Query psy7322
Match_columns 221
No_of_seqs 108 out of 417
Neff 5.6
Searched_HMMs 46136
Date Fri Aug 16 23:50:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7322.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7322hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0440|consensus 100.0 5.4E-83 1.2E-87 549.8 20.5 205 13-219 37-242 (243)
2 KOG1903|consensus 100.0 4.6E-81 1E-85 517.2 16.3 210 8-217 7-217 (217)
3 PF03637 Mob1_phocein: Mob1/ph 100.0 8.8E-78 1.9E-82 505.5 19.1 175 33-209 1-175 (175)
4 KOG1852|consensus 100.0 3.2E-36 6.9E-41 249.8 8.2 182 19-208 26-210 (223)
5 PRK09672 phage exclusion prote 45.9 35 0.00077 31.6 4.6 37 44-84 97-133 (305)
6 PF04417 DUF501: Protein of un 27.1 2.5E+02 0.0054 22.9 6.3 75 136-210 16-91 (139)
7 cd00397 DNA_BRE_C DNA breaking 26.0 2.2E+02 0.0048 21.3 5.7 32 130-161 84-115 (164)
8 KOG2321|consensus 24.4 69 0.0015 32.5 3.0 60 49-113 12-78 (703)
9 COG4687 Uncharacterized protei 23.0 1E+02 0.0023 24.7 3.2 33 122-161 89-121 (122)
10 PF15192 TMEM213: TMEM213 fami 21.1 57 0.0012 24.3 1.3 20 46-65 33-52 (82)
11 KOG3261|consensus 20.6 75 0.0016 27.3 2.1 18 155-172 121-139 (202)
No 1
>KOG0440|consensus
Probab=100.00 E-value=5.4e-83 Score=549.77 Aligned_cols=205 Identities=64% Similarity=1.091 Sum_probs=199.0
Q ss_pred CCCCCCCCCCCCCCCcccchHHHHHHHcCC-CchhhhhcCCCCCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCCCCc
Q psy7322 13 SSKTFKPKKNIPEGTHQYDLMKHAAATLGS-GNLRLAVMLPDGEDLNEWVAVNTVDFFNQINMLYGTITEFCTEESCPIM 91 (221)
Q Consensus 13 ~~~t~~p~~~~~~~~~~~~l~~~~~~~l~~-~~l~~~V~lP~g~d~neWla~~~~~f~~~in~l~~~l~e~CT~~tCP~M 91 (221)
..+++++++..+++++++++.+++++++++ |||+++|+||+|+|.|||||+|++||||+||+|||+|+|+||+++||.|
T Consensus 37 ~~~~~~~k~~~~~~s~~~~~~~~~e~~l~s~g~l~~aV~LP~G~D~nEWlA~nt~~fF~qvN~lYGtitEfCT~~sCp~M 116 (243)
T KOG0440|consen 37 AAKPFRKKEASASLSVRPQAKYLAEATLGSSGNLREAVKLPEGEDLNEWLAVNTLDFFNQVNLLYGTITEFCTQQSCPHM 116 (243)
T ss_pred ccccccccccCcccCccHHHHHHHHHhhcccccHHHHhcCCCCCchhhHHHHhHHHHHHHHHHHHHHHHHHcCcccCccc
Confidence 457788888889999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEecCCCCCCCcccChHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhh
Q psy7322 92 SAGPKYEYHWADGHTVKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFLLIAKTILKRLFRVYAHIYHQHF 171 (221)
Q Consensus 92 sAg~~~~YlW~d~~~~~kp~~~~A~~Yi~~~~~w~~~~l~de~iFPt~~g~~fP~~F~~~v~~I~rrLfRVyAHiY~~H~ 171 (221)
+||++++|+|+|+. +||++||||||||++|+|||++++||.|||||+|.+||++|...||+|+|||||||||||++||
T Consensus 117 sag~~yeY~W~D~~--~kp~~~sApqYId~lmtw~q~~~dde~iFPtK~g~~FP~nF~~~vk~Ilr~lFrvyAHiY~~Hf 194 (243)
T KOG0440|consen 117 SAGPNYEYLWADEK--GKPVRVSAPQYIDYLMTWCQNQLDDENIFPTKYGNPFPGNFESVVKKILRRLFRVYAHIYHSHF 194 (243)
T ss_pred cCCCcceeeeeccc--CCccccCchHHHHHHHHHHHHhccccccCccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999964 5999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHhcCCCcccccchHHHHHHHhccC
Q psy7322 172 SEVVQLGEEAHLNTSFKHFIFFVQEFNLIERRELAPLQELIEKLTAKD 219 (221)
Q Consensus 172 ~~~~~l~~e~hlNt~FkHF~~F~~ef~Li~~kel~pl~~li~~l~~~~ 219 (221)
+.|++|++++|||++|+||+.|++||+|||+||++||++||+.|...+
T Consensus 195 ~~i~~L~l~ahlNt~F~Hf~~f~~eF~LiD~kE~aPl~~Li~~l~~~d 242 (243)
T KOG0440|consen 195 DEIVALQLEAHLNTSFKHFILFAREFQLLDKKETAPLLELIESLLSQD 242 (243)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHhccCHHhhhhHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999998754
No 2
>KOG1903|consensus
Probab=100.00 E-value=4.6e-81 Score=517.23 Aligned_cols=210 Identities=54% Similarity=1.049 Sum_probs=205.7
Q ss_pred cccCCCCCCCCCCCCCCCCCcccchHHHHHHHcCCC-chhhhhcCCCCCCchhHHHHHHHHHHhhhhhhHhhhcccCCCC
Q psy7322 8 FSGSRSSKTFKPKKNIPEGTHQYDLMKHAAATLGSG-NLRLAVMLPDGEDLNEWVAVNTVDFFNQINMLYGTITEFCTEE 86 (221)
Q Consensus 8 ~~~~~~~~t~~p~~~~~~~~~~~~l~~~~~~~l~~~-~l~~~V~lP~g~d~neWla~~~~~f~~~in~l~~~l~e~CT~~ 86 (221)
....++++||||+|++++|+.+|+||+.++++|.+| ||+.+|+||+|+|.|+|+|+|++||||.||++||+++|+||++
T Consensus 7 ~q~fnK~KTFRPkkkF~~GT~Rf~LhK~AqAsL~sG~dLr~aV~LPpgEn~nDW~AVHvVDFFNRiNLiYGTise~Cte~ 86 (217)
T KOG1903|consen 7 KQVFNKDKTFRPKKKFEPGTQRFELHKKAQASLNSGLDLRSAVRLPPGENLNDWLAVHVVDFFNRINLIYGTISEFCTET 86 (217)
T ss_pred HHHHccCCccCCCCCCCCCceeeehHHHHHHHHhcCcchHHhccCCCCCCccceeeeehhhhhhhhHhhhhhHhhhcccc
Confidence 344578999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCceEEEecCCCCCCCcccChHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q psy7322 87 SCPIMSAGPKYEYHWADGHTVKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFLLIAKTILKRLFRVYAHI 166 (221)
Q Consensus 87 tCP~MsAg~~~~YlW~d~~~~~kp~~~~A~~Yi~~~~~w~~~~l~de~iFPt~~g~~fP~~F~~~v~~I~rrLfRVyAHi 166 (221)
|||+|++|++++|+|+|+..|+||+.+|||+||+++||||+.+||||.+||+..|+|||+||.++|++|+.||||||.|+
T Consensus 87 sCP~MsGG~rYEY~WqD~~~ykkPt~L~Ap~Ym~lLMDWIE~~INnE~vFPt~~~vpFPKnF~qi~~KILtRLFRVFVHV 166 (217)
T KOG1903|consen 87 SCPVMSGGPRYEYRWQDERKYKKPTALSAPRYMALLMDWIEVQINNEEVFPTSVGVPFPKNFLQICKKILTRLFRVFVHV 166 (217)
T ss_pred CCCcccCCCcceeEecccccccCCccCCcHHHHHHHHHHHHHhccccccccccCCCCCcHhHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHhchhhHHHHHHHHHHHHHHHhcCCCcccccchHHHHHHHhc
Q psy7322 167 YHQHFSEVVQLGEEAHLNTSFKHFIFFVQEFNLIERRELAPLQELIEKLTA 217 (221)
Q Consensus 167 Y~~H~~~~~~l~~e~hlNt~FkHF~~F~~ef~Li~~kel~pl~~li~~l~~ 217 (221)
|.|||+.+..+|+|+|+|||||||++|++||+|||.|||+||+++.++|+.
T Consensus 167 YIHHFDri~~mGaE~HvNtcYKHFYyFv~Ef~li~~kELEpLkeMT~R~c~ 217 (217)
T KOG1903|consen 167 YIHHFDRILSMGAEAHVNTCYKHFYYFVTEFGLIDTKELEPLKEMTERICH 217 (217)
T ss_pred hhhhhHHHHHhccHHHHHHHHHHHHHHhhhccccchhhcchHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999873
No 3
>PF03637 Mob1_phocein: Mob1/phocein family; InterPro: IPR005301 Mob1 is an essential Saccharomyces cerevisiae (Baker's yeast) protein, identified from a two-hybrid screen, that binds Mps1p, a protein kinase essential for spindle pole body duplication and mitotic checkpoint regulation. Mob1 contains no known structural motifs; however MOB1 is a member of a conserved gene family and shares sequence similarity with a nonessential yeast gene, MOB2. Mob1 is a phosphoprotein in vivo and a substrate for the Mps1p kinase in vitro. Conditional alleles of MOB1 cause a late nuclear division arrest at restrictive temperature []. This family also includes phocein Q9QYW3 from SWISSPROT, a rat protein that by yeast two hybrid interacts with striatin [].; PDB: 2HJN_A 1PI1_A 1R3B_A.
Probab=100.00 E-value=8.8e-78 Score=505.50 Aligned_cols=175 Identities=64% Similarity=1.171 Sum_probs=159.0
Q ss_pred HHHHHHHcCCCchhhhhcCCCCCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCCCCcCCCCCceEEEecCCCCCCCcc
Q psy7322 33 MKHAAATLGSGNLRLAVMLPDGEDLNEWVAVNTVDFFNQINMLYGTITEFCTEESCPIMSAGPKYEYHWADGHTVKKPIK 112 (221)
Q Consensus 33 ~~~~~~~l~~~~l~~~V~lP~g~d~neWla~~~~~f~~~in~l~~~l~e~CT~~tCP~MsAg~~~~YlW~d~~~~~kp~~ 112 (221)
|++++++|++|||+++|+||+|+|+|||||+|++||||+||++||+++|+||++|||+|+||++|+|+|+|+. ++|++
T Consensus 1 ~~~~~~~l~~~~l~~~V~lP~g~d~~eWla~~~~~f~~~in~l~~~v~e~Ct~~tCP~Msag~~~~Ylw~d~~--~kp~~ 78 (175)
T PF03637_consen 1 QQYVQATLGKGNLRTLVKLPKGVDENEWLAVHTVDFFNEINLLYGVVSEFCTPETCPTMSAGPNWEYLWADHK--KKPVK 78 (175)
T ss_dssp HHHHHHHCCGG-HHHHCS-STT--HHHHHHHHHHHHHHHHHHHHHHHGGGS-TTTTSSEESSTTCEE-BSSST--TS-BS
T ss_pred CHHHHHHHhcCCHHHHhcCcCCCChhhHHHHhhHHHHHHHHHHHhhccCcCCcccCcCccCCccceeeeeccC--CCCcc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999964 58999
Q ss_pred cChHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhhHHHHHhchhhHHHHHHHHHHH
Q psy7322 113 CSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFLLIAKTILKRLFRVYAHIYHQHFSEVVQLGEEAHLNTSFKHFIF 192 (221)
Q Consensus 113 ~~A~~Yi~~~~~w~~~~l~de~iFPt~~g~~fP~~F~~~v~~I~rrLfRVyAHiY~~H~~~~~~l~~e~hlNt~FkHF~~ 192 (221)
|||||||+++|+|++++|+|+++|||+.|++||++|.++|++|||||||||||||++||+.|.++|+++|||++|+||++
T Consensus 79 ~~A~~Yi~~~l~w~~~~l~d~~iFPt~~~~~fp~~f~~~v~~I~rrLfRvyaHiY~~H~~~~~~l~~~~hln~~F~hF~~ 158 (175)
T PF03637_consen 79 CSAPQYIDHLLDWIQSQLNDEKIFPTKPGVPFPKNFKKTVKKIFRRLFRVYAHIYHHHFEQFVELELEAHLNTCFKHFVL 158 (175)
T ss_dssp --HHHHHHHHHHHHHHHHTSTTTSSSSTTS-TTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTT-HHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHccCcccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcccccchH
Q psy7322 193 FVQEFNLIERRELAPLQ 209 (221)
Q Consensus 193 F~~ef~Li~~kel~pl~ 209 (221)
|++||+||+++|++||+
T Consensus 159 f~~eF~Li~~~el~pL~ 175 (175)
T PF03637_consen 159 FAREFDLIDEKELEPLQ 175 (175)
T ss_dssp HHHHHT-S-GGGGGGGH
T ss_pred HHHHhCCCCHHHhcccC
Confidence 99999999999999996
No 4
>KOG1852|consensus
Probab=100.00 E-value=3.2e-36 Score=249.75 Aligned_cols=182 Identities=21% Similarity=0.426 Sum_probs=170.3
Q ss_pred CCCCCCCCCcccchHHHHHHHcCCC--chhhhhcCCCCCCchhHHHHHHHHHHhhhhhhHhhhcccCCCCCCCCcCCCCC
Q psy7322 19 PKKNIPEGTHQYDLMKHAAATLGSG--NLRLAVMLPDGEDLNEWVAVNTVDFFNQINMLYGTITEFCTEESCPIMSAGPK 96 (221)
Q Consensus 19 p~~~~~~~~~~~~l~~~~~~~l~~~--~l~~~V~lP~g~d~neWla~~~~~f~~~in~l~~~l~e~CT~~tCP~MsAg~~ 96 (221)
|..+++++++...+++|++++|+++ |+..+..+|+|.|++.|-++|+++|+-++|.|.-.++..|.++||..|+|++.
T Consensus 26 pde~feemdstlavqqyiqq~ikadpsnv~~iltppe~qdegvwkyehlrqfc~elnglav~lq~ec~p~tctqmtateq 105 (223)
T KOG1852|consen 26 PDESFEEMDSTLAVQQYIQQNIKADPSNVDKILTPPEGQDEGVWKYEHLRQFCLELNGLAVKLQSECHPDTCTQMTATEQ 105 (223)
T ss_pred CcchHHHHHhHHHHHHHHHHHhccCchhHHHhcCCCcccccchhhHHHHHHHHHHhhhHHHHHhcccCchHhhhhhhHhH
Confidence 5667888999999999999999997 99999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCCCCCCcccChHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy7322 97 YEYHWADGHTVKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGVPFPKNFLLIAKTILKRLFRVYAHIYHQHFSEVVQ 176 (221)
Q Consensus 97 ~~YlW~d~~~~~kp~~~~A~~Yi~~~~~w~~~~l~de~iFPt~~g~~fP~~F~~~v~~I~rrLfRVyAHiY~~H~~~~~~ 176 (221)
|.|+|+. ||.|.+|||++|..|++|.+..+||+.+.|||+.. +-+.....+..++||.||||+|+|+||+..|..
T Consensus 106 wiflcaa---hktpkecpaidytrhtldgaacllnsnkyfpsrvs--ikessv~klgsvcrrvyrifsha~fhhr~ifde 180 (223)
T KOG1852|consen 106 WIFLCAA---HKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVS--IKESSVAKLGSVCRRVYRIFSHAYFHHRKIFDE 180 (223)
T ss_pred HHhhhhh---cCCcccCCcccchhhccccccccccCCccCCcccc--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999986 57899999999999999999999999999999876 568899999999999999999999999999999
Q ss_pred hchhhHHHHHHHHHHHHHHHhcCCCcccc-cch
Q psy7322 177 LGEEAHLNTSFKHFIFFVQEFNLIERREL-APL 208 (221)
Q Consensus 177 l~~e~hlNt~FkHF~~F~~ef~Li~~kel-~pl 208 (221)
.+.|+||...|.| |+..|+|++.+.| .|+
T Consensus 181 fe~etylc~rft~---~v~kynlms~e~livpi 210 (223)
T KOG1852|consen 181 FENETYLCHRFTK---FVSKYNLMSKENLIVPI 210 (223)
T ss_pred hhhhhHHHHHHHH---HHHhhhhccccceeeec
Confidence 9999999988666 6789999999886 454
No 5
>PRK09672 phage exclusion protein Lit; Provisional
Probab=45.91 E-value=35 Score=31.57 Aligned_cols=37 Identities=16% Similarity=0.274 Sum_probs=26.7
Q ss_pred chhhhhcCCCCCCchhHHHHHHHHHHhhhhhhHhhhcccCC
Q psy7322 44 NLRLAVMLPDGEDLNEWVAVNTVDFFNQINMLYGTITEFCT 84 (221)
Q Consensus 44 ~l~~~V~lP~g~d~neWla~~~~~f~~~in~l~~~l~e~CT 84 (221)
||+.++.++++-|.++|+...+ +.+.-+....++.||
T Consensus 97 dle~~~~~~~s~~~~~~l~~~a----e~~~s~~~~~~~~~~ 133 (305)
T PRK09672 97 DLETINGLDKSRDLSEYLLNRA----ETLESIIEELSSVHT 133 (305)
T ss_pred chhhhccccchHHhHHHHHHHH----HHHHhHHHhhhcccc
Confidence 8899999999999999998543 233333445566665
No 6
>PF04417 DUF501: Protein of unknown function (DUF501); InterPro: IPR007511 This is a family of uncharacterised bacterial proteins.
Probab=27.10 E-value=2.5e+02 Score=22.86 Aligned_cols=75 Identities=23% Similarity=0.224 Sum_probs=54.6
Q ss_pred CC-CCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhhhHHHHHhchhhHHHHHHHHHHHHHHHhcCCCcccccchHH
Q psy7322 136 FP-SKIGVPFPKNFLLIAKTILKRLFRVYAHIYHQHFSEVVQLGEEAHLNTSFKHFIFFVQEFNLIERRELAPLQE 210 (221)
Q Consensus 136 FP-t~~g~~fP~~F~~~v~~I~rrLfRVyAHiY~~H~~~~~~l~~e~hlNt~FkHF~~F~~ef~Li~~kel~pl~~ 210 (221)
.| ...|.|||-.|--++..+-+..-|+=++=...-.+....-+.+-.--..-.|--+-+.+-.|+++++.+-++.
T Consensus 16 ~P~l~~g~PFPTlfwLtcP~L~~~isrLE~~G~i~~l~~~l~~d~~l~~~~~~aH~~y~~~R~~ll~~~~~~~~~~ 91 (139)
T PF04417_consen 16 APRLVDGKPFPTLFWLTCPYLVKAISRLEAEGGIAELEERLAEDEELAEAYRRAHRRYAALRWSLLSEEEREFLER 91 (139)
T ss_pred ccCCCCCccCCccHhhcCHHHHHHHHHHHhcCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHh
Confidence 46 6678999999999999999999999888777777666655444111222357778899999998887654443
No 7
>cd00397 DNA_BRE_C DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine recombinases that share the same fold in their catalytic domain containing six conserved active site residues. The best-studied members of this diverse superfamily include human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl gener
Probab=26.04 E-value=2.2e+02 Score=21.34 Aligned_cols=32 Identities=38% Similarity=0.333 Sum_probs=21.5
Q ss_pred hCCCCCCCCCCCCCCCcchHHHHHHHHHHHHH
Q psy7322 130 LDDETLFPSKIGVPFPKNFLLIAKTILKRLFR 161 (221)
Q Consensus 130 l~de~iFPt~~g~~fP~~F~~~v~~I~rrLfR 161 (221)
..++.+|++..|.+........+..+++++..
T Consensus 84 ~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (164)
T cd00397 84 GDEEYLFPSRRGGPAATLSRRNVKRIFKAAGR 115 (164)
T ss_pred CCCCceeecCCCCCccCCcHHHHHHHHHHHHH
Confidence 46788999988766554555666666666554
No 8
>KOG2321|consensus
Probab=24.38 E-value=69 Score=32.47 Aligned_cols=60 Identities=22% Similarity=0.403 Sum_probs=42.2
Q ss_pred hcCCCCCCchhHHHHHHHH-------HHhhhhhhHhhhcccCCCCCCCCcCCCCCceEEEecCCCCCCCccc
Q psy7322 49 VMLPDGEDLNEWVAVNTVD-------FFNQINMLYGTITEFCTEESCPIMSAGPKYEYHWADGHTVKKPIKC 113 (221)
Q Consensus 49 V~lP~g~d~neWla~~~~~-------f~~~in~l~~~l~e~CT~~tCP~MsAg~~~~YlW~d~~~~~kp~~~ 113 (221)
..+-.|-..-+||+--... .++.|. .|+++=-++.|-.|+.++.-+|+|+-+. ||+.++|
T Consensus 12 YnvS~~kslP~Wls~r~kR~lkkd~~~~~rie----LiQdfe~p~ast~ik~s~DGqY~lAtG~-YKP~ikv 78 (703)
T KOG2321|consen 12 YNVSAGKSLPDWLSDRRKRQLKKDVDYRQRIE----LIQDFEMPTASTRIKVSPDGQYLLATGT-YKPQIKV 78 (703)
T ss_pred EEeecCCCchhhhhhHHHHHHhhchHHHHHHH----HHHhcCCccccceeEecCCCcEEEEecc-cCCceEE
Confidence 3444777888999965533 334443 4577777788889998888899999764 7666654
No 9
>COG4687 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.96 E-value=1e+02 Score=24.71 Aligned_cols=33 Identities=21% Similarity=0.399 Sum_probs=28.6
Q ss_pred HHHHHHHhhCCCCCCCCCCCCCCCcchHHHHHHHHHHHHH
Q psy7322 122 LMTWVQDQLDDETLFPSKIGVPFPKNFLLIAKTILKRLFR 161 (221)
Q Consensus 122 ~~~w~~~~l~de~iFPt~~g~~fP~~F~~~v~~I~rrLfR 161 (221)
++.|+...++++++--+ +.|.+++++-||++|+
T Consensus 89 iLk~ir~yvg~~~vV~s-------psl~d~~kr~fk~~f~ 121 (122)
T COG4687 89 ILKKIREYVGNEKVVKS-------PSLLDTFKRAFKSLFK 121 (122)
T ss_pred HHHHHHHHhCccceecc-------hHHHHHHHHHHHHHhc
Confidence 78999999999988644 7899999999999885
No 10
>PF15192 TMEM213: TMEM213 family
Probab=21.14 E-value=57 Score=24.32 Aligned_cols=20 Identities=25% Similarity=0.348 Sum_probs=17.2
Q ss_pred hhhhcCCCCCCchhHHHHHH
Q psy7322 46 RLAVMLPDGEDLNEWVAVNT 65 (221)
Q Consensus 46 ~~~V~lP~g~d~neWla~~~ 65 (221)
..+.=++.|||+.-|||.-+
T Consensus 33 ~Aa~CC~~gvDeyGWIAAAV 52 (82)
T PF15192_consen 33 QAARCCHAGVDEYGWIAAAV 52 (82)
T ss_pred HHHHHhccCCchhhHHHHHH
Confidence 56677899999999999876
No 11
>KOG3261|consensus
Probab=20.58 E-value=75 Score=27.32 Aligned_cols=18 Identities=44% Similarity=0.859 Sum_probs=13.2
Q ss_pred HHHHHHHHH-HHHhhhhhH
Q psy7322 155 ILKRLFRVY-AHIYHQHFS 172 (221)
Q Consensus 155 I~rrLfRVy-AHiY~~H~~ 172 (221)
=|||-|||. |-.|+.||.
T Consensus 121 ~frRkFRVI~a~~y~k~fa 139 (202)
T KOG3261|consen 121 EFRRKFRVIHAPLYFKHFA 139 (202)
T ss_pred HHHhheeeeccHHHHHHhh
Confidence 589999984 566766663
Done!