BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7337
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P59015|VPS18_DANRE Vacuolar protein sorting-associated protein 18 homolog OS=Danio
rerio GN=vps18 PE=2 SV=2
Length = 974
Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 103/177 (58%), Gaps = 10/177 (5%)
Query: 1 VSERNDIKTALEFLDESDLISIEDILPFFSDFTCMDQFKHAICASLEQYNQHIVDLKEDM 60
V E D+K A+ L +L+ IEDILPFF DF +D FK AIC+SLE+YN+HI +LK++M
Sbjct: 764 VQEEKDVKKAMNCLSSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEM 823
Query: 61 SEATRSAEQVRNDIQACANRYHMIQNCDTCLLCEVQLVSNTFYIFPCGHTFHSHCIVQDL 120
EAT SA+++R DIQ N+Y ++++ + C C+ L++ FY+F CGH FH C++Q++
Sbjct: 824 EEATESAKRIREDIQEMRNKYGVVESQEKCATCDFPLLNRPFYLFLCGHMFHYDCLLQEV 883
Query: 121 DPE----QKAKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
P ++ KLD + A H +E G G G+ E+ K
Sbjct: 884 IPHLSVYKQNKLDELQKKLAATTQTTK------ARHKPREEDTVSLGKGQGSREQIK 934
>sp|Q9P253|VPS18_HUMAN Vacuolar protein sorting-associated protein 18 homolog OS=Homo
sapiens GN=VPS18 PE=1 SV=2
Length = 973
Score = 127 bits (319), Expect = 7e-29, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Query: 1 VSERNDIKTALEFLDESDLISIEDILPFFSDFTCMDQFKHAICASLEQYNQHIVDLKEDM 60
V E D++TA+ L L+ IED+LPFF DF +D FK AIC+SL+ YN HI +L+ +M
Sbjct: 764 VQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREM 823
Query: 61 SEATRSAEQVRNDIQACANRYHMIQNCDTCLLCEVQLVSNTFYIFPCGHTFHSHCIVQDL 120
EAT SA+++R D+Q RY ++ D C C+ L++ FY+F CGH FH+ C++Q +
Sbjct: 824 EEATASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAV 883
Query: 121 DPEQKAKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTKVN-DERV 179
P A ++ E + L P KE++ G + E+ K + DE V
Sbjct: 884 RPGLPA---YKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELV 940
>sp|Q8R307|VPS18_MOUSE Vacuolar protein sorting-associated protein 18 homolog OS=Mus
musculus GN=Vps18 PE=1 SV=2
Length = 973
Score = 126 bits (316), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/122 (45%), Positives = 80/122 (65%)
Query: 1 VSERNDIKTALEFLDESDLISIEDILPFFSDFTCMDQFKHAICASLEQYNQHIVDLKEDM 60
V E D++TA+ L L+ IED+LPFF DF +D FK AIC+SL+ YN HI +L+ +M
Sbjct: 764 VQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREM 823
Query: 61 SEATRSAEQVRNDIQACANRYHMIQNCDTCLLCEVQLVSNTFYIFPCGHTFHSHCIVQDL 120
EAT SA+++R D+Q RY ++ D C C+ L++ FY+F CGH FH+ C++Q +
Sbjct: 824 EEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHADCLLQAV 883
Query: 121 DP 122
P
Sbjct: 884 RP 885
>sp|Q24314|VPS18_DROME Vacuolar protein sorting-associated protein 18 homolog
OS=Drosophila melanogaster GN=dor PE=1 SV=3
Length = 1002
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 76/118 (64%)
Query: 5 NDIKTALEFLDESDLISIEDILPFFSDFTCMDQFKHAICASLEQYNQHIVDLKEDMSEAT 64
ND+K AL L E DL+ IED+LPFF+DF +D FK AIC +L YNQ I +L+ +M+E T
Sbjct: 800 NDVKKALNLLKECDLLRIEDLLPFFADFEKIDNFKEAICDALRDYNQRIQELQREMAETT 859
Query: 65 RSAEQVRNDIQACANRYHMIQNCDTCLLCEVQLVSNTFYIFPCGHTFHSHCIVQDLDP 122
++V ++Q +++ DTC +CE+ L+ F+IF CGH FHS C+ + + P
Sbjct: 860 EQTDRVTAELQQLRQHSLTVESQDTCEICEMMLLVKPFFIFICGHKFHSDCLEKHVVP 917
>sp|P27801|PEP3_YEAST Vacuolar membrane protein PEP3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PEP3 PE=1 SV=1
Length = 918
Score = 67.8 bits (164), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 7 IKTALEFLDESDLISIEDILPFFSDFTCMDQFKHAICASLEQYNQHIVDLKEDMSEATRS 66
I+T L D +++++I+D+LPFF+++T + K + LE +N + ++ ED+ +
Sbjct: 745 IRTILN--DSNEILTIKDLLPFFNEYTTIANLKEELIKFLENHNMKMNEISEDIINSKNL 802
Query: 67 AEQVRNDIQACANRYHMIQNCDTCLLCEVQLVSNTFYIFPCGHTFHSHCIVQ 118
++ +I Y +++ +C C L F +FPCGH FH +CI++
Sbjct: 803 KVEINTEISKFNEIYRILEPGKSCDECGKFLQIKKFIVFPCGHCFHWNCIIR 854
>sp|O74925|PEP3_SCHPO Vacuolar membrane protein pep3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pep3 PE=3 SV=1
Length = 900
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 2 SERNDIKTALEFLDESDLISIEDILPFFSDFTCMDQFKHAICASLEQYNQHIVDLKEDMS 61
S+++ IK L FL+ S+++ + +++ + +D +C L+ + I L ++
Sbjct: 749 SKKSGIKETLRFLENSEVLQLPELIRLLPEDIKLDDLSDNVCDELDHCMKRIEQLDFEIG 808
Query: 62 EATRSAEQVRNDIQACANRYHMIQNCDTCLLCEVQLVSNTFYIFPCGHTFHSHCIVQDLD 121
+A+ A +++ + + NRY +++ ++C C L S F +FPC H FH C++
Sbjct: 809 QASEVAHEIQTNAENMRNRYIVLEPNESCWHCNQPLFSEPFVLFPCQHAFHRSCML---- 864
Query: 122 PEQKAKLDSEETGSEAVNNYLSRECPYCG 150
E+ KL SE+ + +EC CG
Sbjct: 865 -EKTYKLASEKN--------ILKECQLCG 884
>sp|Q2QL82|CTTB2_MICMU Cortactin-binding protein 2 OS=Microcebus murinus GN=CTTNBP2 PE=3
SV=1
Length = 1647
Score = 36.6 bits (83), Expect = 0.15, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEEAMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q2QLF8|CTTB2_CALJA Cortactin-binding protein 2 OS=Callithrix jacchus GN=CTTNBP2 PE=3
SV=1
Length = 1662
Score = 35.8 bits (81), Expect = 0.26, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 145 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGRVIEEAQKLEDIMAKLEEEKKK 204
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 205 TNELEEELSAEKRRSSEMEAQME-KQLSEFDTEREQLRAKLNR 246
>sp|Q8WZ74|CTTB2_HUMAN Cortactin-binding protein 2 OS=Homo sapiens GN=CTTNBP2 PE=1 SV=1
Length = 1663
Score = 35.8 bits (81), Expect = 0.27, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDVMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q2IBF7|CTTB2_GORGO Cortactin-binding protein 2 OS=Gorilla gorilla gorilla GN=CTTNBP2
PE=3 SV=1
Length = 1663
Score = 35.8 bits (81), Expect = 0.28, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDVMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q2IBE6|CTTB2_PONAB Cortactin-binding protein 2 OS=Pongo abelii GN=CTTNBP2 PE=3 SV=2
Length = 1663
Score = 35.4 bits (80), Expect = 0.30, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDVMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSTEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q09YK4|CTTB2_ATEGE Cortactin-binding protein 2 OS=Ateles geoffroyi GN=CTTNBP2 PE=3
SV=1
Length = 1660
Score = 35.4 bits (80), Expect = 0.31, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDVMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q09YG9|CTTB2_SAIBB Cortactin-binding protein 2 OS=Saimiri boliviensis boliviensis
GN=CTTNBP2 PE=3 SV=1
Length = 1659
Score = 35.4 bits (80), Expect = 0.31, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDVMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKQRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q2IBA2|CTTB2_CHLAE Cortactin-binding protein 2 OS=Chlorocebus aethiops GN=CTTNBP2 PE=3
SV=1
Length = 1662
Score = 35.4 bits (80), Expect = 0.32, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDVMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|A0M8S4|CTTB2_PAPAN Cortactin-binding protein 2 OS=Papio anubis GN=CTTNBP2 PE=3 SV=1
Length = 1663
Score = 35.4 bits (80), Expect = 0.37, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDIMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q07DY4|CTTB2_COLGU Cortactin-binding protein 2 OS=Colobus guereza GN=CTTNBP2 PE=3 SV=1
Length = 1663
Score = 35.4 bits (80), Expect = 0.37, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDIMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q07DX4|CTTB2_NOMLE Cortactin-binding protein 2 OS=Nomascus leucogenys GN=CTTNBP2 PE=3
SV=1
Length = 1663
Score = 35.0 bits (79), Expect = 0.40, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEDIMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSTEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|Q2IBF8|CTTB2_EULMM Cortactin-binding protein 2 OS=Eulemur macaco macaco GN=CTTNBP2
PE=3 SV=1
Length = 1653
Score = 35.0 bits (79), Expect = 0.41, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 117 VQDLDPEQK---AKLDSEETGSEAVNNYLSRECPYCGSHMIEKESKKEGGDGGGTEEKTK 173
+Q L+ E K A+L+ E ++ V L +EC +IE+ K E EEK K
Sbjct: 146 LQALEQEHKKLAARLEEERGKNKQVVLMLVKECKQLSGKVIEEAQKLEEVMAKLEEEKKK 205
Query: 174 VNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKRKR 216
N+ E + E E +ME K++ E + +++ + K R
Sbjct: 206 TNELEEELSAEKRRSTEMEAQME-KQLSEFDTEREQLRAKLNR 247
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201
Score = 33.9 bits (76), Expect = 1.0, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 155 EKESKKEGGDGGGTEEKTKVNDERVEKKPKALEKEEREVKMEGKEMKEEEEDKDVVEKKR 214
E++ K+E E+ + + EK+ + E+ ER+ ++E K+ +++E +K E+ R
Sbjct: 600 EQKKKREAERKAQEAERLR---KEAEKQKRLREERERQAEIERKQREQKELEKKRREEAR 656
Query: 215 KRYLRVSGGKDKDSR 229
+ LR KD+ R
Sbjct: 657 QNELREKKTKDERER 671
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,951,147
Number of Sequences: 539616
Number of extensions: 4008149
Number of successful extensions: 45451
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 876
Number of HSP's that attempted gapping in prelim test: 31671
Number of HSP's gapped (non-prelim): 8936
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)