Your job contains 1 sequence.
>psy7321
MDISTLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVS
LVISRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREE
NWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAET
KDETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASA
GQQRSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSS
ILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSI
VHFETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKMADYLVN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7321
(408 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1349414 - symbol:Cops4 "COP9 (constitutive photom... 1493 4.5e-153 1
UNIPROTKB|Q5ZJV0 - symbol:COPS4 "Uncharacterized protein"... 1492 5.8e-153 1
UNIPROTKB|E2RT55 - symbol:COPS4 "Uncharacterized protein"... 1487 2.0e-152 1
UNIPROTKB|Q9BT78 - symbol:COPS4 "COP9 signalosome complex... 1487 2.0e-152 1
UNIPROTKB|A7Y521 - symbol:COPS4 "COP9 signalosome complex... 1487 2.0e-152 1
RGD|1302952 - symbol:Cops4 "COP9 signalosome subunit 4" s... 1486 2.5e-152 1
UNIPROTKB|Q3SZA0 - symbol:COPS4 "COP9 signalosome complex... 1484 4.1e-152 1
ZFIN|ZDB-GENE-030131-4317 - symbol:cops4 "COP9 constituti... 1483 5.2e-152 1
FB|FBgn0027054 - symbol:CSN4 "COP9 complex homolog subuni... 1457 3.0e-149 1
UNIPROTKB|D6RAX7 - symbol:COPS4 "COP9 signalosome complex... 1367 1.0e-139 1
UNIPROTKB|D6RD63 - symbol:COPS4 "COP9 signalosome complex... 1035 1.6e-104 1
DICTYBASE|DDB_G0293844 - symbol:csn4 "proteasome componen... 939 2.3e-94 1
TAIR|locus:2159961 - symbol:COP8 "AT5G42970" species:3702... 879 5.3e-88 1
ASPGD|ASPL0000047008 - symbol:csnD species:162425 "Emeric... 668 1.2e-65 1
UNIPROTKB|G4NCX3 - symbol:MGG_00336 "COP9 signalosome com... 613 8.1e-60 1
WB|WBGene00000816 - symbol:csn-4 species:6239 "Caenorhabd... 607 3.5e-59 1
UNIPROTKB|Q9N359 - symbol:csn-4 "COP9 signalosome complex... 607 3.5e-59 1
DICTYBASE|DDB_G0281051 - symbol:psmD12 "26S proteasome no... 195 1.2e-12 1
UNIPROTKB|O00232 - symbol:PSMD12 "26S proteasome non-ATPa... 191 3.7e-12 1
UNIPROTKB|Q5RBI3 - symbol:PSMD12 "26S proteasome non-ATPa... 191 3.7e-12 1
UNIPROTKB|Q2KJ25 - symbol:PSMD12 "26S proteasome non-ATPa... 186 1.4e-11 1
UNIPROTKB|F1RSM2 - symbol:PSMD12 "Uncharacterized protein... 186 1.4e-11 1
ZFIN|ZDB-GENE-030131-617 - symbol:psmd12 "proteasome (pro... 186 1.4e-11 1
MGI|MGI:1914247 - symbol:Psmd12 "proteasome (prosome, mac... 185 1.8e-11 1
RGD|1359305 - symbol:Psmd12 "proteasome (prosome, macropa... 185 1.8e-11 1
SGD|S000002306 - symbol:RPN5 "Subunit of the CSN and 26S ... 183 2.8e-11 1
POMBASE|SPAC22A12.03c - symbol:csn4 "COP9/signalosome com... 178 6.8e-11 1
UNIPROTKB|F1NPQ0 - symbol:LOC100859465 "Uncharacterized p... 179 8.4e-11 1
GENEDB_PFALCIPARUM|PF10_0174 - symbol:PF10_0174 "26s prot... 175 2.5e-10 1
UNIPROTKB|Q8IJM0 - symbol:PF10_0174 "26s proteasome subun... 175 2.5e-10 1
TAIR|locus:2176100 - symbol:RPN5B "AT5G64760" species:370... 157 2.6e-10 2
POMBASE|SPAC1420.03 - symbol:rpn501 "19S proteasome regul... 168 1.3e-09 1
POMBASE|SPAPB8E5.02c - symbol:rpn502 "19S proteasome regu... 168 1.3e-09 1
FB|FBgn0028690 - symbol:Rpn5 "Regulatory particle non-ATP... 123 9.6e-08 2
ASPGD|ASPL0000076235 - symbol:AN4775 species:162425 "Emer... 133 1.2e-05 1
UNIPROTKB|G5EHP6 - symbol:MGCH7_ch7g327 "26S proteasome r... 104 0.00033 2
ASPGD|ASPL0000014128 - symbol:AN10519 species:162425 "Eme... 118 0.00045 1
>MGI|MGI:1349414 [details] [associations]
symbol:Cops4 "COP9 (constitutive photomorphogenic) homolog,
subunit 4 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1349414 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 eggNOG:NOG298640 HOGENOM:HOG000158382
KO:K12178 OMA:YNELSYR CTD:51138 HOVERGEN:HBG051136
OrthoDB:EOG4MGS7F EMBL:AF071314 EMBL:AK009955 IPI:IPI00131871
RefSeq:NP_036131.1 UniGene:Mm.957 PDB:1UFM PDBsum:1UFM
ProteinModelPortal:O88544 SMR:O88544 IntAct:O88544 STRING:O88544
PhosphoSite:O88544 REPRODUCTION-2DPAGE:O88544 PaxDb:O88544
PRIDE:O88544 Ensembl:ENSMUST00000045993 GeneID:26891 KEGG:mmu:26891
InParanoid:O88544 EvolutionaryTrace:O88544 NextBio:304719
Bgee:O88544 Genevestigator:O88544 GermOnline:ENSMUSG00000035297
Uniprot:O88544
Length = 406
Score = 1493 (530.6 bits), Expect = 4.5e-153, P = 4.5e-153
Identities = 292/399 (73%), Positives = 340/399 (85%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
+ ++ LA L + +GSHKD A KYR ILE ++ T E L FVEA+VNENVSLVI
Sbjct: 3 AAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGTEQL-EALKAFVEAMVNENVSLVI 61
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD THL + PD AK V HFTL+K+QPRVISFEEQVASIRQHLA IYE+EE+WR
Sbjct: 62 SRQLLTDFCTHLPNLPDSTAKEVYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWR 121
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL+TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 122 NAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 181
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+ ALK AL CTILASAGQQ
Sbjct: 182 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQ 241
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 242 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 301
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 302 RAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHF 361
Query: 364 ETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKM 402
ETRE LP+WDKQI+SLC+++++++E+I PEW ++ M
Sbjct: 362 ETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAM 400
>UNIPROTKB|Q5ZJV0 [details] [associations]
symbol:COPS4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180
GO:GO:0010388 eggNOG:NOG298640 HOGENOM:HOG000158382 KO:K12178
OMA:YNELSYR CTD:51138 GeneTree:ENSGT00530000063471
HOVERGEN:HBG051136 OrthoDB:EOG4MGS7F EMBL:AADN02009032
EMBL:AJ720334 IPI:IPI00578250 RefSeq:NP_001006447.1
UniGene:Gga.6980 SMR:Q5ZJV0 IntAct:Q5ZJV0 STRING:Q5ZJV0
Ensembl:ENSGALT00000018144 GeneID:422594 KEGG:gga:422594
InParanoid:Q5ZJV0 NextBio:20825204 Uniprot:Q5ZJV0
Length = 411
Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
Identities = 291/399 (72%), Positives = 340/399 (85%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
+ ++ +LA L + +GSHKD A KYR ILE ++ E L FVEA+VNENVSLVI
Sbjct: 8 AAVRQELAQLMNSSGSHKDLAGKYRQILEKAIQLSGAQQL-EALKAFVEAMVNENVSLVI 66
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD THL S PD AK + HFTL+K+QPRVISFEEQVASIRQHLA IYE+EE+WR
Sbjct: 67 SRQLLTDFCTHLPSLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWR 126
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL+TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 127 NAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 186
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+ ALK AL CTILASAGQQ
Sbjct: 187 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKSIVHESERLEALKHALHCTILASAGQQ 246
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 247 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 306
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 307 RAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHF 366
Query: 364 ETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKM 402
ETRE LP+WDKQI+SLC+++++++E+I PEW ++ M
Sbjct: 367 ETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAM 405
>UNIPROTKB|E2RT55 [details] [associations]
symbol:COPS4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008180 "signalosome" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12178 OMA:YNELSYR
GeneTree:ENSGT00530000063471 EMBL:AAEX03016729
RefSeq:XP_003640149.1 ProteinModelPortal:E2RT55 SMR:E2RT55
PRIDE:E2RT55 Ensembl:ENSCAFT00000014418 GeneID:100856586
KEGG:cfa:100856586 NextBio:20853792 Uniprot:E2RT55
Length = 406
Score = 1487 (528.5 bits), Expect = 2.0e-152, P = 2.0e-152
Identities = 290/399 (72%), Positives = 339/399 (84%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
+ ++ LA L + +GSHKD A KYR ILE ++ E L FVEA+VNENVSLVI
Sbjct: 3 AAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQL-EALKAFVEAMVNENVSLVI 61
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD THL + PD AK + HFTL+K+QPRVISFEEQVASIRQHLA IYE+EE+WR
Sbjct: 62 SRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWR 121
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL+TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 122 NAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 181
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+ ALK AL CTILASAGQQ
Sbjct: 182 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQ 241
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 242 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 301
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 302 RAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHF 361
Query: 364 ETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKM 402
ETRE LP+WDKQI+SLC+++++++E+I PEW ++ M
Sbjct: 362 ETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAM 400
>UNIPROTKB|Q9BT78 [details] [associations]
symbol:COPS4 "COP9 signalosome complex subunit 4"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IDA] [GO:0010388 "cullin
deneddylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:CH471057 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG298640
HOGENOM:HOG000158382 KO:K12178 CTD:51138 HOVERGEN:HBG051136
OrthoDB:EOG4MGS7F EMBL:AF100757 EMBL:AK001210 EMBL:AK024005
EMBL:BC004302 EMBL:BC009292 EMBL:BC093007 IPI:IPI00171844
RefSeq:NP_001244935.1 RefSeq:NP_057213.2 UniGene:Hs.190384
ProteinModelPortal:Q9BT78 SMR:Q9BT78 DIP:DIP-34516N IntAct:Q9BT78
MINT:MINT-1464138 STRING:Q9BT78 PhosphoSite:Q9BT78 DMDM:55976582
OGP:Q9BT78 REPRODUCTION-2DPAGE:IPI00171844 PaxDb:Q9BT78
PeptideAtlas:Q9BT78 PRIDE:Q9BT78 Ensembl:ENST00000264389
GeneID:51138 KEGG:hsa:51138 UCSC:uc003hoa.3 GeneCards:GC04P083955
HGNC:HGNC:16702 HPA:HPA036894 neXtProt:NX_Q9BT78 PharmGKB:PA26756
InParanoid:Q9BT78 PhylomeDB:Q9BT78 ChiTaRS:COPS4 GenomeRNAi:51138
NextBio:53990 ArrayExpress:Q9BT78 Bgee:Q9BT78 CleanEx:HS_COPS4
Genevestigator:Q9BT78 GermOnline:ENSG00000138663 Uniprot:Q9BT78
Length = 406
Score = 1487 (528.5 bits), Expect = 2.0e-152, P = 2.0e-152
Identities = 290/399 (72%), Positives = 339/399 (84%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
+ ++ LA L + +GSHKD A KYR ILE ++ E L FVEA+VNENVSLVI
Sbjct: 3 AAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQL-EALKAFVEAMVNENVSLVI 61
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD THL + PD AK + HFTL+K+QPRVISFEEQVASIRQHLA IYE+EE+WR
Sbjct: 62 SRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWR 121
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL+TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 122 NAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 181
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+ ALK AL CTILASAGQQ
Sbjct: 182 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQ 241
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 242 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 301
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 302 RAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHF 361
Query: 364 ETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKM 402
ETRE LP+WDKQI+SLC+++++++E+I PEW ++ M
Sbjct: 362 ETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAM 400
>UNIPROTKB|A7Y521 [details] [associations]
symbol:COPS4 "COP9 signalosome complex subunit 4"
species:9823 "Sus scrofa" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 eggNOG:NOG298640 HOGENOM:HOG000158382 KO:K12178
OMA:YNELSYR CTD:51138 GeneTree:ENSGT00530000063471
HOVERGEN:HBG051136 OrthoDB:EOG4MGS7F EMBL:EF635914
RefSeq:NP_001098774.1 UniGene:Ssc.5658 ProteinModelPortal:A7Y521
SMR:A7Y521 STRING:A7Y521 PRIDE:A7Y521 Ensembl:ENSSSCT00000010121
GeneID:100125960 KEGG:ssc:100125960 Uniprot:A7Y521
Length = 406
Score = 1487 (528.5 bits), Expect = 2.0e-152, P = 2.0e-152
Identities = 290/399 (72%), Positives = 339/399 (84%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
+ ++ LA L + +GSHKD A KYR ILE ++ E L FVEA+VNENVSLVI
Sbjct: 3 AAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQL-EALKAFVEAMVNENVSLVI 61
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD THL + PD AK + HFTL+K+QPRVISFEEQVASIRQHLA IYE+EE+WR
Sbjct: 62 SRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWR 121
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL+TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 122 NAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 181
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+ ALK AL CTILASAGQQ
Sbjct: 182 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQ 241
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 242 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 301
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 302 RAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHF 361
Query: 364 ETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKM 402
ETRE LP+WDKQI+SLC+++++++E+I PEW ++ M
Sbjct: 362 ETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAM 400
>RGD|1302952 [details] [associations]
symbol:Cops4 "COP9 signalosome subunit 4" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 RGD:1302952
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180
GO:GO:0010388 eggNOG:NOG298640 HOGENOM:HOG000158382 KO:K12178
OMA:YNELSYR CTD:51138 GeneTree:ENSGT00530000063471
HOVERGEN:HBG051136 OrthoDB:EOG4MGS7F EMBL:BC079384 IPI:IPI00193349
RefSeq:NP_001004275.1 UniGene:Rn.7506 ProteinModelPortal:Q68FS2
SMR:Q68FS2 STRING:Q68FS2 PhosphoSite:Q68FS2 PRIDE:Q68FS2
Ensembl:ENSRNOT00000003046 GeneID:360915 KEGG:rno:360915
InParanoid:Q68FS2 NextBio:674575 Genevestigator:Q68FS2
GermOnline:ENSRNOG00000023650 Uniprot:Q68FS2
Length = 406
Score = 1486 (528.2 bits), Expect = 2.5e-152, P = 2.5e-152
Identities = 292/399 (73%), Positives = 339/399 (84%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
+ ++ LA L + +GSHKD A KYR ILE ++ T E L FVEA+VNENVSLVI
Sbjct: 3 AAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGTEQL-EALKAFVEAMVNENVSLVI 61
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD THL + PD AK V HFTL+KVQPRVISFEEQVASIRQ LA IYE+EE+WR
Sbjct: 62 SRQLLTDFCTHLPNLPDSTAKEVYHFTLEKVQPRVISFEEQVASIRQRLASIYEKEEDWR 121
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL+TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 122 NAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 181
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+ ALK AL CTILASAGQQ
Sbjct: 182 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQ 241
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 242 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 301
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 302 RAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHF 361
Query: 364 ETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKM 402
ETRE LP+WDKQI+SLC+++++++E+I PEW ++ M
Sbjct: 362 ETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAM 400
>UNIPROTKB|Q3SZA0 [details] [associations]
symbol:COPS4 "COP9 signalosome complex subunit 4"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 eggNOG:NOG298640 HOGENOM:HOG000158382
KO:K12178 OMA:YNELSYR EMBL:BC103017 IPI:IPI00700909
RefSeq:NP_001029866.1 UniGene:Bt.48928 ProteinModelPortal:Q3SZA0
SMR:Q3SZA0 STRING:Q3SZA0 PRIDE:Q3SZA0 Ensembl:ENSBTAT00000009128
GeneID:540223 KEGG:bta:540223 CTD:51138
GeneTree:ENSGT00530000063471 HOVERGEN:HBG051136 InParanoid:Q3SZA0
OrthoDB:EOG4MGS7F NextBio:20878499 Uniprot:Q3SZA0
Length = 406
Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
Identities = 289/399 (72%), Positives = 339/399 (84%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
+ ++ LA L + +GSHKD A KYR ILE ++ E L FVE++VNENVSLVI
Sbjct: 3 AAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQL-EALKAFVESMVNENVSLVI 61
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD THL + PD AK + HFTL+K+QPRVISFEEQVASIRQHLA IYE+EE+WR
Sbjct: 62 SRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWR 121
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL+TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 122 NAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 181
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+ ALK AL CTILASAGQQ
Sbjct: 182 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQ 241
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 242 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 301
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 302 RAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHF 361
Query: 364 ETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKM 402
ETRE LP+WDKQI+SLC+++++++E+I PEW ++ M
Sbjct: 362 ETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAM 400
>ZFIN|ZDB-GENE-030131-4317 [details] [associations]
symbol:cops4 "COP9 constitutive photomorphogenic
homolog subunit 4 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-030131-4317 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180
HOGENOM:HOG000158382 KO:K12178 OMA:YNELSYR CTD:51138
GeneTree:ENSGT00530000063471 HOVERGEN:HBG051136 OrthoDB:EOG4MGS7F
EMBL:BC056527 EMBL:BC065617 IPI:IPI00488179 RefSeq:NP_991119.1
UniGene:Dr.77245 ProteinModelPortal:Q6P0H6 SMR:Q6P0H6 STRING:Q6P0H6
PRIDE:Q6P0H6 Ensembl:ENSDART00000064215 GeneID:325592
KEGG:dre:325592 eggNOG:COG5071 InParanoid:Q6P0H6 NextBio:20809371
Bgee:Q6P0H6 Uniprot:Q6P0H6
Length = 406
Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
Identities = 290/397 (73%), Positives = 338/397 (85%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
S ++ +LA L + +GSHKD A KYR ILE L+ D E L FVEA+VNENVSLVI
Sbjct: 3 SGVRQELAQLMNSSGSHKDLAGKYRQILEKALQFTDAEQL-EALKAFVEAMVNENVSLVI 61
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD HL + PD++AK V HFTL+K+QPRVISFEEQVASIRQHLA IYE++E+WR
Sbjct: 62 SRQLLTDFCAHLPNLPDDIAKVVCHFTLEKIQPRVISFEEQVASIRQHLATIYEKQEDWR 121
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 122 NAAQVLVGIPLETGQKQYNVDYKLDTYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 181
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E ER+ ALK AL CTILASAGQQ
Sbjct: 182 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKSIVHETERLEALKHALHCTILASAGQQ 241
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 242 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 301
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 302 RAVIEHNLLSASKLYNNITFEELGALLEIPPAKAEKIASQMITEGRMNGFIDQIDGIVHF 361
Query: 364 ETREILPSWDKQIESLCYRIDHIMEQIETVQPEWLSK 400
ETRE LP+WDKQI+SLC+++++++E+I PEW ++
Sbjct: 362 ETREPLPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQ 398
>FB|FBgn0027054 [details] [associations]
symbol:CSN4 "COP9 complex homolog subunit 4" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome"
evidence=ISS;NAS;IMP;TAS;IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0001751 "compound eye photoreceptor cell
differentiation" evidence=IMP] [GO:0000338 "protein deneddylation"
evidence=IMP] [GO:0019781 "NEDD8 activating enzyme activity"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0032435 "negative regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0007095 "mitotic
G2 DNA damage checkpoint" evidence=IGI] [GO:0046331 "lateral
inhibition" evidence=IMP] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:AE013599 GO:GO:0005737 GO:GO:0007095
GO:GO:0050821 GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0044212 GO:GO:0046331 GO:GO:0008180 GO:GO:0001751
GO:GO:0032435 GO:GO:0000338 GO:GO:0019781 eggNOG:NOG298640
KO:K12178 OMA:YNELSYR GeneTree:ENSGT00530000063471 EMBL:AF129082
EMBL:BT004883 RefSeq:NP_001163080.1 RefSeq:NP_477444.1
UniGene:Dm.3377 ProteinModelPortal:Q9V345 SMR:Q9V345 IntAct:Q9V345
MINT:MINT-279079 STRING:Q9V345 PaxDb:Q9V345 PRIDE:Q9V345
EnsemblMetazoa:FBtr0088859 EnsemblMetazoa:FBtr0301230 GeneID:35759
KEGG:dme:Dmel_CG8725 CTD:35759 FlyBase:FBgn0027054
InParanoid:Q9V345 OrthoDB:EOG441NSS PhylomeDB:Q9V345
GenomeRNAi:35759 NextBio:795082 Bgee:Q9V345 GermOnline:CG8725
Uniprot:Q9V345
Length = 407
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 290/398 (72%), Positives = 334/398 (83%)
Query: 3 IST--LKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVS 60
IST L++QL L + G+HKDQADKYR +L+ +L N + L LFVEAIVNE+VS
Sbjct: 7 ISTAALRSQLMGLINFTGTHKDQADKYRQLLKTVLTNTGQELI-DGLRLFVEAIVNEHVS 65
Query: 61 LVISRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREE 120
LVISRQIL DV + L PD+++K +SHFTL+KV PRVISFEEQVA IR HLA IYER +
Sbjct: 66 LVISRQILNDVGSELSKLPDDLSKMLSHFTLEKVNPRVISFEEQVAGIRFHLANIYERNQ 125
Query: 121 NWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAET 180
WRDAA VLVGIPLETGQKQYSV+ KL TY+KIARLYLED D VQAE FINRASLLQAET
Sbjct: 126 QWRDAATVLVGIPLETGQKQYSVECKLGTYLKIARLYLEDNDSVQAELFINRASLLQAET 185
Query: 181 KDETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASA 240
E LQV YKVCYARVLDYRRKFIEAAQRY+ELSY+ I+D+ ER+TALK ALICT+LASA
Sbjct: 186 NSEELQVLYKVCYARVLDYRRKFIEAAQRYNELSYRKIVDQGERMTALKKALICTVLASA 245
Query: 241 GQQRSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSS 300
GQQRSRMLATLFKDERCQHLPAY ILEKMYL+RIIR+SELQ+F ALL+ HQKA T DGSS
Sbjct: 246 GQQRSRMLATLFKDERCQHLPAYGILEKMYLERIIRRSELQEFEALLQDHQKAATSDGSS 305
Query: 301 ILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSI 360
IL+RAV EHNLLSASKLYNNI+F ELGALL I A KAEKIAS MI EGRMNG++DQI +I
Sbjct: 306 ILDRAVFEHNLLSASKLYNNITFEELGALLDIPAVKAEKIASQMITEGRMNGHIDQISAI 365
Query: 361 VHFETREILPSWDKQIESLCYRIDHIMEQIETVQPEWL 398
VHFE RE+LP WD+QI+SLCY+++ I+E+I +P+W+
Sbjct: 366 VHFENRELLPQWDRQIQSLCYQVNSIIEKISVAEPDWM 403
>UNIPROTKB|D6RAX7 [details] [associations]
symbol:COPS4 "COP9 signalosome complex subunit 4"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005634 Gene3D:1.10.10.10
InterPro:IPR011991 HOGENOM:HOG000158382 OMA:YNELSYR HGNC:HGNC:16702
ChiTaRS:COPS4 EMBL:AC021105 EMBL:AC073840 EMBL:AC108473
IPI:IPI00966770 ProteinModelPortal:D6RAX7 SMR:D6RAX7
Ensembl:ENST00000511653 ArrayExpress:D6RAX7 Bgee:D6RAX7
Uniprot:D6RAX7
Length = 420
Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
Identities = 272/362 (75%), Positives = 309/362 (85%)
Query: 4 STLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVI 63
+ ++ LA L + +GSHKD A KYR ILE ++ E L FVEA+VNENVSLVI
Sbjct: 3 AAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQL-EALKAFVEAMVNENVSLVI 61
Query: 64 SRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWR 123
SRQ+LTD THL + PD AK + HFTL+K+QPRVISFEEQVASIRQHLA IYE+EE+WR
Sbjct: 62 SRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWR 121
Query: 124 DAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDE 183
+AA VLVGIPLETGQKQY+VDYKL+TY+KIARLYLED+DPVQAEA+INRASLLQ E+ +E
Sbjct: 122 NAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNE 181
Query: 184 TLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQ 243
LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+ ALK AL CTILASAGQQ
Sbjct: 182 QLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQ 241
Query: 244 RSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILE 303
RSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA+L PHQKA T DGSSIL+
Sbjct: 242 RSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILD 301
Query: 304 RAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHF 363
RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI EGRMNG++DQID IVHF
Sbjct: 302 RAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHF 361
Query: 364 ET 365
ET
Sbjct: 362 ET 363
>UNIPROTKB|D6RD63 [details] [associations]
symbol:COPS4 "COP9 signalosome complex subunit 4"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005634 Gene3D:1.10.10.10
InterPro:IPR011991 HOGENOM:HOG000158382 HGNC:HGNC:16702
ChiTaRS:COPS4 EMBL:AC021105 EMBL:AC073840 EMBL:AC108473
IPI:IPI00966084 ProteinModelPortal:D6RD63 SMR:D6RD63
Ensembl:ENST00000509317 ArrayExpress:D6RD63 Bgee:D6RD63
Uniprot:D6RD63
Length = 275
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 205/284 (72%), Positives = 241/284 (84%)
Query: 106 ASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQ 165
A++RQ LA + + +D A KQY+VDYKL+TY+KIARLYLED+DPVQ
Sbjct: 3 AAVRQDLAQLMNSSGSHKDLAG-----------KQYNVDYKLETYLKIARLYLEDDDPVQ 51
Query: 166 AEAFINRASLLQAETKDETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERI 225
AEA+INRASLLQ E+ +E LQ+HYKVCYARVLDYRRKFIEAAQRY+ELSYK I+ E+ER+
Sbjct: 52 AEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERL 111
Query: 226 TALKSALICTILASAGQQRSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAA 285
ALK AL CTILASAGQQRSRMLATLFKDERCQ L AY ILEKMYLDRIIR ++LQ+FAA
Sbjct: 112 EALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAA 171
Query: 286 LLKPHQKAITVDGSSILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMI 345
+L PHQKA T DGSSIL+RAV EHNLLSASKLYNNI+F ELGALL+I AAKAEKIAS MI
Sbjct: 172 MLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMI 231
Query: 346 CEGRMNGYVDQIDSIVHFETREILPSWDKQIESLCYRIDHIMEQ 389
EGRMNG++DQID IVHFETRE LP+WDKQI+SLC+++++++E+
Sbjct: 232 TEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNLLEK 275
>DICTYBASE|DDB_G0293844 [details] [associations]
symbol:csn4 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0293844 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 eggNOG:NOG298640 KO:K12178 OMA:YNELSYR EMBL:DQ309432
EMBL:AAFI02000222 RefSeq:XP_628938.1 HSSP:O88544
ProteinModelPortal:Q54B82 SMR:Q54B82 STRING:Q54B82 PRIDE:Q54B82
EnsemblProtists:DDB0233102 GeneID:8629446 KEGG:ddi:DDB_G0293844
ProtClustDB:CLSZ2429214 Uniprot:Q54B82
Length = 393
Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
Identities = 186/399 (46%), Positives = 283/399 (70%)
Query: 1 MDISTLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVS 60
MD++ LK Q+ +S HK + +KY+SIL+ +++++ L +F+ + +E+
Sbjct: 1 MDVNNLK-QILEETSALSDHKTKTEKYKSILQQLVESKQVAP----LKVFITHLTDESTP 55
Query: 61 LVISRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREE 120
LVISR IL ++ + P+++ + F LD++Q RV++FEEQV+ IR +LA +YER+E
Sbjct: 56 LVISRTILLSFTSSHKTLPEDIQMELGIFVLDRIQNRVVAFEEQVSEIRYNLAKLYERQE 115
Query: 121 NWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAET 180
NWR++A L+ IPL++ Q+ S +YK++ Y+KIARL+LE+E+ QAE +INRAS
Sbjct: 116 NWRESARCLIAIPLDSSQRVISPEYKVKIYVKIARLFLEEEESGQAETYINRASDSLHLV 175
Query: 181 KDETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASA 240
K++ L + +K C+AR++DY+R F++A+ RY +LS + + + ER+ AL A++C IL A
Sbjct: 176 KNQKLILAHKTCFARIMDYKRMFLKASLRYYDLS-QCLPKDTERMHALSCAIVCAILDKA 234
Query: 241 GQQRSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSS 300
G QRSR LATL+KDER Q L Y+ LEKM+L+RI++K+E++ FA LKPHQ A+ DG++
Sbjct: 235 GPQRSRTLATLYKDERSQQLGVYTFLEKMFLERILKKTEVKKFAEQLKPHQMALLSDGNT 294
Query: 301 ILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSI 360
+L+RAV EHNLLSASKLYNNI+F ELG+LL+I A KAEK+AS M+CE R+ G +DQI+ +
Sbjct: 295 VLDRAVIEHNLLSASKLYNNITFDELGSLLEIQAEKAEKVASKMVCEERLIGSIDQIERL 354
Query: 361 VHFET-REILPSWDKQIESLCYRIDHIMEQIETVQPEWL 398
+ FE + L WDK+IE LC +++I+E I PE++
Sbjct: 355 IQFENVGDSLTQWDKKIEGLCIHMNNIIESISKY-PEFI 392
>TAIR|locus:2159961 [details] [associations]
symbol:COP8 "AT5G42970" species:3702 "Arabidopsis
thaliana" [GO:0008180 "signalosome" evidence=IDA;TAS;IPI]
[GO:0009640 "photomorphogenesis" evidence=RCA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0043234
"protein complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0007275
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000085
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009585 EMBL:AB008264
GO:GO:0008180 GO:GO:0010388 EMBL:AF176089 EMBL:AF395060
EMBL:AY087068 EMBL:AK176360 IPI:IPI00545035 PIR:T52302
RefSeq:NP_199111.1 UniGene:At.23570 ProteinModelPortal:Q8L5U0
SMR:Q8L5U0 IntAct:Q8L5U0 STRING:Q8L5U0 PaxDb:Q8L5U0 PRIDE:Q8L5U0
EnsemblPlants:AT5G42970.1 GeneID:834312 KEGG:ath:AT5G42970
GeneFarm:4497 TAIR:At5g42970 eggNOG:NOG298640 HOGENOM:HOG000158382
InParanoid:Q8L5U0 KO:K12178 OMA:YNELSYR PhylomeDB:Q8L5U0
ProtClustDB:CLSN2686637 Genevestigator:Q8L5U0 GermOnline:AT5G42970
Uniprot:Q8L5U0
Length = 397
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 182/383 (47%), Positives = 257/383 (67%)
Query: 14 SSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVISRQILTDVST 73
+S G + + ++Y+ IL +L + D F++ I++++V LV+SRQ+L +
Sbjct: 8 ASAIGDQRQKIEQYKLILSSVLSSNDLLQAQR----FIDHILSDDVPLVVSRQLLQSFAQ 63
Query: 74 HLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIP 133
L E K ++ FTL ++QPRV+SFEEQ IR+ LA +YE E+ W AA +L GI
Sbjct: 64 ELGRLEPETQKEIAQFTLTQIQPRVVSFEEQALVIREKLAGLYESEQEWSKAAQMLSGID 123
Query: 134 LETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDETLQVHYKVCY 193
L++G + ++KL ++IARLYLED+D V AEAFIN+AS L + +++E L + YKVCY
Sbjct: 124 LDSGMRAVDDNFKLSKCIQIARLYLEDDDAVNAEAFINKASFLVSNSQNEVLNLQYKVCY 183
Query: 194 ARVLDYRRKFIEAAQRY---SELSYKPI----IDEAERITALKSALICTILASAGQQRSR 246
AR+LD +RKF+EAA RY S++ + I IDE AL +A+ CTILA AG QRSR
Sbjct: 184 ARILDMKRKFLEAALRYYGISQIEQRQIGDEEIDENALEQALSAAVTCTILAGAGPQRSR 243
Query: 247 MLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILERAV 306
+LATL+KDERC L Y IL+K+YL+RI+R+ E+ F+ L+PHQKA D S++L+RA+
Sbjct: 244 VLATLYKDERCSKLKIYPILQKVYLERILRRPEIDAFSEELRPHQKASLPDKSTVLDRAM 303
Query: 307 TEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFETR 366
EHNLLSASKLY NI F ELG LL I KAEKIA++MI + RM G +DQ ++++HFE
Sbjct: 304 IEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHFEDD 363
Query: 367 -EILPSWDKQIESLCYRIDHIME 388
E L WD+QI LC ++ I++
Sbjct: 364 VEELQQWDQQISGLCQALNDILD 386
>ASPGD|ASPL0000047008 [details] [associations]
symbol:csnD species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0008180
"signalosome" evidence=ISS;IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030448 "hyphal growth" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:AACD01000025 GO:GO:0008180 eggNOG:NOG298640
HOGENOM:HOG000158382 KO:K12178 HSSP:O88544 EMBL:AF236662
RefSeq:XP_659143.1 ProteinModelPortal:Q9C467 STRING:Q9C467
EnsemblFungi:CADANIAT00008166 GeneID:2875265 KEGG:ani:AN1539.2
OMA:QARISDY OrthoDB:EOG4SR158 Uniprot:Q9C467
Length = 408
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 147/393 (37%), Positives = 236/393 (60%)
Query: 10 LAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVISRQILT 69
LA + S A S +++ Y +L + + L +++++++E++S+V +R IL
Sbjct: 10 LAEIESSA-SPQNKLQLYNDLLSETVSASPEPQLADDLIYYLDSVLSEDLSIVAARPILD 68
Query: 70 DVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVL 129
L E V+ ++ +Q R S EEQ A IR+ LA YE EE + AA L
Sbjct: 69 SFIYTLRKLSSETQIKVAQHAVNLLQSRSASVEEQDAQIREILADAYEAEEEYIAAARAL 128
Query: 130 VGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDETLQVHY 189
GI +++ Q+ S K++ +++I RLYLE++D AEAF+NR L ++ +D L++H+
Sbjct: 129 QGIHIDSSQRLVSDSAKVKLWIRIVRLYLEEDDTTSAEAFLNRIKNLPSKIEDHELKLHF 188
Query: 190 KVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQRSRMLA 249
++ AR+ D RR+F++A+Q Y +S +DE++R+ AL +A+ C +LA AG QRSR LA
Sbjct: 189 RLSQARIQDARRRFLDASQEYFAVSLAAGVDESDRLQALAAAIRCAVLAPAGPQRSRTLA 248
Query: 250 TLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILERAVTEH 309
TL+KD+R + + ILEKM+LDR++ E+ FA L PHQ A T DG+++L++AV EH
Sbjct: 249 TLYKDDRATSVEEFGILEKMFLDRLLTPEEVSAFAQRLAPHQLAQTADGTTVLDKAVVEH 308
Query: 310 NLLSASKLYNNISFPELGALLQISAA-------KAEKIASHMICEGRMNGYVDQIDSIVH 362
NL++ASKLY NI LGA+L + A+ KAE A+ M+ +GR++G +DQID I++
Sbjct: 309 NLVAASKLYENIKTDALGAILGLQASGDLTAGEKAEAYAARMVEQGRLSGSIDQIDGIIY 368
Query: 363 FE-----TREILPSWDKQIESLCYRIDHIMEQI 390
FE T + WD ++ L ++ + I
Sbjct: 369 FESNTTATGRHIRQWDAGVQGLSEGVERVATNI 401
>UNIPROTKB|G4NCX3 [details] [associations]
symbol:MGG_00336 "COP9 signalosome complex subunit 4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:CM001235 Gene3D:1.10.10.10 InterPro:IPR011991 KO:K12178
RefSeq:XP_003718747.1 ProteinModelPortal:G4NCX3 SMR:G4NCX3
EnsemblFungi:MGG_00336T0 GeneID:2675149 KEGG:mgr:MGG_00336
Uniprot:G4NCX3
Length = 420
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 138/412 (33%), Positives = 227/412 (55%)
Query: 11 AALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSLVISRQILTD 70
AAL QA D A +L T T L ++A++N + +V + IL+
Sbjct: 8 AALE-QASQSNDAAAALEKLLVDFKSLSSPATATADLKRVIDAVLNAQLGVVSTLPILSA 66
Query: 71 -VSTHLVSQPDEVAKPVSHFTLDKVQPRV---ISFEEQVASIRQHLALIYEREENWRDAA 126
V+ + D++ V ++ L ++ SF EQ ++R+ +A +E E+W DAA
Sbjct: 67 FVNAVRQLENDDLWIEVGNYALQRIGENTQTASSFLEQSNALRELIATAHEHNEDWTDAA 126
Query: 127 NVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAETKDETLQ 186
L IPL++ Q++ + + ++ +++I R YLE +D A +++N+ + + +D L
Sbjct: 127 KTLAEIPLDSSQRRATEEEMVRVWIRIVRNYLEADDSTTAGSYLNKVKNVIFKVQDRDLN 186
Query: 187 VHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILASAGQQRSR 246
+H+++ AR+ D +R+F+ A+ Y E+S P I E ER+ L A+ C +LA AG RSR
Sbjct: 187 LHFRLSQARINDSQREFLAASHAYHEISLSPQIAEEERLHTLSMAIKCAVLAPAGPLRSR 246
Query: 247 MLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDGSSILERAV 306
L L++DER Y ILEKM+LDR++ E+ FA L PHQ A T DGS++L +AV
Sbjct: 247 ALGRLYRDERSAGQEEYGILEKMFLDRLLSPGEVDKFAQGLSPHQLATTADGSTVLAKAV 306
Query: 307 TEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFETR 366
EHNLL AS+LY+NI F ELG LL + AKAE+ + MI +GR+ G +DQ+D ++ FE+
Sbjct: 307 VEHNLLGASRLYDNIGFDELGELLGLDGAKAEETTARMIEQGRLVGRIDQVDRVIWFESG 366
Query: 367 EI----------------LPSWDKQIESLCYRIDHIMEQIETVQPEWLSKKM 402
E + WD ++ L ++H+ ++ P++++ +
Sbjct: 367 EASGVKGSGRAKVVVGKEIRRWDANVQDLAEEVEHVTSLLQKEYPDFVAANL 418
>WB|WBGene00000816 [details] [associations]
symbol:csn-4 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0030154 GO:GO:0002119 GO:GO:0040011
GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910
GO:GO:0040035 GO:GO:0008180 eggNOG:NOG298640 HOGENOM:HOG000158382
KO:K12178 GeneTree:ENSGT00530000063471 EMBL:FO081813
RefSeq:NP_500034.1 ProteinModelPortal:Q9N359 SMR:Q9N359
DIP:DIP-27076N IntAct:Q9N359 MINT:MINT-1078091 STRING:Q9N359
PaxDb:Q9N359 PRIDE:Q9N359 EnsemblMetazoa:Y55F3AM.15.1
EnsemblMetazoa:Y55F3AM.15.2 GeneID:176927 KEGG:cel:CELE_Y55F3AM.15
UCSC:Y55F3AM.15 CTD:176927 WormBase:Y55F3AM.15 InParanoid:Q9N359
OMA:LCNKYLP NextBio:894618 Uniprot:Q9N359
Length = 412
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 140/392 (35%), Positives = 222/392 (56%)
Query: 9 QLAALSSQAGSHKDQADKYRSILELIL-KN-QDTTTCTECLNLFVEAIVNENVSLVISRQ 66
++A + +Q HK Q + + L +N E + + I E S+V+SRQ
Sbjct: 10 EVAVIFAQDTDHKAQYEALAKLCNKYLPQNAMGRVDTAEIIKIIDTVIALETGSMVVSRQ 69
Query: 67 ILTDVSTHLVSQ--PDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWRD 124
++ ++ L +Q E K +S L ++ R IS+E+QV +R LA +YE+E +D
Sbjct: 70 FVSLITERLDNQHLESECVKAISEGILAIIKTRTISYEDQVCILRLMLASLYEKEGRIKD 129
Query: 125 AANVLVGIPLETGQK----QYSVD-YKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAE 179
AA L+ I +T K Q + + K Q ++I +L L+ + +AE ++NR S+L +
Sbjct: 130 AAQALIAINSDTSPKFNGPQAAKEGAKAQLCIRITKLLLDCSEIDEAEQYVNRTSILMVD 189
Query: 180 T-KDETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILA 238
+ +Q+ +K ARV D +R+F+EAAQRY ELS + ++++TAL A++C +LA
Sbjct: 190 LGANPDIQIEHKALQARVSDAKRRFVEAAQRYYELSATEQLPNSDKLTALGKAIVCVLLA 249
Query: 239 SAGQQRSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDG 298
G QRSR+L +FKDER ++ ++ KMYL ++I K EL++F L+ HQKA G
Sbjct: 250 KPGPQRSRLLTLIFKDERAPKCASFELIAKMYLTKVIHKDELEEFEHQLQDHQKA-DEHG 308
Query: 299 SSILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQID 358
SIL+ + EHN+ + S+LY NISF LG LL + AE +A MI R++GY+DQ +
Sbjct: 309 ESILKGVIQEHNITAISQLYINISFKTLGQLLGVDTEAAESMAGEMISSERLHGYIDQTN 368
Query: 359 SIVHFETREILPSWDKQIESLCYRIDHIMEQI 390
I+HFE + WD QI S +I+ + + I
Sbjct: 369 GILHFEDSNPMRVWDSQILSTLEQINKVSDMI 400
>UNIPROTKB|Q9N359 [details] [associations]
symbol:csn-4 "COP9 signalosome complex subunit 4"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0030154
GO:GO:0002119 GO:GO:0040011 GO:GO:0048477 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000910 GO:GO:0040035 GO:GO:0008180
eggNOG:NOG298640 HOGENOM:HOG000158382 KO:K12178
GeneTree:ENSGT00530000063471 EMBL:FO081813 RefSeq:NP_500034.1
ProteinModelPortal:Q9N359 SMR:Q9N359 DIP:DIP-27076N IntAct:Q9N359
MINT:MINT-1078091 STRING:Q9N359 PaxDb:Q9N359 PRIDE:Q9N359
EnsemblMetazoa:Y55F3AM.15.1 EnsemblMetazoa:Y55F3AM.15.2
GeneID:176927 KEGG:cel:CELE_Y55F3AM.15 UCSC:Y55F3AM.15 CTD:176927
WormBase:Y55F3AM.15 InParanoid:Q9N359 OMA:LCNKYLP NextBio:894618
Uniprot:Q9N359
Length = 412
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 140/392 (35%), Positives = 222/392 (56%)
Query: 9 QLAALSSQAGSHKDQADKYRSILELIL-KN-QDTTTCTECLNLFVEAIVNENVSLVISRQ 66
++A + +Q HK Q + + L +N E + + I E S+V+SRQ
Sbjct: 10 EVAVIFAQDTDHKAQYEALAKLCNKYLPQNAMGRVDTAEIIKIIDTVIALETGSMVVSRQ 69
Query: 67 ILTDVSTHLVSQ--PDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYEREENWRD 124
++ ++ L +Q E K +S L ++ R IS+E+QV +R LA +YE+E +D
Sbjct: 70 FVSLITERLDNQHLESECVKAISEGILAIIKTRTISYEDQVCILRLMLASLYEKEGRIKD 129
Query: 125 AANVLVGIPLETGQK----QYSVD-YKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAE 179
AA L+ I +T K Q + + K Q ++I +L L+ + +AE ++NR S+L +
Sbjct: 130 AAQALIAINSDTSPKFNGPQAAKEGAKAQLCIRITKLLLDCSEIDEAEQYVNRTSILMVD 189
Query: 180 T-KDETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDEAERITALKSALICTILA 238
+ +Q+ +K ARV D +R+F+EAAQRY ELS + ++++TAL A++C +LA
Sbjct: 190 LGANPDIQIEHKALQARVSDAKRRFVEAAQRYYELSATEQLPNSDKLTALGKAIVCVLLA 249
Query: 239 SAGQQRSRMLATLFKDERCQHLPAYSILEKMYLDRIIRKSELQDFAALLKPHQKAITVDG 298
G QRSR+L +FKDER ++ ++ KMYL ++I K EL++F L+ HQKA G
Sbjct: 250 KPGPQRSRLLTLIFKDERAPKCASFELIAKMYLTKVIHKDELEEFEHQLQDHQKA-DEHG 308
Query: 299 SSILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQID 358
SIL+ + EHN+ + S+LY NISF LG LL + AE +A MI R++GY+DQ +
Sbjct: 309 ESILKGVIQEHNITAISQLYINISFKTLGQLLGVDTEAAESMAGEMISSERLHGYIDQTN 368
Query: 359 SIVHFETREILPSWDKQIESLCYRIDHIMEQI 390
I+HFE + WD QI S +I+ + + I
Sbjct: 369 GILHFEDSNPMRVWDSQILSTLEQINKVSDMI 400
>DICTYBASE|DDB_G0281051 [details] [associations]
symbol:psmD12 "26S proteasome non-ATPase regulatory
subunit 12" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0281051 GenomeReviews:CM000152_GR EMBL:AAFI02000040
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5071
GO:GO:0005838 KO:K03035 OMA:WDALNEN RefSeq:XP_640786.1
ProteinModelPortal:Q54UJ0 STRING:Q54UJ0 PRIDE:Q54UJ0
EnsemblProtists:DDB0232995 GeneID:8622839 KEGG:ddi:DDB_G0281051
ProtClustDB:CLSZ2729043 Uniprot:Q54UJ0
Length = 447
Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 80/328 (24%), Positives = 148/328 (45%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQT 149
TL + I E + A + + L+ I E E + AA +L + +ET + K+
Sbjct: 128 TLRTISDGKIFVENERARLTKTLSKIKEDEGDIASAAKILQDLQVETYGTMEKRE-KITF 186
Query: 150 YMKIARLYLEDEDPVQAEAF---INRASLLQAETKDETLQVHYKVCYARVLDYRRKFIEA 206
++ R+ + ++D ++A+ +NR +L + E +D L++ Y R + +IE
Sbjct: 187 FIDQMRICMNNKDFIRAQLIGNKVNRKTLAEDENQD--LKIDYFKQMIRYFSHSANYIEI 244
Query: 207 AQRYSELSYKPII--DEAERITALKSALICTILASAGQQRSRMLATLFKDERCQHLPAYS 264
A+ Y + P + D + + LK I IL+++ ++S +L +++ + + Y
Sbjct: 245 ARCYLSIYDTPSVEKDTPQLLQTLKYICIYVILSASSNEQSDLLNRVYEFKPLTDIQNYK 304
Query: 265 -ILEKMYLDRIIRKSELQDFAALLKPHQKAITV-----DGSSILERAVTEHNLLSASKLY 318
+L + +IR S F L KP + TV + L + V EHN+ S Y
Sbjct: 305 DLLNQFKTLELIRWST---FFELNKPELDSQTVFKTEPNAWEDLRKRVIEHNIRVISTYY 361
Query: 319 NNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----REILPSWDK 374
IS L LL +S ++EK S ++ + +D+ I F T ++L +W
Sbjct: 362 QKISTARLAELLDLSLDESEKFVSDLVSNKTIFAKIDRPAGIATFTTTNDPNKVLNAWAN 421
Query: 375 QIESLCYRIDHIMEQIETVQPEWLSKKM 402
I SL +D + + VQ E++ K+
Sbjct: 422 NITSL---LDLVEKTNHLVQREFMLHKI 446
>UNIPROTKB|O00232 [details] [associations]
symbol:PSMD12 "26S proteasome non-ATPase regulatory subunit
12" species:9606 "Homo sapiens" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051436
EMBL:CH471099 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383
eggNOG:COG5071 GO:GO:0005838 CTD:5718 HOGENOM:HOG000194265
HOVERGEN:HBG053739 KO:K03035 OMA:WDALNEN EMBL:AB003103
EMBL:AK091198 EMBL:AK222679 EMBL:AC110921 EMBL:BC019062
EMBL:BC065826 IPI:IPI00185374 IPI:IPI00335069 PIR:PC6501
RefSeq:NP_002807.1 RefSeq:NP_777360.1 UniGene:Hs.592689
ProteinModelPortal:O00232 SMR:O00232 DIP:DIP-27549N IntAct:O00232
MINT:MINT-5003729 STRING:O00232 PhosphoSite:O00232 PaxDb:O00232
PeptideAtlas:O00232 PRIDE:O00232 DNASU:5718 Ensembl:ENST00000356126
Ensembl:ENST00000357146 GeneID:5718 KEGG:hsa:5718 UCSC:uc002jfy.3
GeneCards:GC17M065334 HGNC:HGNC:9557 HPA:HPA023119 MIM:604450
neXtProt:NX_O00232 PharmGKB:PA33903 InParanoid:O00232
OrthoDB:EOG46DM2P PhylomeDB:O00232 GenomeRNAi:5718 NextBio:22216
ArrayExpress:O00232 Bgee:O00232 CleanEx:HS_PSMD12
Genevestigator:O00232 GermOnline:ENSG00000197170 Uniprot:O00232
Length = 456
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 77/330 (23%), Positives = 156/330 (47%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLET-G--QKQYSVDYK 146
TL V I E + A + + LA I E+ + ++AA++L + +ET G +K+ V++
Sbjct: 127 TLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKKERVEFI 186
Query: 147 LQTYMKIARLYLEDEDPVQAEAFINRASL-LQAETKDETLQVHYKVCYARVLDYRRKFIE 205
L+ RL L +D ++ + + + E E L++ Y ++ + ++
Sbjct: 187 LEQM----RLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKYYNLMIQLDQHEGSYLS 242
Query: 206 AAQRYSELSYKPIID-EAERIT-ALKSALICTILASAGQQRSRMLATLFKDERCQHLPAY 263
+ Y + P I E+E+ ALKS ++ ILA ++S ++ + D++ + +P Y
Sbjct: 243 ICKHYRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIPKY 302
Query: 264 SILEKMYLD-RIIRKSEL-QDFAALLKP---HQKAITVDGSSI--------LERAVTEHN 310
L K++ ++R S L +D+ L+ A V GS+ L+ V EHN
Sbjct: 303 KDLLKLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGSTEEGEKRWKDLKNRVVEHN 362
Query: 311 LLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----R 366
+ +K Y I+ + LL +S ++E S+++ + VD++ I++F+
Sbjct: 363 IRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPN 422
Query: 367 EILPSWDKQIESLCYRID---HIMEQIETV 393
+L W +++ SL ++ H++ + E +
Sbjct: 423 NLLNDWSQKLNSLMSLVNKTTHLIAKEEMI 452
>UNIPROTKB|Q5RBI3 [details] [associations]
symbol:PSMD12 "26S proteasome non-ATPase regulatory subunit
12" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0022624
CTD:5718 HOVERGEN:HBG053739 KO:K03035 EMBL:CR858665
RefSeq:NP_001125501.1 UniGene:Pab.487 ProteinModelPortal:Q5RBI3
PRIDE:Q5RBI3 GeneID:100172410 KEGG:pon:100172410 InParanoid:Q5RBI3
Uniprot:Q5RBI3
Length = 456
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 77/330 (23%), Positives = 156/330 (47%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLET-G--QKQYSVDYK 146
TL V I E + A + + LA I E+ + ++AA++L + +ET G +K+ V++
Sbjct: 127 TLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKKERVEFI 186
Query: 147 LQTYMKIARLYLEDEDPVQAEAFINRASL-LQAETKDETLQVHYKVCYARVLDYRRKFIE 205
L+ RL L +D ++ + + + E E L++ Y ++ + ++
Sbjct: 187 LEQM----RLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKYYNLMIQLDQHEGSYLS 242
Query: 206 AAQRYSELSYKPIID-EAERIT-ALKSALICTILASAGQQRSRMLATLFKDERCQHLPAY 263
+ Y + P I E+E+ ALKS ++ ILA ++S ++ + D++ + +P Y
Sbjct: 243 ICKHYRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIPKY 302
Query: 264 SILEKMYLD-RIIRKSEL-QDFAALLKP---HQKAITVDGSSI--------LERAVTEHN 310
L K++ ++R S L +D+ L+ A V GS+ L+ V EHN
Sbjct: 303 KDLLKLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGSTEEGEKRWKDLKNRVVEHN 362
Query: 311 LLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----R 366
+ +K Y I+ + LL +S ++E S+++ + VD++ I++F+
Sbjct: 363 IRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPN 422
Query: 367 EILPSWDKQIESLCYRID---HIMEQIETV 393
+L W +++ SL ++ H++ + E +
Sbjct: 423 NLLNDWSQKLNSLMSLVNKTTHLIAKEEMI 452
>UNIPROTKB|Q2KJ25 [details] [associations]
symbol:PSMD12 "26S proteasome non-ATPase regulatory subunit
12" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00530000063471 eggNOG:COG5071 GO:GO:0022624
EMBL:BC105555 IPI:IPI00702341 RefSeq:NP_001039893.1
UniGene:Bt.59590 ProteinModelPortal:Q2KJ25 STRING:Q2KJ25
PRIDE:Q2KJ25 Ensembl:ENSBTAT00000003145 GeneID:538204
KEGG:bta:538204 CTD:5718 HOGENOM:HOG000194265 HOVERGEN:HBG053739
KO:K03035 OMA:WDALNEN NextBio:20877306 Uniprot:Q2KJ25
Length = 456
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 76/330 (23%), Positives = 155/330 (46%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLET-G--QKQYSVDYK 146
TL V I E + A + + LA I E+ + ++AA++L + +ET G +K+ V++
Sbjct: 127 TLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKKERVEFI 186
Query: 147 LQTYMKIARLYLEDEDPVQAEAFINRASL-LQAETKDETLQVHYKVCYARVLDYRRKFIE 205
L+ RL L +D ++ + + + E E L++ Y ++ + ++
Sbjct: 187 LEQM----RLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKYYNLMIQLDQHEGSYLS 242
Query: 206 AAQRYSELSYKPIID-EAERIT-ALKSALICTILASAGQQRSRMLATLFKDERCQHLPAY 263
+ Y + P I E+E+ ALKS ++ ILA ++S ++ + D++ + +P Y
Sbjct: 243 ICKHYRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIPKY 302
Query: 264 SILEKMYLD-RIIRKSEL-QDFAALLK------PHQKAI--TVDGSSI---LERAVTEHN 310
L K++ ++R S L +D+ L+ P T +G L+ V EHN
Sbjct: 303 KDLLKLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGYTEEGEKRWKDLKNRVVEHN 362
Query: 311 LLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----R 366
+ +K Y I+ + LL +S ++E S+++ + VD++ I++F+
Sbjct: 363 IRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPN 422
Query: 367 EILPSWDKQIESLCYRID---HIMEQIETV 393
+L W +++ SL ++ H++ + E +
Sbjct: 423 NLLNDWSQKLNSLMSLVNKTTHLIAKEEMI 452
>UNIPROTKB|F1RSM2 [details] [associations]
symbol:PSMD12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 GeneTree:ENSGT00530000063471 KO:K03035
OMA:WDALNEN EMBL:CU466377 RefSeq:XP_003483009.1
Ensembl:ENSSSCT00000018803 GeneID:100524394 KEGG:ssc:100524394
Uniprot:F1RSM2
Length = 456
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 76/330 (23%), Positives = 155/330 (46%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLET-G--QKQYSVDYK 146
TL V I E + A + + LA I E+ + ++AA++L + +ET G +K+ V++
Sbjct: 127 TLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKKERVEFI 186
Query: 147 LQTYMKIARLYLEDEDPVQAEAFINRASL-LQAETKDETLQVHYKVCYARVLDYRRKFIE 205
L+ RL L +D ++ + + + E E L++ Y ++ + ++
Sbjct: 187 LEQM----RLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKYYNLMIQLDQHEGSYLS 242
Query: 206 AAQRYSELSYKPIID-EAERIT-ALKSALICTILASAGQQRSRMLATLFKDERCQHLPAY 263
+ Y + P I E+E+ ALKS ++ ILA ++S ++ + D++ + +P Y
Sbjct: 243 ICKHYRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIPKY 302
Query: 264 SILEKMYLD-RIIRKSEL-QDFAALLK------PHQKAI--TVDGSSI---LERAVTEHN 310
L K++ ++R S L +D+ L+ P T +G L+ V EHN
Sbjct: 303 KDLLKLFTTMELMRWSTLVEDYGMELRKGSLESPATDVFGYTEEGEKRWKDLKNRVVEHN 362
Query: 311 LLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----R 366
+ +K Y I+ + LL +S ++E S+++ + VD++ I++F+
Sbjct: 363 IRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPN 422
Query: 367 EILPSWDKQIESLCYRID---HIMEQIETV 393
+L W +++ SL ++ H++ + E +
Sbjct: 423 NLLNDWSQKLNSLMSLVNKTTHLIAKEEMI 452
>ZFIN|ZDB-GENE-030131-617 [details] [associations]
symbol:psmd12 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 12" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-617 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GeneTree:ENSGT00530000063471
CTD:5718 HOVERGEN:HBG053739 KO:K03035 OMA:WDALNEN EMBL:CR759902
EMBL:BC042325 IPI:IPI00511230 RefSeq:NP_963872.1 UniGene:Dr.51730
STRING:Q8AW07 Ensembl:ENSDART00000126186 GeneID:321898
KEGG:dre:321898 InParanoid:Q8AW07 NextBio:20807575 Uniprot:Q8AW07
Length = 456
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 73/328 (22%), Positives = 154/328 (46%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQT 149
TL V I E + A + + LA I E+ + ++AA +L + +ET + K +
Sbjct: 127 TLRTVTAGKIYVEIERARLTKTLAHIKEQSGDVKEAAAILQELQVETYGSMEKKE-KAEF 185
Query: 150 YMKIARLYLEDEDPVQAEAFINRAS--LLQAETKDETLQVHYKVCYARVLDYRRKFIEAA 207
++ RL + +D ++ + + + Q E +E L++ Y +V + ++
Sbjct: 186 ILEQMRLCIAVKDYIRTQIISKKINTKFFQEEGTEE-LKLKYYNLMIQVDLHEGSYLSIC 244
Query: 208 QRYSELSYKPII--DEAERITALKSALICTILASAGQQRSRMLATLFKDERCQHLPAYSI 265
+ Y + P I D ++ ALKS ++ ILA ++S ++ + D++ + +P Y
Sbjct: 245 KHYRAIYDTPCILEDSSKWQQALKSVVLYVILAPYDNEQSDLVHRISTDKKLEEIPKYRD 304
Query: 266 LEKMYLD-RIIR-KSELQDFAALLK------PHQKAITV--DGSSI---LERAVTEHNLL 312
L K + ++R S ++D+ L+ P T +G L+ V EHN+
Sbjct: 305 LLKQFTTMELMRWSSVVEDYGKELREGSMGTPDTDVFTCTEEGEKRWKDLKNRVVEHNIR 364
Query: 313 SASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----REI 368
+K Y +I+ + ALL +S ++E+ S+++ + VD++ I++F+ ++
Sbjct: 365 IMAKYYTSITMGRMAALLDLSVDESEEFLSNLVVNKTIYAKVDRLAGIINFQRPKDPNDL 424
Query: 369 LPSWDKQIESLCYRID---HIMEQIETV 393
L W +++ SL ++ H++ + E +
Sbjct: 425 LNDWSQKLNSLMSLVNKTTHLIAKEEMI 452
>MGI|MGI:1914247 [details] [associations]
symbol:Psmd12 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 12" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0022624 "proteasome accessory complex"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1914247 Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:CH466558
GeneTree:ENSGT00530000063471 eggNOG:COG5071 EMBL:AL645687
GO:GO:0022624 CTD:5718 HOGENOM:HOG000194265 HOVERGEN:HBG053739
KO:K03035 OMA:WDALNEN OrthoDB:EOG46DM2P EMBL:AK007619 EMBL:AK007680
EMBL:AK009969 EMBL:AK017843 EMBL:AK151242 EMBL:AL683815
EMBL:BC004694 IPI:IPI00318982 RefSeq:NP_080170.1 UniGene:Mm.21667
ProteinModelPortal:Q9D8W5 SMR:Q9D8W5 IntAct:Q9D8W5 STRING:Q9D8W5
PhosphoSite:Q9D8W5 PaxDb:Q9D8W5 PRIDE:Q9D8W5
Ensembl:ENSMUST00000021063 GeneID:66997 KEGG:mmu:66997
InParanoid:Q9CQT4 NextBio:323262 Bgee:Q9D8W5 Genevestigator:Q9D8W5
GermOnline:ENSMUSG00000020720 Uniprot:Q9D8W5
Length = 456
Score = 185 (70.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 73/330 (22%), Positives = 155/330 (46%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLET-G--QKQYSVDYK 146
TL V I E + A + + LA I E+ + ++AA++L + +ET G +K+ V++
Sbjct: 127 TLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKKERVEFI 186
Query: 147 LQTYMKIARLYLEDEDPVQAEAFINRASL-LQAETKDETLQVHYKVCYARVLDYRRKFIE 205
L+ RL L +D ++ + + + E E L++ Y ++ + ++
Sbjct: 187 LEQM----RLCLAVKDYIRTQIISKKINTKFFQEENTENLKLKYYNLMIQLDQHEGSYLS 242
Query: 206 AAQRYSELSYKPIID-EAERIT-ALKSALICTILASAGQQRSRMLATLFKDERCQHLPAY 263
+ Y + P I E+++ ALKS ++ ILA ++S ++ + D++ + +P Y
Sbjct: 243 ICKHYRAIYDTPCIQAESDKWQQALKSVVLYVILAPFDNEQSDLVHRISSDKKLEEIPKY 302
Query: 264 SILEKMYLD-RIIRKSEL-QDFAALLKPHQK--------AITVDGSSI---LERAVTEHN 310
L K++ ++R S L +D+ L+ + T +G L+ V EHN
Sbjct: 303 KDLLKLFTTMELMRWSTLVEDYGVELRKGSSETPATDVFSSTEEGEKRWKDLKSRVVEHN 362
Query: 311 LLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----R 366
+ +K Y I+ + LL +S ++E S+++ + VD++ +++F+
Sbjct: 363 IRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGVINFQRPKDPN 422
Query: 367 EILPSWDKQIESLCYRID---HIMEQIETV 393
+L W +++ SL ++ H++ + E +
Sbjct: 423 NLLNDWSQKLNSLMSLVNKTTHLIAKEEMI 452
>RGD|1359305 [details] [associations]
symbol:Psmd12 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 12" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0022624 "proteasome
accessory complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 RGD:1359305
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502
GeneTree:ENSGT00530000063471 eggNOG:COG5071 CTD:5718
HOGENOM:HOG000194265 HOVERGEN:HBG053739 KO:K03035 OMA:WDALNEN
OrthoDB:EOG46DM2P EMBL:BC083758 IPI:IPI00198978
RefSeq:NP_001005875.1 UniGene:Rn.15873 IntAct:Q5XIC6 STRING:Q5XIC6
Ensembl:ENSRNOT00000004283 GeneID:287772 KEGG:rno:287772
UCSC:RGD:1359305 InParanoid:Q5XIC6 NextBio:626983
Genevestigator:Q5XIC6 Uniprot:Q5XIC6
Length = 456
Score = 185 (70.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 73/330 (22%), Positives = 155/330 (46%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLET-G--QKQYSVDYK 146
TL V I E + A + + LA I E+ + ++AA++L + +ET G +K+ V++
Sbjct: 127 TLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKKERVEFI 186
Query: 147 LQTYMKIARLYLEDEDPVQAEAFINRASL-LQAETKDETLQVHYKVCYARVLDYRRKFIE 205
L+ RL L +D ++ + + + E E L++ Y ++ + ++
Sbjct: 187 LEQM----RLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKYYNLMIQLDQHEGSYLS 242
Query: 206 AAQRYSELSYKPIID-EAERIT-ALKSALICTILASAGQQRSRMLATLFKDERCQHLPAY 263
+ Y + P I E+++ ALKS ++ ILA ++S ++ + D++ + +P Y
Sbjct: 243 ICKHYRAIYDTPCIQAESDKWQQALKSVVLYVILAPFDNEQSDLVHRISSDKKLEEIPKY 302
Query: 264 SILEKMYLD-RIIRKSEL-QDFAALLKPHQK--------AITVDGSSI---LERAVTEHN 310
L K++ ++R S L +D+ L+ + T +G L+ V EHN
Sbjct: 303 KDLLKLFTTMELMRWSTLVEDYGVELRKGSSETPATDVFSSTEEGEKRWKDLKNRVVEHN 362
Query: 311 LLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----R 366
+ +K Y I+ + LL +S ++E S+++ + VD++ +++F+
Sbjct: 363 IRIMAKYYTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGVINFQRPKDPN 422
Query: 367 EILPSWDKQIESLCYRID---HIMEQIETV 393
+L W +++ SL ++ H++ + E +
Sbjct: 423 NLLNDWSQKLNSLMSLVNKTTHLIAKEEMI 452
>SGD|S000002306 [details] [associations]
symbol:RPN5 "Subunit of the CSN and 26S proteasome lid
complexes" species:4932 "Saccharomyces cerevisiae" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0010388 "cullin deneddylation" evidence=IMP] [GO:0008180
"signalosome" evidence=IDA] [GO:0034515 "proteasome storage
granule" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IEA;IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
SGD:S000002306 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008541 GO:GO:0006511 GO:GO:0008180 EMBL:X97751 GO:GO:0010388
GeneTree:ENSGT00530000063471 eggNOG:COG5071 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000194265 KO:K03035 OMA:WDALNEN
OrthoDB:EOG41G6CN EMBL:Z74195 PIR:S67695 RefSeq:NP_010134.1
ProteinModelPortal:Q12250 SMR:Q12250 DIP:DIP-1578N IntAct:Q12250
MINT:MINT-391026 STRING:Q12250 PaxDb:Q12250 PeptideAtlas:Q12250
EnsemblFungi:YDL147W GeneID:851408 KEGG:sce:YDL147W NextBio:968585
Genevestigator:Q12250 GermOnline:YDL147W Uniprot:Q12250
Length = 445
Score = 183 (69.5 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 91/407 (22%), Positives = 182/407 (44%)
Query: 2 DISTLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSL 61
D ++ QL L + D A + +L I+ + + LN + + ++ L
Sbjct: 31 DCNSALDQLLVLEKKTRQASDLASS-KEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQL 89
Query: 62 VISRQ-ILTDVSTHLVSQPD-EVAKPVSHF-TLDKVQPRVISFEEQVASIRQHLALIYER 118
+S Q ++ V +L S ++ +S T+ V I E + A + + L I +
Sbjct: 90 KLSIQYMIQKVMEYLKSSKSLDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKE 149
Query: 119 EENWRDAANVLVGIPLET-GQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQ 177
E +AA++L + +ET G + S K+Q ++ L + D QA ++R L +
Sbjct: 150 EGKIDEAADILCELQVETYGSMEMSE--KIQFILEQMELSILKGDYSQATV-LSRKILKK 206
Query: 178 A--ETKDETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPII--DEAERITALKSALI 233
K E+L++ Y ++ ++R+++E AQ E+ I DEA+ L +
Sbjct: 207 TFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEAKWKPVLSHIVY 266
Query: 234 CTILASAGQQRSRMLATLFKDERCQHLPAYSILEKMYL-DRIIRKSELQD-FAALLKPHQ 291
+L+ G ++ ++ + D + L + L K++ + ++R +Q + +L
Sbjct: 267 FLVLSPYGNLQNDLIHKIQNDNNLKKLESQESLVKLFTTNELMRWPIVQKTYEPVLNEDD 326
Query: 292 KAITVDGSSI----LERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICE 347
A + + L++ V EHNL S+ Y+ I+ L LL ++ ++ E S ++ +
Sbjct: 327 LAFGGEANKHHWEDLQKRVIEHNLRVISEYYSRITLLRLNELLDLTESQTETYISDLVNQ 386
Query: 348 GRMNGYVDQIDSIVHFETREILPSWDKQI-ESLCYRIDHIMEQIETV 393
G + V++ IV+FE P Q+ + +D ++E IET+
Sbjct: 387 GIIYAKVNRPAKIVNFEK----PKNSSQLLNEWSHNVDELLEHIETI 429
>POMBASE|SPAC22A12.03c [details] [associations]
symbol:csn4 "COP9/signalosome complex subunit Csn4"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 PomBase:SPAC22A12.03c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG298640
OrthoDB:EOG4SR158 PIR:T38143 RefSeq:NP_593233.1
ProteinModelPortal:O13895 IntAct:O13895 STRING:O13895
EnsemblFungi:SPAC22A12.03c.1 GeneID:2541517 KEGG:spo:SPAC22A12.03c
OMA:HEINEIA NextBio:20802615 Uniprot:O13895
Length = 377
Score = 178 (67.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 66/265 (24%), Positives = 119/265 (44%)
Query: 103 EQVASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDED 162
E + S LA IYE E+N+ + L + + G + ++ L +++ YL+
Sbjct: 92 EYLVSCCLQLATIYEAEQNFELLCSSLEAVE-KHGHFENDLEQLLLLRIRLGDAYLKLGK 150
Query: 163 PVQAEAFINRASLLQAETKDETLQVHYKVCYARVLDYRRKFIEAAQRYSE-LSYKPIIDE 221
+A + + L + ++ L + ++C AR LD +F+EAA+ Y L YK +E
Sbjct: 151 AEKAILTVRTSIPLAFKVSNDQLLMELQLCNARALDETGQFLEAAKCYYRVLQYKVPGNE 210
Query: 222 AERITALKSALICTILASAGQQRSRMLATLFKDERCQHLPAYSILEKMYLDR-IIRKSEL 280
L S C +LA + L + + +P YS++EK YL R I K +
Sbjct: 211 LIYRENLCSVAQCLLLAIPSPIVLQFLQEISLQPSVREIPFYSLVEK-YLKRKFIGKEDG 269
Query: 281 QDFAALLKPHQKAITVDGSSILE--RAVTEHNLLSASKLYNNISFPELGALLQISAAKAE 338
L PHQ + + ++E R E N+L S+ + S L ++S + +
Sbjct: 270 AFLLPFLLPHQ---VIHMNRLIEDGRHFLETNILFLSEFFEVSSTSILAKHFKLSEEQVD 326
Query: 339 KIASHMICEGRMNGYVDQIDSIVHF 363
+ + M+ + R+N +DQ + + F
Sbjct: 327 TVVADMVIQERLNASIDQCEGYITF 351
>UNIPROTKB|F1NPQ0 [details] [associations]
symbol:LOC100859465 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 GeneTree:ENSGT00530000063471
KO:K03035 OMA:WDALNEN EMBL:AADN02030024 IPI:IPI00589463
RefSeq:XP_003642387.1 Ensembl:ENSGALT00000005864 GeneID:100859465
KEGG:gga:100859465 Uniprot:F1NPQ0
Length = 456
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 74/330 (22%), Positives = 154/330 (46%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLET-G--QKQYSVDYK 146
TL V I E + A + + LA I E+ ++AA++L + +ET G +K+ V++
Sbjct: 127 TLRTVTEGKIYVEIERARLTKTLATIKEQNGEVKEAASILQELQVETYGSMEKKERVEFI 186
Query: 147 LQTYMKIARLYLEDEDPVQAEAFINRASL-LQAETKDETLQVHYKVCYARVLDYRRKFIE 205
L+ RL L +D ++ + + + E E L++ Y ++ + ++
Sbjct: 187 LEQM----RLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKYYNLMIQLDQHEGSYLS 242
Query: 206 AAQRYSELSYKPIID-EAERIT-ALKSALICTILASAGQQRSRMLATLFKDERCQHLPAY 263
+ Y + P I E+E+ ALKS ++ IL+ ++S ++ + D++ + +P Y
Sbjct: 243 ICKHYRAIYDTPCIQAESEKWQQALKSVVLYVILSPYDNEQSDLVHRISSDKKLEEIPKY 302
Query: 264 SILEKMYLD-RIIRKSEL-QDFAALLK------PHQKAI--TVDGSSI---LERAVTEHN 310
L K++ ++R + L +++ L+ P T +G L+ V EHN
Sbjct: 303 KDLLKLFTTMELMRWTALVEEYGKELREGSLDSPATDVFGCTEEGEKRWKDLKNRVVEHN 362
Query: 311 LLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFET----R 366
+ +K Y I+ + LL +S ++E+ S+++ + VD++ I++F+
Sbjct: 363 IRIMAKYYTRITMKRMAQLLDLSVDESEEFLSNLVVNKTIFAKVDRLAGIINFQRPKDPN 422
Query: 367 EILPSWDKQIESLCYRID---HIMEQIETV 393
IL W ++ SL ++ H++ + E +
Sbjct: 423 NILNDWSHKLNSLMALVNKTTHLIAKEEMI 452
>GENEDB_PFALCIPARUM|PF10_0174 [details] [associations]
symbol:PF10_0174 "26s proteasome subunit p55,
putative" species:5833 "Plasmodium falciparum" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0004175 GO:GO:0006511 EMBL:AE014185
GO:GO:0005838 HOGENOM:HOG000194265 KO:K03035 OMA:CDEKIPL
RefSeq:XP_001347459.1 ProteinModelPortal:Q8IJM0 PRIDE:Q8IJM0
EnsemblProtists:PF10_0174:mRNA GeneID:810332 KEGG:pfa:PF10_0174
EuPathDB:PlasmoDB:PF3D7_1017900 ProtClustDB:CLSZ2433075
Uniprot:Q8IJM0
Length = 467
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 74/322 (22%), Positives = 146/322 (45%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQT 149
TL V I E + + + + L+ I E + N +AAN+L + +ET D K +
Sbjct: 132 TLCLVSEGKIFVEVERSEVIRMLSKIKEEDGNIEEAANILQDVQVETFISMNKRD-KTEY 190
Query: 150 YMKIARLYLEDEDPVQAEAFINRA--SLLQAETKDETLQVHYKVCYARVLDYRRKFIEAA 207
++ RL L +D ++ + SLL E + L++ Y + + +++ A
Sbjct: 191 ILEQMRLVLLRKDFIRCHVISRKINPSLLNTEEFAD-LKLKYYMYMIQYYINEESYLDVA 249
Query: 208 QRYSELSYKPII--DEAERITALKSALICTILASAGQQRSRMLATLFK--DERCQHLPAY 263
+ Y E + I+ D I +K +I IL+ +Q+++ L+ L K ++ + +P Y
Sbjct: 250 KCYEERFHTDIVLNDRNLWIDEMKCYIIFLILSPYDEQQNK-LSNLLKMQKKKLKEIPIY 308
Query: 264 SILEKMYLDRIIRKSELQDFAALLK--PHQKAITVDGSS---ILERAVTEHNLLSASKLY 318
L + ++++ + + L L +I + G + + ++ V HN+ S Y
Sbjct: 309 QNLVQDFIEQDLIQWPLPYQQELFNFFIFDDSIFLGGQNRKDLFKKKVMHHNIHVISNCY 368
Query: 319 NNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFETRE----ILPSWDK 374
+ IS L LL S +E + S ++ +N +D+++ I+ F ++ +L SW
Sbjct: 369 DQISLNRLAQLLNASIEDSENLLSELVSAKFINSKIDRLNGIIKFGQKKNPENLLNSWSL 428
Query: 375 QIESLCYRIDHIMEQIETVQPE 396
QI + +D + E +Q E
Sbjct: 429 QINDI---LDLLEESSHLIQKE 447
>UNIPROTKB|Q8IJM0 [details] [associations]
symbol:PF10_0174 "26s proteasome subunit p55, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0004175 GO:GO:0006511 EMBL:AE014185 GO:GO:0005838
HOGENOM:HOG000194265 KO:K03035 OMA:CDEKIPL RefSeq:XP_001347459.1
ProteinModelPortal:Q8IJM0 PRIDE:Q8IJM0
EnsemblProtists:PF10_0174:mRNA GeneID:810332 KEGG:pfa:PF10_0174
EuPathDB:PlasmoDB:PF3D7_1017900 ProtClustDB:CLSZ2433075
Uniprot:Q8IJM0
Length = 467
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 74/322 (22%), Positives = 146/322 (45%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQT 149
TL V I E + + + + L+ I E + N +AAN+L + +ET D K +
Sbjct: 132 TLCLVSEGKIFVEVERSEVIRMLSKIKEEDGNIEEAANILQDVQVETFISMNKRD-KTEY 190
Query: 150 YMKIARLYLEDEDPVQAEAFINRA--SLLQAETKDETLQVHYKVCYARVLDYRRKFIEAA 207
++ RL L +D ++ + SLL E + L++ Y + + +++ A
Sbjct: 191 ILEQMRLVLLRKDFIRCHVISRKINPSLLNTEEFAD-LKLKYYMYMIQYYINEESYLDVA 249
Query: 208 QRYSELSYKPII--DEAERITALKSALICTILASAGQQRSRMLATLFK--DERCQHLPAY 263
+ Y E + I+ D I +K +I IL+ +Q+++ L+ L K ++ + +P Y
Sbjct: 250 KCYEERFHTDIVLNDRNLWIDEMKCYIIFLILSPYDEQQNK-LSNLLKMQKKKLKEIPIY 308
Query: 264 SILEKMYLDRIIRKSELQDFAALLK--PHQKAITVDGSS---ILERAVTEHNLLSASKLY 318
L + ++++ + + L L +I + G + + ++ V HN+ S Y
Sbjct: 309 QNLVQDFIEQDLIQWPLPYQQELFNFFIFDDSIFLGGQNRKDLFKKKVMHHNIHVISNCY 368
Query: 319 NNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFETRE----ILPSWDK 374
+ IS L LL S +E + S ++ +N +D+++ I+ F ++ +L SW
Sbjct: 369 DQISLNRLAQLLNASIEDSENLLSELVSAKFINSKIDRLNGIIKFGQKKNPENLLNSWSL 428
Query: 375 QIESLCYRIDHIMEQIETVQPE 396
QI + +D + E +Q E
Sbjct: 429 QINDI---LDLLEESSHLIQKE 447
>TAIR|locus:2176100 [details] [associations]
symbol:RPN5B "AT5G64760" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 Gene3D:1.10.10.10
InterPro:IPR011991 UniGene:At.27199 UniGene:At.71233 GO:GO:0030163
GO:GO:0000502 eggNOG:COG5071 KO:K03035 OMA:CDEKIPL EMBL:AY062093
EMBL:AY062113 EMBL:AY124872 EMBL:AY230833 IPI:IPI00543192
RefSeq:NP_568994.2 ProteinModelPortal:Q8VWK0 SMR:Q8VWK0
IntAct:Q8VWK0 STRING:Q8VWK0 PaxDb:Q8VWK0 PRIDE:Q8VWK0
EnsemblPlants:AT5G64760.1 GeneID:836597 KEGG:ath:AT5G64760
ProtClustDB:CLSN2687519 Genevestigator:Q8VWK0 Uniprot:Q8VWK0
Length = 442
Score = 157 (60.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 63/264 (23%), Positives = 118/264 (44%)
Query: 159 EDEDPVQAEAFINRASLLQAETKDETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPI 218
E + P + E + A T +++Y++ R + ++IE + Y + P
Sbjct: 188 EKKKPKEGENMVEEAPA-DIPTLLVLKRIYYELMI-RYYSHNNEYIEICRSYKAIYDIPS 245
Query: 219 IDE--AERITALKSALICTILASAGQQ--RSRMLATLFKDERCQHLPAYSILEKMYLDRI 274
+ E + I L+ IC LA A +S +L +D++ +P + KM L +I
Sbjct: 246 VKENPEQWIPVLRK--ICWFLALAPHDPMQSSLLNATLEDKKLSEIPDF----KMLLKQI 299
Query: 275 IRKSELQDFAALLKPHQKAITVD----GSSILERA-------VTEHNLLSASKLYNNISF 323
+ +Q + +L ++ + G S+ ++A + EHN+L SK Y+ I+F
Sbjct: 300 VTMEVIQ-WTSLWNKYKDEFENEKNMIGGSLGDKAGEDLKLRIIEHNILVVSKYYSRITF 358
Query: 324 PELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFE----TREILPSWDKQIESL 379
L LL ++ +AEK S M+ + +D+ I+ F+ + EIL SW +E L
Sbjct: 359 KRLAELLCLTTEEAEKHLSEMVVSKALIAKIDRPSGIICFQIVKDSNEILNSWATNLEKL 418
Query: 380 CYRIDHIMEQIETVQPEWLSKKMA 403
+D + + + E + K+A
Sbjct: 419 ---LDLVEKSCHQIHKETMVHKVA 439
Score = 60 (26.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 90 TLDKVQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQT 149
TL+ V I E + A + + LA I E + +AA+++ + +ET + K+
Sbjct: 94 TLNNVAAGKIYVEIERARLTKMLAKIKEEQGLIAEAADLMQEVAVETFGAMAKTE-KIAF 152
Query: 150 YMKIARLYLEDEDPVQAEAFINRAS--LLQAETKDE 183
++ RL L+ +D V+A+ + + + A+T E
Sbjct: 153 ILEQVRLCLDQKDFVRAQILSRKINPRVFDADTTKE 188
>POMBASE|SPAC1420.03 [details] [associations]
symbol:rpn501 "19S proteasome regulatory subunit Rpn501"
species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
complex" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IC] [GO:0031144
"proteasome localization" evidence=IGI] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0043248 "proteasome assembly" evidence=IGI] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 PomBase:SPAPB8E5.02c PomBase:SPAC1420.03
GO:GO:0005829 GO:GO:0007346 GO:GO:0005635 EMBL:CU329670
GO:GO:0043161 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0043248 GO:GO:0034399
GO:GO:0031144 HOGENOM:HOG000194265 KO:K03035 EMBL:U97377 PIR:T37666
RefSeq:NP_593278.1 RefSeq:NP_594776.1 ProteinModelPortal:Q9UTM3
STRING:Q9UTM3 PRIDE:Q9UTM3 EnsemblFungi:SPAC1420.03.1
EnsemblFungi:SPAPB8E5.02c.1 GeneID:2542907 GeneID:2543347
KEGG:spo:SPAC1420.03 KEGG:spo:SPAPB8E5.02c OMA:CDEKIPL
OrthoDB:EOG41G6CN NextBio:20803946 Uniprot:Q9UTM3
Length = 443
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 68/344 (19%), Positives = 154/344 (44%)
Query: 65 RQILTDVSTHLVSQ-P--DEVAKPVSHF-TLDKVQPRVISFEEQVASIRQHLALIYEREE 120
+Q +T + H+++ P D++ ++ TL + I E + A + Q L+ I E +
Sbjct: 86 KQSMTSLVQHVMTYLPGIDDLKTKINLIETLRTITDGKIYVEVERARLTQLLSQIKEEQG 145
Query: 121 NWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAET 180
+ + A +L P+ET + + K+ + RL+L D A + + ++ E
Sbjct: 146 DIKSAQEILCNEPVET-YGSFDLKEKVAFILDQVRLFLLRSDYYMASTYTKKINVKFFEK 204
Query: 181 KD-ETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDE-AERITALKSALIC-TIL 237
+D ++L++ Y R+ + +++ + Y + ++ E E+ + ++C +L
Sbjct: 205 EDVQSLKLKYYEQKIRIGLHDDAYLDVCKYYRAVYDTAVVQEDPEKWKEILENVVCFALL 264
Query: 238 ASAGQQRSRMLATLFKDERCQHLPAYSILEKMYL-DRIIRKSELQD-FAALLKPHQKAIT 295
+++ +L + D + LP L K ++ + ++R ++ + + + L+ +
Sbjct: 265 TPYDNEQADLLHRINADHKLNSLPLLQQLVKCFIVNELMRWPKIAEIYGSALRSNPVFAE 324
Query: 296 VD--GS---SILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRM 350
D G S L + V EHN+ + Y+ I LG LL +S ++ E+ +I +
Sbjct: 325 NDEKGEKRWSELRKRVIEHNIRVVANYYSRIHCSRLGVLLDMSPSETEQFLCDLIAKHHF 384
Query: 351 NGYVDQIDSIVHFE----TREILPSWDKQIESLCYRIDHIMEQI 390
+D+ ++ F+ +E L W I L +++ + + I
Sbjct: 385 YAKIDRPAQVISFKKSQNVQEQLNEWGSNITELLGKLEKVRQLI 428
>POMBASE|SPAPB8E5.02c [details] [associations]
symbol:rpn502 "19S proteasome regulatory subunit
Rpn502" species:4896 "Schizosaccharomyces pombe" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0031144 "proteasome localization" evidence=IGI]
[GO:0034399 "nuclear periphery" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IGI] [GO:0043248 "proteasome assembly" evidence=IGI]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 PomBase:SPAPB8E5.02c
PomBase:SPAC1420.03 GO:GO:0005829 GO:GO:0007346 GO:GO:0005635
EMBL:CU329670 GO:GO:0043161 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 GO:GO:0043248
GO:GO:0034399 GO:GO:0031144 HOGENOM:HOG000194265 KO:K03035
EMBL:U97377 PIR:T37666 RefSeq:NP_593278.1 RefSeq:NP_594776.1
ProteinModelPortal:Q9UTM3 STRING:Q9UTM3 PRIDE:Q9UTM3
EnsemblFungi:SPAC1420.03.1 EnsemblFungi:SPAPB8E5.02c.1
GeneID:2542907 GeneID:2543347 KEGG:spo:SPAC1420.03
KEGG:spo:SPAPB8E5.02c OMA:CDEKIPL OrthoDB:EOG41G6CN
NextBio:20803946 Uniprot:Q9UTM3
Length = 443
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 68/344 (19%), Positives = 154/344 (44%)
Query: 65 RQILTDVSTHLVSQ-P--DEVAKPVSHF-TLDKVQPRVISFEEQVASIRQHLALIYEREE 120
+Q +T + H+++ P D++ ++ TL + I E + A + Q L+ I E +
Sbjct: 86 KQSMTSLVQHVMTYLPGIDDLKTKINLIETLRTITDGKIYVEVERARLTQLLSQIKEEQG 145
Query: 121 NWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAET 180
+ + A +L P+ET + + K+ + RL+L D A + + ++ E
Sbjct: 146 DIKSAQEILCNEPVET-YGSFDLKEKVAFILDQVRLFLLRSDYYMASTYTKKINVKFFEK 204
Query: 181 KD-ETLQVHYKVCYARVLDYRRKFIEAAQRYSELSYKPIIDE-AERITALKSALIC-TIL 237
+D ++L++ Y R+ + +++ + Y + ++ E E+ + ++C +L
Sbjct: 205 EDVQSLKLKYYEQKIRIGLHDDAYLDVCKYYRAVYDTAVVQEDPEKWKEILENVVCFALL 264
Query: 238 ASAGQQRSRMLATLFKDERCQHLPAYSILEKMYL-DRIIRKSELQD-FAALLKPHQKAIT 295
+++ +L + D + LP L K ++ + ++R ++ + + + L+ +
Sbjct: 265 TPYDNEQADLLHRINADHKLNSLPLLQQLVKCFIVNELMRWPKIAEIYGSALRSNPVFAE 324
Query: 296 VD--GS---SILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRM 350
D G S L + V EHN+ + Y+ I LG LL +S ++ E+ +I +
Sbjct: 325 NDEKGEKRWSELRKRVIEHNIRVVANYYSRIHCSRLGVLLDMSPSETEQFLCDLIAKHHF 384
Query: 351 NGYVDQIDSIVHFE----TREILPSWDKQIESLCYRIDHIMEQI 390
+D+ ++ F+ +E L W I L +++ + + I
Sbjct: 385 YAKIDRPAQVISFKKSQNVQEQLNEWGSNITELLGKLEKVRQLI 428
>FB|FBgn0028690 [details] [associations]
symbol:Rpn5 "Regulatory particle non-ATPase 5" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:AE014297 GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0004175 GO:GO:0008541 GeneTree:ENSGT00530000063471
eggNOG:COG5071 BRENDA:3.4.25.1 KO:K03035 OMA:WDALNEN EMBL:AF145315
EMBL:AY058339 RefSeq:NP_649588.1 UniGene:Dm.3426 SMR:Q9V3Z4
IntAct:Q9V3Z4 MINT:MINT-1656415 STRING:Q9V3Z4
EnsemblMetazoa:FBtr0078629 GeneID:40717 KEGG:dme:Dmel_CG1100
UCSC:CG1100-RA CTD:40717 FlyBase:FBgn0028690 InParanoid:Q9V3Z4
OrthoDB:EOG4HT77K GenomeRNAi:40717 NextBio:820233 Uniprot:Q9V3Z4
Length = 502
Score = 123 (48.4 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 47/211 (22%), Positives = 101/211 (47%)
Query: 198 DYRRKFIEAAQRYSELSYKPIIDEAERITA-LKSALICTILASAGQQRSRMLATLFKDER 256
D + K E A +E+ + ++ + +T L A++ +LA ++S M+A L K+++
Sbjct: 284 DDKDKKPEVATE-AEVEIELTEEQKKELTEKLVCAVLYCVLAPFDNEQSDMMAHLSKNKK 342
Query: 257 CQHLPAYSILEKMYLDR-IIRKSELQ-DFAALLKPHQ--KAITVDGSSI---LERAVTEH 309
+ +PAY + ++++ + +I DF +L ++ K T G L+ + EH
Sbjct: 343 LEEVPAYKEILRLFMSKELINFDTFNADFGLVLAENEMFKDSTKHGKKCITELKDRLIEH 402
Query: 310 NLLSASKLYNNISFPELGALLQISAAKAEKIASHMICEGRMNGYVDQIDSIVHFETR--- 366
N+ + Y+ + + LL + ++ E+ S + + +D+ I++F +
Sbjct: 403 NIRIIAMYYSRLHLARMSELLNLPTSRCEEYLSKLANTDTIRVKIDRPAGIIYFTQKKSA 462
Query: 367 -EILPSW--D-KQIESLCYRIDHIMEQIETV 393
+IL +W D Q+ SL + H++ + E V
Sbjct: 463 SDILNNWATDVNQLMSLVNKTCHLINKEECV 493
Score = 74 (31.1 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 43/187 (22%), Positives = 80/187 (42%)
Query: 43 CTECLNLFVEAIVNENVSLVISRQ---------ILTDVSTHLVSQPDEVAKPVSHFTLDK 93
C C + +NE VSL++ R+ ++ + T++ PD+ K TL
Sbjct: 71 CQICFDASNWNALNEYVSLLVRRRSQLKQAVVKMIQECVTYVDKTPDKETKLKLIDTLRS 130
Query: 94 VQPRVISFEEQVASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQTYMKI 153
V I E + A + + LA I E + + AA V+ + +ET + K++ ++
Sbjct: 131 VTEGKIYVEIERARLTKILADIKEADGDVAGAATVMEELQVETYGSMDKRE-KVELILEQ 189
Query: 154 ARLYLEDEDPVQAEAFINRASLLQAETKDETLQVHYKV-CYARVLDYRR--KFIEAAQRY 210
RL L ED V + + S+ + D+ Q K+ Y ++ R F+ ++ Y
Sbjct: 190 MRLCLLKEDYVSTQIIAKKISI---KFFDDPAQHDLKLKFYYLMIQLNRDTSFLNTSRHY 246
Query: 211 SELSYKP 217
++ P
Sbjct: 247 QAIAEPP 253
>ASPGD|ASPL0000076235 [details] [associations]
symbol:AN4775 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0043248
"proteasome assembly" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031144 "proteasome localization" evidence=IEA] [GO:0010388
"cullin deneddylation" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=IEA] [GO:0034399
"nuclear periphery" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:BN001303 EMBL:AACD01000081
eggNOG:COG5071 HOGENOM:HOG000194265 KO:K03035 OrthoDB:EOG41G6CN
RefSeq:XP_662379.1 ProteinModelPortal:Q5B3V5 STRING:Q5B3V5
EnsemblFungi:CADANIAT00005647 GeneID:2872576 KEGG:ani:AN4775.2
OMA:ILANHDY Uniprot:Q5B3V5
Length = 487
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 84/413 (20%), Positives = 170/413 (41%)
Query: 2 DISTLKTQLAALSSQAGSHKDQADKY-RSILELILKNQDTTTCTECLNLFVEAIVNENVS 60
D + L Q+ LS + G K + ++++ + + + T + + + +
Sbjct: 69 DWNLLNDQVLLLSKKHGQLKQAISRMVQTVMSFLDETPNMETKLSVIQT-LRTVTEGKIF 127
Query: 61 LVISRQILTDVSTHLV-SQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYERE 119
+ + R +T + + + SQ D A L ++ E+ I + +AL ER
Sbjct: 128 VEVERARVTRILSQIKKSQGDLNAAADILCELQVETFGSMTRREKTEFILEQVALCIERG 187
Query: 120 ENWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQAEAFINRASLLQAE 179
+ W A + I K+Y ++ +I +L E E+ + A + +
Sbjct: 188 D-WTQATVLSRKI-----NKRYFARKPKKSAEEIEKLKKEAEEREKTRAPDEAPMEVDDD 241
Query: 180 TKDETLQVHYKVCYARVLDYRRKFIEAAQRYSE-LSYKPIIDEAERITALKSALICTILA 238
D L+ + + DY K+++ + Y E L + + E++ A+ + ++ I+
Sbjct: 242 VTDLKLRYYEQQIILANHDY--KYLDVCKHYREVLDTDSVQENPEQLRAVLARIVYYIVL 299
Query: 239 SA-GQQRSRMLATLFKDERCQHLPAYSILEKMY-LDRIIRKSEL-QDFAALL-------- 287
S ++S +L + +D R +P S L K++ + ++R + + F L
Sbjct: 300 SPYDNEQSDLLHRIQQDTRLSAVPVESRLVKLFTVPELMRWPIVAEQFGPHLCNTDVFSP 359
Query: 288 KPHQKAITVDGS--SILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMI 345
KP Q A L + V EHN+ +K Y I L LL ++ + EK S ++
Sbjct: 360 KPSQSAEDRPYRRWQDLRKRVIEHNVRVVAKYYTRIEMGRLTQLLDLTEEETEKYISELV 419
Query: 346 CEGRMNGYVDQIDSIVHF----ETREILPSWDKQIESLC---YRIDHIMEQIE 391
+ +D+ +V+F + ++L W + SL RIDH++ + E
Sbjct: 420 TSKTIYAKIDRPARLVNFAKPRDADDVLNEWSSDMRSLLGLLERIDHLITKEE 472
>UNIPROTKB|G5EHP6 [details] [associations]
symbol:MGCH7_ch7g327 "26S proteasome regulatory subunit
RPN5" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 EMBL:CM000230
EMBL:CM001237 KO:K03035 RefSeq:XP_003721188.1
ProteinModelPortal:G5EHP6 EnsemblFungi:MGG_02608T0 GeneID:2682348
KEGG:mgr:MGG_02608 Uniprot:G5EHP6
Length = 507
Score = 104 (41.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 32/120 (26%), Positives = 58/120 (48%)
Query: 286 LLKPHQKAITVDGSSILERAVTEHNLLSASKLYNNISFPELGALLQISAAKAEKIASHMI 345
++KPH++ D L + V EHN+ ++ Y I L LL ++ + EK S ++
Sbjct: 377 VVKPHKR--WED----LRKRVIEHNVRVIARYYTRIRMDRLTELLDLAEEETEKYISDLV 430
Query: 346 CEGRMNGYVDQIDSIVHF----ETREILPSWDKQIESLC---YRIDHIM---EQIETVQP 395
+ +D+ IV+F + ++L W ++SL RIDH++ E + +QP
Sbjct: 431 TSKTVYAKIDRPARIVNFAKPRDADDVLNEWSSNMKSLLGLLERIDHLITKEEMMANIQP 490
Score = 60 (26.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 41/167 (24%), Positives = 71/167 (42%)
Query: 2 DISTLKTQLAALSSQAGSHKDQADKYRSILELILKNQDTTTCTECLNLFVEAIVNENVSL 61
DI +L+ L QA D A R ++ ++ +D + LN V + ++ L
Sbjct: 30 DIQGAIEKLSVLEKQARQASDLATTSRVLVAIVTICKDEGDWS-LLNDQVLVLSKKHSQL 88
Query: 62 --VISRQILTDVSTHLVSQPDEVAKPVSHFTLDKVQPRVISFEEQVASIRQHLALIYERE 119
I++ + T V T L S P+ K TL V I E + A + + L+ I + +
Sbjct: 89 KQAITKMVQT-VVTFLDSTPNLETKLSVIETLRTVTEGKIFVEVERARVTKILSDIKKEQ 147
Query: 120 ENWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLYLEDEDPVQA 166
+ + A ++L + +ET + K Q + L +E D QA
Sbjct: 148 GDLKAATDILCELQVETFGSMERRE-KTQFLLDQVALCIESGDWTQA 193
>ASPGD|ASPL0000014128 [details] [associations]
symbol:AN10519 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BN001302 Gene3D:1.25.40.10 GO:GO:0000502
InterPro:IPR013143 SMART:SM00753 HOGENOM:HOG000210093 OMA:SGILDQG
EnsemblFungi:CADANIAT00004435 Uniprot:C8V4A5
Length = 424
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 64/312 (20%), Positives = 136/312 (43%)
Query: 100 SFEEQVASIRQHLALIYEREENWRDAANVLVGIPLETGQKQYSVDYKLQTYMKIARLY-- 157
SF Q ++ L I+ +++++ DA N++ + E + + ++ + +R+Y
Sbjct: 124 SFLRQ--NLETRLVAIFMQKQSYYDALNLINSLLRELKRLDDKL-MLVEVQLLESRVYHA 180
Query: 158 LEDEDPVQAEAFINRASLLQAETKDET---LQVHYKVCYARVLDYRRK---FIEAAQRYS 211
L ++ +A R S T L + + +A D+ FIEA + YS
Sbjct: 181 LGNQAKARAALTAARTSAASVYTPPNLQAGLDMQSGMLHAEDKDFNTSYSYFIEALEGYS 240
Query: 212 ELSYKPIIDEAERITA-LKSALICTILASAGQQRSRMLATLFKDERCQ-HLPAYSILEKM 269
L DE E+ TA L+ L+C I+ + + +L + + L A + +
Sbjct: 241 SL------DEGEKATAALQYMLLCKIMLNLVDDVTTLLGSKQAQKYASPRLEAMKAVARA 294
Query: 270 YLDRIIRKSE--LQDFAALLKPHQKAITVDGSSILERAVTEHNLLSASKLYNNISFPELG 327
+ +R + + E L D+ L A + L A+ E NL+ + ++ + +
Sbjct: 295 HANRSLEEYEKALSDYRFELG--SDAFIRNHLRRLYDAMLEQNLIKVIEPFSRVELDHIA 352
Query: 328 ALLQISAAKAEKIASHMICEGRMNGYVDQ-IDSIVHFETREILPSWDKQIESLCYRIDHI 386
++ + + E+ S MI + + G +DQ ++ ++ E ++D +E++ R+ ++
Sbjct: 353 KMVGLDTQQVERKLSQMILDKVIIGVLDQGAGCLIVYDETERDQAYDAALETIA-RLSNV 411
Query: 387 MEQIETVQPEWL 398
+E + T Q L
Sbjct: 412 VESLYTNQASQL 423
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 408 408 0.00079 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 609 (65 KB)
Total size of DFA: 244 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 36.02u 0.09s 36.11t Elapsed: 00:00:30
Total cpu time: 36.03u 0.09s 36.12t Elapsed: 00:00:32
Start: Thu Aug 15 14:19:49 2013 End: Thu Aug 15 14:20:21 2013