BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7339
(223 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99MT2|MSH4_MOUSE MutS protein homolog 4 OS=Mus musculus GN=Msh4 PE=2 SV=1
Length = 958
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 61/82 (74%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y+KQ+AL QIMAQ+G YVPA A FR+A I+TRI +D IE N+STF EMKE
Sbjct: 705 MSGKSTYLKQIALCQIMAQIGSYVPAEYASFRIAAQIFTRISTDDDIETNSSTFMKEMKE 764
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
IA+I+ +SLIL+DEL R
Sbjct: 765 IAYILHNANDKSLILIDELGRG 786
>sp|O15457|MSH4_HUMAN MutS protein homolog 4 OS=Homo sapiens GN=MSH4 PE=1 SV=2
Length = 936
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 61/82 (74%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y+KQ+AL QIMAQ+G YVPA + FR+A I+TRI +D IE N+STF EMKE
Sbjct: 683 MSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAKQIFTRISTDDDIETNSSTFMKEMKE 742
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
IA+I+ +SLIL+DEL R
Sbjct: 743 IAYILHNANDKSLILIDELGRG 764
>sp|F4JP48|MSH4_ARATH DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana GN=MSH4
PE=2 SV=1
Length = 792
Score = 100 bits (249), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 63/82 (76%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++QV L+ I+AQ+GCYVPA A R+ D I+TR+G D++E N+STF EM+E
Sbjct: 556 MSGKSTYLQQVCLVVILAQIGCYVPARFATIRVVDRIFTRMGTMDNLESNSSTFMTEMRE 615
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A I+Q +T RSLI++DEL RA
Sbjct: 616 TAFIMQNVTNRSLIVMDELGRA 637
>sp|Q6CSR1|MSH3_KLULA DNA mismatch repair protein MSH3 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=MSH3 PE=3 SV=1
Length = 1029
Score = 97.4 bits (241), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/82 (54%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS YI+QVALL IM Q+GCY+PA AE + D I+TRIG +D + STF +EM E
Sbjct: 805 MGGKSSYIRQVALLVIMTQIGCYIPADSAEMSICDRIFTRIGSHDDLLNAKSTFQVEMSE 864
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+ HI+ TPRSL+L+DE+ R
Sbjct: 865 VLHILNSSTPRSLLLLDEVGRG 886
>sp|Q24X61|MUTS_DESHY DNA mismatch repair protein MutS OS=Desulfitobacterium hafniense
(strain Y51) GN=mutS PE=3 SV=1
Length = 862
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 63/82 (76%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QVAL+ +MAQ+G +VPA A +ADHI+TR+G +D + STF +EM E
Sbjct: 616 MAGKSTYMRQVALIVLMAQIGSFVPAQQATIPIADHIFTRVGASDDLASGQSTFMVEMYE 675
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+AHI++ +TP+SLI++DE+ R
Sbjct: 676 VAHILRHVTPQSLIILDEVGRG 697
>sp|Q759V4|MSH3_ASHGO DNA mismatch repair protein MSH3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MSH3
PE=3 SV=1
Length = 1032
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 59/82 (71%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS YI+QVALL IMAQ+GCYVPA AEF + D I+TRIG D++ N STF +EM E
Sbjct: 799 MGGKSSYIRQVALLVIMAQIGCYVPAQEAEFSIFDQIFTRIGAYDNLLRNDSTFKIEMTE 858
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+ I++ T SL+L+DE+ R
Sbjct: 859 MVQILRSSTENSLLLLDEVGRG 880
>sp|Q97I19|MUTS_CLOAB DNA mismatch repair protein MutS OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=mutS PE=3 SV=1
Length = 869
Score = 94.7 bits (234), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 60/82 (73%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QV L+ +MAQ+GC+VPAS AE + D I+TRIG +D + STF +EM E
Sbjct: 617 MAGKSTYMRQVGLIVLMAQIGCFVPASAAEISICDKIFTRIGASDDLNAGKSTFMVEMWE 676
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
++HI++ T SLIL+DE+ R
Sbjct: 677 VSHILKNATKNSLILLDEVGRG 698
>sp|A4XL47|MUTS_CALS8 DNA mismatch repair protein MutS OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=mutS
PE=3 SV=1
Length = 863
Score = 94.4 bits (233), Expect = 6e-19, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 61/82 (74%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QVAL+ IMAQ+GC+VPA A+ + D I++RIG +D I STF +EM E
Sbjct: 610 MAGKSTYMRQVALIVIMAQMGCFVPAEEAQIGIVDKIFSRIGASDDISSGQSTFMVEMSE 669
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A+I++ TP+SLI+ DE+ R
Sbjct: 670 VANILKNATPKSLIIFDEVGRG 691
>sp|B9MJU0|MUTS_CALBD DNA mismatch repair protein MutS OS=Caldicellulosiruptor bescii
(strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN=mutS PE=3
SV=1
Length = 863
Score = 93.2 bits (230), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 60/82 (73%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QVAL+ IMAQ+GC+VPA A + D I++RIG +D I STF +EM E
Sbjct: 610 MAGKSTYMRQVALIVIMAQMGCFVPADEAHIGVVDKIFSRIGASDDISSGQSTFMVEMSE 669
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A+I++ TP+SLI+ DE+ R
Sbjct: 670 VANILKNATPKSLIIFDEVGRG 691
>sp|Q8RA71|MUTS_THETN DNA mismatch repair protein MutS OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=mutS PE=3 SV=1
Length = 869
Score = 92.8 bits (229), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/82 (51%), Positives = 60/82 (73%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QVAL+ +MAQVGC+VPAS A + D I+TR+G +D I STF +EM E
Sbjct: 622 MAGKSTYMRQVALIVLMAQVGCFVPASYARIGIVDKIFTRVGASDDIFAGQSTFMVEMSE 681
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A+I+ T +SLI++DE+ R
Sbjct: 682 VANILHSATSKSLIILDEVGRG 703
>sp|B2KB17|MUTS_ELUMP DNA mismatch repair protein MutS OS=Elusimicrobium minutum (strain
Pei191) GN=mutS PE=3 SV=1
Length = 851
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKSVY+KQ A+L I+AQ+G +VPA+ A + D I TRIG D+I STF +EMKE
Sbjct: 611 MGGKSVYLKQAAVLVILAQMGSFVPAASAHVGIVDKIMTRIGAQDAIAMGQSTFMVEMKE 670
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+HI+ TP+SLIL+DE+ R
Sbjct: 671 TSHILASCTPKSLILLDEVGRG 692
>sp|Q7NLT8|MUTS_GLOVI DNA mismatch repair protein MutS OS=Gloeobacter violaceus (strain
PCC 7421) GN=mutS PE=3 SV=1
Length = 890
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 59/82 (71%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS +I+QVAL+Q++AQVG +VPA A +AD I+TR+G D + STF +EM E
Sbjct: 688 MSGKSSFIRQVALIQLLAQVGAFVPARGAVLGVADRIFTRVGAVDDLATGQSTFMVEMTE 747
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ TPRSL+L+DE+ R
Sbjct: 748 TANILNHATPRSLVLLDEIGRG 769
>sp|Q9HSL6|MUTS2_HALSA DNA mismatch repair protein MutS 2 OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=mutS2 PE=3
SV=1
Length = 863
Score = 91.3 bits (225), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 60/82 (73%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++QVA++ ++AQ GC+VPA+ AE R+ D ++TR+G +D I STF +EM E
Sbjct: 629 MSGKSTYMRQVAVIVVLAQAGCFVPAAAAELRVVDRVFTRVGASDDIAGGRSTFMVEMTE 688
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A I++ T SL+L+DE+ R
Sbjct: 689 LASILRAATDESLVLLDEVGRG 710
>sp|B0R2T7|MUTS2_HALS3 DNA mismatch repair protein MutS 2 OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=mutS2 PE=3 SV=1
Length = 863
Score = 91.3 bits (225), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 60/82 (73%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++QVA++ ++AQ GC+VPA+ AE R+ D ++TR+G +D I STF +EM E
Sbjct: 629 MSGKSTYMRQVAVIVVLAQAGCFVPAAAAELRVVDRVFTRVGASDDIAGGRSTFMVEMTE 688
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A I++ T SL+L+DE+ R
Sbjct: 689 LASILRAATDESLVLLDEVGRG 710
>sp|O65607|MSH3_ARATH DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3
PE=1 SV=2
Length = 1081
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 60/82 (73%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS YI+QVAL+ IMAQVG +VPAS A+ + D ++TR+G +DSI+ STF E+ E
Sbjct: 820 MGGKSCYIRQVALISIMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSE 879
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+HII+ + RSL+++DEL R
Sbjct: 880 ASHIIRTCSSRSLVILDELGRG 901
>sp|Q46CE2|MUTS_METBF DNA mismatch repair protein MutS OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=mutS PE=3 SV=1
Length = 900
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++Q AL+ IMAQVG +VPAS A + D ++TRIG D + STF +EM E
Sbjct: 640 MAGKSTYMRQTALIAIMAQVGSFVPASYASIGIIDQVFTRIGAFDDLASGQSTFMVEMVE 699
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A+I+ +PRSL+L+DE+ R
Sbjct: 700 LANILNNASPRSLVLLDEIGRG 721
>sp|B3E6P2|MUTS_GEOLS DNA mismatch repair protein MutS OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=mutS PE=3 SV=1
Length = 872
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 60/82 (73%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QVAL+ +MAQVG +VPAS A +AD I+TR+G D++ STF +EM E
Sbjct: 626 MAGKSTYMRQVALITLMAQVGSFVPASRATIGIADQIFTRVGAGDNLARGQSTFMVEMME 685
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
AHI++ T +SL+++DE+ R
Sbjct: 686 TAHILRSATTKSLVVLDEIGRG 707
>sp|Q7MXR7|MUTS_PORGI DNA mismatch repair protein MutS OS=Porphyromonas gingivalis
(strain ATCC BAA-308 / W83) GN=mutS PE=3 SV=1
Length = 891
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS ++Q AL+ +MAQ+G +VPA A + D I+TR+G +D+I STF +EM+E
Sbjct: 620 MSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMGESTFMVEMQE 679
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
++I+ LTPRSL+L DEL R
Sbjct: 680 ASNILNNLTPRSLVLFDELGRG 701
>sp|B9LB04|MUTS_CHLSY DNA mismatch repair protein MutS OS=Chloroflexus aurantiacus
(strain ATCC 29364 / DSM 637 / Y-400-fl) GN=mutS PE=3
SV=1
Length = 966
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS +++QVAL+ +MAQ+G +VPA AE L D I+TRIG D I STF +EM E
Sbjct: 712 MAGKSTFLRQVALITLMAQIGSFVPADEAEIGLVDRIFTRIGAQDDIATGQSTFMVEMTE 771
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A ++ TPRSLI++DE+ R
Sbjct: 772 TAALLMQSTPRSLIILDEVGRG 793
>sp|A9WFZ9|MUTS_CHLAA DNA mismatch repair protein MutS OS=Chloroflexus aurantiacus
(strain ATCC 29366 / DSM 635 / J-10-fl) GN=mutS PE=3
SV=1
Length = 966
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS +++QVAL+ +MAQ+G +VPA AE L D I+TRIG D I STF +EM E
Sbjct: 712 MAGKSTFLRQVALITLMAQIGSFVPADEAEIGLVDRIFTRIGAQDDIATGQSTFMVEMTE 771
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A ++ TPRSLI++DE+ R
Sbjct: 772 TAALLMQSTPRSLIILDEVGRG 793
>sp|C0ZEZ4|MUTS_BREBN DNA mismatch repair protein MutS OS=Brevibacillus brevis (strain 47
/ JCM 6285 / NBRC 100599) GN=mutS PE=3 SV=1
Length = 862
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++Q+AL+ +MAQ+GC+VPA A+ + D I+TRIG D + STF +EM E
Sbjct: 607 MAGKSTYMRQIALITVMAQIGCFVPAKQAKLSIVDQIFTRIGAADDLVGGHSTFMVEMLE 666
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
H +Q T +SLIL+DE+ R
Sbjct: 667 TRHALQKATAKSLILLDEIGRG 688
>sp|Q8KCC0|MUTS_CHLTE DNA mismatch repair protein MutS OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=mutS PE=3 SV=1
Length = 878
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QV L+ ++AQVGC+VPA AE L D I+TR+G +D++ STF +EM E
Sbjct: 633 MAGKSSYLRQVGLVVLLAQVGCFVPAESAEIGLVDRIFTRVGASDNLTSGESTFLVEMNE 692
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A I+ T RSL+L+DE+ R
Sbjct: 693 AASILNNATERSLLLLDEIGRG 714
>sp|A1AMW9|MUTS_PELPD DNA mismatch repair protein MutS OS=Pelobacter propionicus (strain
DSM 2379) GN=mutS PE=3 SV=1
Length = 870
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QVAL+ +MAQ G +VPA+ A +AD I+TR+G D++ STF LEM E
Sbjct: 624 MAGKSTYMRQVALITLMAQAGSFVPAASARIGIADRIFTRVGAGDNLSRGQSTFMLEMME 683
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A I++ TP+SLI++DE+ R
Sbjct: 684 AAGILRNATPKSLIVMDEIGRG 705
>sp|B1KPS7|MUTS_SHEWM DNA mismatch repair protein MutS OS=Shewanella woodyi (strain ATCC
51908 / MS32) GN=mutS PE=3 SV=1
Length = 858
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++QVAL+ +MA +GCYVPA A D I+TRIG D + STF +EM E
Sbjct: 621 MGGKSTYMRQVALITLMAHIGCYVPAQSATIGPVDRIFTRIGAADDLASGRSTFMVEMTE 680
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ TP+SL+L+DE+ R
Sbjct: 681 TANILHNATPKSLVLMDEIGRG 702
>sp|B2J434|MUTS_NOSP7 DNA mismatch repair protein MutS OS=Nostoc punctiforme (strain ATCC
29133 / PCC 73102) GN=mutS PE=3 SV=1
Length = 892
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 57/81 (70%)
Query: 2 SGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEI 61
SGKS Y++QV L+Q+MAQ+G +VPA LA+ + D I+TR+G D + STF +EM E
Sbjct: 700 SGKSCYLRQVGLIQLMAQIGSFVPARLAKLGICDRIFTRVGAVDDLATGQSTFMVEMNET 759
Query: 62 AHIIQFLTPRSLILVDELCRA 82
A+I+ T RSL+L+DE+ R
Sbjct: 760 ANILNHATSRSLVLLDEIGRG 780
>sp|Q8TTB4|MUTS_METAC DNA mismatch repair protein MutS OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=mutS
PE=3 SV=1
Length = 900
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++Q AL+ IMAQVG +VPAS A + D ++TRIG D + STF +EM E
Sbjct: 640 MAGKSTYMRQTALIAIMAQVGSFVPASYASVGIIDQVFTRIGAFDDLASGQSTFMVEMVE 699
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A+I+ +P+SL+L+DE+ R
Sbjct: 700 LANILNNASPKSLVLLDEIGRG 721
>sp|A8H1T4|MUTS_SHEPA DNA mismatch repair protein MutS OS=Shewanella pealeana (strain
ATCC 700345 / ANG-SQ1) GN=mutS PE=3 SV=1
Length = 859
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++QVAL+ +MA +GCYVPA A D I+TRIG +D + STF +EM E
Sbjct: 621 MGGKSTYMRQVALITLMAHIGCYVPAEQAVIGPVDRIFTRIGASDDLASGRSTFMVEMTE 680
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ TP SL+L+DE+ R
Sbjct: 681 TANILHNATPNSLVLMDEIGRG 702
>sp|Q2JT35|MUTS_SYNJA DNA mismatch repair protein MutS OS=Synechococcus sp. (strain
JA-3-3Ab) GN=mutS PE=3 SV=1
Length = 882
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++Q+ L+QI+AQ+G +VPA AE L D ++TRIG D + STF +EM E
Sbjct: 644 MSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIGAVDDLATGQSTFMVEMNE 703
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ RSL+L+DE+ R
Sbjct: 704 TANILNHAGERSLVLLDEIGRG 725
>sp|Q82ZA2|MUTS_ENTFA DNA mismatch repair protein MutS OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=mutS PE=3 SV=1
Length = 858
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++Q+AL +MAQ+GC+VPA AE + D I+TRIG +D + STF +EM E
Sbjct: 612 MSGKSTYMRQLALTVVMAQIGCFVPAESAEMPIFDQIFTRIGASDDLIAGQSTFMVEMME 671
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
++ TP SLIL DEL R
Sbjct: 672 ANQALRHATPNSLILFDELGRG 693
>sp|B1HRG8|MUTS_LYSSC DNA mismatch repair protein MutS OS=Lysinibacillus sphaericus
(strain C3-41) GN=mutS PE=3 SV=1
Length = 856
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++QVAL+ +MAQ+GCYVPA A+ + D I+TRIG D + STF +EM E
Sbjct: 608 MSGKSTYMRQVALIVVMAQMGCYVPAEKAKLPITDQIFTRIGAADDLAAGQSTFMVEMLE 667
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
H I T SL+L DE+ R
Sbjct: 668 SQHAIMHATKNSLMLFDEIGRG 689
>sp|A8MFD4|MUTS_ALKOO DNA mismatch repair protein MutS OS=Alkaliphilus oremlandii (strain
OhILAs) GN=mutS PE=3 SV=2
Length = 880
Score = 88.2 bits (217), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/82 (47%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QVAL+ +MAQ+G +VPA+ A + D I+TR+G ND + STF +EM E
Sbjct: 628 MAGKSTYMRQVALIILMAQIGSFVPATSATIGITDRIFTRVGANDDLSQGQSTFMVEMSE 687
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A I+ T +SL++VDE+ R
Sbjct: 688 MATIVNLATKKSLLIVDEIGRG 709
>sp|Q2JIA6|MUTS_SYNJB DNA mismatch repair protein MutS OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=mutS PE=3 SV=1
Length = 884
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++Q+ L+QI+AQ+G +VPA AE L D ++TRIG D + STF +EM E
Sbjct: 654 MSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIGAVDDLATGQSTFMVEMNE 713
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ RSL+L+DE+ R
Sbjct: 714 TANILNHAGERSLVLLDEIGRG 735
>sp|A6R7S1|MSH3_AJECN DNA mismatch repair protein MSH3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=MSH3 PE=3 SV=2
Length = 1166
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++QVAL+ IM Q+G YVPA A + D +YTR+G D++ STF +E+ E
Sbjct: 938 MGGKSSYVRQVALISIMGQIGSYVPADSATLGMLDAVYTRMGAFDNMLAGESTFMVELSE 997
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A I++ TPRSL+++DEL R
Sbjct: 998 TADILKQATPRSLVILDELGRG 1019
>sp|A6RPB6|MSH3_BOTFB DNA mismatch repair protein msh3 OS=Botryotinia fuckeliana (strain
B05.10) GN=msh3 PE=3 SV=2
Length = 1133
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 56/82 (68%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++QVAL+ I+AQ+G YVPA A L D IYTR+G DS+ STF +E+ E
Sbjct: 896 MGGKSSYVRQVALISILAQIGSYVPAESARLGLLDGIYTRMGAYDSLFTAQSTFMVELSE 955
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A I++ PRSL+++DEL R
Sbjct: 956 TASILKSAGPRSLVILDELGRG 977
>sp|Q895H2|MUTS_CLOTE DNA mismatch repair protein MutS OS=Clostridium tetani (strain
Massachusetts / E88) GN=mutS PE=3 SV=1
Length = 881
Score = 87.8 bits (216), Expect = 5e-17, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 59/82 (71%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QVAL+ IMAQ+G +VPA A L D I+TRIG +D + STF +EM E
Sbjct: 615 MAGKSTYMRQVALITIMAQIGSFVPAKEASISLCDKIFTRIGASDDLSAGKSTFMVEMWE 674
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+++I++ T +SLI++DE+ R
Sbjct: 675 VSNILKNATSKSLIILDEVGRG 696
>sp|A6LLR1|MUTS_THEM4 DNA mismatch repair protein MutS OS=Thermosipho melanesiensis
(strain BI429 / DSM 12029) GN=mutS PE=3 SV=1
Length = 819
Score = 87.8 bits (216), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS YI+QV L+ +MAQ+G +VPA AE + D ++TR+G D I STF +EM E
Sbjct: 599 MSGKSTYIRQVGLIAVMAQIGSFVPADDAEIPIFDRVFTRMGARDDISTGKSTFLIEMSE 658
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A I++ T +SL+L+DE+ R
Sbjct: 659 VALILEKATKKSLVLLDEVGRG 680
>sp|B0TK13|MUTS_SHEHH DNA mismatch repair protein MutS OS=Shewanella halifaxensis (strain
HAW-EB4) GN=mutS PE=3 SV=1
Length = 859
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++QVAL+ +MA +GCYVPA A D I+TRIG +D + STF +EM E
Sbjct: 621 MGGKSTYMRQVALITLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTE 680
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ TP SL+L+DE+ R
Sbjct: 681 TANILHNATPNSLVLMDEIGRG 702
>sp|Q4WGB7|MSH3_ASPFU DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=msh3
PE=3 SV=1
Length = 1123
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 64/102 (62%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++Q+AL+ IMAQ+G YVPA A+ + D ++TR+G D++ STF +E+ E
Sbjct: 897 MGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDAVFTRMGAFDNMLAGESTFMVELSE 956
Query: 61 IAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYART 102
A I++ TPRSL+++DEL R + LD+ RT
Sbjct: 957 TADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRT 998
>sp|B0YCF6|MSH3_ASPFC DNA mismatch repair protein msh3 OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=msh3 PE=3 SV=1
Length = 1123
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 64/102 (62%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++Q+AL+ IMAQ+G YVPA A+ + D ++TR+G D++ STF +E+ E
Sbjct: 897 MGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDAVFTRMGAFDNMLAGESTFMVELSE 956
Query: 61 IAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYART 102
A I++ TPRSL+++DEL R + LD+ RT
Sbjct: 957 TADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRT 998
>sp|A1DCB2|MSH3_NEOFI DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=msh3
PE=3 SV=1
Length = 1117
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 64/102 (62%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++Q+AL+ IMAQ+G YVPA A+ + D ++TR+G D++ STF +E+ E
Sbjct: 891 MGGKSSYVRQIALIAIMAQIGSYVPARSAKLGMLDAVFTRMGAFDNMLAGESTFMVELSE 950
Query: 61 IAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYART 102
A I++ TPRSL+++DEL R + LD+ RT
Sbjct: 951 TADILKQATPRSLVILDELGRGTSTHDGVAIAQAVLDYMVRT 992
>sp|Q5FLX5|MUTS_LACAC DNA mismatch repair protein MutS OS=Lactobacillus acidophilus
(strain ATCC 700396 / NCK56 / N2 / NCFM) GN=mutS PE=3
SV=1
Length = 856
Score = 87.4 bits (215), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++Q+AL+ IMAQVG +VPA A+ + D I+TRIG D + STF +EM E
Sbjct: 603 MSGKSTYMRQMALIAIMAQVGSFVPADSADLPIFDQIFTRIGAADDLISGQSTFMVEMSE 662
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+Q+ T RSL+L DE+ R
Sbjct: 663 ANDALQYATKRSLVLFDEIGRG 684
>sp|Q3B0S2|MUTS_SYNS9 DNA mismatch repair protein MutS OS=Synechococcus sp. (strain
CC9902) GN=mutS PE=3 SV=1
Length = 905
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%)
Query: 2 SGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEI 61
SGKS Y++Q+ L+Q++AQVG +VPA A+ +AD I+TR+G D + STF +EM E
Sbjct: 725 SGKSCYLRQIGLIQLLAQVGSWVPAKEAKIGIADRIFTRVGAVDDLAAGQSTFMVEMAET 784
Query: 62 AHIIQFLTPRSLILVDELCRA 82
A+I+ T RSL+L+DE+ R
Sbjct: 785 ANILHHATSRSLVLLDEIGRG 805
>sp|B5FAC8|MUTS_VIBFM DNA mismatch repair protein MutS OS=Vibrio fischeri (strain MJ11)
GN=mutS PE=3 SV=1
Length = 854
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++Q AL+ +MA VGCYVPA AE D I+TRIG +D + STF +EM E
Sbjct: 618 MGGKSTYMRQTALIALMAHVGCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTE 677
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ T SL+L+DE+ R
Sbjct: 678 TANILHNATKHSLVLMDEIGRG 699
>sp|B3EP11|MUTS_CHLPB DNA mismatch repair protein MutS OS=Chlorobium phaeobacteroides
(strain BS1) GN=mutS PE=3 SV=1
Length = 878
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++Q L+ ++AQVGC+VPA AE L D I+TR+G +D++ STF +EM E
Sbjct: 633 MAGKSSYLRQNGLIVLLAQVGCFVPADAAEIGLVDRIFTRVGASDNLTSGESTFLVEMNE 692
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ T +SLIL+DE+ R
Sbjct: 693 AANILNNATGKSLILLDEIGRG 714
>sp|B8CJQ5|MUTS_SHEPW DNA mismatch repair protein MutS OS=Shewanella piezotolerans
(strain WP3 / JCM 13877) GN=mutS PE=3 SV=1
Length = 860
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++Q+AL+ +MA +GCYVPA A D I+TRIG +D + STF +EM E
Sbjct: 621 MGGKSTYMRQIALITLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTE 680
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ TP SL+L+DE+ R
Sbjct: 681 TANILHNATPNSLVLMDEIGRG 702
>sp|Q045Q5|MUTS_LACGA DNA mismatch repair protein MutS OS=Lactobacillus gasseri (strain
ATCC 33323 / DSM 20243) GN=mutS PE=3 SV=1
Length = 857
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
MSGKS Y++Q+AL+ IMAQ+GC+VPA A + D I+TRIG D + STF +EM E
Sbjct: 611 MSGKSTYMRQMALIAIMAQIGCFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSE 670
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+Q T RSL+L DE+ R
Sbjct: 671 ANDALQHATKRSLVLFDEIGRG 692
>sp|Q5E7G7|MUTS_VIBF1 DNA mismatch repair protein MutS OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=mutS PE=3 SV=2
Length = 854
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M GKS Y++Q AL+ +MA VGCYVPA AE D I+TRIG +D + STF +EM E
Sbjct: 618 MGGKSTYMRQTALIALMAHVGCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTE 677
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
A+I+ T SL+L+DE+ R
Sbjct: 678 TANILHNATKHSLVLMDEIGRG 699
>sp|Q12VC9|MUTS_METBU DNA mismatch repair protein MutS OS=Methanococcoides burtonii
(strain DSM 6242) GN=mutS PE=3 SV=1
Length = 887
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 58/82 (70%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++QV+L+ IMAQ G +VPAS A + D ++TR+G D + STF +EM E
Sbjct: 629 MAGKSTYMRQVSLIVIMAQAGSFVPASHASIGIVDRVFTRVGAFDDLASGQSTFMVEMVE 688
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A+I+ TP+SL+L+DE+ R
Sbjct: 689 LANILNNATPKSLVLLDEIGRG 710
>sp|Q56239|MUTS_THET8 DNA mismatch repair protein MutS OS=Thermus thermophilus (strain
HB8 / ATCC 27634 / DSM 579) GN=mutS PE=1 SV=3
Length = 819
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 59/82 (71%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS +++Q AL+ ++AQ+G +VPA AE L D IYTRIG +D + STF +EM+E
Sbjct: 594 MAGKSTFLRQTALIALLAQIGSFVPAEEAELPLFDGIYTRIGASDDLAGGKSTFMVEMEE 653
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A +++ T RSL+L+DE+ R
Sbjct: 654 VALVLKEATERSLVLLDEVGRG 675
>sp|Q8PWA7|MUTS_METMA DNA mismatch repair protein MutS OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=mutS PE=3 SV=1
Length = 900
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 57/82 (69%)
Query: 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60
M+GKS Y++Q AL+ IMAQ G +VPAS A + D ++TRIG D + STF +EM E
Sbjct: 640 MAGKSTYMRQTALIAIMAQAGSFVPASYASIGVIDQVFTRIGAFDDLASGQSTFMVEMVE 699
Query: 61 IAHIIQFLTPRSLILVDELCRA 82
+A+I+ +P+SL+L+DE+ R
Sbjct: 700 LANILNNASPKSLVLLDEIGRG 721
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,439,153
Number of Sequences: 539616
Number of extensions: 2827046
Number of successful extensions: 9217
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8055
Number of HSP's gapped (non-prelim): 1028
length of query: 223
length of database: 191,569,459
effective HSP length: 113
effective length of query: 110
effective length of database: 130,592,851
effective search space: 14365213610
effective search space used: 14365213610
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)