BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7342
(338 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P39205|CIN_DROME Molybdenum cofactor synthesis protein cinnamon OS=Drosophila
melanogaster GN=cin PE=1 SV=3
Length = 601
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 70/107 (65%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIF 265
+SD C+ + +D SGP+L QL+ E F + ++ VPDE + I+ +L+ W+D+ ++ +I
Sbjct: 11 ISDTCWQEPEKDTSGPILRQLIGETFANTQVIGNIVPDEKDIIQQELRKWIDREELRVIL 70
Query: 266 TSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSR 312
T+GGTG +PRDVTPEA L++K+ P + I E +K T A LSR
Sbjct: 71 TTGGTGFAPRDVTPEATRQLLEKECPQLSMYITLESIKQTQYAALSR 117
>sp|Q39054|CNX1_ARATH Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana
GN=CNX1 PE=1 SV=2
Length = 670
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 206 VSDRCFNKESEDKSGPLLAQLL---QEDFQHAHILKTCV-PDEMEEIKDKLKYWVDQSKV 261
VSD D+SGP ++ E A ++ T V PDE+E IKD L+ W D ++
Sbjct: 474 VSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEM 533
Query: 262 DLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSR 312
DLI T GGTG +PRDVTPEA +I+++ P + ++ E LK+TP AMLSR
Sbjct: 534 DLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSR 584
>sp|Q8BUV3|GEPH_MOUSE Gephyrin OS=Mus musculus GN=Gphn PE=1 SV=2
Length = 769
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKT--CVPDEMEEIKDKLKYWVDQSKVDL 263
VSD CF +ED+SG L L+Q+ + VPDE+EEIK+ L W D+ +++L
Sbjct: 22 VSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNL 81
Query: 264 IFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSR 312
I T+GGTG +PRDVTPEA +I+++ P + + L VTPL MLSR
Sbjct: 82 ILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSR 130
>sp|Q9PW38|GEPH_CHICK Gephyrin OS=Gallus gallus GN=GPHN PE=1 SV=1
Length = 736
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKT--CVPDEMEEIKDKLKYWVDQSKVDL 263
VSD CF +ED+SG L L+Q+ + VPDE+EEIK+ L W D+ +++L
Sbjct: 22 VSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNL 81
Query: 264 IFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSR 312
I T+GGTG +PRDVTPEA +I+++ P + + L VTPL MLSR
Sbjct: 82 ILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSR 130
>sp|Q9NQX3|GEPH_HUMAN Gephyrin OS=Homo sapiens GN=GPHN PE=1 SV=1
Length = 736
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKT--CVPDEMEEIKDKLKYWVDQSKVDL 263
VSD CF +ED+SG L L+Q+ + VPDE+EEIK+ L W D+ +++L
Sbjct: 22 VSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNL 81
Query: 264 IFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSR 312
I T+GGTG +PRDVTPEA +I+++ P + + L VTPL MLSR
Sbjct: 82 ILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSR 130
>sp|Q03555|GEPH_RAT Gephyrin OS=Rattus norvegicus GN=Gphn PE=1 SV=3
Length = 768
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 15/122 (12%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKT--CVPDEMEEIKDKLKYWVDQSKVDL 263
VSD CF +ED+SG L L+Q+ + VPDE+EEIK+ L W D+ +++L
Sbjct: 22 VSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNL 81
Query: 264 IFTSGGTGMSPRDVTPE-------------AMNHLIDKKVPCIEHIIQTEGLKVTPLAML 310
I T+GGTG +PRDVTPE A +I+++ P + + L VTPL ML
Sbjct: 82 ILTTGGTGFAPRDVTPEKFPTFPFCGLQKGATKEVIEREAPGMALAMLMGSLNVTPLGML 141
Query: 311 SR 312
SR
Sbjct: 142 SR 143
>sp|Q54KM0|GEPH_DICDI Gephyrin OS=Dictyostelium discoideum GN=gphn PE=3 SV=1
Length = 718
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 207 SDRCFNKESEDKSGPLLAQLLQEDFQHAH---------ILKTCVPDEMEEIKDKLKYWVD 257
SDR + D+SGP + +++ + + VPDE+E I+ + W
Sbjct: 40 SDRVSQGIAIDQSGPEIVAIIKNQLKQMMGESCSINVITVYKVVPDEIEHIQQMITQWT- 98
Query: 258 QSKVDLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSR 312
K LI T+GGTG +PRDVTPEA+ L++++ IE + L +TP AMLSR
Sbjct: 99 HLKYKLILTTGGTGFTPRDVTPEAIKPLLNRRTKGIEIAMLKTSLDITPHAMLSR 153
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 217 DKSGPLLAQLLQEDFQHAH--------ILKTCVPDEMEEIKDKLKYWVDQSK-VDLIFTS 267
D + P LA +LQE H L +PD++E +KD L +D SK D+I TS
Sbjct: 481 DSNSPTLATILQEISNHFGECCSRDNINLVGIIPDKLENLKDTL---LDCSKKSDIIITS 537
Query: 268 GGTGMSPRDVT 278
GG M D+
Sbjct: 538 GGVSMGHLDLV 548
>sp|P44645|MOG_HAEIN Molybdopterin adenylyltransferase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=mog PE=1 SV=1
Length = 197
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 203 LALVSDRCFNKESEDKSGP-LLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKV 261
L VSDR +D+ P L A L Q H+ +PDE I+ LK VD+
Sbjct: 9 LVSVSDRASAGVYQDQGIPELQAWLEQALVDPFHLETRLIPDEQPVIEQTLKELVDEQGC 68
Query: 262 DLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKGNCPKKW 321
L+ T+GGTG + RDVTP+A + D+++P ++ L P A+LSR
Sbjct: 69 HLVLTTGGTGPAKRDVTPDATLAVADREMPGFGEQMRQVSLHFVPTAILSR--------Q 120
Query: 322 VKLIRRQNVI 331
V +IR++++I
Sbjct: 121 VGVIRKESLI 130
>sp|P56421|MOG_HELPY Molybdopterin adenylyltransferase OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=mog PE=3 SV=1
Length = 176
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 199 TCHLLAL-VSDRCFNKESEDKSGPLLAQLLQEDFQHA-HILKTCVPDEMEEIKDKLKYWV 256
T H+ L SDR ED SG + ++L E + V DE + I+ L
Sbjct: 3 TIHIGVLSASDRASKGIYEDLSGKAIQEVLSEYLLNPLEFYYEIVADERDLIEKSLIKMC 62
Query: 257 DQSKVDLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSR 312
D+ + DL+ T+GGTG + RD+TPEA + K +P +++ LK P A+LSR
Sbjct: 63 DEYQCDLVVTTGGTGPALRDITPEATEKVCQKMLPGFGELMRMTSLKYVPTAILSR 118
>sp|P0AF05|MOG_SHIFL Molybdopterin adenylyltransferase OS=Shigella flexneri GN=mog PE=3
SV=1
Length = 195
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 203 LALVSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKT-CVPDEMEEIKDKLKYWVDQSKV 261
L +SDR + +DK P L + L L+T +PDE I+ L VD+
Sbjct: 8 LVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSC 67
Query: 262 DLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKGNCPKKW 321
L+ T+GGTG + RDVTP+A + D+++P ++ L P A+LSR
Sbjct: 68 HLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSR--------Q 119
Query: 322 VKLIRRQNVI 331
V +IR+Q +I
Sbjct: 120 VGVIRKQALI 129
>sp|P0AF03|MOG_ECOLI Molybdopterin adenylyltransferase OS=Escherichia coli (strain K12)
GN=mog PE=1 SV=1
Length = 195
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 203 LALVSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKT-CVPDEMEEIKDKLKYWVDQSKV 261
L +SDR + +DK P L + L L+T +PDE I+ L VD+
Sbjct: 8 LVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSC 67
Query: 262 DLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKGNCPKKW 321
L+ T+GGTG + RDVTP+A + D+++P ++ L P A+LSR
Sbjct: 68 HLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSR--------Q 119
Query: 322 VKLIRRQNVI 331
V +IR+Q +I
Sbjct: 120 VGVIRKQALI 129
>sp|P0AF04|MOG_ECO57 Molybdopterin adenylyltransferase OS=Escherichia coli O157:H7
GN=mog PE=3 SV=1
Length = 195
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 203 LALVSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKT-CVPDEMEEIKDKLKYWVDQSKV 261
L +SDR + +DK P L + L L+T +PDE I+ L VD+
Sbjct: 8 LVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSC 67
Query: 262 DLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKGNCPKKW 321
L+ T+GGTG + RDVTP+A + D+++P ++ L P A+LSR
Sbjct: 68 HLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSR--------Q 119
Query: 322 VKLIRRQNVI 331
V +IR+Q +I
Sbjct: 120 VGVIRKQALI 129
>sp|Q9ZL45|MOG_HELPJ Molybdopterin adenylyltransferase OS=Helicobacter pylori (strain
J99) GN=mog PE=3 SV=1
Length = 176
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 199 TCHLLAL-VSDRCFNKESEDKSGPLLAQLLQEDFQ-----HAHILKTCVPDEMEEIKDKL 252
T H+ L SDR ED SG + ++L E H I V DE + I+ L
Sbjct: 3 TIHIGVLSASDRASKGVYEDLSGKAIQEVLSEYLLNPLEFHYEI----VADERDLIEKSL 58
Query: 253 KYWVDQSKVDLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSR 312
D+ + DL+ T+GGTG + RD+TPEA + K +P +++ LK P A+LSR
Sbjct: 59 IKMCDEYQCDLVVTTGGTGPALRDITPEATKKVCQKMLPGFGELMRMTSLKYVPTAILSR 118
>sp|Q56208|MOACB_SYNE7 Molybdenum cofactor biosynthesis bifunctional protein
OS=Synechococcus elongatus (strain PCC 7942) GN=moaCB
PE=3 SV=1
Length = 319
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHIL-KTCVPDEMEEIKDKLKYWVDQSKVDLI 264
VSDR ++ED+SGPL+ L + Q A I TCV DE + LI
Sbjct: 166 VSDRVAADQAEDRSGPLIQNWLTD--QAATIATATCVADE-PALIQAAIQAAIAQGSALI 222
Query: 265 FTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKG 315
+GGTG+ PRD TPEA+ L VP I ++ G T + LSR G
Sbjct: 223 LLTGGTGLGPRDRTPEAIADLGAIPVPGIGEALRQAGRSETVMTWLSRSGG 273
>sp|Q57631|MOAB_METJA Probable molybdopterin adenylyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=moaB PE=3 SV=1
Length = 163
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 196 VRSTCHLLALVSDRCFN-----KESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKD 250
+++ + + VSD +N KE +DKSG LL + L + T +PD IK
Sbjct: 5 IKNIKYAVVTVSDSRYNDLIKGKEVDDKSGKLLKKELNAK------VYTIIPDNKNMIKG 58
Query: 251 KLKYWVDQSKVDLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGL-KVTPLAM 309
+++ V+ VD I +GGTG++ RDVT EA+ +I+K++ + I Q +V AM
Sbjct: 59 IVEHIVEFFDVDCIVFTGGTGIAERDVTVEALKEIIEKELDGFKIIFQKLSYEEVGFSAM 118
Query: 310 LSR 312
LSR
Sbjct: 119 LSR 121
>sp|Q816R0|MOAB_BACCR Molybdenum cofactor biosynthesis protein B OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=moaB PE=1 SV=1
Length = 169
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 200 CHLLALVSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQS 259
C ++ + R E DKSG LL +LL+E H V D+ E I+ + +
Sbjct: 16 CKIVTISDTRT---EETDKSGQLLHELLKEA-GHKVTSYEIVKDDKESIQQAVLAGYHKE 71
Query: 260 KVDLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGL--KVTPLAMLSRFKGNC 317
VD++ T+GGTG++ RDVT EA++ L+DK++ + + + AMLSR G
Sbjct: 72 DVDVVLTNGGTGITKRDVTIEAVSALLDKEIVGFGELFRMISYLEDIGSSAMLSRAIGGT 131
Query: 318 PKK-----------WVKLIRRQNVIPWLG 335
+ V+L + ++P LG
Sbjct: 132 IGRKVVFSMPGSSGAVRLAMNKLILPELG 160
>sp|P59014|MOACB_CHLTE Molybdenum cofactor biosynthesis bifunctional protein OS=Chlorobium
tepidum (strain ATCC 49652 / DSM 12025 / TLS) GN=moaCB
PE=3 SV=1
Length = 312
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 205 LVSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLI 264
++SD + D SG +L + LQ+ L T PDE EI ++ W+ + ++ I
Sbjct: 162 VMSDSIAAGTATDHSGAILREGLQKAGCAVEAL-TITPDEPVEIAATVEAWIGEG-IEFI 219
Query: 265 FTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKGN 316
TSGGTG+ PRD+ + + +++P +E + G T AMLSR
Sbjct: 220 VTSGGTGLGPRDLAIDTLAPKFTRRLPGVEQELLRWGQTKTRTAMLSRLAAG 271
>sp|Q8U3T3|MOAB_PYRFU Molybdopterin adenylyltransferase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=moaB PE=1
SV=1
Length = 169
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIF 265
VSD+ E EDKSGPL+ + L + +H + VPD+ E+ L + +S D++
Sbjct: 21 VSDKGAKGEREDKSGPLIIEELSKLGEHVYY--KIVPDDKIEVLIAL-FEAIKSGADVVV 77
Query: 266 TSGGTGMSPRDVTPEAMNHLIDKKV 290
T+GGTG++ RD+T E++ L DK++
Sbjct: 78 TTGGTGITRRDITIESIKPLFDKEL 102
>sp|Q9K8I4|MOAB_BACHD Molybdenum cofactor biosynthesis protein B OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=moaB PE=3 SV=1
Length = 170
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 17/149 (11%)
Query: 200 CHLLALVSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQS 259
C +L + R ++ DKSG L+ +LL E H V DE +I+ LK ++
Sbjct: 16 CMILTISDTRTYDT---DKSGALIRELL-EAKGHQVTEYQIVKDEYSQIQHWLKVAAGRA 71
Query: 260 KVDLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGLK--VTPLAMLSR----- 312
+D I +GGTG++ RD T EA+ +DK++P I + + + A+LSR
Sbjct: 72 DIDAILLNGGTGIALRDTTYEAVRDSLDKEMPGFGEIFRLLSFQEDIGTAAILSRAIAGV 131
Query: 313 ------FKGNCPKKWVKLIRRQNVIPWLG 335
F VKL + +IP LG
Sbjct: 132 RDGKAIFSMPGSTGAVKLAMTRIIIPELG 160
>sp|Q8CMK6|MOAB_STAES Molybdenum cofactor biosynthesis protein B OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=moaB PE=3 SV=1
Length = 176
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 17/117 (14%)
Query: 217 DKSGPLLAQLLQE-----DFQHAHILKTCVPDEMEEIKDKLKYWVDQS-KVDLIFTSGGT 270
DK G L+ L+ + D H I+K D++E I +LK W+ S ++D+I T+GGT
Sbjct: 31 DKGGQLIQSLINQHENHVDINHYRIVK----DDIEAITHQLKLWLTSSNQLDVIITTGGT 86
Query: 271 GMSPRDVTPEAMNHLIDKKV----PCIEHIIQTEGLKVTPLAMLSR-FKGNCPKKWV 322
G+S RDVT EA+ L+ K++ ++ TE V A+L+R G C +
Sbjct: 87 GISQRDVTIEAVRPLLTKELEGFGELFRYLSYTE--DVGTRALLTRAIAGTCDSTLI 141
>sp|Q5HLX4|MOAB_STAEQ Molybdenum cofactor biosynthesis protein B OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=moaB PE=3
SV=1
Length = 176
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 17/117 (14%)
Query: 217 DKSGPLLAQLLQE-----DFQHAHILKTCVPDEMEEIKDKLKYWVDQS-KVDLIFTSGGT 270
DK G L+ L+ + D H I+K D++E I +LK W+ S ++D+I T+GGT
Sbjct: 31 DKGGQLIQSLINQHENHVDINHYRIVK----DDIEAITHQLKLWLTSSNQLDVIITTGGT 86
Query: 271 GMSPRDVTPEAMNHLIDKKV----PCIEHIIQTEGLKVTPLAMLSR-FKGNCPKKWV 322
G+S RDVT EA+ L+ K++ ++ TE V A+L+R G C +
Sbjct: 87 GISQRDVTIEAVRPLLTKELEGFGELFRYLSYTE--DVGTRALLTRAIAGTCDSTLI 141
>sp|Q81KI3|MOAB_BACAN Molybdenum cofactor biosynthesis protein B OS=Bacillus anthracis
GN=moaB PE=3 SV=1
Length = 169
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 17/149 (11%)
Query: 200 CHLLALVSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQS 259
C ++ + R E DKSG LL +LL+E H V D+ E I+ + +
Sbjct: 16 CKIVTISDTRT---EETDKSGQLLHELLKEA-GHTVTSYEIVKDDKESIQQAVLAGYHRE 71
Query: 260 KVDLIFTSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQTEGL--KVTPLAMLSRFKGNC 317
VD++ T+GGTG++ RDVT EA++ L+ K++ + + + AMLSR G
Sbjct: 72 DVDVVLTNGGTGITKRDVTIEAVSALLHKEIVGFGELFRMISYLEDIGSSAMLSRAIGGT 131
Query: 318 PKK-----------WVKLIRRQNVIPWLG 335
+ V+L + ++P LG
Sbjct: 132 IGRKVVFSMPGSSGAVRLAMNKLILPELG 160
>sp|Q6GEF9|MOAB_STAAR Molybdenum cofactor biosynthesis protein B OS=Staphylococcus aureus
(strain MRSA252) GN=moaB PE=3 SV=1
Length = 168
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 194 ELVRSTCHLLALVSD-RCFNKESEDKSGPLLAQLLQED---FQHAHILKTCVPDEMEEIK 249
+L R+ + VSD R F+ DK G + QLLQ D AH T V DE I
Sbjct: 8 KLNRTVKAAVLTVSDTRNFDT---DKGGQCVLQLLQVDNVEVSDAHY--TIVKDEKVAIT 62
Query: 250 DKLKYWVDQSKVDLIFTSGGTGMSPRDVTPEAMNHLIDKKV 290
++K W+++ VD+I T+GGTG++ RDVT EA+ L+ K++
Sbjct: 63 TQVKKWLEED-VDVIITTGGTGIAQRDVTIEAVKPLLTKEI 102
>sp|P99137|MOAB_STAAN Molybdenum cofactor biosynthesis protein B OS=Staphylococcus aureus
(strain N315) GN=moaB PE=1 SV=1
Length = 168
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 217 DKSGPLLAQLLQED---FQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMS 273
DK G + QLLQ D AH T V DE I ++K W+++ +D+I T+GGTG++
Sbjct: 29 DKGGQCVRQLLQADDVEVSDAHY--TIVKDEKVAITTQVKKWLEED-IDVIITTGGTGIA 85
Query: 274 PRDVTPEAMNHLIDKKV 290
RDVT EA+ L+ K++
Sbjct: 86 QRDVTIEAVKPLLTKEI 102
>sp|P65406|MOAB_STAAM Molybdenum cofactor biosynthesis protein B OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=moaB PE=1 SV=1
Length = 168
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 217 DKSGPLLAQLLQED---FQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMS 273
DK G + QLLQ D AH T V DE I ++K W+++ +D+I T+GGTG++
Sbjct: 29 DKGGQCVRQLLQADDVEVSDAHY--TIVKDEKVAITTQVKKWLEED-IDVIITTGGTGIA 85
Query: 274 PRDVTPEAMNHLIDKKV 290
RDVT EA+ L+ K++
Sbjct: 86 QRDVTIEAVKPLLTKEI 102
>sp|Q8NV99|MOAB_STAAW Molybdenum cofactor biosynthesis protein B OS=Staphylococcus aureus
(strain MW2) GN=moaB PE=3 SV=1
Length = 168
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 194 ELVRSTCHLLALVSD-RCFNKESEDKSGPLLAQLLQED---FQHAHILKTCVPDEMEEIK 249
+L R+ + VSD R F+ DK G + QLLQ D AH T V DE I
Sbjct: 8 KLNRTVKAAVLTVSDTRDFDT---DKGGQCVRQLLQADDVEVSDAHY--TIVKDEKVAIT 62
Query: 250 DKLKYWVDQSKVDLIFTSGGTGMSPRDVTPEAMNHLIDKKV 290
++K W+++ +D+I T+GGTG++ RDVT EA+ L+ K++
Sbjct: 63 TQVKKWLEED-IDVIITTGGTGIAQRDVTIEAVKPLLTKEI 102
>sp|Q6G747|MOAB_STAAS Molybdenum cofactor biosynthesis protein B OS=Staphylococcus aureus
(strain MSSA476) GN=moaB PE=3 SV=1
Length = 168
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 194 ELVRSTCHLLALVSD-RCFNKESEDKSGPLLAQLLQED---FQHAHILKTCVPDEMEEIK 249
+L R+ + VSD R F+ DK G + QLLQ D AH T V DE I
Sbjct: 8 KLNRTVKAAVLTVSDTRDFDT---DKGGQCVRQLLQADDVEVSDAHY--TIVKDEKVAIT 62
Query: 250 DKLKYWVDQSKVDLIFTSGGTGMSPRDVTPEAMNHLIDKKV 290
++K W+++ +D+I T+GGTG++ RDVT EA+ L+ K++
Sbjct: 63 TQVKKWLEED-IDVIITTGGTGIAQRDVTIEAVKPLLTKEI 102
>sp|Q5HDT2|MOAB_STAAC Molybdenum cofactor biosynthesis protein B OS=Staphylococcus aureus
(strain COL) GN=moaB PE=3 SV=1
Length = 168
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 10/101 (9%)
Query: 194 ELVRSTCHLLALVSD-RCFNKESEDKSGPLLAQLLQED---FQHAHILKTCVPDEMEEIK 249
+L R+ + VSD R F+ DK G + QLLQ D AH T V DE I
Sbjct: 8 KLNRTVKAAVLTVSDTRDFDT---DKGGQCVRQLLQADDVEVSDAHY--TIVKDEKVAIT 62
Query: 250 DKLKYWVDQSKVDLIFTSGGTGMSPRDVTPEAMNHLIDKKV 290
++K W+++ +D+I T+GGTG++ RDVT EA+ L+ K++
Sbjct: 63 TQVKKWLEED-IDVIITTGGTGIAQRDVTIEAVKPLLTKEI 102
>sp|Q9ZIN3|MOAB_STACT Molybdenum cofactor biosynthesis protein B OS=Staphylococcus
carnosus (strain TM300) GN=moaB PE=3 SV=1
Length = 170
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 8/101 (7%)
Query: 217 DKSGPLLAQLLQE---DFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMS 273
DK G L +LL E + + H V D+ + I ++L+ W+ + VD+I T+GGTG++
Sbjct: 31 DKGGNLAKELLSEINVEIKPEHY--AIVKDDKQAITEQLQQWLAED-VDVIITTGGTGIA 87
Query: 274 PRDVTPEAMNHLIDKKVPCIEHIIQ--TEGLKVTPLAMLSR 312
RDVT EA+ L+ K++ + + + V A+LSR
Sbjct: 88 QRDVTIEAVTPLLSKEIEGFGELFRYLSYAEDVGTRALLSR 128
>sp|A4TAK5|CINAL_MYCGI CinA-like protein OS=Mycobacterium gilvum (strain PYR-GCK)
GN=Mflv_3280 PE=3 SV=1
Length = 422
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D +GP LA +LL+ + +HI T D +I+ +L++ DQ VDLI TSGG G +
Sbjct: 20 QDLNGPWLADRLLELGVELSHI--TLCGDRPADIEAQLRFLADQG-VDLIITSGGLGPTA 76
Query: 275 RDVTPEAMNHLIDKKV---PCIEHIIQTEGLKVTPLAMLSRFKGNCPKKWVKLIRRQNVI 331
D+T E ++ +++ P +E I G VT L ++RF P + R+Q +
Sbjct: 77 DDMTVEVVSRFCGRELELDPGLETRI---GEIVTRL--MARFPDVDPAAVIAANRKQAFV 131
Query: 332 P 332
P
Sbjct: 132 P 132
>sp|A1T9F4|CINAL_MYCVP CinA-like protein OS=Mycobacterium vanbaalenii (strain DSM 7251 /
PYR-1) GN=Mvan_2999 PE=3 SV=1
Length = 422
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D++GP LA +LL+ + HI T D +I+ +L++ Q VDLI TSGG G +
Sbjct: 20 QDQNGPWLADRLLELGVELGHI--TLCGDRPADIEAQLRFLAGQG-VDLIITSGGLGPTA 76
Query: 275 RDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKGNCPKKWVKLIRRQNVIP 332
D+T E ++ +++ ++ ++ ++ M++RF G + R+Q ++P
Sbjct: 77 DDMTVEIVSRFCGREL-VLDAAVEARIGEIVK-GMMARFPGVDADAVLAANRKQALVP 132
>sp|O34457|MOAB_BACSU Molybdenum cofactor biosynthesis protein B OS=Bacillus subtilis
(strain 168) GN=moaB PE=3 SV=1
Length = 170
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 18/134 (13%)
Query: 217 DKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSPRD 276
DKSG L+ L+E H + V DE + ++ + + D + +GGTG++ RD
Sbjct: 30 DKSGKLMISFLEEAGHHIAAYE-IVKDEKDALQRSVLAGCMDEQTDAVLLNGGTGIADRD 88
Query: 277 VTPEAMNHLIDKKVPCIEHIIQ----TEGLKVTPLAMLSR-----------FKGNCPKKW 321
VT EA+ L K++P I + TE + A++SR F
Sbjct: 89 VTIEAITPLFSKELPGFGEIFRMLSYTE--DIGSAAIMSRATAGVIQHTAVFSTPGSSGA 146
Query: 322 VKLIRRQNVIPWLG 335
VKL + +IP L
Sbjct: 147 VKLAMNKLIIPELA 160
>sp|P0AEZ9|MOAB_ECOLI Molybdenum cofactor biosynthesis protein B OS=Escherichia coli
(strain K12) GN=moaB PE=1 SV=2
Length = 170
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIF 265
VS+R E +D SG L QE H + K V + I+ ++ W+ V ++
Sbjct: 18 VSNR--RGEEDDTSGHYLRDSAQEAGHHV-VDKAIVKENRYAIRAQVSAWIASDDVQVVL 74
Query: 266 TSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQ 298
+GGTG++ D PEA+ L D++V + +
Sbjct: 75 ITGGTGLTEGDQAPEALLPLFDREVEGFGEVFR 107
>sp|P0AF00|MOAB_ECO57 Molybdenum cofactor biosynthesis protein B OS=Escherichia coli
O157:H7 GN=moaB PE=3 SV=2
Length = 170
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 206 VSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIF 265
VS+R E +D SG L QE H + K V + I+ ++ W+ V ++
Sbjct: 18 VSNR--RGEEDDTSGHYLRDSAQEAGHHV-VDKAIVKENRYAIRAQVSAWIASDDVQVVL 74
Query: 266 TSGGTGMSPRDVTPEAMNHLIDKKVPCIEHIIQ 298
+GGTG++ D PEA+ L D++V + +
Sbjct: 75 ITGGTGLTEGDQAPEALLPLFDREVEGFGEVFR 107
>sp|B2HDA1|CINAL_MYCMM CinA-like protein OS=Mycobacterium marinum (strain ATCC BAA-535 /
M) GN=MMAR_2796 PE=3 SV=1
Length = 425
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D++GP +A QLL+ + AHI T D +I+ +L++ DQ +DLI TSGG G +
Sbjct: 22 QDRNGPWIADQLLELGVELAHI--TICGDRPADIEAQLRFMADQD-LDLIITSGGLGPTA 78
Query: 275 RDVTPEAMNHLIDKKV 290
D+T E + +++
Sbjct: 79 DDMTVEVVARFCGREL 94
>sp|A0QY28|CINAL_MYCS2 CinA-like protein OS=Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155) GN=cinA PE=3 SV=2
Length = 427
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 16/124 (12%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D +GP LA QLL+ + AHI T D +I +LK+ D+ VDLI TSGG G +
Sbjct: 20 QDLNGPWLADQLLELGVELAHI--TICGDRPGDIAAQLKFLADEG-VDLIITSGGLGPTA 76
Query: 275 RDVTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKG--NCPKKWVKLI----RRQ 328
D+T + C ++ E L+ A+L R N ++ + + R+Q
Sbjct: 77 DDLTVATVAEF------CGRELVLDEALEERIAAILRRLTAGRNLSEENFEAVRTANRKQ 130
Query: 329 NVIP 332
+IP
Sbjct: 131 ALIP 134
>sp|Q73ZH8|CINAL_MYCPA CinA-like protein OS=Mycobacterium paratuberculosis (strain ATCC
BAA-968 / K-10) GN=cinA PE=3 SV=1
Length = 434
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D +GP +A +LL+ + AHI T D +I+ +L++ DQ VDLI TSGG G +
Sbjct: 22 QDANGPWIADRLLELGVELAHI--TICGDRPHDIEAQLRFLADQG-VDLIVTSGGLGPTA 78
Query: 275 RDVTPEAMNHLIDKKV 290
D+T E + +++
Sbjct: 79 DDMTVEVVARFCGREL 94
>sp|A0QGE9|CINAL_MYCA1 CinA-like protein OS=Mycobacterium avium (strain 104) GN=MAV_2800
PE=3 SV=1
Length = 434
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D +GP +A +LL+ + AHI T D +I+ +L++ DQ VDLI TSGG G +
Sbjct: 22 QDANGPWIADRLLELGVELAHI--TICGDRPHDIEAQLRFLADQG-VDLIVTSGGLGPTA 78
Query: 275 RDVTPEAMNHLIDKKV 290
D+T E + +++
Sbjct: 79 DDMTVEVVARFCGREL 94
>sp|P63775|CINAL_MYCTU CinA-like protein OS=Mycobacterium tuberculosis GN=cinA PE=3 SV=1
Length = 430
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 203 LALVSDRCFNKESEDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKV 261
+ + +D++GP +A +LL+ + AHI T D +I+ +L++ +Q V
Sbjct: 9 IVITGTEVLTGRVQDRNGPWIADRLLELGVELAHI--TICGDRPADIEAQLRFMAEQG-V 65
Query: 262 DLIFTSGGTGMSPRDVTPEAM 282
DLI TSGG G + D+T E +
Sbjct: 66 DLIVTSGGLGPTADDMTVEVV 86
>sp|A5U3S0|CINAL_MYCTA CinA-like protein OS=Mycobacterium tuberculosis (strain ATCC 25177
/ H37Ra) GN=MRA_1912 PE=3 SV=1
Length = 430
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 203 LALVSDRCFNKESEDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKV 261
+ + +D++GP +A +LL+ + AHI T D +I+ +L++ +Q V
Sbjct: 9 IVITGTEVLTGRVQDRNGPWIADRLLELGVELAHI--TICGDRPADIEAQLRFMAEQG-V 65
Query: 262 DLIFTSGGTGMSPRDVTPEAM 282
DLI TSGG G + D+T E +
Sbjct: 66 DLIVTSGGLGPTADDMTVEVV 86
>sp|C1API1|CINAL_MYCBT CinA-like protein OS=Mycobacterium bovis (strain BCG / Tokyo 172 /
ATCC 35737 / TMC 1019) GN=JTY_1924 PE=3 SV=1
Length = 430
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 203 LALVSDRCFNKESEDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKV 261
+ + +D++GP +A +LL+ + AHI T D +I+ +L++ +Q V
Sbjct: 9 IVITGTEVLTGRVQDRNGPWIADRLLELGVELAHI--TICGDRPADIEAQLRFMAEQG-V 65
Query: 262 DLIFTSGGTGMSPRDVTPEAM 282
DLI TSGG G + D+T E +
Sbjct: 66 DLIVTSGGLGPTADDMTVEVV 86
>sp|A1KJW6|CINAL_MYCBP CinA-like protein OS=Mycobacterium bovis (strain BCG / Pasteur
1173P2) GN=BCG_1940 PE=3 SV=1
Length = 430
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 203 LALVSDRCFNKESEDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKV 261
+ + +D++GP +A +LL+ + AHI T D +I+ +L++ +Q V
Sbjct: 9 IVITGTEVLTGRVQDRNGPWIADRLLELGVELAHI--TICGDRPADIEAQLRFMAEQG-V 65
Query: 262 DLIFTSGGTGMSPRDVTPEAM 282
DLI TSGG G + D+T E +
Sbjct: 66 DLIVTSGGLGPTADDMTVEVV 86
>sp|P63776|CINAL_MYCBO CinA-like protein OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=cinA PE=3 SV=1
Length = 430
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 203 LALVSDRCFNKESEDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKV 261
+ + +D++GP +A +LL+ + AHI T D +I+ +L++ +Q V
Sbjct: 9 IVITGTEVLTGRVQDRNGPWIADRLLELGVELAHI--TICGDRPADIEAQLRFMAEQG-V 65
Query: 262 DLIFTSGGTGMSPRDVTPEAM 282
DLI TSGG G + D+T E +
Sbjct: 66 DLIVTSGGLGPTADDMTVEVV 86
>sp|A7HNE6|CINAL_FERNB CinA-like protein OS=Fervidobacterium nodosum (strain ATCC 35602 /
DSM 5306 / Rt17-B1) GN=Fnod_1586 PE=3 SV=1
Length = 408
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 217 DKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSPRD 276
D + LAQ L+E F + + +PD + + ++K + + DLI TSGG G + D
Sbjct: 20 DTNSKYLAQRLKE-FGYYIVRTETLPDNFDIMVLRIKEAIKDA--DLIITSGGLGPTEDD 76
Query: 277 VTPEAMNHLIDKKVPCIEHIIQTEGLKVTPLAMLSRFKGNCPKKWVK 323
+T EA+ H I +K +++ E + + ++ G P+ VK
Sbjct: 77 LTREAVAHSIGRK------LLKNEAIAQELINRAIKYYGKAPESVVK 117
>sp|Q9X7D6|CINAL_MYCLE CinA-like protein OS=Mycobacterium leprae (strain TN) GN=cinA PE=3
SV=2
Length = 428
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 217 DKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSPR 275
D++GP LA +LL+ + AHI T D +I+ +L++ ++ VDLI TSGG G +
Sbjct: 23 DRNGPWLADRLLELGVKLAHI--TICGDCPADIEAQLRFMA-EAGVDLIVTSGGLGPTAD 79
Query: 276 DVTPEAMNHLIDKKV 290
D+T E + ++++
Sbjct: 80 DMTVEVVARFCNREM 94
>sp|Q8RHR9|CINAL_FUSNN CinA-like protein OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=FN1929 PE=3 SV=1
Length = 402
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 203 LALVSDRCFNKESEDKSGPLLAQLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVD 262
+ LV N + D + +A+ L + + K V D M EI L Y + VD
Sbjct: 5 IFLVGTELLNGATIDTNSIYIAEELNK-YGIEIEFKMTVRDVMSEITKALTYA--KKNVD 61
Query: 263 LIFTSGGTGMSPRDVTPEAMNHLIDKKV 290
L+ +GG G + D+T EAM + KK+
Sbjct: 62 LVILTGGLGPTDDDITKEAMAKFLKKKL 89
>sp|Q1B8H0|CINAL_MYCSS CinA-like protein OS=Mycobacterium sp. (strain MCS) GN=Mmcs_2707
PE=3 SV=1
Length = 421
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D++GP +A +LL+ + AHI T D +I+ +L++ + VDLI TSGG G +
Sbjct: 20 QDRNGPWIADRLLELGVELAHI--TICGDRPADIEAQLRFLAAEG-VDLIVTSGGLGPTA 76
Query: 275 RDVTPEAMNHLIDKKVPCIEHIIQTE 300
D+T + + E I+ TE
Sbjct: 77 DDLTVATVARFCGR-----ELILDTE 97
>sp|A1UGI7|CINAL_MYCSK CinA-like protein OS=Mycobacterium sp. (strain KMS) GN=Mkms_2751
PE=3 SV=1
Length = 421
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D++GP +A +LL+ + AHI T D +I+ +L++ + VDLI TSGG G +
Sbjct: 20 QDRNGPWIADRLLELGVELAHI--TICGDRPADIEAQLRFLAAEG-VDLIVTSGGLGPTA 76
Query: 275 RDVTPEAMNHLIDKKVPCIEHIIQTE 300
D+T + + E I+ TE
Sbjct: 77 DDLTVATVARFCGR-----ELILDTE 97
>sp|A3Q040|CINAL_MYCSJ CinA-like protein OS=Mycobacterium sp. (strain JLS) GN=Mjls_2737
PE=3 SV=1
Length = 421
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 216 EDKSGPLLA-QLLQEDFQHAHILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSP 274
+D++GP +A +LL+ + AHI T D +I+ +L++ + VDLI TSGG G +
Sbjct: 20 QDRNGPWIADRLLELGVELAHI--TICGDRPADIEAQLRFLAAEG-VDLIVTSGGLGPTA 76
Query: 275 RDVTPEAMNHLIDKKVPCIEHIIQTE 300
D+T + + E I+ TE
Sbjct: 77 DDLTVATVARFCGR-----ELILDTE 97
>sp|Q7TUN0|CINAL_PROMM CinA-like protein OS=Prochlorococcus marinus (strain MIT 9313)
GN=PMT_1845 PE=3 SV=1
Length = 429
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 235 HILKTCVPDEMEEIKDKLKYWVDQSKVDLIFTSGGTGMSPRDVTPEAMNHLID 287
H +T V D +E +K+ + VD+S++ + T+GG G +P D+T E + D
Sbjct: 49 HYRQTVVGDNVERLKESVLEAVDRSRI--LITTGGLGPTPDDLTTETLAAAFD 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,674,448
Number of Sequences: 539616
Number of extensions: 5532239
Number of successful extensions: 15289
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 15226
Number of HSP's gapped (non-prelim): 103
length of query: 338
length of database: 191,569,459
effective HSP length: 118
effective length of query: 220
effective length of database: 127,894,771
effective search space: 28136849620
effective search space used: 28136849620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)