Query psy7340
Match_columns 440
No_of_seqs 481 out of 2021
Neff 5.1
Searched_HMMs 29240
Date Sat Aug 17 00:16:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7340.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7340hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cru_A Programmed cell death p 100.0 2.3E-29 8E-34 218.8 10.9 90 15-104 26-116 (118)
2 2fh0_A Hypothetical 16.0 kDa p 99.9 7E-29 2.4E-33 202.4 2.7 76 24-99 3-80 (81)
3 2jxn_A Uncharacterized protein 99.9 1.3E-29 4.6E-34 223.0 -3.5 85 18-102 32-116 (127)
4 1eij_A Hypothetical protein MT 99.9 5.9E-28 2E-32 196.8 2.4 75 23-100 4-78 (80)
5 2hvu_A PDCD5-like protein; YMR 99.9 1.3E-28 4.4E-33 213.3 -6.9 81 19-99 33-115 (116)
6 2cru_A Programmed cell death p 99.9 1E-23 3.5E-28 183.4 9.4 95 199-297 8-102 (118)
7 2jxn_A Uncharacterized protein 99.8 7.1E-24 2.4E-28 186.6 -6.1 102 200-302 9-110 (127)
8 2hvu_A PDCD5-like protein; YMR 99.8 1.9E-23 6.5E-28 181.0 -7.8 97 200-299 9-107 (116)
9 2fh0_A Hypothetical 16.0 kDa p 99.8 1.6E-21 5.6E-26 159.0 2.0 65 230-294 3-67 (81)
10 1eij_A Hypothetical protein MT 99.8 1.7E-21 5.9E-26 158.7 1.6 68 229-296 4-71 (80)
11 1uwy_A Carboxypeptidase M; met 99.4 2.5E-13 8.5E-18 140.3 9.1 105 299-405 280-390 (426)
12 3mn8_A LP15968P; catalytic dom 99.4 2.3E-13 7.7E-18 141.2 8.5 101 303-405 325-429 (435)
13 2nsm_A Carboxypeptidase N cata 99.4 7.2E-13 2.4E-17 137.2 8.5 104 300-406 306-410 (439)
14 1h8l_A Carboxypeptidase GP180 99.3 2.9E-12 1E-16 130.1 9.3 94 299-392 285-379 (380)
15 1nkg_A Rhamnogalacturonase B; 97.5 0.00033 1.1E-08 74.2 9.9 87 313-406 256-346 (508)
16 3e8v_A Possible transglutamina 96.6 0.013 4.6E-07 47.7 9.6 72 317-391 3-81 (82)
17 2xsu_A Catechol 1,2 dioxygenas 96.1 0.013 4.5E-07 58.5 8.5 64 314-377 136-243 (312)
18 3kcp_A Cellulosomal-scaffoldin 96.0 0.0066 2.3E-07 60.7 5.3 61 315-375 158-228 (321)
19 2boy_A 3-chlorocatechol 1,2-di 95.6 0.033 1.1E-06 54.1 8.3 47 315-361 103-168 (254)
20 2azq_A Catechol 1,2-dioxygenas 95.5 0.037 1.3E-06 55.2 8.8 47 315-361 133-198 (311)
21 3th1_A Chlorocatechol 1,2-diox 95.1 0.05 1.7E-06 53.0 8.1 46 315-360 100-164 (260)
22 1dmh_A 1,2-CTD, catechol 1,2-d 94.5 0.092 3.1E-06 52.4 8.2 48 314-361 133-201 (311)
23 1tmx_A Hydroxyquinol 1,2-dioxy 94.3 0.12 4E-06 51.3 8.5 47 315-361 134-198 (293)
24 3o5u_A Chlorocatechol 1,2-diox 94.0 0.17 5.8E-06 49.2 8.7 47 315-361 104-170 (257)
25 3n9t_A PNPC; phospholipid bind 93.9 0.13 4.3E-06 50.9 7.8 47 315-361 130-195 (290)
26 3hhy_A 1,2-CTD, catechol 1,2-d 93.6 0.22 7.4E-06 49.0 8.7 48 314-361 131-197 (280)
27 2bum_A Protocatechuate 3,4-dio 93.5 0.14 4.7E-06 48.3 7.0 47 315-361 53-124 (209)
28 2bum_B Protocatechuate 3,4-dio 93.2 0.15 5E-06 49.2 6.7 48 315-362 79-150 (241)
29 3irp_X URO-adherence factor A; 92.1 0.19 6.4E-06 52.1 6.3 57 315-371 306-377 (429)
30 3t63_M 3,4-PCD, protocatechuat 91.5 0.26 8.9E-06 47.4 6.1 48 315-362 78-149 (238)
31 3t63_A 3,4-PCD, protocatechuat 91.4 0.27 9.3E-06 46.0 5.9 48 315-362 49-116 (200)
32 1ti6_B Pyrogallol hydroxytrans 87.6 1.8 6.3E-05 41.9 8.8 54 324-378 205-262 (274)
33 1cwv_A Invasin; integrin-bindi 85.8 3 0.0001 43.7 9.8 63 315-378 28-99 (492)
34 3g3l_A Putative uncharacterize 82.8 1.4 4.9E-05 41.9 5.2 61 313-377 13-74 (327)
35 3qva_A Transthyretin-like prot 82.7 1.2 4.1E-05 38.4 4.3 54 316-369 11-72 (116)
36 2ww8_A RRGA, cell WALL surface 80.7 4 0.00014 45.9 8.7 65 316-380 49-123 (893)
37 4eiu_A Uncharacterized hypothe 80.5 9.5 0.00032 36.8 10.1 51 315-365 10-76 (249)
38 1cwv_A Invasin; integrin-bindi 78.5 4.2 0.00015 42.5 7.6 56 315-370 126-187 (492)
39 3kpt_A Collagen adhesion prote 77.3 2.5 8.7E-05 42.2 5.3 50 322-371 15-72 (355)
40 4fxt_A Uncharacterized protein 77.2 7.1 0.00024 36.5 8.0 50 315-365 8-67 (202)
41 2pz4_A Protein GBS052; SPAB, G 76.1 1.9 6.6E-05 40.5 3.9 43 322-364 25-94 (239)
42 2g2n_A Transthyretin-like prot 71.3 3.4 0.00012 35.4 3.9 54 316-369 5-71 (114)
43 3hn5_A Putative exported prote 69.6 12 0.0004 35.5 7.5 50 315-365 11-71 (215)
44 2x5p_A FBA2, fibronectin bindi 69.1 12 0.0004 32.1 6.8 54 317-371 30-89 (121)
45 2h0e_A Transthyretin-like prot 68.5 2.5 8.7E-05 36.6 2.5 54 316-369 10-74 (121)
46 1f00_I Intimin; immunoglobulin 68.1 6.8 0.00023 38.4 5.7 53 315-368 21-81 (282)
47 2pz4_A Protein GBS052; SPAB, G 67.2 10 0.00036 35.4 6.7 46 327-372 141-208 (239)
48 4ank_A Transthyretin; hormone 66.6 3.8 0.00013 36.6 3.2 51 316-366 31-95 (147)
49 3iwv_A 5-hydroxyisourate hydro 65.9 2.5 8.4E-05 37.5 1.9 55 315-369 26-95 (138)
50 1xpn_A Hypothetical protein PA 65.2 10 0.00034 34.7 5.8 25 341-365 109-134 (170)
51 1oo2_A Transthyretin; retinol- 63.4 3.7 0.00013 35.4 2.5 53 316-368 3-69 (119)
52 2hr0_A Complement C3 beta chai 59.5 13 0.00046 39.3 6.6 52 316-367 349-405 (645)
53 1f86_A Transthyretin Thr119Met 59.0 7.5 0.00026 33.2 3.6 54 316-369 2-69 (115)
54 3l48_A Outer membrane usher pr 57.7 13 0.00045 30.4 4.8 50 316-366 9-60 (94)
55 3qec_A Putative carbohydrate b 57.1 8.3 0.00029 34.5 3.7 25 341-365 89-114 (150)
56 3o59_X DNA polymerase II large 53.7 4.6 0.00016 39.7 1.6 52 92-144 123-195 (300)
57 2h4e_A Transthyretin; amyloid, 52.3 12 0.00041 32.6 3.9 53 316-368 11-77 (127)
58 2x9x_A RRGB, cell WALL surface 52.2 16 0.00055 37.7 5.5 29 343-371 372-403 (444)
59 3kpt_A Collagen adhesion prote 47.9 26 0.0009 34.8 6.1 44 322-365 258-313 (355)
60 3tkv_A FDEC fragment B, attach 43.4 23 0.00077 36.0 4.9 56 315-370 212-279 (414)
61 3tkv_A FDEC fragment B, attach 40.3 16 0.00056 37.1 3.3 53 317-369 111-176 (414)
62 2ahq_A Sigma-54, RNA polymeras 39.8 10 0.00035 30.1 1.3 50 55-104 18-67 (76)
63 3pe9_A Fibronectin(III)-like m 39.5 54 0.0018 26.8 5.7 51 315-368 19-71 (98)
64 3hrz_A Cobra venom factor; ser 39.2 51 0.0017 35.2 7.1 53 315-367 338-394 (627)
65 2y1v_A RRGB, cell WALL surface 36.2 38 0.0013 36.3 5.5 30 343-372 527-559 (605)
66 3pdd_A Glycoside hydrolase, fa 33.6 72 0.0025 28.7 6.2 53 315-368 111-163 (190)
67 2ee9_A Filamin-B; beta-sandwic 33.5 74 0.0025 25.9 5.6 44 316-369 31-77 (95)
68 2xet_A CAF1A usher, F1 capsule 31.3 1E+02 0.0035 24.2 6.0 48 318-366 5-55 (89)
69 2b39_A C3; thioester, immune d 31.1 28 0.00097 41.4 3.7 50 317-366 371-424 (1661)
70 2dm9_A V-type ATP synthase sub 29.7 1.5E+02 0.005 25.8 7.4 110 27-150 78-197 (198)
71 3cu7_A Complement C5; Mg domai 29.2 73 0.0025 38.0 6.8 52 315-366 369-437 (1676)
72 4efa_E V-type proton ATPase su 28.9 1.8E+02 0.006 26.8 8.1 125 25-150 89-223 (233)
73 2p9r_A Alpha-2-M, alpha-2-macr 26.0 2.4E+02 0.0081 22.1 8.0 53 315-367 19-85 (102)
74 2pn5_A TEP1R, thioester-contai 25.5 4E+02 0.014 30.7 11.9 81 315-395 117-212 (1325)
75 2d7n_A Filamin-C; beta-sandwic 24.3 1.5E+02 0.0051 23.8 5.9 44 316-369 23-69 (93)
76 2lv4_A Putative outer membrane 23.3 1.2E+02 0.0042 26.5 5.4 60 315-378 66-130 (146)
77 4ep8_A Urease subunit gamma; a 21.1 68 0.0023 26.8 3.2 35 242-276 16-51 (100)
78 2dm9_A V-type ATP synthase sub 20.7 3.4E+02 0.012 23.3 8.1 59 228-289 73-134 (198)
79 4fur_A Urease subunit gamma 2; 20.5 77 0.0026 26.7 3.4 34 243-276 21-55 (104)
80 3bid_A UPF0339 protein NMB1088 20.1 74 0.0025 24.3 3.0 30 343-372 5-34 (64)
No 1
>2cru_A Programmed cell death protein 5; three helix bundle, apoptosis, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.6.1 PDB: 2k6b_A
Probab=99.96 E-value=2.3e-29 Score=218.77 Aligned_cols=90 Identities=46% Similarity=0.637 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHhhhccccCchHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHhhhhhccc
Q psy7340 15 KAAQERQEQIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIMNKLGENELIGLLEQISNREEKK 94 (440)
Q Consensus 15 ~~~~~~~~~~e~~~~~~L~qiL~~eAreRL~~i~lvkPe~a~~vE~~li~~aq~G~i~~kv~e~~l~~iL~~i~~~~~~~ 94 (440)
+++++++++++++|++||+||||||||+||+||+|||||+|++||+|||+|||+|+|++||||++||+||++|+.++.++
T Consensus 26 ~~~e~~~~~~ee~r~~iL~qiLtpeAreRL~rI~lVKPEkA~~VE~~LI~lAq~Gqi~~kItee~Lk~lL~~i~~~~~~~ 105 (118)
T 2cru_A 26 AAQQEAKHREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKT 105 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHBCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTCCCSCBCHHHHHHHHHHHTTSCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHHHHhccCCC
Confidence 44556677889999999999999999999999999999999999999999999999999999999999999999877777
Q ss_pred ceeEeccc-cC
Q psy7340 95 SSVKTPKF-WG 104 (440)
Q Consensus 95 ~~vk~~~~-~~ 104 (440)
++|+|... |+
T Consensus 106 ~~i~i~Rr~~~ 116 (118)
T 2cru_A 106 TTVKFNRSGPS 116 (118)
T ss_dssp CCCCCCCCCCC
T ss_pred ceeEeeecCCC
Confidence 77777544 54
No 2
>2fh0_A Hypothetical 16.0 kDa protein in ABF2-CHL12 intergenic region; ensemble, YMR074CP, unknown function; NMR {Saccharomyces cerevisiae}
Probab=99.94 E-value=7e-29 Score=202.37 Aligned_cols=76 Identities=20% Similarity=0.379 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhcCHHHHHHhhhccccCchHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHhh--hhhcccceeEe
Q psy7340 24 IKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIMNKLGENELIGLLEQIS--NREEKKSSVKT 99 (440)
Q Consensus 24 ~e~~~~~~L~qiL~~eAreRL~~i~lvkPe~a~~vE~~li~~aq~G~i~~kv~e~~l~~iL~~i~--~~~~~~~~vk~ 99 (440)
+|++|++||+||||||||+||+||+|||||+|++||+|||+|||+|+|++||||++||+||++++ ++++++++|+|
T Consensus 3 ~e~~r~~iL~qiL~~eAreRL~rI~lvKPe~A~~VE~~Li~lAq~Gqi~~ki~e~~L~~lL~~i~~~~~~~~~tkI~f 80 (81)
T 2fh0_A 3 NSAPVGAAIANFLEPQALERLSRVALVRRDRAQAVETYLKKLIATNNVTHKITEAEIVSILNGIAKQQNSQNNSKIIF 80 (81)
T ss_dssp TCCCSSHHHHTTBCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTCCSCCBCHHHHHHHHHHHHHHCSSCCCSSCCC
T ss_pred HHHHHHHHHHHHcCHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHHHhHhhccCccceeee
Confidence 46789999999999999999999999999999999999999999999999999999999999999 66666777776
No 3
>2jxn_A Uncharacterized protein YMR074C; YMR074CP, PDCD5-like protein, phosphoprotein, unknown functi; HET: MTN; NMR {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-29 Score=223.04 Aligned_cols=85 Identities=18% Similarity=0.320 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHhhhccccCchHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHhhhhhccccee
Q psy7340 18 QERQEQIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIMNKLGENELIGLLEQISNREEKKSSV 97 (440)
Q Consensus 18 ~~~~~~~e~~~~~~L~qiL~~eAreRL~~i~lvkPe~a~~vE~~li~~aq~G~i~~kv~e~~l~~iL~~i~~~~~~~~~v 97 (440)
++++++++++|++||++|||||||+||+||+|||||||++||+|||+|||+|+|++||||++||+||++|++++++++++
T Consensus 32 ~~~~~~~ee~r~~iL~qiL~peAreRL~rI~lVkPekA~~VE~~Li~lAq~Gql~~kVsE~~Lk~iL~~vs~~~~kk~~~ 111 (127)
T 2jxn_A 32 NNGGGENSAPVGAAIANFLEPQALERLSRVALVRRDRAQAVETYLKKLIATNNVTHKITEAEIVSILNGIAKQQNSQNNS 111 (127)
T ss_dssp CCSCCSSCCCTTHHHHTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSCBCHHHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHhcccccCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHHHhhhcccCcce
Confidence 34445677889999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred Eeccc
Q psy7340 98 KTPKF 102 (440)
Q Consensus 98 k~~~~ 102 (440)
||.|.
T Consensus 112 KI~f~ 116 (127)
T 2jxn_A 112 KIIFE 116 (127)
T ss_dssp SCSCC
T ss_pred eEeee
Confidence 88775
No 4
>1eij_A Hypothetical protein MTH1615; beta-helix, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: a.5.6.1
Probab=99.94 E-value=5.9e-28 Score=196.76 Aligned_cols=75 Identities=31% Similarity=0.548 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHhhhccccCchHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHhhhhhcccceeEec
Q psy7340 23 QIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIMNKLGENELIGLLEQISNREEKKSSVKTP 100 (440)
Q Consensus 23 ~~e~~~~~~L~qiL~~eAreRL~~i~lvkPe~a~~vE~~li~~aq~G~i~~kv~e~~l~~iL~~i~~~~~~~~~vk~~ 100 (440)
++|++|++||+||||||||+||+||+|||||+|++||+|||+|||+|+|++||||++||+||+++++++ + +|+|+
T Consensus 4 ~~ee~r~~iL~qiL~~eAreRL~rI~lvKPe~A~~VE~~Li~lAq~Gqi~~ki~e~~L~~lL~~i~~~~-~--~i~i~ 78 (80)
T 1eij_A 4 QLEMQKKQIMMQILTPEARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKRVAGKK-R--EIKIS 78 (80)
T ss_dssp SSCCSSHHHHTTTCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHCCSSCCCCCHHHHHHHHHHHSCCC---------
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHHHcccc-C--ceeec
Confidence 457889999999999999999999999999999999999999999999999999999999999998654 2 36664
No 5
>2hvu_A PDCD5-like protein; YMR074CP, solution structure, unknown function; NMR {Saccharomyces cerevisiae} PDB: 2jxn_A*
Probab=99.93 E-value=1.3e-28 Score=213.30 Aligned_cols=81 Identities=19% Similarity=0.363 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHhhhccccCchHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHhhhhhccc--ce
Q psy7340 19 ERQEQIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIMNKLGENELIGLLEQISNREEKK--SS 96 (440)
Q Consensus 19 ~~~~~~e~~~~~~L~qiL~~eAreRL~~i~lvkPe~a~~vE~~li~~aq~G~i~~kv~e~~l~~iL~~i~~~~~~~--~~ 96 (440)
+++++++++|++||++||||+||+||+||+|||||+|++||+|||+|||+|+|++||||++||+||++|+.+++++ ++
T Consensus 33 e~~~~~ee~r~~iL~qiLt~eAreRL~rI~lvkPe~A~~VE~~li~laq~Gql~~ki~e~~L~~lL~~i~~~~~kk~~~k 112 (116)
T 2hvu_A 33 NGGGENSAPVGAAIANFLEPQALERLSRVALVRRDRAQAVETYLKKLIATNNVTHKITEAEIVSILNGIAKQQNSQNNSK 112 (116)
T ss_dssp SCSSSCCCCSSTTTTTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCBCHHHHHHHHHHHHHHCCSCCCSS
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHHHhHHHhhccCCc
Confidence 3455678999999999999999999999999999999999999999999999999999999999999999988776 44
Q ss_pred eEe
Q psy7340 97 VKT 99 (440)
Q Consensus 97 vk~ 99 (440)
|+|
T Consensus 113 I~f 115 (116)
T 2hvu_A 113 IIF 115 (116)
T ss_dssp SSC
T ss_pred eee
Confidence 444
No 6
>2cru_A Programmed cell death protein 5; three helix bundle, apoptosis, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.6.1 PDB: 2k6b_A
Probab=99.89 E-value=1e-23 Score=183.38 Aligned_cols=95 Identities=42% Similarity=0.589 Sum_probs=83.9
Q ss_pred cCCCccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhhhccccchhhHHHHHHHHHHHHhcCCcc
Q psy7340 199 GRGGGLRGHVMRGGGGASGEQQKAAQERQEQIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIM 278 (440)
Q Consensus 199 ~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~e~~~~~il~qiLt~eAreRL~~i~lvkpe~a~~VE~~LiqLAqsG~It 278 (440)
=|..+|.++..++|+ +.. +++++++++++++|++||+||||||||+||+||+|||||+|+.||++|++||++|+|+
T Consensus 8 iR~~rl~eLq~q~g~-~~~---~~~e~~~~~~ee~r~~iL~qiLtpeAreRL~rI~lVKPEkA~~VE~~LI~lAq~Gqi~ 83 (118)
T 2cru_A 8 LRRQRLAELQAKHGD-PGD---AAQQEAKHREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLS 83 (118)
T ss_dssp CCCCCCCCCCCCSSC-CTH---HHHHHHHHHHHHHHHHHHHHHBCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhCC-cch---hHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCC
Confidence 477899999888764 222 4556667788899999999999999999999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHhhhhh
Q psy7340 279 NKLGENELIGLLEQISNRE 297 (440)
Q Consensus 279 ~KISDe~LkeIL~qis~qt 297 (440)
.+|+|++|+.||+.++.++
T Consensus 84 ~kItee~Lk~lL~~i~~~~ 102 (118)
T 2cru_A 84 EKVSEQGLIEILKKVSQQT 102 (118)
T ss_dssp SCBCHHHHHHHHHHHTTSC
T ss_pred CCcCHHHHHHHHHHHHhcc
Confidence 9999999999999987544
No 7
>2jxn_A Uncharacterized protein YMR074C; YMR074CP, PDCD5-like protein, phosphoprotein, unknown functi; HET: MTN; NMR {Saccharomyces cerevisiae}
Probab=99.85 E-value=7.1e-24 Score=186.62 Aligned_cols=102 Identities=19% Similarity=0.341 Sum_probs=85.3
Q ss_pred CCCccccccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhhhccccchhhHHHHHHHHHHHHhcCCccc
Q psy7340 200 RGGGLRGHVMRGGGGASGEQQKAAQERQEQIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIMN 279 (440)
Q Consensus 200 ~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~e~~~~~il~qiLt~eAreRL~~i~lvkpe~a~~VE~~LiqLAqsG~It~ 279 (440)
|..||.++..+.||+++.+. +++++++++.+++|++||++|||||||+||+||+|||||+|+.||++|++||++|+|+.
T Consensus 9 R~~Rl~ELq~q~~~~~~~~~-~~~~~~~~~~ee~r~~iL~qiL~peAreRL~rI~lVkPekA~~VE~~Li~lAq~Gql~~ 87 (127)
T 2jxn_A 9 RECRLAQLKNNSGGTNGDRN-SGANNGGGENSAPVGAAIANFLEPQALERLSRVALVRRDRAQAVETYLKKLIATNNVTH 87 (127)
T ss_dssp HHHHHHHSSCCSCCCSSCCC-CCSCCSCCSSCCCTTHHHHTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHhcCCCCcchh-hhHHHHHHHHHHHHHHHHHHHcCHHHHHHHhcccccCHHHHHHHHHHHHHHHHcCCCCC
Confidence 56688888887776554432 22334445667889999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHhhhhhhhccc
Q psy7340 280 KLGENELIGLLEQISNREEKKSS 302 (440)
Q Consensus 280 KISDe~LkeIL~qis~qt~kKSs 302 (440)
+|+|+.|+.||+.++.++..++.
T Consensus 88 kVsE~~Lk~iL~~vs~~~~kk~~ 110 (127)
T 2jxn_A 88 KITEAEIVSILNGIAKQQNSQNN 110 (127)
T ss_dssp CBCHHHHHHHHHHHHHHCCSCCC
T ss_pred CcCHHHHHHHHHHHhhhcccCcc
Confidence 99999999999999876655443
No 8
>2hvu_A PDCD5-like protein; YMR074CP, solution structure, unknown function; NMR {Saccharomyces cerevisiae} PDB: 2jxn_A*
Probab=99.83 E-value=1.9e-23 Score=180.99 Aligned_cols=97 Identities=19% Similarity=0.331 Sum_probs=82.2
Q ss_pred CCCccccccccCCCCCC--hHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhhhccccchhhHHHHHHHHHHHHhcCCc
Q psy7340 200 RGGGLRGHVMRGGGGAS--GEQQKAAQERQEQIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQI 277 (440)
Q Consensus 200 ~~~~~~~~~~~~~g~~~--~e~~~~~~~~~~~~e~~~~~il~qiLt~eAreRL~~i~lvkpe~a~~VE~~LiqLAqsG~I 277 (440)
|..||.++..++|++++ ++.+ ++++++++++|++||++|||||||+||+||+|||||+|+.||++|++||++|+|
T Consensus 9 R~~rl~eLq~q~~~~~~~~~~~q---~e~~~~~ee~r~~iL~qiLt~eAreRL~rI~lvkPe~A~~VE~~li~laq~Gql 85 (116)
T 2hvu_A 9 RECRLAQLKNNSGGTNGDRNSGA---NNGGGENSAPVGAAIANFLEPQALERLSRVALVRRDRAQAVETYLKKLIATNNV 85 (116)
T ss_dssp HHHHHHTCSCTTSCSSCCCCCCS---SSCSSSCCCCSSTTTTTTBCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhccCCCCcchhH---HHHHHHHHHHHHHHHHHHcCHHHHHHHHhHhhcCHHHHHHHHHHHHHHHHcCCC
Confidence 56788888877665432 2222 344556788999999999999999999999999999999999999999999999
Q ss_pred cccccchhHHHHHHHhhhhhhh
Q psy7340 278 MNKLGENELIGLLEQISNREEK 299 (440)
Q Consensus 278 t~KISDe~LkeIL~qis~qt~k 299 (440)
+.+|+|+.|+.||+.++.++.+
T Consensus 86 ~~ki~e~~L~~lL~~i~~~~~k 107 (116)
T 2hvu_A 86 THKITEAEIVSILNGIAKQQNS 107 (116)
T ss_dssp SSCBCHHHHHHHHHHHHHHCCS
T ss_pred CCCcCHHHHHHHHHHHhHHHhh
Confidence 9999999999999999866543
No 9
>2fh0_A Hypothetical 16.0 kDa protein in ABF2-CHL12 intergenic region; ensemble, YMR074CP, unknown function; NMR {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.6e-21 Score=158.99 Aligned_cols=65 Identities=22% Similarity=0.414 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHhhhccccchhhHHHHHHHHHHHHhcCCccccccchhHHHHHHHhh
Q psy7340 230 IKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIMNKLGENELIGLLEQIS 294 (440)
Q Consensus 230 ~e~~~~~il~qiLt~eAreRL~~i~lvkpe~a~~VE~~LiqLAqsG~It~KISDe~LkeIL~qis 294 (440)
+|++|++||+||||||||+||+||+|||||+|++||++|++||++|+|+.+++|++|+.+|++++
T Consensus 3 ~e~~r~~iL~qiL~~eAreRL~rI~lvKPe~A~~VE~~Li~lAq~Gqi~~ki~e~~L~~lL~~i~ 67 (81)
T 2fh0_A 3 NSAPVGAAIANFLEPQALERLSRVALVRRDRAQAVETYLKKLIATNNVTHKITEAEIVSILNGIA 67 (81)
T ss_dssp TCCCSSHHHHTTBCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTCCSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHHHh
Confidence 45779999999999999999999999999999999999999999999999999999999999987
No 10
>1eij_A Hypothetical protein MTH1615; beta-helix, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: a.5.6.1
Probab=99.82 E-value=1.7e-21 Score=158.68 Aligned_cols=68 Identities=32% Similarity=0.555 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHhCCHHHHHHhhhccccchhhHHHHHHHHHHHHhcCCccccccchhHHHHHHHhhhh
Q psy7340 229 QIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTGQIMNKLGENELIGLLEQISNR 296 (440)
Q Consensus 229 ~~e~~~~~il~qiLt~eAreRL~~i~lvkpe~a~~VE~~LiqLAqsG~It~KISDe~LkeIL~qis~q 296 (440)
++|++|++||+||||||||+||+||+|||||+|++||++|+++|++|+|+.+++|++|+.+|++++.+
T Consensus 4 ~~ee~r~~iL~qiL~~eAreRL~rI~lvKPe~A~~VE~~Li~lAq~Gqi~~ki~e~~L~~lL~~i~~~ 71 (80)
T 1eij_A 4 QLEMQKKQIMMQILTPEARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKRVAGK 71 (80)
T ss_dssp SSCCSSHHHHTTTCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHCCSSCCCCCHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHcCCCCCCcCHHHHHHHHHHHccc
Confidence 45678999999999999999999999999999999999999999999999999999999999998643
No 11
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=99.42 E-value=2.5e-13 Score=140.28 Aligned_cols=105 Identities=27% Similarity=0.477 Sum_probs=85.1
Q ss_pred hccchhhhHHHhhhcceeEEEEEECCCCCcccccEEEEecccee--eeeCCCccEEEEecCCceEEEEEEeccceeEEEE
Q psy7340 299 KKSSVKSLVKFLAEAHRGVQGFVTDDLGNPVEKASLKIKGRDVG--FQTTKYGEFWRILLPGIYKLEVYADGYVPREIDF 376 (440)
Q Consensus 299 kKSsv~~l~~~~~q~~~~IsG~V~D~~GePL~GAtV~IkGt~~g--t~TD~~G~F~l~lp~G~ytL~VS~IGY~~q~itI 376 (440)
+..+..+++.++.+++.+|+|+|+|++|+||+||+|.++|++.+ ++||.+|.|++.+++|.|+|.|+++||.++...+
T Consensus 280 ~~~n~~all~~l~qv~~~I~G~V~D~~g~pi~gA~V~v~g~~~~~~~~Td~~G~y~~~l~~G~Y~l~vs~~Gy~~~~~~v 359 (426)
T 1uwy_A 280 WNNNKASLIEYIKQVHLGVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHITKV 359 (426)
T ss_dssp HHTTHHHHHHHHGGGGCSEEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEECCCSEEEEEEEECSSSCCEEEEE
T ss_pred HHHhHHHhhhhhccccceeEEEEECCCCCccCceEEEEEeccccceeEeCCCCEEEeccCCeeEEEEEEEcCcccEEEEE
Confidence 35566778889999999999999999999999999999999988 9999999998888999999999999999998877
Q ss_pred EEecCC----ceEEEEEEeccccccccccEEEE
Q psy7340 377 MVVEQH----PTLLNVTLHTSKWLALWTSDLEV 405 (440)
Q Consensus 377 tVt~~~----~t~lnI~L~~~~~~L~l~evVvv 405 (440)
.+..+. ...++|.|.++...+ .+||+.
T Consensus 360 ~v~~~~~~~~~~~~~~~L~~~~~~l--~evv~~ 390 (426)
T 1uwy_A 360 IIPEKSQNFSALKKDILLPFQGQLD--SIPVSN 390 (426)
T ss_dssp EECSSCSSSSCEECCEECSSCC-----------
T ss_pred EEeCCCccccceEEEEEEecCCccc--cceeec
Confidence 775544 457899999888875 465444
No 12
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=99.41 E-value=2.3e-13 Score=141.17 Aligned_cols=101 Identities=30% Similarity=0.510 Sum_probs=77.9
Q ss_pred hhhhHHHhhhcceeEEEEEECCCCCcccccEEEEecc-ceeeeeCCCccEEEEecCCceEEEEEEecc-ceeEEEEEEec
Q psy7340 303 VKSLVKFLAEAHRGVQGFVTDDLGNPVEKASLKIKGR-DVGFQTTKYGEFWRILLPGIYKLEVYADGY-VPREIDFMVVE 380 (440)
Q Consensus 303 v~~l~~~~~q~~~~IsG~V~D~~GePL~GAtV~IkGt-~~gt~TD~~G~F~l~lp~G~ytL~VS~IGY-~~q~itItVt~ 380 (440)
..++..++++.+.+|+|+|+|++|+||+||+|.|+|+ +.+++||.+|.|++.++||.|+|+|+++|| .+....++|..
T Consensus 325 ~~~ll~~~~~~~~gv~G~V~D~~G~pi~gA~V~v~g~~~~~~~Td~~G~y~~~l~pG~Y~l~vs~~Gy~~~~~~~v~v~~ 404 (435)
T 3mn8_A 325 KASLLQLLRQAHIGIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFGYQTSAPQQVRVTN 404 (435)
T ss_dssp HHHHHHHHHGGGSSEEEEEECSSSCBCTTCEEEETTCTTSCEECCTTCEEEECCCSEEEEEEEEBTTBCCCCCEEEEECC
T ss_pred hhhhccccccccceeEEEEECCCCCccCceEEEEecccccceEeCCCCeEEEecCCCcEEEEEEEcccccceEEEEEEec
Confidence 4445666777788899999999999999999999995 899999999999888999999999999999 66666677765
Q ss_pred CC--ceEEEEEEeccccccccccEEEE
Q psy7340 381 QH--PTLLNVTLHTSKWLALWTSDLEV 405 (440)
Q Consensus 381 ~~--~t~lnI~L~~~~~~L~l~evVvv 405 (440)
+. ...++|.|+++...| ++|+|+
T Consensus 405 ~~~~~~~~~~~L~~~~~~L--~~v~~~ 429 (435)
T 3mn8_A 405 DNQEALRLDFKLAPVETNF--DGISSF 429 (435)
T ss_dssp CSSSCEECCEECCBC------------
T ss_pred CCcceeEEEEEEeecCCCC--CeeEec
Confidence 44 347899999998885 565544
No 13
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=99.36 E-value=7.2e-13 Score=137.16 Aligned_cols=104 Identities=26% Similarity=0.478 Sum_probs=81.4
Q ss_pred ccchhhhHHHhhhcceeEEEEEECCCCCcccccEEEEeccceeeeeCCCccEEEEecCCceEEEEEEeccceeEEEEEE-
Q psy7340 300 KSSVKSLVKFLAEAHRGVQGFVTDDLGNPVEKASLKIKGRDVGFQTTKYGEFWRILLPGIYKLEVYADGYVPREIDFMV- 378 (440)
Q Consensus 300 KSsv~~l~~~~~q~~~~IsG~V~D~~GePL~GAtV~IkGt~~gt~TD~~G~F~l~lp~G~ytL~VS~IGY~~q~itItV- 378 (440)
..+..+++.++.+++.+|+|+|+|.+|+||+||+|.|+|++.+++||.+|.|++.+++|.|+|+|+++||.+....+.|
T Consensus 306 ~~n~~all~~leqv~~~i~G~V~D~~g~pi~gA~V~v~~~~~~~~Td~~G~y~~~l~~G~Y~l~vs~~Gy~~~~~~v~v~ 385 (439)
T 2nsm_A 306 LGNKEALIQFLEQVHQGIKGMVLDQNYNNLANAVISVSGINHDVTSGDHGDYFRLLLPGIYTVSATAPGYDPETVTVTVG 385 (439)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEECTTSCBCTTCEEEETTEEEEEECCTTSEEEECCCSEEEEEEEECTTEECEEEEEEEC
T ss_pred HhhHHHHHHHhhccccceEEEEEcCCCCCccceEEEEEcccceeEECCCCeEEEccCCeeEEEEEEecCceeEEEEEEEe
Confidence 4456678888888888999999999999999999999999999999999999888999999999999999999888877
Q ss_pred ecCCceEEEEEEeccccccccccEEEEC
Q psy7340 379 VEQHPTLLNVTLHTSKWLALWTSDLEVG 406 (440)
Q Consensus 379 t~~~~t~lnI~L~~~~~~L~l~evVvv~ 406 (440)
..+.... +|.|.++...| +||+|..
T Consensus 386 ~~~~~~~-~~~L~~~~~~L--~eVvV~~ 410 (439)
T 2nsm_A 386 PAEPTLV-NFHLKRSIPQV--SPVRRAP 410 (439)
T ss_dssp SSSCEEC-CEECEEC-------------
T ss_pred cCCcceE-eEEEccCCCcc--ccEEEec
Confidence 3333334 99999888775 6765543
No 14
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=99.31 E-value=2.9e-12 Score=130.09 Aligned_cols=94 Identities=31% Similarity=0.534 Sum_probs=82.0
Q ss_pred hccchhhhHHHhhhcceeEEEEEECC-CCCcccccEEEEeccceeeeeCCCccEEEEecCCceEEEEEEeccceeEEEEE
Q psy7340 299 KKSSVKSLVKFLAEAHRGVQGFVTDD-LGNPVEKASLKIKGRDVGFQTTKYGEFWRILLPGIYKLEVYADGYVPREIDFM 377 (440)
Q Consensus 299 kKSsv~~l~~~~~q~~~~IsG~V~D~-~GePL~GAtV~IkGt~~gt~TD~~G~F~l~lp~G~ytL~VS~IGY~~q~itIt 377 (440)
|+.+..+++.++.+++.+|+|+|+|+ +|+||+||+|.|++++.+++||.+|.|++.+++|.|+|.|+++||.+....+.
T Consensus 285 w~~n~~~l~~~~~~v~~~i~G~V~D~~~g~pi~~A~V~v~~~~~~~~Td~~G~y~~~l~~G~Y~l~vs~~Gy~~~~~~v~ 364 (380)
T 1h8l_A 285 WEQNRRSLLQFIKQVHRGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVTKTVE 364 (380)
T ss_dssp HHHHHHHHHHHHHGGGCEEEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEECCCSEEEEEEEECTTBCCEEEEEE
T ss_pred HHHHHHHHhhhhhhccccceEEEEeCCCCCccCceEEEEecCcceeEECCCEEEEEecCCCcEEEEEEEcCccceEEEEE
Confidence 34456678888999999999999996 99999999999999999999999999988899999999999999999988887
Q ss_pred EecCCceEEEEEEec
Q psy7340 378 VVEQHPTLLNVTLHT 392 (440)
Q Consensus 378 Vt~~~~t~lnI~L~~ 392 (440)
+..+....++|.|.+
T Consensus 365 v~~~~~~~~~~~L~~ 379 (380)
T 1h8l_A 365 VDSKGGVQVNFTLSR 379 (380)
T ss_dssp ECSSCEEECCEEECB
T ss_pred EcCCCeEEEEEEecc
Confidence 765555567888765
No 15
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=97.47 E-value=0.00033 Score=74.16 Aligned_cols=87 Identities=18% Similarity=0.215 Sum_probs=67.8
Q ss_pred cceeEEEEEECCCCCcccccEEEE---eccceeeeeCCCccEEE-EecCCceEEEEEEeccceeEEEEEEecCCceEEEE
Q psy7340 313 AHRGVQGFVTDDLGNPVEKASLKI---KGRDVGFQTTKYGEFWR-ILLPGIYKLEVYADGYVPREIDFMVVEQHPTLLNV 388 (440)
Q Consensus 313 ~~~~IsG~V~D~~GePL~GAtV~I---kGt~~gt~TD~~G~F~l-~lp~G~ytL~VS~IGY~~q~itItVt~~~~t~lnI 388 (440)
...+|+|+|. |.|...+.|.. ++....+.||.+|.|.+ +++||+|+|.+...||...+..|+|.++....+++
T Consensus 256 ~RGtVsG~V~---G~~~~~~avv~~~~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~~~~VtV~aG~t~~l~i 332 (508)
T 1nkg_A 256 GRGKVAGTAS---GADSSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVTVSAGSTTTKNI 332 (508)
T ss_dssp GCBEEEEEEE---SSCTTSCEEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEEECTTCEEECCE
T ss_pred cccEEEEEEc---CccCCceEEEEEcCCCceeEEEECCCCcEEeCCcCCceEEEEEEECceEEEEeEEEEcCCCeeEeee
Confidence 3457999999 66644445555 67778899999999987 58999999999999998888889998777667788
Q ss_pred EEeccccccccccEEEEC
Q psy7340 389 TLHTSKWLALWTSDLEVG 406 (440)
Q Consensus 389 ~L~~~~~~L~l~evVvv~ 406 (440)
++.+... +++|.++
T Consensus 333 ~~~~~~g----~~iW~IG 346 (508)
T 1nkg_A 333 SGSVKTG----TTIFKIG 346 (508)
T ss_dssp ECCCCCC----SEEEEEE
T ss_pred EEecCCC----CeeEEee
Confidence 8876521 3567775
No 16
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=96.61 E-value=0.013 Score=47.74 Aligned_cols=72 Identities=22% Similarity=0.141 Sum_probs=50.3
Q ss_pred EEEEEECCCCCcccccEEEEec-------cceeeeeCCCccEEEEecCCceEEEEEEeccceeEEEEEEecCCceEEEEE
Q psy7340 317 VQGFVTDDLGNPVEKASLKIKG-------RDVGFQTTKYGEFWRILLPGIYKLEVYADGYVPREIDFMVVEQHPTLLNVT 389 (440)
Q Consensus 317 IsG~V~D~~GePL~GAtV~IkG-------t~~gt~TD~~G~F~l~lp~G~ytL~VS~IGY~~q~itItVt~~~~t~lnI~ 389 (440)
++-+|+|.+|+|++||.|.++= +.....||.+|.|++..-.|+..+..+.-|+--.. .++ .+....+++.
T Consensus 3 ~~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~G~Gd~~v~A~k~G~~g~a-~l~--~~~~~~~~i~ 79 (82)
T 3e8v_A 3 GSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYS-KLS--FGKDNELKIT 79 (82)
T ss_dssp EEEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEECCSEEEEEEEEETTEEEEE-EEE--ETTBCEEEEE
T ss_pred EEEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEEcCCceEEEeccCCEEEEE-Eec--cCCCceEEEE
Confidence 5667999999999999998863 23446999999998877677777777766643322 122 2444556666
Q ss_pred Ee
Q psy7340 390 LH 391 (440)
Q Consensus 390 L~ 391 (440)
|.
T Consensus 80 L~ 81 (82)
T 3e8v_A 80 LD 81 (82)
T ss_dssp CC
T ss_pred eC
Confidence 54
No 17
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=96.15 E-value=0.013 Score=58.47 Aligned_cols=64 Identities=27% Similarity=0.290 Sum_probs=49.1
Q ss_pred ceeEEEEEECCCCCcccccEEEEeccc------------------eeeeeCCCccEEE-EecCCceE-------------
Q psy7340 314 HRGVQGFVTDDLGNPVEKASLKIKGRD------------------VGFQTTKYGEFWR-ILLPGIYK------------- 361 (440)
Q Consensus 314 ~~~IsG~V~D~~GePL~GAtV~IkGt~------------------~gt~TD~~G~F~l-~lp~G~yt------------- 361 (440)
...|+|+|+|.+|.||+||.|.|=..+ -...||.+|.|.+ .+.||.|.
T Consensus 136 ~l~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~ 215 (312)
T 2xsu_A 136 TLIIEGTVTDTEGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGCPPEGTTQALLNK 215 (312)
T ss_dssp EEEEEEEEEETTSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEECCTTSHHHHHHHH
T ss_pred eEEEEEEEECCCCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCcccCCCCCcHHHHHHH
Confidence 357999999999999999999994211 1368999999965 58899887
Q ss_pred ------------EEEEEeccceeEEEEE
Q psy7340 362 ------------LEVYADGYVPREIDFM 377 (440)
Q Consensus 362 ------------L~VS~IGY~~q~itIt 377 (440)
+.|+.-||......+-
T Consensus 216 ~grh~~RpaHIH~~V~a~G~~~L~Tqly 243 (312)
T 2xsu_A 216 LGRHGNRPSHVHYFVSAPGYRKLTTQFN 243 (312)
T ss_dssp TTCCCEECCEEEEEEECTTBCCEEEEEE
T ss_pred hhccCCCCceEEEEEEcCCccceEEEEe
Confidence 6777788875544443
No 18
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=95.95 E-value=0.0066 Score=60.73 Aligned_cols=61 Identities=21% Similarity=0.229 Sum_probs=52.0
Q ss_pred eeEEEEEECC-------CCCcccccEEEEeccceeeeeCCCccEEE-EecCCc--eEEEEEEeccceeEEE
Q psy7340 315 RGVQGFVTDD-------LGNPVEKASLKIKGRDVGFQTTKYGEFWR-ILLPGI--YKLEVYADGYVPREID 375 (440)
Q Consensus 315 ~~IsG~V~D~-------~GePL~GAtV~IkGt~~gt~TD~~G~F~l-~lp~G~--ytL~VS~IGY~~q~it 375 (440)
++|+|.|..+ ....-.|++|.+.||...++||.+|.|.+ .+|++. |+|.|+..||.+..++
T Consensus 158 ~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g~l~~~i~ 228 (321)
T 3kcp_A 158 YKVSGYILPDFSFDATVAPLVKAGFKVEIVGTELYAVTDANGYFEITGVPANASGYTLKISRATYLDRVIA 228 (321)
T ss_dssp EEEEEEEEESSCCCTTTHHHHHSCCEEEETTSSCEEECCTTSEEEEEEECCEEEEEEEEEECTEECCEEEE
T ss_pred ceEEEEEccccccccccchhccCCcEEEEEeccceeEECCCceEEEeccCCCCccEEEEEeecCceeeeee
Confidence 5799999753 12345789999999999999999999976 699987 9999999999998876
No 19
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=95.56 E-value=0.033 Score=54.09 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=37.7
Q ss_pred eeEEEEEECCCCCcccccEEEEeccc-----------------e-eeeeCCCccEEE-EecCCceE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRD-----------------V-GFQTTKYGEFWR-ILLPGIYK 361 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~-----------------~-gt~TD~~G~F~l-~lp~G~yt 361 (440)
..|+|+|+|.+|.||+||.|.|=-.+ . ...||.+|.|.+ .+.||.|.
T Consensus 103 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~ 168 (254)
T 2boy_A 103 LIFRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYE 168 (254)
T ss_dssp EEEEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred EEEEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCcccc
Confidence 47999999999999999999994211 1 368999999965 58888774
No 20
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=95.54 E-value=0.037 Score=55.21 Aligned_cols=47 Identities=23% Similarity=0.314 Sum_probs=37.6
Q ss_pred eeEEEEEECCCCCcccccEEEEeccc-----------------e-eeeeCCCccEEE-EecCCceE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRD-----------------V-GFQTTKYGEFWR-ILLPGIYK 361 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~-----------------~-gt~TD~~G~F~l-~lp~G~yt 361 (440)
..|+|+|+|.+|.||+||.|.|=-.+ . ...||.+|.|.+ .+.||.|.
T Consensus 133 l~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~ 198 (311)
T 2azq_A 133 MFLQGQVFDANGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYG 198 (311)
T ss_dssp EEEEEEEECSSSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEE
T ss_pred EEEEEEEEcCCCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcC
Confidence 46999999999999999999983111 1 368999999965 58888876
No 21
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=95.14 E-value=0.05 Score=53.03 Aligned_cols=46 Identities=22% Similarity=0.284 Sum_probs=35.9
Q ss_pred eeEEEEEECCCCCcccccEEEEe-----cc------------ce-eeeeCCCccEEE-EecCCce
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIK-----GR------------DV-GFQTTKYGEFWR-ILLPGIY 360 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~Ik-----Gt------------~~-gt~TD~~G~F~l-~lp~G~y 360 (440)
..|+|+|+|.+|+||+||.|-|= |. .. ...||.+|.|.+ .+.|+.|
T Consensus 100 l~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Y 164 (260)
T 3th1_A 100 LIIRGTVRSDTGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPY 164 (260)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCE
T ss_pred EEEEEEEECCCCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCC
Confidence 46999999999999999999882 10 12 358999999954 5777666
No 22
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=94.49 E-value=0.092 Score=52.39 Aligned_cols=48 Identities=23% Similarity=0.356 Sum_probs=37.6
Q ss_pred ceeEEEEEECCCCCcccccEEEEeccc-------------------e-eeeeCCCccEEE-EecCCceE
Q psy7340 314 HRGVQGFVTDDLGNPVEKASLKIKGRD-------------------V-GFQTTKYGEFWR-ILLPGIYK 361 (440)
Q Consensus 314 ~~~IsG~V~D~~GePL~GAtV~IkGt~-------------------~-gt~TD~~G~F~l-~lp~G~yt 361 (440)
...|+|+|+|.+|.||+||.|-|=-.+ . ...||.+|.|.+ .+.||.|.
T Consensus 133 ~l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp 201 (311)
T 1dmh_A 133 TLILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYG 201 (311)
T ss_dssp EEEEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eEEEEEEEEcCCCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCccc
Confidence 357999999999999999999883110 1 368999999965 58888774
No 23
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=94.34 E-value=0.12 Score=51.26 Aligned_cols=47 Identities=30% Similarity=0.373 Sum_probs=37.4
Q ss_pred eeEEEEEECCCCCcccccEEEEeccc-----------------eeeeeCCCccEEE-EecCCceE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRD-----------------VGFQTTKYGEFWR-ILLPGIYK 361 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~-----------------~gt~TD~~G~F~l-~lp~G~yt 361 (440)
..|+|+|+|.+|+||+||.|-|=-.+ -...||.+|.|.+ .+.||.|.
T Consensus 134 l~v~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp 198 (293)
T 1tmx_A 134 CWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYP 198 (293)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEE
T ss_pred EEEEEEEECCCCCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCccc
Confidence 46999999999999999999983211 1368999999965 58888774
No 24
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=93.96 E-value=0.17 Score=49.22 Aligned_cols=47 Identities=19% Similarity=0.192 Sum_probs=36.6
Q ss_pred eeEEEEEECCCCCcccccEEEEecc-----------------c-e-eeeeCCCccEEE-EecCCceE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGR-----------------D-V-GFQTTKYGEFWR-ILLPGIYK 361 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt-----------------~-~-gt~TD~~G~F~l-~lp~G~yt 361 (440)
..|+|+|+|.+|+||+||.|-|=-. + . ...||.+|.|.+ .+.||.|-
T Consensus 104 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp 170 (257)
T 3o5u_A 104 MRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYE 170 (257)
T ss_dssp EEEEEEEECTTCCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEE
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcC
Confidence 5699999999999999999988211 0 1 258999999965 57787763
No 25
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=93.90 E-value=0.13 Score=50.92 Aligned_cols=47 Identities=28% Similarity=0.254 Sum_probs=37.2
Q ss_pred eeEEEEEECCCCCcccccEEEEecc-----------------ce-eeeeCCCccEEE-EecCCceE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGR-----------------DV-GFQTTKYGEFWR-ILLPGIYK 361 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt-----------------~~-gt~TD~~G~F~l-~lp~G~yt 361 (440)
..|+|+|+|.+|+||+||.|.|=-. -. ...||.+|.|.+ .+.||.|.
T Consensus 130 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp 195 (290)
T 3n9t_A 130 ALVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYP 195 (290)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcC
Confidence 5699999999999999999988311 02 258999999965 57888775
No 26
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=93.56 E-value=0.22 Score=49.04 Aligned_cols=48 Identities=23% Similarity=0.223 Sum_probs=37.3
Q ss_pred ceeEEEEEECCCCCcccccEEEEeccc------------------eeeeeCCCccEEE-EecCCceE
Q psy7340 314 HRGVQGFVTDDLGNPVEKASLKIKGRD------------------VGFQTTKYGEFWR-ILLPGIYK 361 (440)
Q Consensus 314 ~~~IsG~V~D~~GePL~GAtV~IkGt~------------------~gt~TD~~G~F~l-~lp~G~yt 361 (440)
...|+|+|+|.+|+||+||.|-|=-.+ -...||.+|.|.+ .+.||.|-
T Consensus 131 pl~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp 197 (280)
T 3hhy_A 131 PLVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQ 197 (280)
T ss_dssp EEEEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred EEEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcC
Confidence 457999999999999999999883110 1358999999965 57887764
No 27
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=93.53 E-value=0.14 Score=48.30 Aligned_cols=47 Identities=23% Similarity=0.275 Sum_probs=36.3
Q ss_pred eeEEEEEECCCCCcccccEEEEe-----c--------------cc---e-eeee-CCCccEEE-EecCCceE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIK-----G--------------RD---V-GFQT-TKYGEFWR-ILLPGIYK 361 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~Ik-----G--------------t~---~-gt~T-D~~G~F~l-~lp~G~yt 361 (440)
..|+|+|+|.+|.||+||.|.|= | .+ . ...| |.+|.|.+ .+.||.|.
T Consensus 53 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~yp 124 (209)
T 2bum_A 53 IRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVP 124 (209)
T ss_dssp EEEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCB
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCccc
Confidence 57999999999999999999983 1 00 1 2577 99999964 57787764
No 28
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=93.21 E-value=0.15 Score=49.19 Aligned_cols=48 Identities=27% Similarity=0.437 Sum_probs=37.8
Q ss_pred eeEEEEEECCCCCcccccEEEEecc-------------------c----eeeeeCCCccEEE-EecCCceEE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGR-------------------D----VGFQTTKYGEFWR-ILLPGIYKL 362 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt-------------------~----~gt~TD~~G~F~l-~lp~G~ytL 362 (440)
..|+|+|+|.+|.||+||.|.|=-. + -...||.+|.|.+ .+.||.|.+
T Consensus 79 i~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 150 (241)
T 2bum_B 79 VIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW 150 (241)
T ss_dssp EEEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCcccc
Confidence 4699999999999999999988311 0 1258899999965 588998854
No 29
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=92.13 E-value=0.19 Score=52.12 Aligned_cols=57 Identities=23% Similarity=0.358 Sum_probs=43.2
Q ss_pred eeEEEEEE---------CCCCCcccccEEEEeccc----eeeeeCCCccEEE-EecCCceEEEEEEe-ccce
Q psy7340 315 RGVQGFVT---------DDLGNPVEKASLKIKGRD----VGFQTTKYGEFWR-ILLPGIYKLEVYAD-GYVP 371 (440)
Q Consensus 315 ~~IsG~V~---------D~~GePL~GAtV~IkGt~----~gt~TD~~G~F~l-~lp~G~ytL~VS~I-GY~~ 371 (440)
..|.|.|. |+...||+||.|.+...+ ..+.||.+|.|.+ .+++|.|++.+... ||..
T Consensus 306 ~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~Gy~~ 377 (429)
T 3irp_X 306 GGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIP 377 (429)
T ss_dssp EEEEEEEEECTTSSSSSCCSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCTTEEE
T ss_pred EEEccEEEEeCCCCCCcCcCCCCcCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCCCCEE
Confidence 35788884 334569999999987432 4578999999965 58999999998764 6654
No 30
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=91.51 E-value=0.26 Score=47.40 Aligned_cols=48 Identities=29% Similarity=0.347 Sum_probs=37.4
Q ss_pred eeEEEEEECCCCCcccccEEEEe-----cc-----------------ce-eeeeCCCccEEE-EecCCceEE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIK-----GR-----------------DV-GFQTTKYGEFWR-ILLPGIYKL 362 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~Ik-----Gt-----------------~~-gt~TD~~G~F~l-~lp~G~ytL 362 (440)
..|+|+|+|.+|+||+||.|-|= |. .. ...||.+|.|.+ .+.||.|.+
T Consensus 78 i~l~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 149 (238)
T 3t63_M 78 IIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW 149 (238)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence 56999999999999999999882 10 01 258999999965 588888754
No 31
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=91.36 E-value=0.27 Score=46.04 Aligned_cols=48 Identities=25% Similarity=0.205 Sum_probs=36.9
Q ss_pred eeEEEEEECCCCCcccccEEEEecc-----------------ce-eeeeCCC-ccEEE-EecCCceEE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGR-----------------DV-GFQTTKY-GEFWR-ILLPGIYKL 362 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt-----------------~~-gt~TD~~-G~F~l-~lp~G~ytL 362 (440)
..|+|+|+|.+|+||+||.|-|=-. .. ...||.+ |.|.+ .+.||.|..
T Consensus 49 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~ 116 (200)
T 3t63_A 49 ILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNN 116 (200)
T ss_dssp EEEEECEECTTSCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEEC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCC
Confidence 5699999999999999999988311 01 2589998 99965 577887653
No 32
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=87.56 E-value=1.8 Score=41.85 Aligned_cols=54 Identities=28% Similarity=0.337 Sum_probs=43.4
Q ss_pred CCCCcccccEEEEeccc---eeeeeCCCccEEE-EecCCceEEEEEEeccceeEEEEEE
Q psy7340 324 DLGNPVEKASLKIKGRD---VGFQTTKYGEFWR-ILLPGIYKLEVYADGYVPREIDFMV 378 (440)
Q Consensus 324 ~~GePL~GAtV~IkGt~---~gt~TD~~G~F~l-~lp~G~ytL~VS~IGY~~q~itItV 378 (440)
.++..++++.|.+.... ..+.||..|.|++ .+++|.|+|.|.+.|| +...++.+
T Consensus 205 a~~~~~~~~~vpl~~~~~~va~~~~d~~G~f~~~~l~~G~y~v~v~a~g~-p~~~~~~~ 262 (274)
T 1ti6_B 205 VQGDCFEGAKVVLKSGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGK-SYSDTVVI 262 (274)
T ss_dssp ETTEECTTCEEEEEETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTE-EEEEEEEE
T ss_pred cccccccCCEEEEEcCCcEEEEEeecCcCcEEEeccCCcceEEEEecCCC-CccceeEE
Confidence 56678888888887322 2468999999975 5899999999999999 98887766
No 33
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=85.83 E-value=3 Score=43.68 Aligned_cols=63 Identities=19% Similarity=0.187 Sum_probs=47.0
Q ss_pred eeEEEEEECCCCCcccccEEEEeccc------eeeeeCCCccEEEEe---cCCceEEEEEEeccceeEEEEEE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRD------VGFQTTKYGEFWRIL---LPGIYKLEVYADGYVPREIDFMV 378 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~------~gt~TD~~G~F~l~l---p~G~ytL~VS~IGY~~q~itItV 378 (440)
..++-+|+|.+|+|++|..|.+.-.. ....||.+|.+.+.+ .+|.|++.++.-|- .....+.+
T Consensus 28 ~~ltatV~D~~Gnpv~g~~Vtf~~~~g~~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~-s~s~~v~f 99 (492)
T 1cwv_A 28 ITVEFTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ-RQSVDTHF 99 (492)
T ss_dssp EEEEEEEECTTSCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTE-EEEEEEEE
T ss_pred EEEEEEEEcCCCCCCCCCEEEEEECCCccccccceeeCCCceEEEEEEcCcceEEEEEEEECCc-cceeEEEE
Confidence 46899999999999999999886321 235789999997654 57999999988763 33333433
No 34
>3g3l_A Putative uncharacterized membrane-associated PROT; YP_211325.1, putative membrane-associated protein of unknown function; 2.20A {Bacteroides fragilis nctc 9343}
Probab=82.83 E-value=1.4 Score=41.95 Aligned_cols=61 Identities=25% Similarity=0.328 Sum_probs=50.5
Q ss_pred cceeEEEEEEC-CCCCcccccEEEEeccceeeeeCCCccEEEEecCCceEEEEEEeccceeEEEEE
Q psy7340 313 AHRGVQGFVTD-DLGNPVEKASLKIKGRDVGFQTTKYGEFWRILLPGIYKLEVYADGYVPREIDFM 377 (440)
Q Consensus 313 ~~~~IsG~V~D-~~GePL~GAtV~IkGt~~gt~TD~~G~F~l~lp~G~ytL~VS~IGY~~q~itIt 377 (440)
..+-|-|+|+| .+|+.|.-|+|.+.|+..+..-|..|+|. ...|.+.|++-||-+...++-
T Consensus 13 AKYyIaGtiTdatTGq~LttAtVTlgg~sVt~~fN~~v~yk----aegyslvVsa~gYy~v~kqVY 74 (327)
T 3g3l_A 13 AKYYIAGTITDATTGQELTTAKVTLGDKSVTSSFNEQVNYK----AEGYALVVSADGYYPVKRQVY 74 (327)
T ss_dssp CEEEEEEEEEETTTCCBCTTCEEEETTEEECSEEEEEECCC----TTCEEEEEECTTBCCEEEEEC
T ss_pred ceEEEEEEeeeccccceEEEEEEEECCeEEeeeccceeeEe----ecCceEEEEecCceeeEEEEE
Confidence 34569999999 48999999999999988877778888883 344899999999999877653
No 35
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=82.66 E-value=1.2 Score=38.37 Aligned_cols=54 Identities=19% Similarity=0.284 Sum_probs=40.6
Q ss_pred eEEEEEEC-CCCCcccccEEEEecc---ceeeeeCCCccEEE----EecCCceEEEEEEecc
Q psy7340 316 GVQGFVTD-DLGNPVEKASLKIKGR---DVGFQTTKYGEFWR----ILLPGIYKLEVYADGY 369 (440)
Q Consensus 316 ~IsG~V~D-~~GePL~GAtV~IkGt---~~gt~TD~~G~F~l----~lp~G~ytL~VS~IGY 369 (440)
.|+-.|+| ..|.|.+|+.|.+... -....||.||.... .+.+|.|.|.|..-.|
T Consensus 11 ~lstHVLDt~~G~PAagv~V~L~~~~~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~Y 72 (116)
T 3qva_A 11 TLSTHILDISTGTPAEGVTVSLSREGETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGAW 72 (116)
T ss_dssp CEEEEEEETTTTEECTTCEEEEEETTEEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHHH
T ss_pred CeeeEEeecCCCcCCCCCEEEEEEccEeEEEeccCCCCCccccccccCCCceEEEEEeHHHH
Confidence 48999999 5999999999998642 23468999999732 2467899998854333
No 36
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=80.67 E-value=4 Score=45.95 Aligned_cols=65 Identities=25% Similarity=0.245 Sum_probs=48.0
Q ss_pred eEEEEEECCCCCcccccEEEEeccc----ee-eeeCCCccEEE-EecCCceEEEEEE--eccceeE--EEEEEec
Q psy7340 316 GVQGFVTDDLGNPVEKASLKIKGRD----VG-FQTTKYGEFWR-ILLPGIYKLEVYA--DGYVPRE--IDFMVVE 380 (440)
Q Consensus 316 ~IsG~V~D~~GePL~GAtV~IkGt~----~g-t~TD~~G~F~l-~lp~G~ytL~VS~--IGY~~q~--itItVt~ 380 (440)
.|+-+-+|++|.||+||...+.... .. .+||.+|.+.+ .+++|.|+|.=.. .||.... ..++|..
T Consensus 49 ~~~i~K~d~~~~~L~GA~F~l~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~~~~~~v~v~~ 123 (893)
T 2ww8_A 49 KVVIKETGEGGALLGDAVFELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEK 123 (893)
T ss_dssp EEEEEEECSTTCBCCCCEEEEEETTTCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEECT
T ss_pred EEEEEEECCCCCccCCCEEEEEECCCCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecCCccEEEEECC
Confidence 4566668999999999999997643 22 57899999965 6999999887554 6887643 3455543
No 37
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=80.52 E-value=9.5 Score=36.85 Aligned_cols=51 Identities=20% Similarity=0.311 Sum_probs=38.5
Q ss_pred eeEEEEEECC-CCCccc------ccEEEEecc-------ce-eeeeCCCccEE-EEecCCceEEEEE
Q psy7340 315 RGVQGFVTDD-LGNPVE------KASLKIKGR-------DV-GFQTTKYGEFW-RILLPGIYKLEVY 365 (440)
Q Consensus 315 ~~IsG~V~D~-~GePL~------GAtV~IkGt-------~~-gt~TD~~G~F~-l~lp~G~ytL~VS 365 (440)
.+++|+|+|. +|+||. |+.|.+... .. ......||.|. ..+-.|+|.|++.
T Consensus 10 s~l~G~ivd~~tGE~i~~~~g~~gv~i~l~E~g~~~~~~~~~~~~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 10 ETIWGEVVDEATGKRVLTDQGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp EEEEEEEEETTTCCBCCCCSSTTSCEEEEEECCSSCCBCCSCCEECCTTSEEEEEEECSEEEEEEEE
T ss_pred ceeEEEEEECCCCCEeeeccCCCceEEEEEecccccCCCccCCEEECCCCceeeeeEEcceeEEEeC
Confidence 4699999994 999885 356666432 22 44678999997 6678899999987
No 38
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=78.51 E-value=4.2 Score=42.49 Aligned_cols=56 Identities=20% Similarity=0.319 Sum_probs=43.2
Q ss_pred eeEEEEEECCCCCcccccEEEEecc--cee-eeeCCCccEEEEe---cCCceEEEEEEeccc
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGR--DVG-FQTTKYGEFWRIL---LPGIYKLEVYADGYV 370 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt--~~g-t~TD~~G~F~l~l---p~G~ytL~VS~IGY~ 370 (440)
..++-+|+|.+|+||+|..|.+.-. ... ..+|.+|.+.+.+ .+|.|++.++.-|..
T Consensus 126 ~tltatv~Da~GNpv~g~~Vtf~~~~g~~~~~Ttd~~G~at~tlts~~aG~~tVtA~v~g~~ 187 (492)
T 1cwv_A 126 STITLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAA 187 (492)
T ss_dssp EEEEEECBBTTSCBCCSCCEEEEESSSEECCCEECSSSEEEEEEECSSCEEEEEEEEETTEE
T ss_pred EEEEEEEEcCCCCCcCCcEEEEEECCCceeeeEecCCcEEEEEEEccCceEEEEEEEECCcc
Confidence 4688999999999999999988633 222 3458999996543 578999999887654
No 39
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=77.32 E-value=2.5 Score=42.21 Aligned_cols=50 Identities=22% Similarity=0.199 Sum_probs=38.5
Q ss_pred ECCCCCcccccEEEEeccc-----eeeeeCCCccEEE-EecCCceEEEEEE--eccce
Q psy7340 322 TDDLGNPVEKASLKIKGRD-----VGFQTTKYGEFWR-ILLPGIYKLEVYA--DGYVP 371 (440)
Q Consensus 322 ~D~~GePL~GAtV~IkGt~-----~gt~TD~~G~F~l-~lp~G~ytL~VS~--IGY~~ 371 (440)
+|++|.||+||...+...+ ...+||.+|.+.+ .+++|.|.|.=.. -||..
T Consensus 15 ~d~~~~~L~GA~F~l~~~~g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~aP~GY~~ 72 (355)
T 3kpt_A 15 TGVNEKAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVI 72 (355)
T ss_dssp ECGGGCBCCSCEEEEEETTSCEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCC
T ss_pred ECCCCCCcCCcEEEEEECCCCEEEEEEEECCCCeEEECCcCCceEEEEEEeCCCCeEc
Confidence 6888999999999997532 2357899999965 6899999876432 57875
No 40
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=77.21 E-value=7.1 Score=36.54 Aligned_cols=50 Identities=18% Similarity=0.200 Sum_probs=37.1
Q ss_pred eeEEEEEECCCCCccc----ccEEEEec------cceeeeeCCCccEEEEecCCceEEEEE
Q psy7340 315 RGVQGFVTDDLGNPVE----KASLKIKG------RDVGFQTTKYGEFWRILLPGIYKLEVY 365 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~----GAtV~IkG------t~~gt~TD~~G~F~l~lp~G~ytL~VS 365 (440)
..++|+|+ .+|+||+ |+.|.+.. .........||.|...+-.|+|.|+..
T Consensus 8 a~l~G~iv-~tgE~i~~~~~gv~i~l~e~g~~~~~~~~~~v~qDGtf~~~lF~G~Yki~~~ 67 (202)
T 4fxt_A 8 ATLTGKAI-YDGEAVGVRSGSSEFALFQDGYALKGSIPVYIAQDGSYSVSLFNGDYKLVRM 67 (202)
T ss_dssp EEEEEEEE-ETTEECBCCTTTEEEEEECCC----CCEEEEBCTTSEEEEEEESEEEEEEEE
T ss_pred ceEEEEEE-ECCCEeeecCCceEEEEEEcccCCCCCeeEEEcCCCcEEEEEEcceeEEEEC
Confidence 36899999 5788775 45565542 234567789999986677899999975
No 41
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=76.13 E-value=1.9 Score=40.54 Aligned_cols=43 Identities=21% Similarity=0.175 Sum_probs=32.8
Q ss_pred ECCCCCcccccEEEEeccc--------------------------eeeeeCCCccEEE-EecCCceEEEE
Q psy7340 322 TDDLGNPVEKASLKIKGRD--------------------------VGFQTTKYGEFWR-ILLPGIYKLEV 364 (440)
Q Consensus 322 ~D~~GePL~GAtV~IkGt~--------------------------~gt~TD~~G~F~l-~lp~G~ytL~V 364 (440)
.+++|.||.||...+.... ...+||.+|.+.+ .+++|.|.|.=
T Consensus 25 ~~~~g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~v~E 94 (239)
T 2pz4_A 25 APKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLA 94 (239)
T ss_dssp CCSSCEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEE
T ss_pred cCCCCCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEECCCCCeeEEEEE
Confidence 3567899999999886421 1247999999965 69999998753
No 42
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=71.28 E-value=3.4 Score=35.39 Aligned_cols=54 Identities=15% Similarity=0.226 Sum_probs=39.2
Q ss_pred eEEEEEEC-CCCCcccccEEEEecc-------ceeeeeCCCccEE-E----EecCCceEEEEEEecc
Q psy7340 316 GVQGFVTD-DLGNPVEKASLKIKGR-------DVGFQTTKYGEFW-R----ILLPGIYKLEVYADGY 369 (440)
Q Consensus 316 ~IsG~V~D-~~GePL~GAtV~IkGt-------~~gt~TD~~G~F~-l----~lp~G~ytL~VS~IGY 369 (440)
.|+-.|+| ..|.|.+|+.|.+... -....||.||... + .+.+|.|.|.|..-.|
T Consensus 5 ~lstHVLDt~~G~PAagv~V~L~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 71 (114)
T 2g2n_A 5 ILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDY 71 (114)
T ss_dssp CEEEEEEETTTTEECCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEECHHHH
T ss_pred CeEEEEecCCCcCCCCCCEEEEEEeCCCCcEEEEEEecCCCCccccccCCCCCCceEEEEEEEhhHh
Confidence 48899999 5999999999988531 1246899999972 1 2446888888854333
No 43
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=69.62 E-value=12 Score=35.47 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=37.2
Q ss_pred eeEEEEEECCCCCccc-----ccEEEEec------cceeeeeCCCccEEEEecCCceEEEEE
Q psy7340 315 RGVQGFVTDDLGNPVE-----KASLKIKG------RDVGFQTTKYGEFWRILLPGIYKLEVY 365 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~-----GAtV~IkG------t~~gt~TD~~G~F~l~lp~G~ytL~VS 365 (440)
..++|+|+ .+|+||+ |+.|.+.. .........||.|...+-.|+|.|++.
T Consensus 11 a~l~G~iv-~tGE~i~~~~~~gv~i~l~E~gy~~~~~~~~~v~qDGtf~~~lF~G~Yki~~~ 71 (215)
T 3hn5_A 11 SMLTGRVM-YNGEALQLRGNEAVQLQLYQHGYAKHDPINVYVNQDGMYSANLFDGEYQMITK 71 (215)
T ss_dssp EEEEEEEE-ETTEECCCCCTTSCEEEEESSCGGGCCCEEEEBCTTSEEEEEECSEEEEEEEC
T ss_pred ceEEEEEE-ECCCEeeecCCCceEEEEEEcccCCCCCeeEEEcCCCcEEEEEECceeEEEEe
Confidence 46999999 6788774 36666642 234567789999986677899999986
No 44
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=69.10 E-value=12 Score=32.09 Aligned_cols=54 Identities=22% Similarity=0.327 Sum_probs=36.8
Q ss_pred EEEEEECCCCCcccccEEEEeccc---eeeeeCCCccEEE-EecCCceEEEE-EE-eccce
Q psy7340 317 VQGFVTDDLGNPVEKASLKIKGRD---VGFQTTKYGEFWR-ILLPGIYKLEV-YA-DGYVP 371 (440)
Q Consensus 317 IsG~V~D~~GePL~GAtV~IkGt~---~gt~TD~~G~F~l-~lp~G~ytL~V-S~-IGY~~ 371 (440)
|.-.=+|.+|.||+||...+...+ ....+ .+|.+.+ .+++|.|.|.= .+ -||..
T Consensus 30 v~i~K~D~~g~~L~GA~F~l~~~~g~~v~~~~-sdG~~~~~~L~~G~Y~l~EtkAP~GY~l 89 (121)
T 2x5p_A 30 IKFSKRDIDGKELAGATMELRDSSGKTISTWI-SDGQVKDFYLMPGKYTFVETAAPDGYEV 89 (121)
T ss_dssp EEEEEECTTCCBCCCCEEEEECTTSCEEEEEE-CCSSCEEEEECSEEEEEEEEECCTTCCC
T ss_pred EEEEEECCCCCCcCCCEEEEEECCCCEEEEEE-eCCEEEEcccCCcEEEEEEEeCCCCccc
Confidence 444446888999999999997543 12222 3688854 68999998863 33 57765
No 45
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=68.53 E-value=2.5 Score=36.56 Aligned_cols=54 Identities=22% Similarity=0.297 Sum_probs=40.8
Q ss_pred eEEEEEEC-CCCCcccccEEEEecc----ceeeeeCCCccEE--E----EecCCceEEEEEEecc
Q psy7340 316 GVQGFVTD-DLGNPVEKASLKIKGR----DVGFQTTKYGEFW--R----ILLPGIYKLEVYADGY 369 (440)
Q Consensus 316 ~IsG~V~D-~~GePL~GAtV~IkGt----~~gt~TD~~G~F~--l----~lp~G~ytL~VS~IGY 369 (440)
.|+-.|+| ..|.|.+|+.|.+... -....||.||... + .+.+|.|.|.|..-.|
T Consensus 10 ~lstHVLDt~~G~PAagv~V~L~~~~~~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~tg~Y 74 (121)
T 2h0e_A 10 KLTTHILDLTCGKPAANVKIGLKRLGESIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHAGDY 74 (121)
T ss_dssp EEECCEEETTTTEECTTCEEEEEETTSCCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECHHHH
T ss_pred CeeEEEecCCCcCCCCCCEEEEEECCceEEEEEecCCCCCccCCcCCCCCcCceEEEEEEEhHHh
Confidence 48889999 5999999999999642 2357999999972 1 2457899998864444
No 46
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=68.09 E-value=6.8 Score=38.37 Aligned_cols=53 Identities=15% Similarity=0.017 Sum_probs=40.7
Q ss_pred eeEEEEEECCCCCcccccEEEEeccc-----eeeeeCCCccEEEEe---cCCceEEEEEEec
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRD-----VGFQTTKYGEFWRIL---LPGIYKLEVYADG 368 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~-----~gt~TD~~G~F~l~l---p~G~ytL~VS~IG 368 (440)
.+++-+|+| +|+||+|..|...-.+ ....||.+|...+.+ .+|.+++..+.-+
T Consensus 21 ~t~tatV~D-~gnpv~g~~V~fs~~~G~l~~~~~~Td~~G~atvtltst~aG~~~VtA~v~~ 81 (282)
T 1f00_I 21 ITYTVKVMK-GDKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSD 81 (282)
T ss_dssp EEEEEEEEE-TTEECTTCEEEEEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETT
T ss_pred EEEEEEEEE-CCcccCCcEEEEEcCCCccccceeEECCCcEEEEEEEcCCceEEEEEEEECC
Confidence 468889999 9999999999886322 346899999996543 5677777777655
No 47
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=67.23 E-value=10 Score=35.43 Aligned_cols=46 Identities=22% Similarity=0.345 Sum_probs=34.5
Q ss_pred CcccccEEEEec---cc----------------eeeeeCCCccEEE-EecCCceEEE-EEE-ecccee
Q psy7340 327 NPVEKASLKIKG---RD----------------VGFQTTKYGEFWR-ILLPGIYKLE-VYA-DGYVPR 372 (440)
Q Consensus 327 ePL~GAtV~IkG---t~----------------~gt~TD~~G~F~l-~lp~G~ytL~-VS~-IGY~~q 372 (440)
.+|+||...+.. .. ...+||.+|.|.+ .+++|.|.|. +.+ -||...
T Consensus 141 ~~L~GA~F~l~~~~g~~~~~~~~g~~~~~~~~~~~~~Td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~ 208 (239)
T 2pz4_A 141 KPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISGLIHGDYVLKEIETQSGYQIG 208 (239)
T ss_dssp EECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEEEEEEEESEEEEEEEEECCTTBCCC
T ss_pred cccCCCEEEEEeCCCCEEEeecccceecccccceEEEECCCCeEEECCCCCceEEEEEEECCCCcCcC
Confidence 799999999964 21 2458999999965 6999999865 443 688754
No 48
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=66.61 E-value=3.8 Score=36.62 Aligned_cols=51 Identities=25% Similarity=0.370 Sum_probs=38.6
Q ss_pred eEEEEEEC-CCCCcccccEEEEecc---c-----eeeeeCCCccEEE-----EecCCceEEEEEE
Q psy7340 316 GVQGFVTD-DLGNPVEKASLKIKGR---D-----VGFQTTKYGEFWR-----ILLPGIYKLEVYA 366 (440)
Q Consensus 316 ~IsG~V~D-~~GePL~GAtV~IkGt---~-----~gt~TD~~G~F~l-----~lp~G~ytL~VS~ 366 (440)
-|+-.|+| .+|.|..|+.|.+... . ....||.||+..- ...+|.|.|.|.-
T Consensus 31 PLTtHVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~t 95 (147)
T 4ank_A 31 PLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDT 95 (147)
T ss_dssp CEEEEEEETTTTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CeEEEEEeCCCCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEH
Confidence 38999999 5999999999988521 1 2468999999731 1356889998863
No 49
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=65.89 E-value=2.5 Score=37.50 Aligned_cols=55 Identities=18% Similarity=0.244 Sum_probs=40.0
Q ss_pred eeEEEEEEC-CCCCcccccEEEEeccc---------eeeeeCCCccEE--E---EecCCceEEEEEEecc
Q psy7340 315 RGVQGFVTD-DLGNPVEKASLKIKGRD---------VGFQTTKYGEFW--R---ILLPGIYKLEVYADGY 369 (440)
Q Consensus 315 ~~IsG~V~D-~~GePL~GAtV~IkGt~---------~gt~TD~~G~F~--l---~lp~G~ytL~VS~IGY 369 (440)
..|+-.|+| ..|.|.+|+.|.+.... ....||.||... + .+.+|.|.|.|..-.|
T Consensus 26 ~~LTtHVLDt~~G~PAagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 95 (138)
T 3iwv_A 26 SPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKY 95 (138)
T ss_dssp CCEECCEEETTTTEECTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEECHHHH
T ss_pred CCceEEEeecCCccCCCCCEEEEEEECCCCCCcEEEEEEecCCCCCcCCccCcccCCCceEEEEEehHHH
Confidence 358999999 58999999999985311 246899999872 1 1457889888854443
No 50
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=65.24 E-value=10 Score=34.68 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=20.5
Q ss_pred eeeeeCCCccEEE-EecCCceEEEEE
Q psy7340 341 VGFQTTKYGEFWR-ILLPGIYKLEVY 365 (440)
Q Consensus 341 ~gt~TD~~G~F~l-~lp~G~ytL~VS 365 (440)
..+++|.+|+|.+ ++|+|.|-|...
T Consensus 109 r~t~~D~~G~F~F~~Lp~G~Yyl~a~ 134 (170)
T 1xpn_A 109 REATTDQNGRFDFDHIPNGTYYISSE 134 (170)
T ss_dssp EEEEECSSCEEEECSCCSEEEEEEEE
T ss_pred eEEEecCCCcEEecCCCCccEEEEEE
Confidence 4578999999965 699999988754
No 51
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=63.40 E-value=3.7 Score=35.38 Aligned_cols=53 Identities=21% Similarity=0.283 Sum_probs=39.3
Q ss_pred eEEEEEEC-CCCCcccccEEEEecc---c-----eeeeeCCCccEE--E---EecCCceEEEEEEec
Q psy7340 316 GVQGFVTD-DLGNPVEKASLKIKGR---D-----VGFQTTKYGEFW--R---ILLPGIYKLEVYADG 368 (440)
Q Consensus 316 ~IsG~V~D-~~GePL~GAtV~IkGt---~-----~gt~TD~~G~F~--l---~lp~G~ytL~VS~IG 368 (440)
.|+-.|+| ..|.|.+|+.|.+... . ....||.||... + .+.+|.|.|.|..-.
T Consensus 3 ~lstHVLDt~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~ 69 (119)
T 1oo2_A 3 PLMVKILDAVKGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEFDTKA 69 (119)
T ss_dssp SEEEEEEETTTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEECHHH
T ss_pred ceeEEEecCCCcCCCCCCEEEEEEeCCCCCcEEEEEEecCCCCcccCcCCCCCCCceEEEEEEEhHH
Confidence 37889999 5999999999988531 1 246899999972 1 245789999986433
No 52
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=59.54 E-value=13 Score=39.34 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=38.3
Q ss_pred eEEEEEECCCCCcccccEEEEecc-ceeeeeCCCc--cEEEEecC--CceEEEEEEe
Q psy7340 316 GVQGFVTDDLGNPVEKASLKIKGR-DVGFQTTKYG--EFWRILLP--GIYKLEVYAD 367 (440)
Q Consensus 316 ~IsG~V~D~~GePL~GAtV~IkGt-~~gt~TD~~G--~F~l~lp~--G~ytL~VS~I 367 (440)
.+.-.++|.+|.|++++.|.+... +....||.+| .|.++.+. |.|.|.+++.
T Consensus 349 ~~~v~~~~~dG~p~~~~~v~l~~~~~~~~~t~~~G~~~~~i~~~~~~g~y~l~v~~~ 405 (645)
T 2hr0_A 349 DLMVFVTNPDGSPAYRVPVAVQGEDTVQSLTQGDGVAKLSINTHPSQKPLSITVRTK 405 (645)
T ss_dssp EEEEEEECSSSSBCSCCCEEESSSCCSCCCCCTTSEEEEEEECCSCSSCEEEEEEEC
T ss_pred EEEEEEEcCCCCccCCEEEEEecCcceeeEECCCCcEEEEEECCCCCeEEEEEEEEc
Confidence 466667899999999999988643 3446788888 45555554 7788888763
No 53
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=59.05 E-value=7.5 Score=33.25 Aligned_cols=54 Identities=26% Similarity=0.408 Sum_probs=39.2
Q ss_pred eEEEEEEC-CCCCcccccEEEEecc---c-----eeeeeCCCccEE--E---EecCCceEEEEEEecc
Q psy7340 316 GVQGFVTD-DLGNPVEKASLKIKGR---D-----VGFQTTKYGEFW--R---ILLPGIYKLEVYADGY 369 (440)
Q Consensus 316 ~IsG~V~D-~~GePL~GAtV~IkGt---~-----~gt~TD~~G~F~--l---~lp~G~ytL~VS~IGY 369 (440)
.|+-.|+| ..|.|.+|+.|.+... . ....||.||... + .+.+|.|.|.|..-.|
T Consensus 2 ~lstHVLDt~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 69 (115)
T 1f86_A 2 PLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 69 (115)
T ss_dssp CEEEEEEETTTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred CeeEEEccCCCCCcCCCCEEEEEEcCCCCCcEEEEEeecCCCccccCcCCCCCCcceEEEEEEEhhHh
Confidence 37888999 5999999999988531 1 246899999972 1 1356899999864333
No 54
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=57.71 E-value=13 Score=30.38 Aligned_cols=50 Identities=18% Similarity=0.087 Sum_probs=32.2
Q ss_pred eEEEEEECCCCCccc-ccEEEEeccceeeeeCCCccEEEE-ecCCceEEEEEE
Q psy7340 316 GVQGFVTDDLGNPVE-KASLKIKGRDVGFQTTKYGEFWRI-LLPGIYKLEVYA 366 (440)
Q Consensus 316 ~IsG~V~D~~GePL~-GAtV~IkGt~~gt~TD~~G~F~l~-lp~G~ytL~VS~ 366 (440)
.+--++++++|.|+| ||.|...+.....+...+|..++. +++. -.|.|..
T Consensus 9 ~~ll~l~~~dG~plPfGA~V~d~~g~~~giVG~~G~vyl~gl~~~-g~L~V~W 60 (94)
T 3l48_A 9 RLFAILRLADGSQPPFGASVTSEKGRELGMVADEGLAWLSGVTPG-ETLSVNW 60 (94)
T ss_dssp CEEEEEEETTSCCCCTTCEEECTTCCEEEEBCGGGEEEESSCCTT-CEEEEEC
T ss_pred EEEEEEECCCCCcCCCccEEEcCCCceEEEECCCCEEEEECCCCC-CEEEEEE
Confidence 345668899999998 577764443444677777876554 4433 3566665
No 55
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=57.09 E-value=8.3 Score=34.47 Aligned_cols=25 Identities=20% Similarity=0.194 Sum_probs=20.3
Q ss_pred eeeeeCCCccEE-EEecCCceEEEEE
Q psy7340 341 VGFQTTKYGEFW-RILLPGIYKLEVY 365 (440)
Q Consensus 341 ~gt~TD~~G~F~-l~lp~G~ytL~VS 365 (440)
..+++|.+|+|. .++|+|.|-|..+
T Consensus 89 r~t~cD~~G~F~F~~Lp~G~Yyl~a~ 114 (150)
T 3qec_A 89 REATTDQNGRFDFDHIPNGTYYISSE 114 (150)
T ss_dssp EEEECCTTSEEEEEEECSEEEEEEEE
T ss_pred eEEEeCCCCcEEECCCCCccEEEEEE
Confidence 357899999995 4799999987654
No 56
>3o59_X DNA polymerase II large subunit; alpha helical structure, transferase; HET: DNA; 2.20A {Pyrococcus horikoshii}
Probab=53.74 E-value=4.6 Score=39.67 Aligned_cols=52 Identities=29% Similarity=0.504 Sum_probs=35.8
Q ss_pred cccceeEeccc-cCCCCCeeeee---eeeeee--------------c---ccCCCCCCccchHHHHHHHHHHHH
Q psy7340 92 EKKSSVKTPKF-WGQGGSYVSIF---PIRWAI--------------R---HSTPYRPSCRDAFLFIICEFILYQ 144 (440)
Q Consensus 92 ~~~~~vk~~~~-~~~~~~~~~~~---~~~~~~--------------~---~~~~~~~~~~~~~~~~~~~~~~~~ 144 (440)
.--..|++.|. |||++.|++++ |||-|= | --..|.|.- |-.-=.+-|.-||.
T Consensus 123 EGI~~V~i~kN~~~DGteYl~vyyAGPIRSAGGTAqALSVLvaDyvR~~lGi~rykp~~-~EieRyvEEi~lY~ 195 (300)
T 3o59_X 123 EGIASVKIKRNTWSDNSEYLALYYAGPIRSSGGTAQALSVLVGDYVRRKLGLDRFKPSE-KHIERMVEEVDLYH 195 (300)
T ss_dssp CCEEEEEEEECTTTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHHHHHTTCCCCCCCH-HHHHHHHHHHHHHH
T ss_pred ccccceeeccccCCCCCEEEEEEEecCccccccHHHHHHHHHHHHHHHhcCcccCCCCH-HHHHHHHHHHHHHH
Confidence 34668999998 99999999998 888662 2 124677742 33344456677775
No 57
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=52.34 E-value=12 Score=32.57 Aligned_cols=53 Identities=23% Similarity=0.309 Sum_probs=39.5
Q ss_pred eEEEEEEC-CCCCcccccEEEEecc--------ceeeeeCCCccEE--E---EecCCceEEEEEEec
Q psy7340 316 GVQGFVTD-DLGNPVEKASLKIKGR--------DVGFQTTKYGEFW--R---ILLPGIYKLEVYADG 368 (440)
Q Consensus 316 ~IsG~V~D-~~GePL~GAtV~IkGt--------~~gt~TD~~G~F~--l---~lp~G~ytL~VS~IG 368 (440)
.|+-.|+| ..|.|.+|+.|.+.-. -....||.||... + .+.+|.|.|.|..-.
T Consensus 11 ~LStHVLDt~~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~ 77 (127)
T 2h4e_A 11 PLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKS 77 (127)
T ss_dssp CEEEEEEETTTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHH
T ss_pred CEEEEEecCCCcCCCCCCEEEEEEeCCCCCeEEEEEeecCCCccccCcCCCCCccceEEEEEEEhHH
Confidence 48999999 5999999999988531 1246899999972 1 145689999986433
No 58
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=52.20 E-value=16 Score=37.71 Aligned_cols=29 Identities=34% Similarity=0.446 Sum_probs=21.7
Q ss_pred eeeCCCccEEE-EecCCceEEEEE--Eeccce
Q psy7340 343 FQTTKYGEFWR-ILLPGIYKLEVY--ADGYVP 371 (440)
Q Consensus 343 t~TD~~G~F~l-~lp~G~ytL~VS--~IGY~~ 371 (440)
..||.+|.|.+ .+++|.|.|.=. --||..
T Consensus 372 ~~td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l 403 (444)
T 2x9x_A 372 LVSDAQGRFEITGLLAGTYYLEETKQPAGYAL 403 (444)
T ss_dssp EECCTTCEEEEEEECSEEEEEEEEECCTTSCC
T ss_pred EEECCCCeEEECCCCCceEEEEEeeCCCCccc
Confidence 47899999965 689999987633 257765
No 59
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=47.89 E-value=26 Score=34.77 Aligned_cols=44 Identities=18% Similarity=0.080 Sum_probs=33.8
Q ss_pred ECC-CCCcccccEEEEecc---ce-------eeeeCCCccEEE-EecCCceEEEEE
Q psy7340 322 TDD-LGNPVEKASLKIKGR---DV-------GFQTTKYGEFWR-ILLPGIYKLEVY 365 (440)
Q Consensus 322 ~D~-~GePL~GAtV~IkGt---~~-------gt~TD~~G~F~l-~lp~G~ytL~VS 365 (440)
+|. ++.+|.||...+... .. ...||.+|.|.+ .+++|.|.|.=.
T Consensus 258 ~d~~~~~~L~GA~F~l~~~~g~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 258 IDSANKNKMKGAEFVLKDNNGKIVVVAGKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp EETTTCCBCSCCEEEEEETTSCBCBSSSSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred EeCCCCcccCCCEEEEEeCCCCEEEeccceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 564 689999999999742 22 357899999965 589999997743
No 60
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=43.44 E-value=23 Score=36.02 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=40.7
Q ss_pred eeEEEEEECCCCCcccccEEEEeccc-------e-eeeeCCCccEEEEe----cCCceEEEEEEeccc
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRD-------V-GFQTTKYGEFWRIL----LPGIYKLEVYADGYV 370 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~-------~-gt~TD~~G~F~l~l----p~G~ytL~VS~IGY~ 370 (440)
..++-+|+|.+|+|++|..|.+.-.. . ...++.+|.|...+ ..|.|++..+.-|-.
T Consensus 212 ~t~t~~v~Da~GNpv~g~~V~f~~~~~~~~~~t~s~~tt~~~G~~~~t~ta~t~aG~~~Vta~v~g~~ 279 (414)
T 3tkv_A 212 TTVTLVAKDAHGNAISGLSLSASLTGTASEGATVSSWTEKGDGSYVATLTTGGKTGELRVMPLFNGQP 279 (414)
T ss_dssp EEEEEECBBTTCCBCCSCCEEEEEESGGGTTCEECCCEEEETTEEEEEEECCSCCEEEEEEEEETTEE
T ss_pred EEEEEEEEcCCCCCcCCCEEEEEEccCCCCCceecceEECCCcEEEEEEEcCcccceEEEEEEECCEe
Confidence 46888999999999999887665221 1 23668899996543 457888888876644
No 61
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=40.31 E-value=16 Score=37.07 Aligned_cols=53 Identities=17% Similarity=0.174 Sum_probs=37.5
Q ss_pred EEEEEECCCCCcccccEEEEe---cc------ceeeeeCCCccEEEEe----cCCceEEEEEEecc
Q psy7340 317 VQGFVTDDLGNPVEKASLKIK---GR------DVGFQTTKYGEFWRIL----LPGIYKLEVYADGY 369 (440)
Q Consensus 317 IsG~V~D~~GePL~GAtV~Ik---Gt------~~gt~TD~~G~F~l~l----p~G~ytL~VS~IGY 369 (440)
+.=+|+|.+|+|++|..|.+. |. .....+|.+|.|...+ .+|.+.+.++.-|-
T Consensus 111 ~t~~v~Da~gnpv~g~~V~~~~~~g~~~~~~t~~~~t~~~~G~~tatlT~~t~aG~~~Vta~v~g~ 176 (414)
T 3tkv_A 111 AIWTAKDANDNPVTGLNPDAPSLSGAAAAGSTASGWTDNGDGTWTAQISLGTTAGELDVMPKLNGQ 176 (414)
T ss_dssp EEEECBCTTCCBCCSCCCCCCEEESGGGTTCEECCCEECSSSEEEEEEECCSCCEEEEEECEETTE
T ss_pred EEEEEECCCCCCcCCCEEEEEecCCCcccceeccceEECCCcEEEEEEEeccccccEEEEEEECCe
Confidence 455789999999999877654 21 1123567999996544 36888888877664
No 62
>2ahq_A Sigma-54, RNA polymerase sigma factor RPON; sigma-54,sigma factors, solution structure, transcription; NMR {Aquifex aeolicus} PDB: 2o8k_A 2o9l_A
Probab=39.80 E-value=10 Score=30.14 Aligned_cols=50 Identities=10% Similarity=0.266 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHhhhhhcccceeEeccccC
Q psy7340 55 AQQIENMICQMAQTGQIMNKLGENELIGLLEQISNREEKKSSVKTPKFWG 104 (440)
Q Consensus 55 a~~vE~~li~~aq~G~i~~kv~e~~l~~iL~~i~~~~~~~~~vk~~~~~~ 104 (440)
+++|.++|.++...---..++||++|.++|..-.-.-.+.|.-|+|.-++
T Consensus 18 ~~~Ik~~Ik~lI~~Ed~~kPlSD~~I~~~L~~~Gi~IaRRTVaKYRe~l~ 67 (76)
T 2ahq_A 18 QGELMKLIKEIVENEDKRKPYSDQEIANILKEKGFKVARRTVAKYREMLG 67 (76)
T ss_dssp HHHHHHHHHHHGGGCCSSSCCCHHHHHHHHTTTSSCCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHcC
Confidence 57899999999999988899999999999975432333444556666554
No 63
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=39.51 E-value=54 Score=26.83 Aligned_cols=51 Identities=14% Similarity=0.207 Sum_probs=36.5
Q ss_pred eeEEEEEECCCCCcccccEEEEeccceeeeeCCCccEE--EEecCCceEEEEEEec
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRDVGFQTTKYGEFW--RILLPGIYKLEVYADG 368 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~~gt~TD~~G~F~--l~lp~G~ytL~VS~IG 368 (440)
..|++...|.+| .|..+.+++.|...+..| .--|. ....+|.|+|.+.+..
T Consensus 19 v~i~a~A~D~dg-~V~kVef~vdg~~vg~dt--~apy~~~w~~~~G~htl~a~AtD 71 (98)
T 3pe9_A 19 LKITATASDSDG-KISRVDFLVDGEVIGSDR--EAPYEYEWKAVEGNHEISVIAYD 71 (98)
T ss_dssp EEEEEEECCSSS-CEEEEEEEETTEEEEEEC--SSSEEEEEECCSEEEEEEEEEEE
T ss_pred EEEEEEEEeCCC-CEEEEEEEECCEEecccc--cCCEEEEEEcCCccEEEEEEEEE
Confidence 468899888776 789999999887665544 44453 3334799999887643
No 64
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=39.23 E-value=51 Score=35.24 Aligned_cols=53 Identities=13% Similarity=0.030 Sum_probs=38.4
Q ss_pred eeEEEEEECCCCCcccccEEEEeccceeeeeCCCccEEE--EecC--CceEEEEEEe
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRDVGFQTTKYGEFWR--ILLP--GIYKLEVYAD 367 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~~gt~TD~~G~F~l--~lp~--G~ytL~VS~I 367 (440)
..++-+|+|.+|.|+++..|.+........||.+|...+ +.+. ..+.|.+++.
T Consensus 338 ~~~~v~v~~~dg~P~~~~~V~v~~~~~~~~td~~G~a~f~i~t~~~~~~l~i~~~~~ 394 (627)
T 3hrz_A 338 YELTVYVTNPDGSPAAHVPVVSEAFHSMGTTLSDGTAKLILNIPLNAQSLPITVRTN 394 (627)
T ss_dssp EEEEEEEECTTSCBCTTCEEEEGGGTEEEECCTTSEEEEEECCCTTCSEEEEEEEEC
T ss_pred EEEEEEEECCCCCcCCCceEEEEcCcceeEECCCCeEEEEEECCCCCcEEEEEEEeC
Confidence 356677889999999999999876556678999998744 4443 3455666553
No 65
>2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A
Probab=36.22 E-value=38 Score=36.33 Aligned_cols=30 Identities=33% Similarity=0.401 Sum_probs=22.5
Q ss_pred eeeCCCccEEE-EecCCceEEEEE-E-ecccee
Q psy7340 343 FQTTKYGEFWR-ILLPGIYKLEVY-A-DGYVPR 372 (440)
Q Consensus 343 t~TD~~G~F~l-~lp~G~ytL~VS-~-IGY~~q 372 (440)
.+||.+|.|.+ .+++|.|.|.=. + -||...
T Consensus 527 ~~t~~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~ 559 (605)
T 2y1v_A 527 LVSDAQGRFEITGLLAGTYYLEETKQPAGYALL 559 (605)
T ss_dssp EECCTTCEEEEEEECSEEEEEEEEECCTTSCCC
T ss_pred EeeCCCCEEEECCCCCceEEEEEeeCCCCcccC
Confidence 47899999965 699999987643 2 588653
No 66
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=33.60 E-value=72 Score=28.66 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=34.1
Q ss_pred eeEEEEEECCCCCcccccEEEEeccceeeeeCCCccEEEEecCCceEEEEEEec
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRDVGFQTTKYGEFWRILLPGIYKLEVYADG 368 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~~gt~TD~~G~F~l~lp~G~ytL~VS~IG 368 (440)
..|++...|.+| .|..+.+++.|...++.+...-.|....+.|.|+|.+.+..
T Consensus 111 vtl~~~AsD~~g-~V~~Ve~~~dg~~v~t~t~~~y~~~~~~~~G~~tl~a~A~D 163 (190)
T 3pdd_A 111 LKITATASDSDG-KISRVDFLVDGEVIGSDREAPYEYEWKAVEGNHEISVIAYD 163 (190)
T ss_dssp EEEEEEEECSSS-CEEEEEEEETTEEEEEECSSSEEEEEECCSEEEEEEEEEEE
T ss_pred EEEEEEEECCCC-cEEEEEEEECCEEEecccCCCEEEEEecCCeeEEEEEEEEE
Confidence 467888888766 57888888877766654433223322336788888876643
No 67
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.53 E-value=74 Score=25.86 Aligned_cols=44 Identities=16% Similarity=0.116 Sum_probs=31.3
Q ss_pred eEEEEEECCCCCcccccEEEEeccceeeeeCCCccEEEEe---cCCceEEEEEEecc
Q psy7340 316 GVQGFVTDDLGNPVEKASLKIKGRDVGFQTTKYGEFWRIL---LPGIYKLEVYADGY 369 (440)
Q Consensus 316 ~IsG~V~D~~GePL~GAtV~IkGt~~gt~TD~~G~F~l~l---p~G~ytL~VS~IGY 369 (440)
.++..|++.+|..++. ...-+.+|.|.+.. .+|.|+|.|.+-|.
T Consensus 31 ~ltv~V~~PsG~~~~~----------~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~ 77 (95)
T 2ee9_A 31 EITGEVHMPSGKTATP----------EIVDNKDGTVTVRYAPTEVGLHEMHIKYMGS 77 (95)
T ss_dssp SEEEEEECTTSCEECC----------EEEECSSSCEEEECCCCSSEEEEEEEEESSC
T ss_pred CEEEEEECCCCCcccc----------EEEeCCCCeEEEEEEecCCEeEEEEEEECCE
Confidence 4788888888765531 12346789997653 35899999998885
No 68
>2xet_A CAF1A usher, F1 capsule-anchoring protein; transport protein; 1.60A {Yersinia pestis}
Probab=31.34 E-value=1e+02 Score=24.22 Aligned_cols=48 Identities=10% Similarity=-0.141 Sum_probs=27.8
Q ss_pred EEEEECCCCCcccc-cEE-EEeccceeeeeCCCccEEE-EecCCceEEEEEE
Q psy7340 318 QGFVTDDLGNPVEK-ASL-KIKGRDVGFQTTKYGEFWR-ILLPGIYKLEVYA 366 (440)
Q Consensus 318 sG~V~D~~GePL~G-AtV-~IkGt~~gt~TD~~G~F~l-~lp~G~ytL~VS~ 366 (440)
--++++.+|.|+|. |.| .-.+.....+...+|..++ .+++ .-+|.|..
T Consensus 5 l~~l~~~dG~~lPfGa~V~~~~~g~~~giVg~~G~vyl~g~~~-~~~L~V~w 55 (89)
T 2xet_A 5 FLHLKRSDNKPVPFGSIVTIEGQSSSSGIVGDNSGVYLTGLPK-KSKILVKW 55 (89)
T ss_dssp EEEEEETTSCBCCTTCEEEETTCCSCCEECCTTSEEEEEEECS-EEEEEEES
T ss_pred EEEEEcCCCCcCCCccEEEECCCCCEEEEEcCCCEEEEECCCC-CCEEEEEE
Confidence 34578899999976 555 4222223456677786544 3443 33565554
No 69
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=31.10 E-value=28 Score=41.40 Aligned_cols=50 Identities=18% Similarity=0.199 Sum_probs=37.5
Q ss_pred EEEEEECCCCCcccccEEEEeccceeeeeCCCc--cEEEEecC--CceEEEEEE
Q psy7340 317 VQGFVTDDLGNPVEKASLKIKGRDVGFQTTKYG--EFWRILLP--GIYKLEVYA 366 (440)
Q Consensus 317 IsG~V~D~~GePL~GAtV~IkGt~~gt~TD~~G--~F~l~lp~--G~ytL~VS~ 366 (440)
+.-.++|.+|.|+++..|.+...+....||.+| .|.++.+. |.|.|.+++
T Consensus 371 ~~v~~~~~dG~p~~~~~v~v~~~~~~~~t~~~G~~~~~i~~~~~~g~y~l~v~~ 424 (1661)
T 2b39_A 371 LMVYVTNPDGSPARHIPVVTQGSNVQSLTQDDGVAKLSINTQNKRDPLTITVRT 424 (1661)
T ss_dssp CCBBCBBTTTBCCSSCCEEETTCCCCCCCSSSCBCCCEEEECSCCSCEEEEEEE
T ss_pred EEEEEEcCCCCCcCCceEEEeccceEEEECCCCeEEEEEECCCCCcEEEEEEEE
Confidence 344467899999999999987655566788888 56666553 688888865
No 70
>2dm9_A V-type ATP synthase subunit E; A-ATPase, structural genomics, NPPSFA, national project on P structural and functional analyses; 1.85A {Pyrococcus horikoshii} SCOP: d.81.4.1 PDB: 2dma_A 4dt0_A
Probab=29.66 E-value=1.5e+02 Score=25.77 Aligned_cols=110 Identities=19% Similarity=0.191 Sum_probs=59.9
Q ss_pred HHHHHHHHhcCHHHHHHhhhccccCchHHHHHHHHHHHHHH---cCCCCCCCCHHHHHHH---HHHhhhhhcccceeEec
Q psy7340 27 MKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQ---TGQIMNKLGENELIGL---LEQISNREEKKSSVKTP 100 (440)
Q Consensus 27 ~~~~~L~qiL~~eAreRL~~i~lvkPe~a~~vE~~li~~aq---~G~i~~kv~e~~l~~i---L~~i~~~~~~~~~vk~~ 100 (440)
.|+.++..++ ..|+.+|.++ ..++....+.++|.+... .+.+.-.++.+++..+ +..+...-. ...+++.
T Consensus 78 ~~~ev~~~~~-~~a~~~l~~l--~~~~y~~~l~~li~e~~~~~~~~~v~i~v~~~D~~~v~~~~~~~~~~~~-~~~l~i~ 153 (198)
T 2dm9_A 78 IQEEIISSVL-EEVKRRLETM--SEDEYFESVKALLKEAIKELNEKKVRVMSNEKTLGLIASRIEEIKSELG-DVSIELG 153 (198)
T ss_dssp ---CHHHHHH-HHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHTCSEEEEECCHHHHHHHHHTHHHHHHHCT-TCEEEEC
T ss_pred HHHHHHHHHH-HHHHHHHHhc--CHHHHHHHHHHHHHHHHHHcCCCCEEEEECHhHHHHHHHHHHHHHHHhc-CceEEEC
Confidence 5556666666 5899999994 455566777777777553 3666666766665444 333322111 2244442
Q ss_pred cccCCCCCeeeeeeeeeeecccCCCC---CCc-cchHHHHHHHHHHHHHHHhhh
Q psy7340 101 KFWGQGGSYVSIFPIRWAIRHSTPYR---PSC-RDAFLFIICEFILYQIHKTLF 150 (440)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~ 150 (440)
..=+..|.++ -.++.. -.| -+..|=.+++.++-.|++.||
T Consensus 154 ~~~~~~GG~~----------i~~~~G~i~id~tl~~rl~~~~~~l~~~i~~~LF 197 (198)
T 2dm9_A 154 ETVDTMGGVI----------VETEDGRIRIDNTFEARMERFEGEIRSTIAKVLF 197 (198)
T ss_dssp CCCCCSSEEE----------EEETTSSCEEEEEHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCccCceE----------EEeCCCCEEEECcHHHHHHHHHHHhHHHHHHHhc
Confidence 2111112221 112211 111 256677889999999999998
No 71
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=29.17 E-value=73 Score=37.95 Aligned_cols=52 Identities=17% Similarity=0.252 Sum_probs=36.4
Q ss_pred eeEEEEEECCCCCcccccEEEEeccce-------------eeeeCCCcc--EEEEecCCc--eEEEEEE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRDV-------------GFQTTKYGE--FWRILLPGI--YKLEVYA 366 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~~-------------gt~TD~~G~--F~l~lp~G~--ytL~VS~ 366 (440)
..+.-.|+|.+|.|+++..|.+..... ...||.+|. |.++++.+. |.|.+++
T Consensus 369 ~~~~v~~~~~dG~p~~~~~v~l~~~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~~~~~~~~~~~l~v~~ 437 (1676)
T 3cu7_A 369 YPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLNLPSGVTVLEFNVKT 437 (1676)
T ss_dssp EEEEEEEEETTCCBCCSCEEEEEEEEEETTSCEEECCCEEEECCSSSCEEEEEECCCTTEEEEEEEEEE
T ss_pred EEEEEEEEcCCCCccCcceEEEeccccccccccccccccceeEECCCCeEEEEEECCCCCeEEEEEEEE
Confidence 356667889999999999988865322 457788894 555555554 4667764
No 72
>4efa_E V-type proton ATPase subunit E; heterotrimer, peripheral stalk, vacuolar ATPase, hydrolase; 2.82A {Saccharomyces cerevisiae} PDB: 4dl0_J 2kz9_A
Probab=28.95 E-value=1.8e+02 Score=26.81 Aligned_cols=125 Identities=10% Similarity=0.103 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhcCHHHHHHhhhccccCchHHHHHHHHHHHHHHcC---C--CC-CCCCHHHHHHHHHHhhhhhcccceeE
Q psy7340 25 KDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMAQTG---Q--IM-NKLGENELIGLLEQISNREEKKSSVK 98 (440)
Q Consensus 25 e~~~~~~L~qiL~~eAreRL~~i~lvkPe~a~~vE~~li~~aq~G---~--i~-~kv~e~~l~~iL~~i~~~~~~~~~vk 98 (440)
-..|+.+|..+++ +|++||.++.-=.......++..|.+.+... . ++ .+-+-+-+..+|..+...-..+....
T Consensus 89 L~ar~e~i~~v~~-~a~~~L~~~~~d~~~Y~~lL~~Li~eal~~l~e~~v~V~~~~~D~~lv~~~l~~~~~~~~~~~~~~ 167 (233)
T 4efa_E 89 LSAREQSLDGIFE-ETKEKLSGIANNRDEYKPILQSLIVEALLKLLEPKAIVKALERDVDLIESMKDDIMREYGEKAQRA 167 (233)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHCCSEEEEEECTTTHHHHTTSHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhhcCHHHHHHHHHHHHHHHHHhcCCCcEEEEecHhhHHHHHHHHHHHHHHHHHHhCCC
Confidence 3456777888885 8999999885433334566677777665442 1 22 34444444556666544321111111
Q ss_pred eccccCCCCCeeeeeeee-eeecccCCCCCCcc---chHHHHHHHHHHHHHHHhhh
Q psy7340 99 TPKFWGQGGSYVSIFPIR-WAIRHSTPYRPSCR---DAFLFIICEFILYQIHKTLF 150 (440)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 150 (440)
....-.++.+|.+--.+. =.+-.+.--|-.|- |+-|=.+++-.+-.|.++||
T Consensus 168 ~~~~~~~~~~~l~~~~~~GGvil~s~dGkI~vdNTle~RL~~~~~~~lp~Ir~~LF 223 (233)
T 4efa_E 168 PLEEIVISNDYLNKDLVSGGVVVSNASDKIEINNTLEERLKLLSEEALPAIRLELY 223 (233)
T ss_dssp CCCEEEECSSCCCTTTCSSEEEEECTTSCCEEEEEHHHHHHHHHHHHHHHHHHHHS
T ss_pred CccccccccccCCcccccCceEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHC
Confidence 111111222222100000 00111111222332 56677889999999999998
No 73
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=25.96 E-value=2.4e+02 Score=22.09 Aligned_cols=53 Identities=17% Similarity=0.061 Sum_probs=33.4
Q ss_pred eeEEEEEECCCCCccccc--EEEEeccc------eeeeeCCCccEEE--Ee----cCCceEEEEEEe
Q psy7340 315 RGVQGFVTDDLGNPVEKA--SLKIKGRD------VGFQTTKYGEFWR--IL----LPGIYKLEVYAD 367 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GA--tV~IkGt~------~gt~TD~~G~F~l--~l----p~G~ytL~VS~I 367 (440)
..+++.+.|.+..|+.+. +|.+.+.+ ....++.+|.|.. .+ +.|.|+|.+..-
T Consensus 19 V~~~~~~~~~~~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 19 VKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp EEEEEEEECGGGCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred EEEEEEEECCCCcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 347788888777777654 45555432 1245677888843 33 458898888653
No 74
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=25.45 E-value=4e+02 Score=30.72 Aligned_cols=81 Identities=17% Similarity=0.162 Sum_probs=48.2
Q ss_pred eeEEEEEECCCCCcccc---cEEEEeccce------eeeeCCCccEE--EEe----cCCceEEEEEEeccceeEEEEEEe
Q psy7340 315 RGVQGFVTDDLGNPVEK---ASLKIKGRDV------GFQTTKYGEFW--RIL----LPGIYKLEVYADGYVPREIDFMVV 379 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~G---AtV~IkGt~~------gt~TD~~G~F~--l~l----p~G~ytL~VS~IGY~~q~itItVt 379 (440)
..+++.++|.+..|+.. ++|.|.+.+. ...++..|.|. +.+ +.|.|+|.+.+-+-......+.|.
T Consensus 117 V~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~~~~~~~~~F~Ve 196 (1325)
T 2pn5_A 117 VNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVK 196 (1325)
T ss_dssp EEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEEEecCCccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeCCCcEEEEEEEEE
Confidence 35788899988888874 5777765431 23456788884 334 458999999774422123344443
Q ss_pred cCCceEEEEEEecccc
Q psy7340 380 EQHPTLLNVTLHTSKW 395 (440)
Q Consensus 380 ~~~~t~lnI~L~~~~~ 395 (440)
.-....+.+.+.+...
T Consensus 197 eYvlP~feV~i~~~~~ 212 (1325)
T 2pn5_A 197 EYVLSTFDVQVMPSVI 212 (1325)
T ss_dssp CSCCCCEEEEEEESSC
T ss_pred eccCceEEEEEecCce
Confidence 3222345555554433
No 75
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=24.26 E-value=1.5e+02 Score=23.76 Aligned_cols=44 Identities=18% Similarity=0.202 Sum_probs=29.6
Q ss_pred eEEEEEECCCCCcccccEEEEeccceeeeeCCCccEEEEe---cCCceEEEEEEecc
Q psy7340 316 GVQGFVTDDLGNPVEKASLKIKGRDVGFQTTKYGEFWRIL---LPGIYKLEVYADGY 369 (440)
Q Consensus 316 ~IsG~V~D~~GePL~GAtV~IkGt~~gt~TD~~G~F~l~l---p~G~ytL~VS~IGY 369 (440)
.++..|.+.+|..++. ...-+.+|.|.+.. .+|.|.|.|.+-|.
T Consensus 23 ~l~v~V~~PsG~~~~~----------~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~ 69 (93)
T 2d7n_A 23 ELTGEVRMPSGKTARP----------NITDNKDGTITVRYAPTEKGLHQMGIKYDGN 69 (93)
T ss_dssp CEEEEEECTTSCEECC----------EEEECSSSCEEEEECCSSCEEEEEEEEESSS
T ss_pred CEEEEEECCCCCccce----------EEEECCCCEEEEEEEccCCEEEEEEEEECCE
Confidence 4677788777654321 23346789996543 35899999998884
No 76
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=23.34 E-value=1.2e+02 Score=26.49 Aligned_cols=60 Identities=22% Similarity=0.261 Sum_probs=41.0
Q ss_pred eeEEEEEECCCCCcccccEEEEeccceeeeeCCCccEE-----EEecCCceEEEEEEeccceeEEEEEE
Q psy7340 315 RGVQGFVTDDLGNPVEKASLKIKGRDVGFQTTKYGEFW-----RILLPGIYKLEVYADGYVPREIDFMV 378 (440)
Q Consensus 315 ~~IsG~V~D~~GePL~GAtV~IkGt~~gt~TD~~G~F~-----l~lp~G~ytL~VS~IGY~~q~itItV 378 (440)
..|+-.|+|-+|+||..+.+... ...-+..|.+. ....||.|+-+|+|-|.....+.+..
T Consensus 66 A~it~IvKDid~nPIn~v~i~~~----~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~i~l~y 130 (146)
T 2lv4_A 66 ATITTIVKDIDGNPVNEVHINKT----VARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERIDISF 130 (146)
T ss_dssp EEEEEECBBTTSCBCCCCCCBCC----EECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCEEEEEE
T ss_pred eEEEEEEEeCCCCcccceeeeee----eeccccccceeecceecCCCCcceEEEEEEcCCCCceEEEEe
Confidence 46888899999999987655431 12233445542 23468999999999998887666544
No 77
>4ep8_A Urease subunit gamma; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_A 1a5k_A 1a5n_A 1a5o_A 1ef2_C* 1ejr_A* 1ejs_A* 1ejt_A* 1eju_A* 1ejv_A* 1a5m_A* 1ejw_A* 1fwa_A* 1fwb_A* 1fwc_A* 1fwd_A* 1fwe_A* 1fwf_A* 1fwg_A* 1fwh_A* ...
Probab=21.11 E-value=68 Score=26.82 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.1
Q ss_pred CCHHHHHHhhh-ccccchhhHHHHHHHHHHHHhcCC
Q psy7340 242 LDQSARARLNT-IMLCKPEKAQQIENMICQMAQTGQ 276 (440)
Q Consensus 242 Lt~eAreRL~~-i~lvkpe~a~~VE~~LiqLAqsG~ 276 (440)
.-.=||.|++| ++|-.||-..-|-..+.-.|+.|+
T Consensus 16 aa~lA~rR~~RGlkLN~pEAvAlIs~~v~E~aRdG~ 51 (100)
T 4ep8_A 16 AALVAERRLARGLKLNYPESVALISAFIMEGARDGK 51 (100)
T ss_dssp HHHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHhcCC
Confidence 33458999999 999999999999999999999986
No 78
>2dm9_A V-type ATP synthase subunit E; A-ATPase, structural genomics, NPPSFA, national project on P structural and functional analyses; 1.85A {Pyrococcus horikoshii} SCOP: d.81.4.1 PDB: 2dma_A 4dt0_A
Probab=20.72 E-value=3.4e+02 Score=23.33 Aligned_cols=59 Identities=17% Similarity=0.260 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhCCHHHHHHhhhccccchhhHHHHHHHHHHHH---hcCCccccccchhHHHH
Q psy7340 228 EQIKDMKNSILSQVLDQSARARLNTIMLCKPEKAQQIENMICQMA---QTGQIMNKLGENELIGL 289 (440)
Q Consensus 228 ~~~e~~~~~il~qiLt~eAreRL~~i~lvkpe~a~~VE~~LiqLA---qsG~It~KISDe~LkeI 289 (440)
+.....|+.++..++ ..|+.+|.+ +..++....|...+.... ..+.+...++..+...+
T Consensus 73 ~~~l~~~~ev~~~~~-~~a~~~l~~--l~~~~y~~~l~~li~e~~~~~~~~~v~i~v~~~D~~~v 134 (198)
T 2dm9_A 73 RKRLAIQEEIISSVL-EEVKRRLET--MSEDEYFESVKALLKEAIKELNEKKVRVMSNEKTLGLI 134 (198)
T ss_dssp --------CHHHHHH-HHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHTCSEEEEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHh--cCHHHHHHHHHHHHHHHHHHcCCCCEEEEECHhHHHHH
Confidence 334446777777776 589999998 445555566666665543 44677777776665434
No 79
>4fur_A Urease subunit gamma 2; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Brucella melitensis biovar abortus}
Probab=20.54 E-value=77 Score=26.68 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=30.8
Q ss_pred CHHHHHHhhh-ccccchhhHHHHHHHHHHHHhcCC
Q psy7340 243 DQSARARLNT-IMLCKPEKAQQIENMICQMAQTGQ 276 (440)
Q Consensus 243 t~eAreRL~~-i~lvkpe~a~~VE~~LiqLAqsG~ 276 (440)
-.=||.|++| ++|-.||-..-|-..+.-.|+.|+
T Consensus 21 a~lA~rR~~RGlkLN~pEAvAlIs~~v~E~aRdG~ 55 (104)
T 4fur_A 21 SDVALKRKNKGLKLNHPEAVAVLSAYVLDGAREGK 55 (104)
T ss_dssp HHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHCCC
Confidence 3458999999 999999999999999999999996
No 80
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=20.10 E-value=74 Score=24.30 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=22.9
Q ss_pred eeeCCCccEEEEecCCceEEEEEEecccee
Q psy7340 343 FQTTKYGEFWRILLPGIYKLEVYADGYVPR 372 (440)
Q Consensus 343 t~TD~~G~F~l~lp~G~ytL~VS~IGY~~q 372 (440)
...|.+|.|.+.+..++-.+..+.-||.+.
T Consensus 5 i~~~~~G~frfrLka~NGevI~sSe~Y~sk 34 (64)
T 3bid_A 5 IYKDAKGEYRWRLKAANHEIIAQGEGYTSK 34 (64)
T ss_dssp EEECTTSCEEEEEECTTSCEEEECCCBSCH
T ss_pred EEECCCCCEEEEEEeCCCCEEEECCCcCCH
Confidence 467889999777766655666799999875
Done!