RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy733
         (97 letters)



>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella
          typhimurium [TaxId: 90371]}
          Length = 257

 Score = 24.6 bits (53), Expect = 2.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 25 TAISFVALGTSVPDTFASKVSAIQD 49
           A+  V+ GTS  DT    + A + 
Sbjct: 2  KALLVVSFGTSYHDTCEKNIVACER 26


>d1of8a_ c.1.10.4 (A:) 3-deoxy-D-arabino-heptulosonate-7-phosphate
           synthase (DAHP synthase, AroG) {Baker's yeast
           (Saccharomyces cerevisiae), tyrosine-regulated isozyme
           [TaxId: 4932]}
          Length = 346

 Score = 24.4 bits (53), Expect = 3.2
 Identities = 15/83 (18%), Positives = 22/83 (26%), Gaps = 12/83 (14%)

Query: 10  LASHFGCSVGLKDAVTAISFVALGTSVPDTFASKVSAIQDSTADNSVGNVTGSNAVNVFL 69
           LAS     VG K+       VA            V A Q +   +    VT      +  
Sbjct: 168 LASGLSFPVGFKNGTDGTLNVA------------VDACQAAAHSHHFMGVTKHGVAAITT 215

Query: 70  GLGIAWSLAAIYHSLNGSYFYVD 92
             G       +     G+ +   
Sbjct: 216 TKGNEHCFVILRGGKKGTNYDAK 238


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0442    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 327,817
Number of extensions: 11041
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 4
Length of query: 97
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 38
Effective length of database: 1,597,526
Effective search space: 60705988
Effective search space used: 60705988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.6 bits)