Query psy7339
Match_columns 223
No_of_seqs 285 out of 1998
Neff 9.1
Searched_HMMs 29240
Date Sat Aug 17 00:14:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7339.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7339hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzw_C 1,2-epoxyphenylacetyl-C 100.0 1.7E-38 5.7E-43 260.3 15.3 190 27-216 15-237 (274)
2 3hrx_A Probable enoyl-COA hydr 100.0 3.3E-38 1.1E-42 256.2 15.1 186 31-216 4-217 (254)
3 4fzw_A 2,3-dehydroadipyl-COA h 100.0 3.1E-38 1.1E-42 256.7 11.5 188 29-216 7-221 (258)
4 3p5m_A Enoyl-COA hydratase/iso 100.0 9.6E-37 3.3E-41 247.6 14.8 187 28-216 7-218 (255)
5 3pea_A Enoyl-COA hydratase/iso 100.0 7.9E-37 2.7E-41 248.9 14.0 186 27-213 6-221 (261)
6 3gow_A PAAG, probable enoyl-CO 100.0 1.2E-36 4E-41 247.0 14.6 186 31-216 4-217 (254)
7 3g64_A Putative enoyl-COA hydr 100.0 1.8E-36 6.2E-41 249.1 15.7 189 28-216 18-240 (279)
8 3kqf_A Enoyl-COA hydratase/iso 100.0 1.2E-36 4.2E-41 248.3 14.0 190 27-216 8-228 (265)
9 3i47_A Enoyl COA hydratase/iso 100.0 2.9E-36 1E-40 246.3 16.0 190 27-217 4-225 (268)
10 4di1_A Enoyl-COA hydratase ECH 100.0 1.2E-36 4.2E-41 249.3 13.1 189 27-216 24-241 (277)
11 3qre_A Enoyl-COA hydratase, EC 100.0 8.4E-37 2.9E-41 252.8 12.2 191 27-217 29-258 (298)
12 2ej5_A Enoyl-COA hydratase sub 100.0 4.5E-36 1.5E-40 244.0 15.6 189 28-216 4-220 (257)
13 3lao_A Enoyl-COA hydratase/iso 100.0 8.1E-37 2.8E-41 248.5 10.7 191 27-217 12-232 (258)
14 3qmj_A Enoyl-COA hydratase, EC 100.0 1.5E-36 5.3E-41 246.7 12.3 190 28-217 7-226 (256)
15 3lke_A Enoyl-COA hydratase; ny 100.0 9.4E-37 3.2E-41 248.7 11.0 189 27-215 4-227 (263)
16 3sll_A Probable enoyl-COA hydr 100.0 4.6E-36 1.6E-40 247.7 14.9 189 28-216 25-251 (290)
17 3moy_A Probable enoyl-COA hydr 100.0 2.2E-36 7.4E-41 246.5 12.3 190 27-216 9-226 (263)
18 1nzy_A Dehalogenase, 4-chlorob 100.0 4.4E-36 1.5E-40 245.6 13.8 188 28-215 4-225 (269)
19 3hin_A Putative 3-hydroxybutyr 100.0 2.2E-36 7.5E-41 247.7 11.8 188 27-216 16-232 (275)
20 3h81_A Enoyl-COA hydratase ECH 100.0 4.4E-36 1.5E-40 246.3 13.2 190 27-216 25-241 (278)
21 3rsi_A Putative enoyl-COA hydr 100.0 3.7E-36 1.3E-40 245.5 12.5 189 27-216 9-228 (265)
22 3pe8_A Enoyl-COA hydratase; em 100.0 2.5E-36 8.5E-41 245.1 11.3 184 27-215 9-217 (256)
23 2j5i_A P-hydroxycinnamoyl COA 100.0 6.9E-36 2.3E-40 245.2 13.7 187 28-214 10-230 (276)
24 3l3s_A Enoyl-COA hydratase/iso 100.0 6.4E-36 2.2E-40 243.8 13.4 190 25-216 4-229 (263)
25 3gkb_A Putative enoyl-COA hydr 100.0 2.7E-36 9.3E-41 248.5 11.3 183 26-209 8-226 (287)
26 3r9q_A Enoyl-COA hydratase/iso 100.0 1.7E-36 5.8E-41 246.9 9.3 189 28-216 12-227 (262)
27 3qk8_A Enoyl-COA hydratase ECH 100.0 9.8E-36 3.4E-40 243.7 13.8 185 27-212 13-229 (272)
28 1szo_A 6-oxocamphor hydrolase; 100.0 8.2E-36 2.8E-40 242.2 13.1 188 28-215 17-233 (257)
29 3r6h_A Enoyl-COA hydratase, EC 100.0 6.5E-36 2.2E-40 239.7 12.1 188 28-217 6-222 (233)
30 1dci_A Dienoyl-COA isomerase; 100.0 1.5E-35 5.1E-40 243.3 14.3 188 28-215 4-234 (275)
31 3fdu_A Putative enoyl-COA hydr 100.0 2.3E-35 8E-40 240.8 15.4 182 27-210 5-217 (266)
32 2j5g_A ALR4455 protein; enzyme 100.0 7.9E-36 2.7E-40 242.9 11.9 188 28-215 24-242 (263)
33 1wz8_A Enoyl-COA hydratase; ly 100.0 1.3E-35 4.5E-40 242.1 13.1 184 28-213 11-227 (264)
34 3swx_A Probable enoyl-COA hydr 100.0 2.7E-36 9.3E-41 246.3 9.0 190 27-216 9-228 (265)
35 3qxz_A Enoyl-COA hydratase/iso 100.0 4.3E-36 1.5E-40 245.0 10.1 191 27-218 7-227 (265)
36 2pbp_A Enoyl-COA hydratase sub 100.0 1.2E-35 4E-40 241.7 12.6 187 29-215 7-220 (258)
37 2f6q_A Peroxisomal 3,2-trans-e 100.0 2.5E-35 8.5E-40 242.3 14.6 184 28-212 27-243 (280)
38 3rrv_A Enoyl-COA hydratase/iso 100.0 1.9E-35 6.6E-40 242.3 13.7 186 27-214 28-244 (276)
39 2a7k_A CARB; crotonase, antibi 100.0 1.1E-35 3.6E-40 241.0 11.9 182 31-213 4-216 (250)
40 4f47_A Enoyl-COA hydratase ECH 100.0 5.9E-36 2E-40 245.9 10.4 189 27-215 20-240 (278)
41 3qxi_A Enoyl-COA hydratase ECH 100.0 7.6E-36 2.6E-40 243.5 11.0 189 27-217 15-229 (265)
42 2ppy_A Enoyl-COA hydratase; be 100.0 2.5E-35 8.6E-40 240.6 13.7 188 27-215 9-227 (265)
43 3tlf_A Enoyl-COA hydratase/iso 100.0 5.8E-36 2E-40 245.5 9.5 188 27-216 11-237 (274)
44 2vx2_A Enoyl-COA hydratase dom 100.0 1.9E-35 6.5E-40 243.6 12.4 187 28-215 34-250 (287)
45 1mj3_A Enoyl-COA hydratase, mi 100.0 2.5E-35 8.5E-40 240.0 12.2 182 34-215 14-222 (260)
46 3myb_A Enoyl-COA hydratase; ss 100.0 4.2E-35 1.4E-39 241.4 13.4 187 29-216 26-244 (286)
47 3trr_A Probable enoyl-COA hydr 100.0 6.2E-36 2.1E-40 242.9 8.1 187 27-216 7-219 (256)
48 4eml_A Naphthoate synthase; 1, 100.0 4.6E-35 1.6E-39 240.1 13.2 185 27-211 10-230 (275)
49 2fbm_A Y chromosome chromodoma 100.0 2.2E-35 7.5E-40 243.6 11.3 184 28-212 24-241 (291)
50 2gtr_A CDY-like, chromodomain 100.0 2.6E-35 8.8E-40 240.1 11.4 184 28-212 6-223 (261)
51 3ot6_A Enoyl-COA hydratase/iso 100.0 3.2E-35 1.1E-39 235.5 11.5 186 29-217 8-222 (232)
52 3t89_A 1,4-dihydroxy-2-naphtho 100.0 1.2E-34 4E-39 239.0 14.7 185 27-211 27-244 (289)
53 2q35_A CURF; crotonase, lyase; 100.0 7.5E-36 2.6E-40 240.7 7.3 182 31-213 7-213 (243)
54 3t8b_A 1,4-dihydroxy-2-naphtho 100.0 9.5E-35 3.2E-39 243.4 13.7 177 35-211 65-289 (334)
55 1uiy_A Enoyl-COA hydratase; ly 100.0 5.3E-35 1.8E-39 237.2 11.4 183 31-215 4-218 (253)
56 1ef8_A Methylmalonyl COA decar 100.0 5.8E-35 2E-39 238.0 11.4 189 27-217 4-223 (261)
57 3h0u_A Putative enoyl-COA hydr 100.0 4.5E-35 1.6E-39 241.5 10.9 186 26-212 7-226 (289)
58 3njd_A Enoyl-COA hydratase; ss 100.0 7.2E-34 2.5E-38 238.7 18.3 183 28-213 36-277 (333)
59 1pjh_A Enoyl-COA isomerase; EC 100.0 1.3E-34 4.6E-39 238.1 13.5 186 27-212 9-241 (280)
60 2uzf_A Naphthoate synthase; ly 100.0 3.4E-34 1.1E-38 234.8 15.7 181 28-208 14-225 (273)
61 3r9t_A ECHA1_1; ssgcid, seattl 100.0 1.2E-35 4.2E-40 242.6 7.0 186 27-213 9-227 (267)
62 1sg4_A 3,2-trans-enoyl-COA iso 100.0 1.8E-34 6.2E-39 234.9 13.4 183 30-213 8-222 (260)
63 3oc7_A Enoyl-COA hydratase; se 100.0 4.1E-34 1.4E-38 233.7 14.8 180 33-215 17-230 (267)
64 3t3w_A Enoyl-COA hydratase; ss 100.0 1.4E-33 4.8E-38 231.7 17.6 184 27-212 20-237 (279)
65 3he2_A Enoyl-COA hydratase ECH 100.0 3.1E-34 1.1E-38 233.4 13.2 178 27-210 21-223 (264)
66 4hdt_A 3-hydroxyisobutyryl-COA 100.0 1.1E-33 3.6E-38 239.1 16.3 187 25-212 7-281 (353)
67 3m6n_A RPFF protein; enoyl-COA 100.0 5.8E-34 2E-38 236.6 12.8 184 31-215 36-264 (305)
68 1hzd_A AUH, AU-binding protein 100.0 4.3E-34 1.5E-38 234.1 11.6 182 34-215 19-234 (272)
69 3hp0_A Putative polyketide bio 100.0 6.5E-33 2.2E-37 226.3 16.5 180 27-210 7-217 (267)
70 3isa_A Putative enoyl-COA hydr 100.0 1E-32 3.6E-37 223.7 16.5 176 29-209 9-214 (254)
71 3bpt_A 3-hydroxyisobutyryl-COA 100.0 2.8E-33 9.6E-38 237.6 13.3 191 24-215 3-292 (363)
72 3ju1_A Enoyl-COA hydratase/iso 100.0 7.4E-33 2.5E-37 237.6 12.8 188 28-216 43-338 (407)
73 2np9_A DPGC; protein inhibitor 100.0 1.3E-30 4.3E-35 224.2 9.6 180 28-211 168-401 (440)
74 2w3p_A Benzoyl-COA-dihydrodiol 100.0 3.2E-31 1.1E-35 230.3 3.8 185 28-213 22-256 (556)
75 3zwc_A Peroxisomal bifunctiona 100.0 1.9E-29 6.7E-34 230.1 15.1 162 31-197 25-212 (742)
76 1wdk_A Fatty oxidation complex 100.0 4E-29 1.4E-33 228.5 15.6 168 27-195 6-208 (715)
77 2wtb_A MFP2, fatty acid multif 100.0 1.4E-29 4.8E-34 231.7 9.9 166 28-195 8-207 (725)
78 3bf0_A Protease 4; bacterial, 99.3 7.6E-13 2.6E-17 118.7 5.3 145 35-190 301-516 (593)
79 2o8b_B DNA mismatch repair pro 99.3 1.7E-12 5.9E-17 122.5 6.3 99 1-99 799-897 (1022)
80 3thx_A DNA mismatch repair pro 99.3 2.2E-12 7.4E-17 120.6 5.9 100 1-100 672-771 (934)
81 3thx_B DNA mismatch repair pro 99.2 1.4E-11 5E-16 114.8 5.5 99 1-99 683-781 (918)
82 1wb9_A DNA mismatch repair pro 99.2 3.1E-11 1.1E-15 111.4 7.6 98 1-98 617-714 (800)
83 3rst_A Signal peptide peptidas 99.2 9.1E-11 3.1E-15 93.9 8.6 126 53-190 29-225 (240)
84 1ewq_A DNA mismatch repair pro 99.1 9.8E-11 3.4E-15 107.6 7.0 90 1-90 586-675 (765)
85 3viv_A 441AA long hypothetical 99.0 1.2E-09 4.1E-14 86.5 7.4 118 50-183 19-180 (230)
86 2f9y_B Acetyl-coenzyme A carbo 98.7 9.1E-08 3.1E-12 78.8 10.5 132 48-195 132-280 (304)
87 1y7o_A ATP-dependent CLP prote 98.6 4E-08 1.4E-12 77.2 6.1 113 52-180 56-214 (218)
88 2f9i_A Acetyl-coenzyme A carbo 98.4 2.8E-06 9.6E-11 70.5 11.3 141 51-201 142-312 (327)
89 2f9y_A Acetyl-COA carboxylase, 98.2 5.6E-06 1.9E-10 69.0 9.6 141 51-201 156-326 (339)
90 2cby_A ATP-dependent CLP prote 97.6 6.3E-05 2.1E-09 58.5 4.9 117 53-185 39-200 (208)
91 1yg6_A ATP-dependent CLP prote 96.3 0.0042 1.4E-07 47.5 4.4 110 53-178 38-191 (193)
92 2f6i_A ATP-dependent CLP prote 96.1 0.022 7.5E-07 44.2 7.6 58 122-179 123-204 (215)
93 1tg6_A Putative ATP-dependent 96.0 0.0099 3.4E-07 47.9 5.6 57 122-178 167-247 (277)
94 2w3p_A Benzoyl-COA-dihydrodiol 95.9 0.027 9.2E-07 49.5 8.4 89 120-208 414-505 (556)
95 3bf0_A Protease 4; bacterial, 95.9 0.029 1E-06 50.2 8.5 124 53-187 70-272 (593)
96 4gm2_A ATP-dependent CLP prote 95.5 0.018 6.2E-07 44.3 5.2 59 121-179 122-205 (205)
97 3p2l_A ATP-dependent CLP prote 95.5 0.013 4.4E-07 45.1 4.2 60 122-181 115-199 (201)
98 3qwd_A ATP-dependent CLP prote 95.5 0.025 8.5E-07 43.5 5.8 112 52-179 38-193 (203)
99 1pix_A Glutaconyl-COA decarbox 90.1 0.96 3.3E-05 40.3 7.8 46 145-190 230-284 (587)
100 2f9i_B Acetyl-coenzyme A carbo 88.1 4.4 0.00015 32.5 9.9 30 162-191 250-279 (285)
101 1vrg_A Propionyl-COA carboxyla 86.2 7 0.00024 34.3 10.7 136 52-193 348-511 (527)
102 3hr8_A Protein RECA; alpha and 84.6 4.9 0.00017 33.4 8.7 78 1-84 71-153 (356)
103 1jbk_A CLPB protein; beta barr 81.9 4.2 0.00014 29.2 6.6 34 53-86 98-131 (195)
104 1htw_A HI0065; nucleotide-bind 81.8 0.55 1.9E-05 34.2 1.6 15 1-15 43-57 (158)
105 3io5_A Recombination and repai 80.8 7.3 0.00025 32.0 8.1 80 1-84 38-125 (333)
106 1xp8_A RECA protein, recombina 79.9 9.4 0.00032 31.7 8.7 79 1-83 84-165 (366)
107 1x0u_A Hypothetical methylmalo 79.9 9.6 0.00033 33.4 9.1 137 51-193 342-506 (522)
108 2p65_A Hypothetical protein PF 78.6 5.6 0.00019 28.4 6.4 34 53-86 98-131 (187)
109 1ye8_A Protein THEP1, hypothet 77.1 0.93 3.2E-05 33.6 1.6 15 1-15 10-24 (178)
110 1pix_A Glutaconyl-COA decarbox 75.9 4.2 0.00014 36.2 5.7 77 120-196 473-563 (587)
111 2onk_A Molybdate/tungstate ABC 75.7 1.1 3.6E-05 35.1 1.6 12 1-12 34-45 (240)
112 2pcj_A ABC transporter, lipopr 75.6 0.86 2.9E-05 35.1 1.1 11 1-11 40-50 (224)
113 3b85_A Phosphate starvation-in 75.5 1.1 3.8E-05 34.2 1.7 14 1-14 32-45 (208)
114 3tif_A Uncharacterized ABC tra 75.4 0.88 3E-05 35.4 1.1 12 1-12 41-52 (235)
115 3c8u_A Fructokinase; YP_612366 75.2 1.1 3.8E-05 33.8 1.6 14 1-14 32-45 (208)
116 1on3_A Methylmalonyl-COA carbo 74.8 22 0.00077 31.0 9.9 136 52-193 344-507 (523)
117 2b8t_A Thymidine kinase; deoxy 74.0 3.1 0.00011 32.1 3.9 16 1-16 22-37 (223)
118 3bh0_A DNAB-like replicative h 73.3 5.1 0.00017 32.4 5.2 30 55-84 164-195 (315)
119 2ehv_A Hypothetical protein PH 73.3 2.2 7.4E-05 32.7 2.9 16 1-16 40-55 (251)
120 2cbz_A Multidrug resistance-as 73.1 1.1 3.7E-05 34.9 1.1 12 1-12 41-52 (237)
121 2d2e_A SUFC protein; ABC-ATPas 73.1 1.3 4.5E-05 34.7 1.6 12 1-12 39-50 (250)
122 2zr9_A Protein RECA, recombina 72.8 4.3 0.00015 33.5 4.7 79 1-83 71-152 (349)
123 2vhj_A Ntpase P4, P4; non- hyd 72.5 23 0.0008 29.0 8.9 14 1-14 133-146 (331)
124 3asz_A Uridine kinase; cytidin 72.5 1.4 4.9E-05 33.0 1.6 14 1-14 16-29 (211)
125 2r6a_A DNAB helicase, replicat 72.4 9.4 0.00032 32.5 6.9 30 55-84 298-327 (454)
126 2zu0_C Probable ATP-dependent 72.3 1.4 4.8E-05 34.9 1.6 12 1-12 56-67 (267)
127 1znw_A Guanylate kinase, GMP k 72.3 1.4 5E-05 33.1 1.6 13 1-13 30-42 (207)
128 2q6t_A DNAB replication FORK h 72.2 5.6 0.00019 33.8 5.4 31 55-85 295-325 (444)
129 1b0u_A Histidine permease; ABC 72.0 1.2 4E-05 35.3 1.1 11 1-11 42-52 (262)
130 1sgw_A Putative ABC transporte 72.0 1.2 4.1E-05 34.2 1.1 11 1-11 45-55 (214)
131 1ji0_A ABC transporter; ATP bi 72.0 1.2 4.1E-05 34.7 1.1 11 1-11 42-52 (240)
132 1g6h_A High-affinity branched- 71.7 1.2 4.2E-05 35.1 1.1 11 1-11 43-53 (257)
133 2pze_A Cystic fibrosis transme 71.6 1.2 4.2E-05 34.4 1.1 12 1-12 44-55 (229)
134 1zp6_A Hypothetical protein AT 71.5 1.6 5.3E-05 32.1 1.6 12 1-12 19-30 (191)
135 1vpl_A ABC transporter, ATP-bi 71.3 1.3 4.3E-05 35.1 1.1 11 1-11 51-61 (256)
136 2olj_A Amino acid ABC transpor 71.3 1.3 4.3E-05 35.2 1.1 11 1-11 60-70 (263)
137 2yz2_A Putative ABC transporte 71.1 1.3 4.4E-05 35.2 1.1 12 1-12 43-54 (266)
138 1mv5_A LMRA, multidrug resista 71.0 1.3 4.4E-05 34.6 1.1 12 1-12 38-49 (243)
139 4g1u_C Hemin import ATP-bindin 71.0 1.3 4.4E-05 35.2 1.1 12 1-12 47-58 (266)
140 4gp7_A Metallophosphoesterase; 70.8 1.3 4.6E-05 32.3 1.1 10 1-10 19-28 (171)
141 2ff7_A Alpha-hemolysin translo 70.7 1.3 4.5E-05 34.7 1.1 11 1-11 45-55 (247)
142 3sop_A Neuronal-specific septi 70.7 1.6 5.5E-05 34.7 1.6 16 1-16 12-27 (270)
143 3gfo_A Cobalt import ATP-bindi 70.7 1.3 4.5E-05 35.4 1.1 12 1-12 44-55 (275)
144 2qi9_C Vitamin B12 import ATP- 70.3 1.4 4.7E-05 34.7 1.1 12 1-12 36-47 (249)
145 4a74_A DNA repair and recombin 70.3 1.7 5.8E-05 32.8 1.6 15 1-15 35-49 (231)
146 3tr0_A Guanylate kinase, GMP k 70.1 1.7 5.9E-05 32.2 1.6 13 1-13 17-29 (205)
147 2pjz_A Hypothetical protein ST 69.7 1.4 4.9E-05 34.9 1.1 12 1-12 40-51 (263)
148 2ihy_A ABC transporter, ATP-bi 69.3 1.5 5E-05 35.1 1.1 11 1-11 57-67 (279)
149 2ixe_A Antigen peptide transpo 69.2 1.5 5.1E-05 34.9 1.1 11 1-11 55-65 (271)
150 3bgw_A DNAB-like replicative h 69.0 8.1 0.00028 33.0 5.7 31 55-85 293-325 (444)
151 3iav_A Propionyl-COA carboxyla 68.9 18 0.00063 31.7 8.0 135 53-193 351-514 (530)
152 3fvq_A Fe(3+) IONS import ATP- 68.4 1.9 6.5E-05 35.9 1.6 12 1-12 40-51 (359)
153 2ghi_A Transport protein; mult 68.3 1.6 5.5E-05 34.5 1.1 12 1-12 56-67 (260)
154 2nq2_C Hypothetical ABC transp 68.1 1.6 5.5E-05 34.3 1.0 12 1-12 41-52 (253)
155 2eyu_A Twitching motility prot 67.9 2 6.8E-05 34.0 1.6 14 1-14 35-48 (261)
156 1z47_A CYSA, putative ABC-tran 67.9 2 6.7E-05 35.7 1.6 12 1-12 51-62 (355)
157 2yyz_A Sugar ABC transporter, 67.6 2 6.9E-05 35.8 1.6 12 1-12 39-50 (359)
158 2it1_A 362AA long hypothetical 67.4 2 7E-05 35.8 1.6 12 1-12 39-50 (362)
159 1v43_A Sugar-binding transport 67.2 2.1 7.1E-05 35.9 1.6 12 1-12 47-58 (372)
160 1g29_1 MALK, maltose transport 67.0 2.1 7.2E-05 35.8 1.6 12 1-12 39-50 (372)
161 3h4m_A Proteasome-activating n 66.8 16 0.00053 28.5 6.7 63 1-83 61-123 (285)
162 3rlf_A Maltose/maltodextrin im 66.7 2.1 7.3E-05 35.9 1.6 12 1-12 39-50 (381)
163 2jeo_A Uridine-cytidine kinase 66.3 2.3 7.8E-05 32.9 1.6 14 1-14 35-48 (245)
164 2bdt_A BH3686; alpha-beta prot 66.2 2.3 8E-05 31.2 1.6 12 1-12 12-23 (189)
165 1kag_A SKI, shikimate kinase I 65.9 2.4 8.3E-05 30.5 1.6 13 1-13 14-26 (173)
166 3aez_A Pantothenate kinase; tr 65.4 2.4 8.1E-05 34.5 1.6 14 1-14 100-113 (312)
167 3tui_C Methionine import ATP-b 65.3 2.4 8.1E-05 35.4 1.6 12 1-12 64-75 (366)
168 2bzr_A Propionyl-COA carboxyla 65.0 31 0.0011 30.3 8.7 135 52-192 365-531 (548)
169 3a00_A Guanylate kinase, GMP k 64.9 2.5 8.7E-05 31.1 1.6 23 170-192 160-182 (186)
170 4eun_A Thermoresistant glucoki 64.7 2.6 8.8E-05 31.4 1.6 14 1-14 39-52 (200)
171 3kta_A Chromosome segregation 64.6 3 0.0001 30.3 1.9 15 1-15 36-50 (182)
172 1z6g_A Guanylate kinase; struc 64.5 2.6 8.9E-05 32.1 1.6 13 1-13 33-45 (218)
173 2bbs_A Cystic fibrosis transme 64.5 2.1 7.1E-05 34.5 1.1 12 1-12 74-85 (290)
174 2bbw_A Adenylate kinase 4, AK4 64.2 2.6 9E-05 32.5 1.6 13 1-13 37-49 (246)
175 2i3b_A HCR-ntpase, human cance 64.1 2.7 9.1E-05 31.5 1.6 19 1-21 11-29 (189)
176 1lvg_A Guanylate kinase, GMP k 64.0 2.7 9.3E-05 31.4 1.6 13 1-13 14-26 (198)
177 3d31_A Sulfate/molybdate ABC t 63.4 1.9 6.5E-05 35.7 0.7 12 1-12 36-47 (348)
178 3jvv_A Twitching mobility prot 63.2 2.7 9.4E-05 34.8 1.6 13 1-13 133-145 (356)
179 3vfd_A Spastin; ATPase, microt 62.9 34 0.0012 28.2 8.3 28 57-85 195-222 (389)
180 1kgd_A CASK, peripheral plasma 62.7 3 0.0001 30.5 1.6 24 169-192 153-176 (180)
181 4a1f_A DNAB helicase, replicat 62.4 4.5 0.00015 33.3 2.7 28 55-82 140-168 (338)
182 3gd7_A Fusion complex of cysti 61.8 3 0.0001 35.1 1.6 12 1-12 57-68 (390)
183 3ohm_A Guanine nucleotide-bind 60.9 3.7 0.00013 33.6 2.0 13 2-14 18-30 (327)
184 3uie_A Adenylyl-sulfate kinase 60.9 3.3 0.00011 30.8 1.6 15 1-15 35-49 (200)
185 1knq_A Gluconate kinase; ALFA/ 60.7 3.4 0.00012 29.8 1.6 14 1-14 18-31 (175)
186 3syl_A Protein CBBX; photosynt 60.7 56 0.0019 25.5 9.0 16 1-16 77-92 (309)
187 1s96_A Guanylate kinase, GMP k 60.7 3.4 0.00011 31.7 1.6 25 169-193 172-196 (219)
188 2w0m_A SSO2452; RECA, SSPF, un 60.4 4.5 0.00015 30.3 2.3 16 1-16 33-48 (235)
189 2if2_A Dephospho-COA kinase; a 60.3 3.5 0.00012 30.6 1.6 13 1-13 11-23 (204)
190 1cip_A Protein (guanine nucleo 60.2 3.9 0.00013 33.9 2.0 13 2-14 43-55 (353)
191 3ec2_A DNA replication protein 60.1 3.5 0.00012 30.0 1.6 15 1-15 48-62 (180)
192 1azs_C GS-alpha; complex (lyas 60.0 3.9 0.00013 34.6 2.0 14 2-15 51-64 (402)
193 4fid_A G protein alpha subunit 59.8 3.8 0.00013 33.8 1.8 13 2-14 16-28 (340)
194 2j41_A Guanylate kinase; GMP, 59.7 3.6 0.00012 30.4 1.6 13 1-13 16-28 (207)
195 1oxx_K GLCV, glucose, ABC tran 59.6 1.9 6.4E-05 35.8 -0.1 12 1-12 41-52 (353)
196 2xtz_A Guanine nucleotide-bind 59.5 4.1 0.00014 33.8 2.0 13 2-14 20-32 (354)
197 1nij_A Hypothetical protein YJ 59.0 3.5 0.00012 33.4 1.5 12 1-12 14-25 (318)
198 1rz3_A Hypothetical protein rb 58.8 3.8 0.00013 30.5 1.6 13 1-13 32-44 (201)
199 1sq5_A Pantothenate kinase; P- 58.5 3.8 0.00013 33.0 1.6 13 1-13 90-102 (308)
200 2v9p_A Replication protein E1; 58.4 3.8 0.00013 33.3 1.6 15 1-15 136-150 (305)
201 1p9r_A General secretion pathw 58.4 3.7 0.00013 34.9 1.6 13 1-13 177-189 (418)
202 1cr0_A DNA primase/helicase; R 58.4 4.6 0.00016 32.0 2.1 29 55-83 132-160 (296)
203 2kjq_A DNAA-related protein; s 58.4 3.9 0.00013 29.1 1.5 16 1-16 46-61 (149)
204 1f2t_A RAD50 ABC-ATPase; DNA d 57.8 5.6 0.00019 28.3 2.3 16 1-16 33-48 (149)
205 2ius_A DNA translocase FTSK; n 57.6 4.3 0.00015 35.5 1.9 18 1-18 177-194 (512)
206 2gza_A Type IV secretion syste 57.4 3.9 0.00013 33.8 1.6 12 1-12 185-196 (361)
207 2qz4_A Paraplegin; AAA+, SPG7, 57.4 35 0.0012 25.9 7.1 27 56-83 85-111 (262)
208 1u94_A RECA protein, recombina 57.0 12 0.00042 30.9 4.5 79 1-83 73-154 (356)
209 3tqc_A Pantothenate kinase; bi 56.9 5 0.00017 32.7 2.1 13 1-13 102-114 (321)
210 3t61_A Gluconokinase; PSI-biol 56.9 4.3 0.00015 30.1 1.6 14 1-14 28-41 (202)
211 1ly1_A Polynucleotide kinase; 56.5 4.5 0.00015 29.1 1.6 13 1-13 12-24 (181)
212 1jjv_A Dephospho-COA kinase; P 56.0 4.5 0.00015 30.1 1.6 13 1-13 12-24 (206)
213 3b9p_A CG5977-PA, isoform A; A 56.0 28 0.00097 27.2 6.5 27 58-85 102-128 (297)
214 3kb2_A SPBC2 prophage-derived 55.8 4.6 0.00016 28.7 1.6 12 1-12 11-22 (173)
215 2pt7_A CAG-ALFA; ATPase, prote 55.6 3.2 0.00011 33.9 0.8 12 1-12 181-192 (330)
216 2npi_A Protein CLP1; CLP1-PCF1 55.4 4.4 0.00015 34.8 1.6 14 1-14 148-161 (460)
217 1lw7_A Transcriptional regulat 55.2 4 0.00014 33.7 1.3 13 1-13 180-192 (365)
218 2iut_A DNA translocase FTSK; n 55.1 5 0.00017 35.6 1.9 18 1-18 224-241 (574)
219 3lnc_A Guanylate kinase, GMP k 55.1 3.6 0.00012 31.3 0.9 12 1-12 37-48 (231)
220 2jaq_A Deoxyguanosine kinase; 54.8 4.9 0.00017 29.5 1.6 13 1-13 10-22 (205)
221 2vp4_A Deoxynucleoside kinase; 54.6 2.7 9.4E-05 32.2 0.1 13 1-13 30-42 (230)
222 2z43_A DNA repair and recombin 54.2 3.8 0.00013 33.3 0.9 16 1-16 117-132 (324)
223 1cke_A CK, MSSA, protein (cyti 54.1 5 0.00017 30.2 1.6 13 1-13 15-27 (227)
224 1zcb_A G alpha I/13; GTP-bindi 54.1 5.6 0.00019 33.0 2.0 14 1-14 43-56 (362)
225 2ewv_A Twitching motility prot 53.9 4.9 0.00017 33.5 1.6 14 1-14 146-159 (372)
226 2cvh_A DNA repair and recombin 53.3 5.3 0.00018 29.7 1.6 13 1-13 30-42 (220)
227 4e22_A Cytidylate kinase; P-lo 53.2 5.3 0.00018 31.1 1.6 20 1-25 37-56 (252)
228 3d8b_A Fidgetin-like protein 1 53.0 34 0.0012 27.9 6.6 62 1-82 127-188 (357)
229 3cm0_A Adenylate kinase; ATP-b 52.6 5.6 0.00019 28.9 1.6 13 1-13 14-26 (186)
230 2yvu_A Probable adenylyl-sulfa 52.4 5.7 0.00019 29.0 1.6 21 1-23 23-43 (186)
231 2pez_A Bifunctional 3'-phospho 52.1 5.8 0.0002 28.7 1.6 21 1-23 15-35 (179)
232 1v5w_A DMC1, meiotic recombina 52.0 3.8 0.00013 33.6 0.6 17 1-17 132-148 (343)
233 3szr_A Interferon-induced GTP- 52.0 9 0.00031 34.1 3.1 26 1-34 55-80 (608)
234 3n6r_B Propionyl-COA carboxyla 51.6 78 0.0027 27.7 8.8 134 53-192 357-514 (531)
235 1yqt_A RNAse L inhibitor; ATP- 51.5 5.5 0.00019 34.9 1.6 12 1-12 57-68 (538)
236 2qt1_A Nicotinamide riboside k 51.5 5.9 0.0002 29.4 1.6 13 1-13 31-43 (207)
237 1qhx_A CPT, protein (chloramph 51.4 6 0.00021 28.4 1.6 13 1-13 13-25 (178)
238 3lw7_A Adenylate kinase relate 51.4 5.6 0.00019 28.1 1.4 11 1-11 11-21 (179)
239 3nh6_A ATP-binding cassette SU 51.3 3.3 0.00011 33.6 0.2 12 1-12 90-101 (306)
240 3eie_A Vacuolar protein sortin 50.5 32 0.0011 27.5 6.0 64 1-84 61-124 (322)
241 2oap_1 GSPE-2, type II secreti 50.4 5.1 0.00017 35.0 1.2 11 1-11 270-280 (511)
242 2i1q_A DNA repair and recombin 50.2 3.4 0.00012 33.4 0.0 18 1-18 108-125 (322)
243 1oix_A RAS-related protein RAB 50.1 6.5 0.00022 28.8 1.6 12 1-12 39-50 (191)
244 1n0w_A DNA repair protein RAD5 50.1 6.4 0.00022 29.8 1.6 17 1-17 34-50 (243)
245 3b9q_A Chloroplast SRP recepto 50.0 6.2 0.00021 31.8 1.6 15 1-15 110-124 (302)
246 1tf7_A KAIC; homohexamer, hexa 50.0 8.2 0.00028 33.6 2.5 18 1-18 49-66 (525)
247 3vaa_A Shikimate kinase, SK; s 50.0 6.5 0.00022 29.1 1.6 14 1-14 35-48 (199)
248 1tev_A UMP-CMP kinase; ploop, 49.9 6.6 0.00022 28.5 1.6 13 1-13 13-25 (196)
249 1kht_A Adenylate kinase; phosp 49.8 6.6 0.00023 28.4 1.6 13 1-13 13-25 (192)
250 1xwi_A SKD1 protein; VPS4B, AA 49.6 37 0.0013 27.3 6.2 28 56-84 92-119 (322)
251 1np6_A Molybdopterin-guanine d 49.6 6.7 0.00023 28.8 1.6 21 1-23 16-36 (174)
252 3ozx_A RNAse L inhibitor; ATP 49.4 5.2 0.00018 35.1 1.1 12 1-12 35-46 (538)
253 1q57_A DNA primase/helicase; d 49.3 16 0.00055 31.5 4.2 29 55-83 339-367 (503)
254 1nlf_A Regulatory protein REPA 49.3 8 0.00027 30.4 2.1 14 1-14 40-53 (279)
255 3kl4_A SRP54, signal recogniti 49.2 41 0.0014 28.5 6.6 14 1-14 107-120 (433)
256 3qks_A DNA double-strand break 49.2 8.9 0.00031 28.7 2.3 16 1-16 33-48 (203)
257 2rhm_A Putative kinase; P-loop 48.8 7 0.00024 28.4 1.6 13 1-13 15-27 (193)
258 2qag_B Septin-6, protein NEDD5 48.8 6.4 0.00022 33.5 1.5 14 1-14 52-65 (427)
259 3t15_A Ribulose bisphosphate c 48.8 25 0.00084 27.9 5.0 15 1-15 46-60 (293)
260 1nks_A Adenylate kinase; therm 48.7 7 0.00024 28.3 1.6 20 1-22 11-30 (194)
261 2dyk_A GTP-binding protein; GT 48.5 28 0.00094 23.9 4.8 13 1-13 11-23 (161)
262 1qhl_A Protein (cell division 47.9 6 0.00021 30.5 1.1 15 1-15 37-51 (227)
263 1rj9_A FTSY, signal recognitio 47.9 7.1 0.00024 31.5 1.6 15 1-15 112-126 (304)
264 3iav_A Propionyl-COA carboxyla 47.9 1.4E+02 0.0048 26.0 12.2 44 147-192 207-258 (530)
265 1via_A Shikimate kinase; struc 47.9 7.4 0.00025 28.0 1.6 13 1-13 14-26 (175)
266 2obl_A ESCN; ATPase, hydrolase 47.2 7.3 0.00025 32.1 1.6 14 1-14 81-94 (347)
267 1gtv_A TMK, thymidylate kinase 47.2 4.9 0.00017 29.9 0.5 13 1-13 10-22 (214)
268 3j16_B RLI1P; ribosome recycli 47.0 7.1 0.00024 34.8 1.6 12 1-12 113-124 (608)
269 3euj_A Chromosome partition pr 46.9 7.3 0.00025 33.8 1.6 14 1-14 39-52 (483)
270 2f9l_A RAB11B, member RAS onco 46.8 7.8 0.00027 28.4 1.6 12 1-12 15-26 (199)
271 2pbr_A DTMP kinase, thymidylat 46.7 7.9 0.00027 28.1 1.6 22 1-24 10-31 (195)
272 2v1u_A Cell division control p 46.6 60 0.002 26.0 7.2 15 1-15 54-68 (387)
273 2yv5_A YJEQ protein; hydrolase 46.4 7.7 0.00026 31.1 1.6 12 1-12 175-186 (302)
274 2f1r_A Molybdopterin-guanine d 46.2 5.3 0.00018 29.3 0.5 12 2-13 13-24 (171)
275 1ixz_A ATP-dependent metallopr 46.1 7.9 0.00027 29.8 1.6 13 1-13 59-71 (254)
276 3cmu_A Protein RECA, recombina 46.1 50 0.0017 34.0 7.4 81 1-84 742-824 (2050)
277 2qm8_A GTPase/ATPase; G protei 45.9 7.8 0.00027 31.7 1.6 14 1-14 65-78 (337)
278 3tau_A Guanylate kinase, GMP k 45.9 8.2 0.00028 28.9 1.6 26 168-193 162-187 (208)
279 2plr_A DTMP kinase, probable t 45.9 8.2 0.00028 28.5 1.6 13 1-13 14-26 (213)
280 2x8a_A Nuclear valosin-contain 45.9 8 0.00027 30.5 1.6 13 1-13 54-66 (274)
281 1yqt_A RNAse L inhibitor; ATP- 45.8 7.7 0.00026 34.0 1.6 12 1-12 322-333 (538)
282 3bk7_A ABC transporter ATP-bin 45.7 7.7 0.00026 34.6 1.6 12 1-12 392-403 (607)
283 2qor_A Guanylate kinase; phosp 45.6 8.3 0.00028 28.6 1.6 13 1-13 22-34 (204)
284 1vht_A Dephospho-COA kinase; s 45.5 8.3 0.00028 28.9 1.6 12 1-12 14-25 (218)
285 2vli_A Antibiotic resistance p 45.3 7.1 0.00024 28.1 1.1 12 1-12 15-26 (183)
286 1tq4_A IIGP1, interferon-induc 45.2 8.1 0.00028 32.7 1.6 12 1-12 79-90 (413)
287 2z0h_A DTMP kinase, thymidylat 45.2 8.6 0.00029 28.0 1.6 22 1-24 10-31 (197)
288 3d3q_A TRNA delta(2)-isopenten 44.5 27 0.00094 28.6 4.6 14 1-14 17-30 (340)
289 2pt5_A Shikimate kinase, SK; a 44.4 9 0.00031 27.1 1.6 13 1-13 10-22 (168)
290 3e70_C DPA, signal recognition 44.2 8.7 0.0003 31.4 1.6 14 1-14 139-152 (328)
291 3iij_A Coilin-interacting nucl 44.1 9.2 0.00031 27.6 1.6 13 1-13 21-33 (180)
292 1e6c_A Shikimate kinase; phosp 43.4 9.6 0.00033 27.1 1.6 13 1-13 12-24 (173)
293 3ozx_A RNAse L inhibitor; ATP 43.2 7.4 0.00025 34.2 1.1 12 1-12 304-315 (538)
294 2og2_A Putative signal recogni 42.9 9.3 0.00032 31.7 1.6 15 1-15 167-181 (359)
295 3bk7_A ABC transporter ATP-bin 42.8 7.5 0.00026 34.7 1.1 12 1-12 127-138 (607)
296 2dr3_A UPF0273 protein PH0284; 42.6 13 0.00044 28.1 2.3 16 1-16 33-48 (247)
297 2wwf_A Thymidilate kinase, put 42.6 9.8 0.00034 28.1 1.6 13 1-13 20-32 (212)
298 1m7g_A Adenylylsulfate kinase; 42.6 9.9 0.00034 28.4 1.6 14 1-14 35-48 (211)
299 1odf_A YGR205W, hypothetical 3 42.6 12 0.0004 29.9 2.1 15 1-15 41-55 (290)
300 3j16_B RLI1P; ribosome recycli 42.5 9.2 0.00031 34.1 1.6 12 1-12 388-399 (608)
301 1iy2_A ATP-dependent metallopr 42.4 9.7 0.00033 29.8 1.6 13 1-13 83-95 (278)
302 2dpy_A FLII, flagellum-specifi 42.3 9.5 0.00032 32.5 1.6 14 1-14 167-180 (438)
303 2yhs_A FTSY, cell division pro 42.1 9.6 0.00033 33.2 1.6 14 1-14 303-316 (503)
304 1qf9_A UMP/CMP kinase, protein 42.1 10 0.00035 27.4 1.6 13 1-13 16-28 (194)
305 1qvr_A CLPB protein; coiled co 42.1 74 0.0025 29.4 7.7 77 1-86 201-279 (854)
306 2v54_A DTMP kinase, thymidylat 42.0 10 0.00035 27.8 1.6 13 1-13 14-26 (204)
307 1u0l_A Probable GTPase ENGC; p 41.9 9.3 0.00032 30.6 1.4 12 1-12 179-190 (301)
308 2bwj_A Adenylate kinase 5; pho 41.9 10 0.00035 27.6 1.6 13 1-13 22-34 (199)
309 2ocp_A DGK, deoxyguanosine kin 41.9 10 0.00035 29.0 1.6 13 1-13 12-24 (241)
310 4i1u_A Dephospho-COA kinase; s 41.8 12 0.00041 28.5 1.9 18 1-24 19-36 (210)
311 2qnr_A Septin-2, protein NEDD5 41.7 10 0.00034 30.4 1.6 13 1-13 28-40 (301)
312 2iyv_A Shikimate kinase, SK; t 41.3 11 0.00037 27.3 1.6 13 1-13 12-24 (184)
313 1xjc_A MOBB protein homolog; s 41.3 11 0.00037 27.6 1.6 22 1-24 14-35 (169)
314 1uf9_A TT1252 protein; P-loop, 41.3 11 0.00036 27.6 1.6 13 1-13 18-30 (203)
315 1zd8_A GTP:AMP phosphotransfer 41.3 11 0.00036 28.5 1.6 13 1-13 17-29 (227)
316 3n6r_B Propionyl-COA carboxyla 41.1 1.8E+02 0.0062 25.4 12.5 44 147-192 215-266 (531)
317 2c95_A Adenylate kinase 1; tra 41.0 11 0.00037 27.4 1.6 13 1-13 19-31 (196)
318 2orv_A Thymidine kinase; TP4A 40.9 20 0.00069 27.8 3.1 18 1-18 29-46 (234)
319 3qf7_A RAD50; ABC-ATPase, ATPa 40.8 13 0.00046 30.6 2.3 16 1-16 33-48 (365)
320 1ukz_A Uridylate kinase; trans 40.7 11 0.00038 27.7 1.6 13 1-13 25-37 (203)
321 1in4_A RUVB, holliday junction 40.7 11 0.00036 30.6 1.6 14 1-14 61-74 (334)
322 1nn5_A Similar to deoxythymidy 40.6 11 0.00038 27.8 1.6 21 1-23 19-39 (215)
323 3trf_A Shikimate kinase, SK; a 40.4 11 0.00039 27.1 1.6 13 1-13 15-27 (185)
324 1pzn_A RAD51, DNA repair and r 40.3 12 0.00042 30.6 1.9 15 1-15 141-155 (349)
325 1zuh_A Shikimate kinase; alpha 40.2 12 0.00039 26.7 1.6 12 1-12 17-28 (168)
326 1y63_A LMAJ004144AAA protein; 40.1 11 0.00039 27.3 1.6 13 1-13 20-32 (184)
327 2ze6_A Isopentenyl transferase 40.1 11 0.00038 29.2 1.6 13 1-13 11-23 (253)
328 2cdn_A Adenylate kinase; phosp 40.0 11 0.00039 27.6 1.6 13 1-13 30-42 (201)
329 1aky_A Adenylate kinase; ATP:A 40.0 11 0.00039 28.2 1.6 13 1-13 14-26 (220)
330 3lda_A DNA repair protein RAD5 39.6 13 0.00043 31.3 1.9 17 1-17 188-204 (400)
331 2grj_A Dephospho-COA kinase; T 39.4 12 0.00041 27.9 1.6 13 1-13 22-34 (192)
332 3b5x_A Lipid A export ATP-bind 38.9 11 0.00037 33.3 1.5 12 1-12 379-390 (582)
333 2qp9_X Vacuolar protein sortin 38.8 45 0.0015 27.1 5.2 14 1-14 94-107 (355)
334 3lxw_A GTPase IMAP family memb 38.6 34 0.0012 26.2 4.2 27 52-78 89-115 (247)
335 3fb4_A Adenylate kinase; psych 38.5 12 0.00042 27.7 1.6 13 1-13 10-22 (216)
336 2iw3_A Elongation factor 3A; a 38.5 11 0.00039 35.6 1.6 12 1-12 471-482 (986)
337 3a4m_A L-seryl-tRNA(SEC) kinas 38.5 12 0.00042 29.0 1.6 22 1-24 14-35 (260)
338 2p5t_B PEZT; postsegregational 38.2 10 0.00035 29.4 1.1 13 1-13 42-54 (253)
339 2ce2_X GTPase HRAS; signaling 38.1 13 0.00045 25.6 1.6 12 1-12 13-24 (166)
340 4ag6_A VIRB4 ATPase, type IV s 37.6 16 0.00055 30.2 2.3 16 1-16 45-60 (392)
341 1z2a_A RAS-related protein RAB 37.6 14 0.00046 25.8 1.6 12 1-12 15-26 (168)
342 1e4v_A Adenylate kinase; trans 37.5 13 0.00045 27.7 1.6 13 1-13 10-22 (214)
343 3b60_A Lipid A export ATP-bind 37.5 10 0.00035 33.5 1.1 11 1-11 379-389 (582)
344 2yl4_A ATP-binding cassette SU 37.4 10 0.00035 33.6 1.1 12 1-12 380-391 (595)
345 2wjg_A FEOB, ferrous iron tran 37.2 14 0.00047 26.5 1.6 12 1-12 17-28 (188)
346 1d2n_A N-ethylmaleimide-sensit 37.2 86 0.0029 24.0 6.4 14 1-14 74-87 (272)
347 4aby_A DNA repair protein RECN 37.1 6.6 0.00022 32.8 -0.2 15 1-15 70-84 (415)
348 1gvn_B Zeta; postsegregational 37.1 13 0.00045 29.5 1.6 13 1-13 43-55 (287)
349 3ake_A Cytidylate kinase; CMP 36.9 14 0.00047 27.1 1.6 13 1-13 12-24 (208)
350 3eph_A TRNA isopentenyltransfe 36.7 69 0.0024 27.0 6.0 78 1-83 12-104 (409)
351 3a8t_A Adenylate isopentenyltr 36.6 40 0.0014 27.7 4.4 72 1-79 50-138 (339)
352 1c9k_A COBU, adenosylcobinamid 36.5 14 0.00049 27.3 1.6 28 121-148 129-156 (180)
353 3dl0_A Adenylate kinase; phosp 36.5 14 0.00048 27.5 1.6 12 1-12 10-21 (216)
354 1zak_A Adenylate kinase; ATP:A 36.2 14 0.00049 27.7 1.6 13 1-13 15-27 (222)
355 2xb4_A Adenylate kinase; ATP-b 36.0 14 0.00049 27.8 1.6 13 1-13 10-22 (223)
356 2ce7_A Cell division protein F 35.9 74 0.0025 27.3 6.2 13 1-13 59-71 (476)
357 1svm_A Large T antigen; AAA+ f 35.9 14 0.00048 30.8 1.6 13 1-13 179-191 (377)
358 2rcn_A Probable GTPase ENGC; Y 35.7 14 0.00048 30.6 1.6 12 1-12 225-236 (358)
359 3qkt_A DNA double-strand break 35.4 19 0.00064 29.3 2.3 16 1-16 33-48 (339)
360 1u8z_A RAS-related protein RAL 35.1 16 0.00053 25.3 1.6 12 1-12 14-25 (168)
361 3nwj_A ATSK2; P loop, shikimat 35.1 15 0.00051 28.6 1.6 13 1-13 58-70 (250)
362 3qf4_B Uncharacterized ABC tra 35.1 12 0.00041 33.2 1.1 12 1-12 391-402 (598)
363 1uj2_A Uridine-cytidine kinase 34.9 15 0.00052 28.3 1.6 12 1-12 32-43 (252)
364 3be4_A Adenylate kinase; malar 34.8 15 0.00053 27.4 1.6 14 1-14 15-28 (217)
365 2qtf_A Protein HFLX, GTP-bindi 34.7 35 0.0012 28.1 3.9 13 1-13 189-201 (364)
366 1ltq_A Polynucleotide kinase; 34.6 15 0.00052 28.9 1.6 13 1-13 12-24 (301)
367 1chd_A CHEB methylesterase; ch 34.5 20 0.00067 27.2 2.1 27 163-189 169-195 (203)
368 2o5v_A DNA replication and rep 34.4 20 0.00067 29.7 2.3 15 1-15 36-50 (359)
369 3exa_A TRNA delta(2)-isopenten 34.3 26 0.00087 28.6 2.9 75 1-80 13-102 (322)
370 1pui_A ENGB, probable GTP-bind 33.8 8.2 0.00028 28.4 -0.1 12 1-12 36-47 (210)
371 3dm5_A SRP54, signal recogniti 33.8 54 0.0019 27.9 5.0 22 1-24 110-131 (443)
372 1e69_A Chromosome segregation 33.8 17 0.00057 29.3 1.7 14 1-14 34-47 (322)
373 2qag_C Septin-7; cell cycle, c 33.8 13 0.00044 31.5 1.1 12 1-12 41-52 (418)
374 1lv7_A FTSH; alpha/beta domain 33.4 17 0.00057 27.9 1.6 14 1-14 55-68 (257)
375 2erx_A GTP-binding protein DI- 33.2 17 0.0006 25.2 1.6 12 1-12 13-24 (172)
376 1c1y_A RAS-related protein RAP 33.1 18 0.0006 25.1 1.6 12 1-12 13-24 (167)
377 2ged_A SR-beta, signal recogni 33.0 17 0.0006 26.1 1.6 13 1-13 58-70 (193)
378 3r20_A Cytidylate kinase; stru 33.0 17 0.00059 28.0 1.6 13 1-13 19-31 (233)
379 2w58_A DNAI, primosome compone 32.9 17 0.0006 26.6 1.6 15 1-15 64-78 (202)
380 1z0j_A RAB-22, RAS-related pro 32.8 18 0.00061 25.1 1.6 12 1-12 16-27 (170)
381 1ak2_A Adenylate kinase isoenz 32.6 17 0.0006 27.5 1.6 14 1-14 26-39 (233)
382 3bos_A Putative DNA replicatio 32.3 18 0.00061 27.0 1.6 16 1-16 62-77 (242)
383 1ky3_A GTP-binding protein YPT 32.3 18 0.00063 25.4 1.6 12 1-12 18-29 (182)
384 1on3_A Methylmalonyl-COA carbo 32.2 2.5E+02 0.0086 24.4 11.9 44 147-192 204-255 (523)
385 2f6r_A COA synthase, bifunctio 32.2 18 0.0006 28.6 1.6 12 1-12 85-96 (281)
386 3m6a_A ATP-dependent protease 32.1 26 0.00091 30.6 2.8 15 1-15 118-132 (543)
387 4hlc_A DTMP kinase, thymidylat 32.0 18 0.00063 27.1 1.6 13 1-13 12-24 (205)
388 3cf2_A TER ATPase, transitiona 32.0 1.6E+02 0.0054 27.2 8.0 63 1-83 248-310 (806)
389 1w1w_A Structural maintenance 32.0 20 0.00067 30.2 1.9 15 1-15 36-50 (430)
390 2wji_A Ferrous iron transport 32.0 19 0.00064 25.3 1.6 12 1-12 13-24 (165)
391 3sft_A CHEB, chemotaxis respon 31.9 29 0.00098 26.0 2.6 25 163-187 167-191 (193)
392 3fxd_A Protein ICMQ; helix bun 31.9 18 0.00061 21.3 1.1 12 4-15 28-39 (57)
393 1ek0_A Protein (GTP-binding pr 31.8 19 0.00065 24.9 1.6 12 1-12 13-24 (170)
394 3con_A GTPase NRAS; structural 31.7 19 0.00065 25.8 1.6 13 1-13 31-43 (190)
395 1kao_A RAP2A; GTP-binding prot 31.7 18 0.00062 24.9 1.5 12 1-12 13-24 (167)
396 1z08_A RAS-related protein RAB 31.6 19 0.00066 25.0 1.6 12 1-12 16-27 (170)
397 2zej_A Dardarin, leucine-rich 31.5 18 0.00061 26.0 1.4 12 1-12 12-23 (184)
398 1svi_A GTP-binding protein YSX 31.5 19 0.00065 25.9 1.6 14 1-14 33-46 (195)
399 3ney_A 55 kDa erythrocyte memb 31.5 19 0.00065 27.0 1.6 25 169-193 164-188 (197)
400 2px0_A Flagellar biosynthesis 31.4 23 0.00077 28.3 2.1 29 1-30 115-146 (296)
401 2gj8_A MNME, tRNA modification 31.3 19 0.00067 25.6 1.6 12 1-12 14-25 (172)
402 1q3t_A Cytidylate kinase; nucl 31.2 19 0.00066 27.3 1.6 13 1-13 26-38 (236)
403 2fn4_A P23, RAS-related protei 31.2 20 0.00067 25.2 1.6 13 1-13 19-31 (181)
404 1z0f_A RAB14, member RAS oncog 31.2 19 0.00064 25.3 1.5 12 2-13 26-37 (179)
405 4b4t_K 26S protease regulatory 31.1 1.4E+02 0.0049 25.1 7.2 61 1-81 216-276 (428)
406 4eaq_A DTMP kinase, thymidylat 31.1 19 0.00066 27.4 1.6 14 1-14 36-49 (229)
407 1wms_A RAB-9, RAB9, RAS-relate 31.0 20 0.00068 25.2 1.6 12 1-12 17-28 (177)
408 1g16_A RAS-related protein SEC 30.9 20 0.00069 24.9 1.6 12 1-12 13-24 (170)
409 3cmw_A Protein RECA, recombina 30.9 2.1E+02 0.0071 29.0 9.1 73 1-84 393-475 (1706)
410 2zts_A Putative uncharacterize 30.8 31 0.001 25.9 2.8 19 1-19 40-58 (251)
411 1vma_A Cell division protein F 30.7 24 0.0008 28.4 2.1 20 1-22 114-133 (306)
412 1ypw_A Transitional endoplasmi 30.6 59 0.002 29.9 5.0 62 1-82 248-309 (806)
413 1a7j_A Phosphoribulokinase; tr 30.5 15 0.00051 29.3 0.9 13 1-13 15-27 (290)
414 3u9r_B MCC beta, methylcrotony 30.3 2.8E+02 0.0096 24.3 12.4 37 156-192 242-286 (555)
415 3hjn_A DTMP kinase, thymidylat 30.2 21 0.00071 26.6 1.6 22 1-24 10-31 (197)
416 1lm5_A Subdomain of desmoplaki 30.0 17 0.00057 27.8 1.0 21 156-176 56-76 (214)
417 1r2q_A RAS-related protein RAB 30.0 21 0.00073 24.7 1.6 12 1-12 16-27 (170)
418 3cr8_A Sulfate adenylyltranfer 29.9 14 0.00048 32.5 0.7 14 1-14 379-392 (552)
419 2efe_B Small GTP-binding prote 29.7 21 0.00073 25.1 1.6 12 1-12 22-33 (181)
420 3auy_A DNA double-strand break 29.5 26 0.0009 28.7 2.3 16 1-16 35-50 (371)
421 3q72_A GTP-binding protein RAD 29.4 21 0.0007 24.8 1.4 11 1-11 12-22 (166)
422 2lkc_A Translation initiation 29.4 22 0.00074 25.0 1.6 12 1-12 18-29 (178)
423 2www_A Methylmalonic aciduria 29.3 21 0.00072 29.2 1.6 13 1-13 84-96 (349)
424 2a9k_A RAS-related protein RAL 29.2 22 0.00076 25.1 1.6 12 1-12 28-39 (187)
425 3cmu_A Protein RECA, recombina 29.0 35 0.0012 35.0 3.3 75 1-85 44-127 (2050)
426 1q1a_A HST2 protein; ternary c 28.9 38 0.0013 26.9 3.1 33 54-86 4-36 (289)
427 3lxx_A GTPase IMAP family memb 28.9 22 0.00075 26.9 1.6 12 1-12 39-50 (239)
428 2cxx_A Probable GTP-binding pr 28.8 23 0.00078 25.2 1.6 12 1-12 11-22 (190)
429 3pqc_A Probable GTP-binding pr 28.7 23 0.00078 25.3 1.6 12 1-12 33-44 (195)
430 1r6b_X CLPA protein; AAA+, N-t 28.7 1.9E+02 0.0064 26.1 8.0 79 1-87 217-295 (758)
431 2zan_A Vacuolar protein sortin 28.7 68 0.0023 27.0 4.8 14 1-14 177-190 (444)
432 3tw8_B RAS-related protein RAB 28.5 22 0.00074 25.0 1.4 12 1-12 19-30 (181)
433 3tlx_A Adenylate kinase 2; str 28.4 23 0.00078 27.2 1.6 13 1-13 39-51 (243)
434 1p6x_A Thymidine kinase; P-loo 28.4 22 0.00076 29.1 1.6 12 1-12 17-28 (334)
435 2y8e_A RAB-protein 6, GH09086P 28.2 24 0.00081 24.7 1.6 12 1-12 24-35 (179)
436 3q85_A GTP-binding protein REM 28.1 24 0.00082 24.5 1.6 12 1-12 12-23 (169)
437 3clv_A RAB5 protein, putative; 28.1 22 0.00077 25.4 1.5 11 2-12 18-28 (208)
438 1tf7_A KAIC; homohexamer, hexa 27.9 22 0.00076 30.8 1.6 15 1-15 291-305 (525)
439 4b4t_M 26S protease regulatory 27.8 1.6E+02 0.0054 24.9 6.9 63 1-83 225-287 (434)
440 1upt_A ARL1, ADP-ribosylation 27.8 25 0.00084 24.5 1.6 12 1-12 17-28 (171)
441 3foz_A TRNA delta(2)-isopenten 27.4 42 0.0014 27.3 3.0 29 51-80 81-109 (316)
442 2iw3_A Elongation factor 3A; a 27.3 14 0.00047 35.0 0.2 18 1-26 709-726 (986)
443 1njg_A DNA polymerase III subu 27.3 25 0.00084 25.9 1.6 15 1-15 55-69 (250)
444 4dsu_A GTPase KRAS, isoform 2B 27.2 25 0.00086 24.9 1.6 12 1-12 14-25 (189)
445 2bme_A RAB4A, RAS-related prot 27.0 26 0.00088 24.9 1.6 12 1-12 20-31 (186)
446 4a82_A Cystic fibrosis transme 26.9 13 0.00044 32.8 -0.1 11 1-11 377-387 (578)
447 1yrb_A ATP(GTP)binding protein 26.9 30 0.001 26.3 2.1 21 1-24 24-44 (262)
448 3qf4_A ABC transporter, ATP-bi 26.9 13 0.00046 32.8 0.0 12 1-12 379-390 (587)
449 2nzj_A GTP-binding protein REM 26.8 26 0.00089 24.4 1.6 12 1-12 14-25 (175)
450 1t9h_A YLOQ, probable GTPase E 26.7 16 0.00053 29.6 0.4 11 2-12 184-194 (307)
451 1udx_A The GTP-binding protein 26.7 20 0.00069 30.3 1.1 11 2-12 168-178 (416)
452 3bc1_A RAS-related protein RAB 26.7 26 0.00089 24.9 1.6 12 1-12 21-32 (195)
453 1ma3_A SIR2-AF2, transcription 26.7 43 0.0015 26.1 2.9 29 56-86 3-31 (253)
454 1l8q_A Chromosomal replication 26.6 25 0.00085 28.0 1.6 15 1-15 47-61 (324)
455 3hu3_A Transitional endoplasmi 26.4 93 0.0032 26.7 5.3 61 1-81 248-308 (489)
456 3kkq_A RAS-related protein M-R 26.4 25 0.00087 24.9 1.5 12 1-12 28-39 (183)
457 2g6b_A RAS-related protein RAB 26.4 27 0.00092 24.5 1.6 12 1-12 20-31 (180)
458 4aez_B MAD2, mitotic spindle c 26.3 61 0.0021 24.4 3.6 50 10-60 24-73 (203)
459 1e2k_A Thymidine kinase; trans 26.2 24 0.00082 28.8 1.4 13 1-13 14-26 (331)
460 2hxs_A RAB-26, RAS-related pro 26.1 27 0.00094 24.4 1.6 13 1-13 16-28 (178)
461 3llm_A ATP-dependent RNA helic 26.0 40 0.0014 25.4 2.6 18 1-18 86-103 (235)
462 2wsm_A Hydrogenase expression/ 25.9 27 0.00092 25.8 1.6 14 1-14 40-53 (221)
463 2fg5_A RAB-22B, RAS-related pr 25.8 28 0.00094 25.1 1.6 12 1-12 33-44 (192)
464 3dci_A Arylesterase; SGNH_hydr 25.6 1.1E+02 0.0036 22.7 5.0 46 33-78 101-155 (232)
465 2bov_A RAla, RAS-related prote 25.6 28 0.00095 25.1 1.6 12 1-12 24-35 (206)
466 2h17_A ADP-ribosylation factor 25.5 27 0.00092 24.8 1.5 13 1-13 31-43 (181)
467 2oil_A CATX-8, RAS-related pro 25.4 27 0.00092 25.1 1.5 12 2-13 36-47 (193)
468 1r8s_A ADP-ribosylation factor 25.4 29 0.00099 23.9 1.6 13 1-13 10-22 (164)
469 3tkl_A RAS-related protein RAB 25.4 28 0.00097 24.9 1.6 12 1-12 26-37 (196)
470 1vg8_A RAS-related protein RAB 25.2 29 0.00098 25.1 1.6 12 1-12 18-29 (207)
471 3dz8_A RAS-related protein RAB 25.1 28 0.00094 25.0 1.5 11 2-12 34-44 (191)
472 1mh1_A RAC1; GTP-binding, GTPa 25.0 29 0.001 24.4 1.6 12 1-12 15-26 (186)
473 1of1_A Thymidine kinase; trans 24.8 28 0.00096 29.0 1.6 13 1-13 59-71 (376)
474 1sxj_E Activator 1 40 kDa subu 24.8 23 0.00079 28.5 1.1 15 1-15 46-60 (354)
475 4dzz_A Plasmid partitioning pr 24.7 48 0.0017 24.0 2.8 22 1-24 12-33 (206)
476 1zu4_A FTSY; GTPase, signal re 24.6 35 0.0012 27.6 2.1 21 1-23 115-135 (320)
477 3glr_A NAD-dependent deacetyla 24.6 48 0.0017 26.4 2.9 29 58-86 11-39 (285)
478 3t5g_A GTP-binding protein RHE 24.5 30 0.001 24.4 1.6 12 1-12 16-27 (181)
479 1p5z_B DCK, deoxycytidine kina 24.4 20 0.00067 27.7 0.6 12 1-12 34-45 (263)
480 2gf9_A RAS-related protein RAB 24.3 31 0.001 24.7 1.6 12 1-12 32-43 (189)
481 2hf9_A Probable hydrogenase ni 24.3 30 0.001 25.6 1.6 14 1-14 48-61 (226)
482 1z06_A RAS-related protein RAB 24.3 31 0.0011 24.7 1.6 12 1-12 30-41 (189)
483 1m7b_A RND3/RHOE small GTP-bin 24.2 31 0.0011 24.6 1.6 12 1-12 17-28 (184)
484 3cmw_A Protein RECA, recombina 24.2 74 0.0025 32.1 4.6 74 1-84 44-126 (1706)
485 3oes_A GTPase rhebl1; small GT 24.1 31 0.0011 25.0 1.6 12 1-12 34-45 (201)
486 1ls1_A Signal recognition part 24.1 36 0.0012 27.1 2.1 22 1-24 108-129 (295)
487 2il1_A RAB12; G-protein, GDP, 23.9 29 0.001 25.0 1.4 14 1-14 36-49 (192)
488 1nrj_B SR-beta, signal recogni 23.8 31 0.0011 25.3 1.6 13 1-13 22-34 (218)
489 1moz_A ARL1, ADP-ribosylation 23.8 24 0.00082 24.9 0.9 12 1-12 28-39 (183)
490 2gf0_A GTP-binding protein DI- 23.8 32 0.0011 24.7 1.6 13 1-13 18-30 (199)
491 2r62_A Cell division protease 23.8 31 0.0011 26.4 1.6 14 1-14 54-67 (268)
492 3bwd_D RAC-like GTP-binding pr 23.7 32 0.0011 24.2 1.6 12 1-12 18-29 (182)
493 2elf_A Protein translation elo 23.5 40 0.0014 27.8 2.3 61 2-77 32-92 (370)
494 3ihw_A Centg3; RAS, centaurin, 23.4 33 0.0011 24.6 1.6 12 1-12 30-41 (184)
495 1ksh_A ARF-like protein 2; sma 23.3 29 0.001 24.6 1.3 11 2-12 29-39 (186)
496 1zj6_A ADP-ribosylation factor 23.3 33 0.0011 24.4 1.6 12 1-12 26-37 (187)
497 3ux8_A Excinuclease ABC, A sub 23.0 17 0.00057 32.7 -0.1 13 1-13 358-370 (670)
498 3t1o_A Gliding protein MGLA; G 23.0 32 0.0011 24.5 1.5 10 2-11 25-34 (198)
499 1x0u_A Hypothetical methylmalo 22.9 3.7E+02 0.013 23.3 11.9 45 147-193 202-254 (522)
500 2o52_A RAS-related protein RAB 22.9 32 0.0011 25.0 1.5 12 2-13 36-47 (200)
No 1
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=1.7e-38 Score=260.33 Aligned_cols=190 Identities=15% Similarity=0.163 Sum_probs=166.3
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcch--------hhhh
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPG--------ERLD 97 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~--------~~~~ 97 (223)
+...+++.|+| ...+|+|+..|..+..|+.||.++++.+++|+++++||++|.|++||+|.|+.... +...
T Consensus 15 e~il~~~~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~ 94 (274)
T 4fzw_C 15 EFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLGM 94 (274)
T ss_dssp -CEEEEEETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHHH
T ss_pred ccEEEEEECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHHH
Confidence 45567788999 88899999999999999999999999999999999999999999999998886421 1222
Q ss_pred HHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHH
Q psy7339 98 HYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASE 153 (223)
Q Consensus 98 ~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 153 (223)
.+.+.++.+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++
T Consensus 95 ~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 174 (274)
T 4fzw_C 95 SVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARAMG 174 (274)
T ss_dssp HHHHTHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHHHH
Confidence 3344444444444 39999997 79999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 154 LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 154 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
++++|++++|+||+++||||+|||++++++++.+++++++..||.+++.+|++++......++
T Consensus 175 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 237 (274)
T 4fzw_C 175 LALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLD 237 (274)
T ss_dssp HHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTSSCHH
T ss_pred HHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhCCHH
Confidence 999999999999999999999999999999999999999999999999999999987655544
No 2
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=100.00 E-value=3.3e-38 Score=256.23 Aligned_cols=186 Identities=21% Similarity=0.228 Sum_probs=163.1
Q ss_pred eccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh---hhHHHHhHHHH
Q psy7339 31 FRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER---LDHYARTTEQV 106 (223)
Q Consensus 31 ~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~---~~~~~~~~~~~ 106 (223)
++.-|+| ...+|+|+..|..+..|+.||.++++.+++|+++++||++|.|++||+|.|+...... ...+.+..+.+
T Consensus 4 ~E~~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 83 (254)
T 3hrx_A 4 KERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRV 83 (254)
T ss_dssp EEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHH
T ss_pred EEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchhhHHHHHHHHHH
Confidence 4556889 8889999999999999999999999999999999999999999999999888653221 12222233333
Q ss_pred hhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCCC
Q psy7339 107 KNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLN 162 (223)
Q Consensus 107 ~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~ 162 (223)
...+ .+|+|+|| ++++|++||+++|++|++|++++|++++|+++|+++++||++|+
T Consensus 84 ~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltg~~i~ 163 (254)
T 3hrx_A 84 VEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLS 163 (254)
T ss_dssp HHHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEE
T ss_pred HHHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhhcCcccC
Confidence 3333 39999997 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 163 AQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 163 a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
|+||+++||||+|||++++++++.+++++|+..||.+++.+|+.+++.....++
T Consensus 164 A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~ 217 (254)
T 3hrx_A 164 AEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYALTKKLLLETYRLSLT 217 (254)
T ss_dssp HHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHH
T ss_pred HHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999987665544
No 3
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=3.1e-38 Score=256.71 Aligned_cols=188 Identities=17% Similarity=0.143 Sum_probs=164.1
Q ss_pred ceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh--hhhHHHHhHHH
Q psy7339 29 AEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE--RLDHYARTTEQ 105 (223)
Q Consensus 29 ~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~--~~~~~~~~~~~ 105 (223)
..++.-|+| +..+|+|+..|..+..|+.||.++++.++.|+++++||++|.|++||+|.|+..... ....+......
T Consensus 7 l~ve~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~ 86 (258)
T 4fzw_A 7 LIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAATLNDTRPQ 86 (258)
T ss_dssp EEEEEETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHHHHTCSHHH
T ss_pred EEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhhHHHhHHHH
Confidence 456778999 889999999999999999999999999999999999999999999999988854211 11122222233
Q ss_pred Hhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCC
Q psy7339 106 VKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKL 161 (223)
Q Consensus 106 ~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~ 161 (223)
+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|+++
T Consensus 87 ~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~llltg~~i 166 (258)
T 4fzw_A 87 LWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESI 166 (258)
T ss_dssp HHHHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred HHHHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHHHcCCcC
Confidence 33333 39999997 7999999999999999999999999999999999999999999
Q ss_pred CHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 162 NAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 162 ~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
+|+||+++||||+|||++++++++.+++++|+..||.+++.+|+.+++.....++
T Consensus 167 ~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~ 221 (258)
T 4fzw_A 167 TAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQ 221 (258)
T ss_dssp EHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHH
T ss_pred cHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHH
Confidence 9999999999999999999999999999999999999999999999987665543
No 4
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=100.00 E-value=9.6e-37 Score=247.62 Aligned_cols=187 Identities=16% Similarity=0.176 Sum_probs=163.8
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHH
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQV 106 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~ 106 (223)
...++..|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+..... ..+...+..+
T Consensus 7 ~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~--~~~~~~~~~~ 84 (255)
T 3p5m_A 7 GISVEHDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDT--AGAADAANRV 84 (255)
T ss_dssp TEEEEEETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CH--HHHHHHHHHH
T ss_pred eEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcc--hHHHHHHHHH
Confidence 4667778899 888899999999999999999999999999999999999999999999988875432 1333333344
Q ss_pred hhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCCC
Q psy7339 107 KNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLN 162 (223)
Q Consensus 107 ~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~ 162 (223)
...+ .+++|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|++++
T Consensus 85 ~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~ 164 (255)
T 3p5m_A 85 VRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKIS 164 (255)
T ss_dssp HHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHHHHHCCCEE
T ss_pred HHHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHcCCCcC
Confidence 3334 39999997 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 163 AQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 163 a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++
T Consensus 165 a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 218 (255)
T 3p5m_A 165 AATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFGWTKRALAAATLAELE 218 (255)
T ss_dssp HHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHCTTHH
T ss_pred HHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHH
Confidence 999999999999999999999999999999999999999999999987655443
No 5
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=100.00 E-value=7.9e-37 Score=248.89 Aligned_cols=186 Identities=19% Similarity=0.231 Sum_probs=163.3
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh-----hhhHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE-----RLDHYA 100 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~-----~~~~~~ 100 (223)
+...++..|+| +..+++|+. |..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+..... ....+.
T Consensus 6 ~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 84 (261)
T 3pea_A 6 KFLSVRVEDHIAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATELA 84 (261)
T ss_dssp SSEEEEEETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHHH
T ss_pred cceEEEEECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHHH
Confidence 45667788899 888899988 99999999999999999999999999999999999999988865322 122333
Q ss_pred HhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHH
Q psy7339 101 RTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLY 156 (223)
Q Consensus 101 ~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l 156 (223)
...+.+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|+++++
T Consensus 85 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l~l 164 (261)
T 3pea_A 85 QLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEMML 164 (261)
T ss_dssp HHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHH
Confidence 3333333333 49999997 79999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhc
Q psy7339 157 TGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRD 213 (223)
Q Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~ 213 (223)
+|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|++++.....
T Consensus 165 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~ 221 (261)
T 3pea_A 165 TSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATARAVLELLQTTKSS 221 (261)
T ss_dssp HCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHGGGCCH
T ss_pred cCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999876443
No 6
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=100.00 E-value=1.2e-36 Score=247.02 Aligned_cols=186 Identities=21% Similarity=0.228 Sum_probs=161.9
Q ss_pred eccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh---hhHHHHhHHHH
Q psy7339 31 FRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER---LDHYARTTEQV 106 (223)
Q Consensus 31 ~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~---~~~~~~~~~~~ 106 (223)
++.-|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+...... ...+...++.+
T Consensus 4 ~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 83 (254)
T 3gow_A 4 KERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYNRV 83 (254)
T ss_dssp EEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHHHH
T ss_pred EEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhcchhHHHHHHHHHHH
Confidence 4556788 8888999999999999999999999999999999999999999999999888653211 11222223333
Q ss_pred hhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCCC
Q psy7339 107 KNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLN 162 (223)
Q Consensus 107 ~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~ 162 (223)
...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|++++
T Consensus 84 ~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~ 163 (254)
T 3gow_A 84 VEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLS 163 (254)
T ss_dssp HHHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCCEE
T ss_pred HHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCccC
Confidence 3333 39999997 79999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 163 AQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 163 a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
|+||+++||||+|+|++++++++.+++++|+..||.+++.+|++++......++
T Consensus 164 a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 217 (254)
T 3gow_A 164 AEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYALTKKLLLETYRLSLT 217 (254)
T ss_dssp HHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHH
T ss_pred HHHHHHcCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhCCHH
Confidence 999999999999999999999999999999999999999999999987655443
No 7
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=100.00 E-value=1.8e-36 Score=249.09 Aligned_cols=189 Identities=17% Similarity=0.139 Sum_probs=165.4
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh--------hhH
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER--------LDH 98 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~--------~~~ 98 (223)
...++..|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+...... ...
T Consensus 18 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 97 (279)
T 3g64_A 18 HLRVEITDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARLLD 97 (279)
T ss_dssp SEEEEEETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHHHH
T ss_pred eEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhHHHH
Confidence 4667778899 8888999999999999999999999999999999999999999999999998764221 112
Q ss_pred HHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccC-CCCccccchhhhcCHHHHHH
Q psy7339 99 YARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMT-PEGCSSVLFPRIFGNSVASE 153 (223)
Q Consensus 99 ~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~-p~~g~~~~l~~~vg~~~a~~ 153 (223)
+.+....+...+ .+++|+|+ ++++|++||+++|++ |++|++++|++++|+.+|++
T Consensus 98 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~~A~~ 177 (279)
T 3g64_A 98 FNRMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHATR 177 (279)
T ss_dssp HHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHHHHHH
Confidence 333333343334 39999997 799999999999999 99999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 154 LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 154 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
++++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......++
T Consensus 178 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 240 (279)
T 3g64_A 178 LLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHAQTKALLTAELDMPLA 240 (279)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHH
Confidence 999999999999999999999999999999999999999999999999999999987654443
No 8
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=100.00 E-value=1.2e-36 Score=248.31 Aligned_cols=190 Identities=19% Similarity=0.199 Sum_probs=165.8
Q ss_pred Ccceec-cccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC-CCcCCCCCCCcch----hhhhHH
Q psy7339 27 SLAEFR-LADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC-RAGIEPPPSCLPG----ERLDHY 99 (223)
Q Consensus 27 ~~~~~~-~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g-~~F~aG~~~~~~~----~~~~~~ 99 (223)
+...++ .-|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.| +.||+|.|+.... .....+
T Consensus 8 ~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~ 87 (265)
T 3kqf_A 8 QNISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQVRHA 87 (265)
T ss_dssp CSEEEECCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHHHHH
T ss_pred CeEEEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCHHHHHHH
Confidence 456677 77889 8889999999999999999999999999999999999999999 9999998875421 122233
Q ss_pred HHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHH
Q psy7339 100 ARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELL 155 (223)
Q Consensus 100 ~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ 155 (223)
......+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++
T Consensus 88 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ 167 (265)
T 3kqf_A 88 VSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELI 167 (265)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHHHHHHHH
Confidence 33334444444 39999997 7999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 156 YTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 156 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....++
T Consensus 168 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~ 228 (265)
T 3kqf_A 168 YTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQVDLH 228 (265)
T ss_dssp HHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHH
Confidence 9999999999999999999999999999999999999999999999999999987655443
No 9
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=100.00 E-value=2.9e-36 Score=246.27 Aligned_cols=190 Identities=11% Similarity=0.020 Sum_probs=164.2
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh-------hhH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER-------LDH 98 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~-------~~~ 98 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+...... ...
T Consensus 4 ~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (268)
T 3i47_A 4 SDLLYEIQDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLE 83 (268)
T ss_dssp CSEEEEEETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHHHH
T ss_pred CEEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHHHHHH
Confidence 34567778899 8889999999999999999999999999999999999999999999999988643211 111
Q ss_pred HHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHH
Q psy7339 99 YARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASEL 154 (223)
Q Consensus 99 ~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l 154 (223)
+......+...+ .+|+|+|+ ++++|++||+++|++|++|++ ++++++|+.+|+++
T Consensus 84 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~A~~l 162 (268)
T 3i47_A 84 DSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGERAAKML 162 (268)
T ss_dssp HHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHHHHHHH
Confidence 122223333333 49999997 799999999999999999887 89999999999999
Q ss_pred HHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcCc
Q psy7339 155 LYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHAT 217 (223)
Q Consensus 155 ~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~ 217 (223)
+++|++++|+||+++||||+|+|++++++++.++|++|+..||.+++.+|++++......+++
T Consensus 163 lltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~ 225 (268)
T 3i47_A 163 FMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAVKNSKQLAQYVANKKIDE 225 (268)
T ss_dssp HHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCCSH
T ss_pred HHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCChhH
Confidence 999999999999999999999999999999999999999999999999999999887666554
No 10
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=100.00 E-value=1.2e-36 Score=249.28 Aligned_cols=189 Identities=13% Similarity=0.142 Sum_probs=164.7
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcch----hhhhHHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPG----ERLDHYAR 101 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~----~~~~~~~~ 101 (223)
+...++.-|+| +..+++|+. |..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+.... .....+..
T Consensus 24 ~~v~~~~~~~Va~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~ 102 (277)
T 4di1_A 24 EFVSVVADQGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEADTAAR 102 (277)
T ss_dssp CSEEEEEETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCHHHHHHHHH
T ss_pred ceEEEEEECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccChHHHHHHHH
Confidence 45667788999 888899988 9999999999999999999999999999999999999998875422 11222333
Q ss_pred hHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHc
Q psy7339 102 TTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYT 157 (223)
Q Consensus 102 ~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~ 157 (223)
.+..+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++
T Consensus 103 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lllt 182 (277)
T 4di1_A 103 VRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFS 182 (277)
T ss_dssp HHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHHc
Confidence 333333333 39999997 799999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 158 GRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 158 g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++
T Consensus 183 G~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 241 (277)
T 4di1_A 183 GRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALAAAKAVINDVFELEAT 241 (277)
T ss_dssp CCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHHHHHHHHHHHHHTTTSCHH
T ss_pred CCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHH
Confidence 99999999999999999999999999999999999999999999999999987554443
No 11
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=100.00 E-value=8.4e-37 Score=252.83 Aligned_cols=191 Identities=19% Similarity=0.178 Sum_probs=158.0
Q ss_pred Ccceecccc-ce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh---h------
Q psy7339 27 SLAEFRLAD-HI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE---R------ 95 (223)
Q Consensus 27 ~~~~~~~~d-~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~---~------ 95 (223)
+...++..| +| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+..... .
T Consensus 29 ~~v~~~~~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 108 (298)
T 3qre_A 29 DAVLYEATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTMAK 108 (298)
T ss_dssp CSEEEEECTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-----------------
T ss_pred CeEEEEEeCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccccccccc
Confidence 456677788 89 888999999999999999999999999999999999999999999999988865332 1
Q ss_pred ---hhHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCH
Q psy7339 96 ---LDHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGN 148 (223)
Q Consensus 96 ---~~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~ 148 (223)
...+......+...+ .+++|+|| ++++|++||+++|++|++|++++|++++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~ 188 (298)
T 3qre_A 109 AKDANLADLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSW 188 (298)
T ss_dssp ------------CCTTGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHHSCH
T ss_pred chhHHHHHHHHHHHHHHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHhcCH
Confidence 011122222333333 49999997 799999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhc-chHHHHHHHHHHHhHHhcCcCc
Q psy7339 149 SVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKL-SSCIVSLLAHLMRGILRDGHAT 217 (223)
Q Consensus 149 ~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~-~~~a~~~~K~~l~~~~~~~~~~ 217 (223)
.+|++++++|++++|+||+++||||+|+|++++++++.++|++|+.. ||.+++.+|+++++.....++.
T Consensus 189 ~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~p~a~~~~K~~l~~~~~~~l~~ 258 (298)
T 3qre_A 189 AVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMAVIKRQVYGDATRDVVE 258 (298)
T ss_dssp HHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGGC----
T ss_pred HHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHhhhcCCHHH
Confidence 99999999999999999999999999999999999999999999998 9999999999999876655543
No 12
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=4.5e-36 Score=244.05 Aligned_cols=189 Identities=16% Similarity=0.226 Sum_probs=160.8
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh--hhHHHH-hH
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER--LDHYAR-TT 103 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~--~~~~~~-~~ 103 (223)
...++.-|+| +..+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+...... .+.+.+ ..
T Consensus 4 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 83 (257)
T 2ej5_A 4 TIRYEVKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGDVLRSRY 83 (257)
T ss_dssp SEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHHHHHHHTH
T ss_pred ceEEEeECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchhHHHHHHH
Confidence 3456667888 7888999999999999999999999999999999999999999999999988653211 111222 12
Q ss_pred HHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCC
Q psy7339 104 EQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGR 159 (223)
Q Consensus 104 ~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~ 159 (223)
..+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|+
T Consensus 84 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~ 163 (257)
T 2ej5_A 84 APMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGE 163 (257)
T ss_dssp HHHHHHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHhCC
Confidence 3333333 49999997 79999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 160 KLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 160 ~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
+++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....++
T Consensus 164 ~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~ 220 (257)
T 2ej5_A 164 KVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAIGLIKRLLRESEETTFD 220 (257)
T ss_dssp CEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCHH
T ss_pred ccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHH
Confidence 999999999999999999999999999999999999999999999999987655443
No 13
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.1e-37 Score=248.53 Aligned_cols=191 Identities=16% Similarity=0.095 Sum_probs=161.5
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhh----hHHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERL----DHYAR 101 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~----~~~~~ 101 (223)
+...++..|+| +..+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+....... ..+..
T Consensus 12 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 91 (258)
T 3lao_A 12 GRVTREQRGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGFRYPD 91 (258)
T ss_dssp CCEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBCCCCT
T ss_pred CeEEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhhHHHHH
Confidence 44667778899 88889999999999999999999999999999999999999999999998875422110 11111
Q ss_pred hHHHHhhhh--hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHH
Q psy7339 102 TTEQVKNRV--LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLY 156 (223)
Q Consensus 102 ~~~~~~~~~--~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l 156 (223)
....+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|+++++
T Consensus 92 ~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~l 171 (258)
T 3lao_A 92 GGVDPWGVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAMRYIL 171 (258)
T ss_dssp TCCCTTSCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 112222333 48999997 79999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcCc
Q psy7339 157 TGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHAT 217 (223)
Q Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~ 217 (223)
+|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++.
T Consensus 172 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~ 232 (258)
T 3lao_A 172 TGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVRAALQSAFQGRDEGDDA 232 (258)
T ss_dssp TCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-----
T ss_pred cCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999876555443
No 14
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=1.5e-36 Score=246.65 Aligned_cols=190 Identities=17% Similarity=0.155 Sum_probs=156.5
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhh-----hHHHH
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERL-----DHYAR 101 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~-----~~~~~ 101 (223)
...++.-|+| +..+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+....... ..+..
T Consensus 7 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T 3qmj_A 7 TLQIDDDNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSEGKF 86 (256)
T ss_dssp CEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCCCSS
T ss_pred eEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHHHHH
Confidence 4556777889 88889999999999999999999999999999999999999999999998875422110 00111
Q ss_pred hHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHc
Q psy7339 102 TTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYT 157 (223)
Q Consensus 102 ~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~ 157 (223)
.+..+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++
T Consensus 87 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~lt 166 (256)
T 3qmj_A 87 GFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMS 166 (256)
T ss_dssp HHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHHHHc
Confidence 122222223 39999997 799999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcCc
Q psy7339 158 GRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHAT 217 (223)
Q Consensus 158 g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~ 217 (223)
|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....++.
T Consensus 167 g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~ 226 (256)
T 3qmj_A 167 SEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLMAVKHTMVEPNRAQIAA 226 (256)
T ss_dssp CCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHCC-------
T ss_pred CCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHH
Confidence 999999999999999999999999999999999999999999999999999765554443
No 15
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=100.00 E-value=9.4e-37 Score=248.73 Aligned_cols=189 Identities=16% Similarity=0.204 Sum_probs=164.4
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCc-CCCCCCCcchh--------hh
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAG-IEPPPSCLPGE--------RL 96 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F-~aG~~~~~~~~--------~~ 96 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.| |+|.|+..... ..
T Consensus 4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~~~ 83 (263)
T 3lke_A 4 SYVHTEIQNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVRL 83 (263)
T ss_dssp CSEEEEECSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHHH
T ss_pred cEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHHHH
Confidence 34567778899 8889999999999999999999999999999999999999999999 99998864322 11
Q ss_pred hHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHH
Q psy7339 97 DHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVAS 152 (223)
Q Consensus 97 ~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~ 152 (223)
..+......+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|+
T Consensus 84 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~~~A~ 163 (263)
T 3lke_A 84 REVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTM 163 (263)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCHHHHH
Confidence 22233333333334 39999997 7999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCccccccC-ChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 153 ELLYTGRKLNAQEALQYGFVSGVFT-TEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 153 ~l~l~g~~~~a~eA~~~Glv~~v~~-~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
+++++|++++|+||+++||||+|+| ++++.+++.++|++|+..||.+++.+|+.+++.....+
T Consensus 164 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l 227 (263)
T 3lke_A 164 NLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIAATKKLLKGKAAEEL 227 (263)
T ss_dssp HHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCH
Confidence 9999999999999999999999999 89999999999999999999999999999987654433
No 16
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=100.00 E-value=4.6e-36 Score=247.73 Aligned_cols=189 Identities=19% Similarity=0.173 Sum_probs=160.7
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh-----------h
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE-----------R 95 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~-----------~ 95 (223)
...+..-|+| ...+++|+..|..+..|+.||.++++.++.|+++++|||+|.|+.||+|.|+..... .
T Consensus 25 ~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~ 104 (290)
T 3sll_A 25 VLVDRPRPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQPTI 104 (290)
T ss_dssp EEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHHHH
T ss_pred EEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccchhH
Confidence 4556778899 888899999999999999999999999999999999999999999999988754211 1
Q ss_pred hhHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCC-CccccchhhhcCHHH
Q psy7339 96 LDHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPE-GCSSVLFPRIFGNSV 150 (223)
Q Consensus 96 ~~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~-~g~~~~l~~~vg~~~ 150 (223)
...+......+...+ .+|+|+|+ ++++|++||+++|++|+ +|++++|++++|+.+
T Consensus 105 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG~~~ 184 (290)
T 3sll_A 105 ALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGTSR 184 (290)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhCHHH
Confidence 122333333343333 39999997 79999999999999999 999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHh-cCcC
Q psy7339 151 ASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILR-DGHA 216 (223)
Q Consensus 151 a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~-~~~~ 216 (223)
|++++++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++.... ..++
T Consensus 185 A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~l~ 251 (290)
T 3sll_A 185 ASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIELTKRTIWSGLDAASLE 251 (290)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCSCHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998766 4443
No 17
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.2e-36 Score=246.52 Aligned_cols=190 Identities=17% Similarity=0.134 Sum_probs=164.3
Q ss_pred Ccceeccccc-e-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh--hhhHHHHh
Q psy7339 27 SLAEFRLADH-I-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE--RLDHYART 102 (223)
Q Consensus 27 ~~~~~~~~d~-I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~--~~~~~~~~ 102 (223)
+...++..|+ | ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+..... ..+.+...
T Consensus 9 ~~i~~~~~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 88 (263)
T 3moy_A 9 TTIATSRPVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERN 88 (263)
T ss_dssp SSEEEECCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHHHHHTT
T ss_pred CeEEEEEeCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchhHHHHH
Confidence 4566777787 8 888999999999999999999999999999999999999999999999988754211 11112222
Q ss_pred HHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcC
Q psy7339 103 TEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTG 158 (223)
Q Consensus 103 ~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g 158 (223)
+..+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|
T Consensus 89 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ltg 168 (263)
T 3moy_A 89 LLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTG 168 (263)
T ss_dssp TTHHHHHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHHHHHHHHcC
Confidence 33333333 39999997 7999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 159 RKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 159 ~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|++++......++
T Consensus 169 ~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 226 (263)
T 3moy_A 169 RSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAINEAFERPLS 226 (263)
T ss_dssp CEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHH
T ss_pred CCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHH
Confidence 9999999999999999999999999999999999999999999999999987554443
No 18
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=100.00 E-value=4.4e-36 Score=245.63 Aligned_cols=188 Identities=16% Similarity=0.132 Sum_probs=162.6
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh------h---h
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER------L---D 97 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~------~---~ 97 (223)
...++.-|+| +..+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+...... . .
T Consensus 4 ~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 83 (269)
T 1nzy_A 4 AIGHRVEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFR 83 (269)
T ss_dssp SEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHH
T ss_pred eEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHHH
Confidence 3456667888 7789999999999999999999999999999999999999999999999888653211 1 1
Q ss_pred HHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHH
Q psy7339 98 HYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASE 153 (223)
Q Consensus 98 ~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 153 (223)
.+.+....+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++
T Consensus 84 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 163 (269)
T 1nzy_A 84 IAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAME 163 (269)
T ss_dssp HHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhHHHHHH
Confidence 2222233333333 49999997 79999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 154 LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 154 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
++++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......+
T Consensus 164 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~ 225 (269)
T 1nzy_A 164 LMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPV 225 (269)
T ss_dssp HHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCH
Confidence 99999999999999999999999999999999999999999999999999999987654433
No 19
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.2e-36 Score=247.70 Aligned_cols=188 Identities=14% Similarity=0.090 Sum_probs=162.5
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh----hhhHHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE----RLDHYAR 101 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~----~~~~~~~ 101 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.+ ++++++||++|.|+.||+|.|+..... ....+..
T Consensus 16 ~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 93 (275)
T 3hin_A 16 STLVVDTVGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHSQ 93 (275)
T ss_dssp GGEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHHH
T ss_pred CeEEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccChhhHHHHHH
Confidence 34667778899 8889999999999999999999999988 578999999999999999988865321 1112223
Q ss_pred hHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHc
Q psy7339 102 TTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYT 157 (223)
Q Consensus 102 ~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~ 157 (223)
.+..+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++
T Consensus 94 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~lt 173 (275)
T 3hin_A 94 TWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMMLT 173 (275)
T ss_dssp HHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHHc
Confidence 333333333 39999997 799999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 158 GRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 158 g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
|++++|+||+++||||+|||++++++++.+++++|+..||.+++.+|+++++.....++
T Consensus 174 G~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~ 232 (275)
T 3hin_A 174 GRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNFAVLQALPMIAEANPQ 232 (275)
T ss_dssp CCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHHHHHHHTHHHHHHHSCHH
T ss_pred CCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHH
Confidence 99999999999999999999999999999999999999999999999999987655443
No 20
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=100.00 E-value=4.4e-36 Score=246.26 Aligned_cols=190 Identities=15% Similarity=0.136 Sum_probs=163.8
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh--h-hHHHHh
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER--L-DHYART 102 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~--~-~~~~~~ 102 (223)
+...++..|+| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+...... . ..+...
T Consensus 25 ~~v~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 104 (278)
T 3h81_A 25 ETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADF 104 (278)
T ss_dssp SSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHHHHHHTT
T ss_pred CeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhhHHHHHH
Confidence 34667778889 8888999999999999999999999999999999999999999999999988642211 1 112222
Q ss_pred HHHHhhhhhcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCC
Q psy7339 103 TEQVKNRVLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGR 159 (223)
Q Consensus 103 ~~~~~~~~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~ 159 (223)
...+.....+++|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|+
T Consensus 105 ~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~l~ltG~ 184 (278)
T 3h81_A 105 FATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGR 184 (278)
T ss_dssp TGGGHHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHHHHHHHhCC
Confidence 2232222349999997 79999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 160 KLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 160 ~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
+++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++
T Consensus 185 ~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~ 241 (278)
T 3h81_A 185 TMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLS 241 (278)
T ss_dssp CEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTSCHH
T ss_pred CcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHH
Confidence 999999999999999999999999999999999999999999999999987554443
No 21
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=100.00 E-value=3.7e-36 Score=245.50 Aligned_cols=189 Identities=14% Similarity=0.069 Sum_probs=160.3
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhh--hHHHHhH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERL--DHYARTT 103 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~--~~~~~~~ 103 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+.. .... ..+....
T Consensus 9 ~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~-~~~~~~~~~~~~~ 87 (265)
T 3rsi_A 9 RELLVERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLSD-GWMVRDGSAPPLD 87 (265)
T ss_dssp CCEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------CCC
T ss_pred CcEEEEEECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCCc-ccccchHHHHHHh
Confidence 45677788899 888999999999999999999999999999999999999999999999998862 1111 1122222
Q ss_pred HH-Hhhhh----hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHH
Q psy7339 104 EQ-VKNRV----LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELL 155 (223)
Q Consensus 104 ~~-~~~~~----~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ 155 (223)
.. +...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++
T Consensus 88 ~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ 167 (265)
T 3rsi_A 88 PATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMI 167 (265)
T ss_dssp HHHHHHHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHH
Confidence 22 33333 58999997 7999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 156 YTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 156 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++
T Consensus 168 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 228 (265)
T 3rsi_A 168 LTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVRNAKEAIVRSGWLAEE 228 (265)
T ss_dssp HHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCHH
T ss_pred HcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHH
Confidence 9999999999999999999999999999999999999999999999999999987655443
No 22
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=100.00 E-value=2.5e-36 Score=245.05 Aligned_cols=184 Identities=16% Similarity=0.102 Sum_probs=160.5
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQ 105 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~ 105 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+...... ..+. .
T Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~-~~~~----~ 83 (256)
T 3pe8_A 9 PVLLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDT-TELP----D 83 (256)
T ss_dssp CSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-------------
T ss_pred CcEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhh-HHHH----H
Confidence 34667778899 8889999999999999999999999999999999999999999999999988764332 1111 1
Q ss_pred Hhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCC
Q psy7339 106 VKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKL 161 (223)
Q Consensus 106 ~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~ 161 (223)
+...+ .+++|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|+++
T Consensus 84 ~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltg~~~ 163 (256)
T 3pe8_A 84 ISPKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYL 163 (256)
T ss_dssp -CCCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred HHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHHHHHcCCCC
Confidence 22223 38999997 7999999999999999999999999999999999999999999
Q ss_pred CHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 162 NAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 162 ~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
+|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......+
T Consensus 164 ~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~ 217 (256)
T 3pe8_A 164 SAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVRALLDSYHRIDALQT 217 (256)
T ss_dssp EHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCH
Confidence 999999999999999999999999999999999999999999999987655443
No 23
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=100.00 E-value=6.9e-36 Score=245.22 Aligned_cols=187 Identities=12% Similarity=0.116 Sum_probs=160.8
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh--------hhH
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER--------LDH 98 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~--------~~~ 98 (223)
...++.-|+| +..+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+...... ...
T Consensus 10 ~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~ 89 (276)
T 2j5i_A 10 TVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEILQEK 89 (276)
T ss_dssp SEEEEEETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTHHHH
T ss_pred eEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHHHHH
Confidence 4556677888 7789999999999999999999999999999999999999999999999988542110 111
Q ss_pred HHHhHHHH-hhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHH
Q psy7339 99 YARTTEQV-KNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASE 153 (223)
Q Consensus 99 ~~~~~~~~-~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 153 (223)
+......+ ...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+++|++
T Consensus 90 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 169 (276)
T 2j5i_A 90 IRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLM 169 (276)
T ss_dssp HHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHH
Confidence 22111121 2233 49999997 79999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcC
Q psy7339 154 LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDG 214 (223)
Q Consensus 154 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~ 214 (223)
++++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....
T Consensus 170 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~ 230 (276)
T 2j5i_A 170 YIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCRELT 230 (276)
T ss_dssp HHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSC
T ss_pred HHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999998765443
No 24
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=100.00 E-value=6.4e-36 Score=243.81 Aligned_cols=190 Identities=11% Similarity=0.049 Sum_probs=160.4
Q ss_pred cCCcceecc-ccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh-------
Q psy7339 25 PASLAEFRL-ADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER------- 95 (223)
Q Consensus 25 pa~~~~~~~-~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~------- 95 (223)
+.+...+.. -|+| ...+++|+. |..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+......
T Consensus 4 ~~~~~~~~~~~~~v~~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 82 (263)
T 3l3s_A 4 SQDGLLGEVLSEGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEG 82 (263)
T ss_dssp ----CEEEEESSSEEEEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCS
T ss_pred CccceEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccc
Confidence 334455444 5778 888999999 999999999999999999999999999999999999999888653221
Q ss_pred ---hhHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCH
Q psy7339 96 ---LDHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGN 148 (223)
Q Consensus 96 ---~~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~ 148 (223)
...+.+....+...+ .+|+|+|+ ++++|++||+++|++ +++++++|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG~ 161 (263)
T 3l3s_A 83 RAFVTDLFEACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIGR 161 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcCH
Confidence 122333333343334 39999997 799999999999999 57789999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 149 SVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 149 ~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
.+|++++++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......++
T Consensus 162 ~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 229 (263)
T 3l3s_A 162 RAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAPLRRGLETLNRHLELPLE 229 (263)
T ss_dssp HHHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999987655443
No 25
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=100.00 E-value=2.7e-36 Score=248.53 Aligned_cols=183 Identities=12% Similarity=0.110 Sum_probs=159.1
Q ss_pred CCcceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC-CCcCCCCCCCcchhhh-------
Q psy7339 26 ASLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC-RAGIEPPPSCLPGERL------- 96 (223)
Q Consensus 26 a~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g-~~F~aG~~~~~~~~~~------- 96 (223)
-+...++.-|+| ...+++|+ .|..+..|+.||.++++.+++|+++++||++|.| +.||+|.|+.......
T Consensus 8 ~~~i~~~~~~~va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~ 86 (287)
T 3gkb_A 8 YSTLRVSSEHGVARIILDNPP-VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAA 86 (287)
T ss_dssp CSSEEEEEETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHH
T ss_pred CCeEEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhH
Confidence 355677788899 78888887 8999999999999999999999999999999998 7999999987543211
Q ss_pred --hHHHHhHHHHhhhh-hcccceee-----------------------e-cceeeccccccccCCCCccccchhhhcCHH
Q psy7339 97 --DHYARTTEQVKNRV-LLNHPVFV-----------------------L-QATFHTPFTLRGMTPEGCSSVLFPRIFGNS 149 (223)
Q Consensus 97 --~~~~~~~~~~~~~~-~~~~p~ia-----------------------~-~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~ 149 (223)
..+...+..+...+ .+|+|+|| + +++|++||+++|++|++|++++|++++|+.
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~ 166 (287)
T 3gkb_A 87 SAPADVNVFQAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGRN 166 (287)
T ss_dssp TSCTTCCTTHHHHHHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCHH
Confidence 00111122233333 49999997 6 899999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHh
Q psy7339 150 VASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRG 209 (223)
Q Consensus 150 ~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~ 209 (223)
+|+++++||++|+|+||+++||||+|+|++++++++.++|++|+..||.+++.+|+++++
T Consensus 167 ~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~ 226 (287)
T 3gkb_A 167 RALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIEAAKRSLPA 226 (287)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCTTHHHHHHHHSCC
T ss_pred HHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999999986
No 26
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=100.00 E-value=1.7e-36 Score=246.94 Aligned_cols=189 Identities=15% Similarity=0.080 Sum_probs=162.1
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhh-HHH-HhHH
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLD-HYA-RTTE 104 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~-~~~-~~~~ 104 (223)
...++.-|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+........ .+. ....
T Consensus 12 ~v~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 91 (262)
T 3r9q_A 12 AVRVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHPHGPG 91 (262)
T ss_dssp SEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCTTSSC
T ss_pred EEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHHhhhh
Confidence 3567778899 888999999999999999999999999999999999999999999999988865322111 000 0011
Q ss_pred HH-hhhhhcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCC
Q psy7339 105 QV-KNRVLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRK 160 (223)
Q Consensus 105 ~~-~~~~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~ 160 (223)
.+ .....+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|++
T Consensus 92 ~~~~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ltG~~ 171 (262)
T 3r9q_A 92 PMGPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILTGRP 171 (262)
T ss_dssp TTSSTTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHHCCC
T ss_pred HHHHHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHHHHcCCc
Confidence 11 112248999997 799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 161 LNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 161 ~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++
T Consensus 172 ~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~l~ 227 (262)
T 3r9q_A 172 VHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVRADRDSAIAQWGMAEE 227 (262)
T ss_dssp EEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHH
T ss_pred CCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHH
Confidence 99999999999999999999999999999999999999999999999887554443
No 27
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=100.00 E-value=9.8e-36 Score=243.73 Aligned_cols=185 Identities=15% Similarity=0.132 Sum_probs=160.8
Q ss_pred Ccceecccc-ce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh------hhH
Q psy7339 27 SLAEFRLAD-HI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER------LDH 98 (223)
Q Consensus 27 ~~~~~~~~d-~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~------~~~ 98 (223)
+...++..+ +| ...+++|+ .|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+...... ...
T Consensus 13 ~~v~~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 91 (272)
T 3qk8_A 13 PSLRFEPGEHGVLNLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIR 91 (272)
T ss_dssp TTEEEEECSTTEEEEEECCHH-HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHH
T ss_pred CeEEEEEeCCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHH
Confidence 456677665 78 88888999 9999999999999999999999999999999999999999888653221 112
Q ss_pred HHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHH
Q psy7339 99 YARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASEL 154 (223)
Q Consensus 99 ~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l 154 (223)
+......+...+ .+++|+|+ ++++|++||+++|++|++|++++|++++|+.+|+++
T Consensus 92 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l 171 (272)
T 3qk8_A 92 IMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYY 171 (272)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 222223333333 49999997 799999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHh
Q psy7339 155 LYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILR 212 (223)
Q Consensus 155 ~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~ 212 (223)
+++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|++++....
T Consensus 172 ~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~ 229 (272)
T 3qk8_A 172 LLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIRWTKRSLNHWYR 229 (272)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999987544
No 28
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=100.00 E-value=8.2e-36 Score=242.23 Aligned_cols=188 Identities=18% Similarity=0.209 Sum_probs=162.0
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh----hhhHHHHh
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE----RLDHYART 102 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~----~~~~~~~~ 102 (223)
...++.-|+| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+..... ....+...
T Consensus 17 ~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 96 (257)
T 1szo_A 17 NIRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEIIFE 96 (257)
T ss_dssp TEEEEEETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHHHH
T ss_pred eEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCHHHHHHHHHH
Confidence 4566777888 778889999999999999999999999999999999999999999999988864211 11122222
Q ss_pred HHHHhhhh-hcccceee----------------------ecceeec-cccccccCCCCccccchhhhcCHHHHHHHHHcC
Q psy7339 103 TEQVKNRV-LLNHPVFV----------------------LQATFHT-PFTLRGMTPEGCSSVLFPRIFGNSVASELLYTG 158 (223)
Q Consensus 103 ~~~~~~~~-~~~~p~ia----------------------~~a~f~~-pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g 158 (223)
...+...+ .+|+|+|+ ++++|++ ||+++|++|++|+++++++++|+.+|++++++|
T Consensus 97 ~~~~~~~l~~~~kPvIAav~G~a~GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~llltG 176 (257)
T 1szo_A 97 GQRLLNNLLSIEVPVIAAVNGPVTNAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFLLTG 176 (257)
T ss_dssp HHHHHHHHHHCCSCEEEEECSCBCSSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCcEEEEECCchHHHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHHcC
Confidence 22333333 49999997 7999999 999999999999999999999999999999999
Q ss_pred CCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 159 RKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 159 ~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....+
T Consensus 177 ~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l 233 (257)
T 1szo_A 177 QELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKVLTRQLRRVM 233 (257)
T ss_dssp CEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSHHHHHHH
T ss_pred CCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhccH
Confidence 999999999999999999999999999999999999999999999999988755444
No 29
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=100.00 E-value=6.5e-36 Score=239.69 Aligned_cols=188 Identities=12% Similarity=0.019 Sum_probs=160.3
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh----hhhHHHHh
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE----RLDHYART 102 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~----~~~~~~~~ 102 (223)
...++.-|+| ...++++ ..|..+..|+.||.++++.+++| ++++||++|.|+.||+|.|+..... ....+...
T Consensus 6 ~v~~~~~~~v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 83 (233)
T 3r6h_A 6 PVTYTHDDAIGVIRMDDG-KVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLRG 83 (233)
T ss_dssp CEEEEEETTEEEEEECCS-SSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---CHHHHHHHHH
T ss_pred ceEEEEECCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccChHHHHHHHHH
Confidence 4567778889 6777776 57999999999999999999987 5899999999999999988754221 12223333
Q ss_pred HHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcC
Q psy7339 103 TEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTG 158 (223)
Q Consensus 103 ~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g 158 (223)
...+...+ .+|+|+|+ ++++|++||+++|++|++++++++++++|+.+|++++++|
T Consensus 84 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~~l~ltg 163 (233)
T 3r6h_A 84 GFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLA 163 (233)
T ss_dssp HHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHHHHHHcC
Confidence 33333333 49999997 7999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcCc
Q psy7339 159 RKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHAT 217 (223)
Q Consensus 159 ~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~ 217 (223)
++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....+++
T Consensus 164 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~ 222 (233)
T 3r6h_A 164 KTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHNATKLRARAEALKAIRA 222 (233)
T ss_dssp CEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHHHHHHHHHTTHHHHHHHHH
T ss_pred CcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999998876655543
No 30
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=100.00 E-value=1.5e-35 Score=243.25 Aligned_cols=188 Identities=17% Similarity=0.132 Sum_probs=160.4
Q ss_pred cceecc-ccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh----------
Q psy7339 28 LAEFRL-ADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER---------- 95 (223)
Q Consensus 28 ~~~~~~-~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~---------- 95 (223)
...++. -++| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+......
T Consensus 4 ~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~ 83 (275)
T 1dci_A 4 SIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVA 83 (275)
T ss_dssp SEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSSHH
T ss_pred eEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccchhh
Confidence 344555 3567 8889999999999999999999999999999999999999999999999887542111
Q ss_pred -----hhHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhc
Q psy7339 96 -----LDHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIF 146 (223)
Q Consensus 96 -----~~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 146 (223)
...+...+..+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~v 163 (275)
T 1dci_A 84 RIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVI 163 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGGTC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHh
Confidence 111112222333333 49999997 7999999999999999999999999999
Q ss_pred CH-HHHHHHHHcCCCCCHHHHHHcCccccccCC-hhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 147 GN-SVASELLYTGRKLNAQEALQYGFVSGVFTT-EEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 147 g~-~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~-~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
|+ .+|++++++|++++|+||+++||||+|+|+ +++++++.+++++|+..||.+++.+|++++......+
T Consensus 164 G~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~ 234 (275)
T 1dci_A 164 GNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSV 234 (275)
T ss_dssp SCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCH
T ss_pred CcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCH
Confidence 99 999999999999999999999999999999 9999999999999999999999999999988655443
No 31
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=100.00 E-value=2.3e-35 Score=240.77 Aligned_cols=182 Identities=18% Similarity=0.148 Sum_probs=157.6
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcch---hh-hh--HH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPG---ER-LD--HY 99 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~---~~-~~--~~ 99 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+.... .. .. .+
T Consensus 5 ~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 84 (266)
T 3fdu_A 5 PHLNANLEGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGPAG 84 (266)
T ss_dssp TTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSCGG
T ss_pred CeEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhhHH
Confidence 34667778899 88889999999999999999999999999999999999999999999998875432 00 00 11
Q ss_pred HHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHH
Q psy7339 100 ARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELL 155 (223)
Q Consensus 100 ~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ 155 (223)
......+...+ .+++|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++
T Consensus 85 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ 164 (266)
T 3fdu_A 85 QVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELL 164 (266)
T ss_dssp GSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhCHHHHHHHH
Confidence 11122222223 39999997 7999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhH
Q psy7339 156 YTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGI 210 (223)
Q Consensus 156 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~ 210 (223)
++|++++|+||+++||||+|+| ++++++.++|++|+..||.+++.+|++++..
T Consensus 165 ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~ 217 (266)
T 3fdu_A 165 FTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASLKQTKALMKHD 217 (266)
T ss_dssp HHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHHHHHHHHHTTT
T ss_pred HhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence 9999999999999999999999 8999999999999999999999999999864
No 32
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=100.00 E-value=7.9e-36 Score=242.92 Aligned_cols=188 Identities=18% Similarity=0.173 Sum_probs=162.0
Q ss_pred cceecccc-ce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh-----hhhHHH
Q psy7339 28 LAEFRLAD-HI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE-----RLDHYA 100 (223)
Q Consensus 28 ~~~~~~~d-~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~-----~~~~~~ 100 (223)
...++.-| +| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+..... ....+.
T Consensus 24 ~i~~~~~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~ 103 (263)
T 2j5g_A 24 NLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWDKTY 103 (263)
T ss_dssp TEEEEECTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHHHHH
T ss_pred eEEEEEcCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHHHHH
Confidence 45566677 88 788889999999999999999999999999999999999999999999988864321 111222
Q ss_pred HhHHHHhhhh-hcccceee----------------------ecceeec-cccccccCCCCccccchhhhcCHHHHHHHHH
Q psy7339 101 RTTEQVKNRV-LLNHPVFV----------------------LQATFHT-PFTLRGMTPEGCSSVLFPRIFGNSVASELLY 156 (223)
Q Consensus 101 ~~~~~~~~~~-~~~~p~ia----------------------~~a~f~~-pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l 156 (223)
.....+...+ .+|+|+|+ ++++|++ ||+++|++|++|++++|++++|+++|+++++
T Consensus 104 ~~~~~~~~~l~~~~kPvIAav~G~a~GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lll 183 (263)
T 2j5g_A 104 WEGKKVLQNLLDIEVPVISAVNGAALLHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGRYFLF 183 (263)
T ss_dssp HHHHHHHHHHHTCCSCEEEEECSEECSCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCcchHHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHHH
Confidence 2222333333 49999997 7899999 9999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 157 TGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
+|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....+
T Consensus 184 tG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l 242 (263)
T 2j5g_A 184 TQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALTQRLKRLV 242 (263)
T ss_dssp TTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhccH
Confidence 99999999999999999999999999999999999999999999999999988765444
No 33
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=1.3e-35 Score=242.14 Aligned_cols=184 Identities=11% Similarity=0.044 Sum_probs=160.5
Q ss_pred cceecc-ccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh-------hhH
Q psy7339 28 LAEFRL-ADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER-------LDH 98 (223)
Q Consensus 28 ~~~~~~-~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~-------~~~ 98 (223)
...++. -|+| +..+++|+ .|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+. .... ...
T Consensus 11 ~v~~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~~~ 88 (264)
T 1wz8_A 11 GLAFAWPRPGVLEITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEALLR 88 (264)
T ss_dssp TEEEEEEETTEEEEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHHHH
T ss_pred eEEEEEccCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHHHH
Confidence 455666 7888 77889999 99999999999999999999999999999999999999999986 3221 112
Q ss_pred HHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHH
Q psy7339 99 YARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASEL 154 (223)
Q Consensus 99 ~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l 154 (223)
+.+....+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|+++
T Consensus 89 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 168 (264)
T 1wz8_A 89 VFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYH 168 (264)
T ss_dssp HHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHHHH
Confidence 222233333333 49999997 799999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhc
Q psy7339 155 LYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRD 213 (223)
Q Consensus 155 ~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~ 213 (223)
+++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++.....
T Consensus 169 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~ 227 (264)
T 1wz8_A 169 LLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALHHTKHALNHWYRS 227 (264)
T ss_dssp HHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHT
T ss_pred HHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999886554
No 34
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=2.7e-36 Score=246.30 Aligned_cols=190 Identities=17% Similarity=0.080 Sum_probs=163.7
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhh----HHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLD----HYAR 101 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~----~~~~ 101 (223)
+...++..|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+........ .+..
T Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 88 (265)
T 3swx_A 9 ETLRIRRDGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTPE 88 (265)
T ss_dssp SSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CCCCCT
T ss_pred ceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhHHHHH
Confidence 45667788999 888999999999999999999999999999999999999999999999988754221110 0111
Q ss_pred hHHHHhhhh--hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHH
Q psy7339 102 TTEQVKNRV--LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLY 156 (223)
Q Consensus 102 ~~~~~~~~~--~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l 156 (223)
....+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|+++++
T Consensus 89 ~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 168 (265)
T 3swx_A 89 GGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWML 168 (265)
T ss_dssp TCCCTTCCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHHHHHHHHH
Confidence 111222233 48999997 79999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 157 TGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
+|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++
T Consensus 169 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~ 228 (265)
T 3swx_A 169 TADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQATLRNARLAVREGDA 228 (265)
T ss_dssp TCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCHH
T ss_pred cCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHH
Confidence 999999999999999999999999999999999999999999999999999987665543
No 35
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=100.00 E-value=4.3e-36 Score=245.04 Aligned_cols=191 Identities=16% Similarity=0.179 Sum_probs=164.7
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhh----hHHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERL----DHYAR 101 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~----~~~~~ 101 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+....... ..+..
T Consensus 7 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 86 (265)
T 3qxz_A 7 TELHEEIRDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDFS 86 (265)
T ss_dssp CEEEEEEETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSCCC
T ss_pred ceEEEEEECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHHHH
Confidence 34567777889 88889999999999999999999999999999999999999999999998886532210 00111
Q ss_pred hHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHc
Q psy7339 102 TTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYT 157 (223)
Q Consensus 102 ~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~ 157 (223)
. ..+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++
T Consensus 87 ~-~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~lt 165 (265)
T 3qxz_A 87 A-SPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLT 165 (265)
T ss_dssp S-CCSSSCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHHc
Confidence 1 2222223 49999997 799999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhc-chHHHHHHHHHHHhHHhcCcCcc
Q psy7339 158 GRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKL-SSCIVSLLAHLMRGILRDGHATT 218 (223)
Q Consensus 158 g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~-~~~a~~~~K~~l~~~~~~~~~~~ 218 (223)
|++++|+||+++||||+|+|++++++++.+++++|+.. ||.+++.+|+++++.....++..
T Consensus 166 g~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a~~~~K~~l~~~~~~~l~~~ 227 (265)
T 3qxz_A 166 GASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAALTKRLLWDAQMTGMSAA 227 (265)
T ss_dssp CCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCHH
T ss_pred CCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhhcCCHHHH
Confidence 99999999999999999999999999999999999999 99999999999998877666543
No 36
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=100.00 E-value=1.2e-35 Score=241.70 Aligned_cols=187 Identities=15% Similarity=0.149 Sum_probs=160.7
Q ss_pred ceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh---hhHHHHhHH
Q psy7339 29 AEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER---LDHYARTTE 104 (223)
Q Consensus 29 ~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~---~~~~~~~~~ 104 (223)
..++.-++| +..+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+...... ...+...++
T Consensus 7 v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 86 (258)
T 2pbp_A 7 IAARQEGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLNQFA 86 (258)
T ss_dssp EEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHCTTH
T ss_pred EEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhHHHHHHHH
Confidence 445666788 7888999999999999999999999999999999999999999999999988542111 112222122
Q ss_pred HHhhhhhcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCC
Q psy7339 105 QVKNRVLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKL 161 (223)
Q Consensus 105 ~~~~~~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~ 161 (223)
.+.....+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|+++
T Consensus 87 ~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~ 166 (258)
T 2pbp_A 87 DWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARM 166 (258)
T ss_dssp HHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred HHHHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHHHHHHHHcCCcc
Confidence 22222249999997 7999999999999999999999999999999999999999999
Q ss_pred CHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 162 NAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 162 ~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
+|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......+
T Consensus 167 ~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~ 220 (258)
T 2pbp_A 167 SAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLALRLIKEAVQKAVDYPL 220 (258)
T ss_dssp EHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCH
T ss_pred CHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCH
Confidence 999999999999999999999999999999999999999999999988765444
No 37
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=2.5e-35 Score=242.28 Aligned_cols=184 Identities=23% Similarity=0.305 Sum_probs=158.2
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh----h----hhH
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE----R----LDH 98 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~----~----~~~ 98 (223)
...++.-|+| ...+++|+..|..+..|+.||.++++.++.|+++ +||++|.|+.||+|.|+..... . .+.
T Consensus 27 ~i~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~ 105 (280)
T 2f6q_A 27 TLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKN 105 (280)
T ss_dssp SEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHHHH
T ss_pred eEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhHHHHH
Confidence 4556777888 7788999999999999999999999999999999 9999999999999988864221 1 111
Q ss_pred HHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHH
Q psy7339 99 YARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASEL 154 (223)
Q Consensus 99 ~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l 154 (223)
+...+..+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|..+|+++
T Consensus 106 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l 185 (280)
T 2f6q_A 106 NAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEM 185 (280)
T ss_dssp HHHHHHHHHHHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHHHHHHH
Confidence 222233333333 49999997 799999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHh
Q psy7339 155 LYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILR 212 (223)
Q Consensus 155 ~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~ 212 (223)
+++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++...
T Consensus 186 ~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~ 243 (280)
T 2f6q_A 186 LIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKRER 243 (280)
T ss_dssp HTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGH
T ss_pred HHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999999999987543
No 38
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=100.00 E-value=1.9e-35 Score=242.29 Aligned_cols=186 Identities=13% Similarity=0.113 Sum_probs=162.0
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh------hhHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER------LDHY 99 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~------~~~~ 99 (223)
+...+...|+| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+...... ...+
T Consensus 28 ~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 107 (276)
T 3rrv_A 28 TEIDVRADGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKT 107 (276)
T ss_dssp TTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHHH
T ss_pred CeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHHH
Confidence 45667888999 8889999999999999999999999999999999999999999999999988653221 1122
Q ss_pred HHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHH
Q psy7339 100 ARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELL 155 (223)
Q Consensus 100 ~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ 155 (223)
......+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++
T Consensus 108 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ell 187 (276)
T 3rrv_A 108 IRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYA 187 (276)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHHHH
Confidence 22233333333 49999997 7999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcC
Q psy7339 156 YTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDG 214 (223)
Q Consensus 156 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~ 214 (223)
++|++++|+||+++||||+|+ +++++++.++|++|+..||.+++.+|+.+++.....
T Consensus 188 ltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~~~~ 244 (276)
T 3rrv_A 188 LTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQAVESTKRVLNIHLERA 244 (276)
T ss_dssp HHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC
Confidence 999999999999999999999 899999999999999999999999999998765443
No 39
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=100.00 E-value=1.1e-35 Score=240.98 Aligned_cols=182 Identities=13% Similarity=0.109 Sum_probs=157.6
Q ss_pred eccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcC-CCCCcCCCCCCCcchh-----hhhHHHHhH
Q psy7339 31 FRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDE-LCRAGIEPPPSCLPGE-----RLDHYARTT 103 (223)
Q Consensus 31 ~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~-~g~~F~aG~~~~~~~~-----~~~~~~~~~ 103 (223)
++.-|+| +..+++|+..|..+..|+.||.++++.+++|+++++||++| .|+.||+|.|+..... ....+....
T Consensus 4 ~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T 2a7k_A 4 EENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRV 83 (250)
T ss_dssp EEEETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHH
T ss_pred EEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHHHHH
Confidence 4455778 77889999999999999999999999999999999999999 9999999998854211 112222223
Q ss_pred HHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCC
Q psy7339 104 EQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGR 159 (223)
Q Consensus 104 ~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~ 159 (223)
..+...+ .+|+|+|+ ++++|++||+++|++|++|++ +|++++|+++|++++++|+
T Consensus 84 ~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ltg~ 162 (250)
T 2a7k_A 84 IDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEIIYQCQ 162 (250)
T ss_dssp HHHHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHHHcCC
Confidence 3333333 49999997 799999999999999999999 9999999999999999999
Q ss_pred CCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhc
Q psy7339 160 KLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRD 213 (223)
Q Consensus 160 ~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~ 213 (223)
+++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++.....
T Consensus 163 ~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~ 216 (250)
T 2a7k_A 163 SLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFINTKRAVNKPFIH 216 (250)
T ss_dssp CBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999875443
No 40
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=100.00 E-value=5.9e-36 Score=245.93 Aligned_cols=189 Identities=16% Similarity=0.083 Sum_probs=155.1
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhh--hHHHH--
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERL--DHYAR-- 101 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~--~~~~~-- 101 (223)
+...++..++| +..+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+....... +.+..
T Consensus 20 ~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 99 (278)
T 4f47_A 20 PDALVEQRGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKDGS 99 (278)
T ss_dssp CSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC---------------------
T ss_pred CceEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHHHH
Confidence 34667778889 78899999999999999999999999999999999999999999999998886532211 11111
Q ss_pred hHHHHhhhh----hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHH
Q psy7339 102 TTEQVKNRV----LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASEL 154 (223)
Q Consensus 102 ~~~~~~~~~----~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l 154 (223)
....+...+ .+++|+|+ ++++|++||+++|++|++|++++|++++|+.+|+++
T Consensus 100 ~~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l 179 (278)
T 4f47_A 100 YDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDL 179 (278)
T ss_dssp -CTTCBTTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 112222222 48999997 799999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 155 LYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 155 ~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
+++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....+
T Consensus 180 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l 240 (278)
T 4f47_A 180 LLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQAILRTIRETEGMHE 240 (278)
T ss_dssp HHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCH
T ss_pred HHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCH
Confidence 9999999999999999999999999999999999999999999999999999998755444
No 41
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=7.6e-36 Score=243.53 Aligned_cols=189 Identities=13% Similarity=0.060 Sum_probs=159.3
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhh--HHHHhH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLD--HYARTT 103 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~--~~~~~~ 103 (223)
+...++..|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+........ .....+
T Consensus 15 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 94 (265)
T 3qxi_A 15 PEVLVEQRDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEGRGL 94 (265)
T ss_dssp CCEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETTTEE
T ss_pred CeEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhhhhh
Confidence 35667778899 888899999999999999999999999999999999999999999999988865221100 000000
Q ss_pred HHHhhhhhcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCC
Q psy7339 104 EQVKNRVLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRK 160 (223)
Q Consensus 104 ~~~~~~~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~ 160 (223)
.+.... .++|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|++
T Consensus 95 -~~~~~~-~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~ 172 (265)
T 3qxi_A 95 -GFTERP-PAKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDN 172 (265)
T ss_dssp -TTTTSC-CSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCC
T ss_pred -hHHHhh-CCCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHHHHHHcCCC
Confidence 122212 3889987 799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcCc
Q psy7339 161 LNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHAT 217 (223)
Q Consensus 161 ~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~ 217 (223)
++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++.
T Consensus 173 ~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~ 229 (265)
T 3qxi_A 173 LSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVAATKRIITESRGWSLDT 229 (265)
T ss_dssp EEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCTTT
T ss_pred cCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHH
Confidence 999999999999999999999999999999999999999999999999877665554
No 42
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.5e-35 Score=240.64 Aligned_cols=188 Identities=16% Similarity=0.108 Sum_probs=161.6
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcC-CCCCcCCCCCCCcchh---hhhHHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDE-LCRAGIEPPPSCLPGE---RLDHYAR 101 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~-~g~~F~aG~~~~~~~~---~~~~~~~ 101 (223)
+...++.-|+| +..+++| ..|..+..|+.||.++++.+++|+++++||++| .|+.||+|.|+..... ....+.+
T Consensus 9 ~~i~~~~~~~v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~ 87 (265)
T 2ppy_A 9 QYLTVFKEDGIAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSADPRFKTQFC 87 (265)
T ss_dssp SSEEEEEETTEEEEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSCHHHHHHHH
T ss_pred CeEEEEeeCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhccchhHHHHHH
Confidence 34556777888 7788888 999999999999999999999999999999999 9999999988754211 1112222
Q ss_pred hH-HHHhhhh-hcccceee-----------------------ecc-eeeccccccccCCCCccccchhhhcCHHHHHHHH
Q psy7339 102 TT-EQVKNRV-LLNHPVFV-----------------------LQA-TFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELL 155 (223)
Q Consensus 102 ~~-~~~~~~~-~~~~p~ia-----------------------~~a-~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ 155 (223)
.+ ..+...+ .+|+|+|+ +++ +|++||+++|++|++|++++|++++|+.+|++++
T Consensus 88 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ 167 (265)
T 2ppy_A 88 LFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDMN 167 (265)
T ss_dssp HHHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHH
Confidence 33 3333333 39999997 789 9999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 156 YTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 156 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......+
T Consensus 168 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~ 227 (265)
T 2ppy_A 168 ITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAVSNIKLAIMNGKEMPL 227 (265)
T ss_dssp HHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCH
T ss_pred HhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCH
Confidence 999999999999999999999999999999999999999999999999999988654433
No 43
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=100.00 E-value=5.8e-36 Score=245.53 Aligned_cols=188 Identities=16% Similarity=0.161 Sum_probs=159.6
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhh--------
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLD-------- 97 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~-------- 97 (223)
+...++..|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+........
T Consensus 11 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 90 (274)
T 3tlf_A 11 DTIKYEVDGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPYL 90 (274)
T ss_dssp SSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CTT
T ss_pred CceEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccchh
Confidence 45667788899 888999999999999999999999999999999999999999999999988865322111
Q ss_pred ----HHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHH
Q psy7339 98 ----HYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNS 149 (223)
Q Consensus 98 ----~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~ 149 (223)
.+. .+..+...+ .+++|+|+ ++++|++||+++|++| +|++++|++++|+.
T Consensus 91 ~~~~~~~-~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~~ 168 (274)
T 3tlf_A 91 STYDQWE-APQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPRS 168 (274)
T ss_dssp CSGGGGS-CCCTTCCCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCHH
T ss_pred hHHHHHH-HHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCHH
Confidence 111 112222223 39999997 7999999999999999 99999999999999
Q ss_pred HHHHHHHcCC--CCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 150 VASELLYTGR--KLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 150 ~a~~l~l~g~--~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
+|++++++|+ +++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|++++......++
T Consensus 169 ~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 237 (274)
T 3tlf_A 169 IALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVRGTRLAILKGLNVPLH 237 (274)
T ss_dssp HHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHH
Confidence 9999999999 999999999999999999999999999999999999999999999999987655443
No 44
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=243.62 Aligned_cols=187 Identities=19% Similarity=0.099 Sum_probs=161.7
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh-----hhhHHHH
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE-----RLDHYAR 101 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~-----~~~~~~~ 101 (223)
...++.-++| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+..... ....+.+
T Consensus 34 ~v~~~~~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~ 113 (287)
T 2vx2_A 34 PTSARQLDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQ 113 (287)
T ss_dssp SEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHHHH
T ss_pred ceEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHHHH
Confidence 4557777888 788899999999999999999999999999999999999999999999998865322 1122222
Q ss_pred hHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHc
Q psy7339 102 TTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYT 157 (223)
Q Consensus 102 ~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~ 157 (223)
....+...+ .+|+|+|+ ++++|++||+++|++|++|+++ |++++|..+|++++++
T Consensus 114 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~lllt 192 (287)
T 2vx2_A 114 TCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEMLFT 192 (287)
T ss_dssp HHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHHHHHh
Confidence 233333333 49999997 7999999999999999999999 9999999999999999
Q ss_pred CCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 158 GRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 158 g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....+
T Consensus 193 g~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l 250 (287)
T 2vx2_A 193 GEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKATFYKQLPQDL 250 (287)
T ss_dssp CCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCH
T ss_pred CCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCH
Confidence 9999999999999999999999999999999999999999999999999987654433
No 45
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=100.00 E-value=2.5e-35 Score=240.00 Aligned_cols=182 Identities=19% Similarity=0.212 Sum_probs=156.7
Q ss_pred ccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh--hhHHHH-hHHHHhhh
Q psy7339 34 ADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER--LDHYAR-TTEQVKNR 109 (223)
Q Consensus 34 ~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~--~~~~~~-~~~~~~~~ 109 (223)
.++| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+...... ...+.. ....+...
T Consensus 14 ~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~l 93 (260)
T 1mj3_A 14 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHI 93 (260)
T ss_dssp GGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGG
T ss_pred cCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchHHHHHHHHHHHHHH
Confidence 5677 7888999999999999999999999999999999999999999999999888542110 111111 11122222
Q ss_pred hhcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCCCHHHH
Q psy7339 110 VLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEA 166 (223)
Q Consensus 110 ~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA 166 (223)
..+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|++++|+||
T Consensus 94 ~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~~~a~eA 173 (260)
T 1mj3_A 94 TRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDA 173 (260)
T ss_dssp GGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHHHHHHCCCEEHHHH
T ss_pred HhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcCCcCCHHHH
Confidence 349999997 799999999999999999999999999999999999999999999999
Q ss_pred HHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 167 LQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 167 ~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......+
T Consensus 174 ~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~ 222 (260)
T 1mj3_A 174 KQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTL 222 (260)
T ss_dssp HHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGSSCH
T ss_pred HHcCCccEEeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCH
Confidence 9999999999999999999999999999999999999999987654433
No 46
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.2e-35 Score=241.45 Aligned_cols=187 Identities=13% Similarity=0.094 Sum_probs=163.0
Q ss_pred ceeccc--cce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcch-----hhhhHHH
Q psy7339 29 AEFRLA--DHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPG-----ERLDHYA 100 (223)
Q Consensus 29 ~~~~~~--d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~-----~~~~~~~ 100 (223)
..++.. |+| ...+++|+..|..+..|+.||.++++.++.|+++++|||+|.|+.||+|.|+.... .....+.
T Consensus 26 v~~~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~ 105 (286)
T 3myb_A 26 LLLQDRDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLF 105 (286)
T ss_dssp SEEEEECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHH
T ss_pred EEEEEecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHHHHHHHH
Confidence 566777 889 88889999999999999999999999999999999999999999999998875422 1222233
Q ss_pred HhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHH
Q psy7339 101 RTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLY 156 (223)
Q Consensus 101 ~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l 156 (223)
.....+...+ .+++|+|+ ++++|++||+++|++ +++++++|++++|..+|+++++
T Consensus 106 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~~A~~lll 184 (286)
T 3myb_A 106 ARCTDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRKAAFEMLV 184 (286)
T ss_dssp HHHHHHHHHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHHHHHHHHH
Confidence 3333443334 39999997 799999999999999 7889999999999999999999
Q ss_pred cCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 157 TGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
+|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++.....++
T Consensus 185 tG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~ 244 (286)
T 3myb_A 185 TGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVAMGKALFYRQIETDIE 244 (286)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSCHH
T ss_pred cCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHH
Confidence 999999999999999999999999999999999999999999999999999987655443
No 47
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=100.00 E-value=6.2e-36 Score=242.91 Aligned_cols=187 Identities=13% Similarity=0.072 Sum_probs=162.1
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhh--hHHHHhH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERL--DHYARTT 103 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~--~~~~~~~ 103 (223)
+...++..|+| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+....... .... .+
T Consensus 7 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~-~~ 85 (256)
T 3trr_A 7 DEVLIEQRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSER-GL 85 (256)
T ss_dssp CSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEETT-EE
T ss_pred CceEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhhh-hh
Confidence 45667788999 88899999999999999999999999999999999999999999999998875421100 0000 00
Q ss_pred HHHhhhhhcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCC
Q psy7339 104 EQVKNRVLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRK 160 (223)
Q Consensus 104 ~~~~~~~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~ 160 (223)
.+... .+++|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|++
T Consensus 86 -~~~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg~~ 163 (256)
T 3trr_A 86 -GFTNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGES 163 (256)
T ss_dssp -TTSSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHCCC
T ss_pred -hHHHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHHHHHHHhCCC
Confidence 12222 58999997 799999999999999999999999999999999999999999
Q ss_pred CCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 161 LNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 161 ~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+++++.....++
T Consensus 164 ~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~ 219 (256)
T 3trr_A 164 FTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVAATKRIIIESASWAPE 219 (256)
T ss_dssp EEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHH
T ss_pred cCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHH
Confidence 99999999999999999999999999999999999999999999999987655443
No 48
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=100.00 E-value=4.6e-35 Score=240.05 Aligned_cols=185 Identities=17% Similarity=0.087 Sum_probs=157.6
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcC-----CC-CCcCCCCCCCcchhhh---
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDE-----LC-RAGIEPPPSCLPGERL--- 96 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~-----~g-~~F~aG~~~~~~~~~~--- 96 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.++.|+++++||++| .| +.||+|.|+.......
T Consensus 10 ~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~~~ 89 (275)
T 4eml_A 10 DDILYYKAGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGYID 89 (275)
T ss_dssp SSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC---------
T ss_pred ceEEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccccc
Confidence 34567778899 88899999999999999999999999999999999999999 88 5999998886532210
Q ss_pred -hHH-HHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHH
Q psy7339 97 -DHY-ARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSV 150 (223)
Q Consensus 97 -~~~-~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~ 150 (223)
... ......+...+ .+|+|+|+ ++++|++||+++|++|+++++++|++++|+.+
T Consensus 90 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG~~~ 169 (275)
T 4eml_A 90 DQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQKK 169 (275)
T ss_dssp -----CCCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHH
T ss_pred hhhHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhHHHH
Confidence 000 01122233333 49999997 79999999999999999988999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHH
Q psy7339 151 ASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGIL 211 (223)
Q Consensus 151 a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~ 211 (223)
|++++++|++++|+||+++||||+|+|++++++++.++|++|+..||.+++.+|++++...
T Consensus 170 A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~ 230 (275)
T 4eml_A 170 AREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAFNADC 230 (275)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999998753
No 49
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=2.2e-35 Score=243.58 Aligned_cols=184 Identities=23% Similarity=0.291 Sum_probs=157.9
Q ss_pred cceeccccce-eeecc-cccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh--------hh
Q psy7339 28 LAEFRLADHI-YTRIG-FNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER--------LD 97 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~-~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~--------~~ 97 (223)
...++.-|+| ...++ +|+..|..+..|+.||.++++.++.|+. ++||++|.|+.||+|.|+...... ..
T Consensus 24 ~v~~~~~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~~ 102 (291)
T 2fbm_A 24 DIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASL 102 (291)
T ss_dssp SEEEEECSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHH
T ss_pred eEEEEEeCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccchhHHH
Confidence 4556777888 67777 5889999999999999999999998875 999999999999999998643211 11
Q ss_pred HHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHH
Q psy7339 98 HYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASE 153 (223)
Q Consensus 98 ~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 153 (223)
.+...+..+...+ .+|+|+|| ++++|++||+++|++|++|++++|++++|..+|++
T Consensus 103 ~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~e 182 (291)
T 2fbm_A 103 EMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANE 182 (291)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhHHHHHH
Confidence 1222223333333 49999997 79999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHh
Q psy7339 154 LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILR 212 (223)
Q Consensus 154 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~ 212 (223)
++++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|++++....
T Consensus 183 l~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~ 241 (291)
T 2fbm_A 183 MLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIK 241 (291)
T ss_dssp HHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSCHHHHHHHHHHHHTTTH
T ss_pred HHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999987543
No 50
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=100.00 E-value=2.6e-35 Score=240.08 Aligned_cols=184 Identities=25% Similarity=0.326 Sum_probs=157.4
Q ss_pred cceeccccce-eeecc-cccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh--------hh
Q psy7339 28 LAEFRLADHI-YTRIG-FNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER--------LD 97 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~-~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~--------~~ 97 (223)
...++.-|+| ...++ +++..|..+..|+.||.++++.+++|+. ++||++|.|+.||+|.|+...... ..
T Consensus 6 ~i~~~~~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~~-r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 84 (261)
T 2gtr_A 6 DIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLTDDRKREST 84 (261)
T ss_dssp SEEEEEETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSSC-SCEEEEESSSCSBCEECHHHHHHHHHHCHHHHHH
T ss_pred eEEEEEeCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCCC-EEEEEecCCCccccccCchhhhhccccchhhHHH
Confidence 3456667888 66777 5889999999999999999999998874 999999999999999988642211 11
Q ss_pred HHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHH
Q psy7339 98 HYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASE 153 (223)
Q Consensus 98 ~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 153 (223)
.+......+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++
T Consensus 85 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 164 (261)
T 2gtr_A 85 KMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANE 164 (261)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHHHHHH
Confidence 2222233333333 49999997 79999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHh
Q psy7339 154 LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILR 212 (223)
Q Consensus 154 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~ 212 (223)
++++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++...
T Consensus 165 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~ 223 (261)
T 2gtr_A 165 MLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMK 223 (261)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTTH
T ss_pred HHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999987543
No 51
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=3.2e-35 Score=235.47 Aligned_cols=186 Identities=12% Similarity=0.072 Sum_probs=157.5
Q ss_pred ceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh---hhhHHHHhHH
Q psy7339 29 AEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE---RLDHYARTTE 104 (223)
Q Consensus 29 ~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~---~~~~~~~~~~ 104 (223)
..++..|+| +..++++ +.|..+..|+.||.++++.++.| .++||++|.|+.||+|.|+..... ....+.....
T Consensus 8 v~~~~~~~v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 84 (232)
T 3ot6_A 8 VSYHLDDGVATLTLNNG-KVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQGS 84 (232)
T ss_dssp EEEEEETTEEEEEECCT-TTTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHHHH
T ss_pred eEEEEECCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhChHHHHHHHHHHH
Confidence 456677889 7777776 57999999999999999999976 489999999999999998865322 1122333333
Q ss_pred HHhhhh-hcccceee-----------------------ec-ceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCC
Q psy7339 105 QVKNRV-LLNHPVFV-----------------------LQ-ATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGR 159 (223)
Q Consensus 105 ~~~~~~-~~~~p~ia-----------------------~~-a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~ 159 (223)
.+...+ .+|+|+|+ ++ ++|++||+++|++|++++++++++++|+.+|++++++|+
T Consensus 85 ~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l~ltg~ 164 (232)
T 3ot6_A 85 TLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVINAE 164 (232)
T ss_dssp HHHHHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHHHTSCC
T ss_pred HHHHHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHHHHcCC
Confidence 333333 49999997 55 799999999999988888999999999999999999999
Q ss_pred CCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcCc
Q psy7339 160 KLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHAT 217 (223)
Q Consensus 160 ~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~ 217 (223)
+++|+||+++||||+|+|++++++++.++|++|+..||.+++.+|+.+++.....+++
T Consensus 165 ~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~ 222 (232)
T 3ot6_A 165 MFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHKKTKLKVRKGLLDTLDA 222 (232)
T ss_dssp EECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhHHHH
Confidence 9999999999999999999999999999999999999999999999999886655543
No 52
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=100.00 E-value=1.2e-34 Score=238.99 Aligned_cols=185 Identities=16% Similarity=0.133 Sum_probs=157.1
Q ss_pred Ccceeccc-cce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC-CCcCCCCCCCcchhhh------h
Q psy7339 27 SLAEFRLA-DHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC-RAGIEPPPSCLPGERL------D 97 (223)
Q Consensus 27 ~~~~~~~~-d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g-~~F~aG~~~~~~~~~~------~ 97 (223)
+...++.. |+| ...+++++..|..+..|+.||.++++.++.|+++++||++|.| +.||+|.|+....... .
T Consensus 27 ~~v~~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~~~~ 106 (289)
T 3t89_A 27 EDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG 106 (289)
T ss_dssp SSEEEEEETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC-------------
T ss_pred CeEEEEEecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccchhhhH
Confidence 34566776 889 7889999999999999999999999999999999999999999 5999998886532210 0
Q ss_pred HHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHH
Q psy7339 98 HYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASE 153 (223)
Q Consensus 98 ~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 153 (223)
.+......+...+ .+++|+|+ ++++|++||+++|++|+++++++|++++|+.+|++
T Consensus 107 ~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~~~A~~ 186 (289)
T 3t89_A 107 VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKARE 186 (289)
T ss_dssp ---CTHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCHHHHHH
Confidence 1111122333333 39999997 79999999999998888888999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHH
Q psy7339 154 LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGIL 211 (223)
Q Consensus 154 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~ 211 (223)
++++|++++|+||+++||||+|+|++++++++.++|++|+..||.+++.+|++++...
T Consensus 187 llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~ 244 (289)
T 3t89_A 187 IWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADC 244 (289)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTT
T ss_pred HHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999998753
No 53
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=100.00 E-value=7.5e-36 Score=240.74 Aligned_cols=182 Identities=12% Similarity=0.153 Sum_probs=156.5
Q ss_pred eccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhh
Q psy7339 31 FRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNR 109 (223)
Q Consensus 31 ~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~ 109 (223)
++.-|+| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+............ ...+...
T Consensus 7 ~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~-~~~~~~~ 85 (243)
T 2q35_A 7 TELGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEVE-VLDLSGL 85 (243)
T ss_dssp EEEETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCCC-CCCCHHH
T ss_pred EEeeCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchhhH-HHHHHHH
Confidence 3456778 7888999999999999999999999999999999999999999999999987532111000000 1122222
Q ss_pred h-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCCCHHH
Q psy7339 110 V-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQE 165 (223)
Q Consensus 110 ~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~e 165 (223)
+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+++|++++++|++++|+|
T Consensus 86 l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~~~~a~e 165 (243)
T 2q35_A 86 ILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGENYRGKE 165 (243)
T ss_dssp HHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCCCEEHHH
T ss_pred HHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHHcCCCCCHHH
Confidence 2 48999997 79999999999999999999999999999999999999999999999
Q ss_pred HHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhc
Q psy7339 166 ALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRD 213 (223)
Q Consensus 166 A~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~ 213 (223)
|+++||||+|+|++++.+++.+++++++..||.+++.+|+.+++....
T Consensus 166 A~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~ 213 (243)
T 2q35_A 166 LAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLVALKQHLSADIKA 213 (243)
T ss_dssp HHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999876543
No 54
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=100.00 E-value=9.5e-35 Score=243.43 Aligned_cols=177 Identities=16% Similarity=0.101 Sum_probs=153.3
Q ss_pred cce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCC-------CcCCCCCCCcchhhh----------
Q psy7339 35 DHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCR-------AGIEPPPSCLPGERL---------- 96 (223)
Q Consensus 35 d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~-------~F~aG~~~~~~~~~~---------- 96 (223)
|+| ...+++|+..|..+..|+.||.++++.++.|+++++|||+|.|+ .||+|.|+.......
T Consensus 65 ~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~~~~~~~~~~~~ 144 (334)
T 3t8b_A 65 DATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTAD 144 (334)
T ss_dssp SSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC-------------
T ss_pred CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcccccccccccch
Confidence 788 88899999999999999999999999999999999999999996 899998886531100
Q ss_pred --h---HHHHhHHHHhhhh-hcccceee------------------------ecceeeccccccccCCCCccccchhhhc
Q psy7339 97 --D---HYARTTEQVKNRV-LLNHPVFV------------------------LQATFHTPFTLRGMTPEGCSSVLFPRIF 146 (223)
Q Consensus 97 --~---~~~~~~~~~~~~~-~~~~p~ia------------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 146 (223)
+ .+......+...+ .+|+|+|| ++++|++||+++|++|++|++++|++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p~~gg~~~L~r~v 224 (334)
T 3t8b_A 145 TVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQV 224 (334)
T ss_dssp ---------CCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSSCCSCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCCcccHHHHHHHHh
Confidence 0 0111122233333 38999996 5899999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHH
Q psy7339 147 GNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGIL 211 (223)
Q Consensus 147 g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~ 211 (223)
|+.+|++++++|++|+|+||+++||||+|||++++++++.++|++|+..||.+++.+|++++...
T Consensus 225 G~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a~~~~K~~l~~~~ 289 (334)
T 3t8b_A 225 GQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLD 289 (334)
T ss_dssp HHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999998763
No 55
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=5.3e-35 Score=237.25 Aligned_cols=183 Identities=16% Similarity=0.143 Sum_probs=157.3
Q ss_pred eccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh-----hhHHH--Hh
Q psy7339 31 FRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER-----LDHYA--RT 102 (223)
Q Consensus 31 ~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~-----~~~~~--~~ 102 (223)
++ -|+| +..+++|+..|..+..|+.||.++++.+++|+++++||++|.|+.||+|.|+...... .+.+. ..
T Consensus 4 ~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 82 (253)
T 1uiy_A 4 VE-KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHSLS 82 (253)
T ss_dssp EE-CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHH
T ss_pred EE-eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHHHHH
Confidence 44 5778 7788999999999999999999999999999999999999999999999998642211 10111 10
Q ss_pred HHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcC
Q psy7339 103 TEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTG 158 (223)
Q Consensus 103 ~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g 158 (223)
...+...+ .+|+|+|+ ++++|++||+++|++|++| +++|++++|+.+|++++++|
T Consensus 83 ~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l~ltg 161 (253)
T 1uiy_A 83 LMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDLLLTG 161 (253)
T ss_dssp HHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHHHHhC
Confidence 23333333 49999997 7999999999999999999 99999999999999999999
Q ss_pred CCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 159 RKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 159 ~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......+
T Consensus 162 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~ 218 (253)
T 1uiy_A 162 RLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGL 218 (253)
T ss_dssp CEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHGGGSCH
T ss_pred CccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCH
Confidence 999999999999999999999999999999999999999999999999988655443
No 56
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=100.00 E-value=5.8e-35 Score=238.01 Aligned_cols=189 Identities=13% Similarity=0.122 Sum_probs=161.7
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcC-CC-CCcCCCCCCCcchhh----hhHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDE-LC-RAGIEPPPSCLPGER----LDHY 99 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~-~g-~~F~aG~~~~~~~~~----~~~~ 99 (223)
+...++..|+| +..+++|+..|..+..|+.||.++++.++.|+ +++||++| .| +.||+|.|+...... ...+
T Consensus 4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~~~~~ 82 (261)
T 1ef8_A 4 QYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYD 82 (261)
T ss_dssp SSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CTTCTT
T ss_pred ceEEEEEeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchhHHHH
Confidence 34566777888 78889999999999999999999999999999 99999999 99 999999888643210 1101
Q ss_pred HHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHH
Q psy7339 100 ARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELL 155 (223)
Q Consensus 100 ~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ 155 (223)
.....+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++
T Consensus 83 -~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ 161 (261)
T 1ef8_A 83 -DPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKELI 161 (261)
T ss_dssp -SHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHHH
T ss_pred -HHHHHHHHHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHHHHHHHH
Confidence 1112222223 49999997 7999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCcCc
Q psy7339 156 YTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGHAT 217 (223)
Q Consensus 156 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~ 217 (223)
++|+.++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++......++.
T Consensus 162 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~ 223 (261)
T 1ef8_A 162 FTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMN 223 (261)
T ss_dssp HHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCCCCC
T ss_pred HcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999876665544
No 57
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=100.00 E-value=4.5e-35 Score=241.47 Aligned_cols=186 Identities=12% Similarity=0.080 Sum_probs=158.6
Q ss_pred CCcceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCC-cCCCCCCCcchhhhh------
Q psy7339 26 ASLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRA-GIEPPPSCLPGERLD------ 97 (223)
Q Consensus 26 a~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~-F~aG~~~~~~~~~~~------ 97 (223)
.+...++.-|+| ...+++|+ .|..+..|+.||.++++.++.|+++++||++|.|+. ||+|.|+........
T Consensus 7 ~~~v~~~~~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~ 85 (289)
T 3h0u_A 7 YETIKARLDGTVLSATFNAPP-MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAG 85 (289)
T ss_dssp CSSEEEEEETTEEEEEECCTT-TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTS
T ss_pred CCeEEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhH
Confidence 355677788999 78888887 899999999999999999999999999999999965 556668765322111
Q ss_pred -HHHHhHHHHhhhh-hcccceee-----------------------ec-ceeeccccccccCCCCccccchhhhcCHHHH
Q psy7339 98 -HYARTTEQVKNRV-LLNHPVFV-----------------------LQ-ATFHTPFTLRGMTPEGCSSVLFPRIFGNSVA 151 (223)
Q Consensus 98 -~~~~~~~~~~~~~-~~~~p~ia-----------------------~~-a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a 151 (223)
.+...+..+...+ .+|+|+|| ++ ++|++||+++|++|++|++++|++++|+.+|
T Consensus 86 ~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A 165 (289)
T 3h0u_A 86 GPGDASLGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRA 165 (289)
T ss_dssp STTCCSHHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHHH
Confidence 1111222333333 39999997 66 9999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHh
Q psy7339 152 SELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILR 212 (223)
Q Consensus 152 ~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~ 212 (223)
++++++|++++|+||+++||||+|+|++++++++.++|++|+..||.+++.+|+++++...
T Consensus 166 ~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~~~ 226 (289)
T 3h0u_A 166 LEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALIAAKSAINAISL 226 (289)
T ss_dssp HHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999999999998755
No 58
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=100.00 E-value=7.2e-34 Score=238.74 Aligned_cols=183 Identities=13% Similarity=0.099 Sum_probs=154.6
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhh----------
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERL---------- 96 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~---------- 96 (223)
...++.-++| ...+++|+..|..+..|+.||.++++.++.|+++++|||+|.|+.||+|.|+.......
T Consensus 36 ~i~~e~~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~~~~~~ 115 (333)
T 3njd_A 36 TMTYEVTDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGGSPYE 115 (333)
T ss_dssp SEEEEEETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC---------------CCT
T ss_pred eEEEEEECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhcccccccccccc
Confidence 4667778899 88899999999999999999999999999999999999999999999998876521110
Q ss_pred ------------------------hHHHHhHHHHhhhh-hcccceee-----------------------ecceeecccc
Q psy7339 97 ------------------------DHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFT 128 (223)
Q Consensus 97 ------------------------~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~ 128 (223)
..+...+..+...+ .+++|+|| ++++|++||+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~f~~pe~ 195 (333)
T 3njd_A 116 GTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPM 195 (333)
T ss_dssp TSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCEEECGGG
T ss_pred cccccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCeeechhh
Confidence 01112222222223 49999997 7999999999
Q ss_pred ccccCCCCccccchhhhcCHHHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHH
Q psy7339 129 LRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMR 208 (223)
Q Consensus 129 ~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~ 208 (223)
++|++|+++ ++++++|+.+|++++++|++|+|+||+++||||+|||++++++++.++|++|+..||.+++.+|++++
T Consensus 196 ~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al~~~K~~l~ 272 (333)
T 3njd_A 196 RVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLIMAKLACN 272 (333)
T ss_dssp GTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred ceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 999999876 68999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhc
Q psy7339 209 GILRD 213 (223)
Q Consensus 209 ~~~~~ 213 (223)
+....
T Consensus 273 ~~~~~ 277 (333)
T 3njd_A 273 TALLN 277 (333)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 87654
No 59
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=100.00 E-value=1.3e-34 Score=238.07 Aligned_cols=186 Identities=12% Similarity=0.094 Sum_probs=157.7
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchh-----------
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGE----------- 94 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~----------- 94 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+.....
T Consensus 9 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~ 88 (280)
T 1pjh_A 9 EKISYRIEGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPS 88 (280)
T ss_dssp TTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSS
T ss_pred CceEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhcccccccchhh
Confidence 34666777889 778999999999999999999999999999999999999999999999988753210
Q ss_pred hhhHHH-Hh---HHHHhhhh-hcccceee------------------------ecceeeccccccccCCCCccccchhhh
Q psy7339 95 RLDHYA-RT---TEQVKNRV-LLNHPVFV------------------------LQATFHTPFTLRGMTPEGCSSVLFPRI 145 (223)
Q Consensus 95 ~~~~~~-~~---~~~~~~~~-~~~~p~ia------------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 145 (223)
....+. .. ...+...+ .+|+|+|+ ++++|++||+++|++|++|++++|+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~~l~r~ 168 (280)
T 1pjh_A 89 ETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLK 168 (280)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHHHHHHH
Confidence 011111 11 12222333 48999996 589999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCccccccCCh-----hHHHhHH-HHHHHHhhcchHHHHHHHHHHHhHHh
Q psy7339 146 FGNSVASELLYTGRKLNAQEALQYGFVSGVFTTE-----EIERDLW-PRIHAWAKLSSCIVSLLAHLMRGILR 212 (223)
Q Consensus 146 vg~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~-----~l~~~a~-~~a~~l~~~~~~a~~~~K~~l~~~~~ 212 (223)
+|+.+|++++++|++++|+||+++||||+|+|++ ++++++. +++++|+..||.+++.+|++++....
T Consensus 169 vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~~~K~~l~~~~~ 241 (280)
T 1pjh_A 169 FGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHI 241 (280)
T ss_dssp HCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTH
T ss_pred hCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhHH
Confidence 9999999999999999999999999999999985 7888885 99999999999999999999987543
No 60
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=100.00 E-value=3.4e-34 Score=234.81 Aligned_cols=181 Identities=21% Similarity=0.187 Sum_probs=155.4
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCC-CcCCCCCCCcchhhh----hHH-H
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCR-AGIEPPPSCLPGERL----DHY-A 100 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~-~F~aG~~~~~~~~~~----~~~-~ 100 (223)
...++.-|+| ...+++++..|..+..|+.||.++++.++.|+++++||++|.|+ .||+|.|+....... +.+ .
T Consensus 14 ~i~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~~~ 93 (273)
T 2uzf_A 14 EIKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPR 93 (273)
T ss_dssp SEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------CCSSSCC
T ss_pred eEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccchhhhHHH
Confidence 3556677888 78889999999999999999999999999999999999999998 999999886532100 000 0
Q ss_pred HhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHH
Q psy7339 101 RTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLY 156 (223)
Q Consensus 101 ~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l 156 (223)
.....+...+ .+++|+|| ++++|++||+++|++|++|++++|++++|+.+|+++++
T Consensus 94 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~l 173 (273)
T 2uzf_A 94 LNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWY 173 (273)
T ss_dssp CTHHHHHHHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHHHHHHH
Confidence 0011222223 38999997 79999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHH
Q psy7339 157 TGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMR 208 (223)
Q Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~ 208 (223)
+|+.++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++
T Consensus 174 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~ 225 (273)
T 2uzf_A 174 LCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMN 225 (273)
T ss_dssp TCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred hCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998
No 61
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=100.00 E-value=1.2e-35 Score=242.55 Aligned_cols=186 Identities=13% Similarity=0.082 Sum_probs=158.9
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC-CCcCCCCCCCcchhh----hhHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC-RAGIEPPPSCLPGER----LDHYA 100 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g-~~F~aG~~~~~~~~~----~~~~~ 100 (223)
+...++..++| ...+++|+..|..+..|+.||.++++.+++|+++++||++|.| +.||+|.|+...... ...+.
T Consensus 9 ~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 88 (267)
T 3r9t_A 9 PGALAERRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDHP 88 (267)
T ss_dssp CSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTCG
T ss_pred CcEEEEEECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHHH
Confidence 34667778899 8889999999999999999999999999999999999999999 699999887532110 00000
Q ss_pred Hh-HHHHhhhhhcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHH
Q psy7339 101 RT-TEQVKNRVLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLY 156 (223)
Q Consensus 101 ~~-~~~~~~~~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l 156 (223)
.. ...+ ....+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|+++++
T Consensus 89 ~~~~~~~-~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~l 167 (267)
T 3r9t_A 89 EWGFAGY-VRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLL 167 (267)
T ss_dssp GGCGGGT-TTCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHHHHHH
T ss_pred hHHHHHH-HHHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHHHHHH
Confidence 00 0111 11258999997 79999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHH---HHhHHhc
Q psy7339 157 TGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHL---MRGILRD 213 (223)
Q Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~---l~~~~~~ 213 (223)
+|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|++ ++.....
T Consensus 168 tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~l~~~~~~ 227 (267)
T 3r9t_A 168 TGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIAYGVDDGVVV 227 (267)
T ss_dssp HCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHTTEETTEEG
T ss_pred cCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999 7765433
No 62
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=100.00 E-value=1.8e-34 Score=234.90 Aligned_cols=183 Identities=14% Similarity=0.070 Sum_probs=156.5
Q ss_pred eeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCC-CCCcCCCCCCCcch----hhhhHHHHhH
Q psy7339 30 EFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDEL-CRAGIEPPPSCLPG----ERLDHYARTT 103 (223)
Q Consensus 30 ~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~-g~~F~aG~~~~~~~----~~~~~~~~~~ 103 (223)
.++.-|+| ...+++|+ .|..+..|+.||.++++.++.|+++++||++|. |+.||+|.|+.... .....+...+
T Consensus 8 ~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 86 (260)
T 1sg4_A 8 EPDAGAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAV 86 (260)
T ss_dssp EEETTTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHHHH
T ss_pred EEEecCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHHHHHHH
Confidence 35556788 67778885 799999999999999999999999999999998 79999998886431 1122222223
Q ss_pred HHHhhhh-hcccceee----------------------e---cceeeccccccccCCCCccccchhhhcCHHHHHHHHHc
Q psy7339 104 EQVKNRV-LLNHPVFV----------------------L---QATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYT 157 (223)
Q Consensus 104 ~~~~~~~-~~~~p~ia----------------------~---~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~ 157 (223)
..+...+ .+|+|+|+ . +++|++||+++|++|++|++++|++++|+.+|++++++
T Consensus 87 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~lllt 166 (260)
T 1sg4_A 87 QELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQL 166 (260)
T ss_dssp HHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHHHHHc
Confidence 3333333 39999996 3 69999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhc
Q psy7339 158 GRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRD 213 (223)
Q Consensus 158 g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~ 213 (223)
|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.++.....
T Consensus 167 g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~ 222 (260)
T 1sg4_A 167 GLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKATAS 222 (260)
T ss_dssp TCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999876543
No 63
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=100.00 E-value=4.1e-34 Score=233.71 Aligned_cols=180 Identities=12% Similarity=0.105 Sum_probs=153.7
Q ss_pred cccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcch---hhh------hHHHHh
Q psy7339 33 LADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPG---ERL------DHYART 102 (223)
Q Consensus 33 ~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~---~~~------~~~~~~ 102 (223)
.-|+| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+.... ... ..+...
T Consensus 17 ~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 96 (267)
T 3oc7_A 17 TGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSAYDMAVERARE 96 (267)
T ss_dssp HSSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CHHHHHHHHHHH
T ss_pred eeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhhhhhHHHHHHH
Confidence 56788 88899999999999999999999999999999999999999999999998886532 000 112333
Q ss_pred HHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcC
Q psy7339 103 TEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTG 158 (223)
Q Consensus 103 ~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g 158 (223)
...+...+ .+|+|+|+ ++++|++||+++|++|++|++++++ ++|+.+|++++++|
T Consensus 97 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG~~~A~~l~ltg 175 (267)
T 3oc7_A 97 MAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLSARAAARYYLTG 175 (267)
T ss_dssp HHHHHHHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhCHHHHHHHHHcC
Confidence 33333333 49999997 7999999999999999999999999 99999999999999
Q ss_pred CCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 159 RKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 159 ~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
++++|+||+++||||+| ++++++++.+++++|+..||.+++.+|+++++.....+
T Consensus 176 ~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l 230 (267)
T 3oc7_A 176 EKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGSPQGLAASKALTTAAVLERF 230 (267)
T ss_dssp CCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCH
Confidence 99999999999999999 78999999999999999999999999999988755443
No 64
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=100.00 E-value=1.4e-33 Score=231.74 Aligned_cols=184 Identities=16% Similarity=0.140 Sum_probs=154.4
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh------hhHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER------LDHY 99 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~------~~~~ 99 (223)
+...++.-|+| +..+++|+..|..+..|+.||.++++.++.|+++++||++|.|+.||+|.|+...... ...+
T Consensus 20 ~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~ 99 (279)
T 3t3w_A 20 MYIDYDVSDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTLEFIY 99 (279)
T ss_dssp CSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCHHHHH
T ss_pred CeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccchHHHH
Confidence 35667888999 8889999999999999999999999999999999999999999999999888653221 1111
Q ss_pred ---HHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHH
Q psy7339 100 ---ARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVAS 152 (223)
Q Consensus 100 ---~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~ 152 (223)
...+..+...+ .+|+|+|+ ++++|++||+++|++ +.++.. +++++|+.+|+
T Consensus 100 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~-~~~~~~-~~~~vG~~~A~ 177 (279)
T 3t3w_A 100 AHESRRYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIG-GVEYHG-HTWELGPRKAK 177 (279)
T ss_dssp HHHHHHTHHHHHHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTCS-SCSSCC-HHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCCC-CchHHH-HHhhcCHHHHH
Confidence 11222222233 49999997 799999999999994 444443 49999999999
Q ss_pred HHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHh
Q psy7339 153 ELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILR 212 (223)
Q Consensus 153 ~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~ 212 (223)
+++++|++++|+||+++||||+|+|++++++++.+++++|+..||.+++.+|+.+++...
T Consensus 178 ~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~ 237 (279)
T 3t3w_A 178 EILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALRQAKRAVNQTLD 237 (279)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999988754
No 65
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-34 Score=233.43 Aligned_cols=178 Identities=15% Similarity=0.111 Sum_probs=152.0
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQ 105 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~ 105 (223)
+...++..|+| ...+++|+..|..+.+|+.||.++++.+++| ++++||++|.|+.||+|.|+..... ...+.+....
T Consensus 21 ~~i~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~~-~~~~~~~~~~ 98 (264)
T 3he2_A 21 SMIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAF-AADYPDRLIE 98 (264)
T ss_dssp -CEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCTT-GGGHHHHHHH
T ss_pred CeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccchh-hHHHHHHHHH
Confidence 45667888899 8889999999999999999999999999988 9999999999999999998873221 1222233333
Q ss_pred Hhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCC
Q psy7339 106 VKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKL 161 (223)
Q Consensus 106 ~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~ 161 (223)
+...+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|+++
T Consensus 99 ~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~llltG~~i 178 (264)
T 3he2_A 99 LHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKL 178 (264)
T ss_dssp HHHHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHHHCCCE
T ss_pred HHHHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHHHHHcCCCc
Confidence 33333 39999997 7999999999999999999999999999999999999999999
Q ss_pred CHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhH
Q psy7339 162 NAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGI 210 (223)
Q Consensus 162 ~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~ 210 (223)
+|+||+++||||+|++ .+++.++|++|+..||.+++.+|++++..
T Consensus 179 ~A~eA~~~GLV~~v~~----~~~a~~~A~~la~~~p~a~~~~K~~l~~~ 223 (264)
T 3he2_A 179 TAEIALHTGMANRIGT----LADAQAWAAEIARLAPLAIQHAKRVLNDD 223 (264)
T ss_dssp EHHHHHHHTSCSEECC----HHHHHHHHHHHHTSCHHHHHHHHHHHHTS
T ss_pred cHHHHHHCCCeEEEec----HHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Confidence 9999999999999986 46789999999999999999999999875
No 66
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.1e-33 Score=239.13 Aligned_cols=187 Identities=12% Similarity=0.086 Sum_probs=159.1
Q ss_pred cCCcceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC-CCcCCCCCCCcchh-------h
Q psy7339 25 PASLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC-RAGIEPPPSCLPGE-------R 95 (223)
Q Consensus 25 pa~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g-~~F~aG~~~~~~~~-------~ 95 (223)
..+...+++-|+| +..+|+|+..|..+..|+.+|.++++.+++|+++++||++|.| ++||+|.|+..... .
T Consensus 7 ~~e~vl~e~~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 86 (353)
T 4hdt_A 7 KNEDVLVNVEGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAE 86 (353)
T ss_dssp -CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHH
T ss_pred CCCcEEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHH
Confidence 3466778889999 8899999999999999999999999999999999999999998 79999998854211 1
Q ss_pred hhHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHH
Q psy7339 96 LDHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVA 151 (223)
Q Consensus 96 ~~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a 151 (223)
...+......+...+ .+|+|+|+ ++++|++||+++|++|++|++++|+|++| ++|
T Consensus 87 ~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~~a 165 (353)
T 4hdt_A 87 ARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-KLG 165 (353)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-THH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-HHH
Confidence 122222223333333 49999997 79999999999999999999999999998 689
Q ss_pred HHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHH------------------------------------------
Q psy7339 152 SELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRI------------------------------------------ 189 (223)
Q Consensus 152 ~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a------------------------------------------ 189 (223)
+++++||++++|+||+++||||+|||++++++.+.+++
T Consensus 166 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~i~~~ 245 (353)
T 4hdt_A 166 LHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDTVADIIAA 245 (353)
T ss_dssp HHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSSHHHHHHH
T ss_pred HHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCCHHHHHHH
Confidence 99999999999999999999999999999998887764
Q ss_pred -------------HHHhhcchHHHHHHHHHHHhHHh
Q psy7339 190 -------------HAWAKLSSCIVSLLAHLMRGILR 212 (223)
Q Consensus 190 -------------~~l~~~~~~a~~~~K~~l~~~~~ 212 (223)
+.|++++|.+++.+|+.+++...
T Consensus 246 L~~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~ 281 (353)
T 4hdt_A 246 LRAHDAPAAGEAADLIATRSPIALSVTLESVRRAAK 281 (353)
T ss_dssp HHHHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTT
T ss_pred HHhcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc
Confidence 45889999999999999987654
No 67
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=100.00 E-value=5.8e-34 Score=236.61 Aligned_cols=184 Identities=9% Similarity=0.029 Sum_probs=152.3
Q ss_pred eccccce-eeecccccccc----cccchHHHHHHHHHHHHHhc-----CCCeEEEEcCCCCCcCCCCCCCcchhh-----
Q psy7339 31 FRLADHI-YTRIGFNDSIE----CNASTFALEMKEIAHIIQFL-----TPRSLILVDELCRAGIEPPPSCLPGER----- 95 (223)
Q Consensus 31 ~~~~d~I-~~~~~~~~~~~----~~~s~~~~el~~~~~~l~~~-----~~~~vvvl~~~g~~F~aG~~~~~~~~~----- 95 (223)
+..-++| +..+++++..| ..+..|+.||.++++.++.+ +++++||++|.|+.||+|.|+......
T Consensus 36 ~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~ 115 (305)
T 3m6n_A 36 EEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGD 115 (305)
T ss_dssp EETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHHHHHHHTC
T ss_pred EEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHHhcccccc
Confidence 3567888 78888776644 68899999999999999874 789999999999999999998653211
Q ss_pred ---hhHH----HHhHHHHhhhhhcccceee-----------------------ecceeeccccccccCCCCccccchhhh
Q psy7339 96 ---LDHY----ARTTEQVKNRVLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRI 145 (223)
Q Consensus 96 ---~~~~----~~~~~~~~~~~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 145 (223)
...+ ...+..+...+.+|+|+|| ++++|++||+++|++|++|++++|+++
T Consensus 116 ~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~ 195 (305)
T 3m6n_A 116 RARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQR 195 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCccHHHHHHHH
Confidence 1111 1112222222348999997 799999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 146 FGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 146 vg~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
+|+.+|++++++|++|+|+||+++||||+|+|++++++++.++|++|+. +|.+++.+|+.++......+
T Consensus 196 vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~a~~~~K~~l~~~~~~~l 264 (305)
T 3m6n_A 196 ISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-TPHAWAAMQQVREMTTAVPL 264 (305)
T ss_dssp SCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-CHHHHHHHHHHHHTTTCCCH
T ss_pred hcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-ChHHHHHHHHHHHhhhcCCH
Confidence 9999999999999999999999999999999999999999999999986 88999999999988655443
No 68
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=100.00 E-value=4.3e-34 Score=234.08 Aligned_cols=182 Identities=14% Similarity=0.127 Sum_probs=155.0
Q ss_pred ccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC-CCcCCCCCCCcch----hhhhHHHHhHHHHh
Q psy7339 34 ADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC-RAGIEPPPSCLPG----ERLDHYARTTEQVK 107 (223)
Q Consensus 34 ~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g-~~F~aG~~~~~~~----~~~~~~~~~~~~~~ 107 (223)
-|+| +..+++|+..|..+..|+.+|.++++.+++|+++++||++|.| +.||+|.|+.... .....+...+..+.
T Consensus 19 ~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 98 (272)
T 1hzd_A 19 NRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVI 98 (272)
T ss_dssp GTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHHHHHHHHHHHHHH
Confidence 4678 7888999999999999999999999999999999999999998 7999998875421 11122222233333
Q ss_pred hhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCCCH
Q psy7339 108 NRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNA 163 (223)
Q Consensus 108 ~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a 163 (223)
..+ .+|+|+|+ ++++|++||+++|++|++|++++|++++|+.+|++++++|++++|
T Consensus 99 ~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ltg~~~~a 178 (272)
T 1hzd_A 99 NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDG 178 (272)
T ss_dssp HHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEH
T ss_pred HHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHHHHHHHHcCCcCCH
Confidence 333 39999997 799999999999999999999999999999999999999999999
Q ss_pred HHHHHcCccccccCChhH----HHhHHHHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 164 QEALQYGFVSGVFTTEEI----ERDLWPRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 164 ~eA~~~Glv~~v~~~~~l----~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
+||+++||||+|+|++++ .+.+.+++++++..||.+++.+|+.++......+
T Consensus 179 ~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~ 234 (272)
T 1hzd_A 179 KEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDL 234 (272)
T ss_dssp HHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCH
Confidence 999999999999998875 4578899999999999999999999987655433
No 69
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=100.00 E-value=6.5e-33 Score=226.28 Aligned_cols=180 Identities=11% Similarity=0.078 Sum_probs=150.3
Q ss_pred Ccceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh------hhHH
Q psy7339 27 SLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER------LDHY 99 (223)
Q Consensus 27 ~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~------~~~~ 99 (223)
+...++.-|+| ...+++|+..|..+..|+.||.++++.++++ ++++||++|.|+.||+|.|+...... ...+
T Consensus 7 ~~i~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 85 (267)
T 3hp0_A 7 QTIKVRFQASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQASS 85 (267)
T ss_dssp SSEEEEEETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCSCCC
T ss_pred ceEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHHHHHH
Confidence 45667778899 8889999999999999999999999999985 69999999999999999887542211 0011
Q ss_pred HHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHH
Q psy7339 100 ARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELL 155 (223)
Q Consensus 100 ~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ 155 (223)
......+...+ .+|+|+|+ ++++|++||+++|++|++| +++|++++|+.+|++++
T Consensus 86 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~A~ell 164 (267)
T 3hp0_A 86 QEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQKAHYMT 164 (267)
T ss_dssp CHHHHHHHHHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHHHHHHH
Confidence 11122222223 39999997 7999999999999999875 67899999999999999
Q ss_pred HcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhH
Q psy7339 156 YTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGI 210 (223)
Q Consensus 156 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~ 210 (223)
++|++++|+||+++||||+|+|+++ +.+.+++++|+..||.+++.+|++++..
T Consensus 165 ltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~p~a~~~~K~~l~~~ 217 (267)
T 3hp0_A 165 LMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLNKKGIAHYKQFMSSL 217 (267)
T ss_dssp HHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 9999999999999999999998654 3578999999999999999999999875
No 70
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=100.00 E-value=1e-32 Score=223.73 Aligned_cols=176 Identities=15% Similarity=0.078 Sum_probs=152.6
Q ss_pred ceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhh-----hhHHHHh
Q psy7339 29 AEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGER-----LDHYART 102 (223)
Q Consensus 29 ~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~-----~~~~~~~ 102 (223)
..++.-|+| ...+++|+..|..+..|+.||.++++.+++ +++++||++|.|+.||+|.|+...... ...+. .
T Consensus 9 v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~-~ 86 (254)
T 3isa_A 9 LAIERRPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMV-R 86 (254)
T ss_dssp EEEEECSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHH-H
T ss_pred EEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchhHHHHHH-H
Confidence 667778899 888899999999999999999999999987 689999999999999999888653221 11111 2
Q ss_pred HHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcC
Q psy7339 103 TEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTG 158 (223)
Q Consensus 103 ~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g 158 (223)
...+...+ .+|+|+|+ ++++|++||+++|++| ++++|++++|..+|++++++|
T Consensus 87 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l~ltg 163 (254)
T 3isa_A 87 IEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSILGSA 163 (254)
T ss_dssp HHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHHHHhC
Confidence 22333333 49999997 7999999999999998 478999999999999999999
Q ss_pred CCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHh
Q psy7339 159 RKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRG 209 (223)
Q Consensus 159 ~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~ 209 (223)
++++|+||+++||||+|+|++++++++.+++++++..||.+++.+|+.++.
T Consensus 164 ~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~ 214 (254)
T 3isa_A 164 RAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRATLHRVLRD 214 (254)
T ss_dssp CEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHHHHHHHHSC
T ss_pred CCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999853
No 71
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=100.00 E-value=2.8e-33 Score=237.60 Aligned_cols=191 Identities=13% Similarity=0.095 Sum_probs=158.7
Q ss_pred ccCCcceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC-CCcCCCCCCCcchhh------
Q psy7339 24 VPASLAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC-RAGIEPPPSCLPGER------ 95 (223)
Q Consensus 24 vpa~~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g-~~F~aG~~~~~~~~~------ 95 (223)
.+.+...++.-++| ...+++|+..|..+..|+.||.++++.++.|+++++||++|.| +.||+|.|+......
T Consensus 3 ~~~~~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~ 82 (363)
T 3bpt_A 3 DAAEEVLLGKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQK 82 (363)
T ss_dssp CCCCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCC
T ss_pred CCCcceEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccH
Confidence 34556667778889 7889999999999999999999999999999999999999998 999999888542111
Q ss_pred -hhHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHH
Q psy7339 96 -LDHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSV 150 (223)
Q Consensus 96 -~~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~ 150 (223)
...+......+...+ .+|+|+|| ++++|++||+++|++|++|++++|++++|. +
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~ 161 (363)
T 3bpt_A 83 IAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-L 161 (363)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-H
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-H
Confidence 112222122233333 49999997 799999999999999999999999999997 9
Q ss_pred HHHHHHcCCCCCHHHHHHcCccccccCChhHHHhH---------------------------------------------
Q psy7339 151 ASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDL--------------------------------------------- 185 (223)
Q Consensus 151 a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a--------------------------------------------- 185 (223)
|+++++||++++|+||+++||||+|+|++++.+.+
T Consensus 162 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~ 241 (363)
T 3bpt_A 162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSC 241 (363)
T ss_dssp HHHHHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHHH
Confidence 99999999999999999999999999998876432
Q ss_pred ------H---------------HHHHHHhhcchHHHHHHHHHHHhHHhcCc
Q psy7339 186 ------W---------------PRIHAWAKLSSCIVSLLAHLMRGILRDGH 215 (223)
Q Consensus 186 ------~---------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~ 215 (223)
. +++++|+..||.+++.+|+++++.....+
T Consensus 242 f~~~~~~ei~~al~~~~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l 292 (363)
T 3bpt_A 242 FSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTL 292 (363)
T ss_dssp TTSSSHHHHHHHHHHHCCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCH
T ss_pred hCCCCHHHHHHHHhccChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCH
Confidence 2 57889999999999999999998755443
No 72
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=100.00 E-value=7.4e-33 Score=237.61 Aligned_cols=188 Identities=12% Similarity=0.026 Sum_probs=156.7
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC-CCcCCCCCCCcchhh----------
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC-RAGIEPPPSCLPGER---------- 95 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g-~~F~aG~~~~~~~~~---------- 95 (223)
...+..-++| ...+++|+..|..+..|+.+|.++++.++.|+++++||++|.| ++||+|.|+......
T Consensus 43 ~v~~~~~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~~~ 122 (407)
T 3ju1_A 43 TLATASGKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTE 122 (407)
T ss_dssp EEECTTSCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSCCH
T ss_pred eEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccccHH
Confidence 3456667889 8889999999999999999999999999999999999999999 899999998653211
Q ss_pred -hhHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHH
Q psy7339 96 -LDHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSV 150 (223)
Q Consensus 96 -~~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~ 150 (223)
...+......+...+ .+|+|+|| ++++|++||+++|++|++|++++|++++| .+
T Consensus 123 ~~~~~~~~~~~l~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g-~~ 201 (407)
T 3ju1_A 123 VAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG-KM 201 (407)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST-TH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH-HH
Confidence 122222222333333 49999997 79999999999999999999999999999 99
Q ss_pred HHHHHHcCCCCCHHHHHHcCccccccCChhHHH---h----------------HHH------------------------
Q psy7339 151 ASELLYTGRKLNAQEALQYGFVSGVFTTEEIER---D----------------LWP------------------------ 187 (223)
Q Consensus 151 a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~---~----------------a~~------------------------ 187 (223)
|+++++||++|+|+||+++||||+|||++++.+ + +.+
T Consensus 202 A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~~~~ 281 (407)
T 3ju1_A 202 GLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQEM 281 (407)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHTHHH
T ss_pred HHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHHHHH
Confidence 999999999999999999999999999988776 3 322
Q ss_pred ------------------------H----HHHHhhcchHHHHHHHHHHHhHHhcCcC
Q psy7339 188 ------------------------R----IHAWAKLSSCIVSLLAHLMRGILRDGHA 216 (223)
Q Consensus 188 ------------------------~----a~~l~~~~~~a~~~~K~~l~~~~~~~~~ 216 (223)
| +++|+..||.+++.+|+++++.....++
T Consensus 282 I~~~f~~sv~~i~~~L~~~~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~ 338 (407)
T 3ju1_A 282 IDRLMAGSLTDIVTRMSTLSTDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLA 338 (407)
T ss_dssp HHHHTCSCHHHHHHHHHHCCCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHH
T ss_pred HHHHhcCCHHHHHHHHHhcccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHH
Confidence 2 4788999999999999999987555443
No 73
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=99.96 E-value=1.3e-30 Score=224.15 Aligned_cols=180 Identities=12% Similarity=0.110 Sum_probs=149.5
Q ss_pred cceeccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCC--------C-CCcCCCCCCCcchh---
Q psy7339 28 LAEFRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDEL--------C-RAGIEPPPSCLPGE--- 94 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~--------g-~~F~aG~~~~~~~~--- 94 (223)
...++.-|+| +..+|+++..|..+..|+.||.++++.++.|+++++|||+|. | +.||+|.|+.....
T Consensus 168 ~v~~e~~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~~~ 247 (440)
T 2np9_A 168 AVHLERRDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQGGI 247 (440)
T ss_dssp SEEEEEETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTTCC
T ss_pred eEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhccCc
Confidence 4556777888 888999999999999999999999999999999999999994 6 89999988753211
Q ss_pred ---h--hhHHHHhHHHHhhh-------------hhcccceee-----------------------ecceeeccccccccC
Q psy7339 95 ---R--LDHYARTTEQVKNR-------------VLLNHPVFV-----------------------LQATFHTPFTLRGMT 133 (223)
Q Consensus 95 ---~--~~~~~~~~~~~~~~-------------~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~ 133 (223)
. .......++.+... ..++||+|+ ++++|++||+++|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~lGl~ 327 (440)
T 2np9_A 248 SLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGII 327 (440)
T ss_dssp CTTTTHHHHHHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTTCCC
T ss_pred chhhhhhHHHHHHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhccCcC
Confidence 0 00100111222211 148999997 799999999999999
Q ss_pred CCCccccchhhhcCHHHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHH
Q psy7339 134 PEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGIL 211 (223)
Q Consensus 134 p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~ 211 (223)
|++| +++|++++|..+|++++++|++|+|+||+++||||+|||++++++++.+++++++ +.+++.+|++++...
T Consensus 328 P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la---~~Av~~~K~~l~~~~ 401 (440)
T 2np9_A 328 PGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLD---GDAVLANRRMLNLAD 401 (440)
T ss_dssp CTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTC---SHHHHHHHHHHHHHH
T ss_pred cchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhC---HHHHHHHHHHHHhhh
Confidence 9887 6899999999999999999999999999999999999999999999999998774 578999999998753
No 74
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=99.96 E-value=3.2e-31 Score=230.29 Aligned_cols=185 Identities=10% Similarity=0.086 Sum_probs=156.3
Q ss_pred cceeccccce-eeeccccc----------ccccccchHHHHHHHHHHHHHhc-CCCeEEEEcC-CCCCcCCCCCCCcchh
Q psy7339 28 LAEFRLADHI-YTRIGFND----------SIECNASTFALEMKEIAHIIQFL-TPRSLILVDE-LCRAGIEPPPSCLPGE 94 (223)
Q Consensus 28 ~~~~~~~d~I-~~~~~~~~----------~~~~~~s~~~~el~~~~~~l~~~-~~~~vvvl~~-~g~~F~aG~~~~~~~~ 94 (223)
...++.-++| ...+++++ ..|..+..|+.||.++++.++.| +++++||++| .|+.||+|.|+.....
T Consensus 22 ~v~ve~~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~el~~ 101 (556)
T 2w3p_A 22 HWKLSFNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGL 101 (556)
T ss_dssp SEEEEEETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHHHH
T ss_pred eEEEEeeCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHHHhh
Confidence 4556677888 77888887 78999999999999999999999 9999999999 8999999988854221
Q ss_pred ----hhhHHHHhHHHHhhhh-----hcccceee-----------------------ec--ceeeccccc-cccCCCCccc
Q psy7339 95 ----RLDHYARTTEQVKNRV-----LLNHPVFV-----------------------LQ--ATFHTPFTL-RGMTPEGCSS 139 (223)
Q Consensus 95 ----~~~~~~~~~~~~~~~~-----~~~~p~ia-----------------------~~--a~f~~pe~~-~Gl~p~~g~~ 139 (223)
....+.+..+.+...+ .+++|+|| ++ ++|++||++ +|++|++|++
T Consensus 102 ~~~~~~~~~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~Pg~Ggt 181 (556)
T 2w3p_A 102 STHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGGL 181 (556)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTTHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCCCccHH
Confidence 1112333333333344 49999997 66 999999999 9999999999
Q ss_pred cchh--hhcCHHHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcchHHHHHHHHHHHhHHhc
Q psy7339 140 VLFP--RIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLSSCIVSLLAHLMRGILRD 213 (223)
Q Consensus 140 ~~l~--~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~ 213 (223)
++|+ +++|..+|++++++|+.++|+||+++||||+|+|++++++++.++|++|+..||.+++. |+.++...+.
T Consensus 182 ~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~~-K~l~~~~l~r 256 (556)
T 2w3p_A 182 TRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAHA-QGVPLTRIER 256 (556)
T ss_dssp HHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTTC-CCCCCCCCCC
T ss_pred HHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHhh-hhhhcchhhh
Confidence 9999 99999999999999999999999999999999999999999999999999999998875 7766555433
No 75
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.96 E-value=1.9e-29 Score=230.07 Aligned_cols=162 Identities=17% Similarity=0.179 Sum_probs=139.5
Q ss_pred eccccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhh--hHHHHhHHHHh
Q psy7339 31 FRLADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERL--DHYARTTEQVK 107 (223)
Q Consensus 31 ~~~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~--~~~~~~~~~~~ 107 (223)
+.+-|+| +.++++|+ .|..+..|+.||.++++.+++|+++++||+||.|+.||+|.|+....... ..+.+.++.+.
T Consensus 25 ~~~~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~~~~~~~~~~i~ 103 (742)
T 3zwc_A 25 LRLPHSLAMIRLCNPP-VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPGLALGSLVDEIQ 103 (742)
T ss_dssp EECSTTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSCSHHHHHHHHHH
T ss_pred EEeeCCEEEEEeCCCc-ccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChhHHHHHHHHHHH
Confidence 4667999 88888885 79999999999999999999999999999999999999999886532211 12222222222
Q ss_pred hhhhcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCCCHH
Q psy7339 108 NRVLLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQ 164 (223)
Q Consensus 108 ~~~~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~ 164 (223)
.+++|+|| ++++|++||+++|++|++|++++|+|++|..+|++|++||++++|+
T Consensus 104 ---~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~~i~a~ 180 (742)
T 3zwc_A 104 ---RYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSAD 180 (742)
T ss_dssp ---HCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCCEEHH
T ss_pred ---hCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCCchhHH
Confidence 38999997 7999999999999999999999999999999999999999999999
Q ss_pred HHHHcCccccccCChhHHHhHHHHHHHHhhcch
Q psy7339 165 EALQYGFVSGVFTTEEIERDLWPRIHAWAKLSS 197 (223)
Q Consensus 165 eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~ 197 (223)
||+++||||+|+|++. .+++.++|++++..++
T Consensus 181 eA~~~GLv~~vv~~d~-~~~A~~~A~~ia~~~~ 212 (742)
T 3zwc_A 181 EALRLGILDAVVKSDP-VEEAIKFAQKIIDKPI 212 (742)
T ss_dssp HHHHHTSCSEEESSCH-HHHHHHHHHHHTTSCS
T ss_pred HHHHcCCccEecCchh-hHHHHHHHHHHhcCCc
Confidence 9999999999999775 5788999999998775
No 76
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.96 E-value=4e-29 Score=228.50 Aligned_cols=168 Identities=18% Similarity=0.134 Sum_probs=143.9
Q ss_pred Ccceec-cccce-eeeccccc-ccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCC-CcCCCCCCCcchh-------h
Q psy7339 27 SLAEFR-LADHI-YTRIGFND-SIECNASTFALEMKEIAHIIQFLTPRSLILVDELCR-AGIEPPPSCLPGE-------R 95 (223)
Q Consensus 27 ~~~~~~-~~d~I-~~~~~~~~-~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~-~F~aG~~~~~~~~-------~ 95 (223)
+...++ .-|+| ...+++++ ..|..+..|+.||.++++.+++|+++++||++| |+ .||+|.|+..... .
T Consensus 6 ~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~ 84 (715)
T 1wdk_A 6 KAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDAE 84 (715)
T ss_dssp SSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHHH
T ss_pred CeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHHH
Confidence 455666 66888 77788888 899999999999999999999999999999999 86 9999999864321 1
Q ss_pred hhHHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHH
Q psy7339 96 LDHYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVA 151 (223)
Q Consensus 96 ~~~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a 151 (223)
...+.+..+.+...+ .+++|+|| ++++|++||+++|++|++|++++|++++|..+|
T Consensus 85 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~A 164 (715)
T 1wdk_A 85 LIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNA 164 (715)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHHH
Confidence 112222333333344 39999997 799999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhc
Q psy7339 152 SELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKL 195 (223)
Q Consensus 152 ~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~ 195 (223)
++++++|++++|+||+++||||+|+|++++++++.+++++++..
T Consensus 165 ~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 208 (715)
T 1wdk_A 165 VEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISG 208 (715)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999876
No 77
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.96 E-value=1.4e-29 Score=231.67 Aligned_cols=166 Identities=13% Similarity=0.069 Sum_probs=138.8
Q ss_pred cceec-cccce-eeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCC-CcCCCCCCCcchhhh-------h
Q psy7339 28 LAEFR-LADHI-YTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELCR-AGIEPPPSCLPGERL-------D 97 (223)
Q Consensus 28 ~~~~~-~~d~I-~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~-~F~aG~~~~~~~~~~-------~ 97 (223)
...++ .-|+| ...++++ ..|..+..|+.||.++++.++.|+++++||++| |+ .||+|.|+....... .
T Consensus 8 ~i~~~~~~~~va~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~~~ 85 (725)
T 2wtb_A 8 KTVMEVGGDGVAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVKEPK 85 (725)
T ss_dssp EEEEEECTTSEEEEEEECT-TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------CCS
T ss_pred eEEEEEeeCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhhhHH
Confidence 34555 56788 7778888 899999999999999999999999999999999 86 999999986532211 1
Q ss_pred HHHHhHHHHhhhh-hcccceee-----------------------ecceeeccccccccCCCCccccchhhhcCHHHHHH
Q psy7339 98 HYARTTEQVKNRV-LLNHPVFV-----------------------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASE 153 (223)
Q Consensus 98 ~~~~~~~~~~~~~-~~~~p~ia-----------------------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 153 (223)
.+....+.+...+ .+++|+|| ++++|++||+++|++|++|++++|++++|..+|++
T Consensus 86 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~~A~~ 165 (725)
T 2wtb_A 86 AGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALE 165 (725)
T ss_dssp SSHHHHHCCCCCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHHHHHH
Confidence 1112222333333 39999997 79999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhc
Q psy7339 154 LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKL 195 (223)
Q Consensus 154 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~ 195 (223)
++++|++++|+||+++||||+|+|++++++++.+++++++..
T Consensus 166 l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~ 207 (725)
T 2wtb_A 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGR 207 (725)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTT
T ss_pred HHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999876
No 78
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.33 E-value=7.6e-13 Score=118.69 Aligned_cols=145 Identities=10% Similarity=-0.023 Sum_probs=105.1
Q ss_pred cce-eeeccccccccc--ccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhh
Q psy7339 35 DHI-YTRIGFNDSIEC--NASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVL 111 (223)
Q Consensus 35 d~I-~~~~~~~~~~~~--~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (223)
++| ...++.+...|. .+..+.+++.+.++.++.|+++++|||++.+. |.+... .+.+.+.+..+. .
T Consensus 301 ~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~sp----GG~~~~----~~~i~~~i~~l~---~ 369 (593)
T 3bf0_A 301 DSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSP----GGSVTA----SEVIRAELAAAR---A 369 (593)
T ss_dssp CEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEEE----EECHHH----HHHHHHHHHHHH---H
T ss_pred CCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecCC----CCCHHH----HHHHHHHHHHHH---h
Confidence 456 455555544444 35678999999999999999999999998653 333321 112222222222 2
Q ss_pred cccceee-----------------------ecceeecccc------------ccccCCCC-------------ccc----
Q psy7339 112 LNHPVFV-----------------------LQATFHTPFT------------LRGMTPEG-------------CSS---- 139 (223)
Q Consensus 112 ~~~p~ia-----------------------~~a~f~~pe~------------~~Gl~p~~-------------g~~---- 139 (223)
+++|||+ +++.|+.+++ ++|+.|.. +.+
T Consensus 370 ~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~~t~~~~ 449 (593)
T 3bf0_A 370 AGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQ 449 (593)
T ss_dssp TTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSCCCHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCCCCHHHH
Confidence 7899996 6888998875 58887632 222
Q ss_pred -----------cchhhhcCHHH-----HHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHH
Q psy7339 140 -----------VLFPRIFGNSV-----ASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIH 190 (223)
Q Consensus 140 -----------~~l~~~vg~~~-----a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~ 190 (223)
.++.+.++..+ +.+++++|+.++|+||+++||||++++.+++.+.+.+++.
T Consensus 450 ~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a~ 516 (593)
T 3bf0_A 450 LMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAK 516 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHcC
Confidence 46678888888 9999999999999999999999999998888887777554
No 79
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B*
Probab=99.30 E-value=1.7e-12 Score=122.52 Aligned_cols=99 Identities=38% Similarity=0.623 Sum_probs=78.2
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
|||||||||+||++.+|+|+|+|||++.+.++++|.|+++++..++...+.++|+.|+.++...+....+.++|++|+.+
T Consensus 799 gsGKSTlLr~iGl~~~~aqiG~~Vpq~~~~l~v~d~I~~rig~~d~~~~~~stf~~em~~~a~al~la~~~sLlLLDEp~ 878 (1022)
T 2o8b_B 799 MGGKSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDELG 878 (1022)
T ss_dssp TSSHHHHHHHHHHHHHHHTTTCCEESSEEEECCCSBEEEECC---------CHHHHHHHHHHHHHHHCCTTCEEEEECTT
T ss_pred CCChHHHHHHHHHHHHHhheeEEeccCcCCCCHHHHHHHHcCCHHHHhhchhhhHHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 89999999999999999999999999999999999999999999999889999999999988888888888999999999
Q ss_pred CCcCCCCCCCcchhhhhHH
Q psy7339 81 RAGIEPPPSCLPGERLDHY 99 (223)
Q Consensus 81 ~~F~aG~~~~~~~~~~~~~ 99 (223)
++++.-+......+.++++
T Consensus 879 ~Gtd~~dg~~~~~~il~~L 897 (1022)
T 2o8b_B 879 RGTATFDGTAIANAVVKEL 897 (1022)
T ss_dssp TTSCHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHH
Confidence 9888765443333344443
No 80
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Probab=99.29 E-value=2.2e-12 Score=120.65 Aligned_cols=100 Identities=40% Similarity=0.527 Sum_probs=80.0
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
|||||||+|+|+++.+|+|+|++||++...++++|+|+++++..++...+.|+|+.++.+....+....+.++|++|+.+
T Consensus 672 GsGKSTlLr~ial~~~~aq~G~~vpa~~~~~~~~d~i~~~ig~~d~l~~~lStf~~e~~~~a~il~~a~~~sLlLLDEp~ 751 (934)
T 3thx_A 672 MGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELG 751 (934)
T ss_dssp TSSHHHHHHHHHHHHHHHHHTCCBSEEEEEEECCSEEEEECC---------CHHHHHHHHHHHHHHHCCTTCEEEEESCS
T ss_pred CCCHHHHHHHHHHHHHHHhcCCccccccccchHHHHHHHhcCchhhHHHhHhhhHHHHHHHHHHHHhccCCcEEEEeCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999887888999999999
Q ss_pred CCcCCCCCCCcchhhhhHHH
Q psy7339 81 RAGIEPPPSCLPGERLDHYA 100 (223)
Q Consensus 81 ~~F~aG~~~~~~~~~~~~~~ 100 (223)
++.+..+...+....++++.
T Consensus 752 ~GlD~~~~~~i~~~il~~l~ 771 (934)
T 3thx_A 752 RGTSTYDGFGLAWAISEYIA 771 (934)
T ss_dssp CSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 98887655544444444443
No 81
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B*
Probab=99.18 E-value=1.4e-11 Score=114.83 Aligned_cols=99 Identities=43% Similarity=0.614 Sum_probs=77.3
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
|||||||||+|+.+.+++|.|+++|++.+.++++|+|+++++..+++..+.|+|..++.+....+....+.++|++|+.+
T Consensus 683 GaGKSTlLr~i~~i~~~aq~g~~vpa~~~~i~~~d~i~~~ig~~d~l~~~~stfs~em~~~~~il~~a~~p~LlLLDEP~ 762 (918)
T 3thx_B 683 MGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGRSTFMEELTDTAEIIRKATSQSLVILDELG 762 (918)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCBSSSEEEEECCSEEEEEC----------CCHHHHHHHHHHHHHHCCTTCEEEEESTT
T ss_pred CCchHHHHHHHHHHHHHhhcCccccchhhhhhHHHHHHHhCChHHHHHHhHHHhhHHHHHHHHHHHhccCCCEEEEeCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999888888999999999
Q ss_pred CCcCCCCCCCcchhhhhHH
Q psy7339 81 RAGIEPPPSCLPGERLDHY 99 (223)
Q Consensus 81 ~~F~aG~~~~~~~~~~~~~ 99 (223)
++.+..+...+....++++
T Consensus 763 ~GlD~~~~~~i~~~il~~L 781 (918)
T 3thx_B 763 RGTSTHDGIAIAYATLEYF 781 (918)
T ss_dssp TTSCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 8887654444433334433
No 82
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=99.18 E-value=3.1e-11 Score=111.45 Aligned_cols=98 Identities=39% Similarity=0.567 Sum_probs=75.9
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
|||||||+|+|+.+.+++|+|++||++..+++++|+++++++..+++..+.++|..|+.++...+....+.+++++|+.+
T Consensus 617 GsGKSTlLr~iagl~~~~q~G~~vpa~~~~i~~~~~i~~~~~~~d~l~~~~stf~~e~~~~~~il~~a~~psLlLLDEp~ 696 (800)
T 1wb9_A 617 MGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIG 696 (800)
T ss_dssp TSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCCTTEEEEEESCC
T ss_pred CCChHHHHHHHHHHHHHHhcCcccchhcccceeHHHHHhhCCHHHHHHhhhhhhhHHHHHHHHHHHhccCCCEEEEECCC
Confidence 89999999999999999999999999999999999999999999999988899999999988888888889999999999
Q ss_pred CCcCCCCCCCcchhhhhH
Q psy7339 81 RAGIEPPPSCLPGERLDH 98 (223)
Q Consensus 81 ~~F~aG~~~~~~~~~~~~ 98 (223)
+++++-+......+.+++
T Consensus 697 ~Gtd~~d~~~i~~~ll~~ 714 (800)
T 1wb9_A 697 RGTSTYDGLSLAWACAEN 714 (800)
T ss_dssp CCSSSSHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHHHHH
Confidence 999887555433333333
No 83
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.16 E-value=9.1e-11 Score=93.85 Aligned_cols=126 Identities=9% Similarity=-0.026 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhh-cccceee-------------
Q psy7339 53 TFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVL-LNHPVFV------------- 118 (223)
Q Consensus 53 ~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~ia------------- 118 (223)
....++.+.++.+++|+++++||+++. |+|.+... .+.+.+.+..+ .. ++||+|+
T Consensus 29 ~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~----~~~i~~~l~~~---~~~~~kPVia~v~g~a~~gG~~l 97 (240)
T 3rst_A 29 YNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYE----SAEIHKKLEEI---KKETKKPIYVSMGSMAASGGYYI 97 (240)
T ss_dssp CCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHH----HHHHHHHHHHH---HHHHCCCEEEEEEEEEETHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHH----HHHHHHHHHHH---HHhCCCeEEEEECCeehHhHHHH
Confidence 346899999999999999999999976 45554422 12222222222 12 5888886
Q ss_pred ----------ecceeecc---------------------ccccccCCCCcccc--------------------------c
Q psy7339 119 ----------LQATFHTP---------------------FTLRGMTPEGCSSV--------------------------L 141 (223)
Q Consensus 119 ----------~~a~f~~p---------------------e~~~Gl~p~~g~~~--------------------------~ 141 (223)
+++.|+.+ +++.|-.+..+..+ .
T Consensus 98 A~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va 177 (240)
T 3rst_A 98 STAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVIS 177 (240)
T ss_dssp HTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888888 55667666554321 1
Q ss_pred hhhhcCHHHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHH
Q psy7339 142 FPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIH 190 (223)
Q Consensus 142 l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~ 190 (223)
-.|.++.....+ +++|+.+++++|+++||||++.+.+++.+.+.+++.
T Consensus 178 ~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~~~~ 225 (240)
T 3rst_A 178 KGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKKDHK 225 (240)
T ss_dssp HHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHHHCG
T ss_pred HhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHHHhC
Confidence 223445555554 789999999999999999999998887777666553
No 84
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=99.10 E-value=9.8e-11 Score=107.60 Aligned_cols=90 Identities=43% Similarity=0.647 Sum_probs=76.8
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
||||||++|+|+.+.+++|.|.++|++...+..++++++.++..+++..+.|.++.++.++...+....+.+++++|+.|
T Consensus 586 GsGKSTlLr~iagl~~~~~~G~~vpa~~~~i~~v~~i~~~~~~~d~l~~g~S~~~~e~~~la~il~~a~~p~LlLLDEpg 665 (765)
T 1ewq_A 586 MAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEATENSLVLLDEVG 665 (765)
T ss_dssp SSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHCCTTEEEEEESTT
T ss_pred CCChHHHHHHHHhhhhhcccCceeehhccceeeHHHhhccCCHHHHHHhcccHHHHHHHHHHHHHHhccCCCEEEEECCC
Confidence 79999999999999999999999999999999999999999999999999999999999998888777888999999999
Q ss_pred CCcCCCCCCC
Q psy7339 81 RAGIEPPPSC 90 (223)
Q Consensus 81 ~~F~aG~~~~ 90 (223)
++|+.-|...
T Consensus 666 rGTs~lD~~~ 675 (765)
T 1ewq_A 666 RGTSSLDGVA 675 (765)
T ss_dssp TTSCHHHHHH
T ss_pred CCCCCcCHHH
Confidence 9998765443
No 85
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=98.97 E-value=1.2e-09 Score=86.46 Aligned_cols=118 Identities=15% Similarity=0.187 Sum_probs=80.2
Q ss_pred ccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee-----------
Q psy7339 50 NASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV----------- 118 (223)
Q Consensus 50 ~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia----------- 118 (223)
.+..+.+++.+.++.+++ +++++|+++.. |+|.+.. .....+..+. .+++|+|+
T Consensus 19 I~~~~~~~l~~~l~~a~~-~~~~~Ivl~in----spGG~v~-------~~~~i~~~i~---~~~~PVia~v~p~~G~Aas 83 (230)
T 3viv_A 19 ITSYTYDQFDRYITIAEQ-DNAEAIIIELD----TPGGRAD-------AMMNIVQRIQ---QSKIPVIIYVYPPGASAAS 83 (230)
T ss_dssp BCHHHHHHHHHHHHHHHH-TTCSEEEEEEE----BSCEEHH-------HHHHHHHHHH---TCSSCEEEEECSTTCEEET
T ss_pred ECHHHHHHHHHHHHHHhc-CCCCEEEEEEe----CCCcCHH-------HHHHHHHHHH---hCCCCEEEEEecCCCEEhH
Confidence 345677888898888876 46888888754 5554332 1111222222 26777775
Q ss_pred ---------------ecceeeccccccccCCCCcccc---------------chhhhcCH--HHHHHHHHcCCCCCHHHH
Q psy7339 119 ---------------LQATFHTPFTLRGMTPEGCSSV---------------LFPRIFGN--SVASELLYTGRKLNAQEA 166 (223)
Q Consensus 119 ---------------~~a~f~~pe~~~Gl~p~~g~~~---------------~l~~~vg~--~~a~~l~l~g~~~~a~eA 166 (223)
++++|+.+++..+. |..|.+. .+++..|+ .++++++..++.++|+||
T Consensus 84 aG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~~Gr~~~~a~~~~~~~~~ltA~EA 162 (230)
T 3viv_A 84 AGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEA 162 (230)
T ss_dssp HHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTCCEECHHHH
T ss_pred HHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhcCCeecHHHH
Confidence 67777777776533 4444421 36677885 789999999999999999
Q ss_pred HHcCccccccCC-hhHHH
Q psy7339 167 LQYGFVSGVFTT-EEIER 183 (223)
Q Consensus 167 ~~~Glv~~v~~~-~~l~~ 183 (223)
+++||||+|+++ +++++
T Consensus 163 le~GliD~V~~~~~~ll~ 180 (230)
T 3viv_A 163 LKYGVIEVVARDINELLK 180 (230)
T ss_dssp HHTTSCSEECSSHHHHHH
T ss_pred HHcCCceEecCCHHHHHH
Confidence 999999999975 44443
No 86
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=98.70 E-value=9.1e-08 Score=78.75 Aligned_cols=132 Identities=11% Similarity=0.012 Sum_probs=93.2
Q ss_pred ccccchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee---------
Q psy7339 48 ECNASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV--------- 118 (223)
Q Consensus 48 ~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia--------- 118 (223)
++..+.+.+.+.++++.+.++ .+.+|++++.| |.++......+..+.+....+.......+|+|+
T Consensus 132 gslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~l~~~~~i~~al~~~~~~~vP~IavV~G~~~GG 205 (304)
T 2f9y_B 132 GSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGG 205 (304)
T ss_dssp TCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEHH
T ss_pred CCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCccH
Confidence 555778899999999999888 88999999876 433322211122233333333221124899997
Q ss_pred --------ecceeeccccccccCCCCccccchhhhcCHHHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHH
Q psy7339 119 --------LQATFHTPFTLRGMTPEGCSSVLFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIH 190 (223)
Q Consensus 119 --------~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~ 190 (223)
.+-.|..|...+++. +...+++.+|.. ++++..+|++++++|+||.|++++++.+.+.+++.
T Consensus 206 g~a~~a~~~D~via~~~A~i~v~----Gp~~i~~~ig~~------l~~~~~~Ae~~~~~Glvd~Vv~~~el~~~l~~ll~ 275 (304)
T 2f9y_B 206 VSASFAMLGDLNIAEPKALIGFA----GPRVIEQTVREK------LPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASILA 275 (304)
T ss_dssp HHTTGGGCCSEEEECTTCBEESS----CHHHHHHHHTSC------CCTTTTBHHHHGGGTCCSEECCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEeCCcEEEee----cHHHHHHHhCcc------CCcccCCHHHHHhcCCccEEeCcHHHHHHHHHHHH
Confidence 344566666666665 455666777753 46889999999999999999999999999999999
Q ss_pred HHhhc
Q psy7339 191 AWAKL 195 (223)
Q Consensus 191 ~l~~~ 195 (223)
.+...
T Consensus 276 ~l~~~ 280 (304)
T 2f9y_B 276 KLMNL 280 (304)
T ss_dssp HHTTC
T ss_pred HhhcC
Confidence 98764
No 87
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=98.63 E-value=4e-08 Score=77.24 Aligned_cols=113 Identities=12% Similarity=0.075 Sum_probs=70.6
Q ss_pred chHHHHHHHHHHHHHhcCCCeEEEE--cCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee-----------
Q psy7339 52 STFALEMKEIAHIIQFLTPRSLILV--DELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV----------- 118 (223)
Q Consensus 52 s~~~~el~~~~~~l~~~~~~~vvvl--~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia----------- 118 (223)
..+.+++.+.+..++++++.+.|++ ++.|..+.+| ..+.+.+.. +++|+++
T Consensus 56 ~~~a~~i~~~L~~l~~~~~~k~I~l~InSPGG~v~ag----------~~I~~~i~~------~~~pV~t~v~G~AaS~G~ 119 (218)
T 1y7o_A 56 DNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAG----------LAIVDTMNF------IKADVQTIVMGMAASMGT 119 (218)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHHH----------HHHHHHHHH------SSSCEEEEEEEEEETHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHH----------HHHHHHHHh------cCCCEEEEEccEeHHHHH
Confidence 4677888899998888776554444 4444333322 111111111 4566664
Q ss_pred -----ecc--eeeccccccccCCCCccc------------------------cchhhhcCH--HHHHHHHHcCCCCCHHH
Q psy7339 119 -----LQA--TFHTPFTLRGMTPEGCSS------------------------VLFPRIFGN--SVASELLYTGRKLNAQE 165 (223)
Q Consensus 119 -----~~a--~f~~pe~~~Gl~p~~g~~------------------------~~l~~~vg~--~~a~~l~l~g~~~~a~e 165 (223)
-+- ++..|..++|+..+.++. ..+++..|. .++++++..++.++|+|
T Consensus 120 ~Ia~a~d~g~r~a~p~a~igih~p~~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~~~~~~ta~E 199 (218)
T 1y7o_A 120 VIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQE 199 (218)
T ss_dssp HHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCCCBCHHH
T ss_pred HHHHcCCcCcEEEcCCcEEEEecccccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCCEEcHHH
Confidence 122 455555555554443322 446777776 58899999999999999
Q ss_pred HHHcCccccccCChh
Q psy7339 166 ALQYGFVSGVFTTEE 180 (223)
Q Consensus 166 A~~~Glv~~v~~~~~ 180 (223)
|+++||||+|+++++
T Consensus 200 A~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 200 TLEYGFIDEIMANNS 214 (218)
T ss_dssp HHHHTSCSEECCCC-
T ss_pred HHHCCCCcEEcCcCC
Confidence 999999999998765
No 88
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=98.39 E-value=2.8e-06 Score=70.53 Aligned_cols=141 Identities=11% Similarity=0.094 Sum_probs=87.5
Q ss_pred cchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee------------
Q psy7339 51 ASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------ 118 (223)
Q Consensus 51 ~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------ 118 (223)
.+.-.+-..++++.+++..-.-+.+++..| |..|...... ...+...+. +.....+++|+|+
T Consensus 142 ~~~~~~Ka~r~~~~A~~~~~PlI~lvdt~G--a~~g~~ae~~-g~~~~~a~~---l~al~~~~vPvIavV~G~a~GGGa~ 215 (327)
T 2f9i_A 142 HPEGYRKALRLMKQAEKFNRPIFTFIDTKG--AYPGKAAEER-GQSESIATN---LIEMASLKVPVIAIVIGEGGSGGAL 215 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEEEESC--SCCCHHHHHT-THHHHHHHH---HHHHHTCSSCEEEEEEEEEBHHHHH
T ss_pred CHHHHHHHHHHHHHHhhcCCCEEEEEeCCC--CCcchhhhhh-hhHHHHHHH---HHHHHhCCCCEEEEEECCcChHHHH
Confidence 444566677777777665544444445433 3334221110 111222222 2222248999997
Q ss_pred ----ecceeeccccccccCCCCccccchhhhcCH-HHHHHHHHcCCCCCHHHHHHcCccccccCCh-------------h
Q psy7339 119 ----LQATFHTPFTLRGMTPEGCSSVLFPRIFGN-SVASELLYTGRKLNAQEALQYGFVSGVFTTE-------------E 180 (223)
Q Consensus 119 ----~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~-~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~-------------~ 180 (223)
-+-.+..|...+|+.++.++...+.+..+. ..|.++ +.++|++|+++|+||+|+|.. +
T Consensus 216 ~~~~~D~via~~~A~~~v~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd~VV~ep~gga~~~~~~~~~~ 291 (327)
T 2f9i_A 216 GIGIANKVLMLENSTYSVISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIIDDVISEPLGGAHKDIEQQALA 291 (327)
T ss_dssp TTCCCSEEEEETTCBCBSSCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSSEEECCCTTCGGGCHHHHHHH
T ss_pred HHHCCCEEEEcCCceEeecCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCceEEecCCCCCCccCHHHHHHH
Confidence 466888899999988877777766665543 667766 789999999999999999842 4
Q ss_pred HHHhHHHHHHHHhhcchHHHH
Q psy7339 181 IERDLWPRIHAWAKLSSCIVS 201 (223)
Q Consensus 181 l~~~a~~~a~~l~~~~~~a~~ 201 (223)
+.+...+..+.+...++..+.
T Consensus 292 lr~~l~~~L~~l~~~~~~~l~ 312 (327)
T 2f9i_A 292 IKSAFVAQLDSLESLSRDEIA 312 (327)
T ss_dssp HHHHHHHHHHTTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHH
Confidence 555555555555566655443
No 89
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=98.23 E-value=5.6e-06 Score=69.00 Aligned_cols=141 Identities=9% Similarity=0.059 Sum_probs=82.6
Q ss_pred cchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee------------
Q psy7339 51 ASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------ 118 (223)
Q Consensus 51 ~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------ 118 (223)
.+.-.+-..++++.+++..-.-+.+++..| |..|...... .......+. +.....+++|+|+
T Consensus 156 ~~~~~~Ka~r~~~~A~~~~lPlI~lvDt~G--a~~g~~aE~~-g~~~~~a~~---l~al~~~~vPvIavV~G~a~GGGa~ 229 (339)
T 2f9y_A 156 APEGYRKALRLMQMAERFKMPIITFIDTPG--AYPGVGAEER-GQSEAIARN---LREMSRLGVPVVCTVIGEGGSGGAL 229 (339)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEEEESC--SCCSHHHHHT-THHHHHHHH---HHHHHTCSSCEEEEEEEEEEHHHHH
T ss_pred CHHHHHHHHHHHHHHhhcCCCEEEEEeCCC--CccchHHHHH-HHHHHHHHH---HHHHHhCCCCEEEEEeCCcCcHHHH
Confidence 445566677777776655444444445433 3334221100 111122222 2222248999997
Q ss_pred ----ecceeeccccccccCCCCcccc-chhhhcCHHHHHHHHHcCCCCCHHHHHHcCccccccCCh-------------h
Q psy7339 119 ----LQATFHTPFTLRGMTPEGCSSV-LFPRIFGNSVASELLYTGRKLNAQEALQYGFVSGVFTTE-------------E 180 (223)
Q Consensus 119 ----~~a~f~~pe~~~Gl~p~~g~~~-~l~~~vg~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~-------------~ 180 (223)
-+-.+..|...+|+.++.++.. ++++..+...|.++ +.++|++|+++|+||+|+|.. +
T Consensus 230 ~~~~~D~via~p~A~~~v~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~ep~gga~~~~~~~~~~ 305 (339)
T 2f9y_A 230 AIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIPEPLGGAHRNPEAMAAS 305 (339)
T ss_dssp TTCCCSEEEECTTCEEESSCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCCCSTTCGGGCHHHHHHH
T ss_pred HHhccCeeeecCCCEEEeeccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEecCCCCCCccCHHHHHHH
Confidence 4567777888887666554444 44445566778777 689999999999999999842 4
Q ss_pred HHHhHHHHHHHHhhcchHHHH
Q psy7339 181 IERDLWPRIHAWAKLSSCIVS 201 (223)
Q Consensus 181 l~~~a~~~a~~l~~~~~~a~~ 201 (223)
+.+...+..+.+...++..+.
T Consensus 306 lr~~l~~~L~~l~~~~~~~l~ 326 (339)
T 2f9y_A 306 LKAQLLADLADLDVLSTEDLK 326 (339)
T ss_dssp HHHHHHHHTTTTTTSCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHH
Confidence 444555555555556655443
No 90
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=97.60 E-value=6.3e-05 Score=58.48 Aligned_cols=117 Identities=14% Similarity=0.030 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHHHhcCCCe--EEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee------------
Q psy7339 53 TFALEMKEIAHIIQFLTPRS--LILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------ 118 (223)
Q Consensus 53 ~~~~el~~~~~~l~~~~~~~--vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------ 118 (223)
...+++.+.+..++.+++.+ ++.+++.|..-.+| ....+.+.. +++|+++
T Consensus 39 ~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG~v~a~----------~~I~~~i~~------~~~pV~~~v~g~AaS~g~~ 102 (208)
T 2cby_A 39 EIANRLCAQILLLAAEDASKDISLYINSPGGSISAG----------MAIYDTMVL------APCDIATYAMGMAASMGEF 102 (208)
T ss_dssp HHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHH----------HHHHHHHHH------CSSCEEEEEEEEEETHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEEECCCCCHHHH----------HHHHHHHHh------cCCCEEEEECcEeHHHHHH
Confidence 45677888888888766544 34445544322111 111111111 4567664
Q ss_pred -----ecc-eeeccccccccCCCCccc----------------------cchhhhcC--HHHHHHHHHcCCCCCHHHHHH
Q psy7339 119 -----LQA-TFHTPFTLRGMTPEGCSS----------------------VLFPRIFG--NSVASELLYTGRKLNAQEALQ 168 (223)
Q Consensus 119 -----~~a-~f~~pe~~~Gl~p~~g~~----------------------~~l~~~vg--~~~a~~l~l~g~~~~a~eA~~ 168 (223)
+.+ ++..|...+|+..+.++. ..+.+..| .....+++..+..++++||++
T Consensus 103 Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta~eA~e 182 (208)
T 2cby_A 103 LLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALE 182 (208)
T ss_dssp HHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEEHHHHHH
T ss_pred HHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCcEEcHHHHHH
Confidence 222 688899998888766432 11333334 344667788999999999999
Q ss_pred cCccccccCC-hhHHHhH
Q psy7339 169 YGFVSGVFTT-EEIERDL 185 (223)
Q Consensus 169 ~Glv~~v~~~-~~l~~~a 185 (223)
+||||++.+. +++++..
T Consensus 183 ~GLvD~i~~~~~~ll~~~ 200 (208)
T 2cby_A 183 YGFVDHIITRAHVNGEAQ 200 (208)
T ss_dssp HTSCSEECSCC-------
T ss_pred cCCCcEecCchHHHHHHH
Confidence 9999999964 5555443
No 91
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=96.25 E-value=0.0042 Score=47.48 Aligned_cols=110 Identities=15% Similarity=0.097 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHHHhcCCCe--EEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee------------
Q psy7339 53 TFALEMKEIAHIIQFLTPRS--LILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------ 118 (223)
Q Consensus 53 ~~~~el~~~~~~l~~~~~~~--vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------ 118 (223)
...+.+.+.+..++.+++.+ ++.+++.|..-.+| ..+.+.+.. .++|+++
T Consensus 38 ~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~a~----------~~I~~~i~~------~~~pV~~~v~g~AaS~g~~ 101 (193)
T 1yg6_A 38 HMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAG----------MSIYDTMQF------IKPDVSTICMGQAASMGAF 101 (193)
T ss_dssp HHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHH----------HHHHHHHHH------SSSCEEEEEEEEEETHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHH----------HHHHHHHHh------cCCCEEEEEeeeHHHHHHH
Confidence 35667777777777666544 44445555322111 111211111 4556664
Q ss_pred -----ecc-eeeccccccccCCCCcccc----------------------chhhhcC--HHHHHHHHHcCCCCCHHHHHH
Q psy7339 119 -----LQA-TFHTPFTLRGMTPEGCSSV----------------------LFPRIFG--NSVASELLYTGRKLNAQEALQ 168 (223)
Q Consensus 119 -----~~a-~f~~pe~~~Gl~p~~g~~~----------------------~l~~~vg--~~~a~~l~l~g~~~~a~eA~~ 168 (223)
+.. ++..|...+|+..+.++.. .+.+..| .....+++-.+..++++||++
T Consensus 102 Ia~ag~~~~r~a~p~s~i~ih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta~eA~~ 181 (193)
T 1yg6_A 102 LLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVE 181 (193)
T ss_dssp HHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHHHH
T ss_pred HHHCCCcCcEEEecCcEEEEEeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCeEEcHHHHHH
Confidence 222 7899999999888765421 1222333 234444443345579999999
Q ss_pred cCccccccCC
Q psy7339 169 YGFVSGVFTT 178 (223)
Q Consensus 169 ~Glv~~v~~~ 178 (223)
+||||++.++
T Consensus 182 ~GliD~i~~~ 191 (193)
T 1yg6_A 182 YGLVDSILTH 191 (193)
T ss_dssp HTSSSEECCC
T ss_pred cCCCCEecCC
Confidence 9999999864
No 92
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=96.05 E-value=0.022 Score=44.23 Aligned_cols=58 Identities=17% Similarity=0.057 Sum_probs=36.9
Q ss_pred eeeccccccccCCCCccccc----------------------hhhhc--CHHHHHHHHHcCCCCCHHHHHHcCccccccC
Q psy7339 122 TFHTPFTLRGMTPEGCSSVL----------------------FPRIF--GNSVASELLYTGRKLNAQEALQYGFVSGVFT 177 (223)
Q Consensus 122 ~f~~pe~~~Gl~p~~g~~~~----------------------l~~~v--g~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~ 177 (223)
++..|...+|+..+.++..- +.+.. ......+++-.+..++++||+++||||++.+
T Consensus 123 i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~~lta~eA~e~GLiD~I~~ 202 (215)
T 2f6i_A 123 RKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIE 202 (215)
T ss_dssp EEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEECHHHHHHHTSCSEECC
T ss_pred EEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCeecCHHHHHHCCCCCEecC
Confidence 78888888887776544210 01111 2233444444345569999999999999986
Q ss_pred Ch
Q psy7339 178 TE 179 (223)
Q Consensus 178 ~~ 179 (223)
+.
T Consensus 203 ~~ 204 (215)
T 2f6i_A 203 TK 204 (215)
T ss_dssp CS
T ss_pred Cc
Confidence 53
No 93
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=96.02 E-value=0.0099 Score=47.90 Aligned_cols=57 Identities=12% Similarity=0.181 Sum_probs=38.8
Q ss_pred eeeccccccccCCCCcccc----------------------chhhhcC--HHHHHHHHHcCCCCCHHHHHHcCccccccC
Q psy7339 122 TFHTPFTLRGMTPEGCSSV----------------------LFPRIFG--NSVASELLYTGRKLNAQEALQYGFVSGVFT 177 (223)
Q Consensus 122 ~f~~pe~~~Gl~p~~g~~~----------------------~l~~~vg--~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~ 177 (223)
++..|...+|+..+.++.. .+.+..| .....+++-.+..++++||+++||||+|..
T Consensus 167 r~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~~lta~EAle~GLID~I~~ 246 (277)
T 1tg6_A 167 RHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLV 246 (277)
T ss_dssp EEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEECHHHHHHHTSCSEECS
T ss_pred EEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcccCHHHHHHCCCCCEecC
Confidence 7999999999888765431 1111222 234445544455679999999999999996
Q ss_pred C
Q psy7339 178 T 178 (223)
Q Consensus 178 ~ 178 (223)
.
T Consensus 247 ~ 247 (277)
T 1tg6_A 247 H 247 (277)
T ss_dssp S
T ss_pred c
Confidence 5
No 94
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=95.94 E-value=0.027 Score=49.50 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=73.3
Q ss_pred cceeeccccccccCCCCccccchhhh-cCHHHHHH--HHHcCCCCCHHHHHHcCccccccCChhHHHhHHHHHHHHhhcc
Q psy7339 120 QATFHTPFTLRGMTPEGCSSVLFPRI-FGNSVASE--LLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPRIHAWAKLS 196 (223)
Q Consensus 120 ~a~f~~pe~~~Gl~p~~g~~~~l~~~-vg~~~a~~--l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~ 196 (223)
...+.+.+.++|..|-..+..+|.++ .|.....+ -...|+++++++|.++|||+...++=+.+++.+-..++=++.+
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (556)
T 2w3p_A 414 EPAITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMS 493 (556)
T ss_dssp SCCEECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSC
T ss_pred CceeEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccC
Confidence 57888999999999988887788765 45433322 2345999999999999999988877789999999999999999
Q ss_pred hHHHHHHHHHHH
Q psy7339 197 SCIVSLLAHLMR 208 (223)
Q Consensus 197 ~~a~~~~K~~l~ 208 (223)
|.++..+-..+|
T Consensus 494 ~~~~~~~~~~~~ 505 (556)
T 2w3p_A 494 PDALTGLEANLR 505 (556)
T ss_dssp HHHHHHHHHHHS
T ss_pred cchhccchhhcc
Confidence 999998877765
No 95
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=95.86 E-value=0.029 Score=50.18 Aligned_cols=124 Identities=11% Similarity=0.091 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCC-CCCCcchhhhhHHHHhHHHHhhhhhcccceee-------------
Q psy7339 53 TFALEMKEIAHIIQFLTPRSLILVDELCRAGIEP-PPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------- 118 (223)
Q Consensus 53 ~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------- 118 (223)
....++.+.++.+++|+.++.|++.=.. .| .+. .....+.+.+..+.. ..+||++
T Consensus 70 ~~~~~i~~~L~~a~~d~~ik~I~L~ins----pGgG~v----~~~~~I~~~i~~~k~---~gkpvva~~~~aas~~y~lA 138 (593)
T 3bf0_A 70 NSLFDIVNTIRQAKDDRNITGIVMDLKN----FAGGDQ----PSMQYIGKALKEFRD---SGKPVYAVGENYSQGQYYLA 138 (593)
T ss_dssp EEHHHHHHHHHHHHHCTTCCCEEEECTE----EEECCH----HHHHHHHHHHHHHHH---TTCCEEEEESCEEHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCceEEEEEeCC----CCCCcH----HHHHHHHHHHHHHHh---cCCeEEEEEccchhHHHHHH
Confidence 4567788888889889888888886321 11 122 122333334444432 3588887
Q ss_pred --ecceeeccccccccCCCCccccchh-----------------------------------------------------
Q psy7339 119 --LQATFHTPFTLRGMTPEGCSSVLFP----------------------------------------------------- 143 (223)
Q Consensus 119 --~~a~f~~pe~~~Gl~p~~g~~~~l~----------------------------------------------------- 143 (223)
.+-.|..|...+|+.........+.
T Consensus 139 saad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~~~~~~~v 218 (593)
T 3bf0_A 139 SFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTV 218 (593)
T ss_dssp TTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557777888888777654321110
Q ss_pred ---hhcCHHHHHHHHHc-------CCCCCHHHHHHcCccccccCChhHHHhHHH
Q psy7339 144 ---RIFGNSVASELLYT-------GRKLNAQEALQYGFVSGVFTTEEIERDLWP 187 (223)
Q Consensus 144 ---~~vg~~~a~~l~l~-------g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~ 187 (223)
|.+......+++-. +..++|+||++.||||++...+++.+...+
T Consensus 219 a~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~~ 272 (593)
T 3bf0_A 219 AANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALTK 272 (593)
T ss_dssp HHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 11111222223222 688999999999999999976666555444
No 96
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=95.54 E-value=0.018 Score=44.28 Aligned_cols=59 Identities=15% Similarity=0.205 Sum_probs=37.6
Q ss_pred ceeeccccccccCCCCccc-c----------------------chhhhcC--HHHHHHHHHcCCCCCHHHHHHcCccccc
Q psy7339 121 ATFHTPFTLRGMTPEGCSS-V----------------------LFPRIFG--NSVASELLYTGRKLNAQEALQYGFVSGV 175 (223)
Q Consensus 121 a~f~~pe~~~Gl~p~~g~~-~----------------------~l~~~vg--~~~a~~l~l~g~~~~a~eA~~~Glv~~v 175 (223)
-++.+|..++-+..++++. . .+.+..| .....+.+-...-++|+||+++||||+|
T Consensus 122 kR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~m~rd~~msa~EA~eyGlID~V 201 (205)
T 4gm2_A 122 YRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVISNVLERDKYFNADEAVDFKLIDHI 201 (205)
T ss_dssp CEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHTTSCEEEEHHHHHHTTSCSEE
T ss_pred CEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCcccCHHHHHHcCCccEe
Confidence 4899999999888877654 1 1111111 1222233333445899999999999999
Q ss_pred cCCh
Q psy7339 176 FTTE 179 (223)
Q Consensus 176 ~~~~ 179 (223)
+..|
T Consensus 202 ~~~e 205 (205)
T 4gm2_A 202 LEKE 205 (205)
T ss_dssp CCC-
T ss_pred ecCC
Confidence 8754
No 97
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=95.50 E-value=0.013 Score=45.05 Aligned_cols=60 Identities=17% Similarity=0.140 Sum_probs=38.9
Q ss_pred eeeccccccccCCCCcccc----------------------chhhhcC--HHHHHHHHHcCCCCCHHHHHHcCccccccC
Q psy7339 122 TFHTPFTLRGMTPEGCSSV----------------------LFPRIFG--NSVASELLYTGRKLNAQEALQYGFVSGVFT 177 (223)
Q Consensus 122 ~f~~pe~~~Gl~p~~g~~~----------------------~l~~~vg--~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~ 177 (223)
++..|..++++..++++.. .+.+..| .....+++-....++|+||+++||||+|++
T Consensus 115 r~~~p~a~imiH~p~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~~~lta~EA~e~GliD~I~~ 194 (201)
T 3p2l_A 115 RYSLPSSQIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAKAYGLIDHVIE 194 (201)
T ss_dssp EEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEEEHHHHHHHTSCSEECC
T ss_pred EEEcCCCeEEEeccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcCeeecHHHHHHcCCccEecC
Confidence 7899999999988875420 1122222 233444433334469999999999999987
Q ss_pred C-hhH
Q psy7339 178 T-EEI 181 (223)
Q Consensus 178 ~-~~l 181 (223)
+ +++
T Consensus 195 ~~~~l 199 (201)
T 3p2l_A 195 SREAI 199 (201)
T ss_dssp CSCC-
T ss_pred CHHHh
Confidence 5 444
No 98
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=95.49 E-value=0.025 Score=43.51 Aligned_cols=112 Identities=13% Similarity=0.081 Sum_probs=65.2
Q ss_pred chHHHHHHHHHHHHHhcCCCe--EEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee-----------
Q psy7339 52 STFALEMKEIAHIIQFLTPRS--LILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV----------- 118 (223)
Q Consensus 52 s~~~~el~~~~~~l~~~~~~~--vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia----------- 118 (223)
....+.+.+.+..++.++..+ .+.+++.|....+| ..+.+.++. .++|+++
T Consensus 38 ~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG~v~~~----------~~I~~~i~~------~~~~V~t~~~G~AaSag~ 101 (203)
T 3qwd_A 38 DNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAG----------FAIYDTIQH------IKPDVQTICIGMAASMGS 101 (203)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSCEEEEEEECCBCHHHH----------HHHHHHHHH------SSSCEEEEEEEEEETHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHH----------HHHHHHHHH------hcCCcEEEEeeeehhHHH
Confidence 345667777777777766543 44456555332111 111111111 4566664
Q ss_pred ------e-cceeeccccccccCCCCcccc----------------------chhhhcC--HHHHHHHHHcCCCCCHHHHH
Q psy7339 119 ------L-QATFHTPFTLRGMTPEGCSSV----------------------LFPRIFG--NSVASELLYTGRKLNAQEAL 167 (223)
Q Consensus 119 ------~-~a~f~~pe~~~Gl~p~~g~~~----------------------~l~~~vg--~~~a~~l~l~g~~~~a~eA~ 167 (223)
+ +-++..|..++++.-++++.. .+.+..| .....+++-....++|+||+
T Consensus 102 ~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d~~lta~EA~ 181 (203)
T 3qwd_A 102 FLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181 (203)
T ss_dssp HHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSCCCEEHHHHH
T ss_pred HHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcCceecHHHHH
Confidence 2 248888999988875554310 1222223 34455555555678999999
Q ss_pred HcCccccccCCh
Q psy7339 168 QYGFVSGVFTTE 179 (223)
Q Consensus 168 ~~Glv~~v~~~~ 179 (223)
++||||+|.++.
T Consensus 182 e~GliD~I~~~~ 193 (203)
T 3qwd_A 182 EYGLIDEVMVPE 193 (203)
T ss_dssp HHTSCSEECCCC
T ss_pred HcCCcCEecCCc
Confidence 999999999764
No 99
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=90.06 E-value=0.96 Score=40.25 Aligned_cols=46 Identities=17% Similarity=0.242 Sum_probs=34.4
Q ss_pred hcCHHHHHHHH-HcCCCCCHHH-------HHHcCccccccCChh-HHHhHHHHHH
Q psy7339 145 IFGNSVASELL-YTGRKLNAQE-------ALQYGFVSGVFTTEE-IERDLWPRIH 190 (223)
Q Consensus 145 ~vg~~~a~~l~-l~g~~~~a~e-------A~~~Glv~~v~~~~~-l~~~a~~~a~ 190 (223)
.++..+|.+++ .+|+.+++++ +.+.|++|.++++++ ..+.++++..
T Consensus 230 ~~d~~~A~el~~~tge~v~~e~lgga~~h~~~~GvvD~vv~~e~~a~~~~r~~ls 284 (587)
T 1pix_A 230 HVDLEYANEIADMVDRTGKTEPPGAVDIHYTETGFMREVYASEEGVLEGIKKYVG 284 (587)
T ss_dssp SCCHHHHHHHHHHHHTTCCCCCSSBHHHHTTTSCCSCEEESSHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHhCCccChhhcccHHHHHhhcCceeEecCCHHHHHHHHHHHHH
Confidence 37899999999 9999887665 236899999999875 4444444443
No 100
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=88.12 E-value=4.4 Score=32.54 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=23.2
Q ss_pred CHHHHHHcCccccccCChhHHHhHHHHHHH
Q psy7339 162 NAQEALQYGFVSGVFTTEEIERDLWPRIHA 191 (223)
Q Consensus 162 ~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~ 191 (223)
+|+...+.|+||.|++++++.+...++..-
T Consensus 250 ~Ae~~~~~G~iD~Iv~~~e~r~~l~~~L~~ 279 (285)
T 2f9i_B 250 TAEFLLEHGQLDKVVHRNDMRQTLSEILKI 279 (285)
T ss_dssp BHHHHHHTTCCSEECCGGGHHHHHHHHHHH
T ss_pred hHHHHHhcCCccEEeChHHHHHHHHHHHHH
Confidence 567788999999999988776666665543
No 101
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=86.17 E-value=7 Score=34.27 Aligned_cols=136 Identities=10% Similarity=0.045 Sum_probs=75.0
Q ss_pred chHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee-------------
Q psy7339 52 STFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------- 118 (223)
Q Consensus 52 s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------- 118 (223)
..-..-..+.++.+++- .+=+|.|-. -.+|..|...+. ....++..+....+ ..+.+|+|+
T Consensus 348 ~~~~~Kaar~i~~a~~~-~~Plv~lvD-tpG~~~G~~~E~-~g~~~~~A~~~~a~---~~~~vP~isvI~g~~~gGg~~a 421 (527)
T 1vrg_A 348 IDSSDKAARFIRFLDAF-NIPILTFVD-TPGYLPGVAQEH-GGIIRHGAKLLYAY---SEATVPKITVILRKAYGGAYIA 421 (527)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCEEEEEE-ECCBCCCHHHHH-TTHHHHHHHHHHHH---HHCCSCEEEEEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CCCeEEEec-CCCCcCchhhHH-hHHHHHHHHHHHHH---hcCCCCEEEEEeCCcccHHHHH
Confidence 33344455556555433 333444432 234666622211 11223333322222 237788886
Q ss_pred -------ecceeeccccccccCCCCccccchhhhc-----CHHHHHH-HH--HcCCCCCHHHHHHcCccccccCChhHHH
Q psy7339 119 -------LQATFHTPFTLRGMTPEGCSSVLFPRIF-----GNSVASE-LL--YTGRKLNAQEALQYGFVSGVFTTEEIER 183 (223)
Q Consensus 119 -------~~a~f~~pe~~~Gl~p~~g~~~~l~~~v-----g~~~a~~-l~--l~g~~~~a~eA~~~Glv~~v~~~~~l~~ 183 (223)
.+..|..|...++...+-+....+.+.- -+...++ +. +.-+.-++..+.+.|+||+|+++.++.+
T Consensus 422 m~~~~~~~d~~~a~p~a~~~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~~~~g~iD~II~p~~tR~ 501 (527)
T 1vrg_A 422 MGSKHLGADMVLAWPSAEIAVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQQFANPYIAASRGYVDMVIDPRETRK 501 (527)
T ss_dssp TTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHTSSHHHHHHTTSSSEECCGGGHHH
T ss_pred hcCCCCCCCEEEEcCCCeEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHHHcCCCCeeeCHHHHHH
Confidence 3567899999999988777765554421 0111111 22 1112467788999999999999877766
Q ss_pred hHHHHHHHHh
Q psy7339 184 DLWPRIHAWA 193 (223)
Q Consensus 184 ~a~~~a~~l~ 193 (223)
...+..+.+.
T Consensus 502 ~l~~~L~~l~ 511 (527)
T 1vrg_A 502 YIMRALEVCE 511 (527)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 6666555554
No 102
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=84.63 E-value=4.9 Score=33.36 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=39.3
Q ss_pred CCchhHHHHHHHHHHHHHhhC---CcccCCc-ceeccccceeeecccc-cccccccchHHHHHHHHHHHHHhcCCCeEEE
Q psy7339 1 MSGKSVYIKQVALLQIMAQVG---CYVPASL-AEFRLADHIYTRIGFN-DSIECNASTFALEMKEIAHIIQFLTPRSLIL 75 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g---~~vpa~~-~~~~~~d~I~~~~~~~-~~~~~~~s~~~~el~~~~~~l~~~~~~~vvv 75 (223)
.+||||++.+++.... ..| +|+-.+. +.-....+ ++.+ +++.-....-.+++.+.++.+-......+||
T Consensus 71 GsGKSTLal~la~~~~--~~gg~VlyId~E~s~~~~ra~r----lgv~~~~l~i~~~~~~e~~l~~~~~l~~~~~~dlvV 144 (356)
T 3hr8_A 71 SSGKTTLALHAIAEAQ--KMGGVAAFIDAEHALDPVYAKN----LGVDLKSLLISQPDHGEQALEIVDELVRSGVVDLIV 144 (356)
T ss_dssp TSSHHHHHHHHHHHHH--HTTCCEEEEESSCCCCHHHHHH----HTCCGGGCEEECCSSHHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCHHHHHHHHHHHHH--hcCCeEEEEecccccchHHHHH----cCCchhhhhhhhccCHHHHHHHHHHHhhhcCCCeEE
Confidence 4899999999886543 233 2443332 11111111 1111 1211112222345555555554455678999
Q ss_pred EcCCCCCcC
Q psy7339 76 VDELCRAGI 84 (223)
Q Consensus 76 l~~~g~~F~ 84 (223)
+|+...-+.
T Consensus 145 IDSi~~l~~ 153 (356)
T 3hr8_A 145 VDSVAALVP 153 (356)
T ss_dssp EECTTTCCC
T ss_pred ehHhhhhcC
Confidence 998765553
No 103
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=81.87 E-value=4.2 Score=29.18 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCC
Q psy7339 53 TFALEMKEIAHIIQFLTPRSLILVDELCRAGIEP 86 (223)
Q Consensus 53 ~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG 86 (223)
.+...+.+.+..+.......++++++.......+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~vl~iDe~~~l~~~~ 131 (195)
T 1jbk_A 98 EFEERLKGVLNDLAKQEGNVILFIDELHTMVGAG 131 (195)
T ss_dssp HHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT--
T ss_pred cHHHHHHHHHHHHhhcCCCeEEEEeCHHHHhccC
Confidence 4455666777777666667899999987655443
No 104
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=81.78 E-value=0.55 Score=34.25 Aligned_cols=15 Identities=13% Similarity=0.058 Sum_probs=12.2
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++|||||+|.++-..
T Consensus 43 GaGKTTLlr~l~g~l 57 (158)
T 1htw_A 43 GAGKTTLTRGMLQGI 57 (158)
T ss_dssp TSSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHhC
Confidence 589999999886553
No 105
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=80.84 E-value=7.3 Score=31.98 Aligned_cols=80 Identities=9% Similarity=0.079 Sum_probs=39.1
Q ss_pred CCchhHHHHHHHHHHHHH---hhCCcccCCc-ceeccccceeeecccc-cccccccchHHHHH-HHHHHHHH--hcCCCe
Q psy7339 1 MSGKSVYIKQVALLQIMA---QVGCYVPASL-AEFRLADHIYTRIGFN-DSIECNASTFALEM-KEIAHIIQ--FLTPRS 72 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~---~~g~~vpa~~-~~~~~~d~I~~~~~~~-~~~~~~~s~~~~el-~~~~~~l~--~~~~~~ 72 (223)
.+||||++-++.....-. ..-+|+-++. +.-... .+++.+ +++--...+-.+++ .++.+.++ ......
T Consensus 38 GsGKTtL~Lq~~~~~~~~g~g~~vlyId~E~s~~~~ra----~~lGvd~d~llv~~~~~~E~~~l~i~~~l~~i~~~~~~ 113 (333)
T 3io5_A 38 KSFKSNFGLTMVSSYMRQYPDAVCLFYDSEFGITPAYL----RSMGVDPERVIHTPVQSLEQLRIDMVNQLDAIERGEKV 113 (333)
T ss_dssp SSSHHHHHHHHHHHHHHHCTTCEEEEEESSCCCCHHHH----HHTTCCGGGEEEEECSBHHHHHHHHHHHHHTCCTTCCE
T ss_pred CCCHHHHHHHHHHHHHhcCCCceEEEEeccchhhHHHH----HHhCCCHHHeEEEcCCCHHHHHHHHHHHHHHhhccCce
Confidence 489999988886665432 1124444442 221111 111111 11111112223344 34444442 334689
Q ss_pred EEEEcCCCCCcC
Q psy7339 73 LILVDELCRAGI 84 (223)
Q Consensus 73 vvvl~~~g~~F~ 84 (223)
+||+|+...-|.
T Consensus 114 lvVIDSI~aL~~ 125 (333)
T 3io5_A 114 VVFIDSLGNLAS 125 (333)
T ss_dssp EEEEECSTTCBC
T ss_pred EEEEeccccccc
Confidence 999999887764
No 106
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=79.90 E-value=9.4 Score=31.70 Aligned_cols=79 Identities=16% Similarity=0.203 Sum_probs=39.7
Q ss_pred CCchhHHHHHHHHHHHHHh-hCCcccCCcceeccccce-eeecccc-cccccccchHHHHHHHHHHHHHhcCCCeEEEEc
Q psy7339 1 MSGKSVYIKQVALLQIMAQ-VGCYVPASLAEFRLADHI-YTRIGFN-DSIECNASTFALEMKEIAHIIQFLTPRSLILVD 77 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~-~g~~vpa~~~~~~~~d~I-~~~~~~~-~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~ 77 (223)
.+|||+|+.+++....... -.+|+..+.. ++.+ ..+++.+ +++.-....-.+++.+.++.+.......+||+|
T Consensus 84 GsGKTtlal~la~~~~~~g~~vlyi~~E~s----~~~~~a~~~g~d~~~l~i~~~~~~e~~l~~l~~l~~~~~~~lVVID 159 (366)
T 1xp8_A 84 SGGKTTLALAIVAQAQKAGGTCAFIDAEHA----LDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSGAIDVVVVD 159 (366)
T ss_dssp TSSHHHHHHHHHHHHHHTTCCEEEEESSCC----CCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred CCChHHHHHHHHHHHHHCCCeEEEEECCCC----hhHHHHHHcCCCHHHceeecCCcHHHHHHHHHHHHhcCCCCEEEEe
Confidence 4799999999887654221 1233333321 1111 0011110 100000111234555666666555678999999
Q ss_pred CCCCCc
Q psy7339 78 ELCRAG 83 (223)
Q Consensus 78 ~~g~~F 83 (223)
+...-+
T Consensus 160 sl~~l~ 165 (366)
T 1xp8_A 160 SVAALT 165 (366)
T ss_dssp CTTTCC
T ss_pred ChHHhc
Confidence 988655
No 107
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=79.87 E-value=9.6 Score=33.36 Aligned_cols=137 Identities=12% Similarity=0.022 Sum_probs=69.8
Q ss_pred cchHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee------------
Q psy7339 51 ASTFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------ 118 (223)
Q Consensus 51 ~s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------ 118 (223)
.+.-.+-+.++++.+++ ..+=+|.+...+ +|..|...+. ....++..+....+ ....+|.|+
T Consensus 342 ~~~~~~K~ar~i~~a~~-~~~Plv~l~ds~-G~~~G~~~E~-~G~~~~~Ak~l~~~---~~~~vP~Isvi~g~~~GGg~~ 415 (522)
T 1x0u_A 342 DIDAADKAARFIRFCDA-FNIPLISLVDTP-GYVPGTDQEY-KGIIRHGAKMLYAF---AEATVPKITVIVRKSYGGAHI 415 (522)
T ss_dssp CHHHHHHHHHHHHHHHH-TTCCEEEEEEEC-CBCCSHHHHH-TTHHHHHHHHHHHH---HHCCSCEEEEEEEEEEHHHHH
T ss_pred CHHHHHHHHHHHHHHhh-CCCCEEEEecCC-CCCCchHHHH-HHHHHHHHHHHHHH---HhCCCCEEEEEeCCcccHHHH
Confidence 34445556666665554 344455554332 4555522111 11223333322222 236788886
Q ss_pred --------ecceeeccccccccCCCCccccchhhhc-CH----HHH-HHHH--HcCCCCCHHHHHHcCccccccCChhHH
Q psy7339 119 --------LQATFHTPFTLRGMTPEGCSSVLFPRIF-GN----SVA-SELL--YTGRKLNAQEALQYGFVSGVFTTEEIE 182 (223)
Q Consensus 119 --------~~a~f~~pe~~~Gl~p~~g~~~~l~~~v-g~----~~a-~~l~--l~g~~~~a~eA~~~Glv~~v~~~~~l~ 182 (223)
.+-.|..|...+|+..+-+....+.+.. -. ... .++. +.-..-++..+.+.|+||.|+++.++.
T Consensus 416 ~~a~~a~~~D~v~a~p~A~i~v~gpegaa~Il~r~~i~~~~d~~~~~~~l~~~y~~~~~~~~~~~~~G~iD~II~p~~tR 495 (522)
T 1x0u_A 416 AMSIKSLGADLVYAWPTAEIAVTGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRKLFANPYWAAEKGLVDDVIEPKDTR 495 (522)
T ss_dssp HTCCGGGTCSEEEECTTCEEESSCHHHHHHHHTSSSSSSSSSSSSSSHHHHHHHHHHHSSSHHHHHTTSSSEECCGGGHH
T ss_pred HhcccccCCCEEEEeCCCEEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhcCCHHHHHhcCCCcEeECHHHHH
Confidence 3445667777777766655544443321 10 000 0011 001124557799999999999988877
Q ss_pred HhHHHHHHHHh
Q psy7339 183 RDLWPRIHAWA 193 (223)
Q Consensus 183 ~~a~~~a~~l~ 193 (223)
+......+.+.
T Consensus 496 ~~L~~~L~~~~ 506 (522)
T 1x0u_A 496 RVIVAGLEMLK 506 (522)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 76666665554
No 108
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=78.59 E-value=5.6 Score=28.43 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCC
Q psy7339 53 TFALEMKEIAHIIQFLTPRSLILVDELCRAGIEP 86 (223)
Q Consensus 53 ~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG 86 (223)
.....+.+++..+.......++++++.......+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~vl~iDe~~~l~~~~ 131 (187)
T 2p65_A 98 DFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAG 131 (187)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEETTGGGGSSSS
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEeCHHHhcccc
Confidence 3344566677777766667899999987665443
No 109
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=77.14 E-value=0.93 Score=33.61 Aligned_cols=15 Identities=20% Similarity=0.251 Sum_probs=12.3
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||++|.+.-..
T Consensus 10 GsGKTTLl~~l~g~l 24 (178)
T 1ye8_A 10 GVGKTTLVKKIVERL 24 (178)
T ss_dssp TSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 589999999887544
No 110
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=75.91 E-value=4.2 Score=36.16 Aligned_cols=77 Identities=10% Similarity=-0.028 Sum_probs=52.1
Q ss_pred cceeeccccccccCCCCccccchhhhcCHH----------HH---HHHHH-cCCCCCHHHHHHcCccccccCChhHHHhH
Q psy7339 120 QATFHTPFTLRGMTPEGCSSVLFPRIFGNS----------VA---SELLY-TGRKLNAQEALQYGFVSGVFTTEEIERDL 185 (223)
Q Consensus 120 ~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~----------~a---~~l~l-~g~~~~a~eA~~~Glv~~v~~~~~l~~~a 185 (223)
+..|..|...+++..+-+....+.+.--.. .+ .++.- .-+..++..|.+.|+||+|+++.+.....
T Consensus 473 d~~~a~p~A~~~Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~~~p~~aa~~g~iD~VI~p~~tR~~l 552 (587)
T 1pix_A 473 AFSIGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKSRPKVCAELGLVDEIVDMNKIRGYV 552 (587)
T ss_dssp EEEEECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTTSHHHHHHHTSSSEECCTTTHHHHH
T ss_pred ceeeeccCCeEecCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHHHHHhCCHHHHHhcCCCccccCHHHHHHHH
Confidence 667899999999888777765554321110 00 00100 01258889999999999999998888777
Q ss_pred HHHHHHHhhcc
Q psy7339 186 WPRIHAWAKLS 196 (223)
Q Consensus 186 ~~~a~~l~~~~ 196 (223)
....+.+...|
T Consensus 553 ~~~L~~~~~~~ 563 (587)
T 1pix_A 553 EAFTEAAYQNP 563 (587)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHHHHhcCC
Confidence 77777776665
No 111
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=75.65 E-value=1.1 Score=35.12 Aligned_cols=12 Identities=42% Similarity=0.722 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 34 GsGKSTLl~~l~ 45 (240)
T 2onk_A 34 GAGKSVFLELIA 45 (240)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 589999999863
No 112
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=75.65 E-value=0.86 Score=35.15 Aligned_cols=11 Identities=36% Similarity=0.344 Sum_probs=9.7
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
++||||++|.+
T Consensus 40 GsGKSTLl~~l 50 (224)
T 2pcj_A 40 GSGKSTLLYIL 50 (224)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999976
No 113
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=75.53 E-value=1.1 Score=34.18 Aligned_cols=14 Identities=29% Similarity=0.178 Sum_probs=12.1
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||++|.++-.
T Consensus 32 GsGKSTLl~~l~Gl 45 (208)
T 3b85_A 32 GSGKTYLAMAKAVQ 45 (208)
T ss_dssp TSSTTHHHHHHHHH
T ss_pred CCCHHHHHHHHhcC
Confidence 58999999998765
No 114
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=75.36 E-value=0.88 Score=35.39 Aligned_cols=12 Identities=33% Similarity=0.440 Sum_probs=10.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.++
T Consensus 41 GsGKSTLl~~l~ 52 (235)
T 3tif_A 41 GSGKSTMLNIIG 52 (235)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCcHHHHHHHHh
Confidence 589999999875
No 115
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=75.15 E-value=1.1 Score=33.76 Aligned_cols=14 Identities=36% Similarity=0.271 Sum_probs=11.5
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||++|.+.-.
T Consensus 32 GsGKSTl~~~l~~~ 45 (208)
T 3c8u_A 32 GSGKSTLSNPLAAA 45 (208)
T ss_dssp TSCTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999987654
No 116
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=74.85 E-value=22 Score=31.03 Aligned_cols=136 Identities=11% Similarity=0.033 Sum_probs=73.8
Q ss_pred chHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee-------------
Q psy7339 52 STFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------- 118 (223)
Q Consensus 52 s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------- 118 (223)
.+-..-..+.++.+++ ..+=+|.|-. -.+|..|...+.. ...++..+....+ ....+|+|+
T Consensus 344 ~~~a~Kaar~i~~~~~-~~iPlv~lvD-tpGf~~G~~~E~~-Gi~~~~A~~l~a~---a~~~vP~itvI~g~~~Ggg~~a 417 (523)
T 1on3_A 344 INASDKAAEFVNFCDS-FNIPLVQLVD-VPGFLPGVQQEYG-GIIRHGAKMLYAY---SEATVPKITVVLRKAYGGSYLA 417 (523)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCEEEEEE-ECCBCCCHHHHHT-THHHHHHHHHHHH---HHCCSCEEEEEEEEEEHHHHHT
T ss_pred HHHHHHHHHHHHHHHh-cCCCeEEEEe-CCCcCcchHHHHh-hHHHHHHHHHHHH---hcCCCCEEEEEeCCcccHHHHH
Confidence 3334445555555543 3333444432 2356666332211 1222223222222 237788886
Q ss_pred -------ecceeeccccccccCCCCccccchhhhc-----CHHHHHH-HH--HcCCCCCHHHHHHcCccccccCChhHHH
Q psy7339 119 -------LQATFHTPFTLRGMTPEGCSSVLFPRIF-----GNSVASE-LL--YTGRKLNAQEALQYGFVSGVFTTEEIER 183 (223)
Q Consensus 119 -------~~a~f~~pe~~~Gl~p~~g~~~~l~~~v-----g~~~a~~-l~--l~g~~~~a~eA~~~Glv~~v~~~~~l~~ 183 (223)
.+..|..|...++...+-+....+.+.- -....++ +. +.-+.-++..+.+.|+||+|+++.++.+
T Consensus 418 m~~~~~~~d~~~a~p~a~~~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~II~p~~tR~ 497 (523)
T 1on3_A 418 MCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQNAFNTPYVAAARGQVDDVIDPADTRR 497 (523)
T ss_dssp TTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHHHHSSHHHHHHTTSSSEECCGGGHHH
T ss_pred hcccCCCCCEEEEcCCCeEEecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHHhhCCHHHHHhcCCCCEeeCHHHHHH
Confidence 3567899999999888777765554431 0111111 21 1111356788999999999999877666
Q ss_pred hHHHHHHHHh
Q psy7339 184 DLWPRIHAWA 193 (223)
Q Consensus 184 ~a~~~a~~l~ 193 (223)
......+.+.
T Consensus 498 ~l~~~L~~l~ 507 (523)
T 1on3_A 498 KIASALEMYA 507 (523)
T ss_dssp HHHHHHHHGG
T ss_pred HHHHHHHHHh
Confidence 6555555543
No 117
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=74.04 E-value=3.1 Score=32.10 Aligned_cols=16 Identities=13% Similarity=0.044 Sum_probs=12.6
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
.+||||.+........
T Consensus 22 GsGKTT~ll~~~~r~~ 37 (223)
T 2b8t_A 22 FAGKTAELIRRLHRLE 37 (223)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHH
Confidence 4899999988776654
No 118
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=73.28 E-value=5.1 Score=32.38 Aligned_cols=30 Identities=10% Similarity=0.027 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhcCCCe--EEEEcCCCCCcC
Q psy7339 55 ALEMKEIAHIIQFLTPRS--LILVDELCRAGI 84 (223)
Q Consensus 55 ~~el~~~~~~l~~~~~~~--vvvl~~~g~~F~ 84 (223)
..++...+..+......+ +||+|....-..
T Consensus 164 ~~~i~~~i~~l~~~~~~~~~lVVID~l~~l~~ 195 (315)
T 3bh0_A 164 VNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEP 195 (315)
T ss_dssp HHHHHHHHHHHHHTSSSCCEEEEEECGGGSBC
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEeCchhcCC
Confidence 556666666665555678 999998875543
No 119
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=73.27 E-value=2.2 Score=32.69 Aligned_cols=16 Identities=19% Similarity=0.237 Sum_probs=13.2
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++||||++|.++...+
T Consensus 40 GsGKSTLl~~i~~~~~ 55 (251)
T 2ehv_A 40 GTGKTTFAAQFIYKGA 55 (251)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5899999999985544
No 120
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=73.15 E-value=1.1 Score=34.92 Aligned_cols=12 Identities=25% Similarity=0.304 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.++
T Consensus 41 GsGKSTLl~~l~ 52 (237)
T 2cbz_A 41 GCGKSSLLSALL 52 (237)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 589999999874
No 121
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=73.07 E-value=1.3 Score=34.68 Aligned_cols=12 Identities=42% Similarity=0.296 Sum_probs=10.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 39 GsGKSTLlk~l~ 50 (250)
T 2d2e_A 39 GAGKSTLGKILA 50 (250)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 589999999875
No 122
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=72.81 E-value=4.3 Score=33.52 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=39.5
Q ss_pred CCchhHHHHHHHHHHHHHh-hCCcccCCcceeccccce-eeeccc-ccccccccchHHHHHHHHHHHHHhcCCCeEEEEc
Q psy7339 1 MSGKSVYIKQVALLQIMAQ-VGCYVPASLAEFRLADHI-YTRIGF-NDSIECNASTFALEMKEIAHIIQFLTPRSLILVD 77 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~-~g~~vpa~~~~~~~~d~I-~~~~~~-~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~ 77 (223)
.+||||++.+++....... -.+|+..+... +.. ..+++. .+++.-....-.+++.+.++.+.......+||+|
T Consensus 71 GsGKTtLal~la~~~~~~g~~vlyi~~E~~~----~~~~a~~lG~~~~~l~i~~~~~~e~~l~~~~~l~~~~~~~lIVID 146 (349)
T 2zr9_A 71 SSGKTTVALHAVANAQAAGGIAAFIDAEHAL----DPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLVRSGALDIIVID 146 (349)
T ss_dssp TSSHHHHHHHHHHHHHHTTCCEEEEESSCCC----CHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEEECCCCc----CHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHHhcCCCCEEEEc
Confidence 4899999999987664321 12333333211 111 011110 0111111111234555556655555668999999
Q ss_pred CCCCCc
Q psy7339 78 ELCRAG 83 (223)
Q Consensus 78 ~~g~~F 83 (223)
+....+
T Consensus 147 sl~~l~ 152 (349)
T 2zr9_A 147 SVAALV 152 (349)
T ss_dssp CGGGCC
T ss_pred ChHhhc
Confidence 987665
No 123
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=72.53 E-value=23 Score=28.97 Aligned_cols=14 Identities=21% Similarity=0.271 Sum_probs=12.1
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++|||+|+.+++..
T Consensus 133 GsGKTtLAlqlA~~ 146 (331)
T 2vhj_A 133 NSGKTPLVHALGEA 146 (331)
T ss_dssp SSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 47999999999875
No 124
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=72.49 E-value=1.4 Score=33.03 Aligned_cols=14 Identities=29% Similarity=0.335 Sum_probs=11.4
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||++|.+.-.
T Consensus 16 GsGKSTl~~~l~~~ 29 (211)
T 3asz_A 16 ASGKTTLAQALART 29 (211)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999987653
No 125
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=72.41 E-value=9.4 Score=32.51 Aligned_cols=30 Identities=10% Similarity=0.072 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCCCCcC
Q psy7339 55 ALEMKEIAHIIQFLTPRSLILVDELCRAGI 84 (223)
Q Consensus 55 ~~el~~~~~~l~~~~~~~vvvl~~~g~~F~ 84 (223)
..++...+..+....+..+||+|+......
T Consensus 298 ~~~i~~~~~~l~~~~~~~livID~l~~~~~ 327 (454)
T 2r6a_A 298 VSDIRAKCRRLKQESGLGMIVIDYLQLIQG 327 (454)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEECGGGSCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEccHHHhcc
Confidence 456666666666556789999998875543
No 126
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=72.26 E-value=1.4 Score=34.93 Aligned_cols=12 Identities=42% Similarity=0.354 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 56 GsGKSTLlk~l~ 67 (267)
T 2zu0_C 56 GSGKSTLSATLA 67 (267)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 589999999875
No 127
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=72.26 E-value=1.4 Score=33.09 Aligned_cols=13 Identities=23% Similarity=0.284 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||++|.+.=
T Consensus 30 GsGKSTLl~~l~g 42 (207)
T 1znw_A 30 AVGKSTVVRCLRE 42 (207)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998753
No 128
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=72.17 E-value=5.6 Score=33.83 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCCCCcCC
Q psy7339 55 ALEMKEIAHIIQFLTPRSLILVDELCRAGIE 85 (223)
Q Consensus 55 ~~el~~~~~~l~~~~~~~vvvl~~~g~~F~a 85 (223)
..++...+..+.....+.+||+|........
T Consensus 295 ~~~l~~~~~~l~~~~~~~lIvID~l~~~~~~ 325 (444)
T 2q6t_A 295 LMEVRARARRLVSQNQVGLIIIDYLQLMSGP 325 (444)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEECGGGCBCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcChhhcCCC
Confidence 4566666666655567899999988765443
No 129
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=72.03 E-value=1.2 Score=35.28 Aligned_cols=11 Identities=36% Similarity=0.667 Sum_probs=9.7
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
++||||++|.+
T Consensus 42 GsGKSTLlk~l 52 (262)
T 1b0u_A 42 GSGKSTFLRCI 52 (262)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999976
No 130
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=72.00 E-value=1.2 Score=34.17 Aligned_cols=11 Identities=27% Similarity=0.459 Sum_probs=9.8
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
++||||++|.+
T Consensus 45 GsGKSTLlk~l 55 (214)
T 1sgw_A 45 GIGKTTLLKTI 55 (214)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999976
No 131
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=71.99 E-value=1.2 Score=34.72 Aligned_cols=11 Identities=18% Similarity=0.389 Sum_probs=9.8
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
++||||++|.+
T Consensus 42 GsGKSTLl~~l 52 (240)
T 1ji0_A 42 GAGKTTTLSAI 52 (240)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999986
No 132
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=71.66 E-value=1.2 Score=35.05 Aligned_cols=11 Identities=45% Similarity=0.519 Sum_probs=9.9
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
++||||++|.+
T Consensus 43 GsGKSTLlk~l 53 (257)
T 1g6h_A 43 GSGKSTLINVI 53 (257)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999987
No 133
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=71.62 E-value=1.2 Score=34.37 Aligned_cols=12 Identities=17% Similarity=0.299 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 44 GsGKSTLl~~l~ 55 (229)
T 2pze_A 44 GAGKTSLLMMIM 55 (229)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 589999999874
No 134
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=71.46 E-value=1.6 Score=32.13 Aligned_cols=12 Identities=42% Similarity=0.401 Sum_probs=10.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.++
T Consensus 19 GsGKSTl~~~La 30 (191)
T 1zp6_A 19 GSGKSTIAEALA 30 (191)
T ss_dssp TSCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999999874
No 135
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=71.32 E-value=1.3 Score=35.05 Aligned_cols=11 Identities=18% Similarity=0.416 Sum_probs=9.8
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
++||||++|.+
T Consensus 51 GsGKSTLlk~l 61 (256)
T 1vpl_A 51 GAGKTTTLRII 61 (256)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999976
No 136
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=71.27 E-value=1.3 Score=35.21 Aligned_cols=11 Identities=36% Similarity=0.628 Sum_probs=9.7
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
++||||++|.+
T Consensus 60 GsGKSTLlk~l 70 (263)
T 2olj_A 60 GSGKSTFLRCL 70 (263)
T ss_dssp TSSHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 58999999976
No 137
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=71.12 E-value=1.3 Score=35.16 Aligned_cols=12 Identities=50% Similarity=0.526 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 43 GsGKSTLl~~i~ 54 (266)
T 2yz2_A 43 GSGKSTLLQIVA 54 (266)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCcHHHHHHHHh
Confidence 589999999863
No 138
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=71.04 E-value=1.3 Score=34.57 Aligned_cols=12 Identities=25% Similarity=0.266 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.++
T Consensus 38 GsGKSTLl~~l~ 49 (243)
T 1mv5_A 38 GGGKSTIFSLLE 49 (243)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 589999999863
No 139
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=70.97 E-value=1.3 Score=35.19 Aligned_cols=12 Identities=25% Similarity=0.443 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.++
T Consensus 47 GsGKSTLl~~l~ 58 (266)
T 4g1u_C 47 GAGKSTLLRLLT 58 (266)
T ss_dssp TSCHHHHHHHHT
T ss_pred CCcHHHHHHHHh
Confidence 589999999874
No 140
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=70.84 E-value=1.3 Score=32.27 Aligned_cols=10 Identities=50% Similarity=0.657 Sum_probs=9.1
Q ss_pred CCchhHHHHH
Q psy7339 1 MSGKSVYIKQ 10 (223)
Q Consensus 1 ~~gks~~~~~ 10 (223)
+|||||++|.
T Consensus 19 GsGKSTl~~~ 28 (171)
T 4gp7_A 19 GSGKSTFAKK 28 (171)
T ss_dssp TSCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 5899999997
No 141
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=70.74 E-value=1.3 Score=34.67 Aligned_cols=11 Identities=45% Similarity=0.449 Sum_probs=9.8
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
+|||||++|.+
T Consensus 45 GsGKSTLl~~l 55 (247)
T 2ff7_A 45 GSGKSTLTKLI 55 (247)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999986
No 142
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=70.70 E-value=1.6 Score=34.70 Aligned_cols=16 Identities=25% Similarity=0.239 Sum_probs=13.0
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++||||+++++.-...
T Consensus 12 GaGKSTLln~L~g~~~ 27 (270)
T 3sop_A 12 GLGKSTLVNTLFKSQV 27 (270)
T ss_dssp SSSHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHhCCCC
Confidence 5899999999886543
No 143
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=70.67 E-value=1.3 Score=35.36 Aligned_cols=12 Identities=25% Similarity=0.293 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.++
T Consensus 44 GsGKSTLl~~l~ 55 (275)
T 3gfo_A 44 GVGKSTLFQNFN 55 (275)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCCHHHHHHHHH
Confidence 589999999863
No 144
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=70.29 E-value=1.4 Score=34.68 Aligned_cols=12 Identities=33% Similarity=0.487 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 36 GsGKSTLlk~l~ 47 (249)
T 2qi9_C 36 GAGKSTLLARMA 47 (249)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCcHHHHHHHHh
Confidence 589999999864
No 145
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=70.27 E-value=1.7 Score=32.84 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=12.4
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.++-..
T Consensus 35 GsGKSTll~~l~g~~ 49 (231)
T 4a74_A 35 GSGKTQLAHTLAVMV 49 (231)
T ss_dssp TSSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHH
Confidence 589999999987644
No 146
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=70.12 E-value=1.7 Score=32.24 Aligned_cols=13 Identities=15% Similarity=0.342 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||++|.+.-
T Consensus 17 GsGKSTl~~~L~~ 29 (205)
T 3tr0_A 17 GAGKTSLVRALVK 29 (205)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998753
No 147
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=69.66 E-value=1.4 Score=34.88 Aligned_cols=12 Identities=25% Similarity=0.542 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 40 GsGKSTLlk~l~ 51 (263)
T 2pjz_A 40 GSGKTTLLRAIS 51 (263)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 589999999874
No 148
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=69.33 E-value=1.5 Score=35.13 Aligned_cols=11 Identities=18% Similarity=0.377 Sum_probs=9.7
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
++||||++|.+
T Consensus 57 GsGKSTLlk~l 67 (279)
T 2ihy_A 57 GAGKTTLLNIL 67 (279)
T ss_dssp TSSHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 58999999976
No 149
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=69.19 E-value=1.5 Score=34.91 Aligned_cols=11 Identities=36% Similarity=0.262 Sum_probs=9.8
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
+|||||++|.|
T Consensus 55 GsGKSTLlk~l 65 (271)
T 2ixe_A 55 GSGKSTVAALL 65 (271)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999986
No 150
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=68.95 E-value=8.1 Score=32.98 Aligned_cols=31 Identities=10% Similarity=0.026 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhcCCCe--EEEEcCCCCCcCC
Q psy7339 55 ALEMKEIAHIIQFLTPRS--LILVDELCRAGIE 85 (223)
Q Consensus 55 ~~el~~~~~~l~~~~~~~--vvvl~~~g~~F~a 85 (223)
..++...++.+....... +||+|....-.+.
T Consensus 293 ~~~i~~~ir~l~~~~~~~~~lIVID~Lq~~~~~ 325 (444)
T 3bgw_A 293 VNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEPA 325 (444)
T ss_dssp HHHHHHHHHHHHHHSCSSCEEEEEECSTTSBCS
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEecHHhccCC
Confidence 556666666665555678 9999988765443
No 151
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=68.92 E-value=18 Score=31.65 Aligned_cols=135 Identities=10% Similarity=0.104 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee--------------
Q psy7339 53 TFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV-------------- 118 (223)
Q Consensus 53 ~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia-------------- 118 (223)
.-..-..+.++.+++.. +=+|.|-.. .+|..|...+. ....++..+....+. .+.+|+|+
T Consensus 351 ~~a~Kaarfi~~c~~~~-iPlv~lvDt-pGf~~G~~~E~-~gi~~~~Ak~l~a~a---~a~vP~itvI~g~~~GGa~~am 424 (530)
T 3iav_A 351 TASEKAARFVRTCDAFN-VPVLTFVDV-PGFLPGVDQEH-DGIIRRGAKLIFAYA---EATVPLITVITRKAFGGAYVVM 424 (530)
T ss_dssp HHHHHHHHHHHHHHHTT-CCEEEEEEE-CCBCCCHHHHH-TTHHHHHHHHHHHHH---HCCSCEEEEEEEEEEHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcC-CCEEEEeeC-CCCCccHHHHH-hhHHHHHHHHHHHHH---hCCCCEEEEEeCCcchHHHHHh
Confidence 33444555555555433 444444322 23777743221 122223332222222 37888886
Q ss_pred ------ecceeeccccccccCCCCccccchhhh-cC------HHHHHHHH--HcCCCCCHHHHHHcCccccccCChhHHH
Q psy7339 119 ------LQATFHTPFTLRGMTPEGCSSVLFPRI-FG------NSVASELL--YTGRKLNAQEALQYGFVSGVFTTEEIER 183 (223)
Q Consensus 119 ------~~a~f~~pe~~~Gl~p~~g~~~~l~~~-vg------~~~a~~l~--l~g~~~~a~eA~~~Glv~~v~~~~~l~~ 183 (223)
.+-.|..|...++...+-+....+.+. +- ...-.++. +.-+.-++-.|.+.|+||.|.++.+...
T Consensus 425 ~~~~~~~d~~~awp~a~~~Vm~~egaa~il~r~~~~~~~~d~~~~~~~~~~~y~~~~~~p~~aa~~~~vD~VIdP~~TR~ 504 (530)
T 3iav_A 425 GSKHLGADLNLAWPTAQIAVMGAQGAVNILHRRTIADAGDDAEATRARLIQEYEDALLNPYTAAERGYVDAVIMPSDTRR 504 (530)
T ss_dssp TCGGGTCSEEEECTTCEEESSCHHHHHHHHTSTTTSTTCTTCHHHHHHHHHHHHHHHSSSHHHHHTTSSSEECCGGGHHH
T ss_pred cCCCCCCCEEEEcCCceEecCCHHHHHHHHhhhhhhhcccCHHHHHHHHHHHHHHhcCCHHHHHhcCCCCcccCHHHHHH
Confidence 355678888888887766665444332 11 00111111 1111246677889999999999988776
Q ss_pred hHHHHHHHHh
Q psy7339 184 DLWPRIHAWA 193 (223)
Q Consensus 184 ~a~~~a~~l~ 193 (223)
......+.+.
T Consensus 505 ~l~~~l~~~~ 514 (530)
T 3iav_A 505 HIVRGLRQLR 514 (530)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 6555554443
No 152
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=68.41 E-value=1.9 Score=35.92 Aligned_cols=12 Identities=25% Similarity=0.423 Sum_probs=10.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 40 GsGKSTLLr~ia 51 (359)
T 3fvq_A 40 GCGKTTLLRCLA 51 (359)
T ss_dssp TSSHHHHHHHHH
T ss_pred CchHHHHHHHHh
Confidence 589999999876
No 153
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=68.28 E-value=1.6 Score=34.47 Aligned_cols=12 Identities=42% Similarity=0.290 Sum_probs=10.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.+.
T Consensus 56 GsGKSTLl~~l~ 67 (260)
T 2ghi_A 56 GSGKSTIAKLLY 67 (260)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 589999999875
No 154
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=68.11 E-value=1.6 Score=34.33 Aligned_cols=12 Identities=25% Similarity=0.304 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 41 GsGKSTLl~~l~ 52 (253)
T 2nq2_C 41 GCGKSTLLDLLL 52 (253)
T ss_dssp SSSHHHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 589999999864
No 155
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=67.93 E-value=2 Score=33.95 Aligned_cols=14 Identities=36% Similarity=0.225 Sum_probs=11.5
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||+++.+.-.
T Consensus 35 GsGKSTll~~l~g~ 48 (261)
T 2eyu_A 35 GSGKSTTIASMIDY 48 (261)
T ss_dssp TCSHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHh
Confidence 58999999987643
No 156
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=67.89 E-value=2 Score=35.75 Aligned_cols=12 Identities=33% Similarity=0.520 Sum_probs=10.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 51 GsGKSTLLr~ia 62 (355)
T 1z47_A 51 GSGKTTILRLIA 62 (355)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCcHHHHHHHHh
Confidence 589999999874
No 157
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=67.63 E-value=2 Score=35.75 Aligned_cols=12 Identities=25% Similarity=0.277 Sum_probs=10.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 39 GsGKSTLLr~ia 50 (359)
T 2yyz_A 39 GCGKTTTLLMLA 50 (359)
T ss_dssp TSSHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 589999999874
No 158
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=67.44 E-value=2 Score=35.76 Aligned_cols=12 Identities=42% Similarity=0.470 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 39 GsGKSTLLr~ia 50 (362)
T 2it1_A 39 GSGKSTLLYTIA 50 (362)
T ss_dssp TSSHHHHHHHHH
T ss_pred CchHHHHHHHHh
Confidence 589999999874
No 159
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=67.19 E-value=2.1 Score=35.85 Aligned_cols=12 Identities=25% Similarity=0.445 Sum_probs=10.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 47 GsGKSTLLr~ia 58 (372)
T 1v43_A 47 GCGKTTTLRMIA 58 (372)
T ss_dssp TSSHHHHHHHHH
T ss_pred CChHHHHHHHHH
Confidence 589999999874
No 160
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=67.03 E-value=2.1 Score=35.81 Aligned_cols=12 Identities=25% Similarity=0.445 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 39 GsGKSTLLr~ia 50 (372)
T 1g29_1 39 GCGKTTTLRMIA 50 (372)
T ss_dssp TSSHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 589999999874
No 161
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=66.76 E-value=16 Score=28.48 Aligned_cols=63 Identities=21% Similarity=0.199 Sum_probs=33.8
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
+.|||++++.++-. .+.+ +..+...+-...........+...+..+... ...++++++..
T Consensus 61 GtGKT~la~~la~~-----~~~~--------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vl~iDEid 120 (285)
T 3h4m_A 61 GTGKTLLAKAVATE-----TNAT--------------FIRVVGSELVKKFIGEGASLVKDIFKLAKEK-APSIIFIDEID 120 (285)
T ss_dssp SSSHHHHHHHHHHH-----TTCE--------------EEEEEGGGGCCCSTTHHHHHHHHHHHHHHHT-CSEEEEEETTH
T ss_pred CCcHHHHHHHHHHH-----hCCC--------------EEEEehHHHHHhccchHHHHHHHHHHHHHHc-CCeEEEEECHH
Confidence 47999999998543 2221 1111111212222334444555666655543 35799999876
Q ss_pred CCc
Q psy7339 81 RAG 83 (223)
Q Consensus 81 ~~F 83 (223)
..+
T Consensus 121 ~l~ 123 (285)
T 3h4m_A 121 AIA 123 (285)
T ss_dssp HHH
T ss_pred Hhc
Confidence 544
No 162
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=66.73 E-value=2.1 Score=35.91 Aligned_cols=12 Identities=33% Similarity=0.517 Sum_probs=10.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 39 GsGKSTLLr~ia 50 (381)
T 3rlf_A 39 GCGKSTLLRMIA 50 (381)
T ss_dssp TSSHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 589999999875
No 163
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=66.26 E-value=2.3 Score=32.94 Aligned_cols=14 Identities=36% Similarity=0.420 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||++|.+.-.
T Consensus 35 GsGKSTl~k~L~~~ 48 (245)
T 2jeo_A 35 ASGKSTVCEKIMEL 48 (245)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999987543
No 164
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=66.21 E-value=2.3 Score=31.19 Aligned_cols=12 Identities=42% Similarity=0.374 Sum_probs=10.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.+.
T Consensus 12 GaGKSTl~~~L~ 23 (189)
T 2bdt_A 12 GVGKSTTCKRLA 23 (189)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCcHHHHHHHHh
Confidence 589999999985
No 165
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=65.85 E-value=2.4 Score=30.49 Aligned_cols=13 Identities=38% Similarity=0.319 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||++|.++-
T Consensus 14 GsGKSTl~~~La~ 26 (173)
T 1kag_A 14 GAGKSTIGRQLAQ 26 (173)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999997754
No 166
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=65.35 E-value=2.4 Score=34.48 Aligned_cols=14 Identities=29% Similarity=0.316 Sum_probs=11.5
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||++|.+.-.
T Consensus 100 GsGKSTL~~~L~gl 113 (312)
T 3aez_A 100 AVGKSTTARVLQAL 113 (312)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHhh
Confidence 58999999987654
No 167
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=65.33 E-value=2.4 Score=35.43 Aligned_cols=12 Identities=42% Similarity=0.473 Sum_probs=10.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.|+
T Consensus 64 GaGKSTLlr~i~ 75 (366)
T 3tui_C 64 GAGKSTLIRCVN 75 (366)
T ss_dssp TSSHHHHHHHHH
T ss_pred CchHHHHHHHHh
Confidence 589999999875
No 168
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=64.97 E-value=31 Score=30.35 Aligned_cols=135 Identities=10% Similarity=0.008 Sum_probs=70.9
Q ss_pred chHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee-------------
Q psy7339 52 STFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV------------- 118 (223)
Q Consensus 52 s~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia------------- 118 (223)
..-..-..+.++.+++-.---+.+++. .+|..|...+.. ...++..+....+ ....+|+|+
T Consensus 365 ~~~a~Kaar~i~~a~~~~iPlv~lvDt--~Gf~~G~~~E~~-Gi~~~ga~~l~a~---~~~~VP~isvI~g~~~Ggg~~a 438 (548)
T 2bzr_A 365 INASEKAARFVRTCDCFNIPIVMLVDV--PGFLPGTDQEYN-GIIRRGAKLLYAY---GEATVPKITVITRKAYGGAYCV 438 (548)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEE--CCBCCCHHHHHT-THHHHHHHHHHHH---HHCCSCEEEEEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeec--cCCCCChHHHHh-hHHHHHHHHHHHH---hCCCCCEEEEEeCCcchHHHHH
Confidence 333444555666664433333444442 356666332211 1222222222222 236788886
Q ss_pred -------ecceeeccccccccCCCCccccchhhhc-CH------H--HHH-HHHH--cCCCCCHHHHHHcCccccccCCh
Q psy7339 119 -------LQATFHTPFTLRGMTPEGCSSVLFPRIF-GN------S--VAS-ELLY--TGRKLNAQEALQYGFVSGVFTTE 179 (223)
Q Consensus 119 -------~~a~f~~pe~~~Gl~p~~g~~~~l~~~v-g~------~--~a~-~l~l--~g~~~~a~eA~~~Glv~~v~~~~ 179 (223)
.+-.|..|...+++..+-+....+.+.- -. . ..+ ++.- .-+.-++..+.+.|+||+|+++.
T Consensus 439 m~~~~~~~d~~~awp~a~i~Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~y~~~~~~p~~~a~~g~iD~II~p~ 518 (548)
T 2bzr_A 439 MGSKDMGCDVNLAWPTAQIAVMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQEYEDTLVNPYVAAERGYVGAVIPPS 518 (548)
T ss_dssp TTCGGGTCSEEEECTTCEEESSCHHHHHHHHTCCC----------CHHHHHHHHHHHHHHHSBSHHHHHTTSSSEECCGG
T ss_pred hccccCCCCEEEEcCCCEEEecCHHHHHHHHhhhHHhhhhcccccHHHHHHHHHHHHHHhhCCHHHHHhcCCCceeeCHH
Confidence 3457888999999888777665554431 10 0 111 1111 11124557789999999999987
Q ss_pred hHHHhHHHHHHHH
Q psy7339 180 EIERDLWPRIHAW 192 (223)
Q Consensus 180 ~l~~~a~~~a~~l 192 (223)
+..+......+.+
T Consensus 519 ~tR~~l~~~L~~l 531 (548)
T 2bzr_A 519 HTRGYIGTALRLL 531 (548)
T ss_dssp GHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 7666555555444
No 169
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=64.87 E-value=2.5 Score=31.09 Aligned_cols=23 Identities=9% Similarity=0.117 Sum_probs=15.4
Q ss_pred CccccccCChhHHHhHHHHHHHH
Q psy7339 170 GFVSGVFTTEEIERDLWPRIHAW 192 (223)
Q Consensus 170 Glv~~v~~~~~l~~~a~~~a~~l 192 (223)
+..|.++..+++++...++..-+
T Consensus 160 ~~~d~vi~nd~~~~a~~~l~~~i 182 (186)
T 3a00_A 160 GAHDKVIVNDDLDKAYKELKDFI 182 (186)
T ss_dssp CCCSEEEECSSHHHHHHHHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHH
Confidence 67788877777766666655444
No 170
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=64.74 E-value=2.6 Score=31.43 Aligned_cols=14 Identities=36% Similarity=0.171 Sum_probs=11.6
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||++|.+.-.
T Consensus 39 GsGKSTl~~~L~~~ 52 (200)
T 4eun_A 39 GSGKTTIAHGVADE 52 (200)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 58999999988643
No 171
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=64.58 E-value=3 Score=30.30 Aligned_cols=15 Identities=27% Similarity=0.173 Sum_probs=12.4
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.|....
T Consensus 36 GsGKStll~ai~~~l 50 (182)
T 3kta_A 36 GSGKSNIGDAILFVL 50 (182)
T ss_dssp TSSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHH
Confidence 589999999987654
No 172
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=64.55 E-value=2.6 Score=32.09 Aligned_cols=13 Identities=31% Similarity=0.309 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||++|.+.-
T Consensus 33 GsGKSTLl~~L~g 45 (218)
T 1z6g_A 33 GVGKGTLIKKLLN 45 (218)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998754
No 173
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=64.54 E-value=2.1 Score=34.47 Aligned_cols=12 Identities=17% Similarity=0.299 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 74 GsGKSTLlk~l~ 85 (290)
T 2bbs_A 74 GAGKTSLLMMIM 85 (290)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCcHHHHHHHHh
Confidence 589999999864
No 174
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=64.21 E-value=2.6 Score=32.53 Aligned_cols=13 Identities=31% Similarity=0.350 Sum_probs=11.0
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||++|.++-
T Consensus 37 GsGKSTl~k~La~ 49 (246)
T 2bbw_A 37 GSGKGTVCQRIAQ 49 (246)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998764
No 175
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=64.14 E-value=2.7 Score=31.45 Aligned_cols=19 Identities=21% Similarity=0.268 Sum_probs=14.6
Q ss_pred CCchhHHHHHHHHHHHHHhhC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVG 21 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g 21 (223)
++||||+++.++-..- ..|
T Consensus 11 G~GKTTll~~l~g~~~--~~G 29 (189)
T 2i3b_A 11 GVGKTTLIHKASEVLK--SSG 29 (189)
T ss_dssp SSCHHHHHHHHHHHHH--HTT
T ss_pred CChHHHHHHHHHhhcc--cCC
Confidence 5899999999876544 556
No 176
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=63.95 E-value=2.7 Score=31.40 Aligned_cols=13 Identities=31% Similarity=0.386 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||++|.+.-
T Consensus 14 GaGKSTLl~~L~~ 26 (198)
T 1lvg_A 14 GAGKSTLLKKLFQ 26 (198)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998743
No 177
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=63.39 E-value=1.9 Score=35.72 Aligned_cols=12 Identities=25% Similarity=0.659 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.|+
T Consensus 36 GsGKSTLLr~ia 47 (348)
T 3d31_A 36 GAGKTLFLELIA 47 (348)
T ss_dssp THHHHHHHHHHH
T ss_pred CccHHHHHHHHH
Confidence 589999999874
No 178
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=63.21 E-value=2.7 Score=34.85 Aligned_cols=13 Identities=31% Similarity=0.192 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++++.-
T Consensus 133 GSGKTTlL~~l~g 145 (356)
T 3jvv_A 133 GSGKSTTLAAMLD 145 (356)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998743
No 179
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=62.86 E-value=34 Score=28.19 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhcCCCeEEEEcCCCCCcCC
Q psy7339 57 EMKEIAHIIQFLTPRSLILVDELCRAGIE 85 (223)
Q Consensus 57 el~~~~~~l~~~~~~~vvvl~~~g~~F~a 85 (223)
.+..++..+... ...+|+|++...-+..
T Consensus 195 ~~~~~~~~a~~~-~~~il~iDEid~l~~~ 222 (389)
T 3vfd_A 195 LVRALFAVAREL-QPSIIFIDQVDSLLCE 222 (389)
T ss_dssp HHHHHHHHHHHS-SSEEEEEETGGGGC--
T ss_pred HHHHHHHHHHhc-CCeEEEEECchhhccc
Confidence 344555555443 3579999998765543
No 180
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=62.70 E-value=3 Score=30.54 Aligned_cols=24 Identities=13% Similarity=0.080 Sum_probs=15.7
Q ss_pred cCccccccCChhHHHhHHHHHHHH
Q psy7339 169 YGFVSGVFTTEEIERDLWPRIHAW 192 (223)
Q Consensus 169 ~Glv~~v~~~~~l~~~a~~~a~~l 192 (223)
....|.++..+++++.+.++..-+
T Consensus 153 ~~~~d~~i~n~~~~~~~~~l~~~i 176 (180)
T 1kgd_A 153 AHYFDLTIINNEIDETIRHLEEAV 176 (180)
T ss_dssp GGGCSEEEECSSHHHHHHHHHHHH
T ss_pred hCCCcEEEECcCHHHHHHHHHHHH
Confidence 456788776667766666665544
No 181
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=62.39 E-value=4.5 Score=33.32 Aligned_cols=28 Identities=7% Similarity=0.014 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHhcC-CCeEEEEcCCCCC
Q psy7339 55 ALEMKEIAHIIQFLT-PRSLILVDELCRA 82 (223)
Q Consensus 55 ~~el~~~~~~l~~~~-~~~vvvl~~~g~~ 82 (223)
..++...++.+.... ++.+||+|....-
T Consensus 140 i~~i~~~ir~l~~~~gg~~lIVIDyLqlm 168 (338)
T 4a1f_A 140 IEQIRLQLRKLKSQHKELGIAFIDYLQLM 168 (338)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEechHHh
Confidence 567777777776665 7899999976543
No 182
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=61.79 E-value=3 Score=35.10 Aligned_cols=12 Identities=33% Similarity=0.343 Sum_probs=10.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.|+
T Consensus 57 GsGKSTLLr~ia 68 (390)
T 3gd7_A 57 GSGKSTLLSAFL 68 (390)
T ss_dssp TSSHHHHHHHHH
T ss_pred CChHHHHHHHHh
Confidence 589999999885
No 183
>3ohm_A Guanine nucleotide-binding protein G(Q) subunit A; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Mus musculus} PDB: 2bcj_Q* 2rgn_A* 3ah8_A*
Probab=60.90 E-value=3.7 Score=33.64 Aligned_cols=13 Identities=54% Similarity=0.917 Sum_probs=11.4
Q ss_pred CchhHHHHHHHHH
Q psy7339 2 SGKSVYIKQVALL 14 (223)
Q Consensus 2 ~gks~~~~~i~~~ 14 (223)
|||||++|+.-++
T Consensus 18 SGKSTi~KQmkii 30 (327)
T 3ohm_A 18 SGKSTFIKQMRII 30 (327)
T ss_dssp SSHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 8999999998765
No 184
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=60.89 E-value=3.3 Score=30.79 Aligned_cols=15 Identities=27% Similarity=0.180 Sum_probs=12.4
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
+|||||++|.+.-..
T Consensus 35 GsGKSTl~~~La~~l 49 (200)
T 3uie_A 35 GSGKSTLACALNQML 49 (200)
T ss_dssp TSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 589999999986654
No 185
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=60.74 E-value=3.4 Score=29.80 Aligned_cols=14 Identities=43% Similarity=0.311 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||++|.+.-.
T Consensus 18 GsGKSTl~~~l~~~ 31 (175)
T 1knq_A 18 GSGKSAVASEVAHQ 31 (175)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 58999999987543
No 186
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=60.71 E-value=56 Score=25.50 Aligned_cols=16 Identities=25% Similarity=0.140 Sum_probs=13.0
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++|||++++.++-...
T Consensus 77 GtGKT~la~~la~~l~ 92 (309)
T 3syl_A 77 GTGKTTVALKMAGLLH 92 (309)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5799999999877653
No 187
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=60.70 E-value=3.4 Score=31.67 Aligned_cols=25 Identities=8% Similarity=0.052 Sum_probs=16.5
Q ss_pred cCccccccCChhHHHhHHHHHHHHh
Q psy7339 169 YGFVSGVFTTEEIERDLWPRIHAWA 193 (223)
Q Consensus 169 ~Glv~~v~~~~~l~~~a~~~a~~l~ 193 (223)
.+..|.++..+++++...++..-+.
T Consensus 172 ~~~~d~~i~Nd~l~~a~~~l~~ii~ 196 (219)
T 1s96_A 172 YAEYDYLIVNDDFDTALTDLKTIIR 196 (219)
T ss_dssp GGGSSEEEECSSHHHHHHHHHHHHH
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHH
Confidence 3566777766777777666665553
No 188
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=60.35 E-value=4.5 Score=30.33 Aligned_cols=16 Identities=13% Similarity=0.264 Sum_probs=13.2
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++||||+++.++....
T Consensus 33 GsGKTtl~~~l~~~~~ 48 (235)
T 2w0m_A 33 GTGKTIFSLHFIAKGL 48 (235)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5899999999986554
No 189
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=60.32 E-value=3.5 Score=30.61 Aligned_cols=13 Identities=23% Similarity=0.102 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||++|.+.-
T Consensus 11 GsGKSTl~~~L~~ 23 (204)
T 2if2_A 11 GCGKSTVAQMFRE 23 (204)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CcCHHHHHHHHHH
Confidence 5899999998764
No 190
>1cip_A Protein (guanine nucleotide-binding protein alpha-1 subunit); GTPase, hydrolase; HET: GNP; 1.50A {Rattus norvegicus} SCOP: a.66.1.1 c.37.1.8 PDB: 1agr_A* 1bof_A* 1gdd_A* 1gfi_A* 1gia_A* 1gp2_A* 3ffa_A* 3ffb_A* 1gg2_A* 1git_A* 1svs_A* 1svk_A* 2zjz_A* 2zjy_A* 3ums_A* 2pz2_A* 2pz3_A* 1as0_A* 1as2_A* 1as3_A* ...
Probab=60.18 E-value=3.9 Score=33.87 Aligned_cols=13 Identities=46% Similarity=0.751 Sum_probs=11.6
Q ss_pred CchhHHHHHHHHH
Q psy7339 2 SGKSVYIKQVALL 14 (223)
Q Consensus 2 ~gks~~~~~i~~~ 14 (223)
|||||++|++-++
T Consensus 43 SGKST~~KQmkii 55 (353)
T 1cip_A 43 SGKSTIVKQMKII 55 (353)
T ss_dssp SSHHHHHHHHHHH
T ss_pred CCchhHHHHHHHh
Confidence 8999999998765
No 191
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=60.10 E-value=3.5 Score=29.97 Aligned_cols=15 Identities=13% Similarity=-0.093 Sum_probs=12.3
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.++-..
T Consensus 48 G~GKTtL~~~i~~~~ 62 (180)
T 3ec2_A 48 GVGKTHLAVATLKAI 62 (180)
T ss_dssp SSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 589999999887654
No 192
>1azs_C GS-alpha; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Bos taurus} SCOP: a.66.1.1 c.37.1.8 PDB: 1azt_A* 3c14_C* 3c15_C* 3c16_C* 1cjt_C* 1cjk_C* 1cju_C* 1cjv_C* 1tl7_C* 1cs4_C* 1u0h_C* 2gvd_C* 2gvz_C* 3e8a_C* 3g82_C* 3maa_C* 1cul_C* 3sn6_A*
Probab=60.03 E-value=3.9 Score=34.58 Aligned_cols=14 Identities=50% Similarity=0.750 Sum_probs=12.1
Q ss_pred CchhHHHHHHHHHH
Q psy7339 2 SGKSVYIKQVALLQ 15 (223)
Q Consensus 2 ~gks~~~~~i~~~~ 15 (223)
|||||++|++-++.
T Consensus 51 SGKSTi~KQmkiih 64 (402)
T 1azs_C 51 SGKSTIVKQMRILH 64 (402)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHh
Confidence 89999999997664
No 193
>4fid_A G protein alpha subunit; RAS-like domain, all-helical domain, GTP binding, nucleotide signaling protein, transducer, lipoprotein; HET: MLY MSE GDP; 2.62A {Entamoeba histolytica}
Probab=59.77 E-value=3.8 Score=33.83 Aligned_cols=13 Identities=54% Similarity=0.687 Sum_probs=10.9
Q ss_pred CchhHHHHHHHHH
Q psy7339 2 SGKSVYIKQVALL 14 (223)
Q Consensus 2 ~gks~~~~~i~~~ 14 (223)
|||||++|+.-++
T Consensus 16 SGKSTi~KQmkii 28 (340)
T 4fid_A 16 SGKSTIAKQLKIL 28 (340)
T ss_dssp SSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 8999999987654
No 194
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=59.73 E-value=3.6 Score=30.44 Aligned_cols=13 Identities=23% Similarity=0.128 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 16 GsGKSTl~~~L~~ 28 (207)
T 2j41_A 16 GVGKGTVRKRIFE 28 (207)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998643
No 195
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=59.57 E-value=1.9 Score=35.82 Aligned_cols=12 Identities=25% Similarity=0.634 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.|+
T Consensus 41 GsGKSTLLr~ia 52 (353)
T 1oxx_K 41 GAGKTTFMRIIA 52 (353)
T ss_dssp HHHHHHHHHHHH
T ss_pred CCcHHHHHHHHh
Confidence 379999999874
No 196
>2xtz_A Guanine nucleotide-binding protein alpha-1 subuni; hydrolase, G-protein signaling, SELF-activation, RAS-like DO; HET: GSP; 2.34A {Arabidopsis thaliana}
Probab=59.50 E-value=4.1 Score=33.78 Aligned_cols=13 Identities=62% Similarity=0.797 Sum_probs=11.5
Q ss_pred CchhHHHHHHHHH
Q psy7339 2 SGKSVYIKQVALL 14 (223)
Q Consensus 2 ~gks~~~~~i~~~ 14 (223)
|||||++|++.++
T Consensus 20 sGKsT~~kq~~~~ 32 (354)
T 2xtz_A 20 SGKSTIFKQIKLL 32 (354)
T ss_dssp SSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 8999999999854
No 197
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=58.99 E-value=3.5 Score=33.43 Aligned_cols=12 Identities=17% Similarity=0.487 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.+.
T Consensus 14 GaGKTTll~~l~ 25 (318)
T 1nij_A 14 GAGKTTLLRHIL 25 (318)
T ss_dssp SSSCHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999999764
No 198
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=58.76 E-value=3.8 Score=30.55 Aligned_cols=13 Identities=31% Similarity=0.406 Sum_probs=11.0
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 32 GsGKstl~~~l~~ 44 (201)
T 1rz3_A 32 RSGKTTLANQLSQ 44 (201)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998764
No 199
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=58.48 E-value=3.8 Score=33.05 Aligned_cols=13 Identities=23% Similarity=0.238 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 90 GsGKSTl~~~L~~ 102 (308)
T 1sq5_A 90 AVGKSTTARVLQA 102 (308)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999997754
No 200
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=58.42 E-value=3.8 Score=33.27 Aligned_cols=15 Identities=20% Similarity=0.275 Sum_probs=12.3
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||++|.+.=..
T Consensus 136 GsGKSTLl~lL~gl~ 150 (305)
T 2v9p_A 136 NTGKSMLCNSLIHFL 150 (305)
T ss_dssp SSSHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhhhc
Confidence 589999999987544
No 201
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=58.40 E-value=3.7 Score=34.87 Aligned_cols=13 Identities=31% Similarity=0.084 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++++.-
T Consensus 177 GSGKTTlL~allg 189 (418)
T 1p9r_A 177 GSGKSTTLYAGLQ 189 (418)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998753
No 202
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=58.39 E-value=4.6 Score=32.03 Aligned_cols=29 Identities=7% Similarity=-0.022 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCCCCc
Q psy7339 55 ALEMKEIAHIIQFLTPRSLILVDELCRAG 83 (223)
Q Consensus 55 ~~el~~~~~~l~~~~~~~vvvl~~~g~~F 83 (223)
..++.+.+.......+.++||+|+.....
T Consensus 132 ~~~l~~~~~a~~~~~~p~llilDept~~~ 160 (296)
T 1cr0_A 132 TDRLLAKLAYMRSGLGCDVIILDHISIVV 160 (296)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEEC---
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 44555555444344567899999876544
No 203
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=58.38 E-value=3.9 Score=29.12 Aligned_cols=16 Identities=19% Similarity=0.189 Sum_probs=13.0
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++||||+++.++-...
T Consensus 46 G~GKTtL~~~i~~~~~ 61 (149)
T 2kjq_A 46 GAGKSHLLQAWVAQAL 61 (149)
T ss_dssp TTTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5899999999886543
No 204
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=57.83 E-value=5.6 Score=28.28 Aligned_cols=16 Identities=25% Similarity=0.206 Sum_probs=13.1
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
.+||||++.+|....+
T Consensus 33 GsGKStil~Ai~~~l~ 48 (149)
T 1f2t_A 33 GSGKSSLLDAILVGLY 48 (149)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc
Confidence 4899999999987543
No 205
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A*
Probab=57.60 E-value=4.3 Score=35.47 Aligned_cols=18 Identities=28% Similarity=0.263 Sum_probs=14.8
Q ss_pred CCchhHHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMA 18 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~ 18 (223)
+|||||+++++...++..
T Consensus 177 GSGKSt~L~~li~sLl~~ 194 (512)
T 2ius_A 177 GSGASVGVNAMILSMLYK 194 (512)
T ss_dssp TSSHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 589999999998776653
No 206
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=57.45 E-value=3.9 Score=33.85 Aligned_cols=12 Identities=33% Similarity=0.462 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||+++.+.
T Consensus 185 GsGKSTll~~l~ 196 (361)
T 2gza_A 185 GSGKTTLMKALM 196 (361)
T ss_dssp SSCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999999873
No 207
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=57.36 E-value=35 Score=25.85 Aligned_cols=27 Identities=11% Similarity=0.258 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCCCCc
Q psy7339 56 LEMKEIAHIIQFLTPRSLILVDELCRAG 83 (223)
Q Consensus 56 ~el~~~~~~l~~~~~~~vvvl~~~g~~F 83 (223)
..+..+++..... ...+|++++....+
T Consensus 85 ~~~~~~~~~a~~~-~~~vl~iDeid~l~ 111 (262)
T 2qz4_A 85 ARVRSLFKEARAR-APCIVYIDEIDAVG 111 (262)
T ss_dssp HHHHHHHHHHHHT-CSEEEEEECC----
T ss_pred HHHHHHHHHHHhc-CCeEEEEeCcchhh
Confidence 3455555555433 35799999887543
No 208
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=56.98 E-value=12 Score=30.88 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=39.3
Q ss_pred CCchhHHHHHHHHHHHHHh-hCCcccCCcceeccccce-eeecccc-cccccccchHHHHHHHHHHHHHhcCCCeEEEEc
Q psy7339 1 MSGKSVYIKQVALLQIMAQ-VGCYVPASLAEFRLADHI-YTRIGFN-DSIECNASTFALEMKEIAHIIQFLTPRSLILVD 77 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~-~g~~vpa~~~~~~~~d~I-~~~~~~~-~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~ 77 (223)
.+|||||+.+++....... -.+|+..+.. +|.. ...++.+ +++.-....-..++.+.++.+.......+||+|
T Consensus 73 GsGKTtLal~la~~~~~~g~~vlyid~E~s----~~~~~a~~~g~~~~~l~i~~~~~~e~~~~~~~~l~~~~~~~lVVID 148 (356)
T 1u94_A 73 SSGKTTLTLQVIAAAQREGKTCAFIDAEHA----LDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVD 148 (356)
T ss_dssp TSSHHHHHHHHHHHHHHTTCCEEEEESSCC----CCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHHTCCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEeCCCC----ccHHHHHHcCCChhheeeeCCCCHHHHHHHHHHHHhccCCCEEEEc
Confidence 4899999999877654321 1223333321 1111 0111110 111101111234555666666555678999999
Q ss_pred CCCCCc
Q psy7339 78 ELCRAG 83 (223)
Q Consensus 78 ~~g~~F 83 (223)
+...-+
T Consensus 149 sl~~l~ 154 (356)
T 1u94_A 149 SVAALT 154 (356)
T ss_dssp CGGGCC
T ss_pred CHHHhc
Confidence 887555
No 209
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=56.93 E-value=5 Score=32.75 Aligned_cols=13 Identities=23% Similarity=0.207 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 102 GSGKSTl~~~L~~ 114 (321)
T 3tqc_A 102 AVGKSTTSRVLKA 114 (321)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998754
No 210
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=56.93 E-value=4.3 Score=30.12 Aligned_cols=14 Identities=36% Similarity=0.159 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||+++.+.-.
T Consensus 28 GsGKSTla~~L~~~ 41 (202)
T 3t61_A 28 GSGKSSVGEAIAEA 41 (202)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999987654
No 211
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=56.49 E-value=4.5 Score=29.07 Aligned_cols=13 Identities=31% Similarity=0.424 Sum_probs=11.0
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 12 GsGKST~a~~L~~ 24 (181)
T 1ly1_A 12 GSGKSTWAREFIA 24 (181)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998764
No 212
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=56.02 E-value=4.5 Score=30.05 Aligned_cols=13 Identities=23% Similarity=0.115 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.|.+.-
T Consensus 12 GsGKST~~~~La~ 24 (206)
T 1jjv_A 12 GSGKTTIANLFTD 24 (206)
T ss_dssp TSCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987753
No 213
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=56.01 E-value=28 Score=27.17 Aligned_cols=27 Identities=19% Similarity=0.285 Sum_probs=16.3
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCCCcCC
Q psy7339 58 MKEIAHIIQFLTPRSLILVDELCRAGIE 85 (223)
Q Consensus 58 l~~~~~~l~~~~~~~vvvl~~~g~~F~a 85 (223)
+..++..... ....++++++....+..
T Consensus 102 ~~~~~~~~~~-~~~~vl~iDEid~l~~~ 128 (297)
T 3b9p_A 102 VRALFAVARH-MQPSIIFIDEVDSLLSE 128 (297)
T ss_dssp HHHHHHHHHH-TCSEEEEEETGGGTSBC
T ss_pred HHHHHHHHHH-cCCcEEEeccHHHhccc
Confidence 4444444443 34689999988755443
No 214
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=55.84 E-value=4.6 Score=28.74 Aligned_cols=12 Identities=17% Similarity=0.044 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||+.+.+.
T Consensus 11 GsGKsT~~~~L~ 22 (173)
T 3kb2_A 11 CCFKSTVAAKLS 22 (173)
T ss_dssp SSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999999764
No 215
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=55.63 E-value=3.2 Score=33.92 Aligned_cols=12 Identities=50% Similarity=0.766 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.+.
T Consensus 181 GsGKTTll~~l~ 192 (330)
T 2pt7_A 181 GSGKTTYIKSIM 192 (330)
T ss_dssp TSCHHHHHHHGG
T ss_pred CCCHHHHHHHHh
Confidence 589999999754
No 216
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=55.44 E-value=4.4 Score=34.85 Aligned_cols=14 Identities=14% Similarity=0.285 Sum_probs=11.5
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||++|.++=.
T Consensus 148 GsGKSTLlr~L~Gl 161 (460)
T 2npi_A 148 QTGKTSLSRTLCSY 161 (460)
T ss_dssp TSSHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhCc
Confidence 48999999987644
No 217
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=55.22 E-value=4 Score=33.68 Aligned_cols=13 Identities=46% Similarity=0.631 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||++|.++=
T Consensus 180 GsGKSTLlk~L~g 192 (365)
T 1lw7_A 180 SSGKSVLVNKLAA 192 (365)
T ss_dssp TSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998654
No 218
>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- cell division, DNA translocation, KOPS, membrane; HET: DNA SAP; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A*
Probab=55.13 E-value=5 Score=35.58 Aligned_cols=18 Identities=33% Similarity=0.338 Sum_probs=15.1
Q ss_pred CCchhHHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMA 18 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~ 18 (223)
+||||++++++...++..
T Consensus 224 GSGKS~~L~tlI~sLl~~ 241 (574)
T 2iut_A 224 GSGKSVGVNAMLLSILFK 241 (574)
T ss_dssp TSSHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 589999999998887654
No 219
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=55.05 E-value=3.6 Score=31.32 Aligned_cols=12 Identities=17% Similarity=0.249 Sum_probs=6.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.+.
T Consensus 37 GsGKSTl~~~L~ 48 (231)
T 3lnc_A 37 GCGKTTVANKLL 48 (231)
T ss_dssp C----CHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999999875
No 220
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=54.85 E-value=4.9 Score=29.54 Aligned_cols=13 Identities=23% Similarity=0.271 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 10 GsGKsT~~~~L~~ 22 (205)
T 2jaq_A 10 GAGKSTISAEISK 22 (205)
T ss_dssp TSCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHH
Confidence 5899999997654
No 221
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=54.60 E-value=2.7 Score=32.16 Aligned_cols=13 Identities=31% Similarity=0.529 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||++|.+.-
T Consensus 30 GsGKSTl~~~L~~ 42 (230)
T 2vp4_A 30 GSGKTTYLNHFEK 42 (230)
T ss_dssp TSCHHHHHHTTGG
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998654
No 222
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=54.21 E-value=3.8 Score=33.29 Aligned_cols=16 Identities=25% Similarity=0.189 Sum_probs=13.1
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
.+|||+|+.+++....
T Consensus 117 GsGKT~la~~la~~~~ 132 (324)
T 2z43_A 117 GSGKTQLCHQLSVNVQ 132 (324)
T ss_dssp TSSHHHHHHHHHHHTT
T ss_pred CCCHhHHHHHHHHHHh
Confidence 4899999999887644
No 223
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=54.09 E-value=5 Score=30.17 Aligned_cols=13 Identities=31% Similarity=0.281 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||++|.+.-
T Consensus 15 GsGKSTl~~~L~~ 27 (227)
T 1cke_A 15 GAGKGTLCKAMAE 27 (227)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999997753
No 224
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=54.08 E-value=5.6 Score=33.00 Aligned_cols=14 Identities=43% Similarity=0.776 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
.|||||++|++-++
T Consensus 43 ~SGKST~~kq~~i~ 56 (362)
T 1zcb_A 43 ESGKSTFLKQMRII 56 (362)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 38999999998543
No 225
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=53.90 E-value=4.9 Score=33.46 Aligned_cols=14 Identities=36% Similarity=0.225 Sum_probs=11.6
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||+++.+.-.
T Consensus 146 GsGKTTll~~l~~~ 159 (372)
T 2ewv_A 146 GSGKSTTIASMIDY 159 (372)
T ss_dssp SSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhh
Confidence 58999999987653
No 226
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=53.28 E-value=5.3 Score=29.75 Aligned_cols=13 Identities=38% Similarity=0.440 Sum_probs=11.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++|||||++.++.
T Consensus 30 GsGKTtl~~~l~~ 42 (220)
T 2cvh_A 30 ASGKTTLALQTGL 42 (220)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4899999999987
No 227
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=53.20 E-value=5.3 Score=31.08 Aligned_cols=20 Identities=20% Similarity=0.172 Sum_probs=14.1
Q ss_pred CCchhHHHHHHHHHHHHHhhCCccc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVP 25 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vp 25 (223)
+|||||++|.++- ..|++.|
T Consensus 37 GsGKSTl~k~La~-----~Lg~~~~ 56 (252)
T 4e22_A 37 GAGKGTLCKALAE-----SLNWRLL 56 (252)
T ss_dssp TSSHHHHHHHHHH-----HTTCEEE
T ss_pred CCCHHHHHHHHHH-----hcCCCcC
Confidence 5899999997752 3366555
No 228
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=52.96 E-value=34 Score=27.85 Aligned_cols=62 Identities=15% Similarity=0.112 Sum_probs=31.9
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
+.|||+++|.++-. .+.++ ..++..+-...........+..++..... ....+|+|++..
T Consensus 127 GtGKT~la~aia~~-----~~~~~--------------~~i~~~~l~~~~~g~~~~~~~~~~~~a~~-~~~~vl~iDEid 186 (357)
T 3d8b_A 127 GTGKTLIGKCIASQ-----SGATF--------------FSISASSLTSKWVGEGEKMVRALFAVARC-QQPAVIFIDEID 186 (357)
T ss_dssp TSSHHHHHHHHHHH-----TTCEE--------------EEEEGGGGCCSSTTHHHHHHHHHHHHHHH-TCSEEEEEETHH
T ss_pred CCCHHHHHHHHHHH-----cCCeE--------------EEEehHHhhccccchHHHHHHHHHHHHHh-cCCeEEEEeCch
Confidence 47999999998643 23211 11111111111222333344555554443 346899999875
Q ss_pred CC
Q psy7339 81 RA 82 (223)
Q Consensus 81 ~~ 82 (223)
.-
T Consensus 187 ~l 188 (357)
T 3d8b_A 187 SL 188 (357)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 229
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=52.63 E-value=5.6 Score=28.85 Aligned_cols=13 Identities=23% Similarity=0.245 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 14 GsGKST~~~~La~ 26 (186)
T 3cm0_A 14 GAGKGTQASRLAQ 26 (186)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998753
No 230
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=52.43 E-value=5.7 Score=28.98 Aligned_cols=21 Identities=29% Similarity=0.331 Sum_probs=14.5
Q ss_pred CCchhHHHHHHHHHHHHHhhCCc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCY 23 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~ 23 (223)
+|||||+++.++-. |...|..
T Consensus 23 GsGKsT~~~~L~~~--l~~~~~~ 43 (186)
T 2yvu_A 23 GSGKTTIATRLADL--LQKEGYR 43 (186)
T ss_dssp TSSHHHHHHHHHHH--HHHTTCC
T ss_pred CCCHHHHHHHHHHH--HHhcCCe
Confidence 58999999987654 3444543
No 231
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=52.09 E-value=5.8 Score=28.72 Aligned_cols=21 Identities=14% Similarity=0.071 Sum_probs=14.4
Q ss_pred CCchhHHHHHHHHHHHHHhhCCc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCY 23 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~ 23 (223)
+|||||++|.+.-. |...|++
T Consensus 15 GsGKST~~~~L~~~--l~~~g~~ 35 (179)
T 2pez_A 15 GAGKTTVSMALEEY--LVCHGIP 35 (179)
T ss_dssp TSSHHHHHHHHHHH--HHHTTCC
T ss_pred CCCHHHHHHHHHHH--HhhCCCc
Confidence 58999999987653 3334644
No 232
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=52.04 E-value=3.8 Score=33.63 Aligned_cols=17 Identities=12% Similarity=0.235 Sum_probs=13.6
Q ss_pred CCchhHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIM 17 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l 17 (223)
.+|||+|+.+++....+
T Consensus 132 GsGKTtla~~la~~~~~ 148 (343)
T 1v5w_A 132 RTGKTQLSHTLCVTAQL 148 (343)
T ss_dssp TCTHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 48999999998876543
No 233
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=52.04 E-value=9 Score=34.11 Aligned_cols=26 Identities=23% Similarity=0.321 Sum_probs=13.8
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLA 34 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~ 34 (223)
+|||||+++.|. |+..|.+...+.+.
T Consensus 55 GsGKSTLL~~I~--------Gl~~P~~sG~vt~~ 80 (608)
T 3szr_A 55 SSGKSSVLEALS--------GVALPRGSGIVTRC 80 (608)
T ss_dssp TSCHHHHHHHHH--------SCC-------CCCS
T ss_pred CChHHHHHHHHh--------CCCCCCCCCeEEEc
Confidence 589999999875 55555444444443
No 234
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=51.59 E-value=78 Score=27.70 Aligned_cols=134 Identities=11% Similarity=0.076 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCCCCCCcchhhhhHHHHhHHHHhhhhhcccceee--------------
Q psy7339 53 TFALEMKEIAHIIQFLTPRSLILVDELCRAGIEPPPSCLPGERLDHYARTTEQVKNRVLLNHPVFV-------------- 118 (223)
Q Consensus 53 ~~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ia-------------- 118 (223)
+-..-..+.++.+++- .+=+|.|-.. .+|..|...+.. ...++..+....+. .+.+|+|+
T Consensus 357 ~~a~Kaarfi~lcd~~-~iPlv~lvDt-pGf~~G~~~E~~-Gi~~~gAk~l~a~a---~a~VP~itvI~g~~~Ggg~~am 430 (531)
T 3n6r_B 357 DSSRKAARFVRFCDAF-EIPLLTLIDV-PGFLPGTSQEYG-GVIKHGAKLLYAYG---EATVPMVTVITRKAYGGAYVVM 430 (531)
T ss_dssp HHHHHHHHHHHHHHHT-TCCEEEEEEE-CSBCCSHHHHHT-THHHHHHHHHHHHH---HCCSCEEEEEEEEEEHHHHHHT
T ss_pred HHHHHHHHHHHHhhcc-CCCEEEEeCC-CCCCCCHHHHHh-hHHHHHHHHHHHHH---hCCCCEEEEEcCCccchhhhhc
Confidence 3344445555555443 3444444322 356666322111 12223332222222 37788886
Q ss_pred ------ecceeeccccccccCCCCccccchhhh-cC---HHHHHHHHHcCCCCCHHHHHHcCccccccCChhHHHhHHHH
Q psy7339 119 ------LQATFHTPFTLRGMTPEGCSSVLFPRI-FG---NSVASELLYTGRKLNAQEALQYGFVSGVFTTEEIERDLWPR 188 (223)
Q Consensus 119 ------~~a~f~~pe~~~Gl~p~~g~~~~l~~~-vg---~~~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~ 188 (223)
.+-.|..|...++..++-+....+.+. +- ....+.--+.-+.-++-.|.+.|+||.|.+|.+........
T Consensus 431 ~~~~~~~d~~~awp~A~i~Vm~pegaa~Il~r~~~~~~~~~~~~~~~y~~~~~~p~~aa~~~~vD~vIdP~~TR~~l~~~ 510 (531)
T 3n6r_B 431 SSKHLRADFNYAWPTAEVAVMGAKGATEIIHRGDLGDPEKIAQHTADYEERFANPFVASERGFVDEVIQPRSTRKRVARA 510 (531)
T ss_dssp TCGGGTCSEEEECTTCEEESSCHHHHHHHHCCTTTTSTTHHHHHHHHHHHHHSSSHHHHHHTSSSEECCGGGHHHHHHHH
T ss_pred cCccCCCCeEEEcCCceEecCCHHHHHHHHhcccccchhHHHHHHHHHHHHhcCHHHHHhcCccCcccCHHHHHHHHHHH
Confidence 345678888888877766665444332 11 11111111112224566788999999999988876655544
Q ss_pred HHHH
Q psy7339 189 IHAW 192 (223)
Q Consensus 189 a~~l 192 (223)
.+.+
T Consensus 511 l~~~ 514 (531)
T 3n6r_B 511 FASL 514 (531)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 4433
No 235
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=51.51 E-value=5.5 Score=34.94 Aligned_cols=12 Identities=42% Similarity=0.457 Sum_probs=10.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 57 GaGKSTLlk~l~ 68 (538)
T 1yqt_A 57 GTGKSTAVKILA 68 (538)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 589999999875
No 236
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=51.45 E-value=5.9 Score=29.44 Aligned_cols=13 Identities=31% Similarity=0.358 Sum_probs=10.4
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 31 GsGKSTl~~~L~~ 43 (207)
T 2qt1_A 31 NSGKTTLAKNLQK 43 (207)
T ss_dssp TSSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987653
No 237
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=51.40 E-value=6 Score=28.42 Aligned_cols=13 Identities=23% Similarity=0.273 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.|.+.-
T Consensus 13 GsGKST~a~~La~ 25 (178)
T 1qhx_A 13 SAGKSGIVRCLQS 25 (178)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998653
No 238
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=51.37 E-value=5.6 Score=28.14 Aligned_cols=11 Identities=45% Similarity=0.501 Sum_probs=9.5
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
+|||||+.+.+
T Consensus 11 GsGKsT~a~~L 21 (179)
T 3lw7_A 11 GSGKSEFAKLL 21 (179)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999976
No 239
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=51.33 E-value=3.3 Score=33.56 Aligned_cols=12 Identities=25% Similarity=0.343 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.+.
T Consensus 90 GsGKSTLl~ll~ 101 (306)
T 3nh6_A 90 GAGKSTILRLLF 101 (306)
T ss_dssp CHHHHHHHHHHT
T ss_pred CchHHHHHHHHH
Confidence 589999999764
No 240
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=50.49 E-value=32 Score=27.47 Aligned_cols=64 Identities=17% Similarity=0.106 Sum_probs=33.6
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
+.|||+++|.++-. .+.+ +..++..+-........-..+.+++...... ...+|++++..
T Consensus 61 GtGKT~la~aia~~-----~~~~--------------~~~v~~~~l~~~~~g~~~~~~~~~f~~a~~~-~~~vl~iDEid 120 (322)
T 3eie_A 61 GTGKSYLAKAVATE-----ANST--------------FFSVSSSDLVSKWMGESEKLVKQLFAMAREN-KPSIIFIDQVD 120 (322)
T ss_dssp SSCHHHHHHHHHHH-----HTCE--------------EEEEEHHHHHTTTGGGHHHHHHHHHHHHHHT-SSEEEEEECGG
T ss_pred CCcHHHHHHHHHHH-----HCCC--------------EEEEchHHHhhcccchHHHHHHHHHHHHHhc-CCeEEEechhh
Confidence 47999999998653 2221 1111111111222233334455555555543 45799999887
Q ss_pred CCcC
Q psy7339 81 RAGI 84 (223)
Q Consensus 81 ~~F~ 84 (223)
.-..
T Consensus 121 ~l~~ 124 (322)
T 3eie_A 121 ALTG 124 (322)
T ss_dssp GGSC
T ss_pred hhhc
Confidence 5433
No 241
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=50.44 E-value=5.1 Score=34.97 Aligned_cols=11 Identities=27% Similarity=0.528 Sum_probs=9.6
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
+|||||+++++
T Consensus 270 GSGKTTlL~aL 280 (511)
T 2oap_1 270 ASGKTTTLNAI 280 (511)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999975
No 242
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=50.20 E-value=3.4 Score=33.37 Aligned_cols=18 Identities=22% Similarity=0.123 Sum_probs=14.4
Q ss_pred CCchhHHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMA 18 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~ 18 (223)
.+|||+|+.+++....+.
T Consensus 108 gsGKT~la~~la~~~~l~ 125 (322)
T 2i1q_A 108 GSGKTQIMHQSCVNLQNP 125 (322)
T ss_dssp TSSHHHHHHHHHHHTTCG
T ss_pred CCCHHHHHHHHHHHHhcc
Confidence 489999999998875443
No 243
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=50.14 E-value=6.5 Score=28.80 Aligned_cols=12 Identities=25% Similarity=0.290 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 39 g~GKSTLl~~l~ 50 (191)
T 1oix_A 39 GVGKSNLLSRFT 50 (191)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 489999999864
No 244
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=50.06 E-value=6.4 Score=29.82 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=13.6
Q ss_pred CCchhHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIM 17 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l 17 (223)
.+||||++++++....+
T Consensus 34 GsGKTtl~~~l~~~~~~ 50 (243)
T 1n0w_A 34 RTGKTQICHTLAVTCQL 50 (243)
T ss_dssp TSSHHHHHHHHHHHTTS
T ss_pred CCcHHHHHHHHHHHHhC
Confidence 48999999998876544
No 245
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=50.00 E-value=6.2 Score=31.79 Aligned_cols=15 Identities=20% Similarity=0.180 Sum_probs=12.1
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.++-..
T Consensus 110 GsGKTTll~~Lag~l 124 (302)
T 3b9q_A 110 GGGKTTSLGKLAHRL 124 (302)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 589999999877543
No 246
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=49.98 E-value=8.2 Score=33.58 Aligned_cols=18 Identities=22% Similarity=0.305 Sum_probs=14.0
Q ss_pred CCchhHHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMA 18 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~ 18 (223)
++||||+++.+.+.-++.
T Consensus 49 GsGKSTL~~~~ll~Gl~~ 66 (525)
T 1tf7_A 49 GTGKTLFSIQFLYNGIIE 66 (525)
T ss_dssp TSSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 589999999986555554
No 247
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=49.96 E-value=6.5 Score=29.12 Aligned_cols=14 Identities=29% Similarity=0.135 Sum_probs=11.7
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||+.|.++-.
T Consensus 35 GsGKsTl~~~La~~ 48 (199)
T 3vaa_A 35 GAGKTTLGKAFARK 48 (199)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999998754
No 248
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=49.85 E-value=6.6 Score=28.51 Aligned_cols=13 Identities=15% Similarity=0.169 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 13 GsGKsT~a~~L~~ 25 (196)
T 1tev_A 13 GAGKGTQCARIVE 25 (196)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998653
No 249
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=49.77 E-value=6.6 Score=28.44 Aligned_cols=13 Identities=8% Similarity=-0.118 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 13 GsGKsT~~~~L~~ 25 (192)
T 1kht_A 13 GVGSTTSSQLAMD 25 (192)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998764
No 250
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=49.62 E-value=37 Score=27.26 Aligned_cols=28 Identities=18% Similarity=0.183 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCCCCcC
Q psy7339 56 LEMKEIAHIIQFLTPRSLILVDELCRAGI 84 (223)
Q Consensus 56 ~el~~~~~~l~~~~~~~vvvl~~~g~~F~ 84 (223)
..+.++++.... ....+|++++....+.
T Consensus 92 ~~~~~lf~~a~~-~~~~vl~iDEid~l~~ 119 (322)
T 1xwi_A 92 KLVKNLFQLARE-NKPSIIFIDEIDSLCG 119 (322)
T ss_dssp HHHHHHHHHHHH-TSSEEEEEETTTGGGC
T ss_pred HHHHHHHHHHHh-cCCcEEEeecHHHhcc
Confidence 344555555543 3458999998875443
No 251
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=49.62 E-value=6.7 Score=28.83 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=14.5
Q ss_pred CCchhHHHHHHHHHHHHHhhCCc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCY 23 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~ 23 (223)
++||||+++.+.-. +...|..
T Consensus 16 GsGKTTl~~~l~~~--l~~~g~~ 36 (174)
T 1np6_A 16 GTGKTTLLKKLIPA--LCARGIR 36 (174)
T ss_dssp TSCHHHHHHHHHHH--HHHTTCC
T ss_pred CCCHHHHHHHHHHh--ccccCCc
Confidence 48999999987643 4455543
No 252
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=49.40 E-value=5.2 Score=35.15 Aligned_cols=12 Identities=33% Similarity=0.390 Sum_probs=10.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 35 GaGKSTLlkiL~ 46 (538)
T 3ozx_A 35 GVGKTTVLKILA 46 (538)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCcHHHHHHHHh
Confidence 589999999875
No 253
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=49.33 E-value=16 Score=31.45 Aligned_cols=29 Identities=7% Similarity=-0.022 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCCCCc
Q psy7339 55 ALEMKEIAHIIQFLTPRSLILVDELCRAG 83 (223)
Q Consensus 55 ~~el~~~~~~l~~~~~~~vvvl~~~g~~F 83 (223)
..++...++.+.....+++||+|......
T Consensus 339 ~~~i~~~i~~~~~~~~~~lvVID~l~~l~ 367 (503)
T 1q57_A 339 TDRLLAKLAYMRSGLGCDVIILDHISIVV 367 (503)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECTTCCC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEccchhcC
Confidence 45566555555555578999999876543
No 254
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=49.27 E-value=8 Score=30.36 Aligned_cols=14 Identities=36% Similarity=0.297 Sum_probs=12.1
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++|||||++.++..
T Consensus 40 GsGKTtl~~~l~~~ 53 (279)
T 1nlf_A 40 GAGKSMLALQLAAQ 53 (279)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 48999999999874
No 255
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=49.24 E-value=41 Score=28.54 Aligned_cols=14 Identities=29% Similarity=0.332 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||++..++..
T Consensus 107 GsGKTTt~~kLA~~ 120 (433)
T 3kl4_A 107 GSGKTTTAGKLAYF 120 (433)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999888743
No 256
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=49.21 E-value=8.9 Score=28.71 Aligned_cols=16 Identities=25% Similarity=0.206 Sum_probs=13.2
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
.+||||++..|.....
T Consensus 33 gsGKStil~ai~~~l~ 48 (203)
T 3qks_A 33 GSGKSSLLDAILVGLY 48 (203)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc
Confidence 4899999999876655
No 257
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=48.80 E-value=7 Score=28.42 Aligned_cols=13 Identities=23% Similarity=0.373 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 15 GsGKST~~~~L~~ 27 (193)
T 2rhm_A 15 ATGKTTLSQALAT 27 (193)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998754
No 258
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=48.79 E-value=6.4 Score=33.52 Aligned_cols=14 Identities=21% Similarity=0.112 Sum_probs=11.4
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||+++.++-.
T Consensus 52 GaGKSTLln~L~G~ 65 (427)
T 2qag_B 52 GLGKSTLMDTLFNT 65 (427)
T ss_dssp TSSSHHHHHHHHTS
T ss_pred CCCHHHHHHHHhCc
Confidence 58999999998543
No 259
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=48.77 E-value=25 Score=27.87 Aligned_cols=15 Identities=27% Similarity=0.033 Sum_probs=12.3
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
+.|||++.|+|+-..
T Consensus 46 GtGKT~la~aiA~~l 60 (293)
T 3t15_A 46 GQGKSFQCELVFRKM 60 (293)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 479999999987644
No 260
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=48.67 E-value=7 Score=28.29 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=13.8
Q ss_pred CCchhHHHHHHHHHHHHHhhCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGC 22 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~ 22 (223)
+|||||+++.+.-. |.+.|.
T Consensus 11 GsGKsT~~~~L~~~--l~~~g~ 30 (194)
T 1nks_A 11 GVGKSTVLAKVKEI--LDNQGI 30 (194)
T ss_dssp TSCHHHHHHHHHHH--HHTTTC
T ss_pred CCCHHHHHHHHHHH--HHhcCc
Confidence 58999999987653 344443
No 261
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=48.46 E-value=28 Score=23.88 Aligned_cols=13 Identities=23% Similarity=0.248 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+|||++++.+.-
T Consensus 11 ~~GKSsli~~l~~ 23 (161)
T 2dyk_A 11 NVGKSSLFNRLLK 23 (161)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHhC
Confidence 3799999998763
No 262
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=47.94 E-value=6 Score=30.51 Aligned_cols=15 Identities=20% Similarity=0.129 Sum_probs=12.2
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.|+-..
T Consensus 37 GsGKSTll~~i~g~~ 51 (227)
T 1qhl_A 37 GAGKSTTMAAFVTAL 51 (227)
T ss_dssp SHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhccc
Confidence 489999999987643
No 263
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=47.93 E-value=7.1 Score=31.52 Aligned_cols=15 Identities=20% Similarity=0.188 Sum_probs=12.1
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.++-..
T Consensus 112 GsGKTTll~~Lagll 126 (304)
T 1rj9_A 112 GVGKTTTIAKLGRYY 126 (304)
T ss_dssp TSSHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 589999999887543
No 264
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=47.87 E-value=1.4e+02 Score=26.04 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=32.8
Q ss_pred CHHHHHHHHHcCCCCCHHHH-------HHcCccccccCCh-hHHHhHHHHHHHH
Q psy7339 147 GNSVASELLYTGRKLNAQEA-------LQYGFVSGVFTTE-EIERDLWPRIHAW 192 (223)
Q Consensus 147 g~~~a~~l~l~g~~~~a~eA-------~~~Glv~~v~~~~-~l~~~a~~~a~~l 192 (223)
|+...+. .+|+.+++++. ...|++|.++++| +..+.++++..-+
T Consensus 207 GP~vi~~--~~ge~v~~e~LGGa~~h~~~sGv~d~va~de~~a~~~~r~~ls~l 258 (530)
T 3iav_A 207 GPDVIKT--VTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYL 258 (530)
T ss_dssp CHHHHHH--HHCCCCCHHHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHHHS
T ss_pred CHHHHHH--HhCCcCChhhcchHHHHHhccCceeEEecChHHHHHHHHHHHHhc
Confidence 5554443 57899999875 6899999999886 4677777777665
No 265
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=47.85 E-value=7.4 Score=28.00 Aligned_cols=13 Identities=38% Similarity=0.373 Sum_probs=11.1
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.|.++-
T Consensus 14 GsGKsTla~~La~ 26 (175)
T 1via_A 14 GSGKSTLARALAK 26 (175)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998864
No 266
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=47.21 E-value=7.3 Score=32.10 Aligned_cols=14 Identities=21% Similarity=0.107 Sum_probs=11.5
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||++|.|.=.
T Consensus 81 GaGKTTLl~~I~g~ 94 (347)
T 2obl_A 81 GVGKSTLLGMICNG 94 (347)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcC
Confidence 58999999987654
No 267
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=47.20 E-value=4.9 Score=29.87 Aligned_cols=13 Identities=15% Similarity=0.296 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 10 GsGKsTl~~~L~~ 22 (214)
T 1gtv_A 10 GAGKRTLVEKLSG 22 (214)
T ss_dssp EEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4899999998654
No 268
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=46.96 E-value=7.1 Score=34.84 Aligned_cols=12 Identities=42% Similarity=0.357 Sum_probs=10.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 113 GaGKSTLLkiL~ 124 (608)
T 3j16_B 113 GIGKSTALKILA 124 (608)
T ss_dssp TSSHHHHHHHHH
T ss_pred CChHHHHHHHHh
Confidence 589999999875
No 269
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=46.87 E-value=7.3 Score=33.76 Aligned_cols=14 Identities=21% Similarity=0.157 Sum_probs=11.5
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||++|.++-.
T Consensus 39 GsGKSTLl~~l~Gl 52 (483)
T 3euj_A 39 GAGKSTTMAGFVTA 52 (483)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhcC
Confidence 58999999987643
No 270
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=46.84 E-value=7.8 Score=28.44 Aligned_cols=12 Identities=25% Similarity=0.290 Sum_probs=10.1
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 15 g~GKSTLl~~l~ 26 (199)
T 2f9l_A 15 GVGKSNLLSRFT 26 (199)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 479999999875
No 271
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=46.66 E-value=7.9 Score=28.09 Aligned_cols=22 Identities=32% Similarity=0.410 Sum_probs=14.5
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
+|||||+.+.+.-. |...|+++
T Consensus 10 GsGKsT~~~~L~~~--l~~~g~~~ 31 (195)
T 2pbr_A 10 GSGKTTQAKKLYEY--LKQKGYFV 31 (195)
T ss_dssp TSCHHHHHHHHHHH--HHHTTCCE
T ss_pred CCCHHHHHHHHHHH--HHHCCCeE
Confidence 58999999987543 23346543
No 272
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=46.58 E-value=60 Score=26.03 Aligned_cols=15 Identities=20% Similarity=0.109 Sum_probs=12.2
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
+.|||++++.+.-..
T Consensus 54 G~GKT~l~~~~~~~~ 68 (387)
T 2v1u_A 54 GTGKTAVARLVLRRL 68 (387)
T ss_dssp TSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 579999999987544
No 273
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=46.37 E-value=7.7 Score=31.14 Aligned_cols=12 Identities=25% Similarity=0.351 Sum_probs=10.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||+++.+.
T Consensus 175 G~GKSTLln~l~ 186 (302)
T 2yv5_A 175 GVGKSSILSRLT 186 (302)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 479999999976
No 274
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=46.21 E-value=5.3 Score=29.30 Aligned_cols=12 Identities=33% Similarity=0.493 Sum_probs=9.9
Q ss_pred CchhHHHHHHHH
Q psy7339 2 SGKSVYIKQVAL 13 (223)
Q Consensus 2 ~gks~~~~~i~~ 13 (223)
|||||+++.+.=
T Consensus 13 sGKSTL~~~L~~ 24 (171)
T 2f1r_A 13 SGKTTLITRMMP 24 (171)
T ss_dssp HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 799999998654
No 275
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=46.07 E-value=7.9 Score=29.76 Aligned_cols=13 Identities=31% Similarity=0.204 Sum_probs=11.2
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||++|.++-
T Consensus 59 G~GKTtl~~~i~~ 71 (254)
T 1ixz_A 59 GVGKTHLARAVAG 71 (254)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998874
No 276
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=46.06 E-value=50 Score=33.97 Aligned_cols=81 Identities=19% Similarity=0.164 Sum_probs=42.3
Q ss_pred CCchhHHHHHHHHHHHHHh-hCCcccCCcceeccccceeeecc-cccccccccchHHHHHHHHHHHHHhcCCCeEEEEcC
Q psy7339 1 MSGKSVYIKQVALLQIMAQ-VGCYVPASLAEFRLADHIYTRIG-FNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDE 78 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~-~g~~vpa~~~~~~~~d~I~~~~~-~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~ 78 (223)
..|||+|+.+++....... -.+|+..+...-.+. ..+++ +.+++.-....-.+++.+.++.+.......+||+|+
T Consensus 742 G~GKTtLalqlA~~~a~~g~~VlyiS~Ees~~ql~---A~rlG~~~~~l~i~~~~~i~~i~~~~r~l~~~~~~~LVIIDs 818 (2050)
T 3cmu_A 742 SSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIY---ARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDS 818 (2050)
T ss_dssp TSSHHHHHHHHHHHHHTTTCCEEEECTTSCCCHHH---HHHTTCCTTTCEEECCSSHHHHHHHHHHHHHHTCCSEEEESC
T ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEECCCcHHHHH---HHHcCCCccceEEecCCCHHHHHHHHHHHhhccCCCEEEEcc
Confidence 3799999999998765321 123333332110000 00111 011111112233556666666665556789999999
Q ss_pred CCCCcC
Q psy7339 79 LCRAGI 84 (223)
Q Consensus 79 ~g~~F~ 84 (223)
...-|.
T Consensus 819 Lq~i~~ 824 (2050)
T 3cmu_A 819 VAALTP 824 (2050)
T ss_dssp GGGCCC
T ss_pred hhhhcc
Confidence 876664
No 277
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=45.88 E-value=7.8 Score=31.67 Aligned_cols=14 Identities=36% Similarity=0.337 Sum_probs=11.4
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
.+||||+++.++-.
T Consensus 65 GaGKSTLl~~l~g~ 78 (337)
T 2qm8_A 65 GVGKSTTIDALGSL 78 (337)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHh
Confidence 48999999987643
No 278
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=45.87 E-value=8.2 Score=28.88 Aligned_cols=26 Identities=0% Similarity=-0.180 Sum_probs=15.7
Q ss_pred HcCccccccCChhHHHhHHHHHHHHh
Q psy7339 168 QYGFVSGVFTTEEIERDLWPRIHAWA 193 (223)
Q Consensus 168 ~~Glv~~v~~~~~l~~~a~~~a~~l~ 193 (223)
.....|.++-.+++++...++..-+.
T Consensus 162 ~~~~~d~vivN~~~~~~~~~l~~~i~ 187 (208)
T 3tau_A 162 MMASYDYAVVNDVVANAVQKIKGIVE 187 (208)
T ss_dssp HGGGSSEEEECSSHHHHHHHHHHHHH
T ss_pred hhccCCEEEECcCHHHHHHHHHHHHH
Confidence 34456777655666666666655553
No 279
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=45.86 E-value=8.2 Score=28.45 Aligned_cols=13 Identities=31% Similarity=0.082 Sum_probs=11.0
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 14 GsGKsT~~~~L~~ 26 (213)
T 2plr_A 14 GSGKSSQATLLKD 26 (213)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998764
No 280
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=45.86 E-value=8 Score=30.54 Aligned_cols=13 Identities=38% Similarity=0.378 Sum_probs=11.0
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||++|.++-
T Consensus 54 GtGKTtLakala~ 66 (274)
T 2x8a_A 54 GCGKTLLAKAVAN 66 (274)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 5899999998764
No 281
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=45.80 E-value=7.7 Score=34.02 Aligned_cols=12 Identities=33% Similarity=0.573 Sum_probs=10.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.+.
T Consensus 322 GsGKSTLlk~l~ 333 (538)
T 1yqt_A 322 GIGKTTFVKMLA 333 (538)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 589999999874
No 282
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=45.68 E-value=7.7 Score=34.62 Aligned_cols=12 Identities=33% Similarity=0.573 Sum_probs=10.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.+.
T Consensus 392 GsGKSTLlk~l~ 403 (607)
T 3bk7_A 392 GIGKTTFVKMLA 403 (607)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 589999999874
No 283
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=45.60 E-value=8.3 Score=28.64 Aligned_cols=13 Identities=38% Similarity=0.373 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 22 GsGKsTl~~~L~~ 34 (204)
T 2qor_A 22 GVGKGTLIKKVLS 34 (204)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998644
No 284
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=45.49 E-value=8.3 Score=28.87 Aligned_cols=12 Identities=42% Similarity=0.332 Sum_probs=10.1
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||+++.+.
T Consensus 14 GSGKST~~~~L~ 25 (218)
T 1vht_A 14 GSGKSTVANAFA 25 (218)
T ss_dssp TSCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999998775
No 285
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=45.28 E-value=7.1 Score=28.12 Aligned_cols=12 Identities=17% Similarity=0.105 Sum_probs=6.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||+.+.+.
T Consensus 15 GsGKST~a~~La 26 (183)
T 2vli_A 15 GVGKTHTAHTLH 26 (183)
T ss_dssp ----CHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999999864
No 286
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=45.17 E-value=8.1 Score=32.72 Aligned_cols=12 Identities=42% Similarity=0.578 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||+++.+.
T Consensus 79 GaGKSTLln~L~ 90 (413)
T 1tq4_A 79 GSGKSSFINTLR 90 (413)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCcHHHHHHHHh
Confidence 489999999874
No 287
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=45.17 E-value=8.6 Score=28.02 Aligned_cols=22 Identities=36% Similarity=0.338 Sum_probs=14.6
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
+|||||.++.+.- .|...|+.+
T Consensus 10 GsGKsT~~~~L~~--~l~~~g~~v 31 (197)
T 2z0h_A 10 GSGKSTQIQLLAQ--YLEKRGKKV 31 (197)
T ss_dssp TSSHHHHHHHHHH--HHHHCCC-E
T ss_pred CCCHHHHHHHHHH--HHHHCCCeE
Confidence 5899999998654 334447654
No 288
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=44.45 E-value=27 Score=28.63 Aligned_cols=14 Identities=36% Similarity=0.247 Sum_probs=11.1
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
.|||||+.+.++..
T Consensus 17 gSGKTtla~~La~~ 30 (340)
T 3d3q_A 17 ASGKTELSIEVAKK 30 (340)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHH
Confidence 48999999887653
No 289
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=44.43 E-value=9 Score=27.14 Aligned_cols=13 Identities=31% Similarity=0.179 Sum_probs=10.4
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 10 GsGKsT~a~~L~~ 22 (168)
T 2pt5_A 10 CSGKSTVGSLLSR 22 (168)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987654
No 290
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=44.21 E-value=8.7 Score=31.38 Aligned_cols=14 Identities=36% Similarity=0.328 Sum_probs=11.8
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||+++.++-.
T Consensus 139 GaGKTTll~~Lag~ 152 (328)
T 3e70_C 139 GSGKTTTIAKLANW 152 (328)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999998753
No 291
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=44.14 E-value=9.2 Score=27.59 Aligned_cols=13 Identities=31% Similarity=0.240 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||+++.+.-
T Consensus 21 GsGKst~~~~l~~ 33 (180)
T 3iij_A 21 GVGKTTLGKELAS 33 (180)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999997763
No 292
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=43.42 E-value=9.6 Score=27.11 Aligned_cols=13 Identities=15% Similarity=0.107 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 12 GsGKsT~a~~La~ 24 (173)
T 1e6c_A 12 GCGMTTVGRELAR 24 (173)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987654
No 293
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=43.17 E-value=7.4 Score=34.16 Aligned_cols=12 Identities=17% Similarity=0.362 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 304 GsGKSTLl~~l~ 315 (538)
T 3ozx_A 304 GIGKTTFARILV 315 (538)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 589999999874
No 294
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=42.93 E-value=9.3 Score=31.69 Aligned_cols=15 Identities=20% Similarity=0.180 Sum_probs=12.1
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.++-..
T Consensus 167 GsGKTTll~~Lag~l 181 (359)
T 2og2_A 167 GGGKTTSLGKLAHRL 181 (359)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhhc
Confidence 589999999876543
No 295
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=42.76 E-value=7.5 Score=34.67 Aligned_cols=12 Identities=33% Similarity=0.437 Sum_probs=10.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 127 GsGKSTLlkiL~ 138 (607)
T 3bk7_A 127 GTGKTTAVKILA 138 (607)
T ss_dssp TSSHHHHHHHHT
T ss_pred CChHHHHHHHHh
Confidence 589999999875
No 296
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=42.64 E-value=13 Score=28.10 Aligned_cols=16 Identities=19% Similarity=0.353 Sum_probs=13.1
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++|||||+.+++....
T Consensus 33 GsGKTtl~~~~~~~~~ 48 (247)
T 2dr3_A 33 GTGKTIFSQQFLWNGL 48 (247)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5899999988877664
No 297
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=42.64 E-value=9.8 Score=28.10 Aligned_cols=13 Identities=38% Similarity=0.250 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 20 GsGKST~~~~L~~ 32 (212)
T 2wwf_A 20 RSGKSTQSKLLVE 32 (212)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999997764
No 298
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=42.58 E-value=9.9 Score=28.38 Aligned_cols=14 Identities=29% Similarity=0.264 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||+++.+.-.
T Consensus 35 GsGKsT~~~~l~~~ 48 (211)
T 1m7g_A 35 ASGKSTLAVELEHQ 48 (211)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999987543
No 299
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=42.56 E-value=12 Score=29.95 Aligned_cols=15 Identities=33% Similarity=0.049 Sum_probs=11.6
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
+|||||+++.+.-..
T Consensus 41 GsGKSTla~~L~~~l 55 (290)
T 1odf_A 41 GSGKSFTSIQIYNHL 55 (290)
T ss_dssp TSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 589999999765543
No 300
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=42.53 E-value=9.2 Score=34.13 Aligned_cols=12 Identities=42% Similarity=0.531 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.++
T Consensus 388 GsGKSTLlk~l~ 399 (608)
T 3j16_B 388 GTGKTTLIKLLA 399 (608)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCcHHHHHHHHh
Confidence 589999999875
No 301
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=42.40 E-value=9.7 Score=29.81 Aligned_cols=13 Identities=31% Similarity=0.204 Sum_probs=11.2
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||++|.++-
T Consensus 83 GtGKTtl~~~i~~ 95 (278)
T 1iy2_A 83 GVGKTHLARAVAG 95 (278)
T ss_dssp TSSHHHHHHHHHH
T ss_pred cChHHHHHHHHHH
Confidence 5899999998874
No 302
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=42.31 E-value=9.5 Score=32.52 Aligned_cols=14 Identities=36% Similarity=0.320 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||+++.|+=.
T Consensus 167 GsGKSTLl~~Iag~ 180 (438)
T 2dpy_A 167 GVGKSVLLGMMARY 180 (438)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcc
Confidence 58999999987654
No 303
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=42.13 E-value=9.6 Score=33.19 Aligned_cols=14 Identities=29% Similarity=0.233 Sum_probs=11.6
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||+++.++-.
T Consensus 303 GSGKTTLl~~LAgl 316 (503)
T 2yhs_A 303 GVGKTTTIGKLARQ 316 (503)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHH
Confidence 58999999987643
No 304
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=42.13 E-value=10 Score=27.37 Aligned_cols=13 Identities=23% Similarity=0.192 Sum_probs=10.4
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 16 GsGKsT~~~~L~~ 28 (194)
T 1qf9_A 16 GSGKGTQCANIVR 28 (194)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999887654
No 305
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=42.05 E-value=74 Score=29.37 Aligned_cols=77 Identities=10% Similarity=0.050 Sum_probs=37.7
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeeccccccc--ccccchHHHHHHHHHHHHHhcCCCeEEEEcC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSI--ECNASTFALEMKEIAHIIQFLTPRSLILVDE 78 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~--~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~ 78 (223)
+.|||++++.++.... .-..+..-....+...| ..+-. ......+...+..+++.+...+...++++++
T Consensus 201 G~GKT~la~~la~~l~--~~~~p~~l~~~~~~~l~-------~~~l~~g~~~~g~~~~~l~~~~~~~~~~~~~~iL~IDE 271 (854)
T 1qvr_A 201 GVGKTAIVEGLAQRIV--KGDVPEGLKGKRIVSLQ-------MGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDE 271 (854)
T ss_dssp TSCHHHHHHHHHHHHH--HTCSCTTSTTCEEEEEC-------C-----------CHHHHHHHHHHHHHTTCSSEEEEECC
T ss_pred CCCHHHHHHHHHHHHh--cCCCchhhcCCeEEEee-------hHHhhccCccchHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 5799999999887653 22222111122211111 11110 1223456667888888887765668888998
Q ss_pred CCCCcCCC
Q psy7339 79 LCRAGIEP 86 (223)
Q Consensus 79 ~g~~F~aG 86 (223)
...-...+
T Consensus 272 i~~l~~~~ 279 (854)
T 1qvr_A 272 LHTVVGAG 279 (854)
T ss_dssp C-------
T ss_pred HHHHhccC
Confidence 87554443
No 306
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=41.96 E-value=10 Score=27.80 Aligned_cols=13 Identities=23% Similarity=0.212 Sum_probs=10.4
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||.++.+.-
T Consensus 14 GsGKsT~~~~L~~ 26 (204)
T 2v54_A 14 KSGKTTQCMNIME 26 (204)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999997653
No 307
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=41.88 E-value=9.3 Score=30.58 Aligned_cols=12 Identities=25% Similarity=0.354 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.++
T Consensus 179 G~GKSTll~~l~ 190 (301)
T 1u0l_A 179 GVGKSSLLNAIN 190 (301)
T ss_dssp TSSHHHHHHHHS
T ss_pred CCcHHHHHHHhc
Confidence 489999999874
No 308
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=41.85 E-value=10 Score=27.61 Aligned_cols=13 Identities=23% Similarity=0.204 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 22 GsGKsT~a~~L~~ 34 (199)
T 2bwj_A 22 GSGKGTQCEKLVE 34 (199)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987754
No 309
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=41.85 E-value=10 Score=28.98 Aligned_cols=13 Identities=31% Similarity=0.524 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.+.-
T Consensus 12 g~GKtt~~~~l~~ 24 (241)
T 2ocp_A 12 AVGKSTFVKLLTK 24 (241)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987754
No 310
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=41.79 E-value=12 Score=28.50 Aligned_cols=18 Identities=28% Similarity=0.294 Sum_probs=13.0
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
+|||||..+- |++.|++|
T Consensus 19 gsGKStv~~~------l~~~g~~v 36 (210)
T 4i1u_A 19 GSGKTTVADL------FAARGASL 36 (210)
T ss_dssp TSCHHHHHHH------HHHTTCEE
T ss_pred CCCHHHHHHH------HHHCCCcE
Confidence 5899998774 45667664
No 311
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=41.74 E-value=10 Score=30.43 Aligned_cols=13 Identities=38% Similarity=0.383 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||+++.+.-
T Consensus 28 G~GKSTLl~~L~g 40 (301)
T 2qnr_A 28 GLGKSTLINSLFL 40 (301)
T ss_dssp TSSHHHHHHHHHC
T ss_pred CCCHHHHHHHHhC
Confidence 4799999999653
No 312
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=41.33 E-value=11 Score=27.28 Aligned_cols=13 Identities=38% Similarity=0.304 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 12 GsGKsT~a~~La~ 24 (184)
T 2iyv_A 12 GSGKSTIGRRLAK 24 (184)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999988754
No 313
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=41.32 E-value=11 Score=27.64 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=14.9
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
+|||||++..+.- .|.+-|..|
T Consensus 14 GsGKTTl~~~L~~--~l~~~g~~v 35 (169)
T 1xjc_A 14 HSGKTTLMEKWVA--AAVREGWRV 35 (169)
T ss_dssp TSSHHHHHHHHHH--HHHHTTCCE
T ss_pred CCCHHHHHHHHHH--hhHhcCCee
Confidence 4899999987543 455556543
No 314
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=41.30 E-value=11 Score=27.64 Aligned_cols=13 Identities=31% Similarity=0.153 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 18 GsGKST~~~~La~ 30 (203)
T 1uf9_A 18 GSGKSTVAALLRS 30 (203)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987654
No 315
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=41.26 E-value=11 Score=28.54 Aligned_cols=13 Identities=23% Similarity=0.258 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 17 GsGKsT~a~~La~ 29 (227)
T 1zd8_A 17 GSGKGTVSSRITT 29 (227)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987754
No 316
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=41.07 E-value=1.8e+02 Score=25.36 Aligned_cols=44 Identities=14% Similarity=0.199 Sum_probs=31.2
Q ss_pred CHHHHHHHHHcCCCCCHHHH-------HHcCccccccCChh-HHHhHHHHHHHH
Q psy7339 147 GNSVASELLYTGRKLNAQEA-------LQYGFVSGVFTTEE-IERDLWPRIHAW 192 (223)
Q Consensus 147 g~~~a~~l~l~g~~~~a~eA-------~~~Glv~~v~~~~~-l~~~a~~~a~~l 192 (223)
|++..+. .+|+.+++++. ...|++|.++++|+ ..+.++++..-+
T Consensus 215 GP~vI~~--~~ge~v~~E~LGGa~~h~~~sG~~d~v~~~e~~a~~~~r~lls~L 266 (531)
T 3n6r_B 215 GPDVVKT--VTNEQVSAEELGGATTHTRKSSVADAAFENDVEALAEVRRLVDFL 266 (531)
T ss_dssp CHHHHHH--HHCCCCCHHHHHBHHHHHHTTSCCSEEESSHHHHHHHHHHHHTTS
T ss_pred CHHHHHH--HhCCccChhhcchHHHHhhccCcceEEeCCHHHHHHHHHHHHHhc
Confidence 5544443 57899999998 89999999998853 555555555433
No 317
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=41.00 E-value=11 Score=27.40 Aligned_cols=13 Identities=23% Similarity=0.268 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||..+.+.-
T Consensus 19 GsGKsT~~~~La~ 31 (196)
T 2c95_A 19 GSGKGTQCEKIVQ 31 (196)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987754
No 318
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=40.90 E-value=20 Score=27.80 Aligned_cols=18 Identities=28% Similarity=0.189 Sum_probs=13.7
Q ss_pred CCchhHHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMA 18 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~ 18 (223)
.+||||.+-.......-+
T Consensus 29 gsGKTT~lL~~~~r~~~~ 46 (234)
T 2orv_A 29 FSGKSTELMRRVRRFQIA 46 (234)
T ss_dssp TSCHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHHHHC
Confidence 489999888877776544
No 319
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=40.83 E-value=13 Score=30.59 Aligned_cols=16 Identities=19% Similarity=0.314 Sum_probs=13.5
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++||||++..|....+
T Consensus 33 GaGKTTll~ai~~al~ 48 (365)
T 3qf7_A 33 GAGKSSLFEAISFALF 48 (365)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc
Confidence 5899999999887664
No 320
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=40.69 E-value=11 Score=27.72 Aligned_cols=13 Identities=15% Similarity=0.194 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 25 GsGKsT~~~~L~~ 37 (203)
T 1ukz_A 25 GAGKGTQCEKLVK 37 (203)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987753
No 321
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=40.67 E-value=11 Score=30.64 Aligned_cols=14 Identities=21% Similarity=0.102 Sum_probs=11.8
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||++|.++-.
T Consensus 61 G~GKTTLa~~ia~~ 74 (334)
T 1in4_A 61 GLGKTTLAHIIASE 74 (334)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 58999999998754
No 322
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=40.61 E-value=11 Score=27.84 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=14.2
Q ss_pred CCchhHHHHHHHHHHHHHhhCCc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCY 23 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~ 23 (223)
+|||||+.+.+.-. |...|+.
T Consensus 19 GsGKsT~~~~L~~~--l~~~~~~ 39 (215)
T 1nn5_A 19 RAGKSTQSRKLVEA--LCAAGHR 39 (215)
T ss_dssp TSSHHHHHHHHHHH--HHHTTCC
T ss_pred CCCHHHHHHHHHHH--HHHcCCc
Confidence 58999999987643 3334544
No 323
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=40.38 E-value=11 Score=27.14 Aligned_cols=13 Identities=31% Similarity=0.187 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.++-
T Consensus 15 GsGKst~a~~La~ 27 (185)
T 3trf_A 15 GAGKTSVGSQLAK 27 (185)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998764
No 324
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=40.27 E-value=12 Score=30.65 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=12.5
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||++++++...
T Consensus 141 GsGKTTL~~~l~~~~ 155 (349)
T 1pzn_A 141 GSGKTQLAHTLAVMV 155 (349)
T ss_dssp TSSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHh
Confidence 589999999987653
No 325
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=40.23 E-value=12 Score=26.68 Aligned_cols=12 Identities=33% Similarity=0.401 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||..|.+.
T Consensus 17 GsGKSTva~~La 28 (168)
T 1zuh_A 17 GSGKSSLAQELG 28 (168)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999888754
No 326
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=40.14 E-value=11 Score=27.34 Aligned_cols=13 Identities=23% Similarity=0.304 Sum_probs=10.4
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 20 GsGKSTv~~~La~ 32 (184)
T 1y63_A 20 GTGKTSMAEMIAA 32 (184)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987654
No 327
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=40.07 E-value=11 Score=29.22 Aligned_cols=13 Identities=38% Similarity=0.340 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.++-
T Consensus 11 GSGKSTla~~La~ 23 (253)
T 2ze6_A 11 CSGKTDMAIQIAQ 23 (253)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CcCHHHHHHHHHh
Confidence 5899999998854
No 328
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=40.03 E-value=11 Score=27.65 Aligned_cols=13 Identities=23% Similarity=0.169 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 30 GsGKST~a~~La~ 42 (201)
T 2cdn_A 30 GAGKGTQAVKLAE 42 (201)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987754
No 329
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=40.01 E-value=11 Score=28.16 Aligned_cols=13 Identities=15% Similarity=0.110 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 14 GsGKsT~a~~La~ 26 (220)
T 1aky_A 14 GAGKGTQAPNLQE 26 (220)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998754
No 330
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=39.56 E-value=13 Score=31.33 Aligned_cols=17 Identities=24% Similarity=0.251 Sum_probs=13.8
Q ss_pred CCchhHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIM 17 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l 17 (223)
++|||||++++++...+
T Consensus 188 GsGKTTLl~~la~~~~~ 204 (400)
T 3lda_A 188 RTGKSQLCHTLAVTCQI 204 (400)
T ss_dssp TSSHHHHHHHHHHHTTS
T ss_pred CCChHHHHHHHHHHhcc
Confidence 48999999998776554
No 331
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=39.41 E-value=12 Score=27.86 Aligned_cols=13 Identities=23% Similarity=0.143 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 22 GSGKSTva~~L~~ 34 (192)
T 2grj_A 22 GTGKSTVCEILKN 34 (192)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999887654
No 332
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=38.92 E-value=11 Score=33.30 Aligned_cols=12 Identities=33% Similarity=0.254 Sum_probs=10.2
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.+.
T Consensus 379 GsGKSTll~~l~ 390 (582)
T 3b5x_A 379 GSGKSTIANLFT 390 (582)
T ss_pred CCCHHHHHHHHh
Confidence 589999999863
No 333
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=38.81 E-value=45 Score=27.14 Aligned_cols=14 Identities=43% Similarity=0.306 Sum_probs=11.7
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+.|||+++|.++-.
T Consensus 94 GtGKT~la~ala~~ 107 (355)
T 2qp9_X 94 GTGKSYLAKAVATE 107 (355)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 47999999988764
No 334
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=38.61 E-value=34 Score=26.18 Aligned_cols=27 Identities=7% Similarity=-0.186 Sum_probs=15.5
Q ss_pred chHHHHHHHHHHHHHhcCCCeEEEEcC
Q psy7339 52 STFALEMKEIAHIIQFLTPRSLILVDE 78 (223)
Q Consensus 52 s~~~~el~~~~~~l~~~~~~~vvvl~~ 78 (223)
..+..++...+.......+.-++|++.
T Consensus 89 ~~~~~~i~~~~~~~~~~~d~il~V~d~ 115 (247)
T 3lxw_A 89 DPGCEERGHCYLLSAPGPHALLLVTQL 115 (247)
T ss_dssp STTSHHHHHHHHHHTTCCSEEEEEEET
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEEeC
Confidence 445566665554444555566666765
No 335
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=38.54 E-value=12 Score=27.74 Aligned_cols=13 Identities=23% Similarity=0.225 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||..+.+.-
T Consensus 10 GsGKsT~a~~L~~ 22 (216)
T 3fb4_A 10 GAGKGTQAEQIIE 22 (216)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987654
No 336
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=38.53 E-value=11 Score=35.60 Aligned_cols=12 Identities=33% Similarity=0.531 Sum_probs=11.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||++|.|.
T Consensus 471 GsGKSTLLk~La 482 (986)
T 2iw3_A 471 GCGKSTLMRAIA 482 (986)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 589999999997
No 337
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=38.51 E-value=12 Score=29.04 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=15.4
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
+|||||+.+.+.-. |.+.|.++
T Consensus 14 GSGKSTla~~La~~--L~~~g~~~ 35 (260)
T 3a4m_A 14 GVGKSTFSKNLAKI--LSKNNIDV 35 (260)
T ss_dssp TSSHHHHHHHHHHH--HHHTTCCE
T ss_pred CCCHHHHHHHHHHH--HHhCCCEE
Confidence 58999999987653 34556543
No 338
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=38.25 E-value=10 Score=29.35 Aligned_cols=13 Identities=15% Similarity=0.074 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 42 GsGKSTla~~L~~ 54 (253)
T 2p5t_B 42 GAGKTTIHRIKQK 54 (253)
T ss_dssp GGTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4899999998754
No 339
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=38.11 E-value=13 Score=25.61 Aligned_cols=12 Identities=33% Similarity=0.241 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 13 ~~GKssl~~~l~ 24 (166)
T 2ce2_X 13 GVGKSALTIQLI 24 (166)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999988765
No 340
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=37.56 E-value=16 Score=30.19 Aligned_cols=16 Identities=31% Similarity=0.264 Sum_probs=13.4
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++||||++|.+.....
T Consensus 45 G~GKs~~~~~~~~~~~ 60 (392)
T 4ag6_A 45 GAGKSFTAKMLLLREY 60 (392)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5899999999887664
No 341
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=37.55 E-value=14 Score=25.75 Aligned_cols=12 Identities=33% Similarity=0.432 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 15 ~~GKssl~~~l~ 26 (168)
T 1z2a_A 15 AVGKSSMIQRYC 26 (168)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999999865
No 342
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=37.48 E-value=13 Score=27.69 Aligned_cols=13 Identities=15% Similarity=0.230 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||..+.+.-
T Consensus 10 GsGKsT~a~~L~~ 22 (214)
T 1e4v_A 10 VAGKGTQAQFIME 22 (214)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999988764
No 343
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=37.45 E-value=10 Score=33.46 Aligned_cols=11 Identities=36% Similarity=0.329 Sum_probs=9.8
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
+|||||++|.+
T Consensus 379 GsGKSTLl~~l 389 (582)
T 3b60_A 379 GSGKSTIASLI 389 (582)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 58999999986
No 344
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=37.38 E-value=10 Score=33.57 Aligned_cols=12 Identities=33% Similarity=0.321 Sum_probs=10.1
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.+.
T Consensus 380 GsGKSTLl~~l~ 391 (595)
T 2yl4_A 380 GSGKSTVLSLLL 391 (595)
T ss_dssp TSSSTHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 589999999763
No 345
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=37.20 E-value=14 Score=26.50 Aligned_cols=12 Identities=25% Similarity=0.338 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 17 gvGKStL~~~l~ 28 (188)
T 2wjg_A 17 NVGKSTIFNALT 28 (188)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 479999999874
No 346
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=37.19 E-value=86 Score=24.00 Aligned_cols=14 Identities=29% Similarity=0.299 Sum_probs=11.9
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+.|||++++.++-.
T Consensus 74 GtGKT~la~~ia~~ 87 (272)
T 1d2n_A 74 HSGKTALAAKIAEE 87 (272)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 57999999998764
No 347
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=37.13 E-value=6.6 Score=32.75 Aligned_cols=15 Identities=33% Similarity=0.536 Sum_probs=11.9
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.|....
T Consensus 70 GaGKStLl~aI~~l~ 84 (415)
T 4aby_A 70 GAGKSIIVDALGLLL 84 (415)
T ss_dssp HHHHHHHTHHHHHHT
T ss_pred CCCHHHHHHHHHHHh
Confidence 379999999986643
No 348
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=37.11 E-value=13 Score=29.48 Aligned_cols=13 Identities=23% Similarity=0.117 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 43 GsGKSTla~~L~~ 55 (287)
T 1gvn_B 43 GSGKTSLRSAIFE 55 (287)
T ss_dssp TSCTHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998753
No 349
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=36.93 E-value=14 Score=27.14 Aligned_cols=13 Identities=46% Similarity=0.498 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 12 GsGKst~~~~la~ 24 (208)
T 3ake_A 12 ASGKSSVARRVAA 24 (208)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998754
No 350
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=36.66 E-value=69 Score=26.99 Aligned_cols=78 Identities=18% Similarity=0.020 Sum_probs=40.5
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcc-------------eeccccce-eeeccccccc-ccccchHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLA-------------EFRLADHI-YTRIGFNDSI-ECNASTFALEMKEIAHII 65 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~-------------~~~~~d~I-~~~~~~~~~~-~~~~s~~~~el~~~~~~l 65 (223)
++|||++.+.++... -+-.+.+++. +..-.+++ +-.+...+.. .-....|.++..++++.+
T Consensus 12 gsGKttla~~La~~~----~~~iis~Ds~QvYr~l~i~T~kp~~~E~~gv~hhlid~~~~~~~~s~~~F~~~a~~~i~~i 87 (409)
T 3eph_A 12 GVGKSQLSIQLAQKF----NGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIEDI 87 (409)
T ss_dssp SSSHHHHHHHHHHHH----TEEEEECCTTTTBSSCTTTTTCCCGGGTTTCCEESCSCBCTTSCCCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHC----CCeEeecCccceecccccccCCCCHHHHcCchhhcCCccChHhHhhHHHHHHHHHHHHHHH
Confidence 489999988776543 1223444432 22223344 2222222221 223467777777777777
Q ss_pred HhcCCCeEEEEcCCCCCc
Q psy7339 66 QFLTPRSLILVDELCRAG 83 (223)
Q Consensus 66 ~~~~~~~vvvl~~~g~~F 83 (223)
.+. ....|+.-|.|-++
T Consensus 88 ~~~-g~~pilVGGTglYi 104 (409)
T 3eph_A 88 HRR-GKIPIVVGGTHYYL 104 (409)
T ss_dssp HTT-TCEEEEECSCGGGG
T ss_pred Hhc-CCCEEEECChHHHH
Confidence 643 34555566666443
No 351
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=36.60 E-value=40 Score=27.66 Aligned_cols=72 Identities=15% Similarity=-0.005 Sum_probs=37.6
Q ss_pred CCchhHHHHHHHHHHHHHhhC-CcccCCcce-------------eccccce-eeecccccc--cccccchHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMAQVG-CYVPASLAE-------------FRLADHI-YTRIGFNDS--IECNASTFALEMKEIAH 63 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g-~~vpa~~~~-------------~~~~d~I-~~~~~~~~~--~~~~~s~~~~el~~~~~ 63 (223)
.+|||++.+.++-. .+ -+|.+|+.. ..-.+++ +-.+...+. ..-+...|.+...++++
T Consensus 50 gsGKTtLa~~LA~~-----l~~eiIs~Ds~qvYr~mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F~~~a~~~i~ 124 (339)
T 3a8t_A 50 GTGKSRLSIDLAAH-----FPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSLAGKAVS 124 (339)
T ss_dssp TSSHHHHHHHHHTT-----SCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-----CCCcEEcccccccccceeeecCCCCHHHHcCCCEeeccccCcccCccCHHHHHHHHHHHHH
Confidence 48999988776542 23 233444442 3333344 222222222 23345677777777777
Q ss_pred HHHhcCCCeEEEEcCC
Q psy7339 64 IIQFLTPRSLILVDEL 79 (223)
Q Consensus 64 ~l~~~~~~~vvvl~~~ 79 (223)
.+... -+.+|+.|.
T Consensus 125 ~i~~~--g~~pIlvGG 138 (339)
T 3a8t_A 125 EITGR--RKLPVLVGG 138 (339)
T ss_dssp HHHHT--TCEEEEECC
T ss_pred HHHhc--CCeEEEEcC
Confidence 76543 345555543
No 352
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=36.52 E-value=14 Score=27.34 Aligned_cols=28 Identities=25% Similarity=0.236 Sum_probs=23.2
Q ss_pred ceeeccccccccCCCCccccchhhhcCH
Q psy7339 121 ATFHTPFTLRGMTPEGCSSVLFPRIFGN 148 (223)
Q Consensus 121 a~f~~pe~~~Gl~p~~g~~~~l~~~vg~ 148 (223)
..+--+|+-.|++|......++....|+
T Consensus 129 ~vlVsNEVG~GiVP~~~~~R~frD~~G~ 156 (180)
T 1c9k_A 129 VVLVTNEVGMGIVPENRLARHFRDIAGR 156 (180)
T ss_dssp EEEECCCCCSSCCCSSHHHHHHHHHHHH
T ss_pred EEEEEccccCCCCCCCHHHHHHHHHHHH
Confidence 3456689999999999888888888886
No 353
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=36.52 E-value=14 Score=27.48 Aligned_cols=12 Identities=17% Similarity=0.210 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||..+.+.
T Consensus 10 GsGKsT~a~~L~ 21 (216)
T 3dl0_A 10 GAGKGTQGERIV 21 (216)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999998764
No 354
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=36.19 E-value=14 Score=27.65 Aligned_cols=13 Identities=23% Similarity=0.256 Sum_probs=10.8
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||..+.+.-
T Consensus 15 GsGKsT~~~~La~ 27 (222)
T 1zak_A 15 ASGKGTQCELIKT 27 (222)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998754
No 355
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=35.99 E-value=14 Score=27.82 Aligned_cols=13 Identities=31% Similarity=0.026 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||..+.+.-
T Consensus 10 GsGKsT~a~~La~ 22 (223)
T 2xb4_A 10 GSGKGTQGNLVKD 22 (223)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998764
No 356
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=35.89 E-value=74 Score=27.32 Aligned_cols=13 Identities=31% Similarity=0.365 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++|||+++|.|+-
T Consensus 59 GtGKT~Laraia~ 71 (476)
T 2ce7_A 59 GTGKTLLARAVAG 71 (476)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4799999999875
No 357
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=35.85 E-value=14 Score=30.82 Aligned_cols=13 Identities=23% Similarity=0.179 Sum_probs=11.3
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||++|.++-
T Consensus 179 GsGKSTl~~~l~~ 191 (377)
T 1svm_A 179 DSGKTTLAAALLE 191 (377)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 5899999998874
No 358
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=35.75 E-value=14 Score=30.59 Aligned_cols=12 Identities=25% Similarity=0.293 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 225 G~GKSTLln~L~ 236 (358)
T 2rcn_A 225 GVGKSSLLNALL 236 (358)
T ss_dssp TSSHHHHHHHHH
T ss_pred CccHHHHHHHHh
Confidence 479999998775
No 359
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=35.37 E-value=19 Score=29.26 Aligned_cols=16 Identities=25% Similarity=0.206 Sum_probs=13.1
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++||||++..|....+
T Consensus 33 GsGKS~lleAi~~~l~ 48 (339)
T 3qkt_A 33 GSGKSSLLDAILVGLY 48 (339)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhc
Confidence 5899999999976554
No 360
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=35.12 E-value=16 Score=25.31 Aligned_cols=12 Identities=33% Similarity=0.196 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 14 ~~GKssl~~~l~ 25 (168)
T 1u8z_A 14 GVGKSALTLQFM 25 (168)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998865
No 361
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=35.08 E-value=15 Score=28.64 Aligned_cols=13 Identities=38% Similarity=0.194 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||+.|.++-
T Consensus 58 GsGKSTl~~~La~ 70 (250)
T 3nwj_A 58 GSGKTTVGKIMAR 70 (250)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998764
No 362
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=35.07 E-value=12 Score=33.17 Aligned_cols=12 Identities=25% Similarity=0.354 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.+.
T Consensus 391 GsGKSTll~~l~ 402 (598)
T 3qf4_B 391 GSGKTTIVNLLM 402 (598)
T ss_dssp TSSTTHHHHHHT
T ss_pred CCcHHHHHHHHh
Confidence 589999999763
No 363
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=34.92 E-value=15 Score=28.25 Aligned_cols=12 Identities=33% Similarity=0.407 Sum_probs=9.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||+.+.+.
T Consensus 32 GSGKST~a~~L~ 43 (252)
T 1uj2_A 32 ASGKSSVCAKIV 43 (252)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999988553
No 364
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=34.77 E-value=15 Score=27.43 Aligned_cols=14 Identities=21% Similarity=0.062 Sum_probs=11.2
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||..+.++-.
T Consensus 15 GsGKsT~a~~La~~ 28 (217)
T 3be4_A 15 GSGKGTQCEFIKKE 28 (217)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999887643
No 365
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=34.71 E-value=35 Score=28.08 Aligned_cols=13 Identities=23% Similarity=0.266 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+||||+++.+.-
T Consensus 189 naGKSTLln~L~~ 201 (364)
T 2qtf_A 189 NSGKTSLFNSLTG 201 (364)
T ss_dssp TSSHHHHHHHHHC
T ss_pred CCCHHHHHHHHHC
Confidence 3799999998753
No 366
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=34.60 E-value=15 Score=28.89 Aligned_cols=13 Identities=31% Similarity=0.424 Sum_probs=11.0
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 12 GsGKST~a~~L~~ 24 (301)
T 1ltq_A 12 GSGKSTWAREFIA 24 (301)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998765
No 367
>1chd_A CHEB methylesterase; chemotaxis protein, serine hydrolase, carboxyl methylesteras; 1.75A {Salmonella typhimurium} SCOP: c.40.1.1
Probab=34.52 E-value=20 Score=27.19 Aligned_cols=27 Identities=26% Similarity=0.448 Sum_probs=21.5
Q ss_pred HHHHHHcCccccccCChhHHHhHHHHH
Q psy7339 163 AQEALQYGFVSGVFTTEEIERDLWPRI 189 (223)
Q Consensus 163 a~eA~~~Glv~~v~~~~~l~~~a~~~a 189 (223)
++.|.+.|.+|+++|.+++-++..+++
T Consensus 169 P~~Ai~~G~vd~vlpl~~ia~~l~~~~ 195 (203)
T 1chd_A 169 PREAINMGGVSEVVDLSQVSQQMLAKI 195 (203)
T ss_dssp HHHHHHTTCCSEEECGGGHHHHHHHHH
T ss_pred HHHHHhcCCccEEeCHHHHHHHHHHHH
Confidence 468899999999999998776655443
No 368
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=34.44 E-value=20 Score=29.66 Aligned_cols=15 Identities=20% Similarity=0.215 Sum_probs=12.7
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.|....
T Consensus 36 G~GKttll~ai~~~~ 50 (359)
T 2o5v_A 36 GAGKTNLLEAAYLAL 50 (359)
T ss_dssp TSSHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHhc
Confidence 589999999998654
No 369
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=34.33 E-value=26 Score=28.62 Aligned_cols=75 Identities=16% Similarity=0.060 Sum_probs=38.4
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCccee-------------ccccce-eeeccccccc-ccccchHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEF-------------RLADHI-YTRIGFNDSI-ECNASTFALEMKEIAHII 65 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~-------------~~~d~I-~~~~~~~~~~-~~~~s~~~~el~~~~~~l 65 (223)
.+|||++.+.++... -+-.+.+++..+ .-.+++ +-.++..+.. .-....|..+..+.++.+
T Consensus 13 gsGKt~la~~La~~~----~~~iis~Ds~QvYr~~~igTakp~~~E~~gvphhlid~~~~~e~~s~~~F~~~a~~~i~~i 88 (322)
T 3exa_A 13 AVGKTKTSVMLAKRL----NGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQDLATPLITEI 88 (322)
T ss_dssp TSCHHHHHHHHHHTT----TEEEEECCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhC----ccceeecCcccceeeeeecCCCCCHHHHcCCCEEEeccCChhhhccHHHHHHHHHHHHHHH
Confidence 489999988876432 122334443322 222333 1111111111 223467888888888777
Q ss_pred HhcCCCeEEEEcCCC
Q psy7339 66 QFLTPRSLILVDELC 80 (223)
Q Consensus 66 ~~~~~~~vvvl~~~g 80 (223)
.+. ....|+.-|.|
T Consensus 89 ~~~-gk~pIlVGGTg 102 (322)
T 3exa_A 89 HER-GRLPFLVGGTG 102 (322)
T ss_dssp HHT-TCEEEEESCCH
T ss_pred HhC-CCcEEEEcCcH
Confidence 654 33455555665
No 370
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=33.80 E-value=8.2 Score=28.41 Aligned_cols=12 Identities=25% Similarity=0.382 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 36 g~GKSTLl~~l~ 47 (210)
T 1pui_A 36 NAGKSSALNTLT 47 (210)
T ss_dssp TSSHHHHHTTTC
T ss_pred CCCHHHHHHHHh
Confidence 479999999864
No 371
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=33.79 E-value=54 Score=27.93 Aligned_cols=22 Identities=27% Similarity=0.333 Sum_probs=15.3
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
++||||++..++. +|.+-|.-|
T Consensus 110 G~GKTTt~~kLA~--~l~~~G~kV 131 (443)
T 3dm5_A 110 GSGKTTTVAKLAR--YFQKRGYKV 131 (443)
T ss_dssp TSSHHHHHHHHHH--HHHTTTCCE
T ss_pred CCCHHHHHHHHHH--HHHHCCCeE
Confidence 5899999987764 455666443
No 372
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=33.76 E-value=17 Score=29.29 Aligned_cols=14 Identities=36% Similarity=0.380 Sum_probs=11.9
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++||||+++.|...
T Consensus 34 GsGKS~ll~ai~~l 47 (322)
T 1e69_A 34 GSGKSNIIDAIKWV 47 (322)
T ss_dssp TTCSTHHHHHHHHT
T ss_pred CCcHHHHHHHHHHH
Confidence 58999999997764
No 373
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=33.76 E-value=13 Score=31.49 Aligned_cols=12 Identities=33% Similarity=0.304 Sum_probs=10.3
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||+++.+.
T Consensus 41 GaGKSTLln~L~ 52 (418)
T 2qag_C 41 GLGKSTLINSLF 52 (418)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCcHHHHHHHHh
Confidence 479999999875
No 374
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=33.36 E-value=17 Score=27.94 Aligned_cols=14 Identities=29% Similarity=0.278 Sum_probs=11.6
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
++|||+++|.++-.
T Consensus 55 GtGKT~la~~la~~ 68 (257)
T 1lv7_A 55 GTGKTLLAKAIAGE 68 (257)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999998753
No 375
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=33.16 E-value=17 Score=25.20 Aligned_cols=12 Identities=25% Similarity=0.257 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 13 ~~GKssli~~l~ 24 (172)
T 2erx_A 13 GVGKSSLVLRFV 24 (172)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998764
No 376
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=33.10 E-value=18 Score=25.09 Aligned_cols=12 Identities=33% Similarity=0.230 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 13 ~~GKssli~~l~ 24 (167)
T 1c1y_A 13 GVGKSALTVQFV 24 (167)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998875
No 377
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=33.02 E-value=17 Score=26.08 Aligned_cols=13 Identities=23% Similarity=0.327 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+||||++..+.-
T Consensus 58 g~GKSsll~~l~~ 70 (193)
T 2ged_A 58 NSGKTSLLTLLTT 70 (193)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHhc
Confidence 4799999988754
No 378
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=32.96 E-value=17 Score=28.04 Aligned_cols=13 Identities=31% Similarity=0.253 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.++-
T Consensus 19 GsGKsTla~~la~ 31 (233)
T 3r20_A 19 GTGKSSVSRGLAR 31 (233)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999998754
No 379
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=32.87 E-value=17 Score=26.55 Aligned_cols=15 Identities=20% Similarity=0.135 Sum_probs=12.0
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++|||++++.++-..
T Consensus 64 GtGKT~la~~i~~~~ 78 (202)
T 2w58_A 64 GVGKTYLLAAIANEL 78 (202)
T ss_dssp TSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 579999999887544
No 380
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=32.83 E-value=18 Score=25.14 Aligned_cols=12 Identities=25% Similarity=0.183 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 16 ~~GKSsli~~l~ 27 (170)
T 1z0j_A 16 GVGKSSIMWRFV 27 (170)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999999864
No 381
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=32.64 E-value=17 Score=27.47 Aligned_cols=14 Identities=21% Similarity=0.128 Sum_probs=11.4
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||..+.++-.
T Consensus 26 GsGKsT~a~~La~~ 39 (233)
T 1ak2_A 26 GAGKGTQAPKLAKN 39 (233)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999987654
No 382
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=32.31 E-value=18 Score=26.96 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=12.7
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++|||++++.++-...
T Consensus 62 G~GKT~la~~l~~~~~ 77 (242)
T 3bos_A 62 KSGRTHLIHAACARAN 77 (242)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5899999998876543
No 383
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=32.27 E-value=18 Score=25.42 Aligned_cols=12 Identities=17% Similarity=0.263 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 18 ~~GKSsli~~l~ 29 (182)
T 1ky3_A 18 GVGKTSLMHRYV 29 (182)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998765
No 384
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=32.25 E-value=2.5e+02 Score=24.38 Aligned_cols=44 Identities=23% Similarity=0.134 Sum_probs=28.9
Q ss_pred CHHHHHHHHHcCCCCCHH-----HHH--HcCccccccCCh-hHHHhHHHHHHHH
Q psy7339 147 GNSVASELLYTGRKLNAQ-----EAL--QYGFVSGVFTTE-EIERDLWPRIHAW 192 (223)
Q Consensus 147 g~~~a~~l~l~g~~~~a~-----eA~--~~Glv~~v~~~~-~l~~~a~~~a~~l 192 (223)
|++..+. .+|+.++.+ |.+ +.|++|.+++++ ++.+.++++..-+
T Consensus 204 GP~vI~~--~~ge~~~~e~lggae~h~~~~G~vd~vv~d~~~~~~~~r~lL~~l 255 (523)
T 1on3_A 204 GPQVIKS--VTGEDVTADELGGAEAHMAISGNIHFVAEDDDAAELIAKKLLSFL 255 (523)
T ss_dssp CHHHHHH--HHCCCCCHHHHHSHHHHHHTTCCCSEEESSHHHHHHHHHHHHHTS
T ss_pred CHHHHHH--HhCCcCChHhcccHHHHhhccCceEEEeCCHHHHHHHHHHHHHhc
Confidence 5554443 468888864 333 689999999964 4666666665544
No 385
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=32.19 E-value=18 Score=28.58 Aligned_cols=12 Identities=33% Similarity=0.340 Sum_probs=10.4
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||+.+.+.
T Consensus 85 GSGKSTva~~La 96 (281)
T 2f6r_A 85 GSGKSSVAQRLK 96 (281)
T ss_dssp TSCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999999876
No 386
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=32.06 E-value=26 Score=30.55 Aligned_cols=15 Identities=27% Similarity=0.182 Sum_probs=12.5
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||++|.|+-..
T Consensus 118 GtGKTtlar~ia~~l 132 (543)
T 3m6a_A 118 GVGKTSLAKSIAKSL 132 (543)
T ss_dssp SSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhc
Confidence 579999999987654
No 387
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=32.03 E-value=18 Score=27.10 Aligned_cols=13 Identities=38% Similarity=0.378 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||.++.+.-
T Consensus 12 GsGKsTq~~~L~~ 24 (205)
T 4hlc_A 12 GSGKTTVINEVYH 24 (205)
T ss_dssp TSCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 5899999987654
No 388
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=31.99 E-value=1.6e+02 Score=27.22 Aligned_cols=63 Identities=17% Similarity=0.218 Sum_probs=35.8
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
+.|||++.|.|+- ..|++ +..++.++-.+......-..+.++++..... ...+|+|++..
T Consensus 248 GTGKT~LAraiA~-----elg~~--------------~~~v~~~~l~sk~~gese~~lr~lF~~A~~~-~PsIIfIDEiD 307 (806)
T 3cf2_A 248 GTGKTLIARAVAN-----ETGAF--------------FFLINGPEIMSKLAGESESNLRKAFEEAEKN-APAIIFIDELD 307 (806)
T ss_dssp TSCHHHHHHHHHT-----TTTCE--------------EEEEEHHHHHSSCTTHHHHHHHHHHHHHTTS-CSEEEEEESGG
T ss_pred CCCHHHHHHHHHH-----HhCCe--------------EEEEEhHHhhcccchHHHHHHHHHHHHHHHc-CCeEEEEehhc
Confidence 4799999998763 33432 1122222323333344445566777766543 35788889876
Q ss_pred CCc
Q psy7339 81 RAG 83 (223)
Q Consensus 81 ~~F 83 (223)
.-+
T Consensus 308 al~ 310 (806)
T 3cf2_A 308 AIA 310 (806)
T ss_dssp GTC
T ss_pred ccc
Confidence 443
No 389
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=31.99 E-value=20 Score=30.16 Aligned_cols=15 Identities=27% Similarity=0.390 Sum_probs=12.8
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||++++|....
T Consensus 36 G~GKstll~ai~~~~ 50 (430)
T 1w1w_A 36 GSGKSNMMDAISFVL 50 (430)
T ss_dssp TSSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhhh
Confidence 589999999998755
No 390
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=31.95 E-value=19 Score=25.32 Aligned_cols=12 Identities=25% Similarity=0.338 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 13 gvGKStL~~~l~ 24 (165)
T 2wji_A 13 NVGKSTIFNALT 24 (165)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999999874
No 391
>3sft_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; modified doubly-wound/fold, chemoreceptor; 2.15A {Thermotoga maritima}
Probab=31.92 E-value=29 Score=26.04 Aligned_cols=25 Identities=16% Similarity=0.307 Sum_probs=19.8
Q ss_pred HHHHHHcCccccccCChhHHHhHHH
Q psy7339 163 AQEALQYGFVSGVFTTEEIERDLWP 187 (223)
Q Consensus 163 a~eA~~~Glv~~v~~~~~l~~~a~~ 187 (223)
++.|.+.|.+|+|+|.+++-++..+
T Consensus 167 P~aAi~~g~vd~vlp~~~ia~~l~~ 191 (193)
T 3sft_A 167 PKSVIEEGYADYVLPAYKIPEKLIE 191 (193)
T ss_dssp HHHHHHTTCCSEEECGGGHHHHHHH
T ss_pred HHHHHHcCCCcEEecHHHHHHHHHH
Confidence 4678899999999999987655443
No 392
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=31.91 E-value=18 Score=21.26 Aligned_cols=12 Identities=17% Similarity=0.282 Sum_probs=9.7
Q ss_pred hhHHHHHHHHHH
Q psy7339 4 KSVYIKQVALLQ 15 (223)
Q Consensus 4 ks~~~~~i~~~~ 15 (223)
||.|||.||=++
T Consensus 28 ~SNFLRvIGKnL 39 (57)
T 3fxd_A 28 KSNFLRVIGKKL 39 (57)
T ss_dssp SCHHHHHHHHHH
T ss_pred HHHHHHHHHHhH
Confidence 788999988664
No 393
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=31.77 E-value=19 Score=24.94 Aligned_cols=12 Identities=25% Similarity=0.315 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 13 ~~GKssli~~l~ 24 (170)
T 1ek0_A 13 AVGKSSIVLRFV 24 (170)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998864
No 394
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=31.71 E-value=19 Score=25.80 Aligned_cols=13 Identities=31% Similarity=0.181 Sum_probs=10.4
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+||||++..+.-
T Consensus 31 ~~GKSsli~~l~~ 43 (190)
T 3con_A 31 GVGKSALTIQLIQ 43 (190)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHc
Confidence 3799999988753
No 395
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=31.66 E-value=18 Score=24.90 Aligned_cols=12 Identities=33% Similarity=0.230 Sum_probs=9.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 13 ~~GKSsli~~l~ 24 (167)
T 1kao_A 13 GVGKSALTVQFV 24 (167)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999987765
No 396
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=31.62 E-value=19 Score=25.02 Aligned_cols=12 Identities=17% Similarity=0.288 Sum_probs=9.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 16 ~~GKssli~~l~ 27 (170)
T 1z08_A 16 CVGKTSLVLRYC 27 (170)
T ss_dssp TSCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998764
No 397
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=31.52 E-value=18 Score=26.00 Aligned_cols=12 Identities=33% Similarity=0.504 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 12 gvGKStLl~~l~ 23 (184)
T 2zej_A 12 GSGKTTLLQQLM 23 (184)
T ss_dssp TSSHHHHHHHHT
T ss_pred CCCHHHHHHHHh
Confidence 479999999865
No 398
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=31.51 E-value=19 Score=25.86 Aligned_cols=14 Identities=29% Similarity=0.328 Sum_probs=11.1
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
.+||||+++.+.-.
T Consensus 33 ~~GKSsli~~l~~~ 46 (195)
T 1svi_A 33 NVGKSSFINSLINR 46 (195)
T ss_dssp TSSHHHHHHHHHTC
T ss_pred CCCHHHHHHHHhCC
Confidence 37999999988643
No 399
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=31.51 E-value=19 Score=27.01 Aligned_cols=25 Identities=8% Similarity=0.101 Sum_probs=16.8
Q ss_pred cCccccccCChhHHHhHHHHHHHHh
Q psy7339 169 YGFVSGVFTTEEIERDLWPRIHAWA 193 (223)
Q Consensus 169 ~Glv~~v~~~~~l~~~a~~~a~~l~ 193 (223)
.+..|.++-.++++++..++..-+.
T Consensus 164 ~~~fd~vivNd~l~~a~~~l~~ii~ 188 (197)
T 3ney_A 164 AHYFDLSLVNNGVDETLKKLQEAFD 188 (197)
T ss_dssp GGGCSEEEEESCHHHHHHHHHHHHH
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHH
Confidence 4677888766777777666665553
No 400
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=31.40 E-value=23 Score=28.32 Aligned_cols=29 Identities=10% Similarity=0.319 Sum_probs=17.8
Q ss_pred CCchhHHHHHHHHHHHHHhhC---CcccCCcce
Q psy7339 1 MSGKSVYIKQVALLQIMAQVG---CYVPASLAE 30 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g---~~vpa~~~~ 30 (223)
++||||+++.++...-. ..| +++.++..+
T Consensus 115 GsGKTTl~~~LA~~l~~-~~G~~V~lv~~D~~r 146 (296)
T 2px0_A 115 GAGKTTTLAKLAAISML-EKHKKIAFITTDTYR 146 (296)
T ss_dssp TSSHHHHHHHHHHHHHH-TTCCCEEEEECCCSS
T ss_pred CCCHHHHHHHHHHHHHH-hcCCEEEEEecCccc
Confidence 58999999988754321 256 334455433
No 401
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=31.34 E-value=19 Score=25.57 Aligned_cols=12 Identities=33% Similarity=0.487 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 14 g~GKStLl~~l~ 25 (172)
T 2gj8_A 14 NAGKSSLLNALA 25 (172)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998864
No 402
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=31.24 E-value=19 Score=27.29 Aligned_cols=13 Identities=46% Similarity=0.401 Sum_probs=10.2
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+.-
T Consensus 26 gsGKst~~~~l~~ 38 (236)
T 1q3t_A 26 SSGKSTVAKIIAK 38 (236)
T ss_dssp CSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999986643
No 403
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=31.24 E-value=20 Score=25.24 Aligned_cols=13 Identities=31% Similarity=0.138 Sum_probs=10.3
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+|||++++.+.-
T Consensus 19 ~~GKssli~~l~~ 31 (181)
T 2fn4_A 19 GVGKSALTIQFIQ 31 (181)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 3799999988653
No 404
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=31.17 E-value=19 Score=25.29 Aligned_cols=12 Identities=33% Similarity=0.418 Sum_probs=9.9
Q ss_pred CchhHHHHHHHH
Q psy7339 2 SGKSVYIKQVAL 13 (223)
Q Consensus 2 ~gks~~~~~i~~ 13 (223)
+|||++++.+.-
T Consensus 26 ~GKSsli~~l~~ 37 (179)
T 1z0f_A 26 VGKSCLLHQFTE 37 (179)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHc
Confidence 799999988653
No 405
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=31.12 E-value=1.4e+02 Score=25.12 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=35.6
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
+.|||++.|+|+- +.|+++ ..+..++-.+...+..-..+.++++..... ...++.+++..
T Consensus 216 GtGKT~lakAiA~-----~~~~~~--------------~~v~~~~l~~~~~Ge~e~~ir~lF~~A~~~-aP~IifiDEiD 275 (428)
T 4b4t_K 216 GTGKTMLVKAVAN-----STKAAF--------------IRVNGSEFVHKYLGEGPRMVRDVFRLAREN-APSIIFIDEVD 275 (428)
T ss_dssp TTTHHHHHHHHHH-----HHTCEE--------------EEEEGGGTCCSSCSHHHHHHHHHHHHHHHT-CSEEEEEECTH
T ss_pred CCCHHHHHHHHHH-----HhCCCe--------------EEEecchhhccccchhHHHHHHHHHHHHHc-CCCeeechhhh
Confidence 5799999999874 334321 122222323333444555677777776654 34788888765
Q ss_pred C
Q psy7339 81 R 81 (223)
Q Consensus 81 ~ 81 (223)
.
T Consensus 276 ~ 276 (428)
T 4b4t_K 276 S 276 (428)
T ss_dssp H
T ss_pred h
Confidence 3
No 406
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=31.10 E-value=19 Score=27.42 Aligned_cols=14 Identities=36% Similarity=0.299 Sum_probs=11.4
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||.++.+.-.
T Consensus 36 GsGKsT~~~~l~~~ 49 (229)
T 4eaq_A 36 GSGKTTVINEVYHR 49 (229)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 58999999988653
No 407
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=31.05 E-value=20 Score=25.19 Aligned_cols=12 Identities=25% Similarity=0.288 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 17 ~~GKSsli~~l~ 28 (177)
T 1wms_A 17 GVGKSSLMNRYV 28 (177)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998874
No 408
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=30.93 E-value=20 Score=24.86 Aligned_cols=12 Identities=25% Similarity=0.288 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 13 ~~GKssli~~l~ 24 (170)
T 1g16_A 13 GVGKSCLLVRFV 24 (170)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998875
No 409
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=30.92 E-value=2.1e+02 Score=29.00 Aligned_cols=73 Identities=18% Similarity=0.135 Sum_probs=39.4
Q ss_pred CCchhHHHHHHHHHHHHHh-hCCcccCCcce---------eccccceeeecccccccccccchHHHHHHHHHHHHHhcCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQ-VGCYVPASLAE---------FRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTP 70 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~-~g~~vpa~~~~---------~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~ 70 (223)
.+|||||+-+++....... -.+|+..+... +. .+.++. .. .+-.+++.+.++.+-....
T Consensus 393 GsGKTtLaLq~a~~~~~~G~~vlyis~E~s~~~~~a~~lGvd-~~~L~i--~~--------~~~~e~~l~~l~~lv~~~~ 461 (1706)
T 3cmw_A 393 SSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVD-IDNLLC--SQ--------PDTGEQALEICDALARSGA 461 (1706)
T ss_dssp TSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHHHHHHTTCC-GGGCEE--EC--------CSSHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHcCCC-HHHeEE--cC--------CCCHHHHHHHHHHHHHhcC
Confidence 4799999999987765321 12333333211 11 122221 11 1113455555555545567
Q ss_pred CeEEEEcCCCCCcC
Q psy7339 71 RSLILVDELCRAGI 84 (223)
Q Consensus 71 ~~vvvl~~~g~~F~ 84 (223)
..+||+|+...-+.
T Consensus 462 ~~lVVIDSL~al~~ 475 (1706)
T 3cmw_A 462 VDVIVVDSVAALTP 475 (1706)
T ss_dssp CSEEEESCSTTCCC
T ss_pred CCEEEECCHHHhhc
Confidence 89999999876553
No 410
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=30.82 E-value=31 Score=25.89 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=14.9
Q ss_pred CCchhHHHHHHHHHHHHHh
Q psy7339 1 MSGKSVYIKQVALLQIMAQ 19 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~ 19 (223)
.+|||+|+-+++......+
T Consensus 40 G~GKT~l~l~~~~~~~~~~ 58 (251)
T 2zts_A 40 GTGKTTFAAQFIYKGAEEY 58 (251)
T ss_dssp TSSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhc
Confidence 4799999999987765543
No 411
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=30.71 E-value=24 Score=28.44 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=14.4
Q ss_pred CCchhHHHHHHHHHHHHHhhCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGC 22 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~ 22 (223)
++||||+++.++-. +++.|.
T Consensus 114 GsGKTTl~~~LA~~--l~~~g~ 133 (306)
T 1vma_A 114 GTGKTTSCGKLAKM--FVDEGK 133 (306)
T ss_dssp TSSHHHHHHHHHHH--HHHTTC
T ss_pred CChHHHHHHHHHHH--HHhcCC
Confidence 58999999988754 345453
No 412
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=30.60 E-value=59 Score=29.92 Aligned_cols=62 Identities=18% Similarity=0.194 Sum_probs=34.1
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
++||||++|.++-. .+.+ +..++..+-.......+...+..++...... ...++++++..
T Consensus 248 GtGKTtLarala~~-----l~~~--------------~i~v~~~~l~~~~~g~~~~~l~~vf~~a~~~-~p~il~iDEid 307 (806)
T 1ypw_A 248 GTGKTLIARAVANE-----TGAF--------------FFLINGPEIMSKLAGESESNLRKAFEEAEKN-APAIIFIDELD 307 (806)
T ss_dssp TSSHHHHHHHHHHT-----TTCE--------------EEEEEHHHHSSSSTTHHHHHHHHHHHHHHHH-CSEEEEEESGG
T ss_pred CCCHHHHHHHHHHH-----cCCc--------------EEEEEchHhhhhhhhhHHHHHHHHHHHHHhc-CCcEEEeccHH
Confidence 58999999998532 2211 1112222222222344555566677666544 35788889875
Q ss_pred CC
Q psy7339 81 RA 82 (223)
Q Consensus 81 ~~ 82 (223)
..
T Consensus 308 ~l 309 (806)
T 1ypw_A 308 AI 309 (806)
T ss_dssp GT
T ss_pred Hh
Confidence 43
No 413
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=30.51 E-value=15 Score=29.26 Aligned_cols=13 Identities=15% Similarity=0.056 Sum_probs=8.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+.+.+..
T Consensus 15 GSGKSTva~~L~~ 27 (290)
T 1a7j_A 15 GAGTSTVKHTFDQ 27 (290)
T ss_dssp ---CCTHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4899999998764
No 414
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=30.32 E-value=2.8e+02 Score=24.33 Aligned_cols=37 Identities=14% Similarity=0.043 Sum_probs=26.9
Q ss_pred HcCCCCCHHHH-------HHcCccccccCChh-HHHhHHHHHHHH
Q psy7339 156 YTGRKLNAQEA-------LQYGFVSGVFTTEE-IERDLWPRIHAW 192 (223)
Q Consensus 156 l~g~~~~a~eA-------~~~Glv~~v~~~~~-l~~~a~~~a~~l 192 (223)
.+|+.+++++. ...|++|.++++|+ ..+.++++..-+
T Consensus 242 ~~ge~~~~e~LGGa~~h~~~sGv~d~v~~de~~a~~~~r~~ls~L 286 (555)
T 3u9r_B 242 ATGEVVSAEELGGADVHCKVSGVADHYAEDDDHALAIARRCVANL 286 (555)
T ss_dssp HHCCCCCHHHHHBHHHHHHTTCSCSEEESSHHHHHHHHHHHHHTS
T ss_pred HhcCccChhhccchhhhhhccCceeEEeCCHHHHHHHHHHHHHhC
Confidence 57899999988 78999999998764 334444444433
No 415
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=30.18 E-value=21 Score=26.57 Aligned_cols=22 Identities=41% Similarity=0.403 Sum_probs=16.4
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
+|||||.++.+. ..|.+-|..|
T Consensus 10 GsGKsTq~~~L~--~~L~~~g~~v 31 (197)
T 3hjn_A 10 GSGKSTQIQLLA--QYLEKRGKKV 31 (197)
T ss_dssp TSSHHHHHHHHH--HHHHHTTCCE
T ss_pred CCCHHHHHHHHH--HHHHHCCCcE
Confidence 589999999764 4566777654
No 416
>1lm5_A Subdomain of desmoplakin carboxy-terminal domain (DPCT); plakin repeat,, structural protein; 1.80A {Homo sapiens} SCOP: d.211.2.1
Probab=30.03 E-value=17 Score=27.82 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=18.2
Q ss_pred HcCCCCCHHHHHHcCcccccc
Q psy7339 156 YTGRKLNAQEALQYGFVSGVF 176 (223)
Q Consensus 156 l~g~~~~a~eA~~~Glv~~v~ 176 (223)
.+|++++-+||.+.|+||+-.
T Consensus 56 ~tg~~lsv~eA~~~GlId~~~ 76 (214)
T 1lm5_A 56 TTGQKLSLQDAVSQGVIDQDM 76 (214)
T ss_dssp TTCCEECHHHHHHTTSSCHHH
T ss_pred CCCCcCCHHHHHHcCCCCHHH
Confidence 388999999999999998654
No 417
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=29.99 E-value=21 Score=24.67 Aligned_cols=12 Identities=25% Similarity=0.335 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 16 ~~GKssli~~l~ 27 (170)
T 1r2q_A 16 AVGKSSLVLRFV 27 (170)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998864
No 418
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=29.94 E-value=14 Score=32.53 Aligned_cols=14 Identities=29% Similarity=0.290 Sum_probs=11.4
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+|||||++|.+.-.
T Consensus 379 GSGKSTLar~La~~ 392 (552)
T 3cr8_A 379 GAGKSTLARALAAR 392 (552)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHh
Confidence 58999999987654
No 419
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=29.75 E-value=21 Score=25.12 Aligned_cols=12 Identities=25% Similarity=0.315 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 22 ~~GKSsli~~l~ 33 (181)
T 2efe_B 22 GAGKSSLVLRFV 33 (181)
T ss_dssp TSCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998875
No 420
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=29.53 E-value=26 Score=28.75 Aligned_cols=16 Identities=31% Similarity=0.258 Sum_probs=13.6
Q ss_pred CCchhHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQI 16 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~ 16 (223)
++|||+++-+|.+..+
T Consensus 35 GaGKT~ileAI~~~l~ 50 (371)
T 3auy_A 35 GSGKSSIFEAVFFALF 50 (371)
T ss_dssp TSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc
Confidence 5899999999998655
No 421
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=29.44 E-value=21 Score=24.79 Aligned_cols=11 Identities=27% Similarity=0.235 Sum_probs=9.2
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
.+|||++++.+
T Consensus 12 ~~GKSsli~~l 22 (166)
T 3q72_A 12 GVGKSALARIF 22 (166)
T ss_dssp TSSHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 37999999876
No 422
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=29.42 E-value=22 Score=25.01 Aligned_cols=12 Identities=17% Similarity=0.382 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 18 ~~GKssl~~~l~ 29 (178)
T 2lkc_A 18 DHGKTTLLDAIR 29 (178)
T ss_dssp TTTHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998874
No 423
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=29.25 E-value=21 Score=29.21 Aligned_cols=13 Identities=31% Similarity=0.429 Sum_probs=10.9
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+||||+++.+.-
T Consensus 84 gaGKSTLln~L~~ 96 (349)
T 2www_A 84 GAGKSTFIEYFGK 96 (349)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4799999998764
No 424
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=29.23 E-value=22 Score=25.10 Aligned_cols=12 Identities=33% Similarity=0.196 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 28 ~~GKSsli~~l~ 39 (187)
T 2a9k_A 28 GVGKSALTLQFM 39 (187)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998865
No 425
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=28.96 E-value=35 Score=35.01 Aligned_cols=75 Identities=17% Similarity=0.142 Sum_probs=44.2
Q ss_pred CCchhHHHHHHHHHHHHHh-hCCcccCCcc-eecc-------ccceeeecccccccccccchHHHHHHHHHHHHHhcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQ-VGCYVPASLA-EFRL-------ADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPR 71 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~-~g~~vpa~~~-~~~~-------~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~ 71 (223)
.+|||+|+.+++....... -.+|+-.+.. .-.. .+.++.. .....+++.++++.+......
T Consensus 44 GsGKT~lalq~a~~~~~~Ge~vlYI~tEes~~~~ra~~lG~dl~~i~v~----------~p~~~e~ll~il~~L~~~~~~ 113 (2050)
T 3cmu_A 44 SSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCS----------QPDTGEQALEICDALARSGAV 113 (2050)
T ss_dssp TSSHHHHHHHHHHHHHTTTCCEEEECTTSCCCHHHHHHTTCCTTTCEEE----------CCSSHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHhhccCCceEEEEccCcchhhHHhhhccCcccceec----------CCCcHHHHHHHHHHHHhccCC
Confidence 4899999999988776432 2445544321 1000 1222111 112345566777777766779
Q ss_pred eEEEEcCCCCCcCC
Q psy7339 72 SLILVDELCRAGIE 85 (223)
Q Consensus 72 ~vvvl~~~g~~F~a 85 (223)
++||+|+....|..
T Consensus 114 ~lVVIDSISaL~~~ 127 (2050)
T 3cmu_A 114 DVIVVDSVAALTPK 127 (2050)
T ss_dssp SEEEESCGGGCCCH
T ss_pred cEEEEcChHHhhhh
Confidence 99999998766553
No 426
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=28.92 E-value=38 Score=26.93 Aligned_cols=33 Identities=9% Similarity=0.006 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCCCCcCCC
Q psy7339 54 FALEMKEIAHIIQFLTPRSLILVDELCRAGIEP 86 (223)
Q Consensus 54 ~~~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG 86 (223)
|...+.++.+.+.+....++||+||.|=+..+|
T Consensus 4 ~~~~i~~l~~~i~~~~a~~ivvltGAGiSt~SG 36 (289)
T 1q1a_A 4 TEMSVRKIAAHMKSNPNAKVIFMVGAGISTSCG 36 (289)
T ss_dssp THHHHHHHHHHHHHSTTSCEEEEECGGGGGGGT
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCceeHhhC
Confidence 344566777777664356899999998777777
No 427
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=28.92 E-value=22 Score=26.90 Aligned_cols=12 Identities=25% Similarity=0.174 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++++.
T Consensus 39 g~GKStlin~l~ 50 (239)
T 3lxx_A 39 GAGKSATGNSIL 50 (239)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHc
Confidence 379999998875
No 428
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=28.77 E-value=23 Score=25.21 Aligned_cols=12 Identities=33% Similarity=0.407 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 11 ~~GKSsli~~l~ 22 (190)
T 2cxx_A 11 NVGKSTLIYRLT 22 (190)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998864
No 429
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=28.74 E-value=23 Score=25.29 Aligned_cols=12 Identities=25% Similarity=0.299 Sum_probs=9.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 33 ~~GKSsli~~l~ 44 (195)
T 3pqc_A 33 NVGKSSLLNALF 44 (195)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998763
No 430
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=28.73 E-value=1.9e+02 Score=26.08 Aligned_cols=79 Identities=13% Similarity=0.017 Sum_probs=42.0
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
++|||++++.++.... ....+..-....+...| ...+.. .......+-..+..+++.+... ...++++++..
T Consensus 217 GtGKT~la~~la~~l~--~~~v~~~~~~~~~~~~~--~~~l~~---~~~~~g~~e~~l~~~~~~~~~~-~~~iL~IDEi~ 288 (758)
T 1r6b_X 217 GVGKTAIAEGLAWRIV--QGDVPEVMADCTIYSLD--IGSLLA---GTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIH 288 (758)
T ss_dssp TSSHHHHHHHHHHHHH--HTCSCGGGTTCEEEECC--CC---C---CCCCSSCHHHHHHHHHHHHSSS-SCEEEEETTTT
T ss_pred CCCHHHHHHHHHHHHH--hCCCChhhcCCEEEEEc--HHHHhc---cccccchHHHHHHHHHHHHHhc-CCeEEEEechH
Confidence 5799999999887543 22222111111111111 000000 0122345666777888877654 35888899887
Q ss_pred CCcCCCC
Q psy7339 81 RAGIEPP 87 (223)
Q Consensus 81 ~~F~aG~ 87 (223)
.-+..|.
T Consensus 289 ~l~~~~~ 295 (758)
T 1r6b_X 289 TIIGAGA 295 (758)
T ss_dssp TTTTSCC
T ss_pred HHhhcCC
Confidence 6665553
No 431
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=28.69 E-value=68 Score=27.02 Aligned_cols=14 Identities=43% Similarity=0.306 Sum_probs=11.6
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+.|||++++.++-.
T Consensus 177 GtGKT~lA~aia~~ 190 (444)
T 2zan_A 177 GTGKSYLAKAVATE 190 (444)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 47999999988754
No 432
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=28.49 E-value=22 Score=24.99 Aligned_cols=12 Identities=33% Similarity=0.313 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 19 ~~GKssl~~~l~ 30 (181)
T 3tw8_B 19 GVGKSSLLLRFA 30 (181)
T ss_dssp TSCHHHHHHHHC
T ss_pred CCCHHHHHHHHh
Confidence 379999998864
No 433
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=28.43 E-value=23 Score=27.17 Aligned_cols=13 Identities=23% Similarity=0.087 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||..+.+.-
T Consensus 39 GsGKsT~a~~L~~ 51 (243)
T 3tlx_A 39 GSGKGTQSLNLKK 51 (243)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999988764
No 434
>1p6x_A Thymidine kinase; P-loop, LID, transferase; HET: THM; 2.00A {Equid herpesvirus 4} SCOP: c.37.1.1 PDB: 1p72_A* 1p73_A* 1p75_A*
Probab=28.42 E-value=22 Score=29.08 Aligned_cols=12 Identities=33% Similarity=0.155 Sum_probs=10.0
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||+++.+.
T Consensus 17 GaGKTT~~~~La 28 (334)
T 1p6x_A 17 GIGKSTTGRVMA 28 (334)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 589999999764
No 435
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=28.17 E-value=24 Score=24.71 Aligned_cols=12 Identities=25% Similarity=0.360 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 24 ~~GKssli~~l~ 35 (179)
T 2y8e_A 24 SVGKTSLITRFM 35 (179)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998765
No 436
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=28.14 E-value=24 Score=24.51 Aligned_cols=12 Identities=25% Similarity=0.174 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 12 ~~GKSsli~~l~ 23 (169)
T 3q85_A 12 GVGKSTLAGTFG 23 (169)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998863
No 437
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=28.07 E-value=22 Score=25.38 Aligned_cols=11 Identities=27% Similarity=0.431 Sum_probs=9.4
Q ss_pred CchhHHHHHHH
Q psy7339 2 SGKSVYIKQVA 12 (223)
Q Consensus 2 ~gks~~~~~i~ 12 (223)
+|||++++.+.
T Consensus 18 ~GKSsli~~l~ 28 (208)
T 3clv_A 18 VGKSSIVLRLT 28 (208)
T ss_dssp SSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 79999998864
No 438
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=27.87 E-value=22 Score=30.79 Aligned_cols=15 Identities=13% Similarity=0.224 Sum_probs=12.4
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||++++++-..
T Consensus 291 GsGKSTLl~~l~g~~ 305 (525)
T 1tf7_A 291 GTGKTLLVSRFVENA 305 (525)
T ss_dssp TSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 589999999987653
No 439
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.80 E-value=1.6e+02 Score=24.91 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=34.0
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
+.|||.+.|.|+- +.|++. ..+..++-.+...+.--.-+..++....... ..+|.+++..
T Consensus 225 GTGKTllAkAiA~-----e~~~~f--------------~~v~~s~l~~~~vGese~~ir~lF~~A~~~a-P~IifiDEiD 284 (434)
T 4b4t_M 225 GTGKTLLARACAA-----QTNATF--------------LKLAAPQLVQMYIGEGAKLVRDAFALAKEKA-PTIIFIDELD 284 (434)
T ss_dssp TSSHHHHHHHHHH-----HHTCEE--------------EEEEGGGGCSSCSSHHHHHHHHHHHHHHHHC-SEEEEEECTH
T ss_pred CCCHHHHHHHHHH-----HhCCCE--------------EEEehhhhhhcccchHHHHHHHHHHHHHhcC-CeEEeecchh
Confidence 5799999998864 445431 1111122222233333445566666555443 4788888765
Q ss_pred CCc
Q psy7339 81 RAG 83 (223)
Q Consensus 81 ~~F 83 (223)
..+
T Consensus 285 al~ 287 (434)
T 4b4t_M 285 AIG 287 (434)
T ss_dssp HHH
T ss_pred hhh
Confidence 433
No 440
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=27.77 E-value=25 Score=24.46 Aligned_cols=12 Identities=17% Similarity=0.335 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 17 ~~GKssl~~~l~ 28 (171)
T 1upt_A 17 GAGKTTILYRLQ 28 (171)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999999874
No 441
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=27.37 E-value=42 Score=27.27 Aligned_cols=29 Identities=21% Similarity=0.076 Sum_probs=18.7
Q ss_pred cchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 51 ASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 51 ~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
...|..+..+.++.+.+. ....|+.-|.|
T Consensus 81 ~~~f~~~a~~~i~~i~~~-g~~pilVGGTg 109 (316)
T 3foz_A 81 AADFRRDALAEMADITAA-GRIPLLVGGTM 109 (316)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred HHHHHHHHHHHHHHHHhC-CCcEEEEcCcH
Confidence 467777777777777654 33455555665
No 442
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=27.31 E-value=14 Score=35.04 Aligned_cols=18 Identities=33% Similarity=0.525 Sum_probs=13.7
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPA 26 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa 26 (223)
++||||++|.+ .|..-|.
T Consensus 709 GSGKSTLLklL--------aGll~P~ 726 (986)
T 2iw3_A 709 GAGKSTLINVL--------TGELLPT 726 (986)
T ss_dssp CHHHHHHHHHH--------TTSSCCS
T ss_pred CCCHHHHHHHH--------hCCCCCC
Confidence 57999999987 4666554
No 443
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=27.27 E-value=25 Score=25.91 Aligned_cols=15 Identities=20% Similarity=0.036 Sum_probs=11.8
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++|||++++.+.-..
T Consensus 55 G~GKT~l~~~~~~~~ 69 (250)
T 1njg_A 55 GVGKTSIARLLAKGL 69 (250)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 479999999886543
No 444
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=27.24 E-value=25 Score=24.89 Aligned_cols=12 Identities=33% Similarity=0.241 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 14 ~~GKSsli~~l~ 25 (189)
T 4dsu_A 14 GVGKSALTIQLI 25 (189)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998875
No 445
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=26.97 E-value=26 Score=24.86 Aligned_cols=12 Identities=33% Similarity=0.429 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 20 ~~GKSsli~~l~ 31 (186)
T 2bme_A 20 GTGKSCLLHQFI 31 (186)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998864
No 446
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=26.93 E-value=13 Score=32.82 Aligned_cols=11 Identities=36% Similarity=0.462 Sum_probs=9.3
Q ss_pred CCchhHHHHHH
Q psy7339 1 MSGKSVYIKQV 11 (223)
Q Consensus 1 ~~gks~~~~~i 11 (223)
+|||||++|.+
T Consensus 377 GsGKSTll~~l 387 (578)
T 4a82_A 377 GGGKSTLINLI 387 (578)
T ss_dssp TSSHHHHHTTT
T ss_pred CChHHHHHHHH
Confidence 58999999864
No 447
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=26.90 E-value=30 Score=26.32 Aligned_cols=21 Identities=19% Similarity=0.153 Sum_probs=14.4
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
++||||++..++.. |+ .|..|
T Consensus 24 GvGKTTl~~~La~~--l~-~g~~v 44 (262)
T 1yrb_A 24 GSGKTTLTGEFGRY--LE-DNYKV 44 (262)
T ss_dssp TSSHHHHHHHHHHH--HT-TTSCE
T ss_pred CCCHHHHHHHHHHH--HH-CCCeE
Confidence 47999999888754 33 45433
No 448
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=26.89 E-value=13 Score=32.78 Aligned_cols=12 Identities=33% Similarity=0.440 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
+|||||++|.+.
T Consensus 379 GsGKSTll~~l~ 390 (587)
T 3qf4_A 379 GSGKSTLMNLIP 390 (587)
T ss_dssp SSSHHHHHHTTT
T ss_pred CCCHHHHHHHHh
Confidence 589999998763
No 449
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=26.80 E-value=26 Score=24.42 Aligned_cols=12 Identities=25% Similarity=0.169 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 14 ~vGKSsl~~~l~ 25 (175)
T 2nzj_A 14 GVGKTSLASLFA 25 (175)
T ss_dssp TSSHHHHHHHHH
T ss_pred CccHHHHHHHHh
Confidence 379999998764
No 450
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=26.75 E-value=16 Score=29.60 Aligned_cols=11 Identities=27% Similarity=0.534 Sum_probs=9.6
Q ss_pred CchhHHHHHHH
Q psy7339 2 SGKSVYIKQVA 12 (223)
Q Consensus 2 ~gks~~~~~i~ 12 (223)
+||||+++.+.
T Consensus 184 ~GKSTLln~L~ 194 (307)
T 1t9h_A 184 VGKSSLLNAIS 194 (307)
T ss_dssp HHHHHHHHHHC
T ss_pred CCHHHHHHHhc
Confidence 69999999874
No 451
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=26.72 E-value=20 Score=30.26 Aligned_cols=11 Identities=27% Similarity=0.501 Sum_probs=9.6
Q ss_pred CchhHHHHHHH
Q psy7339 2 SGKSVYIKQVA 12 (223)
Q Consensus 2 ~gks~~~~~i~ 12 (223)
+||||+++.+.
T Consensus 168 AGKSTLL~~Ls 178 (416)
T 1udx_A 168 AGKSSLLAAMT 178 (416)
T ss_dssp GCHHHHHHHHC
T ss_pred CcHHHHHHHHH
Confidence 79999999874
No 452
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=26.71 E-value=26 Score=24.86 Aligned_cols=12 Identities=25% Similarity=0.213 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 21 ~~GKSsli~~l~ 32 (195)
T 3bc1_A 21 GVGKTSVLYQYT 32 (195)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998764
No 453
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=26.70 E-value=43 Score=26.07 Aligned_cols=29 Identities=10% Similarity=0.078 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCCCCCcCCC
Q psy7339 56 LEMKEIAHIIQFLTPRSLILVDELCRAGIEP 86 (223)
Q Consensus 56 ~el~~~~~~l~~~~~~~vvvl~~~g~~F~aG 86 (223)
+.+.++.+.+++. .++||+||.|=+..+|
T Consensus 3 ~~i~~l~~~l~~a--~~ivv~tGAGiS~~SG 31 (253)
T 1ma3_A 3 DEIRKAAEILAKS--KHAVVFTGAGISAESG 31 (253)
T ss_dssp HHHHHHHHHHHHC--SSEEEEECGGGSCC--
T ss_pred HHHHHHHHHHHhC--CcEEEEEchhhhHhhC
Confidence 3455666666543 4899999999888888
No 454
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=26.56 E-value=25 Score=28.03 Aligned_cols=15 Identities=13% Similarity=0.135 Sum_probs=12.4
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++|||++++.++-..
T Consensus 47 GtGKT~la~~i~~~~ 61 (324)
T 1l8q_A 47 GTGKTHLLQAAGNEA 61 (324)
T ss_dssp SSSHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 579999999988654
No 455
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=26.43 E-value=93 Score=26.72 Aligned_cols=61 Identities=18% Similarity=0.203 Sum_probs=33.1
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVDELC 80 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~~~g 80 (223)
+.|||+++|.|+-. .+.+ +..++..+-.....+.....+..++....... ..+++|++..
T Consensus 248 GtGKT~lAraia~~-----~~~~--------------fv~vn~~~l~~~~~g~~~~~~~~~f~~A~~~~-p~iLfLDEId 307 (489)
T 3hu3_A 248 GTGKTLIARAVANE-----TGAF--------------FFLINGPEIMSKLAGESESNLRKAFEEAEKNA-PAIIFIDELD 307 (489)
T ss_dssp TSSHHHHHHHHHHH-----CSSE--------------EEEEEHHHHHTSCTTHHHHHHHHHHHHHHHTC-SEEEEEESHH
T ss_pred CCCHHHHHHHHHHH-----hCCC--------------EEEEEchHhhhhhcchhHHHHHHHHHHHHhcC-CcEEEecchh
Confidence 47999999998542 2211 12222222222223344445666666665433 4789999875
Q ss_pred C
Q psy7339 81 R 81 (223)
Q Consensus 81 ~ 81 (223)
.
T Consensus 308 ~ 308 (489)
T 3hu3_A 308 A 308 (489)
T ss_dssp H
T ss_pred h
Confidence 3
No 456
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=26.40 E-value=25 Score=24.86 Aligned_cols=12 Identities=33% Similarity=0.152 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 28 ~~GKSsl~~~l~ 39 (183)
T 3kkq_A 28 GVGKSALTIQFF 39 (183)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998875
No 457
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=26.36 E-value=27 Score=24.55 Aligned_cols=12 Identities=17% Similarity=0.254 Sum_probs=9.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 20 ~~GKssli~~l~ 31 (180)
T 2g6b_A 20 GVGKTCLLVRFK 31 (180)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998764
No 458
>4aez_B MAD2, mitotic spindle checkpoint component MAD2; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=26.30 E-value=61 Score=24.45 Aligned_cols=50 Identities=14% Similarity=0.208 Sum_probs=33.2
Q ss_pred HHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHH
Q psy7339 10 QVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKE 60 (223)
Q Consensus 10 ~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~ 60 (223)
.++++.+|-|=|.| |++.|.-...-++...+.+++.++......+..+.+
T Consensus 24 ~~aInsILY~RgIY-P~e~F~~~rky~l~v~~sr~p~l~~YI~~~l~~v~~ 73 (203)
T 4aez_B 24 EYAVNSILFQRGIY-PAEDFKVVRKYGLNMLVSVDEEVKTYIRKIVSQLHK 73 (203)
T ss_dssp HHHHHHHHHHTTSS-CGGGEEEEEETTEEEEEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccC-ChHHchHhhhcCccceeecCHHHHHHHHHHHHHHHH
Confidence 46788889999999 888777544446766777777666544444444333
No 459
>1e2k_A Thymidine kinase; transferase, antiviral drug, enzyme-prodrug gene therapy, sugar ring pucker; HET: TMC; 1.7A {Herpes simplex virus} SCOP: c.37.1.1 PDB: 1e2i_A* 1e2h_A* 1e2m_A* 1e2n_A* 1e2p_A* 1ki2_A* 1ki3_A* 1ki4_A* 1ki6_B* 1ki7_A* 1ki8_A* 3rdp_A* 2ki5_A* 1kim_A* 1qhi_A* 1p7c_A* 1vtk_A* 2vtk_A* 3vtk_A* 3f0t_A* ...
Probab=26.24 E-value=24 Score=28.84 Aligned_cols=13 Identities=15% Similarity=0.118 Sum_probs=10.4
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||+++.+.-
T Consensus 14 GsGKTT~~~~La~ 26 (331)
T 1e2k_A 14 GMGKTTTTQLLVA 26 (331)
T ss_dssp TSSHHHHHHHHTC
T ss_pred CCCHHHHHHHHHH
Confidence 5899999987643
No 460
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=26.06 E-value=27 Score=24.44 Aligned_cols=13 Identities=31% Similarity=0.253 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+|||++++.+.-
T Consensus 16 ~~GKssl~~~l~~ 28 (178)
T 2hxs_A 16 ASGKTSLTTCFAQ 28 (178)
T ss_dssp TSSHHHHHHHHHG
T ss_pred CCCHHHHHHHHHh
Confidence 3799999998764
No 461
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=25.97 E-value=40 Score=25.43 Aligned_cols=18 Identities=22% Similarity=0.277 Sum_probs=13.3
Q ss_pred CCchhHHHHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQIMA 18 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~ 18 (223)
+|||||.+....+.....
T Consensus 86 GsGKTt~~~~~~~~~~~~ 103 (235)
T 3llm_A 86 GCGKTTQVPQFILDDFIQ 103 (235)
T ss_dssp TSSHHHHHHHHHHHHHHH
T ss_pred CCCcHHhHHHHHhcchhh
Confidence 589999988776655543
No 462
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=25.89 E-value=27 Score=25.78 Aligned_cols=14 Identities=29% Similarity=0.304 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
.+||||++..+.-.
T Consensus 40 g~GKTTl~~~l~~~ 53 (221)
T 2wsm_A 40 GSGKTLLIERTIER 53 (221)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 47999998877643
No 463
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=25.80 E-value=28 Score=25.10 Aligned_cols=12 Identities=25% Similarity=0.218 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 33 ~~GKSsli~~l~ 44 (192)
T 2fg5_A 33 GVGKSSIVCRFV 44 (192)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998875
No 464
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=25.61 E-value=1.1e+02 Score=22.72 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=35.1
Q ss_pred cccceeeeccccccccc---ccchHHHHHHHHHHHHHhc------CCCeEEEEcC
Q psy7339 33 LADHIYTRIGFNDSIEC---NASTFALEMKEIAHIIQFL------TPRSLILVDE 78 (223)
Q Consensus 33 ~~d~I~~~~~~~~~~~~---~~s~~~~el~~~~~~l~~~------~~~~vvvl~~ 78 (223)
..|-|+..++.||-... ....+...+.++++.+.+. +..++++++-
T Consensus 101 p~d~VvI~~GtND~~~~~~~~~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p 155 (232)
T 3dci_A 101 PLDLVIIMLGTNDIKPVHGGRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAP 155 (232)
T ss_dssp SCSEEEEECCTTTTSGGGTSSHHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEEC
T ss_pred CCCEEEEEeccCCCccccCCCHHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeC
Confidence 34777888888887654 4567788899999999876 5778888863
No 465
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=25.57 E-value=28 Score=25.14 Aligned_cols=12 Identities=33% Similarity=0.196 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||++..+.
T Consensus 24 ~~GKSsli~~l~ 35 (206)
T 2bov_A 24 GVGKSALTLQFM 35 (206)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999988865
No 466
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=25.49 E-value=27 Score=24.83 Aligned_cols=13 Identities=23% Similarity=0.434 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+|||++++.+.-
T Consensus 31 ~~GKSsli~~l~~ 43 (181)
T 2h17_A 31 NAGKTTILYQFSM 43 (181)
T ss_dssp TSSHHHHHHHHHT
T ss_pred CCCHHHHHHHHhc
Confidence 3799999988754
No 467
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=25.45 E-value=27 Score=25.06 Aligned_cols=12 Identities=17% Similarity=0.307 Sum_probs=9.6
Q ss_pred CchhHHHHHHHH
Q psy7339 2 SGKSVYIKQVAL 13 (223)
Q Consensus 2 ~gks~~~~~i~~ 13 (223)
+|||++++.+.-
T Consensus 36 ~GKSsLi~~l~~ 47 (193)
T 2oil_A 36 VGKTNLLSRFTR 47 (193)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHhc
Confidence 799999987643
No 468
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=25.43 E-value=29 Score=23.92 Aligned_cols=13 Identities=23% Similarity=0.478 Sum_probs=10.6
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+|||++++.+.-
T Consensus 10 ~~GKssl~~~l~~ 22 (164)
T 1r8s_A 10 AAGKTTILYKLKL 22 (164)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHc
Confidence 3799999998754
No 469
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=25.39 E-value=28 Score=24.86 Aligned_cols=12 Identities=33% Similarity=0.340 Sum_probs=9.8
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 26 ~~GKSsli~~l~ 37 (196)
T 3tkl_A 26 GVGKSCLLLRFA 37 (196)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998765
No 470
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=25.17 E-value=29 Score=25.15 Aligned_cols=12 Identities=25% Similarity=0.302 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 18 ~~GKSsli~~l~ 29 (207)
T 1vg8_A 18 GVGKTSLMNQYV 29 (207)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998764
No 471
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=25.10 E-value=28 Score=25.03 Aligned_cols=11 Identities=27% Similarity=0.507 Sum_probs=9.4
Q ss_pred CchhHHHHHHH
Q psy7339 2 SGKSVYIKQVA 12 (223)
Q Consensus 2 ~gks~~~~~i~ 12 (223)
+|||++++.+.
T Consensus 34 ~GKSsli~~l~ 44 (191)
T 3dz8_A 34 VGKTSFLFRYA 44 (191)
T ss_dssp SSHHHHHHHHH
T ss_pred cCHHHHHHHHh
Confidence 79999998764
No 472
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=24.98 E-value=29 Score=24.43 Aligned_cols=12 Identities=17% Similarity=0.279 Sum_probs=9.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 15 ~~GKssl~~~l~ 26 (186)
T 1mh1_A 15 AVGKTCLLISYT 26 (186)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998764
No 473
>1of1_A Thymidine kinase; transferase, antiviral drug, enzyme- prodrug gene, DNA synthesis, ATP-binding; HET: SCT; 1.95A {Herpes simplex virus} SCOP: c.37.1.1
Probab=24.85 E-value=28 Score=29.02 Aligned_cols=13 Identities=15% Similarity=0.118 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
++||||+++.+.-
T Consensus 59 GsGKTT~~~~Lae 71 (376)
T 1of1_A 59 GMGKTTTTQLLVA 71 (376)
T ss_dssp TSSHHHHHHHHHC
T ss_pred CCCHHHHHHHHHH
Confidence 5899999997643
No 474
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=24.84 E-value=23 Score=28.45 Aligned_cols=15 Identities=13% Similarity=-0.060 Sum_probs=12.1
Q ss_pred CCchhHHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALLQ 15 (223)
Q Consensus 1 ~~gks~~~~~i~~~~ 15 (223)
++||||+++.++-..
T Consensus 46 G~GKTtl~~~la~~l 60 (354)
T 1sxj_E 46 GTGKKTRCMALLESI 60 (354)
T ss_dssp TSSHHHHHHTHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 589999999887643
No 475
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=24.67 E-value=48 Score=23.95 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=15.3
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
+.||||+.-. +...|++.|..|
T Consensus 12 G~GKTt~a~~--la~~la~~g~~v 33 (206)
T 4dzz_A 12 GSGKTTAVIN--IATALSRSGYNI 33 (206)
T ss_dssp TSSHHHHHHH--HHHHHHHTTCCE
T ss_pred CccHHHHHHH--HHHHHHHCCCeE
Confidence 4799998755 455677888654
No 476
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=24.61 E-value=35 Score=27.56 Aligned_cols=21 Identities=24% Similarity=0.350 Sum_probs=15.1
Q ss_pred CCchhHHHHHHHHHHHHHhhCCc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCY 23 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~ 23 (223)
++||||++..++.. +++.|.-
T Consensus 115 G~GKTT~~~~LA~~--l~~~g~k 135 (320)
T 1zu4_A 115 GTGKTTSLAKMANY--YAELGYK 135 (320)
T ss_dssp TSSHHHHHHHHHHH--HHHTTCC
T ss_pred CCCHHHHHHHHHHH--HHHCCCe
Confidence 58999999988754 4555543
No 477
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=24.57 E-value=48 Score=26.41 Aligned_cols=29 Identities=7% Similarity=0.123 Sum_probs=21.9
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCCCCcCCC
Q psy7339 58 MKEIAHIIQFLTPRSLILVDELCRAGIEP 86 (223)
Q Consensus 58 l~~~~~~l~~~~~~~vvvl~~~g~~F~aG 86 (223)
+.++.+.+.+....++||+||.|=+..+|
T Consensus 11 l~~la~~i~~~~a~~IvvlTGAGISteSG 39 (285)
T 3glr_A 11 LQDVAELIRARACQRVVVMVGAGISTPSG 39 (285)
T ss_dssp HHHHHHHHHTTSCCCEEEEECGGGTGGGT
T ss_pred HHHHHHHHHhcCCCeEEEEeCCccchhhC
Confidence 45556666665567899999999777777
No 478
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=24.52 E-value=30 Score=24.36 Aligned_cols=12 Identities=33% Similarity=0.246 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 16 ~~GKSsli~~l~ 27 (181)
T 3t5g_A 16 SVGKSSLTIQFV 27 (181)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998875
No 479
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=24.44 E-value=20 Score=27.75 Aligned_cols=12 Identities=25% Similarity=0.581 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
++||||+++.+.
T Consensus 34 GsGKST~~~~L~ 45 (263)
T 1p5z_B 34 AAGKSTFVNILK 45 (263)
T ss_dssp TSSHHHHHTTTG
T ss_pred CCCHHHHHHHHH
Confidence 589999998764
No 480
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=24.33 E-value=31 Score=24.68 Aligned_cols=12 Identities=25% Similarity=0.426 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 32 ~~GKSsli~~l~ 43 (189)
T 2gf9_A 32 SVGKTSFLFRYA 43 (189)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998864
No 481
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=24.33 E-value=30 Score=25.61 Aligned_cols=14 Identities=29% Similarity=0.299 Sum_probs=11.1
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
.+||||++..+.-.
T Consensus 48 gvGKTtl~~~l~~~ 61 (226)
T 2hf9_A 48 GSGKTLLIEKLIDN 61 (226)
T ss_dssp TSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 47999999887654
No 482
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=24.29 E-value=31 Score=24.67 Aligned_cols=12 Identities=17% Similarity=0.210 Sum_probs=9.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 30 ~~GKSsli~~l~ 41 (189)
T 1z06_A 30 NVGKTCLTYRFC 41 (189)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 379999998754
No 483
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=24.19 E-value=31 Score=24.56 Aligned_cols=12 Identities=25% Similarity=0.415 Sum_probs=9.7
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 17 ~vGKSsli~~l~ 28 (184)
T 1m7b_A 17 QCGKTALLHVFA 28 (184)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998764
No 484
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=24.16 E-value=74 Score=32.13 Aligned_cols=74 Identities=18% Similarity=0.128 Sum_probs=42.9
Q ss_pred CCchhHHHHHHHHHHHHHh-hCCcccCCcc-eecc-------ccceeeecccccccccccchHHHHHHHHHHHHHhcCCC
Q psy7339 1 MSGKSVYIKQVALLQIMAQ-VGCYVPASLA-EFRL-------ADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPR 71 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~-~g~~vpa~~~-~~~~-------~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~ 71 (223)
.+|||+|+.+++...+... -.+|+..+.. .-.. .+++... + ....+++.++++.+......
T Consensus 44 GsGKT~LAlqla~~~~~~G~~vlYI~te~~~~~l~~~~lg~dl~~i~i~--~--------p~t~e~l~~ll~~L~~~~~~ 113 (1706)
T 3cmw_A 44 SSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCS--Q--------PDTGEQALEICDALARSGAV 113 (1706)
T ss_dssp TSSHHHHHHHHHHHHHHTTCCEEEECTTSCCCHHHHHHTTCCGGGCEEE--C--------CSSHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHhhCCCceEEEEecCccHHHHHHhhccCccceeee--c--------cCcHHHHHHHHHHHHhccCC
Confidence 4899999999998776432 2344444321 1000 1122111 1 12344566677777666678
Q ss_pred eEEEEcCCCCCcC
Q psy7339 72 SLILVDELCRAGI 84 (223)
Q Consensus 72 ~vvvl~~~g~~F~ 84 (223)
++||+|+.+.-+.
T Consensus 114 ~LVVIDSLt~L~~ 126 (1706)
T 3cmw_A 114 DVIVVDSVAALTP 126 (1706)
T ss_dssp SEEEESCSTTCCC
T ss_pred CEEEEcchhhhcc
Confidence 9999999886554
No 485
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=24.12 E-value=31 Score=25.04 Aligned_cols=12 Identities=25% Similarity=0.310 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 34 ~~GKSsli~~l~ 45 (201)
T 3oes_A 34 CVGKTSLAHQFV 45 (201)
T ss_dssp TSSHHHHHHHHH
T ss_pred CcCHHHHHHHHH
Confidence 379999998865
No 486
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=24.12 E-value=36 Score=27.05 Aligned_cols=22 Identities=27% Similarity=0.215 Sum_probs=15.4
Q ss_pred CCchhHHHHHHHHHHHHHhhCCcc
Q psy7339 1 MSGKSVYIKQVALLQIMAQVGCYV 24 (223)
Q Consensus 1 ~~gks~~~~~i~~~~~l~~~g~~v 24 (223)
++||||+++.++.. +++.|..|
T Consensus 108 G~GKTT~~~~la~~--~~~~~~~v 129 (295)
T 1ls1_A 108 GSGKTTTAAKLALY--YKGKGRRP 129 (295)
T ss_dssp TTTHHHHHHHHHHH--HHHTTCCE
T ss_pred CCCHHHHHHHHHHH--HHHcCCeE
Confidence 58999999988754 45555433
No 487
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=23.94 E-value=29 Score=24.99 Aligned_cols=14 Identities=14% Similarity=0.090 Sum_probs=10.5
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
.+|||++++.+.-.
T Consensus 36 ~~GKSsLi~~l~~~ 49 (192)
T 2il1_A 36 GVGKTSLMERFTDD 49 (192)
T ss_dssp TSSHHHHHHHHCC-
T ss_pred CCCHHHHHHHHhcC
Confidence 37999999987543
No 488
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=23.82 E-value=31 Score=25.30 Aligned_cols=13 Identities=23% Similarity=0.327 Sum_probs=10.1
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+|||+++..+.-
T Consensus 22 g~GKTsl~~~l~~ 34 (218)
T 1nrj_B 22 NSGKTSLLTLLTT 34 (218)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHhc
Confidence 3799999987653
No 489
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=23.79 E-value=24 Score=24.94 Aligned_cols=12 Identities=17% Similarity=0.335 Sum_probs=9.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+||||+++.+.
T Consensus 28 ~~GKssli~~l~ 39 (183)
T 1moz_A 28 GAGKTTILYRLQ 39 (183)
T ss_dssp TSSHHHHHHHTC
T ss_pred CCCHHHHHHHHh
Confidence 379999997764
No 490
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=23.79 E-value=32 Score=24.66 Aligned_cols=13 Identities=23% Similarity=0.184 Sum_probs=10.1
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
.+|||++++.+.-
T Consensus 18 ~~GKSsli~~l~~ 30 (199)
T 2gf0_A 18 GVGKSSLVLRFVK 30 (199)
T ss_dssp TSSHHHHHHHHHH
T ss_pred CCcHHHHHHHHHc
Confidence 3799999988643
No 491
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=23.79 E-value=31 Score=26.45 Aligned_cols=14 Identities=36% Similarity=0.285 Sum_probs=11.7
Q ss_pred CCchhHHHHHHHHH
Q psy7339 1 MSGKSVYIKQVALL 14 (223)
Q Consensus 1 ~~gks~~~~~i~~~ 14 (223)
+.|||++++.++-.
T Consensus 54 GtGKT~la~~la~~ 67 (268)
T 2r62_A 54 GTGKTLLAKAVAGE 67 (268)
T ss_dssp CSSHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 57999999998763
No 492
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=23.69 E-value=32 Score=24.15 Aligned_cols=12 Identities=17% Similarity=0.279 Sum_probs=9.6
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 18 ~~GKssl~~~~~ 29 (182)
T 3bwd_D 18 AVGKTCLLISYT 29 (182)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999997765
No 493
>2elf_A Protein translation elongation factor 1A; tRNA, pyrrolysine, structural genomics, NPPSFA; HET: CIT; 1.70A {Methanosarcina mazei}
Probab=23.48 E-value=40 Score=27.81 Aligned_cols=61 Identities=5% Similarity=0.043 Sum_probs=33.3
Q ss_pred CchhHHHHHHHHHHHHHhhCCcccCCcceeccccceeeecccccccccccchHHHHHHHHHHHHHhcCCCeEEEEc
Q psy7339 2 SGKSVYIKQVALLQIMAQVGCYVPASLAEFRLADHIYTRIGFNDSIECNASTFALEMKEIAHIIQFLTPRSLILVD 77 (223)
Q Consensus 2 ~gks~~~~~i~~~~~l~~~g~~vpa~~~~~~~~d~I~~~~~~~~~~~~~~s~~~~el~~~~~~l~~~~~~~vvvl~ 77 (223)
.||||++..+. .-|..+-.....+..-+.-++.+..++.. .|..++... + ...+.-++|++
T Consensus 32 ~GKSTL~~~L~------~~giTi~~~~~~~~~~~~~i~iiDtPGh~-----~f~~~~~~~---~-~~aD~ailVvd 92 (370)
T 2elf_A 32 SGRTSLAANLG------KKGTSSDITMYNNDKEGRNMVFVDAHSYP-----KTLKSLITA---L-NISDIAVLCIP 92 (370)
T ss_dssp SSHHHHHHTTS------EEEEESSSEEEEECSSSSEEEEEECTTTT-----TCHHHHHHH---H-HTCSEEEEEEC
T ss_pred CCHHHHHHHHH------hCCEEEEeeEEEEecCCeEEEEEECCChH-----HHHHHHHHH---H-HHCCEEEEEEc
Confidence 69999998876 33444333333333333445555555542 344443333 2 34556777777
No 494
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=23.42 E-value=33 Score=24.64 Aligned_cols=12 Identities=33% Similarity=0.440 Sum_probs=9.5
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 30 ~vGKSsL~~~~~ 41 (184)
T 3ihw_A 30 SSGKSALVHRYL 41 (184)
T ss_dssp TSCHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998754
No 495
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=23.34 E-value=29 Score=24.64 Aligned_cols=11 Identities=27% Similarity=0.576 Sum_probs=9.4
Q ss_pred CchhHHHHHHH
Q psy7339 2 SGKSVYIKQVA 12 (223)
Q Consensus 2 ~gks~~~~~i~ 12 (223)
+|||++++.+.
T Consensus 29 ~GKssl~~~l~ 39 (186)
T 1ksh_A 29 AGKTTILKKFN 39 (186)
T ss_dssp SSHHHHHHHHT
T ss_pred CCHHHHHHHHh
Confidence 79999998865
No 496
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=23.27 E-value=33 Score=24.44 Aligned_cols=12 Identities=25% Similarity=0.393 Sum_probs=9.9
Q ss_pred CCchhHHHHHHH
Q psy7339 1 MSGKSVYIKQVA 12 (223)
Q Consensus 1 ~~gks~~~~~i~ 12 (223)
.+|||++++.+.
T Consensus 26 ~~GKssl~~~l~ 37 (187)
T 1zj6_A 26 NAGKTTILYQFS 37 (187)
T ss_dssp TSSHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 379999998875
No 497
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=22.98 E-value=17 Score=32.66 Aligned_cols=13 Identities=38% Similarity=0.475 Sum_probs=10.7
Q ss_pred CCchhHHHHHHHH
Q psy7339 1 MSGKSVYIKQVAL 13 (223)
Q Consensus 1 ~~gks~~~~~i~~ 13 (223)
+|||||+++.|..
T Consensus 358 GsGKSTLl~~i~~ 370 (670)
T 3ux8_A 358 GSGKSTLVNEVLY 370 (670)
T ss_dssp TSSHHHHHTTTHH
T ss_pred CCCHHHHHHHHHH
Confidence 5899999997743
No 498
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=22.96 E-value=32 Score=24.47 Aligned_cols=10 Identities=40% Similarity=0.617 Sum_probs=7.9
Q ss_pred CchhHHHHHH
Q psy7339 2 SGKSVYIKQV 11 (223)
Q Consensus 2 ~gks~~~~~i 11 (223)
+|||++++.+
T Consensus 25 ~GKssL~~~l 34 (198)
T 3t1o_A 25 SGKTTNLKWI 34 (198)
T ss_dssp SSHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7999998644
No 499
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=22.94 E-value=3.7e+02 Score=23.27 Aligned_cols=45 Identities=16% Similarity=0.096 Sum_probs=30.1
Q ss_pred CHHHHHHHHHcCCCCCHH-----HHH--HcCccccccCCh-hHHHhHHHHHHHHh
Q psy7339 147 GNSVASELLYTGRKLNAQ-----EAL--QYGFVSGVFTTE-EIERDLWPRIHAWA 193 (223)
Q Consensus 147 g~~~a~~l~l~g~~~~a~-----eA~--~~Glv~~v~~~~-~l~~~a~~~a~~l~ 193 (223)
|++..+. .+|+.++.+ |.+ +.|++|.+++++ ++.+.++++..-+-
T Consensus 202 GP~vI~~--~~ge~~~~e~lggae~~~~~~G~~d~vv~~~~~~~~~~~~ll~~lp 254 (522)
T 1x0u_A 202 GPEITKV--VLGEEVSFQDLGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYLP 254 (522)
T ss_dssp CHHHHHH--TTCCCCCHHHHHBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHSC
T ss_pred CHHHHHH--HhCCcCChhhcchHHHHhhcCceeEEEeCCHHHHHHHHHHHHHhcc
Confidence 5544443 568888864 323 689999999964 56677777766554
No 500
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=22.93 E-value=32 Score=25.01 Aligned_cols=12 Identities=33% Similarity=0.448 Sum_probs=10.1
Q ss_pred CchhHHHHHHHH
Q psy7339 2 SGKSVYIKQVAL 13 (223)
Q Consensus 2 ~gks~~~~~i~~ 13 (223)
+|||++++.+.-
T Consensus 36 ~GKSsLi~~l~~ 47 (200)
T 2o52_A 36 TGKSCLLHQFIE 47 (200)
T ss_dssp SSHHHHHHHHHC
T ss_pred CCHHHHHHHHHh
Confidence 799999998753
Done!