RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7332
         (71 letters)



>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase
          2C, catalytic domain {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 295

 Score = 58.8 bits (141), Expect = 8e-13
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 10/67 (14%)

Query: 2  GAYLSQPITKKESTNHEGSNLTCGASSMQGWRIYQEGAAVPCSVLFSNFIVILSPPGLLL 61
          GA+L +P  +K +   +G+ L  G SSMQGWR+  E A             ++  P  L 
Sbjct: 1  GAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDA----------HTAVIGLPSGLE 50

Query: 62 FLKYWGM 68
             ++ +
Sbjct: 51 SWSFFAV 57


>d1yvra1 a.118.25.1 (A:5-363) 60-kda SS-aARo ribonucleoprotein
          {African clawed frog (Xenopus laevis) [TaxId: 8355]}
          Length = 359

 Score = 24.1 bits (52), Expect = 1.5
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 6  SQPITKKESTNHEG 19
          +QP+ +K+  N EG
Sbjct: 4  TQPLNEKQVPNSEG 17


>d1uadc_ b.1.18.18 (C:) Exocyst complex component Sec5,
          Ral-binding domain {Mouse (Mus musculus) [TaxId:
          10090]}
          Length = 92

 Score = 23.5 bits (50), Expect = 2.1
 Identities = 8/40 (20%), Positives = 14/40 (35%)

Query: 19 GSNLTCGASSMQGWRIYQEGAAVPCSVLFSNFIVILSPPG 58
          G NL  G + + G  I      +    + ++ IV      
Sbjct: 25 GENLGTGPTDLIGLTICGHNCLLTAEWMSASKIVCRVGQA 64


>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 270

 Score = 23.2 bits (50), Expect = 3.3
 Identities = 6/14 (42%), Positives = 8/14 (57%)

Query: 54  LSPPGLLLFLKYWG 67
           LS  G L ++ YW 
Sbjct: 177 LSDLGRLSYMAYWK 190


>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
           MYST1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 271

 Score = 23.2 bits (50), Expect = 3.7
 Identities = 6/14 (42%), Positives = 7/14 (50%)

Query: 54  LSPPGLLLFLKYWG 67
           LS  G L +  YW 
Sbjct: 177 LSDLGKLSYRSYWS 190


>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 273

 Score = 23.2 bits (50), Expect = 4.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)

Query: 54  LSPPGLLLFLKYWG 67
           LS  GLL +  YW 
Sbjct: 180 LSDLGLLSYRAYWS 193


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.137    0.454 

Gapped
Lambda     K      H
   0.267   0.0621    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 257,010
Number of extensions: 8473
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 8
Length of query: 71
Length of database: 2,407,596
Length adjustment: 39
Effective length of query: 32
Effective length of database: 1,872,126
Effective search space: 59908032
Effective search space used: 59908032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 47 (22.1 bits)