc
Q psy7317 95 SITMTSDSVKRLGPRERGCCEIFSL--QKTEEGYCYSFNS---LTSEEGKHWRES 144 (919)
Q Consensus 95 ~C~WR~~~v~~~~~~~~nCCeiF~l--qkTe~G~CyvFNS---~~S~~~~~w~~s 144 (919)
+|.+.+... .|=.+=.+ +.-.+|+||.|-= -+.+.-++||.-
T Consensus 15 ~C~~lg~n~--------~C~~eCk~k~~gg~yGYCy~~aCwCegLpd~~~~W~~~ 61 (65)
T d2sn3a_ 15 GCLKLGENE--------GCDTECKAKNQGGSYGYCYAFACWCEGLPESTPTYPLP 61 (65)
T ss_dssp BCSSCBSCH--------HHHHHHHSTTTCCSEEEEETTEEEEESCCTTSCCSSCT
T ss_pred EeEecCCcc--------hhHHHhhhccCCcCceEecceEEeEecCcCcccccCCC
Confidence 577764322 34335554 5688999999931 122222566643
No 7
>d1tkea2 d.67.1.1 (A:63-224) Threonyl-tRNA synthetase (ThrRS), second 'additional' domain {Escherichia coli [TaxId: 562]}
Probab=2.74 E-value=2.9e+02 Score=23.45 Aligned_cols=34 Identities=21% Similarity=0.243 Sum_probs=24.5
Q ss_pred cCCCCCCCccccCCCC-CccceeEEeeeEeecccc
Q psy7317 70 EYPDAGDGVWLPSTHG-KKLSIAVFSSITMTSDSV 103 (919)
Q Consensus 70 ~~~~~~~g~w~~~~~~-~~~~i~~F~~C~WR~~~v 103 (919)
.|-|-|.|.-.|+|-- |.++|.=-+++.||+++-
T Consensus 115 ~~~dlc~Gphv~sTg~ik~FkL~~vsgaYw~gd~~ 149 (162)
T d1tkea2 115 EYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSN 149 (162)
T ss_dssp TEEEEESCCCCSBGGGCCCEEEEEEEEEEGGGCTT
T ss_pred ceEeecCCCccccCcccceEEEEEechhhcCCCCC
Confidence 4567788888888753 455555566999998865
No 8
>d1ju8a_ g.3.6.4 (A:) Leginsulin {Soybean (Glycine max) [TaxId: 3847]}
Probab=2.72 E-value=2.4e+02 Score=20.46 Aligned_cols=18 Identities=11% Similarity=0.091 Sum_probs=11.1
Q ss_pred CcccccCCCCCCCCcccc
Q psy7317 786 RHLRLLRPPDGTPGFDSL 803 (919)
Q Consensus 786 GCLPFFyPp~nvPvCdCL 803 (919)
-|-||-||+-+...|.|.
T Consensus 6 ~CspFemPpc~s~dCRCi 23 (37)
T d1ju8a_ 6 ACSPFEVPPCRSRDCRCV 23 (37)
T ss_dssp EECSSSSSSSSCTTSEEE
T ss_pred cccccccCCCCCCCceEE
Confidence 367788876655555443
No 9
>d1dqta_ b.1.1.1 (A:) Immunoreceptor CTLA-4 (CD152), N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=2.69 E-value=1.8e+02 Score=23.12 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=19.2
Q ss_pred HhccccccCCCCCCCc---cccCCCCCccceeEE
Q psy7317 63 IMVHTSYEYPDAGDGV---WLPSTHGKKLSIAVF 93 (919)
Q Consensus 63 ~m~~c~~~~~~~~~g~---w~~~~~~~~~~i~~F 93 (919)
+.++|.+..+...... |+.-++|+.+.+.+.
T Consensus 17 v~L~C~~~~~~~~~~~~v~WyrQ~~g~~~~~~~~ 50 (117)
T d1dqta_ 17 ASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCAT 50 (117)
T ss_dssp EEEEEEEESCCTTCEEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEECccCCcccceeEEEEEeCCCCCcEEEEE
Confidence 4678886544333322 888788887775544
No 10
>d1utga_ a.101.1.1 (A:) Uteroglobin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=2.65 E-value=2.6e+02 Score=22.46 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=19.0
Q ss_pred hhhccccCccccccHHHHHHHHhcc
Q psy7317 42 NASMQVLPLLSQVNISDFMLHIMVH 66 (919)
Q Consensus 42 ~~~~~~l~~l~~vNitd~~l~~m~~ 66 (919)
+.-++-|+.=...||+.|+.+|.-+
T Consensus 42 K~cvDtLt~edK~~i~~liekI~~S 66 (70)
T d1utga_ 42 KKVLDSLPQTTRENIMKLTEKIVKS 66 (70)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHTS
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhcC
Confidence 3445668888888999999998643
Done!