Query psy7343
Match_columns 487
No_of_seqs 514 out of 3641
Neff 7.3
Searched_HMMs 29240
Date Sat Aug 17 00:20:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7343.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7343hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vhn_A Putative flavin oxidore 100.0 1E-43 3.5E-48 359.8 25.9 288 148-443 4-307 (318)
2 3b0p_A TRNA-dihydrouridine syn 100.0 4.1E-43 1.4E-47 359.5 25.7 288 148-444 3-316 (350)
3 1z41_A YQJM, probable NADH-dep 99.9 7.4E-27 2.5E-31 238.1 18.2 263 74-374 14-319 (338)
4 2r14_A Morphinone reductase; H 99.9 2.8E-26 9.5E-31 236.6 18.0 274 74-374 20-340 (377)
5 1vyr_A Pentaerythritol tetrani 99.9 2.4E-25 8.2E-30 228.8 20.0 276 74-374 14-335 (364)
6 1jub_A Dihydroorotate dehydrog 99.9 4E-25 1.4E-29 222.6 18.7 219 148-374 12-284 (311)
7 2gou_A Oxidoreductase, FMN-bin 99.9 5.7E-25 2E-29 226.1 19.4 276 74-374 14-334 (365)
8 1icp_A OPR1, 12-oxophytodienoa 99.9 1.4E-25 4.9E-30 231.3 14.8 273 74-374 25-342 (376)
9 2hsa_B 12-oxophytodienoate red 99.9 2.6E-25 8.8E-30 231.1 16.2 274 74-374 27-360 (402)
10 2e6f_A Dihydroorotate dehydrog 99.9 2.4E-24 8.2E-29 217.2 18.3 221 148-374 14-286 (314)
11 3gr7_A NADPH dehydrogenase; fl 99.9 1E-23 3.5E-28 214.7 22.0 159 215-374 143-319 (340)
12 3zwt_A Dihydroorotate dehydrog 99.9 3.5E-24 1.2E-28 219.8 17.1 185 203-401 146-361 (367)
13 3oix_A Putative dihydroorotate 99.9 5.9E-24 2E-28 216.2 18.6 165 201-374 126-317 (345)
14 4ef8_A Dihydroorotate dehydrog 99.9 1.3E-24 4.3E-29 221.7 13.6 167 202-374 125-319 (354)
15 1ps9_A 2,4-dienoyl-COA reducta 99.9 2.2E-23 7.4E-28 230.7 21.3 264 74-374 14-322 (671)
16 1f76_A Dihydroorotate dehydrog 99.9 8.7E-24 3E-28 215.1 16.6 218 148-374 55-331 (336)
17 3i65_A Dihydroorotate dehydrog 99.9 2.7E-23 9.4E-28 214.7 16.4 178 203-394 181-400 (415)
18 1o94_A Tmadh, trimethylamine d 99.9 7.3E-23 2.5E-27 228.5 18.9 160 215-375 148-334 (729)
19 3kru_A NADH:flavin oxidoreduct 99.9 8.7E-23 3E-27 207.8 17.4 161 215-376 142-321 (343)
20 3hgj_A Chromate reductase; TIM 99.9 1.8E-22 6E-27 206.5 19.7 160 215-374 151-330 (349)
21 1ep3_A Dihydroorotate dehydrog 99.9 2.3E-22 7.8E-27 202.0 18.5 164 203-373 98-281 (311)
22 1tv5_A Dhodehase, dihydroorota 99.9 1.8E-22 6.1E-27 211.2 17.4 165 203-374 179-415 (443)
23 3k30_A Histamine dehydrogenase 99.9 8.8E-23 3E-27 226.5 15.5 269 74-375 23-337 (690)
24 3l5l_A Xenobiotic reductase A; 99.9 1.1E-21 3.6E-26 201.7 18.8 160 215-374 157-337 (363)
25 1gte_A Dihydropyrimidine dehyd 99.9 4.9E-21 1.7E-25 220.9 24.3 267 78-394 543-842 (1025)
26 3l5a_A NADH/flavin oxidoreduct 99.8 6.4E-21 2.2E-25 198.8 10.5 158 216-375 170-359 (419)
27 3tjl_A NADPH dehydrogenase; OL 99.8 4E-20 1.4E-24 191.2 13.2 157 216-374 167-358 (407)
28 4ab4_A Xenobiotic reductase B; 99.8 2.5E-20 8.4E-25 190.8 10.6 150 215-375 152-321 (362)
29 2nli_A Lactate oxidase; flavoe 99.8 1.2E-19 4.2E-24 186.4 15.3 201 148-366 80-317 (368)
30 1vhn_A Putative flavin oxidore 99.8 4E-21 1.4E-25 194.1 3.6 205 78-309 4-216 (318)
31 1p0k_A Isopentenyl-diphosphate 99.8 8E-19 2.7E-23 179.4 20.0 207 148-369 55-287 (349)
32 3gka_A N-ethylmaleimide reduct 99.8 4.9E-20 1.7E-24 188.5 11.0 150 215-375 160-329 (361)
33 3b0p_A TRNA-dihydrouridine syn 99.8 3.1E-20 1.1E-24 189.9 6.0 208 78-310 3-229 (350)
34 2nzl_A Hydroxyacid oxidase 1; 99.8 1.1E-18 3.8E-23 180.5 15.3 201 148-367 94-341 (392)
35 3aty_A Tcoye, prostaglandin F2 99.8 5.5E-19 1.9E-23 182.2 12.5 154 214-374 172-348 (379)
36 1gox_A (S)-2-hydroxy-acid oxid 99.8 1.4E-17 4.9E-22 171.4 18.4 200 148-367 71-314 (370)
37 1kbi_A Cytochrome B2, L-LCR; f 99.7 2E-17 6.8E-22 176.6 18.1 203 148-367 189-437 (511)
38 3tjx_A Dihydroorotate dehydrog 99.7 6.2E-17 2.1E-21 165.7 19.4 191 201-404 124-343 (354)
39 1vcf_A Isopentenyl-diphosphate 99.7 5.3E-17 1.8E-21 164.8 14.3 205 148-369 58-292 (332)
40 2z6i_A Trans-2-enoyl-ACP reduc 99.7 1.1E-16 3.7E-21 162.6 15.5 187 148-372 12-201 (332)
41 4a3u_A NCR, NADH\:flavin oxido 99.7 5.7E-17 2E-21 166.1 12.1 156 216-374 152-327 (358)
42 3vkj_A Isopentenyl-diphosphate 99.7 6.6E-16 2.3E-20 158.3 14.3 206 148-367 59-301 (368)
43 4gbu_A NADPH dehydrogenase 1; 99.6 1.1E-14 3.8E-19 151.2 17.7 160 216-375 172-361 (400)
44 1ypf_A GMP reductase; GUAC, pu 99.6 1.8E-14 6.1E-19 146.4 18.1 188 148-368 46-245 (336)
45 1p4c_A L(+)-mandelate dehydrog 99.6 9.4E-15 3.2E-19 150.8 15.8 200 148-368 72-313 (380)
46 2gjl_A Hypothetical protein PA 99.6 2.1E-14 7.3E-19 145.3 17.8 187 148-370 15-209 (328)
47 3bo9_A Putative nitroalkan dio 99.6 3E-14 1E-18 144.1 16.7 184 148-371 26-214 (326)
48 3bw2_A 2-nitropropane dioxygen 99.6 4.3E-14 1.5E-18 145.4 17.3 192 148-372 10-247 (369)
49 3sr7_A Isopentenyl-diphosphate 99.6 4.2E-14 1.4E-18 144.5 16.0 205 148-367 86-312 (365)
50 1mzh_A Deoxyribose-phosphate a 99.5 2.3E-14 7.8E-19 137.6 10.6 180 153-364 13-206 (225)
51 2agk_A 1-(5-phosphoribosyl)-5- 99.5 1.2E-13 4.3E-18 135.2 12.8 181 165-374 44-251 (260)
52 3sgz_A Hydroxyacid oxidase 2; 99.5 5.9E-13 2E-17 135.1 16.0 203 148-368 69-307 (352)
53 3khj_A Inosine-5-monophosphate 99.4 1.4E-12 4.8E-17 133.4 16.6 187 148-371 45-245 (361)
54 1eep_A Inosine 5'-monophosphat 99.4 9.2E-13 3.1E-17 137.1 15.1 141 206-372 144-295 (404)
55 3o07_A Pyridoxine biosynthesis 99.4 8.8E-13 3E-17 127.5 11.1 156 220-395 22-254 (291)
56 1jvn_A Glutamine, bifunctional 99.4 1.1E-12 3.8E-17 141.6 12.3 149 221-374 353-538 (555)
57 2y88_A Phosphoribosyl isomeras 99.4 2.9E-12 1E-16 123.7 13.5 151 203-374 74-237 (244)
58 3r2g_A Inosine 5'-monophosphat 99.3 4.2E-11 1.4E-15 122.0 18.5 187 148-370 42-236 (361)
59 4fo4_A Inosine 5'-monophosphat 99.3 3.6E-11 1.2E-15 123.0 15.3 190 148-371 46-249 (366)
60 2qr6_A IMP dehydrogenase/GMP r 99.3 6.3E-11 2.1E-15 122.8 17.0 202 148-370 67-314 (393)
61 1vzw_A Phosphoribosyl isomeras 99.3 3.6E-11 1.2E-15 116.2 13.2 151 203-373 75-233 (244)
62 2yzr_A Pyridoxal biosynthesis 99.2 6.8E-12 2.3E-16 124.7 7.4 160 219-394 27-295 (330)
63 3tdn_A FLR symmetric alpha-bet 99.2 6.3E-12 2.2E-16 121.9 5.8 151 203-375 79-242 (247)
64 3ffs_A Inosine-5-monophosphate 99.2 2E-10 6.7E-15 118.6 16.9 106 255-370 168-283 (400)
65 1ka9_F Imidazole glycerol phos 99.2 3.9E-10 1.3E-14 109.2 15.0 151 202-373 74-236 (252)
66 1qo2_A Molecule: N-((5-phospho 99.1 3E-10 1E-14 109.6 12.9 121 249-373 102-234 (241)
67 1thf_D HISF protein; thermophI 99.1 7.5E-10 2.6E-14 107.3 15.7 151 202-373 73-235 (253)
68 2w6r_A Imidazole glycerol phos 99.1 7.8E-10 2.7E-14 108.0 14.0 86 286-375 157-242 (266)
69 1jub_A Dihydroorotate dehydrog 99.1 2.6E-10 8.8E-15 114.3 9.2 208 78-309 12-274 (311)
70 1jcn_A Inosine monophosphate d 99.0 1.3E-09 4.6E-14 116.6 14.6 135 216-373 255-398 (514)
71 2c6q_A GMP reductase 2; TIM ba 99.0 6.8E-09 2.3E-13 105.8 19.0 190 148-369 57-259 (351)
72 4fxs_A Inosine-5'-monophosphat 99.0 8.1E-10 2.8E-14 117.6 12.4 130 216-369 231-370 (496)
73 4avf_A Inosine-5'-monophosphat 99.0 1.3E-09 4.4E-14 116.0 13.5 134 212-370 225-369 (490)
74 1y0e_A Putative N-acetylmannos 99.0 1.2E-09 4.1E-14 103.9 11.8 105 258-371 105-212 (223)
75 1h5y_A HISF; histidine biosynt 99.0 5.2E-09 1.8E-13 100.6 14.4 148 203-371 77-236 (253)
76 1yxy_A Putative N-acetylmannos 98.9 3.5E-09 1.2E-13 101.5 11.2 99 258-367 119-220 (234)
77 2qjg_A Putative aldolase MJ040 98.9 8.2E-09 2.8E-13 101.2 13.5 192 148-372 33-247 (273)
78 3q58_A N-acetylmannosamine-6-p 98.9 5.6E-09 1.9E-13 100.1 11.9 104 255-372 114-219 (229)
79 2nv1_A Pyridoxal biosynthesis 98.9 4.9E-09 1.7E-13 104.9 11.4 68 318-394 193-262 (305)
80 2e6f_A Dihydroorotate dehydrog 98.9 3.1E-09 1.1E-13 106.5 9.7 220 75-309 12-276 (314)
81 3tdn_A FLR symmetric alpha-bet 98.9 3E-09 1E-13 103.0 9.1 97 274-374 22-120 (247)
82 1wv2_A Thiazole moeity, thiazo 98.9 2.7E-08 9.1E-13 95.6 15.0 145 203-367 73-221 (265)
83 3igs_A N-acetylmannosamine-6-p 98.9 2.7E-08 9.1E-13 95.6 14.9 103 255-371 114-218 (232)
84 1vrd_A Inosine-5'-monophosphat 98.8 1.7E-08 5.7E-13 107.5 11.4 132 218-372 238-379 (494)
85 3usb_A Inosine-5'-monophosphat 98.8 3.6E-08 1.2E-12 105.3 14.0 140 205-370 246-396 (511)
86 2pgw_A Muconate cycloisomerase 98.8 5.6E-08 1.9E-12 100.2 13.9 141 205-371 138-280 (384)
87 2nli_A Lactate oxidase; flavoe 98.7 2.7E-09 9.2E-14 109.4 2.4 198 78-307 80-314 (368)
88 1f76_A Dihydroorotate dehydrog 98.7 2.2E-08 7.7E-13 101.3 8.7 214 78-308 55-320 (336)
89 2nzl_A Hydroxyacid oxidase 1; 98.7 8.6E-09 2.9E-13 106.5 5.0 194 78-307 94-337 (392)
90 3oix_A Putative dihydroorotate 98.7 4.6E-08 1.6E-12 99.2 10.1 217 74-308 45-306 (345)
91 1qo2_A Molecule: N-((5-phospho 98.7 2.1E-08 7.1E-13 96.6 6.1 96 274-374 13-114 (241)
92 1p0k_A Isopentenyl-diphosphate 98.6 1.8E-07 6.3E-12 95.0 13.3 195 78-307 55-281 (349)
93 2uva_G Fatty acid synthase bet 98.6 2.5E-07 8.4E-12 112.2 16.5 194 146-370 580-803 (2060)
94 1xg4_A Probable methylisocitra 98.6 2.6E-07 8.9E-12 91.5 13.3 152 203-366 78-239 (295)
95 1mdl_A Mandelate racemase; iso 98.6 4.3E-07 1.5E-11 92.6 14.0 140 203-367 133-275 (359)
96 1ep3_A Dihydroorotate dehydrog 98.6 2.2E-08 7.4E-13 99.9 3.9 209 74-308 14-272 (311)
97 2rdx_A Mandelate racemase/muco 98.6 3.8E-07 1.3E-11 93.8 12.9 136 204-368 135-273 (379)
98 2ovl_A Putative racemase; stru 98.5 3.9E-07 1.3E-11 93.4 12.4 131 214-369 146-279 (371)
99 1geq_A Tryptophan synthase alp 98.5 8.1E-07 2.8E-11 85.6 13.9 161 204-368 5-226 (248)
100 1vcf_A Isopentenyl-diphosphate 98.5 1.3E-06 4.6E-11 88.1 14.9 195 78-308 58-287 (332)
101 1wa3_A 2-keto-3-deoxy-6-phosph 98.5 5.2E-07 1.8E-11 84.4 11.0 137 204-367 10-183 (205)
102 2zbt_A Pyridoxal biosynthesis 98.5 1.5E-06 5.2E-11 86.2 14.4 67 319-394 194-262 (297)
103 1thf_D HISF protein; thermophI 98.5 1.5E-07 5.2E-12 90.9 6.6 85 285-373 30-114 (253)
104 2nql_A AGR_PAT_674P, isomerase 98.5 7.1E-07 2.4E-11 92.0 11.5 136 204-365 153-292 (388)
105 2p8b_A Mandelate racemase/muco 98.5 1E-06 3.5E-11 90.1 12.6 139 204-368 131-273 (369)
106 1gox_A (S)-2-hydroxy-acid oxid 98.4 1.2E-07 4.1E-12 97.3 5.4 196 78-307 71-310 (370)
107 4adt_A Pyridoxine biosynthetic 98.4 5.2E-06 1.8E-10 82.3 16.9 68 318-394 193-262 (297)
108 1ka9_F Imidazole glycerol phos 98.4 1.8E-07 6E-12 90.4 6.2 85 285-373 31-115 (252)
109 3eez_A Putative mandelate race 98.4 1E-06 3.5E-11 90.6 11.6 141 202-371 133-276 (378)
110 2qdd_A Mandelate racemase/muco 98.4 9.8E-07 3.3E-11 90.6 11.5 139 203-370 134-275 (378)
111 1ea0_A Glutamate synthase [NAD 98.4 2E-06 6.7E-11 100.1 15.0 110 255-368 976-1099(1479)
112 1kbi_A Cytochrome B2, L-LCR; f 98.4 2.2E-07 7.5E-12 99.1 6.5 193 78-307 189-433 (511)
113 3vnd_A TSA, tryptophan synthas 98.4 2.6E-06 9E-11 83.3 13.2 161 204-366 18-239 (267)
114 1rd5_A Tryptophan synthase alp 98.4 2.4E-06 8.2E-11 83.2 12.5 160 204-368 18-236 (262)
115 2uv8_G Fatty acid synthase sub 98.4 1.4E-06 4.6E-11 105.3 12.8 196 146-371 587-811 (2051)
116 1rvk_A Isomerase/lactonizing e 98.4 3.4E-06 1.1E-10 86.7 14.2 133 213-364 148-284 (382)
117 1ofd_A Ferredoxin-dependent gl 98.4 1.9E-06 6.6E-11 100.4 13.6 112 254-369 1010-1135(1520)
118 1nu5_A Chloromuconate cycloiso 98.4 4E-06 1.4E-10 85.7 14.6 137 205-366 133-273 (370)
119 1qop_A Tryptophan synthase alp 98.4 6.3E-06 2.1E-10 80.7 15.2 161 205-368 18-240 (268)
120 3nav_A Tryptophan synthase alp 98.4 1.7E-06 5.7E-11 84.8 11.0 161 205-367 21-242 (271)
121 2hzg_A Mandelate racemase/muco 98.3 4E-06 1.4E-10 86.7 14.1 144 203-369 133-284 (401)
122 2ps2_A Putative mandelate race 98.3 4.4E-06 1.5E-10 85.5 14.1 137 203-368 135-275 (371)
123 3qja_A IGPS, indole-3-glycerol 98.3 1.3E-05 4.4E-10 78.6 16.5 138 202-371 112-251 (272)
124 3ozy_A Putative mandelate race 98.3 4.9E-06 1.7E-10 85.8 13.9 137 204-366 139-281 (389)
125 1zfj_A Inosine monophosphate d 98.3 3.3E-06 1.1E-10 89.6 12.8 106 256-371 258-374 (491)
126 1tkk_A Similar to chloromucona 98.3 7.7E-06 2.6E-10 83.5 14.7 136 204-364 130-270 (366)
127 3vkj_A Isopentenyl-diphosphate 98.3 5.6E-06 1.9E-10 84.6 13.5 205 74-307 56-297 (368)
128 1tv5_A Dhodehase, dihydroorota 98.3 9.6E-06 3.3E-10 84.7 15.3 100 203-308 296-404 (443)
129 2qgy_A Enolase from the enviro 98.3 5.6E-06 1.9E-10 85.4 13.5 132 212-368 147-281 (391)
130 1ujp_A Tryptophan synthase alp 98.3 5.5E-06 1.9E-10 81.2 12.7 151 213-368 27-235 (271)
131 1h5y_A HISF; histidine biosynt 98.3 6.6E-07 2.2E-11 85.8 5.9 85 285-373 33-117 (253)
132 2y88_A Phosphoribosyl isomeras 98.3 9.1E-07 3.1E-11 84.9 6.6 83 286-373 32-114 (244)
133 4af0_A Inosine-5'-monophosphat 98.3 1.3E-05 4.6E-10 84.4 15.7 128 214-366 279-417 (556)
134 2qr6_A IMP dehydrogenase/GMP r 98.2 6E-06 2E-10 85.2 12.4 102 255-365 140-242 (393)
135 4ef8_A Dihydroorotate dehydrog 98.2 1.6E-06 5.5E-11 88.1 7.9 127 176-309 165-309 (354)
136 4gj1_A 1-(5-phosphoribosyl)-5- 98.2 4.8E-06 1.6E-10 80.4 10.8 116 249-369 104-231 (243)
137 2z6i_A Trans-2-enoyl-ACP reduc 98.2 1.7E-05 5.7E-10 80.0 15.3 180 78-308 12-193 (332)
138 3zwt_A Dihydroorotate dehydrog 98.2 4.6E-07 1.6E-11 92.7 3.7 126 176-309 186-330 (367)
139 1vzw_A Phosphoribosyl isomeras 98.2 1.1E-06 3.9E-11 84.4 6.1 83 286-373 33-115 (244)
140 3f4w_A Putative hexulose 6 pho 98.2 7.9E-06 2.7E-10 76.6 11.7 105 257-370 90-195 (211)
141 2htm_A Thiazole biosynthesis p 98.2 1.3E-05 4.3E-10 77.3 13.1 145 203-367 63-212 (268)
142 2gl5_A Putative dehydratase pr 98.2 7.8E-06 2.7E-10 84.8 12.3 137 214-361 150-298 (410)
143 2w6r_A Imidazole glycerol phos 98.2 2.9E-06 9.9E-11 82.5 8.4 86 285-374 30-118 (266)
144 2v82_A 2-dehydro-3-deoxy-6-pho 98.2 1.4E-05 4.8E-10 75.0 12.3 137 202-368 5-182 (212)
145 2qde_A Mandelate racemase/muco 98.2 1.5E-05 5E-10 82.4 13.1 133 204-362 135-270 (397)
146 3cwo_X Beta/alpha-barrel prote 98.1 6.4E-06 2.2E-10 77.4 9.4 85 285-373 130-214 (237)
147 2og9_A Mandelate racemase/muco 98.1 1.3E-05 4.5E-10 82.7 12.4 124 214-362 162-288 (393)
148 2poz_A Putative dehydratase; o 98.1 6.3E-06 2.2E-10 85.0 9.5 140 212-361 135-279 (392)
149 3stp_A Galactonate dehydratase 98.1 2.1E-05 7.1E-10 81.7 13.1 141 203-362 167-311 (412)
150 3tsm_A IGPS, indole-3-glycerol 98.1 6E-05 2E-09 73.7 15.5 138 202-371 119-258 (272)
151 1h1y_A D-ribulose-5-phosphate 98.1 5.2E-05 1.8E-09 72.2 14.7 143 203-370 64-209 (228)
152 3ngj_A Deoxyribose-phosphate a 98.1 1.6E-05 5.5E-10 76.1 10.9 129 218-364 98-231 (239)
153 2oz8_A MLL7089 protein; struct 98.1 3.6E-05 1.2E-09 79.2 14.3 123 214-362 145-273 (389)
154 2ekc_A AQ_1548, tryptophan syn 98.1 3.7E-05 1.3E-09 74.9 13.2 152 213-368 28-240 (262)
155 3vk5_A MOEO5; TIM barrel, tran 98.1 1.2E-05 4.2E-10 78.3 9.6 78 288-374 189-270 (286)
156 2ox4_A Putative mandelate race 98.1 1.3E-05 4.6E-10 82.8 10.6 136 214-362 146-290 (403)
157 3zen_D Fatty acid synthase; tr 98.1 7.8E-06 2.7E-10 102.2 10.2 193 146-370 425-654 (3089)
158 4gj1_A 1-(5-phosphoribosyl)-5- 98.1 5.2E-06 1.8E-10 80.1 6.9 86 285-374 31-116 (243)
159 1xm3_A Thiazole biosynthesis p 98.0 2.4E-05 8.3E-10 76.3 11.7 144 204-369 66-214 (264)
160 2pp0_A L-talarate/galactarate 98.0 2.6E-05 9E-10 80.5 12.4 123 214-361 175-300 (398)
161 3rcy_A Mandelate racemase/muco 98.0 2.9E-05 1E-09 81.1 12.7 137 213-362 145-284 (433)
162 1tzz_A Hypothetical protein L1 98.0 4E-05 1.4E-09 79.0 13.1 124 214-362 165-295 (392)
163 1w8s_A FBP aldolase, fructose- 98.0 4.7E-05 1.6E-09 74.3 12.8 105 256-371 120-240 (263)
164 3rr1_A GALD, putative D-galact 98.0 3.1E-05 1.1E-09 80.2 12.1 143 203-362 114-259 (405)
165 2gdq_A YITF; mandelate racemas 98.0 3.2E-05 1.1E-09 79.4 12.1 124 213-361 135-265 (382)
166 3oa3_A Aldolase; structural ge 98.0 7.2E-05 2.5E-09 73.3 13.8 128 218-363 129-264 (288)
167 1yad_A Regulatory protein TENI 98.0 2.1E-05 7.1E-10 74.4 9.7 81 286-370 119-200 (221)
168 1me8_A Inosine-5'-monophosphat 98.0 2.8E-05 9.5E-10 82.8 11.5 102 259-368 270-387 (503)
169 2o56_A Putative mandelate race 98.0 2.5E-05 8.5E-10 80.9 10.8 135 214-361 152-295 (407)
170 1p4c_A L(+)-mandelate dehydrog 98.0 4.3E-06 1.5E-10 86.0 4.9 196 78-308 72-309 (380)
171 3r12_A Deoxyribose-phosphate a 98.0 7.5E-05 2.6E-09 72.2 13.1 127 219-363 115-246 (260)
172 3ndo_A Deoxyribose-phosphate a 98.0 7.1E-05 2.4E-09 71.3 12.7 128 218-363 83-220 (231)
173 2tps_A Protein (thiamin phosph 97.9 4.1E-05 1.4E-09 72.3 10.9 81 285-369 124-207 (227)
174 3sjn_A Mandelate racemase/muco 97.9 3.5E-05 1.2E-09 79.0 11.1 126 214-362 146-275 (374)
175 3bjs_A Mandelate racemase/muco 97.9 3.5E-05 1.2E-09 80.4 10.9 123 213-361 183-310 (428)
176 2zad_A Muconate cycloisomerase 97.9 0.00014 4.8E-09 73.5 15.1 132 204-361 129-264 (345)
177 3bo9_A Putative nitroalkan dio 97.9 0.00012 4.2E-09 73.5 14.4 179 78-308 26-207 (326)
178 1xi3_A Thiamine phosphate pyro 97.9 6.8E-05 2.3E-09 70.1 11.6 81 286-370 117-198 (215)
179 2qq6_A Mandelate racemase/muco 97.9 5.1E-05 1.8E-09 78.6 11.8 133 214-361 149-290 (410)
180 3jva_A Dipeptide epimerase; en 97.9 8.7E-05 3E-09 75.4 13.2 136 205-366 130-268 (354)
181 3gka_A N-ethylmaleimide reduct 97.9 0.00012 4E-09 74.6 14.0 97 186-308 207-318 (361)
182 3r4e_A Mandelate racemase/muco 97.9 3.7E-05 1.3E-09 79.9 10.2 151 202-362 131-301 (418)
183 4ab4_A Xenobiotic reductase B; 97.9 2.9E-05 1E-09 79.1 8.9 111 186-330 199-324 (362)
184 3i4k_A Muconate lactonizing en 97.9 0.00016 5.5E-09 74.2 14.4 136 204-364 138-277 (383)
185 4e5t_A Mandelate racemase / mu 97.9 6.1E-05 2.1E-09 77.9 11.3 136 213-362 150-289 (404)
186 3tha_A Tryptophan synthase alp 97.9 2.7E-05 9.2E-10 75.2 8.0 150 213-367 25-232 (252)
187 3ro6_B Putative chloromuconate 97.9 5.1E-05 1.8E-09 77.2 10.5 136 203-364 129-268 (356)
188 2yw3_A 4-hydroxy-2-oxoglutarat 97.9 3.1E-05 1E-09 72.9 8.1 81 270-367 103-184 (207)
189 3sbf_A Mandelate racemase / mu 97.8 6.2E-05 2.1E-09 77.8 10.8 151 203-363 122-283 (401)
190 1rpx_A Protein (ribulose-phosp 97.8 0.00012 4E-09 69.6 11.8 146 206-370 13-215 (230)
191 1ub3_A Aldolase protein; schif 97.8 0.00014 4.9E-09 68.9 12.1 129 219-365 75-210 (220)
192 2gjl_A Hypothetical protein PA 97.8 0.00066 2.3E-08 68.0 17.2 186 78-308 15-203 (328)
193 3my9_A Muconate cycloisomerase 97.8 0.00045 1.5E-08 70.7 15.8 134 204-362 136-272 (377)
194 3vzx_A Heptaprenylglyceryl pho 97.8 4.4E-05 1.5E-09 72.6 7.6 78 286-373 141-219 (228)
195 4dwd_A Mandelate racemase/muco 97.8 0.00022 7.6E-09 73.5 13.4 140 203-362 125-271 (393)
196 2hxt_A L-fuconate dehydratase; 97.7 0.00011 3.8E-09 76.8 11.1 124 212-361 196-323 (441)
197 1tqj_A Ribulose-phosphate 3-ep 97.7 0.00015 5E-09 69.3 10.8 143 203-370 62-209 (230)
198 4e4u_A Mandalate racemase/muco 97.7 0.00014 4.7E-09 75.5 11.3 136 213-362 143-282 (412)
199 3q45_A Mandelate racemase/muco 97.7 0.00031 1.1E-08 71.7 13.7 133 205-363 131-266 (368)
200 2cu0_A Inosine-5'-monophosphat 97.7 5.7E-05 2E-09 80.0 8.4 98 259-368 256-363 (486)
201 1chr_A Chloromuconate cycloiso 97.7 0.00032 1.1E-08 71.6 13.6 135 204-363 132-270 (370)
202 1mzh_A Deoxyribose-phosphate a 97.7 0.00011 3.9E-09 69.8 9.4 178 81-304 11-203 (225)
203 1ypf_A GMP reductase; GUAC, pu 97.7 0.00033 1.1E-08 70.7 13.3 188 78-310 46-243 (336)
204 2p10_A MLL9387 protein; putati 97.7 6.9E-05 2.4E-09 72.9 7.8 163 195-369 87-266 (286)
205 1gte_A Dihydropyrimidine dehyd 97.7 1.3E-05 4.5E-10 92.5 3.2 190 100-310 599-820 (1025)
206 3o63_A Probable thiamine-phosp 97.7 0.00012 4E-09 70.6 9.0 84 284-371 142-228 (243)
207 3bw2_A 2-nitropropane dioxygen 97.7 0.00047 1.6E-08 70.3 14.1 197 78-309 10-240 (369)
208 3ajx_A 3-hexulose-6-phosphate 97.7 0.0014 4.7E-08 60.9 16.2 139 203-370 53-194 (207)
209 3v3w_A Starvation sensing prot 97.6 0.00024 8.2E-09 74.0 11.7 150 203-362 138-307 (424)
210 3inp_A D-ribulose-phosphate 3- 97.6 0.00023 7.8E-09 68.6 10.6 146 205-369 29-230 (246)
211 3vcn_A Mannonate dehydratase; 97.6 0.00017 5.9E-09 75.1 10.6 150 203-362 139-308 (425)
212 3ddm_A Putative mandelate race 97.6 0.00015 5.1E-09 74.8 9.8 125 212-362 153-281 (392)
213 1tqx_A D-ribulose-5-phosphate 97.6 0.00042 1.4E-08 66.0 12.2 176 167-370 26-209 (227)
214 1vc4_A Indole-3-glycerol phosp 97.6 0.00014 4.6E-09 70.6 8.8 136 202-371 105-245 (254)
215 1i4n_A Indole-3-glycerol phosp 97.6 0.00069 2.4E-08 65.4 13.5 138 201-371 99-239 (251)
216 2fli_A Ribulose-phosphate 3-ep 97.6 0.00018 6.1E-09 67.6 9.2 152 190-370 50-206 (220)
217 1sjd_A N-acylamino acid racema 97.6 0.00037 1.3E-08 71.0 12.2 120 213-361 140-262 (368)
218 3ovp_A Ribulose-phosphate 3-ep 97.6 0.00067 2.3E-08 64.6 13.2 172 168-370 26-205 (228)
219 3sr7_A Isopentenyl-diphosphate 97.6 0.00042 1.4E-08 70.6 12.2 195 78-308 86-309 (365)
220 3ugv_A Enolase; enzyme functio 97.6 0.00076 2.6E-08 69.4 14.1 134 204-362 158-300 (390)
221 3tji_A Mandelate racemase/muco 97.6 0.00017 5.7E-09 75.1 9.2 151 203-363 143-304 (422)
222 3i65_A Dihydroorotate dehydrog 97.6 0.00013 4.4E-09 75.4 8.1 121 182-308 225-376 (415)
223 3tj4_A Mandelate racemase; eno 97.6 0.00066 2.3E-08 69.3 13.4 123 214-361 151-277 (372)
224 3gd6_A Muconate cycloisomerase 97.6 0.00038 1.3E-08 71.6 11.6 137 204-368 128-274 (391)
225 3toy_A Mandelate racemase/muco 97.5 0.001 3.5E-08 68.3 14.7 133 204-361 157-293 (383)
226 3i6e_A Muconate cycloisomerase 97.5 0.0012 4.2E-08 67.7 15.0 134 204-362 138-273 (385)
227 3dg3_A Muconate cycloisomerase 97.5 0.00066 2.3E-08 69.2 12.9 132 204-361 129-265 (367)
228 3ih1_A Methylisocitrate lyase; 97.5 0.003 1E-07 62.6 16.5 147 203-364 89-245 (305)
229 1viz_A PCRB protein homolog; s 97.5 7.6E-05 2.6E-09 71.7 4.9 54 319-374 168-223 (240)
230 3r0u_A Enzyme of enolase super 97.5 0.0014 4.9E-08 67.0 14.6 134 204-363 132-270 (379)
231 3fv9_G Mandelate racemase/muco 97.5 0.0011 3.6E-08 68.2 13.4 138 202-363 133-274 (386)
232 1vcv_A Probable deoxyribose-ph 97.5 0.0018 6.3E-08 61.4 13.9 134 217-363 69-221 (226)
233 3kts_A Glycerol uptake operon 97.4 0.00063 2.1E-08 62.9 10.3 86 271-369 101-186 (192)
234 3w01_A Heptaprenylglyceryl pho 97.4 0.00011 3.7E-09 70.1 4.4 69 297-375 158-227 (235)
235 1vhc_A Putative KHG/KDPG aldol 97.4 0.00057 2E-08 64.9 9.4 92 262-371 102-194 (224)
236 2f6u_A GGGPS, (S)-3-O-geranylg 97.4 0.00023 7.9E-09 68.0 6.6 73 289-371 149-227 (234)
237 1r0m_A N-acylamino acid racema 97.3 0.00099 3.4E-08 68.0 11.4 120 213-361 147-268 (375)
238 3t6c_A RSPA, putative MAND fam 97.3 0.0012 4.1E-08 69.0 11.9 151 203-363 144-322 (440)
239 3go2_A Putative L-alanine-DL-g 97.3 0.00093 3.2E-08 69.1 10.9 137 213-362 142-292 (409)
240 3l5a_A NADH/flavin oxidoreduct 97.3 0.0014 4.6E-08 68.1 12.0 95 201-308 240-348 (419)
241 1jvn_A Glutamine, bifunctional 97.3 0.00019 6.5E-09 77.3 5.5 82 286-368 281-373 (555)
242 4e4f_A Mannonate dehydratase; 97.3 0.00055 1.9E-08 71.3 8.7 149 203-361 138-308 (426)
243 3ceu_A Thiamine phosphate pyro 97.3 0.00066 2.2E-08 63.7 8.5 81 285-370 96-180 (210)
244 3dgb_A Muconate cycloisomerase 97.3 0.0025 8.6E-08 65.3 13.5 135 204-363 138-276 (382)
245 2zc8_A N-acylamino acid racema 97.3 0.0015 5E-08 66.5 11.7 120 213-361 140-261 (369)
246 3mqt_A Mandelate racemase/muco 97.2 0.0016 5.3E-08 67.1 11.4 99 255-363 182-283 (394)
247 3tcs_A Racemase, putative; PSI 97.2 0.0032 1.1E-07 64.6 13.5 131 214-362 146-280 (388)
248 4e8g_A Enolase, mandelate race 97.2 0.0026 9E-08 65.3 12.7 132 204-363 154-289 (391)
249 3glc_A Aldolase LSRF; TIM barr 97.2 0.0018 6E-08 64.0 10.8 96 259-369 160-264 (295)
250 3fcp_A L-Ala-D/L-Glu epimerase 97.2 0.0067 2.3E-07 62.0 15.6 135 204-363 137-275 (381)
251 2agk_A 1-(5-phosphoribosyl)-5- 97.2 0.0002 7E-09 69.6 3.9 77 285-373 38-119 (260)
252 3mkc_A Racemase; metabolic pro 97.2 0.0018 6E-08 66.7 11.1 98 255-362 187-287 (394)
253 3mwc_A Mandelate racemase/muco 97.2 0.0025 8.6E-08 65.7 12.1 132 204-364 150-287 (400)
254 1pii_A N-(5'phosphoribosyl)ant 97.1 0.0052 1.8E-07 64.1 14.4 136 203-371 108-245 (452)
255 4a29_A Engineered retro-aldol 97.1 0.013 4.6E-07 56.2 15.7 139 201-371 102-242 (258)
256 3jr2_A Hexulose-6-phosphate sy 97.1 0.0015 5E-08 61.6 8.9 112 240-368 85-200 (218)
257 1n7k_A Deoxyribose-phosphate a 97.1 0.0026 9.1E-08 60.6 10.5 76 284-366 147-227 (234)
258 3ctl_A D-allulose-6-phosphate 97.1 0.0023 7.8E-08 61.0 10.0 142 203-370 57-204 (231)
259 1p1x_A Deoxyribose-phosphate a 97.0 0.0019 6.6E-08 62.5 9.4 123 218-357 88-222 (260)
260 2a4a_A Deoxyribose-phosphate a 97.0 0.0021 7.2E-08 62.8 9.6 122 218-357 109-249 (281)
261 1to3_A Putative aldolase YIHT; 97.0 0.0023 7.9E-08 63.5 10.1 102 257-368 142-260 (304)
262 4e38_A Keto-hydroxyglutarate-a 97.0 0.0026 8.8E-08 60.6 9.8 85 271-373 127-212 (232)
263 1vkf_A Glycerol uptake operon 97.0 0.0013 4.3E-08 60.5 7.2 103 259-368 45-183 (188)
264 1qap_A Quinolinic acid phospho 96.9 0.0049 1.7E-07 60.9 11.3 92 259-371 195-289 (296)
265 3p3b_A Mandelate racemase/muco 96.9 0.0012 4E-08 68.0 7.1 125 216-361 150-284 (392)
266 1wbh_A KHG/KDPG aldolase; lyas 96.9 0.011 3.7E-07 55.6 13.3 85 270-371 108-193 (214)
267 4eiv_A Deoxyribose-phosphate a 96.9 0.003 1E-07 61.7 9.4 133 217-373 102-268 (297)
268 3eoo_A Methylisocitrate lyase; 96.9 0.0052 1.8E-07 60.7 11.3 148 203-365 83-242 (298)
269 3khj_A Inosine-5-monophosphate 96.9 0.0033 1.1E-07 64.0 10.1 95 255-362 79-173 (361)
270 3gr7_A NADPH dehydrogenase; fl 96.9 0.0018 6E-08 65.4 8.0 126 186-332 190-325 (340)
271 2ze3_A DFA0005; organic waste 96.9 0.018 6.2E-07 56.2 14.7 139 203-364 76-234 (275)
272 3kru_A NADH:flavin oxidoreduct 96.9 0.0066 2.3E-07 61.2 11.9 110 186-308 189-309 (343)
273 3b8i_A PA4872 oxaloacetate dec 96.9 0.039 1.3E-06 54.1 17.0 149 201-364 80-236 (287)
274 4hnl_A Mandelate racemase/muco 96.8 0.0051 1.8E-07 63.7 11.3 149 203-361 142-301 (421)
275 1q6o_A Humps, 3-keto-L-gulonat 96.8 0.017 5.7E-07 54.1 13.7 139 204-370 59-199 (216)
276 3ik4_A Mandelate racemase/muco 96.8 0.013 4.6E-07 59.4 14.0 134 204-362 133-270 (365)
277 1nsj_A PRAI, phosphoribosyl an 96.8 0.031 1.1E-06 52.1 15.3 182 157-371 7-189 (205)
278 2b7n_A Probable nicotinate-nuc 96.8 0.0029 1E-07 61.8 8.5 91 260-371 169-266 (273)
279 2hjp_A Phosphonopyruvate hydro 96.8 0.071 2.4E-06 52.4 18.2 149 201-365 73-238 (290)
280 1s2w_A Phosphoenolpyruvate pho 96.8 0.03 1E-06 55.2 15.6 146 202-364 78-240 (295)
281 3lye_A Oxaloacetate acetyl hyd 96.8 0.02 6.8E-07 56.7 14.2 144 203-363 88-248 (307)
282 3hgj_A Chromate reductase; TIM 96.7 0.0068 2.3E-07 61.3 10.2 114 199-332 215-336 (349)
283 3e96_A Dihydrodipicolinate syn 96.6 0.0079 2.7E-07 60.0 10.5 121 214-351 31-158 (316)
284 1zlp_A PSR132, petal death pro 96.6 0.016 5.6E-07 57.6 12.6 145 203-365 101-260 (318)
285 1eep_A Inosine 5'-monophosphat 96.6 0.026 9E-07 58.0 14.6 90 203-308 194-287 (404)
286 2czd_A Orotidine 5'-phosphate 96.6 0.025 8.6E-07 52.6 13.1 71 286-369 120-192 (208)
287 4a35_A Mitochondrial enolase s 96.6 0.017 5.7E-07 60.3 13.0 125 212-362 199-329 (441)
288 2h6r_A Triosephosphate isomera 96.6 0.0058 2E-07 57.7 8.6 106 257-371 98-208 (219)
289 3dip_A Enolase; structural gen 96.6 0.0062 2.1E-07 63.0 9.6 98 256-362 196-295 (410)
290 1z41_A YQJM, probable NADH-dep 96.6 0.0046 1.6E-07 62.2 8.1 111 186-309 190-310 (338)
291 2vc6_A MOSA, dihydrodipicolina 96.5 0.016 5.6E-07 57.0 11.8 123 214-352 19-152 (292)
292 1vc4_A Indole-3-glycerol phosp 96.5 0.014 4.9E-07 56.2 11.1 94 265-367 40-140 (254)
293 3lab_A Putative KDPG (2-keto-3 96.5 0.011 3.6E-07 55.7 9.8 152 203-373 12-197 (217)
294 3tsm_A IGPS, indole-3-glycerol 96.5 0.012 4.3E-07 57.2 10.5 77 284-367 78-154 (272)
295 3cu2_A Ribulose-5-phosphate 3- 96.5 0.0049 1.7E-07 58.9 7.3 133 207-368 73-223 (237)
296 2jbm_A Nicotinate-nucleotide p 96.4 0.0052 1.8E-07 60.8 7.5 91 260-371 184-281 (299)
297 1v5x_A PRA isomerase, phosphor 96.4 0.087 3E-06 49.0 15.5 192 157-392 6-198 (203)
298 1x1o_A Nicotinate-nucleotide p 96.4 0.016 5.6E-07 56.8 10.6 91 260-371 183-277 (286)
299 3l21_A DHDPS, dihydrodipicolin 96.4 0.02 6.9E-07 56.7 11.4 123 214-352 34-167 (304)
300 4dxk_A Mandelate racemase / mu 96.4 0.0072 2.5E-07 62.2 8.3 98 255-362 192-291 (400)
301 2rfg_A Dihydrodipicolinate syn 96.4 0.021 7.3E-07 56.3 11.4 123 214-352 19-152 (297)
302 2v9d_A YAGE; dihydrodipicolini 96.3 0.028 9.7E-07 56.6 12.4 122 214-351 50-182 (343)
303 3fa4_A 2,3-dimethylmalate lyas 96.3 0.084 2.9E-06 52.0 15.3 148 202-364 79-241 (302)
304 2ehh_A DHDPS, dihydrodipicolin 96.3 0.038 1.3E-06 54.4 12.9 122 214-351 19-151 (294)
305 3k30_A Histamine dehydrogenase 96.3 0.0059 2E-07 67.2 7.7 112 186-308 203-326 (690)
306 3d0c_A Dihydrodipicolinate syn 96.3 0.018 6.1E-07 57.3 10.5 120 214-351 31-158 (314)
307 1xky_A Dihydrodipicolinate syn 96.3 0.029 1E-06 55.4 12.0 123 214-352 31-164 (301)
308 2r8w_A AGR_C_1641P; APC7498, d 96.3 0.026 9E-07 56.6 11.7 123 214-352 53-186 (332)
309 1o5k_A DHDPS, dihydrodipicolin 96.2 0.034 1.2E-06 55.0 12.1 122 214-351 31-163 (306)
310 3c2e_A Nicotinate-nucleotide p 96.2 0.005 1.7E-07 60.8 5.9 92 259-371 185-286 (294)
311 2yxg_A DHDPS, dihydrodipicolin 96.2 0.036 1.2E-06 54.4 12.1 122 214-351 19-151 (289)
312 3l5l_A Xenobiotic reductase A; 96.2 0.0091 3.1E-07 60.7 7.7 113 200-332 222-343 (363)
313 3qze_A DHDPS, dihydrodipicolin 96.1 0.037 1.3E-06 55.0 11.7 122 214-351 42-174 (314)
314 3na8_A Putative dihydrodipicol 96.1 0.043 1.5E-06 54.6 12.1 121 214-350 43-174 (315)
315 1o4u_A Type II quinolic acid p 96.1 0.01 3.4E-07 58.3 7.3 92 259-371 179-277 (285)
316 1o94_A Tmadh, trimethylamine d 96.1 0.0083 2.8E-07 66.5 7.4 226 74-308 18-323 (729)
317 4dye_A Isomerase; enolase fami 96.1 0.039 1.3E-06 56.7 11.9 121 215-363 169-292 (398)
318 3m5v_A DHDPS, dihydrodipicolin 96.1 0.096 3.3E-06 51.6 14.3 124 214-353 26-161 (301)
319 3s5o_A 4-hydroxy-2-oxoglutarat 96.0 0.061 2.1E-06 53.2 12.9 123 214-352 33-168 (307)
320 1vyr_A Pentaerythritol tetrani 96.0 0.015 5.2E-07 59.1 8.6 104 186-309 207-326 (364)
321 3flu_A DHDPS, dihydrodipicolin 96.0 0.041 1.4E-06 54.2 11.5 122 214-351 26-158 (297)
322 3nl6_A Thiamine biosynthetic b 96.0 0.022 7.4E-07 60.9 10.1 82 286-370 117-217 (540)
323 1mxs_A KDPG aldolase; 2-keto-3 96.0 0.0058 2E-07 58.0 5.1 86 269-371 117-203 (225)
324 3si9_A DHDPS, dihydrodipicolin 96.0 0.048 1.6E-06 54.2 12.0 123 214-352 41-174 (315)
325 2wkj_A N-acetylneuraminate lya 96.0 0.037 1.3E-06 54.7 11.1 123 214-352 30-164 (303)
326 3cpr_A Dihydrodipicolinate syn 96.0 0.04 1.4E-06 54.5 11.3 122 214-351 35-167 (304)
327 3qja_A IGPS, indole-3-glycerol 96.0 0.027 9.3E-07 54.9 9.8 77 285-368 72-148 (272)
328 3lab_A Putative KDPG (2-keto-3 96.0 0.041 1.4E-06 51.6 10.6 79 272-361 13-91 (217)
329 3exr_A RMPD (hexulose-6-phosph 95.9 0.044 1.5E-06 51.6 10.8 153 189-369 45-203 (221)
330 3r2g_A Inosine 5'-monophosphat 95.9 0.018 6.2E-07 58.3 8.6 70 285-362 99-169 (361)
331 1f6k_A N-acetylneuraminate lya 95.9 0.042 1.4E-06 54.0 11.1 123 214-352 22-156 (293)
332 3daq_A DHDPS, dihydrodipicolin 95.9 0.044 1.5E-06 53.9 11.2 123 214-352 21-154 (292)
333 2r14_A Morphinone reductase; H 95.9 0.017 6E-07 58.9 8.5 105 186-309 212-331 (377)
334 3eb2_A Putative dihydrodipicol 95.9 0.044 1.5E-06 54.1 11.2 122 214-351 23-155 (300)
335 3b4u_A Dihydrodipicolinate syn 95.9 0.064 2.2E-06 52.7 12.3 122 214-351 22-158 (294)
336 4fo4_A Inosine 5'-monophosphat 95.9 0.034 1.2E-06 56.5 10.4 97 255-362 80-177 (366)
337 2yzr_A Pyridoxal biosynthesis 95.8 0.016 5.5E-07 57.5 7.6 72 261-351 230-304 (330)
338 3tak_A DHDPS, dihydrodipicolin 95.8 0.049 1.7E-06 53.5 11.0 122 214-351 20-152 (291)
339 4aaj_A N-(5'-phosphoribosyl)an 95.8 0.68 2.3E-05 43.7 18.4 102 254-367 102-207 (228)
340 2ojp_A DHDPS, dihydrodipicolin 95.8 0.034 1.2E-06 54.6 9.6 122 214-351 20-152 (292)
341 2pge_A MENC; OSBS, NYSGXRC, PS 95.8 0.077 2.6E-06 54.0 12.6 133 204-361 152-290 (377)
342 1icp_A OPR1, 12-oxophytodienoa 95.7 0.014 4.8E-07 59.6 6.9 106 186-309 213-333 (376)
343 2hsa_B 12-oxophytodienoate red 95.7 0.02 6.8E-07 59.0 7.9 113 186-308 217-350 (402)
344 3a5f_A Dihydrodipicolinate syn 95.7 0.034 1.2E-06 54.7 9.2 122 214-351 20-152 (291)
345 3h5d_A DHDPS, dihydrodipicolin 95.6 0.075 2.6E-06 52.7 11.4 123 214-352 26-160 (311)
346 2chr_A Chloromuconate cycloiso 95.6 0.15 5.1E-06 51.5 13.9 131 205-360 133-267 (370)
347 3fkr_A L-2-keto-3-deoxyarabona 95.6 0.048 1.6E-06 54.0 9.9 123 214-352 27-162 (309)
348 2qiw_A PEP phosphonomutase; st 95.6 0.13 4.6E-06 49.4 12.6 139 203-364 80-238 (255)
349 1ps9_A 2,4-dienoyl-COA reducta 95.5 0.024 8.1E-07 62.1 8.3 113 186-308 187-312 (671)
350 4e38_A Keto-hydroxyglutarate-a 95.5 0.062 2.1E-06 51.0 10.1 79 273-362 35-113 (232)
351 3qfe_A Putative dihydrodipicol 95.5 0.06 2E-06 53.6 10.3 123 214-352 30-166 (318)
352 2gou_A Oxidoreductase, FMN-bin 95.4 0.024 8.3E-07 57.6 7.4 103 186-308 207-324 (365)
353 3u9i_A Mandelate racemase/muco 95.4 0.11 3.9E-06 53.1 12.4 140 205-361 156-299 (393)
354 3dz1_A Dihydrodipicolinate syn 95.4 0.12 3.9E-06 51.4 11.9 125 214-352 27-160 (313)
355 4hpn_A Putative uncharacterize 95.3 0.12 4.3E-06 52.3 12.2 96 255-360 170-267 (378)
356 1qpo_A Quinolinate acid phosph 95.3 0.05 1.7E-06 53.3 8.7 95 260-371 182-278 (284)
357 3q58_A N-acetylmannosamine-6-p 95.2 0.37 1.3E-05 45.5 14.5 118 213-361 33-155 (229)
358 3s5s_A Mandelate racemase/muco 95.2 0.097 3.3E-06 53.5 11.1 134 205-361 135-270 (389)
359 1wuf_A Hypothetical protein LI 95.2 0.11 3.8E-06 53.1 11.6 128 205-361 151-281 (393)
360 2qjg_A Putative aldolase MJ040 95.2 0.16 5.4E-06 48.9 12.0 189 79-309 34-240 (273)
361 1o66_A 3-methyl-2-oxobutanoate 95.2 0.21 7.3E-06 48.4 12.7 150 158-339 23-203 (275)
362 3paj_A Nicotinate-nucleotide p 95.2 0.1 3.5E-06 51.8 10.6 85 260-365 219-306 (320)
363 3ih1_A Methylisocitrate lyase; 95.1 0.16 5.5E-06 50.1 11.8 106 254-361 72-194 (305)
364 1oy0_A Ketopantoate hydroxymet 95.1 0.3 1E-05 47.6 13.4 94 214-339 110-221 (281)
365 3tqv_A Nicotinate-nucleotide p 95.1 0.072 2.4E-06 52.1 9.1 91 260-371 186-279 (287)
366 3q94_A Fructose-bisphosphate a 95.0 0.4 1.4E-05 46.9 14.1 145 202-364 79-238 (288)
367 4adt_A Pyridoxine biosynthetic 94.9 0.19 6.4E-06 49.5 11.7 86 286-374 29-118 (297)
368 2r91_A 2-keto-3-deoxy-(6-phosp 94.9 0.12 4.3E-06 50.4 10.4 119 214-349 17-145 (286)
369 1zco_A 2-dehydro-3-deoxyphosph 94.9 0.28 9.6E-06 47.3 12.7 116 250-371 114-236 (262)
370 4h1z_A Enolase Q92ZS5; dehydra 94.8 0.13 4.5E-06 52.9 10.9 123 212-360 186-311 (412)
371 3igs_A N-acetylmannosamine-6-p 94.8 0.11 3.6E-06 49.4 9.3 97 258-371 6-117 (232)
372 4h83_A Mandelate racemase/muco 94.8 0.19 6.4E-06 51.3 11.8 126 212-361 162-290 (388)
373 2hmc_A AGR_L_411P, dihydrodipi 94.8 0.25 8.4E-06 49.7 12.4 129 214-359 45-184 (344)
374 3sgz_A Hydroxyacid oxidase 2; 94.8 0.036 1.2E-06 55.9 6.2 83 202-307 216-302 (352)
375 2nuw_A 2-keto-3-deoxygluconate 94.8 0.12 4.2E-06 50.5 9.9 120 214-350 18-147 (288)
376 3l0g_A Nicotinate-nucleotide p 94.7 0.13 4.6E-06 50.4 9.9 91 260-371 195-288 (300)
377 3gnn_A Nicotinate-nucleotide p 94.7 0.095 3.2E-06 51.5 8.9 91 260-371 197-290 (298)
378 4af0_A Inosine-5'-monophosphat 94.6 0.065 2.2E-06 56.6 7.8 69 286-364 281-352 (556)
379 1gvf_A Tagatose-bisphosphate a 94.6 0.67 2.3E-05 45.3 14.6 144 203-364 74-234 (286)
380 3aty_A Tcoye, prostaglandin F2 94.6 0.13 4.4E-06 52.5 9.9 83 205-308 245-338 (379)
381 1m3u_A 3-methyl-2-oxobutanoate 94.6 0.23 8E-06 47.9 11.1 151 158-339 23-203 (264)
382 1zfj_A Inosine monophosphate d 94.6 0.1 3.6E-06 54.8 9.5 70 286-363 233-303 (491)
383 3ffs_A Inosine-5-monophosphate 94.5 0.12 4E-06 53.1 9.3 65 288-362 146-212 (400)
384 3tjx_A Dihydroorotate dehydrog 94.4 0.089 3E-06 53.0 8.1 119 184-308 172-308 (354)
385 3f4w_A Putative hexulose 6 pho 94.4 0.37 1.3E-05 44.3 11.8 124 212-364 9-136 (211)
386 3va8_A Probable dehydratase; e 94.3 0.22 7.5E-06 51.8 11.0 121 213-361 190-313 (445)
387 2v82_A 2-dehydro-3-deoxy-6-pho 94.2 0.15 5E-06 47.2 8.7 82 271-363 6-88 (212)
388 3vdg_A Probable glucarate dehy 94.2 0.27 9.1E-06 51.2 11.5 121 213-361 192-315 (445)
389 3ajx_A 3-hexulose-6-phosphate 94.2 0.4 1.4E-05 43.9 11.6 130 206-364 3-136 (207)
390 1w3i_A EDA, 2-keto-3-deoxy glu 94.2 0.3 1E-05 47.9 11.2 119 214-349 18-146 (293)
391 3q94_A Fructose-bisphosphate a 94.2 0.26 8.8E-06 48.2 10.6 102 256-367 63-184 (288)
392 3vav_A 3-methyl-2-oxobutanoate 94.2 0.55 1.9E-05 45.5 12.8 150 158-339 35-215 (275)
393 3iv3_A Tagatose 1,6-diphosphat 94.2 0.38 1.3E-05 48.0 11.9 109 257-368 147-286 (332)
394 1vs1_A 3-deoxy-7-phosphoheptul 94.1 0.5 1.7E-05 45.9 12.4 116 249-371 128-251 (276)
395 2ozt_A TLR1174 protein; struct 94.0 0.58 2E-05 46.5 13.1 124 213-361 115-244 (332)
396 2isw_A Putative fructose-1,6-b 93.9 0.61 2.1E-05 46.3 12.7 139 202-357 74-229 (323)
397 3eoo_A Methylisocitrate lyase; 93.9 0.21 7.3E-06 49.1 9.3 109 254-362 66-191 (298)
398 2zbt_A Pyridoxal biosynthesis 93.8 0.17 5.9E-06 49.5 8.8 95 270-373 20-117 (297)
399 4avf_A Inosine-5'-monophosphat 93.7 0.11 3.9E-06 54.7 7.7 70 285-362 228-298 (490)
400 3vc5_A Mandelate racemase/muco 93.7 0.38 1.3E-05 50.0 11.5 121 213-361 187-310 (441)
401 1rvg_A Fructose-1,6-bisphospha 93.7 1 3.6E-05 44.2 13.9 139 202-357 71-227 (305)
402 4fxs_A Inosine-5'-monophosphat 93.7 0.18 6E-06 53.3 9.0 70 285-362 230-300 (496)
403 3o1n_A 3-dehydroquinate dehydr 93.6 1.4 4.7E-05 42.8 14.5 139 203-363 38-197 (276)
404 1y0e_A Putative N-acetylmannos 93.6 0.59 2E-05 43.3 11.6 131 204-364 7-148 (223)
405 3iwp_A Copper homeostasis prot 93.5 1.4 4.6E-05 43.0 14.3 138 203-362 89-238 (287)
406 1vr6_A Phospho-2-dehydro-3-deo 93.5 0.36 1.2E-05 48.5 10.6 117 249-371 196-319 (350)
407 1gvf_A Tagatose-bisphosphate a 93.5 0.4 1.4E-05 46.8 10.6 102 256-367 59-180 (286)
408 4h2h_A Mandelate racemase/muco 93.5 0.52 1.8E-05 47.7 12.0 131 203-361 139-273 (376)
409 3vav_A 3-methyl-2-oxobutanoate 93.5 0.76 2.6E-05 44.5 12.4 127 221-361 41-192 (275)
410 3n9r_A Fructose-bisphosphate a 93.5 0.7 2.4E-05 45.5 12.3 102 256-367 58-180 (307)
411 3sz8_A 2-dehydro-3-deoxyphosph 93.5 0.53 1.8E-05 45.9 11.4 109 249-365 117-244 (285)
412 2nv1_A Pyridoxal biosynthesis 93.5 0.67 2.3E-05 45.5 12.4 89 269-366 19-110 (305)
413 4dbe_A Orotidine 5'-phosphate 93.4 0.67 2.3E-05 43.5 11.6 71 287-370 124-195 (222)
414 1wa3_A 2-keto-3-deoxy-6-phosph 93.3 0.2 6.7E-06 46.0 7.8 82 272-365 10-92 (205)
415 1jcn_A Inosine monophosphate d 93.3 0.13 4.3E-06 54.6 7.2 71 285-363 254-325 (514)
416 2isw_A Putative fructose-1,6-b 93.3 0.96 3.3E-05 44.8 13.0 103 256-368 59-179 (323)
417 1yxy_A Putative N-acetylmannos 93.3 0.6 2.1E-05 43.7 11.2 130 201-359 15-157 (234)
418 1xg4_A Probable methylisocitra 93.2 0.35 1.2E-05 47.5 9.7 108 253-361 60-186 (295)
419 1hg3_A Triosephosphate isomera 93.1 0.86 2.9E-05 42.9 11.9 104 259-371 106-214 (225)
420 3usb_A Inosine-5'-monophosphat 93.1 0.34 1.2E-05 51.3 10.2 71 286-364 256-327 (511)
421 3nvt_A 3-deoxy-D-arabino-heptu 93.1 0.35 1.2E-05 49.3 9.8 111 249-365 232-349 (385)
422 3m47_A Orotidine 5'-phosphate 93.0 1.8 6.3E-05 40.6 14.2 132 206-369 69-209 (228)
423 1o60_A 2-dehydro-3-deoxyphosph 93.0 0.61 2.1E-05 45.7 11.1 115 249-371 115-248 (292)
424 2qkf_A 3-deoxy-D-manno-octulos 92.9 0.44 1.5E-05 46.4 9.8 110 249-366 112-240 (280)
425 3qld_A Mandelate racemase/muco 92.9 0.79 2.7E-05 46.7 12.2 130 204-362 138-270 (388)
426 1vhc_A Putative KHG/KDPG aldol 92.9 0.44 1.5E-05 44.9 9.5 80 273-363 18-97 (224)
427 1w0m_A TIM, triosephosphate is 92.9 1.8 6.2E-05 40.7 13.8 104 259-371 103-211 (226)
428 1o5k_A DHDPS, dihydrodipicolin 92.8 0.17 5.9E-06 49.9 6.9 93 272-369 23-121 (306)
429 2ehh_A DHDPS, dihydrodipicolin 92.8 0.17 5.9E-06 49.6 6.8 93 272-369 11-109 (294)
430 2yxg_A DHDPS, dihydrodipicolin 92.8 0.18 6.2E-06 49.3 6.9 93 272-369 11-109 (289)
431 2opj_A O-succinylbenzoate-COA 92.7 0.13 4.4E-06 51.3 5.9 130 205-361 71-202 (327)
432 1m3u_A 3-methyl-2-oxobutanoate 92.7 0.86 3E-05 43.9 11.4 127 221-361 29-180 (264)
433 1rvg_A Fructose-1,6-bisphospha 92.6 1.2 4.1E-05 43.8 12.5 106 256-372 58-183 (305)
434 2ekc_A AQ_1548, tryptophan syn 92.5 1.4 4.8E-05 42.2 12.8 100 259-362 4-129 (262)
435 1dbt_A Orotidine 5'-phosphate 92.5 0.83 2.8E-05 43.2 11.0 135 204-370 57-222 (239)
436 3daq_A DHDPS, dihydrodipicolin 92.3 0.23 8E-06 48.6 7.0 86 283-369 21-111 (292)
437 1vqt_A Orotidine 5'-phosphate 92.3 0.82 2.8E-05 42.6 10.5 65 286-370 127-200 (213)
438 1xky_A Dihydrodipicolinate syn 92.2 0.26 8.9E-06 48.5 7.3 85 283-369 31-121 (301)
439 2pcq_A Putative dihydrodipicol 92.2 0.71 2.4E-05 44.9 10.4 120 214-351 17-143 (283)
440 1vrd_A Inosine-5'-monophosphat 92.2 0.33 1.1E-05 51.1 8.5 71 285-363 236-307 (494)
441 3cpr_A Dihydrodipicolinate syn 92.1 0.31 1.1E-05 48.0 7.8 85 283-369 35-125 (304)
442 3flu_A DHDPS, dihydrodipicolin 92.1 0.27 9.4E-06 48.2 7.3 86 283-369 26-116 (297)
443 1wue_A Mandelate racemase/muco 92.1 0.71 2.4E-05 46.9 10.6 120 213-361 160-281 (386)
444 3l21_A DHDPS, dihydrodipicolin 92.1 0.26 8.9E-06 48.6 7.1 86 283-369 34-124 (304)
445 3n9r_A Fructose-bisphosphate a 92.1 2 6.7E-05 42.3 13.2 139 202-357 73-229 (307)
446 3qze_A DHDPS, dihydrodipicolin 92.0 0.25 8.5E-06 49.0 6.9 86 283-369 42-132 (314)
447 2yyu_A Orotidine 5'-phosphate 92.0 0.63 2.2E-05 44.2 9.6 135 204-370 58-223 (246)
448 4dpp_A DHDPS 2, dihydrodipicol 92.0 1.7 5.8E-05 43.8 13.0 82 214-305 78-161 (360)
449 1wbh_A KHG/KDPG aldolase; lyas 92.0 0.53 1.8E-05 43.9 8.7 81 271-362 15-95 (214)
450 3jr2_A Hexulose-6-phosphate sy 91.8 1.2 4.2E-05 41.2 11.2 130 205-363 8-140 (218)
451 3fok_A Uncharacterized protein 91.8 0.8 2.7E-05 44.9 10.0 98 256-368 162-279 (307)
452 2ojp_A DHDPS, dihydrodipicolin 91.8 0.29 9.8E-06 47.9 7.0 86 283-369 20-110 (292)
453 3nav_A Tryptophan synthase alp 91.8 0.6 2.1E-05 45.2 9.1 104 258-363 6-133 (271)
454 3a5f_A Dihydrodipicolinate syn 91.8 0.3 1E-05 47.8 7.1 86 283-369 20-110 (291)
455 1zlp_A PSR132, petal death pro 91.8 0.75 2.6E-05 45.6 9.9 56 253-308 82-139 (318)
456 3tak_A DHDPS, dihydrodipicolin 91.7 0.29 9.9E-06 47.9 7.0 86 283-369 20-110 (291)
457 2wkj_A N-acetylneuraminate lya 91.7 0.3 1E-05 48.1 7.0 85 283-369 30-120 (303)
458 3b4u_A Dihydrodipicolinate syn 91.6 0.31 1.1E-05 47.8 7.0 84 283-368 22-111 (294)
459 3cyj_A Mandelate racemase/muco 91.6 2.3 7.7E-05 42.8 13.7 120 214-361 144-269 (372)
460 3fs2_A 2-dehydro-3-deoxyphosph 91.5 1 3.4E-05 44.2 10.4 108 249-365 138-263 (298)
461 1f6k_A N-acetylneuraminate lya 91.5 0.31 1.1E-05 47.7 7.0 87 283-370 22-114 (293)
462 3m47_A Orotidine 5'-phosphate 91.5 1.6 5.3E-05 41.1 11.5 87 204-307 13-100 (228)
463 1oy0_A Ketopantoate hydroxymet 91.4 1.4 4.7E-05 42.9 11.2 102 220-336 45-153 (281)
464 1o66_A 3-methyl-2-oxobutanoate 91.4 1.1 3.8E-05 43.4 10.5 102 221-336 29-135 (275)
465 3na8_A Putative dihydrodipicol 91.4 0.26 8.8E-06 48.9 6.2 86 283-369 43-133 (315)
466 3fa4_A 2,3-dimethylmalate lyas 91.4 0.65 2.2E-05 45.7 9.0 107 255-361 63-189 (302)
467 2bdq_A Copper homeostasis prot 91.4 3.4 0.00012 38.7 13.5 140 203-362 54-207 (224)
468 4h3d_A 3-dehydroquinate dehydr 91.3 4.3 0.00015 38.8 14.7 138 203-362 18-176 (258)
469 3si9_A DHDPS, dihydrodipicolin 91.3 0.26 9.1E-06 48.8 6.2 86 283-369 41-131 (315)
470 3ru6_A Orotidine 5'-phosphate 91.2 4.5 0.00015 39.7 14.8 67 288-370 161-238 (303)
471 2yci_X 5-methyltetrahydrofolat 91.2 1.2 4.1E-05 43.1 10.6 95 214-337 32-130 (271)
472 3vnd_A TSA, tryptophan synthas 91.1 0.79 2.7E-05 44.3 9.2 104 258-363 4-131 (267)
473 2r8w_A AGR_C_1641P; APC7498, d 91.1 0.3 1E-05 48.7 6.5 86 283-369 53-143 (332)
474 1zco_A 2-dehydro-3-deoxyphosph 91.1 0.98 3.4E-05 43.5 9.8 107 183-304 113-226 (262)
475 2v9d_A YAGE; dihydrodipicolini 91.1 0.32 1.1E-05 48.8 6.6 86 283-369 50-140 (343)
476 2rfg_A Dihydrodipicolinate syn 91.1 0.28 9.7E-06 48.1 6.1 85 283-369 19-109 (297)
477 2hjp_A Phosphonopyruvate hydro 91.0 1.4 4.8E-05 43.0 11.0 56 253-308 57-113 (290)
478 3o07_A Pyridoxine biosynthesis 91.0 0.75 2.6E-05 44.5 8.7 73 286-359 19-94 (291)
479 1eix_A Orotidine 5'-monophosph 91.0 1.7 5.7E-05 41.2 11.3 136 203-370 67-229 (245)
480 3b8i_A PA4872 oxaloacetate dec 90.9 0.95 3.3E-05 44.2 9.6 56 253-308 64-120 (287)
481 3s5o_A 4-hydroxy-2-oxoglutarat 90.9 0.74 2.5E-05 45.3 8.9 85 283-368 33-122 (307)
482 2wqp_A Polysialic acid capsule 90.8 1.1 3.8E-05 44.9 10.2 112 249-371 131-243 (349)
483 2ze3_A DFA0005; organic waste 90.7 0.79 2.7E-05 44.5 8.8 107 253-362 58-188 (275)
484 3fkr_A L-2-keto-3-deoxyarabona 90.6 0.41 1.4E-05 47.2 6.8 82 283-366 27-114 (309)
485 3h5d_A DHDPS, dihydrodipicolin 90.6 0.6 2E-05 46.1 8.0 86 283-369 26-117 (311)
486 3ijl_A Muconate cycloisomerase 90.5 1.3 4.3E-05 44.2 10.5 121 210-360 130-251 (338)
487 3m5v_A DHDPS, dihydrodipicolin 90.5 0.39 1.3E-05 47.2 6.6 86 283-369 26-117 (301)
488 1tqj_A Ribulose-phosphate 3-ep 90.5 0.58 2E-05 44.1 7.5 133 206-363 7-142 (230)
489 1i4n_A Indole-3-glycerol phosp 90.4 1.2 4E-05 42.7 9.6 84 265-363 95-179 (251)
490 2vc6_A MOSA, dihydrodipicolina 90.4 0.3 1E-05 47.8 5.7 85 283-369 19-109 (292)
491 3lye_A Oxaloacetate acetyl hyd 90.4 0.75 2.6E-05 45.4 8.4 109 254-362 69-198 (307)
492 1twd_A Copper homeostasis prot 90.4 3.6 0.00012 39.3 12.8 123 219-360 11-146 (256)
493 4dpp_A DHDPS 2, dihydrodipicol 90.3 0.5 1.7E-05 47.7 7.2 86 283-369 78-168 (360)
494 2c6q_A GMP reductase 2; TIM ba 90.2 0.45 1.5E-05 47.9 6.8 67 289-363 121-190 (351)
495 1mxs_A KDPG aldolase; 2-keto-3 90.2 0.83 2.8E-05 43.0 8.2 90 259-362 16-105 (225)
496 3ve9_A Orotidine-5'-phosphate 90.1 0.39 1.3E-05 44.9 5.8 72 286-370 116-188 (215)
497 3lg3_A Isocitrate lyase; conse 89.8 4.9 0.00017 41.3 14.0 151 204-366 153-356 (435)
498 3eb2_A Putative dihydrodipicol 89.7 12 0.00042 36.3 16.6 142 199-372 69-217 (300)
499 4a29_A Engineered retro-aldol 89.7 8.5 0.00029 36.7 14.8 90 271-368 45-139 (258)
500 3tml_A 2-dehydro-3-deoxyphosph 89.7 1.4 4.8E-05 43.0 9.6 108 249-365 114-245 (288)
No 1
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=1e-43 Score=359.83 Aligned_cols=288 Identities=26% Similarity=0.411 Sum_probs=251.5
Q ss_pred CCccccccccCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhCC
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEP 227 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~ 227 (487)
++++++|||++++|.+|+.++.++|+++++|||++.+.+........+.+ ....+.|+++||.|++++.+.++|+++++
T Consensus 4 ~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~~a~~ 82 (318)
T 1vhn_A 4 EVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARILSE 82 (318)
T ss_dssp -CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHHHHTT
T ss_pred CCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999887766544444445 66678999999999999999999999987
Q ss_pred cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 228 HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 228 ~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
++|+||||+|||..+.+++.+|+.++++++++.++++++++.+++||++|+|.|++..+..++++.++++|+|+|+||||
T Consensus 83 ~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v~g~ 162 (318)
T 1vhn_A 83 KYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTR 162 (318)
T ss_dssp TCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESS
T ss_pred hCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEEcCC
Confidence 79999999999998888888999999999999999999999999999999999988877779999999999999999999
Q ss_pred ccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccccCCC------C---C
Q psy7343 308 TVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQT------R---P 378 (487)
Q Consensus 308 t~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~~~------~---~ 378 (487)
+..+. +++.++|+.++++++ ++|||+||||+|++|+.++++.+|||+||+||+++.|||+|.+.. . +
T Consensus 163 ~~~~~--~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~~g~~~~~ 238 (318)
T 1vhn_A 163 TVVQS--FTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEP 238 (318)
T ss_dssp CTTTT--TSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHHHSCCCCC
T ss_pred Ccccc--CCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHhCCCCCCC
Confidence 88664 778889999999888 999999999999999999997689999999999999999987541 1 2
Q ss_pred c----HHHHHHHHHHHHH-cCh--hHHHHHHHHHHHhHhhcCCCCcHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy7343 379 A----WELASEYLDLVAQ-YPV--RLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRER 443 (487)
Q Consensus 379 ~----~~~~~~~l~~~~~-~~~--~~~~~r~~l~~~~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~~~~ 443 (487)
. .+.+++|++...+ ++. .+..+|+|+.+|++ ++++++++|++|.++++.+++.++++++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 307 (318)
T 1vhn_A 239 SREEILRTFERHLELLIKTKGERKAVVEMRKFLAGYTK---DLKGARRFREKVMKIEEVQILKEMFYNFIKE 307 (318)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHTT---TCTTHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHh---cCCChHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 2 3466677776654 454 57789999887654 5789999999999999999999999998753
No 2
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=4.1e-43 Score=359.49 Aligned_cols=288 Identities=25% Similarity=0.442 Sum_probs=245.5
Q ss_pred CCccccccccCCCchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhC
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAE 226 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~ 226 (487)
++++++|||+++||.+||.+++++|+ ++++|||++.+.++++.. .++++..+.+.|+++||+|++++.+.++|++++
T Consensus 3 ~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~--~~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a~ 80 (350)
T 3b0p_A 3 DPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNR--ERLLAFRPEEHPIALQLAGSDPKSLAEAARIGE 80 (350)
T ss_dssp CCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCH--HHHHCCCGGGCSEEEEEECSCHHHHHHHHHHHH
T ss_pred CCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCH--HHHhccCCCCCeEEEEeCCCCHHHHHHHHHHHH
Confidence 45899999999999999999999986 999999999888876554 345555667889999999999999999999998
Q ss_pred Cc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccc----cHHHHHHHHHHcCCcE
Q psy7343 227 PH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVN----KTVEYARMLERAGCQL 301 (487)
Q Consensus 227 ~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~----~~~e~a~~le~~G~d~ 301 (487)
++ +|+||||+|||..+.+++.+|+.++++++++.++++++++.+++||++|+|++++.. +..++++.++++|+|+
T Consensus 81 ~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~ 160 (350)
T 3b0p_A 81 AFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKV 160 (350)
T ss_dssp HTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCE
T ss_pred HcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCE
Confidence 77 999999999999988899999999999999999999999999999999999987653 5788999999999999
Q ss_pred EEEEccccCCCCCCCC-------CCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccccc
Q psy7343 302 LAVHGRTVDQRGMNTG-------LASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 302 I~VhgRt~~~~g~~~g-------~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~ 373 (487)
|+||+|+..+. ++| +.+|+.++++++.+ ++|||+||||.|++|+.+++ + |||+||+||+++.|||+|.
T Consensus 161 I~V~~r~~~~g--~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l-~-GaD~V~iGRa~l~~P~l~~ 236 (350)
T 3b0p_A 161 FVVHARSALLA--LSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHL-K-RVDGVMLGRAVYEDPFVLE 236 (350)
T ss_dssp EEEECSCBC------------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-T-TSSEEEECHHHHHCGGGGT
T ss_pred EEEecCchhcc--cCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHH-h-CCCEEEECHHHHhCcHHHH
Confidence 99999987542 443 35899999999999 99999999999999999999 4 8999999999999999998
Q ss_pred CCC--------CCc-HHHHHHHHHH---HHHcChhHHHHHHHHHHHhHhhcCCCCcHHHHHHHHhcCCHHHHHHHHHHHH
Q psy7343 374 GQT--------RPA-WELASEYLDL---VAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLR 441 (487)
Q Consensus 374 ~~~--------~~~-~~~~~~~l~~---~~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~~ 441 (487)
++. .+. .+.++.++++ ...++..+..+|+|+.+|++ ++++++++|+.|.++++.+++.++++++.
T Consensus 237 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~kh~~~~~~---g~~~~~~~r~~l~~~~~~~~~~~~l~~~~ 313 (350)
T 3b0p_A 237 EADRRVFGLPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFR---GRPKGRLWRRLLSEGRSLQALDRALRLME 313 (350)
T ss_dssp THHHHTTCCSCCCCHHHHHHHHHHHHHHHHHHTCCHHHHHTTSTTTTT---TSTTHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHc---cCCCHHHHHHHHHCCCCHHHHHHHHHHHh
Confidence 652 122 3444444444 33456678899999977654 67899999999999999999999999987
Q ss_pred HHh
Q psy7343 442 ERF 444 (487)
Q Consensus 442 ~~~ 444 (487)
+..
T Consensus 314 ~~~ 316 (350)
T 3b0p_A 314 EEV 316 (350)
T ss_dssp HHH
T ss_pred hhc
Confidence 544
No 3
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.94 E-value=7.4e-27 Score=238.05 Aligned_cols=263 Identities=16% Similarity=0.184 Sum_probs=186.0
Q ss_pred hhcCCCceEEecCCCCCC-----HH-------HHHHHHHcCCCeEEccceecc--cccc-------CcH--HHHHHhh--
Q psy7343 74 TQLGSPRFILAPMVDASE-----LP-------WRLLSRRYGSHLCYTPMVSAH--QFIA-------DKK--LRQEILM-- 128 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~td-----~p-------FR~l~~~~Gadl~~TEMi~a~--~l~~-------~~~--~~~~~~~-- 128 (487)
.++ +|++++|||++++. .| |+..+ +.|+++++|||+... +... +.. ..++.+.
T Consensus 14 ~~l-~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA-~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~ 91 (338)
T 1z41_A 14 MTL-KNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRA-IGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQ 91 (338)
T ss_dssp EEE-SSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHH-HTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHH
T ss_pred EEE-cCccEECCcCCCcCCCCCCCCCHHHHHHHHHHH-cCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHH
Confidence 445 78999999999874 35 44444 359999999998664 3221 122 1233332
Q ss_pred hCCCCCceeeeeccccCCCCCc-cccccccCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCee
Q psy7343 129 STPEDRPLIIQRTIFPRLGSPR-FILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLI 207 (487)
Q Consensus 129 ~~~~e~p~~vQl~~~~~~g~~~-~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~ 207 (487)
.+..+.++++|+...+...... ..++| +..++. .+ ..+| .+| ..+...+
T Consensus 92 vh~~g~~i~~QL~h~Gr~~~~~~~~~~p----S~~~~~-----~~---~~~p----~~m--t~~eI~~------------ 141 (338)
T 1z41_A 92 VKEQGSKIGIQLAHAGRKAELEGDIFAP----SAIAFD-----EQ---SATP----VEM--SAEKVKE------------ 141 (338)
T ss_dssp HHHTTCEEEEEEECCGGGCCCSSCCEES----SSCCSS-----TT---SCCC----EEC--CHHHHHH------------
T ss_pred HHhcCCEEEEEecCCCcccCCCCCCcCC----CCCCCC-----CC---CCCC----ccC--CHHHHHH------------
Confidence 3456779999985443211110 01111 111000 00 0000 000 0000111
Q ss_pred eeeccCCHHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEE
Q psy7343 208 IQFCGNDSKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCK 277 (487)
Q Consensus 208 Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vK 277 (487)
-.++|.++|+++.++ ||+||||++| |..+.+.+.||+.++++++++.+++++|++++++||.+|
T Consensus 142 ------~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vr 215 (338)
T 1z41_A 142 ------TVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVR 215 (338)
T ss_dssp ------HHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred ------HHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEE
Confidence 236788999888776 9999999997 888889999999999999999999999999999999999
Q ss_pred eec------ccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCC-CCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHH
Q psy7343 278 IRI------YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL-ASWEHITAVRKALTIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 278 iR~------~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~-~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~ 350 (487)
++. +++.++..++++.+++.|+|+|.||+++........++ .+++.++++++.+++||+++|||.|+++++++
T Consensus 216 is~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~ 295 (338)
T 1z41_A 216 VSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEI 295 (338)
T ss_dssp EECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHH
T ss_pred ecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
Confidence 988 34566788999999999999999999865321111222 36799999999999999999999999999999
Q ss_pred HHhcCCcEEEeccccccCcccccC
Q psy7343 351 LAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 351 l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
++..+||+|++||+++.||+++.+
T Consensus 296 l~~G~aD~V~iGR~~i~nPdl~~k 319 (338)
T 1z41_A 296 LQNGRADLIFIGRELLRDPFFART 319 (338)
T ss_dssp HHTTSCSEEEECHHHHHCTTHHHH
T ss_pred HHcCCceEEeecHHHHhCchHHHH
Confidence 965569999999999999999864
No 4
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.94 E-value=2.8e-26 Score=236.60 Aligned_cols=274 Identities=15% Similarity=0.126 Sum_probs=189.0
Q ss_pred hhcCCCceEEecCCCC-------CCHHHHHHHHHcCCCeEEccceecc--cccc-------CcH--HHHHHhh--hCCCC
Q psy7343 74 TQLGSPRFILAPMVDA-------SELPWRLLSRRYGSHLCYTPMVSAH--QFIA-------DKK--LRQEILM--STPED 133 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~-------td~pFR~l~~~~Gadl~~TEMi~a~--~l~~-------~~~--~~~~~~~--~~~~e 133 (487)
.++ +|++++|||+++ |+..+|..+++.|+++++||++.+. +... +.+ ..++.+. .+..+
T Consensus 20 ~~l-~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh~~G 98 (377)
T 2r14_A 20 LSL-PNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVVEAVHAKG 98 (377)
T ss_dssp EEE-SCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHHHHHHHTT
T ss_pred EEe-cCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHHHHHhhcC
Confidence 455 789999999988 9999999999999999999998775 3321 222 1344443 45567
Q ss_pred CceeeeeccccCCCCCccccccccCCCchHHHHHHHHhCCccceeccccchhhhcCh-hH-HH---HHHhcCCCCCC--e
Q psy7343 134 RPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADK-KL-RQ---EILMSTPEDRP--L 206 (487)
Q Consensus 134 ~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~-~~-~~---~~l~~~~~~~P--v 206 (487)
.++++||...+...... +. + .|. +.+..+++.... .. .. ..........| +
T Consensus 99 ~~i~~QL~H~Gr~~~~~-~~-~---------------~~~-----~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~m 156 (377)
T 2r14_A 99 GRIALQLWHVGRVSHEL-VQ-P---------------DGQ-----QPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRAL 156 (377)
T ss_dssp CCEEEEEECCTTSCCTT-TS-G---------------GGC-----CCEESSSCCCTTCEEEEECTTSCEEEEECCCCEEC
T ss_pred CeEEEEccCCccccccc-cc-c---------------CCC-----cccCCCcccccccccccccccccccccCCCCCccC
Confidence 89999985543211111 00 0 000 001111100000 00 00 00000000011 1
Q ss_pred eeeeccCCHHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhccC-cEE
Q psy7343 207 IIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQV-PVS 275 (487)
Q Consensus 207 ~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~i-PV~ 275 (487)
+..=-....++|+++|++++++ +|+||||++| |..+.+.+.||+.++++++++.+++++|+++++. ||.
T Consensus 157 t~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~ 236 (377)
T 2r14_A 157 ETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVG 236 (377)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEE
Confidence 1100001246888999888776 9999999998 8889999999999999999999999999999853 999
Q ss_pred EEeeccc---------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHH
Q psy7343 276 CKIRIYQ---------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLAD 346 (487)
Q Consensus 276 vKiR~~~---------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~d 346 (487)
+|++... +.++..++++.++++|+|+|.+|+|+..+. ..+ ..++.++++++.+++|||++||| ++++
T Consensus 237 vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~--~~~-~~~~~~~~ik~~~~iPvi~~Ggi-~~~~ 312 (377)
T 2r14_A 237 IRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGG--DIT-YPEGFREQMRQRFKGGLIYCGNY-DAGR 312 (377)
T ss_dssp EEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--------C-CCTTHHHHHHHHCCSEEEEESSC-CHHH
T ss_pred EEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCC--CCc-chHHHHHHHHHHCCCCEEEECCC-CHHH
Confidence 9998742 234578889999999999999999875432 222 26788999999999999999999 6999
Q ss_pred HHHHHHhcCCcEEEeccccccCcccccC
Q psy7343 347 VEACLAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 347 a~~~l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
+++++++.+||+|++||+++.||+++.+
T Consensus 313 a~~~l~~g~aD~V~igR~~l~~P~l~~k 340 (377)
T 2r14_A 313 AQARLDDNTADAVAFGRPFIANPDLPER 340 (377)
T ss_dssp HHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHHHHHCCCceEEeecHHHHhCchHHHH
Confidence 9999977779999999999999999864
No 5
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.93 E-value=2.4e-25 Score=228.78 Aligned_cols=276 Identities=13% Similarity=0.140 Sum_probs=189.0
Q ss_pred hhcCCCceEEecCCCC---------CCHHHHHHHHHcCCCeEEccceecc--cccc-------CcH--HHHHHhh--hCC
Q psy7343 74 TQLGSPRFILAPMVDA---------SELPWRLLSRRYGSHLCYTPMVSAH--QFIA-------DKK--LRQEILM--STP 131 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~---------td~pFR~l~~~~Gadl~~TEMi~a~--~l~~-------~~~--~~~~~~~--~~~ 131 (487)
.++ +|++++|||+++ |+..+|..+++.|+++++|||+... +... +.+ ..++.+. .+.
T Consensus 14 ~~l-~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~vh~ 92 (364)
T 1vyr_A 14 VTA-PNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKITAGVHA 92 (364)
T ss_dssp EEE-SSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHHHHHHH
T ss_pred EEE-CCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHHHHHHh
Confidence 455 789999999987 6889999999999999999998765 3321 222 1344443 355
Q ss_pred CCCceeeeeccccCCCCCccccccccCCCchHHHHHHHHhCCccceeccccc-hhhhcChhHHHHHHhcCCCCCC--eee
Q psy7343 132 EDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSA-HQFIADKKLRQEILMSTPEDRP--LII 208 (487)
Q Consensus 132 ~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~-~~Ll~~~~~~~~~l~~~~~~~P--v~V 208 (487)
.+.++++||...+..... .+. + +....+.+++.-.. ..+..++.-. ........| ++.
T Consensus 93 ~g~~i~~QL~H~Gr~~~~-~~~-~--------------~g~~~~apS~i~~~~~~~~~~~~g~---~~~~~~~~p~~mt~ 153 (364)
T 1vyr_A 93 EDGRIAVQLWHTGRISHS-SIQ-P--------------GGQAPVSASALNANTRTSLRDENGN---AIRVDTTTPRALEL 153 (364)
T ss_dssp TTCCEEEEEECCTTSSCG-GGS-G--------------GGCCCEESSSCCCCSEEEEECTTSC---EEEEECCCCEECCG
T ss_pred cCCeEEEEeccCCcccCc-ccc-c--------------CCCccccCCCccccccccccccccc---ccccCCCCCCcCCH
Confidence 678999998544321111 100 0 00000011100000 0000000000 000000011 111
Q ss_pred eeccCCHHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhcc-CcEEEE
Q psy7343 209 QFCGNDSKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VPVSCK 277 (487)
Q Consensus 209 qi~g~d~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iPV~vK 277 (487)
.=-....++|.++|++++++ +|+||||++| |..+.+.+.||+.++++++++.+++++|+++++ .||.+|
T Consensus 154 ~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vr 233 (364)
T 1vyr_A 154 DEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIR 233 (364)
T ss_dssp GGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEE
Confidence 10011346888999888776 9999999997 878889999999999999999999999999984 399999
Q ss_pred eeccc----------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHH
Q psy7343 278 IRIYQ----------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADV 347 (487)
Q Consensus 278 iR~~~----------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da 347 (487)
++.+. +.++..++++.++++|+|+|.+|+|+..+. . ...++.++++++.+++||+++||| |++++
T Consensus 234 ls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--~--~~~~~~~~~v~~~~~iPvi~~Ggi-t~~~a 308 (364)
T 1vyr_A 234 VSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG--K--PYSEAFRQKVRERFHGVIIGAGAY-TAEKA 308 (364)
T ss_dssp ECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--C--CCCHHHHHHHHHHCCSEEEEESSC-CHHHH
T ss_pred EccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC--C--cccHHHHHHHHHHCCCCEEEECCc-CHHHH
Confidence 98862 122467789999999999999998865432 1 125788999999999999999999 89999
Q ss_pred HHHHHhcCCcEEEeccccccCcccccC
Q psy7343 348 EACLAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 348 ~~~l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
+++++..+||+|++||+++.||+++.+
T Consensus 309 ~~~l~~g~aD~V~~gR~~l~~P~~~~~ 335 (364)
T 1vyr_A 309 EDLIGKGLIDAVAFGRDYIANPDLVAR 335 (364)
T ss_dssp HHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHHHHCCCccEEEECHHHHhChhHHHH
Confidence 999976679999999999999999874
No 6
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.93 E-value=4e-25 Score=222.59 Aligned_cols=219 Identities=16% Similarity=0.182 Sum_probs=173.7
Q ss_pred CCccccccccCC-C-chHHHHHHHHhCCccceeccccchhhhcCh----------------------hHHHHHHhcC--C
Q psy7343 148 SPRFILAPMVDA-S-ELPWRLLSRRYGSHLCYTPMVSAHQFIADK----------------------KLRQEILMST--P 201 (487)
Q Consensus 148 ~~~~~lApma~~-t-d~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~----------------------~~~~~~l~~~--~ 201 (487)
++|+++|+ +. + +..++..+...|++++.+++++......++ +...+.+... .
T Consensus 12 ~npv~~Aa--g~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~ 89 (311)
T 1jub_A 12 ANPFMNAS--GVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKE 89 (311)
T ss_dssp SSSEEECT--TSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHH
T ss_pred CCCcEECC--CCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHh
Confidence 56888885 44 3 677888888899999988888754322111 1111222211 2
Q ss_pred C--CCCeeeeeccCCHHHHHHHHHhhCCc-Cc-EEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEE
Q psy7343 202 E--DRPLIIQFCGNDSKNLTEAAKLAEPH-CD-GIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCK 277 (487)
Q Consensus 202 ~--~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d-~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vK 277 (487)
. +.|+++|+.+.+++++.+++++++++ +| +||||++||.. ++ +..+..+++.+.++++++++.+++||++|
T Consensus 90 ~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~---~g--~~~~g~~~e~~~~iv~~vr~~~~~Pv~vK 164 (311)
T 1jub_A 90 NAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV---PG--EPQLAYDFEATEKLLKEVFTFFTKPLGVK 164 (311)
T ss_dssp TCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS---SS--CCCGGGCHHHHHHHHHHHTTTCCSCEEEE
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC---CC--cccccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 2 68999999999999999999999877 79 99999999985 22 34555689999999999999999999999
Q ss_pred eecccccccHHHHHHHHHHcCCcEEEEEcccc-----C------------CCCCCCCCC----CHHHHHHHHhhC--CCc
Q psy7343 278 IRIYQDVNKTVEYARMLERAGCQLLAVHGRTV-----D------------QRGMNTGLA----SWEHITAVRKAL--TIP 334 (487)
Q Consensus 278 iR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~-----~------------~~g~~~g~~----~~~~i~~i~~~~--~iP 334 (487)
++.+.+.++..++++.++++|+|+|.+|+++. . ..++++|.+ .++.++++++.+ ++|
T Consensus 165 i~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ip 244 (311)
T 1jub_A 165 LPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQ 244 (311)
T ss_dssp ECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSE
T ss_pred ECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCC
Confidence 98877666788889999999999999998861 1 112344544 378899999999 899
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCcEEEecccccc-CcccccC
Q psy7343 335 VIANGNIQCLADVEACLAQTGVAGVMTAEGNLY-NPALFTG 374 (487)
Q Consensus 335 Vi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~-~P~lf~~ 374 (487)
||++|||+|++|+.+++ ..|||+||+||+++. +|++|.+
T Consensus 245 vi~~GGI~~~~da~~~l-~~GAd~V~vg~~~l~~~p~~~~~ 284 (311)
T 1jub_A 245 IIGTGGIETGQDAFEHL-LCGATMLQIGTALHKEGPAIFDR 284 (311)
T ss_dssp EEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHHCTHHHHH
T ss_pred EEEECCCCCHHHHHHHH-HcCCCEEEEchHHHhcCcHHHHH
Confidence 99999999999999999 689999999999996 9999873
No 7
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.93 E-value=5.7e-25 Score=226.06 Aligned_cols=276 Identities=14% Similarity=0.144 Sum_probs=187.6
Q ss_pred hhcCCCceEEecCCCCC---------CHHHHHHHHHcCCCeEEccceecc--cccc-------CcHH--HHHHhh--hCC
Q psy7343 74 TQLGSPRFILAPMVDAS---------ELPWRLLSRRYGSHLCYTPMVSAH--QFIA-------DKKL--RQEILM--STP 131 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~t---------d~pFR~l~~~~Gadl~~TEMi~a~--~l~~-------~~~~--~~~~~~--~~~ 131 (487)
.++ +|++++|||++++ +..+|..+++.|+++++|||+... +... +.+. .++.+. .+.
T Consensus 14 ~~l-~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~~~vh~ 92 (365)
T 2gou_A 14 LTL-KNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVTEAVHA 92 (365)
T ss_dssp EEE-SSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHHHHHH
T ss_pred EEE-cCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHHHHHHh
Confidence 455 7899999999985 789999999999999999998755 3322 2221 344443 355
Q ss_pred CCCceeeeeccccCCCCCccccccccCCCchHHHHHHHHhCC-ccceecccc--chhhhcChhHHHHHHhcCCCCCCeee
Q psy7343 132 EDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVS--AHQFIADKKLRQEILMSTPEDRPLII 208 (487)
Q Consensus 132 ~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~Ga-~l~~t~~v~--~~~Ll~~~~~~~~~l~~~~~~~Pv~V 208 (487)
.+.++++||...+..... .+. .|. .+.+++.-. +.....+..-... .......+.++.
T Consensus 93 ~g~~i~~QL~H~Gr~~~~-~~~-----------------~g~~~~apS~i~~~~~~~~~~~~~g~~~-~~~~~~p~~mt~ 153 (365)
T 2gou_A 93 KGCAIFAQLWHVGRVTHP-DNI-----------------DGQQPISSSTLKAENVKVFVDNGSDEPG-FVDVAVPRAMTK 153 (365)
T ss_dssp HSCEEEEEEECCTTSSCG-GGT-----------------TTCCCEESSSCCCTTCEEEECCSSSSCE-EEECCCCEECCH
T ss_pred cCCeEEEEeecCCCcccc-ccc-----------------CCCCccCCCCcccccccccccccccccc-ccCCCCCCcCCH
Confidence 677999998554321111 100 010 011110000 0000000000000 000000000110
Q ss_pred eeccCCHHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhccC-cEEEE
Q psy7343 209 QFCGNDSKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQV-PVSCK 277 (487)
Q Consensus 209 qi~g~d~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~i-PV~vK 277 (487)
.=-..-.++|+++|+++.++ +|+||||+|| |..+.+.+.||+.++++++++.+++++|+++++. ||.+|
T Consensus 154 ~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vr 233 (365)
T 2gou_A 154 ADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVR 233 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEE
Confidence 00001236888999888776 9999999998 8788899999999999999999999999999843 99999
Q ss_pred eeccc---------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHH
Q psy7343 278 IRIYQ---------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVE 348 (487)
Q Consensus 278 iR~~~---------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~ 348 (487)
++... +.++..++++.+++.|+|+|.+|+++..... + ..++.++++++.+++|||++||| |+++++
T Consensus 234 is~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~---~-~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~ 308 (365)
T 2gou_A 234 LAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAP---D-TPVSFKRALREAYQGVLIYAGRY-NAEKAE 308 (365)
T ss_dssp ECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC---C-CCHHHHHHHHHHCCSEEEEESSC-CHHHHH
T ss_pred EccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCC---C-ccHHHHHHHHHHCCCcEEEeCCC-CHHHHH
Confidence 98732 2245778899999999999999988643211 1 24788999999999999999999 999999
Q ss_pred HHHHhcCCcEEEeccccccCcccccC
Q psy7343 349 ACLAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 349 ~~l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
++++..+||+|++||+++.||+++.+
T Consensus 309 ~~l~~g~aD~V~igR~~i~~P~l~~~ 334 (365)
T 2gou_A 309 QAINDGLADMIGFGRPFIANPDLPER 334 (365)
T ss_dssp HHHHTTSCSEEECCHHHHHCTTHHHH
T ss_pred HHHHCCCcceehhcHHHHhCchHHHH
Confidence 99976669999999999999999874
No 8
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.93 E-value=1.4e-25 Score=231.31 Aligned_cols=273 Identities=16% Similarity=0.133 Sum_probs=183.4
Q ss_pred hhcCCCceEEecCCCCC---CHH-------HHHHHHHcCCCeEEccceeccc--ccc-------CcH--HHHHHh--hhC
Q psy7343 74 TQLGSPRFILAPMVDAS---ELP-------WRLLSRRYGSHLCYTPMVSAHQ--FIA-------DKK--LRQEIL--MST 130 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~t---d~p-------FR~l~~~~Gadl~~TEMi~a~~--l~~-------~~~--~~~~~~--~~~ 130 (487)
.++ +|++++|||++++ +.| ||+.++ |+++++||++.+.. ... +.+ ..++.+ ..+
T Consensus 25 ~~l-~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh 101 (376)
T 1icp_A 25 FEL-CHRVVLAPLTRQRSYGYIPQPHAILHYSQRST--NGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVH 101 (376)
T ss_dssp EEE-SCSEEECCCCCCCCGGGSCCHHHHHHHHHTCC--TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHHHHHH
T ss_pred EEE-CCccEECCcCcCcCCCCCCCHHHHHHHHHhcC--CeeEEEECceeeccccccCcccCccCCHHHHHHHHHHHHHHH
Confidence 455 7899999999996 455 777776 79999999988753 221 222 134444 245
Q ss_pred CCCCceeeeeccccCCCCCccccccccCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCe--ee
Q psy7343 131 PEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPL--II 208 (487)
Q Consensus 131 ~~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv--~V 208 (487)
..+.++++||...+...... +. + .|. +.+..+++-........-........|- +.
T Consensus 102 ~~G~~i~~QL~H~Gr~~~~~-~~-~---------------~~~-----~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~ 159 (376)
T 1icp_A 102 AKGGIFFCQIWHVGRVSNKD-FQ-P---------------NGE-----DPISCTDRGLTPQIMSNGIDIAHFTRPRRLTT 159 (376)
T ss_dssp HTTCEEEEEEECCTTSSCTT-TS-G---------------GGC-----CCEESSSCCCCCEECTTSSCEECCCCCEECCT
T ss_pred hcCCeEEEEeecCCCCcCcc-cc-c---------------CCC-----ceecCCCCCCccccccccccccCCCCCCcCCH
Confidence 56789999986543211110 00 0 010 0011111100000000000000000111 11
Q ss_pred eeccCCHHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhccC-cEEEE
Q psy7343 209 QFCGNDSKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQV-PVSCK 277 (487)
Q Consensus 209 qi~g~d~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~i-PV~vK 277 (487)
.=-....++|+++|++++++ ||+||||+|| |..+.+.+.||+.+.++.+++.+++++|+++++- ||.+|
T Consensus 160 ~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vr 239 (376)
T 1icp_A 160 DEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIR 239 (376)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEE
Confidence 00011246888999888776 9999999998 8888899999999999999999999999999853 99999
Q ss_pred eeccc---------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHH
Q psy7343 278 IRIYQ---------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVE 348 (487)
Q Consensus 278 iR~~~---------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~ 348 (487)
++... +.++..++++.++++|+|+|.+|+|+..+. ..+..+++.++++++.+++||+++|+| +.++++
T Consensus 240 ls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~--~~~~~~~~~~~~vr~~~~iPvi~~G~i-~~~~a~ 316 (376)
T 1icp_A 240 ISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTA--WEKIECTESLVPMRKAYKGTFIVAGGY-DREDGN 316 (376)
T ss_dssp ECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC--------CCCCSHHHHHHCCSCEEEESSC-CHHHHH
T ss_pred eccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCC--CCccccHHHHHHHHHHcCCCEEEeCCC-CHHHHH
Confidence 98642 122468899999999999999999875432 122235677889999999999999999 899999
Q ss_pred HHHHhcCCcEEEeccccccCcccccC
Q psy7343 349 ACLAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 349 ~~l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
+++++.+||+|++||+++.|||++.+
T Consensus 317 ~~l~~g~aD~V~~gR~~l~~P~l~~k 342 (376)
T 1icp_A 317 RALIEDRADLVAYGRLFISNPDLPKR 342 (376)
T ss_dssp HHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHHHCCCCcEEeecHHHHhCccHHHH
Confidence 99977779999999999999999874
No 9
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.93 E-value=2.6e-25 Score=231.12 Aligned_cols=274 Identities=16% Similarity=0.126 Sum_probs=185.3
Q ss_pred hhcCCCceEEecCCCCC---CHH-------HHHHHHHcCCCeEEccceecc--cccc-------CcHH--HHHHh--hhC
Q psy7343 74 TQLGSPRFILAPMVDAS---ELP-------WRLLSRRYGSHLCYTPMVSAH--QFIA-------DKKL--RQEIL--MST 130 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~t---d~p-------FR~l~~~~Gadl~~TEMi~a~--~l~~-------~~~~--~~~~~--~~~ 130 (487)
.++ +|++++|||.+++ +.| ||..++ |+++++||++.+. +... +.+. .++.+ ..+
T Consensus 27 ~~L-~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~~avh 103 (402)
T 2hsa_B 27 FNL-SHRVVLAPMTRCRALNNIPQAALGEYYEQRAT--AGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVH 103 (402)
T ss_dssp EEE-SCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC--TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHHHHHH
T ss_pred EEe-cCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc--cCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 456 8899999999997 566 555554 6999999998875 3221 2221 24344 235
Q ss_pred CCCCceeeeeccccCCCCCccccccccCCCchHHHHHHHHhCCccceeccccchhhhcChh---HHHHHHhcCCCCCC--
Q psy7343 131 PEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKK---LRQEILMSTPEDRP-- 205 (487)
Q Consensus 131 ~~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~---~~~~~l~~~~~~~P-- 205 (487)
..+.++++||...+..... .+. | .|. +.+..+++..... ....- .......|
T Consensus 104 ~~G~~i~~QL~H~Gr~~~~-~~~-~---------------~g~-----~~~apS~v~~~~~~~~~~~~g-~~~~~~~p~~ 160 (402)
T 2hsa_B 104 AKGAVIFCQLWHVGRASHE-VYQ-P---------------AGA-----APISSTEKPISNRWRILMPDG-THGIYPKPRA 160 (402)
T ss_dssp HTTCEEEEEEECCTTSCCG-GGC-T---------------TCC-----CCEESCSCCCCTTCEEECTTS-CEEECCCCEE
T ss_pred hcCCeEEEEeccCCccccc-ccc-c---------------CCC-----ccccCCCcccccccccccccc-cccCCCCCcc
Confidence 5678999998554321111 100 0 010 0011111000000 00000 00000011
Q ss_pred eeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhcc-CcE
Q psy7343 206 LIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VPV 274 (487)
Q Consensus 206 v~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iPV 274 (487)
++..=-....++|+++|++++++ ||+||||+|| |..+.+.+.||+.++++++++.|++++|+++++ .||
T Consensus 161 mt~~eI~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V 240 (402)
T 2hsa_B 161 IGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRV 240 (402)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcE
Confidence 11100001246888999988776 9999999997 988999999999999999999999999999985 599
Q ss_pred EEEeeccc---------ccccHHHHHHHHHHcC------CcEEEEEccccCCCC--C--C-C-CCCCHHHHHHHHhhCCC
Q psy7343 275 SCKIRIYQ---------DVNKTVEYARMLERAG------CQLLAVHGRTVDQRG--M--N-T-GLASWEHITAVRKALTI 333 (487)
Q Consensus 275 ~vKiR~~~---------d~~~~~e~a~~le~~G------~d~I~VhgRt~~~~g--~--~-~-g~~~~~~i~~i~~~~~i 333 (487)
.+|++... +.++..++++.++++| +|+|.||+++..+.. . + . +...++.++++++.+++
T Consensus 241 ~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~i 320 (402)
T 2hsa_B 241 GVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQG 320 (402)
T ss_dssp EEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSS
T ss_pred EEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCC
Confidence 99998752 1235788999999999 999999998754310 0 0 0 11257889999999999
Q ss_pred cEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccccC
Q psy7343 334 PVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 334 PVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
|||++||| |++++++++++.+||+|++||+++.||+++.+
T Consensus 321 Pvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k 360 (402)
T 2hsa_B 321 TFICSGGY-TRELGIEAVAQGDADLVSYGRLFISNPDLVMR 360 (402)
T ss_dssp CEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred CEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHhCchHHHH
Confidence 99999999 99999999977779999999999999999874
No 10
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.92 E-value=2.4e-24 Score=217.16 Aligned_cols=221 Identities=15% Similarity=0.168 Sum_probs=172.8
Q ss_pred CCccccccccCCCchHHHHHHHHhCCccceeccccchhh--------------------hcCh--hHHHHHHhc--CCCC
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQF--------------------IADK--KLRQEILMS--TPED 203 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~L--------------------l~~~--~~~~~~l~~--~~~~ 203 (487)
++|+++|++.-..+..+...+.+.|++++.+++++.... +.++ +...+.+.. ...+
T Consensus 14 ~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~~~ 93 (314)
T 2e6f_A 14 ANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHDYSK 93 (314)
T ss_dssp SSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCCTTT
T ss_pred CCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhhcCC
Confidence 568888865411355666667888999888888774431 1222 111122332 2247
Q ss_pred CCeeeeeccCCHHHHHHHHHhhCCc-Cc---EEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEee
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAEPH-CD---GIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d---~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR 279 (487)
.|+++|+.+.+++++.+++++++++ +| +||||++||.. ++ +..+..+++.+.++++++++.+++||++|++
T Consensus 94 ~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~---~g--~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~ 168 (314)
T 2e6f_A 94 KPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV---PG--KPQVAYDFEAMRTYLQQVSLAYGLPFGVKMP 168 (314)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS---TT--CCCGGGSHHHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC---CC--chhhcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 8999999999999999999999887 79 99999999985 22 3445568999999999999999999999998
Q ss_pred cccccccHHHHHHHHHHcC-CcEEEEEcccc-----C------------CCCCCCCCC----CHHHHHHHHhhC-CCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAG-CQLLAVHGRTV-----D------------QRGMNTGLA----SWEHITAVRKAL-TIPVI 336 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G-~d~I~VhgRt~-----~------------~~g~~~g~~----~~~~i~~i~~~~-~iPVi 336 (487)
.+.+.++..++++.++++| +|+|.+|+++. . ..++++|.+ .++.++++++.+ ++|||
T Consensus 169 ~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi 248 (314)
T 2e6f_A 169 PYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVF 248 (314)
T ss_dssp CCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEE
Confidence 8777667888899999999 99999998771 0 112344543 378999999999 99999
Q ss_pred EcCCCCCHHHHHHHHHhcCCcEEEecccccc-CcccccC
Q psy7343 337 ANGNIQCLADVEACLAQTGVAGVMTAEGNLY-NPALFTG 374 (487)
Q Consensus 337 ~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~-~P~lf~~ 374 (487)
++|||+|++|+.+++ ..|||+||+||+++. +|++|.+
T Consensus 249 ~~GGI~~~~da~~~l-~~GAd~V~ig~~~l~~~p~~~~~ 286 (314)
T 2e6f_A 249 GCGGVYSGEDAFLHI-LAGASMVQVGTALQEEGPGIFTR 286 (314)
T ss_dssp EESSCCSHHHHHHHH-HHTCSSEEECHHHHHHCTTHHHH
T ss_pred EECCCCCHHHHHHHH-HcCCCEEEEchhhHhcCcHHHHH
Confidence 999999999999999 689999999999996 9999873
No 11
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.92 E-value=1e-23 Score=214.72 Aligned_cols=159 Identities=21% Similarity=0.263 Sum_probs=137.8
Q ss_pred HHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc---
Q psy7343 215 SKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY--- 281 (487)
Q Consensus 215 ~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~--- 281 (487)
.++|.++|++++++ ||+||||++| |..+.+.+.||+.++++.+++.+++++|++++++||.+|++..
T Consensus 143 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~ 222 (340)
T 3gr7_A 143 VQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYH 222 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 36789999988877 9999999996 9889999999999999999999999999999999999999874
Q ss_pred ---cccccHHHHHHHHHHcCCcEEEEEc-cccCCCCCCCC-CCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCC
Q psy7343 282 ---QDVNKTVEYARMLERAGCQLLAVHG-RTVDQRGMNTG-LASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGV 356 (487)
Q Consensus 282 ---~d~~~~~e~a~~le~~G~d~I~Vhg-Rt~~~~g~~~g-~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Ga 356 (487)
++.++..++++.+++.|+|+|.||. ++..+. ...+ ..+++.++++++.+++||+++|||+|+++++++++..+|
T Consensus 223 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~-~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~a 301 (340)
T 3gr7_A 223 PDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPAR-MNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRA 301 (340)
T ss_dssp TTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCC-CCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCC-CCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCe
Confidence 4567899999999999999999984 433221 1112 236899999999999999999999999999999965559
Q ss_pred cEEEeccccccCcccccC
Q psy7343 357 AGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 357 d~VmiGRa~l~~P~lf~~ 374 (487)
|+|++||+++.||+++.+
T Consensus 302 D~V~iGR~~lanPdl~~k 319 (340)
T 3gr7_A 302 DLVFLGRELLRNPYWPYA 319 (340)
T ss_dssp SEEEECHHHHHCTTHHHH
T ss_pred eEEEecHHHHhCchHHHH
Confidence 999999999999999864
No 12
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.91 E-value=3.5e-24 Score=219.84 Aligned_cols=185 Identities=18% Similarity=0.213 Sum_probs=151.0
Q ss_pred CCCeeeeeccC-----CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhh-------c
Q psy7343 203 DRPLIIQFCGN-----DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA-------V 270 (487)
Q Consensus 203 ~~Pv~Vqi~g~-----d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~-------~ 270 (487)
+.|+++||.++ +++++.++++.+.+.+|+||||+|||+. +| ..++.+++.+.++++++++. .
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~---~G---~~~l~~~~~l~~ll~av~~~~~~~~~~~ 219 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNT---AG---LRSLQGKAELRRLLTKVLQERDGLRRVH 219 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTS---TT---GGGGGSHHHHHHHHHHHHHHHHTSCGGG
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCC---CC---ccccCCHHHHHHHHHHHHHHHhhccccC
Confidence 57999999985 6789999999998889999999999975 22 22457899999999999764 6
Q ss_pred cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccC-----------CCCCCCCCCC----HHHHHHHHhhC--CC
Q psy7343 271 QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVD-----------QRGMNTGLAS----WEHITAVRKAL--TI 333 (487)
Q Consensus 271 ~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~-----------~~g~~~g~~~----~~~i~~i~~~~--~i 333 (487)
++||++|+|.+.+.++..++++.++++|+|+|++|+++.. ..++++|.+. ++.++++++.+ ++
T Consensus 220 ~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~i 299 (367)
T 3zwt_A 220 RPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRV 299 (367)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCS
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCc
Confidence 8999999998877778999999999999999999998742 2345777665 48899999999 89
Q ss_pred cEEEcCCCCCHHHHHHHHHhcCCcEEEeccccc-cCcccccCCCCCcHHHHHHHHHHHHHcC-hhHHHHH
Q psy7343 334 PVIANGNIQCLADVEACLAQTGVAGVMTAEGNL-YNPALFTGQTRPAWELASEYLDLVAQYP-VRLQYAR 401 (487)
Q Consensus 334 PVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l-~~P~lf~~~~~~~~~~~~~~l~~~~~~~-~~~~~~r 401 (487)
|||++|||.|.+|+.+++ ..|||+||+||+++ .+|++|.+ +.++..+++++.+ ..+.+++
T Consensus 300 pvI~~GGI~s~~da~~~l-~~GAd~V~vgra~l~~gP~~~~~-------i~~~l~~~m~~~G~~~i~e~~ 361 (367)
T 3zwt_A 300 PIIGVGGVSSGQDALEKI-RAGASLVQLYTALTFWGPPVVGK-------VKRELEALLKEQGFGGVTDAI 361 (367)
T ss_dssp CEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHHHCTHHHHH-------HHHHHHHHHHHTTCSSHHHHT
T ss_pred eEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHhcCcHHHHH-------HHHHHHHHHHHcCCCCHHHhh
Confidence 999999999999999999 58999999999995 57999873 3444445555554 2344444
No 13
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.91 E-value=5.9e-24 Score=216.21 Aligned_cols=165 Identities=18% Similarity=0.295 Sum_probs=139.3
Q ss_pred CCCCCeeeeeccCCHHHHHHHHHhhCCc-C-cEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEe
Q psy7343 201 PEDRPLIIQFCGNDSKNLTEAAKLAEPH-C-DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI 278 (487)
Q Consensus 201 ~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~-d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi 278 (487)
..+.|+++||.|.+++++.+++++++++ + |+||||++||+.. | +..+..+++.+.++++++++.+++||++|+
T Consensus 126 ~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~---G--~~~l~~~~e~l~~il~av~~~~~~PV~vKi 200 (345)
T 3oix_A 126 PDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP---G--XPQIAYDFETTDQILSEVFTYFTKPLGIKL 200 (345)
T ss_dssp TTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST---T--CCCGGGCHHHHHHHHHHHTTTCCSCEEEEE
T ss_pred cCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC---C--chhhcCCHHHHHHHHHHHHHHhCCCeEEEE
Confidence 4578999999999999999999999754 4 5999999999752 3 466778999999999999999999999999
Q ss_pred ecccccccHHHHHHHHHHcCCcEEE-------------EEcccc-----CCCCCCCCCCC----HHHHHHHHhhC--CCc
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLA-------------VHGRTV-----DQRGMNTGLAS----WEHITAVRKAL--TIP 334 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~-------------VhgRt~-----~~~g~~~g~~~----~~~i~~i~~~~--~iP 334 (487)
|.+. +..++++.++++|+++|. ||.|+. ...++++|++. |+.++++++.+ ++|
T Consensus 201 ~p~~---~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ip 277 (345)
T 3oix_A 201 PPYF---DIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQ 277 (345)
T ss_dssp CCCC---CHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSE
T ss_pred CCCC---CHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCc
Confidence 8763 567888888888776553 555543 23456788776 58899999999 799
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCcEEEeccc-cccCcccccC
Q psy7343 335 VIANGNIQCLADVEACLAQTGVAGVMTAEG-NLYNPALFTG 374 (487)
Q Consensus 335 Vi~nGgI~s~~da~~~l~~~Gad~VmiGRa-~l~~P~lf~~ 374 (487)
||++|||.|.+|+.+++ ..|||+||+||+ ++.+|++|.+
T Consensus 278 IIg~GGI~s~~da~~~l-~aGAd~V~igra~~~~gP~~~~~ 317 (345)
T 3oix_A 278 IIGTGGVXTGRDAFEHI-LCGASMVQIGTALHQEGPQIFKR 317 (345)
T ss_dssp EEEESSCCSHHHHHHHH-HHTCSEEEESHHHHHHCTHHHHH
T ss_pred EEEECCCCChHHHHHHH-HhCCCEEEEChHHHhcChHHHHH
Confidence 99999999999999999 689999999999 8999999873
No 14
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.91 E-value=1.3e-24 Score=221.72 Aligned_cols=167 Identities=16% Similarity=0.235 Sum_probs=143.8
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhC---Cc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEE
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAE---PH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCK 277 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~---~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vK 277 (487)
.+.|+++||.|.+++++.+++++++ +. +|+||||+|||+. ++ |..+..+++.+.++++++++.+++||++|
T Consensus 125 ~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~---~g--g~~l~~~~e~~~~il~av~~~~~~PV~vK 199 (354)
T 4ef8_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNV---PG--KPQVAYDFDAMRQCLTAVSEVYPHSFGVK 199 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS---TT--SCCGGGSHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC---CC--chhhccCHHHHHHHHHHHHHhhCCCeEEE
Confidence 3689999999999999999999988 33 8999999999975 23 56677899999999999999999999999
Q ss_pred eecccccccHHHHHHHHHHcC-CcEEEEEc------------ccc-----CCCCCCCCCC----CHHHHHHHHhhC-CCc
Q psy7343 278 IRIYQDVNKTVEYARMLERAG-CQLLAVHG------------RTV-----DQRGMNTGLA----SWEHITAVRKAL-TIP 334 (487)
Q Consensus 278 iR~~~d~~~~~e~a~~le~~G-~d~I~Vhg------------Rt~-----~~~g~~~g~~----~~~~i~~i~~~~-~iP 334 (487)
+|.+.|..+..++++.++++| +|+|++++ |+. ...++++|++ .|+.++++++.. ++|
T Consensus 200 i~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ip 279 (354)
T 4ef8_A 200 MPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKL 279 (354)
T ss_dssp ECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSE
T ss_pred ecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCC
Confidence 999888777888888899998 99998643 331 2334577754 589999999987 799
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC-cccccC
Q psy7343 335 VIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN-PALFTG 374 (487)
Q Consensus 335 Vi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~-P~lf~~ 374 (487)
||++|||.|.+|+.+++ ..|||+||+||+++.| |++|.+
T Consensus 280 II~~GGI~s~~da~~~l-~aGAd~V~vgra~l~~GP~~~~~ 319 (354)
T 4ef8_A 280 IFGCGGVYTGEDAFLHV-LAGASMVQVGTALQEEGPSIFER 319 (354)
T ss_dssp EEEESCCCSHHHHHHHH-HHTEEEEEECHHHHHHCTTHHHH
T ss_pred EEEECCcCCHHHHHHHH-HcCCCEEEEhHHHHHhCHHHHHH
Confidence 99999999999999999 6899999999999999 999873
No 15
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.91 E-value=2.2e-23 Score=230.65 Aligned_cols=264 Identities=16% Similarity=0.167 Sum_probs=185.2
Q ss_pred hhcCCCceEEecCCC-CCC--HHHHHHHHHc------CCCeEEccceecc--cccc-------CcH--HHHHHhh--hCC
Q psy7343 74 TQLGSPRFILAPMVD-ASE--LPWRLLSRRY------GSHLCYTPMVSAH--QFIA-------DKK--LRQEILM--STP 131 (487)
Q Consensus 74 ~~~~~~~~~LAPMag-~td--~pFR~l~~~~------Gadl~~TEMi~a~--~l~~-------~~~--~~~~~~~--~~~ 131 (487)
.++ +|++++|||++ .++ .+++.++..| |+++++|||++.. +... +.. ..++.+. .+.
T Consensus 14 ~~l-~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~ 92 (671)
T 1ps9_A 14 TTL-KNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQ 92 (671)
T ss_dssp CEE-SSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHH
T ss_pred EEE-cCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHh
Confidence 455 78999999998 555 3466665544 8999999998755 3221 111 1333332 345
Q ss_pred CCCceeeeeccccCCCCCccccccccCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeec
Q psy7343 132 EDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211 (487)
Q Consensus 132 ~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~ 211 (487)
.+.++++|+...+.....+..++|-+ .++. .+ ...+.+| ..+...+
T Consensus 93 ~g~~i~~Ql~h~Gr~~~~~~~~~ps~----~~~~-----~~-~~~p~~~--------t~~ei~~---------------- 138 (671)
T 1ps9_A 93 EGGKIALQILHTGRYSYQPHLVAPSA----LQAP-----IN-RFVPHEL--------SHEEILQ---------------- 138 (671)
T ss_dssp TTCCEEEEECCCGGGSBSTTCEESSS----CCCT-----TC-SSCCEEC--------CHHHHHH----------------
T ss_pred cCCEEEEEeccCCcccCCCCCcCCCC----cccc-----cC-CCCCccC--------CHHHHHH----------------
Confidence 67799999854432111111112111 0000 00 0000000 0000111
Q ss_pred cCCHHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 212 GNDSKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 212 g~d~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
-.++|.++|++++++ ||+||||+|| |..+.+.+.||+.+.++++++.++++++++++ ++||++|++
T Consensus 139 --~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls 216 (671)
T 1ps9_A 139 --LIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLS 216 (671)
T ss_dssp --HHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEE
T ss_pred --HHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 236788899888776 9999999998 88889999999999999999999999999998 789999998
Q ss_pred c------ccccccHHHHHHHHHHcCCcEEEEEccccCCCC----CCCCCC-CHHHHHHHHhhCCCcEEEcCCCCCHHHHH
Q psy7343 280 I------YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRG----MNTGLA-SWEHITAVRKALTIPVIANGNIQCLADVE 348 (487)
Q Consensus 280 ~------~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g----~~~g~~-~~~~i~~i~~~~~iPVi~nGgI~s~~da~ 348 (487)
. +++.++..++++.++++|+|+|.+|+++.+... .+.+.. .++.++++++.+++||+++|+|.|+++++
T Consensus 217 ~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~ 296 (671)
T 1ps9_A 217 MLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVAD 296 (671)
T ss_dssp EECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHH
T ss_pred ccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHH
Confidence 6 334557889999999999999999987654221 122222 35889999999999999999999999999
Q ss_pred HHHHhcCCcEEEeccccccCcccccC
Q psy7343 349 ACLAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 349 ~~l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
+++++.+||+|++||+++.||+++.+
T Consensus 297 ~~l~~g~aD~V~~gR~~l~~P~l~~k 322 (671)
T 1ps9_A 297 DILSRGDADMVSMARPFLADAELLSK 322 (671)
T ss_dssp HHHHTTSCSEEEESTHHHHCTTHHHH
T ss_pred HHHHcCCCCEEEeCHHHHhCcHHHHH
Confidence 99976669999999999999999864
No 16
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.91 E-value=8.7e-24 Score=215.13 Aligned_cols=218 Identities=19% Similarity=0.162 Sum_probs=166.9
Q ss_pred CCccccccccCCCchH-HHHHHHHhCCccceeccccchhh-----------------h-----cCh--hHHHHHHhcCCC
Q psy7343 148 SPRFILAPMVDASELP-WRLLSRRYGSHLCYTPMVSAHQF-----------------I-----ADK--KLRQEILMSTPE 202 (487)
Q Consensus 148 ~~~~~lApma~~td~~-fr~i~~~~Ga~l~~t~~v~~~~L-----------------l-----~~~--~~~~~~l~~~~~ 202 (487)
++|+++|+ +.++.+ +...+.+.|++++.+++++.... + .++ +...+.+.....
T Consensus 55 ~npi~~aa--g~~~~~~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~ 132 (336)
T 1f76_A 55 KNPLGLAA--GLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHY 132 (336)
T ss_dssp SSSEEECT--TSSTTCCCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCC
T ss_pred CCCcEeCc--ccCCcHHHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhccc
Confidence 56888885 344333 66667788998887777763311 1 111 122233333333
Q ss_pred CCCeeeeeccCC-------HHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-----
Q psy7343 203 DRPLIIQFCGND-------SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV----- 270 (487)
Q Consensus 203 ~~Pv~Vqi~g~d-------~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~----- 270 (487)
+.|+++|+.+++ .+++.++++++++.+|+|+||++||..+ | .....+++.+.++++++++.+
T Consensus 133 ~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~---g---~~~~~~~~~~~~il~~vr~~~~~~~~ 206 (336)
T 1f76_A 133 DGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTP---G---LRTLQYGEALDDLLTAIKNKQNDLQA 206 (336)
T ss_dssp CSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSST---T---GGGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCC---C---cccccCHHHHHHHHHHHHHHHHhhhh
Confidence 569999999876 8899999998877799999999999742 2 223457999999999999988
Q ss_pred ----cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccC-----------CCCCCCCCCC----HHHHHHHHhhC
Q psy7343 271 ----QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVD-----------QRGMNTGLAS----WEHITAVRKAL 331 (487)
Q Consensus 271 ----~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~-----------~~g~~~g~~~----~~~i~~i~~~~ 331 (487)
++||++|++.+.+.++..++++.++++|+|+|.+|+++.. ..++++|.+. ++.++++++.+
T Consensus 207 ~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~ 286 (336)
T 1f76_A 207 MHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL 286 (336)
T ss_dssp HHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH
T ss_pred cccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh
Confidence 8999999987766667899999999999999999987632 1223455433 47888999988
Q ss_pred --CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccccc-CcccccC
Q psy7343 332 --TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLY-NPALFTG 374 (487)
Q Consensus 332 --~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~-~P~lf~~ 374 (487)
++|||++|||+|++|+.+++ ..|||+||+||+++. ||++|.+
T Consensus 287 ~~~ipVi~~GGI~~~~da~~~l-~~GAd~V~igr~~l~~~P~~~~~ 331 (336)
T 1f76_A 287 NGRLPIIGVGGIDSVIAAREKI-AAGASLVQIYSGFIFKGPPLIKE 331 (336)
T ss_dssp TTSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHHHCHHHHHH
T ss_pred CCCCCEEEECCCCCHHHHHHHH-HCCCCEEEeeHHHHhcCcHHHHH
Confidence 89999999999999999999 589999999999998 9999874
No 17
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.90 E-value=2.7e-23 Score=214.69 Aligned_cols=178 Identities=19% Similarity=0.194 Sum_probs=146.3
Q ss_pred CCCeeeeeccCC-----HHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-------
Q psy7343 203 DRPLIIQFCGND-----SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV------- 270 (487)
Q Consensus 203 ~~Pv~Vqi~g~d-----~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~------- 270 (487)
..|+++||.+++ .+++.++++.+.+.+|+||||++||+. . |..++.+++.+.++++++++..
T Consensus 181 ~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt---~---Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~ 254 (415)
T 3i65_A 181 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNT---P---GLRDNQEAGKLKNIILSVKEEIDNLEKNN 254 (415)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------------CCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCC---C---CcccccCHHHHHHHHHHHHHHHHhhcccc
Confidence 457999999876 789999999999889999999999975 1 4456689999999999998762
Q ss_pred -------------cCc-EEEEeecccccccHHHHHHHHHHcCCcEEEEEccccC---------CCCCCCCCCCH----HH
Q psy7343 271 -------------QVP-VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVD---------QRGMNTGLASW----EH 323 (487)
Q Consensus 271 -------------~iP-V~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~---------~~g~~~g~~~~----~~ 323 (487)
++| |++|++.+++.++..++++.++++|+|+|++|+++.. +.++++|.+.+ +.
T Consensus 255 ~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~ 334 (415)
T 3i65_A 255 IMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKF 334 (415)
T ss_dssp CSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHH
T ss_pred cccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHH
Confidence 689 9999999877778999999999999999999998863 24567887776 78
Q ss_pred HHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC-cccccCCCCCcHHHHHHHHHHHHHcC
Q psy7343 324 ITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN-PALFTGQTRPAWELASEYLDLVAQYP 394 (487)
Q Consensus 324 i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~-P~lf~~~~~~~~~~~~~~l~~~~~~~ 394 (487)
++++++.+ ++|||++|||.|.+|+.+++ ..|||+|||||+++.+ |++|.+ +.++..+++++.+
T Consensus 335 I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l-~aGAd~VqIgra~l~~GP~~~~~-------i~~~L~~~l~~~G 400 (415)
T 3i65_A 335 ICEMYNYTNKQIPIIASGGIFSGLDALEKI-EAGASVCQLYSCLVFNGMKSAVQ-------IKRELNHLLYQRG 400 (415)
T ss_dssp HHHHHHHTTTCSCEEECSSCCSHHHHHHHH-HHTEEEEEESHHHHHHGGGHHHH-------HHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHHhcCHHHHHH-------HHHHHHHHHHHcC
Confidence 99999998 79999999999999999999 5899999999999988 999873 3444445555543
No 18
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.89 E-value=7.3e-23 Score=228.47 Aligned_cols=160 Identities=11% Similarity=0.123 Sum_probs=136.4
Q ss_pred HHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecc-
Q psy7343 215 SKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIY- 281 (487)
Q Consensus 215 ~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~- 281 (487)
.++|.++|++++++ ||+||||++| |..+.+.+.||+.+.++++++.|++++|++++ ++||++|++..
T Consensus 148 i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 148 QQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 46889999988877 9999999999 88899999999999999999999999999999 78999999862
Q ss_pred ------cc-cccHHHHHHHHHHcCCcEEEEEccccC------CCCCCCCCC-CHHHHHHHHhhCCCcEEEcCCCCCHHHH
Q psy7343 282 ------QD-VNKTVEYARMLERAGCQLLAVHGRTVD------QRGMNTGLA-SWEHITAVRKALTIPVIANGNIQCLADV 347 (487)
Q Consensus 282 ------~d-~~~~~e~a~~le~~G~d~I~VhgRt~~------~~g~~~g~~-~~~~i~~i~~~~~iPVi~nGgI~s~~da 347 (487)
++ .++..++++.+++ |+|.+.+|+++.. ....+.+.. +++.++++++.+++|||++|+|.|++++
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a 306 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKM 306 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHH
T ss_pred CcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHH
Confidence 33 4577889999988 7999999887511 111122333 5788999999999999999999999999
Q ss_pred HHHHHhcCCcEEEeccccccCcccccCC
Q psy7343 348 EACLAQTGVAGVMTAEGNLYNPALFTGQ 375 (487)
Q Consensus 348 ~~~l~~~Gad~VmiGRa~l~~P~lf~~~ 375 (487)
++++++.+||+|++||++++||+++.+.
T Consensus 307 ~~~l~~g~aD~V~~gR~~l~~P~~~~~~ 334 (729)
T 1o94_A 307 IEIVTKGYADIIGCARPSIADPFLPQKV 334 (729)
T ss_dssp HHHHHTTSCSBEEESHHHHHCTTHHHHH
T ss_pred HHHHHCCCCCEEEeCchhhcCchHHHHH
Confidence 9999777799999999999999998643
No 19
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.89 E-value=8.7e-23 Score=207.79 Aligned_cols=161 Identities=20% Similarity=0.221 Sum_probs=137.6
Q ss_pred HHHHHHHHHhhCCc-CcEEEee---------cCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecc-
Q psy7343 215 SKNLTEAAKLAEPH-CDGIDIN---------IGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIY- 281 (487)
Q Consensus 215 ~~~~~~aa~~~~~~-~d~IdiN---------~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~- 281 (487)
.++|.++|++++++ ||+|||| +.||..+.+.+.||+.+.++.+++.|++++|++++ ++||.+|++..
T Consensus 142 i~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~ 221 (343)
T 3kru_A 142 VKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADD 221 (343)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred HHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechh
Confidence 36789999988877 9999999 56899999999999999999999999999999999 68999999873
Q ss_pred -----cccccHHHHHHHHHHcCCcEEEE-EccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcC
Q psy7343 282 -----QDVNKTVEYARMLERAGCQLLAV-HGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTG 355 (487)
Q Consensus 282 -----~d~~~~~e~a~~le~~G~d~I~V-hgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~G 355 (487)
++.++..++++.++++ +|+|.+ +|++..+........+++.++++++.+++||+++|+|+|++++++++++.+
T Consensus 222 ~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~ 300 (343)
T 3kru_A 222 YMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNER 300 (343)
T ss_dssp SSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTS
T ss_pred hhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchh
Confidence 2356788999999999 999999 576544221111224689999999999999999999999999999997666
Q ss_pred CcEEEeccccccCcccccCCC
Q psy7343 356 VAGVMTAEGNLYNPALFTGQT 376 (487)
Q Consensus 356 ad~VmiGRa~l~~P~lf~~~~ 376 (487)
||+|++||+++.||+++.+..
T Consensus 301 aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 301 ADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp CSEEEESHHHHHCTTHHHHTC
T ss_pred hHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999998664
No 20
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.89 E-value=1.8e-22 Score=206.52 Aligned_cols=160 Identities=20% Similarity=0.242 Sum_probs=137.1
Q ss_pred HHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeec--
Q psy7343 215 SKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRI-- 280 (487)
Q Consensus 215 ~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~-- 280 (487)
.++|.++|+++.++ ||+||||++| |..+.+.+.||+.+.++.+++.+++++|++++ ++||.+|++.
T Consensus 151 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~ 230 (349)
T 3hgj_A 151 LQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEecccc
Confidence 46788999988777 9999999999 99999999999999999999999999999999 7899999987
Q ss_pred ----ccccccHHHHHHHHHHcCCcEEEEE-ccccCCCCCCCC-CCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhc
Q psy7343 281 ----YQDVNKTVEYARMLERAGCQLLAVH-GRTVDQRGMNTG-LASWEHITAVRKALTIPVIANGNIQCLADVEACLAQT 354 (487)
Q Consensus 281 ----~~d~~~~~e~a~~le~~G~d~I~Vh-gRt~~~~g~~~g-~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~ 354 (487)
+++.++..++++.+++.|+|+|.+| |++........+ ..+++.++++++.+++||+++|+|.|+++++++++..
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAG 310 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTT
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCC
Confidence 3456678999999999999999998 454322111112 2467899999999999999999999999999999655
Q ss_pred CCcEEEeccccccCcccccC
Q psy7343 355 GVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 355 Gad~VmiGRa~l~~P~lf~~ 374 (487)
.||+|++||+++.||+++.+
T Consensus 311 ~aD~V~iGR~~lanPdl~~k 330 (349)
T 3hgj_A 311 SADLVLLGRVLLRDPYFPLR 330 (349)
T ss_dssp SCSEEEESTHHHHCTTHHHH
T ss_pred CceEEEecHHHHhCchHHHH
Confidence 59999999999999999763
No 21
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.89 E-value=2.3e-22 Score=202.03 Aligned_cols=164 Identities=24% Similarity=0.387 Sum_probs=137.6
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCC-c-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeec
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEP-H-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRI 280 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~-~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~ 280 (487)
+.|+.+|+++.+++++.++++++++ . +|+||||++||..+ ++ |..+..+++.+.++++++++.+++||++|++.
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~--~g--~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~ 173 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVK--HG--GQAFGTDPEVAAALVKACKAVSKVPLYVKLSP 173 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGG--GT--TEEGGGCHHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCC--Cc--hhhhcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 7899999999999999999999986 4 99999999998742 22 33444689999999999999989999999975
Q ss_pred ccccccHHHHHHHHHHcCCcEEEE---------EccccCC-----CCCCCCCCC----HHHHHHHHhhCCCcEEEcCCCC
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAV---------HGRTVDQ-----RGMNTGLAS----WEHITAVRKALTIPVIANGNIQ 342 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~V---------hgRt~~~-----~g~~~g~~~----~~~i~~i~~~~~iPVi~nGgI~ 342 (487)
+ ..+..++++.++++|+|+|.+ |+|++.. .++++|.+. ++.++++++.+++|||++|||.
T Consensus 174 ~--~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~ 251 (311)
T 1ep3_A 174 N--VTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVA 251 (311)
T ss_dssp C--SSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCC
T ss_pred C--hHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcC
Confidence 4 346788999999999999999 4444321 123556655 4788899999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEeccccccCccccc
Q psy7343 343 CLADVEACLAQTGVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 343 s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~ 373 (487)
|.+|+.+++ ..|||+|++||+++.+|+++.
T Consensus 252 ~~~d~~~~l-~~GAd~V~vg~~~l~~p~~~~ 281 (311)
T 1ep3_A 252 NAQDVLEMY-MAGASAVAVGTANFADPFVCP 281 (311)
T ss_dssp SHHHHHHHH-HHTCSEEEECTHHHHCTTHHH
T ss_pred CHHHHHHHH-HcCCCEEEECHHHHcCcHHHH
Confidence 999999999 589999999999999999876
No 22
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.89 E-value=1.8e-22 Score=211.23 Aligned_cols=165 Identities=18% Similarity=0.179 Sum_probs=140.4
Q ss_pred CCCeeeeeccCC-----HHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhh--------
Q psy7343 203 DRPLIIQFCGND-----SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA-------- 269 (487)
Q Consensus 203 ~~Pv~Vqi~g~d-----~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~-------- 269 (487)
..|+++||.+++ .+++.++++.+.+.+|+||||++||+.. |...+.+++.+.+++++++++
T Consensus 179 ~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~------Glr~lq~~~~l~~il~~v~~~~~~~~~~~ 252 (443)
T 1tv5_A 179 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNN 252 (443)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHHHHHHC---
T ss_pred CceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCc------ccccccCHHHHHHHHHHHHHHHhhhcccC
Confidence 468999999887 8899999999988899999999999751 344456899999999999864
Q ss_pred ------------------------------------------ccCc-EEEEeecccccccHHHHHHHHHHcCCcEEEEEc
Q psy7343 270 ------------------------------------------VQVP-VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHG 306 (487)
Q Consensus 270 ------------------------------------------~~iP-V~vKiR~~~d~~~~~e~a~~le~~G~d~I~Vhg 306 (487)
.++| |++|++.+.+.++..++++.++++|+|+|++|+
T Consensus 253 ~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~n 332 (443)
T 1tv5_A 253 IMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISN 332 (443)
T ss_dssp -----------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred ccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEC
Confidence 3679 999998877666889999999999999999999
Q ss_pred cccC---------CCCCCCCCCC----HHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccccc-Ccc
Q psy7343 307 RTVD---------QRGMNTGLAS----WEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLY-NPA 370 (487)
Q Consensus 307 Rt~~---------~~g~~~g~~~----~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~-~P~ 370 (487)
++.. ..++++|.+. ++.++++++.+ ++|||++|||.|++|+.+++ ..|||+||+||+++. +|+
T Consensus 333 tt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l-~aGAd~Vqigrall~~gP~ 411 (443)
T 1tv5_A 333 TTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKI-EAGASVCQLYSCLVFNGMK 411 (443)
T ss_dssp CBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHH-HTTEEEEEESHHHHHHGGG
T ss_pred CCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHHhcChH
Confidence 8763 2344566543 57899999999 89999999999999999999 689999999999886 999
Q ss_pred cccC
Q psy7343 371 LFTG 374 (487)
Q Consensus 371 lf~~ 374 (487)
++.+
T Consensus 412 l~~~ 415 (443)
T 1tv5_A 412 SAVQ 415 (443)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9874
No 23
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.88 E-value=8.8e-23 Score=226.51 Aligned_cols=269 Identities=12% Similarity=0.039 Sum_probs=179.6
Q ss_pred hhcCCCceEEecCCCCCCHH-------HHHHHHHcCCCeEEccceeccccc----------cCcH--HHHHHhh--hCCC
Q psy7343 74 TQLGSPRFILAPMVDASELP-------WRLLSRRYGSHLCYTPMVSAHQFI----------ADKK--LRQEILM--STPE 132 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~td~p-------FR~l~~~~Gadl~~TEMi~a~~l~----------~~~~--~~~~~~~--~~~~ 132 (487)
.++ +|++++|||++.+..+ |+....+.|+++++||++.....- .+.. ..++.+. .+..
T Consensus 23 ~~l-~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~ 101 (690)
T 3k30_A 23 FTT-KNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEG 101 (690)
T ss_dssp EEC-SSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHT
T ss_pred EEE-CCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhc
Confidence 455 8899999999776533 666677789999999998754322 1111 1112221 2445
Q ss_pred CCceeeeeccccCCCCCccccccccCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeec-
Q psy7343 133 DRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC- 211 (487)
Q Consensus 133 e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~- 211 (487)
..++++|+...+..... . . .|. +-+..+++-..... .....|--....
T Consensus 102 g~~i~~Ql~h~Gr~~~~------~--~-----------~~~-----~~~~ps~~~~~~~~-------~~~~~p~~~t~~e 150 (690)
T 3k30_A 102 GGLAGIELAHNGMNAPN------Q--L-----------SRE-----TPLGPGHLPVAPDT-------IAPIQARAMTKQD 150 (690)
T ss_dssp TCEEEEEEECCGGGCCC------T--T-----------TCC-----CCEESSSCBSCSSC-------CCSCBCEECCHHH
T ss_pred CCEEEEEccCCcccccc------c--c-----------cCC-----CccCCCCCcccccc-------cCCCCCCcCCHHH
Confidence 67899998543221100 0 0 000 00111110000000 000001000000
Q ss_pred -cCCHHHHHHHHHhhCCc-CcEEEeecCCCc----------ceeeccCccccccCChHHHHHHHHHHhhhcc--CcEEEE
Q psy7343 212 -GNDSKNLTEAAKLAEPH-CDGIDINIGCPQ----------MVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ--VPVSCK 277 (487)
Q Consensus 212 -g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~----------~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~--iPV~vK 277 (487)
..-.++|.++|++++++ ||+||||++|+. .+.+.+.||+.+.++.+++.|++++|+++++ +||.+|
T Consensus 151 i~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r 230 (690)
T 3k30_A 151 IDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACR 230 (690)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEE
Confidence 01246889999998887 999999998754 5889999999999999999999999999994 566666
Q ss_pred eec------ccccccHHHHHHHHHHcCCcEEEEEccccCC---CCCCCC-CCCHHHHHHHHhhCCCcEEEcCCCCCHHHH
Q psy7343 278 IRI------YQDVNKTVEYARMLERAGCQLLAVHGRTVDQ---RGMNTG-LASWEHITAVRKALTIPVIANGNIQCLADV 347 (487)
Q Consensus 278 iR~------~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~---~g~~~g-~~~~~~i~~i~~~~~iPVi~nGgI~s~~da 347 (487)
+.. |++.++..++++.+++ |+|.+.||+++... ...+.+ ...++.++++++.+++|||++|+|++++++
T Consensus 231 ~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a 309 (690)
T 3k30_A 231 ITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAM 309 (690)
T ss_dssp EECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHH
T ss_pred ECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHH
Confidence 533 2334567889999988 89999999865211 111222 234688999999999999999999999999
Q ss_pred HHHHHhcCCcEEEeccccccCcccccCC
Q psy7343 348 EACLAQTGVAGVMTAEGNLYNPALFTGQ 375 (487)
Q Consensus 348 ~~~l~~~Gad~VmiGRa~l~~P~lf~~~ 375 (487)
++++++.+||+|++||++++|||++.+.
T Consensus 310 ~~~l~~g~~d~v~~gR~~~~~P~~~~~~ 337 (690)
T 3k30_A 310 VRQIKAGILDLIGAARPSIADPFLPNKI 337 (690)
T ss_dssp HHHHHTTSCSEEEESHHHHHCTTHHHHH
T ss_pred HHHHHCCCcceEEEcHHhHhCccHHHHH
Confidence 9999777799999999999999998754
No 24
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.88 E-value=1.1e-21 Score=201.69 Aligned_cols=160 Identities=18% Similarity=0.242 Sum_probs=135.7
Q ss_pred HHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecc-
Q psy7343 215 SKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIY- 281 (487)
Q Consensus 215 ~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~- 281 (487)
.++|.++|++++++ ||+||||++| |..+.+.+.||+.+.++.+++.+++++|++++ ++||.+|++..
T Consensus 157 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~ 236 (363)
T 3l5l_A 157 KQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLE 236 (363)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchh
Confidence 36788999988877 9999999984 88899999999999999999999999999998 58999999863
Q ss_pred ------cccccHHHHHHHHHHcCCcEEEEEccccCCCC-CCCCC-CCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHh
Q psy7343 282 ------QDVNKTVEYARMLERAGCQLLAVHGRTVDQRG-MNTGL-ASWEHITAVRKALTIPVIANGNIQCLADVEACLAQ 353 (487)
Q Consensus 282 ------~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g-~~~g~-~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~ 353 (487)
++.++..++++.+++.|+|+|.||+++..... ...++ .+++.++++++.+++||+++|||+|+++++++++.
T Consensus 237 ~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~ 316 (363)
T 3l5l_A 237 YDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQA 316 (363)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHT
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHC
Confidence 44567888999999999999999875432110 01122 36789999999999999999999999999999965
Q ss_pred cCCcEEEeccccccCcccccC
Q psy7343 354 TGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 354 ~Gad~VmiGRa~l~~P~lf~~ 374 (487)
.+||+|++||+++.||+++.+
T Consensus 317 G~aD~V~iGR~~lanPdl~~k 337 (363)
T 3l5l_A 317 NQLDLVSVGRAHLADPHWAYF 337 (363)
T ss_dssp TSCSEEECCHHHHHCTTHHHH
T ss_pred CCccEEEecHHHHhCchHHHH
Confidence 559999999999999999863
No 25
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.87 E-value=4.9e-21 Score=220.95 Aligned_cols=267 Identities=21% Similarity=0.263 Sum_probs=190.4
Q ss_pred CCceEEecCCCCCCHHHHHHHHHcCCCeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCcccccccc
Q psy7343 78 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPMV 157 (487)
Q Consensus 78 ~~~~~LAPMag~td~pFR~l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lApma 157 (487)
++++++|||.+.++.+|+..+.+.|.+.+.++.+..+.-.-. ...|-.+.+.-. |.
T Consensus 543 ~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~g------------n~~pr~~~~~~~---g~--------- 598 (1025)
T 1gte_A 543 INPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVT------------NVSPRIVRGTTS---GP--------- 598 (1025)
T ss_dssp SSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCC------------CCSSCEEECCTT---CS---------
T ss_pred cCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccC------------CCCccEEecccc---cc---------
Confidence 678999999999999999999999999999888776532101 112222221000 00
Q ss_pred CCCchHHHHHHHHhCC---ccceeccccchhhhcChhHHHHHHhcCCCCCCeeeee-ccCCHHHHHHHHHhhCCc-CcEE
Q psy7343 158 DASELPWRLLSRRYGS---HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQF-CGNDSKNLTEAAKLAEPH-CDGI 232 (487)
Q Consensus 158 ~~td~~fr~i~~~~Ga---~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi-~g~d~~~~~~aa~~~~~~-~d~I 232 (487)
.+|. .+..+++++...+....+...++ +....+.|+++++ .+.+++++.++++++++. +|+|
T Consensus 599 ------------~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~-~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~i 665 (1025)
T 1gte_A 599 ------------MYGPGQSSFLNIELISEKTAAYWCQSVTEL-KADFPDNIVIASIMCSYNKNDWMELSRKAEASGADAL 665 (1025)
T ss_dssp ------------CCSSCCSCEEECCCSCSSCHHHHHHHHHHH-HHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEE
T ss_pred ------------ccCCchhheeeeccccchhHHHHHHHHHHH-HhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 0111 13455555543332221112222 2222357899987 478999999999998765 9999
Q ss_pred EeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEE--------
Q psy7343 233 DINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAV-------- 304 (487)
Q Consensus 233 diN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~V-------- 304 (487)
+||++||.. ...+.+|+.+..+++.+.++++++++.+++||++|++. +..+..++++.++++|+|+|.+
T Consensus 666 ein~~~P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~--~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~ 742 (1025)
T 1gte_A 666 ELNLSCPHG-MGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTP--NVTDIVSIARAAKEGGADGVTATNTVSGLM 742 (1025)
T ss_dssp EEECCCBCC-CC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECS--CSSCHHHHHHHHHHHTCSEEEECCCEEECC
T ss_pred EEECCCCCC-CCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCC--ChHHHHHHHHHHHHcCCCEEEEeccccccc
Confidence 999999987 33445788888999999999999999999999999975 4557899999999999999999
Q ss_pred --------------EccccCCCCCCCCCCCH----HHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 305 --------------HGRTVDQRGMNTGLASW----EHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 305 --------------hgRt~~~~g~~~g~~~~----~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
|||+.. ++++|.+.| +.++++++.+ ++|||++|||.|.+|+.+++ ..|||+||+||++
T Consensus 743 ~~~~~~~~~~~~~~~gr~~~--gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~~da~~~l-~~Ga~~v~vg~~~ 819 (1025)
T 1gte_A 743 GLKADGTPWPAVGAGKRTTY--GGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSAESGLQFL-HSGASVLQVCSAV 819 (1025)
T ss_dssp CBCTTSCBSSCBTTTTBBCC--EEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSHHHHHHHH-HTTCSEEEESHHH
T ss_pred cccccccccccccccccccC--CCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCHHHHHHHH-HcCCCEEEEeecc
Confidence 444432 347777775 7899999998 99999999999999999999 5899999999999
Q ss_pred ccCcc-cccCCCCCcHHHHHHHHHHHHHcC
Q psy7343 366 LYNPA-LFTGQTRPAWELASEYLDLVAQYP 394 (487)
Q Consensus 366 l~~P~-lf~~~~~~~~~~~~~~l~~~~~~~ 394 (487)
+.+|+ ++. +...++..++...+
T Consensus 820 l~~~~~~~~-------~~~~~l~~~l~~~G 842 (1025)
T 1gte_A 820 QNQDFTVIQ-------DYCTGLKALLYLKS 842 (1025)
T ss_dssp HTSCTTHHH-------HHHHHHHHHHHHTT
T ss_pred ccCCccHHH-------HHHHHHHHHHHHcC
Confidence 98544 443 33344444555544
No 26
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.83 E-value=6.4e-21 Score=198.82 Aligned_cols=158 Identities=16% Similarity=0.174 Sum_probs=135.3
Q ss_pred HHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccc-cCChHHHHHHHHHHhhhc------cCcEEEEe
Q psy7343 216 KNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYL-QDDWPLLTNLVSSLRQAV------QVPVSCKI 278 (487)
Q Consensus 216 ~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l-~~d~~~i~eiv~~v~~~~------~iPV~vKi 278 (487)
++|.++|+++.++ ||+||||+|| |..+.+.+.||+.+ +++.+++.|++++|++++ ++||.+|+
T Consensus 170 ~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRi 249 (419)
T 3l5a_A 170 QQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRA 249 (419)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEec
Confidence 6788999988877 9999999998 98899999999998 999999999999999987 67899998
Q ss_pred ec--------ccccccHHHHHHHHHH-cCCcEEEEEccccCCC---CCCCCC-CCHHHHHHHHhhC--CCcEEEcCCCCC
Q psy7343 279 RI--------YQDVNKTVEYARMLER-AGCQLLAVHGRTVDQR---GMNTGL-ASWEHITAVRKAL--TIPVIANGNIQC 343 (487)
Q Consensus 279 R~--------~~d~~~~~e~a~~le~-~G~d~I~VhgRt~~~~---g~~~g~-~~~~~i~~i~~~~--~iPVi~nGgI~s 343 (487)
+. |++.++..++++.+++ .|+|+|.||+++.... ....+. .+++.++.+++.+ ++|||++|||+|
T Consensus 250 s~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t 329 (419)
T 3l5a_A 250 TPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINS 329 (419)
T ss_dssp CSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCS
T ss_pred ccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCC
Confidence 87 4456678999999999 9999999998865211 112233 2567888999988 699999999999
Q ss_pred HHHHHHHHHhcCCcEEEeccccccCcccccCC
Q psy7343 344 LADVEACLAQTGVAGVMTAEGNLYNPALFTGQ 375 (487)
Q Consensus 344 ~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~~ 375 (487)
+++++++++. ||+|++||+++.||+|+.+.
T Consensus 330 ~e~Ae~~L~~--aDlVaiGR~~IanPdlv~ki 359 (419)
T 3l5a_A 330 PESALDALQH--ADMVGMSSPFVTEPDFVHKL 359 (419)
T ss_dssp HHHHHHHGGG--CSEEEESTHHHHCTTHHHHH
T ss_pred HHHHHHHHHh--CCcHHHHHHHHHCcHHHHHH
Confidence 9999999955 99999999999999998654
No 27
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.82 E-value=4e-20 Score=191.17 Aligned_cols=157 Identities=18% Similarity=0.146 Sum_probs=128.5
Q ss_pred HH-HHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhcc-CcEEEEeeccc-
Q psy7343 216 KN-LTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VPVSCKIRIYQ- 282 (487)
Q Consensus 216 ~~-~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iPV~vKiR~~~- 282 (487)
++ |.++|++++++ ||+||||+|| |..+.+.+.||+.++++.+++.+++++|+++++ .||.++++...
T Consensus 167 ~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~ 246 (407)
T 3tjl_A 167 YEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWAT 246 (407)
T ss_dssp HTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccc
Confidence 56 88889888777 9999999999 989999999999999999999999999999985 48888887521
Q ss_pred --------c----cccHHHHHHHH---HHcC--CcEEEEE-ccccCCCCCCCCC-CCHHHHHHHHhhCCCcEEEcCCCCC
Q psy7343 283 --------D----VNKTVEYARML---ERAG--CQLLAVH-GRTVDQRGMNTGL-ASWEHITAVRKALTIPVIANGNIQC 343 (487)
Q Consensus 283 --------d----~~~~~e~a~~l---e~~G--~d~I~Vh-gRt~~~~g~~~g~-~~~~~i~~i~~~~~iPVi~nGgI~s 343 (487)
| ..+..++++.+ ++.| +|+|+|| +|+..+. ..+. ..++.+..+++..++|||+||||.+
T Consensus 247 ~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~--~~~~~~~~~~~~~ir~~~~~PvI~~Ggi~~ 324 (407)
T 3tjl_A 247 FQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNV--DVSEEDQAGDNEFVSKIWKGVILKAGNYSY 324 (407)
T ss_dssp GGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTE--ECCGGGCCCCSHHHHHHCCSEEEEESCGGG
T ss_pred cCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCC--cCCccchhHHHHHHHHHhCCCEEecCCCCC
Confidence 1 22467888899 8889 9999998 6765432 1111 1234567788888999999999999
Q ss_pred HHHHHHHHHh---cCCcEEEeccccccCcccccC
Q psy7343 344 LADVEACLAQ---TGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 344 ~~da~~~l~~---~Gad~VmiGRa~l~~P~lf~~ 374 (487)
.+|+.++++. .+||+|++||+++.||||+.+
T Consensus 325 ~~dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~r 358 (407)
T 3tjl_A 325 DAPEFKTLKEDIADKRTLVGFSRYFTSNPNLVWK 358 (407)
T ss_dssp GTTTTHHHHHHHTTSSEEEECSHHHHHCTTHHHH
T ss_pred HHHHHHHHHhhccCCCeEEEeChhhhhCchHHHH
Confidence 9988888766 789999999999999999864
No 28
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.82 E-value=2.5e-20 Score=190.82 Aligned_cols=150 Identities=19% Similarity=0.195 Sum_probs=130.1
Q ss_pred HHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhccC-cEEEEeecccc
Q psy7343 215 SKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQV-PVSCKIRIYQD 283 (487)
Q Consensus 215 ~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~i-PV~vKiR~~~d 283 (487)
.++|+++|+++.++ ||+||||++| |..+.+.+.||+.+.++.+++.|++++|+++++. ||.+|++....
T Consensus 152 i~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~ 231 (362)
T 4ab4_A 152 VEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRAD 231 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecccc
Confidence 36788999988777 9999999999 9889999999999999999999999999999843 99999986421
Q ss_pred ---------cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhc
Q psy7343 284 ---------VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQT 354 (487)
Q Consensus 284 ---------~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~ 354 (487)
.++..++++.+++.|+|.|.||+++ . +. +.++++++.+++|||++|+| |+++++++++..
T Consensus 232 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~---~----~~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~g 300 (362)
T 4ab4_A 232 AHDMGDADRAETFTYVARELGKRGIAFICSRERE---A----DD---SIGPLIKEAFGGPYIVNERF-DKASANAALASG 300 (362)
T ss_dssp SSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC---C----TT---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTT
T ss_pred ccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC---C----CH---HHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHcC
Confidence 2356888999999999999999886 1 11 35788899999999999999 999999999777
Q ss_pred CCcEEEeccccccCcccccCC
Q psy7343 355 GVAGVMTAEGNLYNPALFTGQ 375 (487)
Q Consensus 355 Gad~VmiGRa~l~~P~lf~~~ 375 (487)
+||+|++||+++.||+++.++
T Consensus 301 ~aD~V~iGR~~lanPdl~~k~ 321 (362)
T 4ab4_A 301 KADAVAFGVPFIANPDLPARL 321 (362)
T ss_dssp SCSEEEESHHHHHCTTHHHHH
T ss_pred CccEEEECHHhHhCcHHHHHH
Confidence 799999999999999998754
No 29
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.81 E-value=1.2e-19 Score=186.40 Aligned_cols=201 Identities=17% Similarity=0.212 Sum_probs=154.0
Q ss_pred CCcccccccc--CCC----chHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeecc-CCHHHHHH
Q psy7343 148 SPRFILAPMV--DAS----ELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCG-NDSKNLTE 220 (487)
Q Consensus 148 ~~~~~lApma--~~t----d~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g-~d~~~~~~ 220 (487)
+.|+++|||+ +++ +.+++..+.++|+.++.+.+.+ ..+ +++... ..+.|+.+||++ .|.+...+
T Consensus 80 ~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s-~~l-------e~v~~~-~~~~~~~~QLy~~~d~~~~~~ 150 (368)
T 2nli_A 80 KAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSG-ATF-------EEISEG-LNGGPRWFQIYMAKDDQQNRD 150 (368)
T ss_dssp SSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCS-SCH-------HHHHHH-HTTCCEEEEECCBSSHHHHHH
T ss_pred CCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHh-HHH-------HHHHHh-CCCCCEEEEEeccCCHHHHHH
Confidence 6799999999 766 4678999999999888887765 222 122221 135799999986 78888888
Q ss_pred HHHhhCCc-CcEEEeecCCCcc------------------eeec----cCccccc-----cCChHHHHHHHHHHhhhccC
Q psy7343 221 AAKLAEPH-CDGIDINIGCPQM------------------VAKR----GHYGAYL-----QDDWPLLTNLVSSLRQAVQV 272 (487)
Q Consensus 221 aa~~~~~~-~d~IdiN~GcP~~------------------i~~~----gr~G~~l-----~~d~~~i~eiv~~v~~~~~i 272 (487)
+++++++. +++|+||++||.. +... ...|+.+ ..|++...+.++++++.+++
T Consensus 151 ~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~~ 230 (368)
T 2nli_A 151 ILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSGL 230 (368)
T ss_dssp HHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSSS
T ss_pred HHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcCC
Confidence 99888776 8999999999861 1100 1123332 12566667778899998999
Q ss_pred cEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH
Q psy7343 273 PVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 273 PV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~ 350 (487)
||++|+- ...+.++.++++|+|+|.|++++..+. +.+.+.++.+.++++.+ ++|||++|||++.+|+.++
T Consensus 231 PvivK~v------~~~e~a~~a~~~Gad~I~vs~~ggr~~--~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~ka 302 (368)
T 2nli_A 231 PVFVKGI------QHPEDADMAIKRGASGIWVSNHGARQL--YEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKA 302 (368)
T ss_dssp CEEEEEE------CSHHHHHHHHHTTCSEEEECCGGGTSC--SSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHH
T ss_pred CEEEEcC------CCHHHHHHHHHcCCCEEEEcCCCcCCC--CCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHH
Confidence 9999962 346778899999999999976654443 56788999999999888 7999999999999999999
Q ss_pred HHhcCCcEEEeccccc
Q psy7343 351 LAQTGVAGVMTAEGNL 366 (487)
Q Consensus 351 l~~~Gad~VmiGRa~l 366 (487)
+ ..|||+|||||+++
T Consensus 303 l-alGAd~V~iGr~~l 317 (368)
T 2nli_A 303 L-ASGADVVALGRPVL 317 (368)
T ss_dssp H-HTTCSEEEECHHHH
T ss_pred H-HcCCCEEEECHHHH
Confidence 9 59999999999554
No 30
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.81 E-value=4e-21 Score=194.09 Aligned_cols=205 Identities=20% Similarity=0.329 Sum_probs=147.0
Q ss_pred CCceEEecCCCCCCHHHHHHHHHcCCCeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCcccccccc
Q psy7343 78 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPMV 157 (487)
Q Consensus 78 ~~~~~LAPMag~td~pFR~l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lApma 157 (487)
++++++|||+|+||.+||.+++++|++++||||++++.+.+..+..++.+ .++.+.|+++|+.+. ++..+.....
T Consensus 4 ~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~----~~~~~~~aa~ 78 (318)
T 1vhn_A 4 EVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGS----EPNELSEAAR 78 (318)
T ss_dssp -CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECS----CHHHHHHHHH
T ss_pred CCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCC----CHHHHHHHHH
Confidence 67999999999999999999999999999999999999888777777787 778889999998521 2222221111
Q ss_pred CCCchHHHHHHHHhCCccceecccc----chhhhcChhHHHHHHhc--CCCCCCeeeeec-cCCHHHHHHHHHhhCCc-C
Q psy7343 158 DASELPWRLLSRRYGSHLCYTPMVS----AHQFIADKKLRQEILMS--TPEDRPLIIQFC-GNDSKNLTEAAKLAEPH-C 229 (487)
Q Consensus 158 ~~td~~fr~i~~~~Ga~l~~t~~v~----~~~Ll~~~~~~~~~l~~--~~~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~-~ 229 (487)
.+.+. |+.+..|+| ||.+.+. |..|+++++...++++. ...+.||+||++ |.+.++..+.++.+++. +
T Consensus 79 ~a~~~-~d~Iein~g---cP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~ 154 (318)
T 1vhn_A 79 ILSEK-YKWIDLNAG---CPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGV 154 (318)
T ss_dssp HHTTT-CSEEEEEEC---CCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTC
T ss_pred HHHHh-CCEEEEECC---CCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCC
Confidence 22233 444555667 6665442 67788999888888752 223589999998 55544444778888776 7
Q ss_pred cEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 230 DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 230 d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
|+|.++.+.. .+.+. ...+++.+. .+++ ++||++++ ++.+..++.+.+++.|+|+|++ ||..
T Consensus 155 d~i~v~g~~~-----~~~~~--~~~~~~~i~----~i~~--~ipVi~~G----gI~s~~da~~~l~~~gad~V~i-GR~~ 216 (318)
T 1vhn_A 155 DEVFIHTRTV-----VQSFT--GRAEWKALS----VLEK--RIPTFVSG----DIFTPEDAKRALEESGCDGLLV-ARGA 216 (318)
T ss_dssp CEEEEESSCT-----TTTTS--SCCCGGGGG----GSCC--SSCEEEES----SCCSHHHHHHHHHHHCCSEEEE-SGGG
T ss_pred CEEEEcCCCc-----cccCC--CCcCHHHHH----HHHc--CCeEEEEC----CcCCHHHHHHHHHcCCCCEEEE-CHHH
Confidence 7777775431 11111 123555443 4555 89999998 7888999999999899999999 9854
No 31
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.81 E-value=8e-19 Score=179.42 Aligned_cols=207 Identities=17% Similarity=0.193 Sum_probs=147.0
Q ss_pred CCccccccccCCC-------chHHHHHHHHhCCccceeccccchhhhcChhH--HHHHHhcCCCCCCeeeeec-cCCHHH
Q psy7343 148 SPRFILAPMVDAS-------ELPWRLLSRRYGSHLCYTPMVSAHQFIADKKL--RQEILMSTPEDRPLIIQFC-GNDSKN 217 (487)
Q Consensus 148 ~~~~~lApma~~t-------d~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~--~~~~l~~~~~~~Pv~Vqi~-g~d~~~ 217 (487)
+.|+++|||++++ +.+++..+.++|+.++.+.+.++ +.++.. ..++++....+.|+++|+. +.+++.
T Consensus 55 ~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~ 131 (349)
T 1p0k_A 55 SSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA---LKDPSERLSYEIVRKENPNGLIFANLGSEATAAQ 131 (349)
T ss_dssp SCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT---TTCHHHHHHHHHHHHHCSSSCEEEEEETTCCHHH
T ss_pred CCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc---ccCcccccceehhhhhCCCceeEEeecCCCCHHH
Confidence 5799999999998 67788899999987766665443 344322 2233443455789999998 778877
Q ss_pred HHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEee-cccccccHHHHHHHHHH
Q psy7343 218 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIR-IYQDVNKTVEYARMLER 296 (487)
Q Consensus 218 ~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR-~~~d~~~~~e~a~~le~ 296 (487)
+.++++.+ .+|+|+||++||+...... | ..+.+.+.++++++++.+++||++|+. .+.+ .+.++.+++
T Consensus 132 ~~~~~~~~--gad~i~i~~~~~~~~~~~~--~---~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~----~~~a~~a~~ 200 (349)
T 1p0k_A 132 AKEAVEMI--GANALQIHLNVIQEIVMPE--G---DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS----KASAGKLYE 200 (349)
T ss_dssp HHHHHHHT--TCSEEEEEECTTTTC-------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC----HHHHHHHHH
T ss_pred HHHHHHhc--CCCeEEecccchhhhcCCC--C---CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC----HHHHHHHHH
Confidence 66554432 2899999999987532211 1 111222567888888888999999973 2222 567889999
Q ss_pred cCCcEEEE--Ecccc-------CCC-----CCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 297 AGCQLLAV--HGRTV-------DQR-----GMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 297 ~G~d~I~V--hgRt~-------~~~-----g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+|+|+|.+ ||+|. .+. -...|.+.++.+.++++.+ ++|||++|||+|++|+.+++ ..|||+|++
T Consensus 201 ~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~k~l-~~GAd~V~i 279 (349)
T 1p0k_A 201 AGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAI-ALGASCTGM 279 (349)
T ss_dssp HTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HTTCSEEEE
T ss_pred cCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHH-HcCCCEEEE
Confidence 99999999 66642 110 0245677889999999887 89999999999999999999 589999999
Q ss_pred ccccccCc
Q psy7343 362 AEGNLYNP 369 (487)
Q Consensus 362 GRa~l~~P 369 (487)
||+++...
T Consensus 280 G~~~l~~~ 287 (349)
T 1p0k_A 280 AGHFLKAL 287 (349)
T ss_dssp CHHHHHHH
T ss_pred cHHHHHHH
Confidence 99877653
No 32
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.81 E-value=4.9e-20 Score=188.54 Aligned_cols=150 Identities=19% Similarity=0.174 Sum_probs=129.9
Q ss_pred HHHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhccC-cEEEEeecccc
Q psy7343 215 SKNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQV-PVSCKIRIYQD 283 (487)
Q Consensus 215 ~~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~i-PV~vKiR~~~d 283 (487)
.++|+++|++++++ ||+||||++| |..+.+.+.||+.+.++.+++.|++++|+++++. ||.+|++....
T Consensus 160 i~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~ 239 (361)
T 3gka_A 160 VAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGD 239 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccc
Confidence 36788999988877 9999999999 9899999999999999999999999999999843 99999986321
Q ss_pred ---------cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhc
Q psy7343 284 ---------VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQT 354 (487)
Q Consensus 284 ---------~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~ 354 (487)
.++..++++.+++.|+|.|.+|+++. +. +.++++++.+++|||++|+| |+++++++++..
T Consensus 240 ~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~-------~~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~G 308 (361)
T 3gka_A 240 AHTMGDSDPAATFGHVARELGRRRIAFLFARESFG-------GD---AIGQQLKAAFGGPFIVNENF-TLDSAQAALDAG 308 (361)
T ss_dssp SSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS-------TT---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTT
T ss_pred cCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC-------CH---HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHcC
Confidence 23568899999999999999998751 11 35788899999999999999 999999999777
Q ss_pred CCcEEEeccccccCcccccCC
Q psy7343 355 GVAGVMTAEGNLYNPALFTGQ 375 (487)
Q Consensus 355 Gad~VmiGRa~l~~P~lf~~~ 375 (487)
+||+|++||+++.||+++.+.
T Consensus 309 ~aD~V~iGR~~ladPdl~~k~ 329 (361)
T 3gka_A 309 QADAVAWGKLFIANPDLPRRF 329 (361)
T ss_dssp SCSEEEESHHHHHCTTHHHHH
T ss_pred CccEEEECHHhHhCcHHHHHH
Confidence 799999999999999998743
No 33
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.79 E-value=3.1e-20 Score=189.88 Aligned_cols=208 Identities=18% Similarity=0.254 Sum_probs=140.3
Q ss_pred CCceEEecCCCCCCHHHHHHHHHcCC-CeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCccccccc
Q psy7343 78 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPM 156 (487)
Q Consensus 78 ~~~~~LAPMag~td~pFR~l~~~~Ga-dl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lApm 156 (487)
++++++|||+|+||.+||.+++++|+ +++||||++++.+++++.+ ++...++.+.|+++|+. |..+..++.+
T Consensus 3 ~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~--~~~~~~~~~~p~~vQL~-----g~~p~~~~~a 75 (350)
T 3b0p_A 3 DPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRE--RLLAFRPEEHPIALQLA-----GSDPKSLAEA 75 (350)
T ss_dssp CCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHH--HHHCCCGGGCSEEEEEE-----CSCHHHHHHH
T ss_pred CCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHH--HHhccCCCCCeEEEEeC-----CCCHHHHHHH
Confidence 67899999999999999999999997 9999999999998876653 45556778899999974 2222111111
Q ss_pred cC-CCchHHHHHHHHhCCccceecccc----chhhhcChhHHHHHHhc--CCCCCCeeeeec-cCC----HHHHHHHHHh
Q psy7343 157 VD-ASELPWRLLSRRYGSHLCYTPMVS----AHQFIADKKLRQEILMS--TPEDRPLIIQFC-GND----SKNLTEAAKL 224 (487)
Q Consensus 157 a~-~td~~fr~i~~~~Ga~l~~t~~v~----~~~Ll~~~~~~~~~l~~--~~~~~Pv~Vqi~-g~d----~~~~~~aa~~ 224 (487)
+. +.+.+|+.+..|+| ||.+.+. |..|+++++...++++. ...+.||++|++ |.+ .++..+.++.
T Consensus 76 A~~a~~~G~D~IeIn~g---cP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 76 ARIGEAFGYDEINLNLG---CPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHTTCSEEEEEEC---CCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCc---CCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHH
Confidence 10 01112222333344 5555442 67888999888888752 223689999997 432 2467788888
Q ss_pred hCCc-CcEEEeecCCCcceeeccCcccc----ccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcC
Q psy7343 225 AEPH-CDGIDINIGCPQMVAKRGHYGAY----LQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAG 298 (487)
Q Consensus 225 ~~~~-~d~IdiN~GcP~~i~~~gr~G~~----l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G 298 (487)
++++ +|+|.++.+... . +-.|.. -..+++.+.+ +++.+ ++||++++ ++.+..++.+.++ |
T Consensus 153 l~~aG~d~I~V~~r~~~-~---g~~g~~~~~~~~~~~~~i~~----ik~~~~~iPVianG----gI~s~eda~~~l~--G 218 (350)
T 3b0p_A 153 MAEAGVKVFVVHARSAL-L---ALSTKANREIPPLRHDWVHR----LKGDFPQLTFVTNG----GIRSLEEALFHLK--R 218 (350)
T ss_dssp HHHTTCCEEEEECSCBC--------------CCCCCHHHHHH----HHHHCTTSEEEEES----SCCSHHHHHHHHT--T
T ss_pred HHHcCCCEEEEecCchh-c---ccCcccccCCCcccHHHHHH----HHHhCCCCeEEEEC----CcCCHHHHHHHHh--C
Confidence 8777 777777654311 0 101110 0135655554 56667 89999998 7778888888885 9
Q ss_pred CcEEEEEccccC
Q psy7343 299 CQLLAVHGRTVD 310 (487)
Q Consensus 299 ~d~I~VhgRt~~ 310 (487)
+|+|++ ||...
T Consensus 219 aD~V~i-GRa~l 229 (350)
T 3b0p_A 219 VDGVML-GRAVY 229 (350)
T ss_dssp SSEEEE-CHHHH
T ss_pred CCEEEE-CHHHH
Confidence 999999 98643
No 34
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.78 E-value=1.1e-18 Score=180.54 Aligned_cols=201 Identities=14% Similarity=0.148 Sum_probs=150.9
Q ss_pred CCccccccccCCCchH-------HHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeecc-CCHHHHH
Q psy7343 148 SPRFILAPMVDASELP-------WRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCG-NDSKNLT 219 (487)
Q Consensus 148 ~~~~~lApma~~td~~-------fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g-~d~~~~~ 219 (487)
+.|+++||| ++++.. ++..+.++|+.++.+.+.+. .+ +++... ..+.|+.+|+++ .|.+...
T Consensus 94 ~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~-~l-------e~v~~~-~~~~~~~~QLy~~~d~~~~~ 163 (392)
T 2nzl_A 94 SMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWATS-SI-------EEVAEA-GPEALRWLQLYIYKDREVTK 163 (392)
T ss_dssp SSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSS-CH-------HHHHHH-CTTSEEEEEECCBSSHHHHH
T ss_pred CCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHHH-HH-------HHHHHh-cCCCcEEEEEEecCCHHHHH
Confidence 679999999 666654 88999999988887776641 11 222222 235799999985 7888888
Q ss_pred HHHHhhCCc-CcEEEeecCCCcc----------------ee----e------cc----Cccc---cccC---ChHHHHHH
Q psy7343 220 EAAKLAEPH-CDGIDINIGCPQM----------------VA----K------RG----HYGA---YLQD---DWPLLTNL 262 (487)
Q Consensus 220 ~aa~~~~~~-~d~IdiN~GcP~~----------------i~----~------~g----r~G~---~l~~---d~~~i~ei 262 (487)
++++++++. +++|+||++||.. +. . .. ..|+ .+.. |++...+.
T Consensus 164 ~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~ 243 (392)
T 2nzl_A 164 KLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWED 243 (392)
T ss_dssp HHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHH
Confidence 888888776 8999999999873 10 0 00 0111 1111 66666777
Q ss_pred HHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCC
Q psy7343 263 VSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGN 340 (487)
Q Consensus 263 v~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGg 340 (487)
++++++.+++||++|+- ...+.++.++++|+|+|.|++++..+. +.+++.++.+.++++.+ ++|||++||
T Consensus 244 i~~lr~~~~~PvivKgv------~~~e~A~~a~~aGad~I~vs~~ggr~~--~~g~~~~~~l~~v~~av~~~ipVia~GG 315 (392)
T 2nzl_A 244 IKWLRRLTSLPIVAKGI------LRGDDAREAVKHGLNGILVSNHGARQL--DGVPATIDVLPEIVEAVEGKVEVFLDGG 315 (392)
T ss_dssp HHHHC--CCSCEEEEEE------CCHHHHHHHHHTTCCEEEECCGGGTSS--TTCCCHHHHHHHHHHHHTTSSEEEECSS
T ss_pred HHHHHHhhCCCEEEEec------CCHHHHHHHHHcCCCEEEeCCCCCCcC--CCCcChHHHHHHHHHHcCCCCEEEEECC
Confidence 88899989999999962 236678899999999999977665443 56788899999999887 599999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 341 IQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 341 I~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
|++.+|+.+++ ..|||+|++||+++.
T Consensus 316 I~~g~Dv~kal-alGAd~V~iGr~~l~ 341 (392)
T 2nzl_A 316 VRKGTDVLKAL-ALGAKAVFVGRPIVW 341 (392)
T ss_dssp CCSHHHHHHHH-HTTCSEEEECHHHHH
T ss_pred CCCHHHHHHHH-HhCCCeeEECHHHHH
Confidence 99999999999 589999999996654
No 35
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.78 E-value=5.5e-19 Score=182.19 Aligned_cols=154 Identities=18% Similarity=0.132 Sum_probs=130.7
Q ss_pred CHHHHHHHHHhhC-Cc-CcEEEeecCC---------Ccceee-ccCccc-cccCChHHHHHHHHHHhhhcc-CcEEEEee
Q psy7343 214 DSKNLTEAAKLAE-PH-CDGIDINIGC---------PQMVAK-RGHYGA-YLQDDWPLLTNLVSSLRQAVQ-VPVSCKIR 279 (487)
Q Consensus 214 d~~~~~~aa~~~~-~~-~d~IdiN~Gc---------P~~i~~-~gr~G~-~l~~d~~~i~eiv~~v~~~~~-iPV~vKiR 279 (487)
..++|+++|+++. ++ ||+||||++| |..+.+ .+.||+ .+.++.+++.+++++|+++++ .||.+|++
T Consensus 172 ~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis 251 (379)
T 3aty_A 172 IIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRIS 251 (379)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEEC
Confidence 4578889999887 76 9999999997 777888 899999 899999999999999999985 48999987
Q ss_pred ccc---------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHH
Q psy7343 280 IYQ---------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 280 ~~~---------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~ 350 (487)
... +.++..++++.+++.|+|+|.+|+++.... .+ + .+ ++++++.+++|||++|+| |+++++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~-~~---~-~~-~~~ir~~~~iPvi~~G~i-t~~~a~~~ 324 (379)
T 3aty_A 252 PLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQ-QI---G-DV-VAWVRGSYSGVKISNLRY-DFEEADQQ 324 (379)
T ss_dssp TTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSC-CC---C-CH-HHHHHTTCCSCEEEESSC-CHHHHHHH
T ss_pred cccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCC-Cc---c-HH-HHHHHHHCCCcEEEECCC-CHHHHHHH
Confidence 732 234578899999999999999998763221 11 2 26 899999999999999999 99999999
Q ss_pred HHhcCCcEEEeccccccCcccccC
Q psy7343 351 LAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 351 l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
+++.+||+|++||+++.||+++.+
T Consensus 325 l~~g~aD~V~igR~~l~~P~l~~k 348 (379)
T 3aty_A 325 IREGKVDAVAFGAKFIANPDLVER 348 (379)
T ss_dssp HHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHcCCCeEEEecHHHHhCcHHHHH
Confidence 977679999999999999999864
No 36
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.76 E-value=1.4e-17 Score=171.38 Aligned_cols=200 Identities=22% Similarity=0.250 Sum_probs=149.0
Q ss_pred CCccccccccCCCchH-------HHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeec-cCCHHHHH
Q psy7343 148 SPRFILAPMVDASELP-------WRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC-GNDSKNLT 219 (487)
Q Consensus 148 ~~~~~lApma~~td~~-------fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~-g~d~~~~~ 219 (487)
+.|+++||| +++++. ++..+.++|+.++.+.+.+.+ .+++....+ .|..+|++ +.|++...
T Consensus 71 ~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~--------ieev~~~~~--~~~~~QLy~~~d~~~~~ 139 (370)
T 1gox_A 71 SMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATSS--------VEEVASTGP--GIRFFQLYVYKDRNVVA 139 (370)
T ss_dssp SSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSC--------HHHHHTTCC--CCEEEEECCBSSHHHHH
T ss_pred CCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCCC--------HHHHHhhcC--CCceEEEecCCCchHHH
Confidence 679999999 777776 889999999888877666421 233332222 78999997 78888888
Q ss_pred HHHHhhCCc-CcEEEeecCCCcc----------------e----eec-------cCccccc------cCChHHHHHHHHH
Q psy7343 220 EAAKLAEPH-CDGIDINIGCPQM----------------V----AKR-------GHYGAYL------QDDWPLLTNLVSS 265 (487)
Q Consensus 220 ~aa~~~~~~-~d~IdiN~GcP~~----------------i----~~~-------gr~G~~l------~~d~~~i~eiv~~ 265 (487)
++++.+++. ++.|+||++||.. + ... ...|+.+ ..++....+.+++
T Consensus 140 ~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~ 219 (370)
T 1gox_A 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAW 219 (370)
T ss_dssp HHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHH
T ss_pred HHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHH
Confidence 888888776 8999999999853 0 011 1112221 2244444566788
Q ss_pred HhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCC
Q psy7343 266 LRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQC 343 (487)
Q Consensus 266 v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s 343 (487)
+++.+++||++|+.. ..+.++.+.++|+|+|.|.+....+. ..+.++++.+.++++.+ ++|||++|||++
T Consensus 220 l~~~~~~pv~vK~~~------~~e~a~~a~~~Gad~I~vs~~ggr~~--~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~ 291 (370)
T 1gox_A 220 LQTITSLPILVKGVI------TAEDARLAVQHGAAGIIVSNHGARQL--DYVPATIMALEEVVKAAQGRIPVFLDGGVRR 291 (370)
T ss_dssp HHHHCCSCEEEECCC------SHHHHHHHHHTTCSEEEECCGGGTSS--TTCCCHHHHHHHHHHHTTTSSCEEEESSCCS
T ss_pred HHHHhCCCEEEEecC------CHHHHHHHHHcCCCEEEECCCCCccC--CCcccHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 888889999999742 24667889999999999944322222 44567899999999988 799999999999
Q ss_pred HHHHHHHHHhcCCcEEEecccccc
Q psy7343 344 LADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 344 ~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
.+|+.+++ ..|||+|+|||+++.
T Consensus 292 ~~D~~k~l-~~GAdaV~iGr~~l~ 314 (370)
T 1gox_A 292 GTDVFKAL-ALGAAGVFIGRPVVF 314 (370)
T ss_dssp HHHHHHHH-HHTCSEEEECHHHHH
T ss_pred HHHHHHHH-HcCCCEEeecHHHHH
Confidence 99999999 589999999997764
No 37
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.75 E-value=2e-17 Score=176.55 Aligned_cols=203 Identities=16% Similarity=0.135 Sum_probs=152.1
Q ss_pred CCccccccccC---C----CchHHHHHHHH--hCCccceeccccchhhhcChhHHHHHHhcC-CCCCCeeeeec-cCCHH
Q psy7343 148 SPRFILAPMVD---A----SELPWRLLSRR--YGSHLCYTPMVSAHQFIADKKLRQEILMST-PEDRPLIIQFC-GNDSK 216 (487)
Q Consensus 148 ~~~~~lApma~---~----td~~fr~i~~~--~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~-~~~~Pv~Vqi~-g~d~~ 216 (487)
+.|+++|||++ . .+.+++..+.+ +|+.++.++|.+.+ ..++.... ..+.|..+|++ +.|.+
T Consensus 189 ~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s--------~e~v~~~~~~~~~~~~~QLy~~~d~~ 260 (511)
T 1kbi_A 189 DVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCS--------PEEIIEAAPSDKQIQWYQLYVNSDRK 260 (511)
T ss_dssp SSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSC--------HHHHHHTCCCSSCCEEEEECCCSSHH
T ss_pred CCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCC--------HHHHHhhcCCCCCCeEEEEeecCCHH
Confidence 67999999996 3 36779999999 99888877774331 12222223 23578999998 78899
Q ss_pred HHHHHHHhhCCc-CcEEEeecCCCcce-----eec-----------------cCccc--ccc---CChHHHHHHHHHHhh
Q psy7343 217 NLTEAAKLAEPH-CDGIDINIGCPQMV-----AKR-----------------GHYGA--YLQ---DDWPLLTNLVSSLRQ 268 (487)
Q Consensus 217 ~~~~aa~~~~~~-~d~IdiN~GcP~~i-----~~~-----------------gr~G~--~l~---~d~~~i~eiv~~v~~ 268 (487)
...+++++++++ +++|.|+++||+.- .++ +++++ .++ .|+++..+.++++++
T Consensus 261 ~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~ 340 (511)
T 1kbi_A 261 ITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKK 340 (511)
T ss_dssp HHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHH
Confidence 888999988877 89999999998610 111 11111 111 356666677888999
Q ss_pred hccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-------CCcEEEcCCC
Q psy7343 269 AVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-------TIPVIANGNI 341 (487)
Q Consensus 269 ~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-------~iPVi~nGgI 341 (487)
.+++||++|+- .+ .+.++.++++|+|+|.|++++..+. ..+.+.++.+.++++.+ ++|||++|||
T Consensus 341 ~~~~PvivKgv-----~~-~e~A~~a~~aGad~I~vs~hgG~~~--d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI 412 (511)
T 1kbi_A 341 KTKLPIVIKGV-----QR-TEDVIKAAEIGVSGVVLSNHGGRQL--DFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGV 412 (511)
T ss_dssp HCSSCEEEEEE-----CS-HHHHHHHHHTTCSEEEECCTTTTSS--TTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSC
T ss_pred HhCCcEEEEeC-----CC-HHHHHHHHHcCCCEEEEcCCCCccC--CCCCchHHHHHHHHHHHHhhccCCCcEEEEECCC
Confidence 89999999951 12 5668899999999999965444343 44567789999988876 7999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 342 QCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 342 ~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
++.+|+.+++ ..|||+|||||+++.
T Consensus 413 ~~g~Dv~kaL-alGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 413 RRGTDVLKAL-CLGAKGVGLGRPFLY 437 (511)
T ss_dssp CSHHHHHHHH-HHTCSEEEECHHHHH
T ss_pred CCHHHHHHHH-HcCCCEEEECHHHHH
Confidence 9999999999 589999999996653
No 38
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.74 E-value=6.2e-17 Score=165.72 Aligned_cols=191 Identities=18% Similarity=0.229 Sum_probs=137.0
Q ss_pred CCCCCeeeeeccCCHHHHHHHHHhhCC----cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEE
Q psy7343 201 PEDRPLIIQFCGNDSKNLTEAAKLAEP----HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSC 276 (487)
Q Consensus 201 ~~~~Pv~Vqi~g~d~~~~~~aa~~~~~----~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~v 276 (487)
..+.|+++++.+.+++++.+.++.+++ .+|.|+||++||+. . .+..+..+++.+.++++++++.++.|+.+
T Consensus 124 ~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~---~--g~~~l~~~~~~~~~i~~~v~~~~~~pv~v 198 (354)
T 3tjx_A 124 YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNV---P--GKPQVAYDFDAMRQCLTAVSEVYPHSFGV 198 (354)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHHHHHCCSCEEE
T ss_pred cCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCC---c--chhhhccCHHHHHHHHHHHHHHhhccccc
Confidence 346899999999998888887776544 37899999999964 1 24566778999999999999999999999
Q ss_pred EeecccccccHHHHHHHHHHcC-CcEEEE----------Eccc-------cCCCCCCCCCCCHHH----HHHHHhhC-CC
Q psy7343 277 KIRIYQDVNKTVEYARMLERAG-CQLLAV----------HGRT-------VDQRGMNTGLASWEH----ITAVRKAL-TI 333 (487)
Q Consensus 277 KiR~~~d~~~~~e~a~~le~~G-~d~I~V----------hgRt-------~~~~g~~~g~~~~~~----i~~i~~~~-~i 333 (487)
|++.+.+.......+..+.+.+ ++.+.. ..++ ..+.++++|++.++. +.++++.+ ++
T Consensus 199 K~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~ 278 (354)
T 3tjx_A 199 KMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGK 278 (354)
T ss_dssp EECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTS
T ss_pred ccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCC
Confidence 9988776655666666666554 343332 1122 123456888888754 45555554 79
Q ss_pred cEEEcCCCCCHHHHHHHHHhcCCcEEEeccccc-cCcccccCCCCCcHHHHHHHHHHHHHcC-hhHHHHHHHH
Q psy7343 334 PVIANGNIQCLADVEACLAQTGVAGVMTAEGNL-YNPALFTGQTRPAWELASEYLDLVAQYP-VRLQYARGHV 404 (487)
Q Consensus 334 PVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l-~~P~lf~~~~~~~~~~~~~~l~~~~~~~-~~~~~~r~~l 404 (487)
|||++|||.|.+|+.+++ ..|||+||||||++ .+|++|. ++.++..+++++.+ ..+.++++.+
T Consensus 279 pIIg~GGI~s~~Da~e~i-~aGAs~Vqv~Ta~~y~GP~~~~-------~I~~~L~~~L~~~G~~si~e~~G~~ 343 (354)
T 3tjx_A 279 LIFGCGGVYTGEDAFLHV-LAGASMVQVGTALQEEGPSIFE-------RLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp EEEEESSCCSHHHHHHHH-HHTEEEEEECHHHHHHCTTHHH-------HHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred cEEEeCCcCCHHHHHHHH-HcCCCEEEEChhhhhcCchHHH-------HHHHHHHHHHHHcCCCCHHHHhChh
Confidence 999999999999999999 69999999999975 6799987 45566666776654 3455555543
No 39
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.71 E-value=5.3e-17 Score=164.80 Aligned_cols=205 Identities=19% Similarity=0.216 Sum_probs=142.1
Q ss_pred CCccccccccCCCch------HHHHHHHHhCCccceeccccchhhhcChh--HHHHHHhcCCCCCCee-----eeeccCC
Q psy7343 148 SPRFILAPMVDASEL------PWRLLSRRYGSHLCYTPMVSAHQFIADKK--LRQEILMSTPEDRPLI-----IQFCGND 214 (487)
Q Consensus 148 ~~~~~lApma~~td~------~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~--~~~~~l~~~~~~~Pv~-----Vqi~g~d 214 (487)
+.|+++|||++.++. +++..+.++|+.++.+++.+. +.++. ...+ ++....+.|+. +|+++.+
T Consensus 58 ~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~---le~~~~~~~~q-l~~~~~d~pv~~~~~~~q~~~~~ 133 (332)
T 1vcf_A 58 KAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRIL---LERPEALRSFR-VRKVAPKALLIANLGLAQLRRYG 133 (332)
T ss_dssp SSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHH---HHCTTTHHHHC-CTTTCSSSCEEEEEEGGGGGTCC
T ss_pred CCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhc---ccCCCccceEE-eeccCCCceeecccChhhhhccC
Confidence 579999999988754 778999999988888877664 33321 1212 23334478886 6667778
Q ss_pred HHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHH
Q psy7343 215 SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARML 294 (487)
Q Consensus 215 ~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~l 294 (487)
++.+.++++.+. ++++++|..+.......+ ..+++.+.++++++++ +++||++|+ ++++ ...+.++.+
T Consensus 134 ~~~~~~a~~~~~--~~a~~i~~n~~~~~~~~~------~~~~~~~~~~i~~vr~-~~~Pv~vK~-v~~g--~~~e~a~~~ 201 (332)
T 1vcf_A 134 RDDLLRLVEMLE--ADALAFHVNPLQEAVQRG------DTDFRGLVERLAELLP-LPFPVMVKE-VGHG--LSREAALAL 201 (332)
T ss_dssp HHHHHHHHHHHT--CSEEEEECCHHHHHHTTS------CCCCTTHHHHHHHHCS-CSSCEEEEC-SSSC--CCHHHHHHH
T ss_pred hHHHHHHHhhcC--CCceeeccchHHHHhcCC------CccHHHHHHHHHHHHc-CCCCEEEEe-cCCC--CCHHHHHHH
Confidence 888888877664 355544443312111111 1233446778889999 899999994 2222 345567899
Q ss_pred HHcCCcEEEE--Eccc--------cCC----CC--CCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 295 ERAGCQLLAV--HGRT--------VDQ----RG--MNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 295 e~~G~d~I~V--hgRt--------~~~----~g--~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
+++|+|+|.| ||+| +.+ .+ ...|.+.++.+.++++.+ ++|||++|||+|++|+.+++ ..|||
T Consensus 202 ~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal-~~GAd 280 (332)
T 1vcf_A 202 RDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGAKAL-ALGAD 280 (332)
T ss_dssp TTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHHHHH-HHTCS
T ss_pred HHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHHHHH-HhCCC
Confidence 9999999999 5554 211 00 245667889999999998 89999999999999999999 57999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
+|++||+++..+
T Consensus 281 ~V~igr~~l~~~ 292 (332)
T 1vcf_A 281 LLAVARPLLRPA 292 (332)
T ss_dssp EEEECGGGHHHH
T ss_pred hHhhhHHHHHHH
Confidence 999999888654
No 40
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.70 E-value=1.1e-16 Score=162.58 Aligned_cols=187 Identities=16% Similarity=0.171 Sum_probs=140.0
Q ss_pred CCccccccccCCCchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhC
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAE 226 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~ 226 (487)
+.|++++||.++++..+...+.+.|+ +++.+++++...+...-+...+. .+.|+.|+++..+++ +.+.++.+.
T Consensus 12 ~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~-----~~~p~gvnl~~~~~~-~~~~~~~a~ 85 (332)
T 2z6i_A 12 DYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSL-----TDKPFGVNIMLLSPF-VEDIVDLVI 85 (332)
T ss_dssp SSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHH-----CCSCEEEEECTTSTT-HHHHHHHHH
T ss_pred CCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-----cCCCEEEEecCCCCC-HHHHHHHHH
Confidence 56899999999999988887888775 77777766544432221112111 257999999875443 455555554
Q ss_pred Cc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEE
Q psy7343 227 PH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVH 305 (487)
Q Consensus 227 ~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~Vh 305 (487)
+. +|+|++|.|+|. ++++.+++ .++||++++ +..+.++.+++.|+|+|.++
T Consensus 86 ~~g~d~V~~~~g~p~--------------------~~i~~l~~-~g~~v~~~v-------~~~~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 86 EEGVKVVTTGAGNPS--------------------KYMERFHE-AGIIVIPVV-------PSVALAKRMEKIGADAVIAE 137 (332)
T ss_dssp HTTCSEEEECSSCGG--------------------GTHHHHHH-TTCEEEEEE-------SSHHHHHHHHHTTCSCEEEE
T ss_pred HCCCCEEEECCCChH--------------------HHHHHHHH-cCCeEEEEe-------CCHHHHHHHHHcCCCEEEEE
Confidence 44 899999999862 13344554 388999887 34566788999999999998
Q ss_pred ccccCCCCCCCC-CCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccc
Q psy7343 306 GRTVDQRGMNTG-LASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372 (487)
Q Consensus 306 gRt~~~~g~~~g-~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf 372 (487)
|+.. ++..| ..+|+.++++++.+++||+++|||.+++++.+++ ..|||+|++||+++.+|...
T Consensus 138 g~~~---GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al-~~GAdgV~vGs~~l~~~e~~ 201 (332)
T 2z6i_A 138 GMEA---GGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGF-MLGAEAVQVGTRFVVAKESN 201 (332)
T ss_dssp CTTS---SEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHTBTTCC
T ss_pred CCCC---CCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEecHHHhcCcccc
Confidence 8732 22333 5678999999999999999999999999999999 58999999999999999653
No 41
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.69 E-value=5.7e-17 Score=166.12 Aligned_cols=156 Identities=16% Similarity=0.201 Sum_probs=122.0
Q ss_pred HHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhcc-CcEEEEeeccc--
Q psy7343 216 KNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VPVSCKIRIYQ-- 282 (487)
Q Consensus 216 ~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iPV~vKiR~~~-- 282 (487)
++|+++|++++++ ||+||||+++ |..|.+++.||+.+.++.+++.|++++|+++++ -+|.+++....
T Consensus 152 ~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~ 231 (358)
T 4a3u_A 152 DDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEI 231 (358)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCccc
Confidence 6789999999887 9999999985 888999999999999999999999999999884 35665553321
Q ss_pred ----cc---ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcC
Q psy7343 283 ----DV---NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTG 355 (487)
Q Consensus 283 ----d~---~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~G 355 (487)
+. .....+++.+++.|++.+.++..+.... +......+..+++|+....||++ |++.+++.+++++++..
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~a~~ik~~~~~~v~~-~g~~~~~~ae~~l~~G~ 308 (358)
T 4a3u_A 232 QGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGT--FGKTDQPKLSPEIRKVFKPPLVL-NQDYTFETAQAALDSGV 308 (358)
T ss_dssp TTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCS--SSBCSSCCCHHHHHHHCCSCEEE-ESSCCHHHHHHHHHHTS
T ss_pred CCCcccchHHHHHHHHHhhhccCccccccccccccCc--ccccccHHHHHHHHHhcCCcEEE-eCCCCHHHHHHHHHcCC
Confidence 11 2345667888899999999965543322 21222234567788888888886 66889999999997667
Q ss_pred CcEEEeccccccCcccccC
Q psy7343 356 VAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 356 ad~VmiGRa~l~~P~lf~~ 374 (487)
||.|.+||++++||+|.++
T Consensus 309 aD~V~~gR~~ladPdlp~k 327 (358)
T 4a3u_A 309 ADAISFGRPFIGNPDLPRR 327 (358)
T ss_dssp CSEEEESHHHHHCTTHHHH
T ss_pred ceEeHhhHHHHhChhHHHH
Confidence 9999999999999999764
No 42
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.65 E-value=6.6e-16 Score=158.35 Aligned_cols=206 Identities=16% Similarity=0.211 Sum_probs=141.4
Q ss_pred CCccccccccCCCchHH------HHHHHHhCCccceeccccchhhhcChhHHH--HHHhcCCCCCCeee-----eecc-C
Q psy7343 148 SPRFILAPMVDASELPW------RLLSRRYGSHLCYTPMVSAHQFIADKKLRQ--EILMSTPEDRPLII-----QFCG-N 213 (487)
Q Consensus 148 ~~~~~lApma~~td~~f------r~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~--~~l~~~~~~~Pv~V-----qi~g-~ 213 (487)
+.|++++||.|.++.++ +.+++++|+.+...+|..+ ++++.... +.++....+.|+.. |+.+ +
T Consensus 59 ~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~---l~~~~~~~s~~~vr~~ap~~~~~anlg~~ql~~~~ 135 (368)
T 3vkj_A 59 SVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVA---IEKAEARESFAIVRKVAPTIPIIANLGMPQLVKGY 135 (368)
T ss_dssp SSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHH---HHCGGGSHHHHHHHHHCSSSCEEEEEEGGGGGTTC
T ss_pred cCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhc---cCCHHHHhhHHHHHHhCcCcceecCcCeeecCCCC
Confidence 67999999999998774 7899999987766555433 33444322 22443344567754 5554 7
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChH-HHHHHHHHHhhhccCcEEEEeecccccccHHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP-LLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYAR 292 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~-~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~ 292 (487)
+++...++++.++..+..|+||... ...... | ..++. ...+.++.+++.+++||++|+ +|++. ..+.++
T Consensus 136 ~~~~~~~av~~~~a~al~Ihln~~~---~~~~p~-g---~~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g~--s~~~A~ 205 (368)
T 3vkj_A 136 GLKEFQDAIQMIEADAIAVHLNPAQ---EVFQPE-G---EPEYQIYALEKLRDISKELSVPIIVKE-SGNGI--SMETAK 205 (368)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCHHH---HHHSSS-C---CCBCBTHHHHHHHHHHTTCSSCEEEEC-SSSCC--CHHHHH
T ss_pred CHHHHHHHHHHhcCCCeEEEecchh---hhhCCC-C---CchhhHHHHHHHHHHHHHcCCCEEEEe-CCCCC--CHHHHH
Confidence 8888889888885445667777332 111111 1 12333 356778889999999999996 44433 357789
Q ss_pred HHHHcCCcEEEEEccccC---------CC---------C---CCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHH
Q psy7343 293 MLERAGCQLLAVHGRTVD---------QR---------G---MNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 293 ~le~~G~d~I~VhgRt~~---------~~---------g---~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~ 350 (487)
.++++|+|+|.|+|++.. +. + ..-|.+....+.++++.+ ++|||++|||+|+.|+.++
T Consensus 206 ~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~~~d~~ka 285 (368)
T 3vkj_A 206 LLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKA 285 (368)
T ss_dssp HHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCSHHHHHHH
T ss_pred HHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHH
Confidence 999999999999554221 00 0 000334446788888888 5999999999999999999
Q ss_pred HHhcCCcEEEecccccc
Q psy7343 351 LAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 351 l~~~Gad~VmiGRa~l~ 367 (487)
+ ..|||+||+||+++.
T Consensus 286 l-~lGA~~v~ig~~~l~ 301 (368)
T 3vkj_A 286 I-ALGADIAGMALPVLK 301 (368)
T ss_dssp H-HHTCSEEEECHHHHH
T ss_pred H-HcCCCEEEEcHHHHH
Confidence 9 589999999997664
No 43
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.61 E-value=1.1e-14 Score=151.24 Aligned_cols=160 Identities=19% Similarity=0.220 Sum_probs=113.4
Q ss_pred HHHHHHHHhhCCc-CcEEEeecCC---------CcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeeccc--
Q psy7343 216 KNLTEAAKLAEPH-CDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQ-- 282 (487)
Q Consensus 216 ~~~~~aa~~~~~~-~d~IdiN~Gc---------P~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~-- 282 (487)
++|+++|++++++ ||+||||+++ |..|.+.+.||+.+.++.+++.||+++||+++ +-||.+++....
T Consensus 172 ~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~ 251 (400)
T 4gbu_A 172 KEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVF 251 (400)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCT
T ss_pred HHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 6789999999887 9999999986 88899999999999999999999999999988 347777664311
Q ss_pred ----c------cccHHHHHHHHHHcC-----CcEEEEEccccCCCCCCCCCCCH--HHHHHHHhhCCCcEEEcCCCCCHH
Q psy7343 283 ----D------VNKTVEYARMLERAG-----CQLLAVHGRTVDQRGMNTGLASW--EHITAVRKALTIPVIANGNIQCLA 345 (487)
Q Consensus 283 ----d------~~~~~e~a~~le~~G-----~d~I~VhgRt~~~~g~~~g~~~~--~~i~~i~~~~~iPVi~nGgI~s~~ 345 (487)
+ ..+..++++.++..+ .+.+.+............+...+ ...+.+++.+++|||++|+|.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~~~~~~ 331 (400)
T 4gbu_A 252 NSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGNFALHP 331 (400)
T ss_dssp TTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHCCSCEEEESSCTTCH
T ss_pred CCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHhCCCEEEeCCCCChH
Confidence 0 112344455555433 44555532211110000111111 223446778899999999999877
Q ss_pred HHHHHHHhcCCcEEEeccccccCcccccCC
Q psy7343 346 DVEACLAQTGVAGVMTAEGNLYNPALFTGQ 375 (487)
Q Consensus 346 da~~~l~~~Gad~VmiGRa~l~~P~lf~~~ 375 (487)
++.+.+.+.+||.|.+||++++||+|.++.
T Consensus 332 ~~~~~~~~~~aDlV~~gR~~iadPdl~~k~ 361 (400)
T 4gbu_A 332 EVVREEVKDKRTLIGYGRFFISNPDLVDRL 361 (400)
T ss_dssp HHHHHHTTSTTEEEECCHHHHHCTTHHHHH
T ss_pred HHHHHHHcCCCeEhHHHHHHHHCcHHHHHH
Confidence 777666577899999999999999997643
No 44
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.60 E-value=1.8e-14 Score=146.42 Aligned_cols=188 Identities=20% Similarity=0.164 Sum_probs=135.5
Q ss_pred CCccccccccCCCchHHHH-HHHHhCCccceeccccchhhhcChhHHHHHHhc-CCCCCCeeeeeccCCHHHHHHHHHhh
Q psy7343 148 SPRFILAPMVDASELPWRL-LSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS-TPEDRPLIIQFCGNDSKNLTEAAKLA 225 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~-i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~-~~~~~Pv~Vqi~g~d~~~~~~aa~~~ 225 (487)
+.|++++||+++++..+.. ++...|.+++.+++.. ...+.++. ...+.|+++++ +.+++.+..+....
T Consensus 46 ~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~---------~~~~~i~~~~~~g~~v~v~~-g~~~~~~~~a~~~~ 115 (336)
T 1ypf_A 46 KLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPE---------KRISFIRDMQSRGLIASISV-GVKEDEYEFVQQLA 115 (336)
T ss_dssp SSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGG---------GHHHHHHHHHHTTCCCEEEE-CCSHHHHHHHHHHH
T ss_pred cCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCH---------HHHHHHHHHHhcCCeEEEeC-CCCHHHHHHHHHHH
Confidence 6799999999999988854 5666676776654432 22333331 12356899996 55666665554455
Q ss_pred CCc--CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEE
Q psy7343 226 EPH--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLA 303 (487)
Q Consensus 226 ~~~--~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~ 303 (487)
+.. ++.|++|++. | ++....++++++++.++.|+++++ .+. ..+.++.++++|+|+|.
T Consensus 116 ~~g~~~~~i~i~~~~----------G-----~~~~~~~~i~~lr~~~~~~~vi~G----~v~-s~e~A~~a~~aGad~Iv 175 (336)
T 1ypf_A 116 AEHLTPEYITIDIAH----------G-----HSNAVINMIQHIKKHLPESFVIAG----NVG-TPEAVRELENAGADATK 175 (336)
T ss_dssp HTTCCCSEEEEECSS----------C-----CSHHHHHHHHHHHHHCTTSEEEEE----EEC-SHHHHHHHHHHTCSEEE
T ss_pred hcCCCCCEEEEECCC----------C-----CcHHHHHHHHHHHHhCCCCEEEEC----CcC-CHHHHHHHHHcCCCEEE
Confidence 554 7889988642 1 566777888889988865555564 333 35778899999999999
Q ss_pred E--Ecccc----CCCCCCCCCC--CHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 304 V--HGRTV----DQRGMNTGLA--SWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 304 V--hgRt~----~~~g~~~g~~--~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
+ ||++. ... ..+.+ .++.+.++++.+++|||++|||++..|+.+++ ..|||+||+||+++.-
T Consensus 176 vs~hgG~~~~~~~~~--~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kal-alGAdaV~iGr~~l~t 245 (336)
T 1ypf_A 176 VGIGPGKVCITKIKT--GFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSI-RFGATMVMIGSLFAGH 245 (336)
T ss_dssp ECSSCSTTCHHHHHH--SCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHH-HTTCSEEEESGGGTTC
T ss_pred EecCCCceeeccccc--CcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHH-HcCCCEEEeChhhhcc
Confidence 9 54321 111 12333 57899999999999999999999999999999 6899999999999964
No 45
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.60 E-value=9.4e-15 Score=150.78 Aligned_cols=200 Identities=15% Similarity=0.109 Sum_probs=140.4
Q ss_pred CCccccccccC--C----CchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHH
Q psy7343 148 SPRFILAPMVD--A----SELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEA 221 (487)
Q Consensus 148 ~~~~~lApma~--~----td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~a 221 (487)
+.|++++||++ . ++.++++.+.++|+.++.+. ++...+ +++... .+.|.++|+.....+...+.
T Consensus 72 ~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss-~s~~~l-------e~i~~~--~~~~~~fQly~~~~~~~~~~ 141 (380)
T 1p4c_A 72 SMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLST-ASNMSI-------EDLARQ--CDGDLWFQLYVIHREIAQGM 141 (380)
T ss_dssp SSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECT-TCSSCH-------HHHHHH--CCSCEEEEECCSSHHHHHHH
T ss_pred CCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCc-cccCCH-------HHHHhc--cCCCeEEEEEechHHHHHHH
Confidence 67999999965 4 57778999999998776653 222221 112211 25789999974335555556
Q ss_pred HHhhCCc-CcEEE--------------eecCCCcc--ee-----------eccCccccc---cC---ChHHHHHHHHHHh
Q psy7343 222 AKLAEPH-CDGID--------------INIGCPQM--VA-----------KRGHYGAYL---QD---DWPLLTNLVSSLR 267 (487)
Q Consensus 222 a~~~~~~-~d~Id--------------iN~GcP~~--i~-----------~~gr~G~~l---~~---d~~~i~eiv~~v~ 267 (487)
.+.++++ +..+. +|.||+.. +. .....+..+ .. |++...+++++++
T Consensus 142 i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~ 221 (380)
T 1p4c_A 142 VLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLR 221 (380)
T ss_dssp HHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHH
Confidence 6655554 55543 46677321 10 000111111 11 5666678888899
Q ss_pred hhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEE--EccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHH
Q psy7343 268 QAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAV--HGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLA 345 (487)
Q Consensus 268 ~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~V--hgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~ 345 (487)
+.+++||++|+ + ...+.++.+.++|+|+|.| ||++ +. ..+.++++.+.++++.+++|||++|||++.+
T Consensus 222 ~~~~~Pv~vkg-----v-~t~e~a~~a~~aGad~I~vs~~gg~--~~--d~~~~~~~~l~~v~~~~~~pVia~GGI~~~~ 291 (380)
T 1p4c_A 222 DLWPHKLLVKG-----L-LSAEDADRCIAEGADGVILSNHGGR--QL--DCAISPMEVLAQSVAKTGKPVLIDSGFRRGS 291 (380)
T ss_dssp HHCCSEEEEEE-----E-CCHHHHHHHHHTTCSEEEECCGGGT--SC--TTCCCGGGTHHHHHHHHCSCEEECSSCCSHH
T ss_pred HhcCCCEEEEe-----c-CcHHHHHHHHHcCCCEEEEcCCCCC--cC--CCCcCHHHHHHHHHHHcCCeEEEECCCCCHH
Confidence 99999999996 2 3466788999999999999 5443 32 3466789999999999999999999999999
Q ss_pred HHHHHHHhcCCcEEEeccccccC
Q psy7343 346 DVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 346 da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
|+.+++ ..|||+|++||+++..
T Consensus 292 dv~kal-~~GAdaV~iGr~~l~~ 313 (380)
T 1p4c_A 292 DIVKAL-ALGAEAVLLGRATLYG 313 (380)
T ss_dssp HHHHHH-HTTCSCEEESHHHHHH
T ss_pred HHHHHH-HhCCcHhhehHHHHHH
Confidence 999999 5899999999998753
No 46
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.59 E-value=2.1e-14 Score=145.29 Aligned_cols=187 Identities=14% Similarity=0.098 Sum_probs=131.5
Q ss_pred CCccccccccCCCchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHh--cCCCCCCeeeeeccC----CHHHHHH
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILM--STPEDRPLIIQFCGN----DSKNLTE 220 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~--~~~~~~Pv~Vqi~g~----d~~~~~~ 220 (487)
+.|++++||+++++..+...+.+.|+ +++.+++.. +++...+.++ ....+.|+.|+++.+ ++ .+.+
T Consensus 15 ~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~------s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~-~~~~ 87 (328)
T 2gjl_A 15 EHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQP------SPEALAAEIARCRELTDRPFGVNLTLLPTQKPV-PYAE 87 (328)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSS------SHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCC-CHHH
T ss_pred CCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCC------CHHHHHHHHHHHHHhcCCCeEEEEeccccccCc-cHHH
Confidence 56889999999999998888777774 555444322 1222222221 111257899998865 22 2444
Q ss_pred HHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCC
Q psy7343 221 AAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGC 299 (487)
Q Consensus 221 aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~ 299 (487)
.++.+.+. .|.|.+|+|+| + ++++.+++. +++++.++ ...+.++.+++.|+
T Consensus 88 ~~~~~~~~g~d~V~~~~g~p----------------~----~~~~~l~~~-gi~vi~~v-------~t~~~a~~~~~~Ga 139 (328)
T 2gjl_A 88 YRAAIIEAGIRVVETAGNDP----------------G----EHIAEFRRH-GVKVIHKC-------TAVRHALKAERLGV 139 (328)
T ss_dssp HHHHHHHTTCCEEEEEESCC----------------H----HHHHHHHHT-TCEEEEEE-------SSHHHHHHHHHTTC
T ss_pred HHHHHHhcCCCEEEEcCCCc----------------H----HHHHHHHHc-CCCEEeeC-------CCHHHHHHHHHcCC
Confidence 45544444 88888887775 1 233445544 78888775 33456677889999
Q ss_pred cEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 300 QLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 300 d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
|+|.++|++.....+.....+|+.++++++.+++||+++|||.+++++.+++ ..|||+|++||+++..+.
T Consensus 140 D~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al-~~GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 140 DAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAAL-ALGADAINMGTRFLATRE 209 (328)
T ss_dssp SEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHTSSS
T ss_pred CEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHcCcc
Confidence 9999988754211011123688999999999999999999999999999999 589999999999999987
No 47
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.57 E-value=3e-14 Score=144.14 Aligned_cols=184 Identities=16% Similarity=0.208 Sum_probs=133.6
Q ss_pred CCccccccccCCCchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHh--cCCCCCCeeeeeccCCHHHHHHHHHh
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILM--STPEDRPLIIQFCGNDSKNLTEAAKL 224 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~--~~~~~~Pv~Vqi~g~d~~~~~~aa~~ 224 (487)
+.|++++||+++++..+...+.+.|+ ++..+.+++. +...+.++ ....+.|+.|++...+++ +.+.++.
T Consensus 26 ~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~-------~~l~~~i~~i~~~~~~p~gVnl~~~~~~-~~~~~~~ 97 (326)
T 3bo9_A 26 EHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKP-------DDLRKAISELRQKTDKPFGVNIILVSPW-ADDLVKV 97 (326)
T ss_dssp SSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCH-------HHHHHHHHHHHTTCSSCEEEEEETTSTT-HHHHHHH
T ss_pred CCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCH-------HHHHHHHHHHHHhcCCCEEEEEeccCCC-HHHHHHH
Confidence 67999999999999999888888774 5555444433 22333332 122357999998864442 2334444
Q ss_pred hCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEE
Q psy7343 225 AEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLA 303 (487)
Q Consensus 225 ~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~ 303 (487)
+.+ ..|.|.+|.|+|. ++++.+++ .+++|+.++ ...+.++.+++.|+|+|.
T Consensus 98 ~~~~g~d~V~l~~g~p~--------------------~~~~~l~~-~g~~v~~~v-------~s~~~a~~a~~~GaD~i~ 149 (326)
T 3bo9_A 98 CIEEKVPVVTFGAGNPT--------------------KYIRELKE-NGTKVIPVV-------ASDSLARMVERAGADAVI 149 (326)
T ss_dssp HHHTTCSEEEEESSCCH--------------------HHHHHHHH-TTCEEEEEE-------SSHHHHHHHHHTTCSCEE
T ss_pred HHHCCCCEEEECCCCcH--------------------HHHHHHHH-cCCcEEEEc-------CCHHHHHHHHHcCCCEEE
Confidence 333 4888999888762 12333443 378888876 345667788899999999
Q ss_pred EEccccCCCCCCCC-CCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 304 VHGRTVDQRGMNTG-LASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 304 VhgRt~~~~g~~~g-~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++|+... +..| ..+|+.+.++++.+++||+++|||.+.+|+.+++ ..|||+|++|++++..+..
T Consensus 150 v~g~~~G---G~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al-~~GA~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 150 AEGMESG---GHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAF-ALGAEAVQMGTRFVASVES 214 (326)
T ss_dssp EECTTSS---EECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHTBSSC
T ss_pred EECCCCC---ccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHH-HhCCCEEEechHHHcCccc
Confidence 9987432 2323 4688999999999999999999999999999999 5899999999999998865
No 48
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.57 E-value=4.3e-14 Score=145.40 Aligned_cols=192 Identities=19% Similarity=0.226 Sum_probs=131.6
Q ss_pred CCccccccccC-CCchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCH-----HH---
Q psy7343 148 SPRFILAPMVD-ASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDS-----KN--- 217 (487)
Q Consensus 148 ~~~~~lApma~-~td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~-----~~--- 217 (487)
+.|++++||++ +++..+...+.+.|+ ++..+.+++...+.....+..+.+ +.|+.|+++...+ +.
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~-----~~p~gVnl~~~~~~~~~~~~~~~ 84 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLT-----GRPFGVNVFMPQPELAESGAVEV 84 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHC-----CSCEEEEEECCCCCC---CHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhC-----CCCeEEEEecCCCCcccHHHHHH
Confidence 56899999995 899999888888775 666666666555433332332222 3689999874322 11
Q ss_pred --------------------------HHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc
Q psy7343 218 --------------------------LTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV 270 (487)
Q Consensus 218 --------------------------~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~ 270 (487)
+.+.++.+.+. .+.|.+|+|+|. ++ +++.+++ .
T Consensus 85 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~---------------~~----~i~~~~~-~ 144 (369)
T 3bw2_A 85 YAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPD---------------RE----VIARLRR-A 144 (369)
T ss_dssp HHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCC---------------HH----HHHHHHH-T
T ss_pred HHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCc---------------HH----HHHHHHH-C
Confidence 22333333333 677777777642 22 3334444 3
Q ss_pred cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCC-CCCC------C--CCCHHHHHHHHhhCCCcEEEcCCC
Q psy7343 271 QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQR-GMNT------G--LASWEHITAVRKALTIPVIANGNI 341 (487)
Q Consensus 271 ~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~-g~~~------g--~~~~~~i~~i~~~~~iPVi~nGgI 341 (487)
+++|++++ ...+.++.+++.|+|+|.++|+..... +... + ...|+.++++++.+++||+++|||
T Consensus 145 g~~v~~~v-------~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI 217 (369)
T 3bw2_A 145 GTLTLVTA-------TTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGI 217 (369)
T ss_dssp TCEEEEEE-------SSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSC
T ss_pred CCeEEEEC-------CCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCC
Confidence 78888875 234457788899999999987643110 0000 1 224899999999999999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEeccccccCcccc
Q psy7343 342 QCLADVEACLAQTGVAGVMTAEGNLYNPALF 372 (487)
Q Consensus 342 ~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf 372 (487)
.+++++.+++ ..|||+|++||+++.+|+..
T Consensus 218 ~~~~~~~~~l-~~GAd~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 218 MRGGQIAAVL-AAGADAAQLGTAFLATDESG 247 (369)
T ss_dssp CSHHHHHHHH-HTTCSEEEESHHHHTSTTCC
T ss_pred CCHHHHHHHH-HcCCCEEEEChHHhCCcccC
Confidence 9999999999 58999999999999999874
No 49
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.56 E-value=4.2e-14 Score=144.52 Aligned_cols=205 Identities=13% Similarity=0.109 Sum_probs=121.8
Q ss_pred CCccccccccCCCchH------HHHHHHHhCCccceeccccchhhhcChhHHH-HHHhcCCCCCCeeeeeccC-CHHHHH
Q psy7343 148 SPRFILAPMVDASELP------WRLLSRRYGSHLCYTPMVSAHQFIADKKLRQ-EILMSTPEDRPLIIQFCGN-DSKNLT 219 (487)
Q Consensus 148 ~~~~~lApma~~td~~------fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~-~~l~~~~~~~Pv~Vqi~g~-d~~~~~ 219 (487)
+.|++++||++.++.. ++..+++.|..++..++.. .+.+++... .+++.. .+.+++.+|... ..++..
T Consensus 86 ~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~---~le~~~~~~~~v~r~~-P~~~~ianig~~~~~e~~~ 161 (365)
T 3sr7_A 86 DFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYST---ALKNPDDTSYQVKKSR-PHLLLATNIGLDKPYQAGL 161 (365)
T ss_dssp SSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC---------------------------CCEEEEEETTSCHHHHH
T ss_pred cCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccc---cccCccccceEehhhC-CCCcEEEEeCCCCCHHHHH
Confidence 6799999999887755 7788999996665443332 345554311 122322 467888888743 344444
Q ss_pred HHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCC
Q psy7343 220 EAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGC 299 (487)
Q Consensus 220 ~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~ 299 (487)
++++.+. +|++.||+...+...... | ..+++...+.++++++.+++||++|+ ++.+ ...+.++.+.++|+
T Consensus 162 ~~ve~~~--adal~ihln~~qe~~~p~--G---d~~~~~~~~~I~~l~~~~~~PVivK~-vg~g--~s~e~A~~l~~aGa 231 (365)
T 3sr7_A 162 QAVRDLQ--PLFLQVHINLMQELLMPE--G---EREFRSWKKHLSDYAKKLQLPFILKE-VGFG--MDVKTIQTAIDLGV 231 (365)
T ss_dssp HHHHHHC--CSCEEEEECHHHHHTSSS--S---CCCCHHHHHHHHHHHHHCCSCEEEEE-CSSC--CCHHHHHHHHHHTC
T ss_pred HHHHhcC--CCEEEEeccccccccCCC--C---CCcHHHHHHHHHHHHHhhCCCEEEEE-CCCC--CCHHHHHHHHHcCC
Confidence 4554443 455555544322222111 1 23455566788889999999999995 3322 34577889999999
Q ss_pred cEEEEEccccCCCC-------------CCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 300 QLLAVHGRTVDQRG-------------MNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 300 d~I~VhgRt~~~~g-------------~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
|+|.|+|++..+.. ...|.+..+.+.+++... ++|||++|||++..|+.+++ ..|||+|++||++
T Consensus 232 d~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaL-alGAdaV~ig~~~ 310 (365)
T 3sr7_A 232 KTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKAL-VLGAKAVGLSRTM 310 (365)
T ss_dssp CEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHH-HHTCSEEEESHHH
T ss_pred CEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHH-HcCCCEEEECHHH
Confidence 99999776432210 011333446677665443 79999999999999999999 6999999999976
Q ss_pred cc
Q psy7343 366 LY 367 (487)
Q Consensus 366 l~ 367 (487)
+.
T Consensus 311 l~ 312 (365)
T 3sr7_A 311 LE 312 (365)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 50
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.53 E-value=2.3e-14 Score=137.56 Aligned_cols=180 Identities=16% Similarity=0.211 Sum_probs=125.4
Q ss_pred cccccCCCchHHHHHHH---HhCCcc-c-eeccccc-hhhhcChhHHHHHHhcC-CCCCCeeeeeccCCHHHHHHHHHhh
Q psy7343 153 LAPMVDASELPWRLLSR---RYGSHL-C-YTPMVSA-HQFIADKKLRQEILMST-PEDRPLIIQFCGNDSKNLTEAAKLA 225 (487)
Q Consensus 153 lApma~~td~~fr~i~~---~~Ga~l-~-~t~~v~~-~~Ll~~~~~~~~~l~~~-~~~~Pv~Vqi~g~d~~~~~~aa~~~ 225 (487)
+.|+ .|+.+++.+|. ++|++. | +..++.. ...+.+ +... ..+.|+.+|+.++.. .++.+.+
T Consensus 13 l~p~--~t~~~i~~l~~~a~~~g~~~v~v~~~~v~~~~~~l~~-------v~v~~v~~~P~g~~~~~~k~---~~~~~A~ 80 (225)
T 1mzh_A 13 LKPH--LSEKEIEEFVLKSEELGIYAVCVNPYHVKLASSIAKK-------VKVCCVIGFPLGLNKTSVKV---KEAVEAV 80 (225)
T ss_dssp CCTT--CCHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHCSS-------SEEEEEESTTTCCSCHHHHH---HHHHHHH
T ss_pred cCCC--CCHHHHHHHHHHHHHhCCeEEEECHHHHHHHHHHhcC-------CceeeEecCCCCccchhhhH---HHHHHHH
Confidence 4554 58889999988 688755 3 3334432 222220 0100 113455555544322 2233334
Q ss_pred CCcCcEEE--eecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEe---ecccccccHHHHHHHHHHcCCc
Q psy7343 226 EPHCDGID--INIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI---RIYQDVNKTVEYARMLERAGCQ 300 (487)
Q Consensus 226 ~~~~d~Id--iN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi---R~~~d~~~~~e~a~~le~~G~d 300 (487)
+..+|+|| +|+|| . +. .+++.+.+.++++++.++ |+++|+ +.+++.++..++++.++++|+|
T Consensus 81 ~~Gad~Id~viN~g~-~---~~--------~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad 147 (225)
T 1mzh_A 81 RDGAQELDIVWNLSA-F---KS--------EKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGAD 147 (225)
T ss_dssp HTTCSEEEEECCHHH-H---HT--------TCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCS
T ss_pred HcCCCEEEEEecHHH-H---hc--------CChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 45589999 89998 1 11 256777888999999888 999999 5556666788999999999999
Q ss_pred EEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 301 LLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 301 ~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
+|.. +| + .+.|.++++.++.+++.+ ++||+++|||+|++|+.+++ +.|||.|.++++
T Consensus 148 ~I~t--st--g--~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l-~aGA~~iG~s~~ 206 (225)
T 1mzh_A 148 FIKT--ST--G--FAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMI-EAGADRIGTSSG 206 (225)
T ss_dssp EEEC--CC--S--CSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-HTTCSEEEESCH
T ss_pred EEEE--CC--C--CCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHH-HhCchHHHHccH
Confidence 9933 33 2 245668999999999987 79999999999999999999 589998777764
No 51
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.2e-13 Score=135.20 Aligned_cols=181 Identities=13% Similarity=0.140 Sum_probs=124.7
Q ss_pred HHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceee
Q psy7343 165 RLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAK 244 (487)
Q Consensus 165 r~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~ 244 (487)
.....+.|++.+..-.+++ .+.+..+++.+. .++.+|+.|... .. ++.+++ . |+ ..+.
T Consensus 44 A~~~~~~Ga~~l~vvDL~~----~n~~~i~~i~~~----~~~pv~vgGGir-~~-~~~~~l--~--------Ga-~~Vi- 101 (260)
T 2agk_A 44 AKLYKDRDVQGCHVIKLGP----NNDDAAREALQE----SPQFLQVGGGIN-DT-NCLEWL--K--------WA-SKVI- 101 (260)
T ss_dssp HHHHHHTTCTTCEEEEESS----SCHHHHHHHHHH----STTTSEEESSCC-TT-THHHHT--T--------TC-SCEE-
T ss_pred HHHHHHcCCCEEEEEeCCC----CCHHHHHHHHhc----CCceEEEeCCCC-HH-HHHHHh--c--------CC-CEEE-
Confidence 3555667887665544454 344444554432 345566776443 23 666666 4 33 2333
Q ss_pred ccCccccccCC-----hHHHHHHHHHHh-hhccCcEEEEee---------cccccc---cHH-HHHHHHHHcCCcEEEEE
Q psy7343 245 RGHYGAYLQDD-----WPLLTNLVSSLR-QAVQVPVSCKIR---------IYQDVN---KTV-EYARMLERAGCQLLAVH 305 (487)
Q Consensus 245 ~gr~G~~l~~d-----~~~i~eiv~~v~-~~~~iPV~vKiR---------~~~d~~---~~~-e~a~~le~~G~d~I~Vh 305 (487)
.|+.+..| |+++.++++.+. +.+-+++.+|.+ .+|... +.. ++++.+++. ++.|.+|
T Consensus 102 ---igs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t 177 (260)
T 2agk_A 102 ---VTSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIH 177 (260)
T ss_dssp ---ECGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEE
T ss_pred ---ECcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEE
Confidence 35555667 999999999987 544455555522 134332 456 999999999 9999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHhhC----CCcEEEcCCCCCHHHHHHHHHhc-CCcEEEecccc--ccCc-ccccC
Q psy7343 306 GRTVDQRGMNTGLASWEHITAVRKAL----TIPVIANGNIQCLADVEACLAQT-GVAGVMTAEGN--LYNP-ALFTG 374 (487)
Q Consensus 306 gRt~~~~g~~~g~~~~~~i~~i~~~~----~iPVi~nGgI~s~~da~~~l~~~-Gad~VmiGRa~--l~~P-~lf~~ 374 (487)
++++.+. +.|+ +|+.++++++.+ ++|||++|||.|++|+.++++.+ ||++||+||++ +.++ +.|.+
T Consensus 178 ~i~~dG~--~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~ 251 (260)
T 2agk_A 178 AADVEGL--CGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFED 251 (260)
T ss_dssp C---------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHH
T ss_pred eeccccC--cCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHH
Confidence 9999876 6775 999999999999 99999999999999999999766 99999999997 8888 88763
No 52
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.47 E-value=5.9e-13 Score=135.07 Aligned_cols=203 Identities=18% Similarity=0.127 Sum_probs=137.5
Q ss_pred CCccccccccCCC------chHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeec-cCCHHHHHH
Q psy7343 148 SPRFILAPMVDAS------ELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC-GNDSKNLTE 220 (487)
Q Consensus 148 ~~~~~lApma~~t------d~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~-g~d~~~~~~ 220 (487)
+.|+++||++... +....+.+.+.|.-. +.+..-... .+++.... .+.|...|+. -.|.+...+
T Consensus 69 ~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~-----~lSt~ss~s---~e~v~~~~-~~~~~wfQlY~~~d~~~~~~ 139 (352)
T 3sgz_A 69 SAPICISPTAFHSIAWPDGEKSTARAAQEANICY-----VISSYASYS---LEDIVAAA-PEGFRWFQLYMKSDWDFNKQ 139 (352)
T ss_dssp SSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEE-----EECTTCSSC---HHHHHHHS-TTCEEEEECCCCSCHHHHHH
T ss_pred CCcceechHHHHHhcCccHHHHHHHHHHHcCCCe-----EeCCCCCCC---HHHHHHhc-cCccceeccccCCCHHHHHH
Confidence 6799999987432 222345566667433 222111111 33343332 2468889987 457777778
Q ss_pred HHHhhCCc-CcEEEeecCCCcc-ee----ecc----------Cc--------ccc---ccCChHHHHHHHHHHhhhccCc
Q psy7343 221 AAKLAEPH-CDGIDINIGCPQM-VA----KRG----------HY--------GAY---LQDDWPLLTNLVSSLRQAVQVP 273 (487)
Q Consensus 221 aa~~~~~~-~d~IdiN~GcP~~-i~----~~g----------r~--------G~~---l~~d~~~i~eiv~~v~~~~~iP 273 (487)
..++++++ +.+|=+....|.. .. +++ .. ++. ..-|+....+.++++++.+++|
T Consensus 140 l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~lr~~~~~P 219 (352)
T 3sgz_A 140 MVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSLLQSITRLP 219 (352)
T ss_dssp HHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHHHHHHCCSC
T ss_pred HHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHHHHHhcCCC
Confidence 88888876 7776666655531 00 000 00 000 1124555566778888889999
Q ss_pred EEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHH
Q psy7343 274 VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACL 351 (487)
Q Consensus 274 V~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l 351 (487)
|++|+. ...+.++.++++|+|+|.|++++..+. ..+++.++.+.++++.+ ++|||++|||++.+|+.+++
T Consensus 220 vivK~v------~~~e~A~~a~~~GaD~I~vsn~GG~~~--d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaL 291 (352)
T 3sgz_A 220 IILKGI------LTKEDAELAMKHNVQGIVVSNHGGRQL--DEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKAL 291 (352)
T ss_dssp EEEEEE------CSHHHHHHHHHTTCSEEEECCGGGTSS--CSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH
T ss_pred EEEEec------CcHHHHHHHHHcCCCEEEEeCCCCCcc--CCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHH
Confidence 999974 235668899999999999977655443 44678899999998887 79999999999999999999
Q ss_pred HhcCCcEEEeccccccC
Q psy7343 352 AQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 352 ~~~Gad~VmiGRa~l~~ 368 (487)
..|||+||+||+++..
T Consensus 292 -alGA~aV~iGr~~l~~ 307 (352)
T 3sgz_A 292 -ALGARCIFLGRPILWG 307 (352)
T ss_dssp -HTTCSEEEESHHHHHH
T ss_pred -HcCCCEEEECHHHHHH
Confidence 6899999999987654
No 53
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.44 E-value=1.4e-12 Score=133.40 Aligned_cols=187 Identities=19% Similarity=0.188 Sum_probs=129.3
Q ss_pred CCccccccccCCCchHHHH-HHHHhCCccceeccccchhhhcChhHHHHHHh--cCCCCCCeeeeeccCCHHHHHHHHHh
Q psy7343 148 SPRFILAPMVDASELPWRL-LSRRYGSHLCYTPMVSAHQFIADKKLRQEILM--STPEDRPLIIQFCGNDSKNLTEAAKL 224 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~-i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~--~~~~~~Pv~Vqi~g~d~~~~~~aa~~ 224 (487)
+.|++.+||.++++..+.. +++..|.++... . .+++...+.++ ....+.|+.+.+..++ .+.++.
T Consensus 45 ~~Pii~apM~~vt~~~lA~avA~~GGlgii~~-~-------~s~e~~~~~I~~vk~~~~~pvga~ig~~~----~e~a~~ 112 (361)
T 3khj_A 45 KIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-N-------MDMESQVNEVLKVKNSGGLRVGAAIGVNE----IERAKL 112 (361)
T ss_dssp SSSEEECSSTTTCSHHHHHHHHHTTCEEEECS-S-------SCHHHHHHHHHHHHHTTCCCCEEEECTTC----HHHHHH
T ss_pred CCCEEeecCCCCCcHHHHHHHHHcCCCeEEec-C-------CCHHHHHHHHHHHHhccCceEEEEeCCCH----HHHHHH
Confidence 5689999999999988875 555666555432 1 12222222332 1224578999987554 333333
Q ss_pred -hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEE
Q psy7343 225 -AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLA 303 (487)
Q Consensus 225 -~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~ 303 (487)
++..+|.|.||.+. + +++.+.+.++.+++..++||+++. . ...+.++.++++|+|+|.
T Consensus 113 l~eaGad~I~ld~a~-------G--------~~~~~~~~i~~i~~~~~~~Vivg~-----v-~t~e~A~~l~~aGaD~I~ 171 (361)
T 3khj_A 113 LVEAGVDVIVLDSAH-------G--------HSLNIIRTLKEIKSKMNIDVIVGN-----V-VTEEATKELIENGADGIK 171 (361)
T ss_dssp HHHTTCSEEEECCSC-------C--------SBHHHHHHHHHHHHHCCCEEEEEE-----E-CSHHHHHHHHHTTCSEEE
T ss_pred HHHcCcCeEEEeCCC-------C--------CcHHHHHHHHHHHHhcCCcEEEcc-----C-CCHHHHHHHHHcCcCEEE
Confidence 34448888888553 1 456667778888888899999842 2 346678889999999999
Q ss_pred EEccc-------cCCCCCCCCCCCHHHHHHHHh---hCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 304 VHGRT-------VDQRGMNTGLASWEHITAVRK---ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 304 VhgRt-------~~~~g~~~g~~~~~~i~~i~~---~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+ |-+ +... ..|.+.++.+.++++ .+++|||++|||.+.+|+.+++ ..|||+||+|++++..+.-
T Consensus 172 V-G~~~Gs~~~tr~~~--g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kal-a~GAd~V~vGs~~~~t~Es 245 (361)
T 3khj_A 172 V-GIGPGSICTTRIVA--GVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL-AVGASSVMIGSILAGTEES 245 (361)
T ss_dssp E-CSSCCTTCCHHHHT--CBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHH-HHTCSEEEESTTTTTBTTS
T ss_pred E-ecCCCcCCCccccc--CCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHH-HcCCCEEEEChhhhcCCcC
Confidence 9 421 1111 123456777777754 4589999999999999999999 6899999999999998754
No 54
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.44 E-value=9.2e-13 Score=137.07 Aligned_cols=141 Identities=21% Similarity=0.202 Sum_probs=101.0
Q ss_pred eeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeeccccc
Q psy7343 206 LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDV 284 (487)
Q Consensus 206 v~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~ 284 (487)
+.+.+.. +++....+...++..+|.|+||.++ | +++.+.++++++++.+ ++||+++. .
T Consensus 144 ~~~~i~~-~~~~~~~a~~~~~~G~d~i~i~~~~----------g-----~~~~~~e~i~~ir~~~~~~pviv~~-----v 202 (404)
T 1eep_A 144 VGAAVSI-DIDTIERVEELVKAHVDILVIDSAH----------G-----HSTRIIELIKKIKTKYPNLDLIAGN-----I 202 (404)
T ss_dssp CEEEECS-CTTHHHHHHHHHHTTCSEEEECCSC----------C-----SSHHHHHHHHHHHHHCTTCEEEEEE-----E
T ss_pred EEEEeCC-ChhHHHHHHHHHHCCCCEEEEeCCC----------C-----ChHHHHHHHHHHHHHCCCCeEEEcC-----C
Confidence 4555543 2233333333444458999998654 1 4577888888999888 89999742 2
Q ss_pred ccHHHHHHHHHHcCCcEEEEEcc-------ccCCCCCCCCCCCHHHHHHHHh---hCCCcEEEcCCCCCHHHHHHHHHhc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGR-------TVDQRGMNTGLASWEHITAVRK---ALTIPVIANGNIQCLADVEACLAQT 354 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgR-------t~~~~g~~~g~~~~~~i~~i~~---~~~iPVi~nGgI~s~~da~~~l~~~ 354 (487)
...+.++.++++|+|+|.+ |. +.... ..|.+.++.+.++++ ..++|||++|||.+++|+.+++ ..
T Consensus 203 -~~~~~a~~a~~~Gad~I~v-g~~~G~~~~~~~~~--~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~al-a~ 277 (404)
T 1eep_A 203 -VTKEAALDLISVGADCLKV-GIGPGSICTTRIVA--GVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAI-AA 277 (404)
T ss_dssp -CSHHHHHHHHTTTCSEEEE-CSSCSTTSHHHHHH--CCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHH-HH
T ss_pred -CcHHHHHHHHhcCCCEEEE-CCCCCcCcCccccC--CCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHH-Hc
Confidence 2357788899999999999 32 11111 124456777776665 5689999999999999999999 68
Q ss_pred CCcEEEeccccccCcccc
Q psy7343 355 GVAGVMTAEGNLYNPALF 372 (487)
Q Consensus 355 Gad~VmiGRa~l~~P~lf 372 (487)
|||+|++||+++..|+..
T Consensus 278 GAd~V~iG~~~l~~~e~~ 295 (404)
T 1eep_A 278 GADSVMIGNLFAGTKESP 295 (404)
T ss_dssp TCSEEEECHHHHTBTTSS
T ss_pred CCCHHhhCHHHhcCCCCC
Confidence 999999999999998774
No 55
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.40 E-value=8.8e-13 Score=127.47 Aligned_cols=156 Identities=21% Similarity=0.258 Sum_probs=113.6
Q ss_pred HHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcC
Q psy7343 220 EAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAG 298 (487)
Q Consensus 220 ~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G 298 (487)
+.|++++++ +.+|-..-+||..+...| |.+.+.||+.+.+ |++++++||+.|.|++. ..-++.+++.|
T Consensus 22 eqa~iae~aGa~av~~l~~~p~d~r~~g--Gv~Rm~dp~~I~~----I~~aVsIPVm~k~righ-----~~EAqilea~G 90 (291)
T 3o07_A 22 EQAKIAEKSGACAVMALESIPADMRKSG--KVCRMSDPKMIKD----IMNSVSIPVMAKVRIGH-----FVEAQIIEALE 90 (291)
T ss_dssp HHHHHHHHHTCSEEEECSSCHHHHHTTT--CCCCCCCHHHHHH----HHTTCSSCEEEEEETTC-----HHHHHHHHHTT
T ss_pred HHHHHHHHhCchhhhhccCCCchhhhcC--CccccCCHHHHHH----HHHhCCCCeEEEEecCc-----HHHHHHHHHcC
Confidence 456666666 788999999998765444 6677889998876 56788999999999873 44466777777
Q ss_pred CcEEEEEc-----------------------------------------cccCC----------------------CCCC
Q psy7343 299 CQLLAVHG-----------------------------------------RTVDQ----------------------RGMN 315 (487)
Q Consensus 299 ~d~I~Vhg-----------------------------------------Rt~~~----------------------~g~~ 315 (487)
+|.|.-+- ||... -.+|
T Consensus 91 aD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~ 170 (291)
T 3o07_A 91 VDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQL 170 (291)
T ss_dssp CSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTC
T ss_pred CCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcC
Confidence 77774321 11100 0012
Q ss_pred -----------CCCCCHHHHHHHHhhCCCcE--EEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccccCCCCCcHHH
Q psy7343 316 -----------TGLASWEHITAVRKALTIPV--IANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWEL 382 (487)
Q Consensus 316 -----------~g~~~~~~i~~i~~~~~iPV--i~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~~~~~~~~~ 382 (487)
.-.++|+.++++++..++|| |+||||.|++|+.+++ ++|||+||||||++..++. ...
T Consensus 171 ~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~l-e~GaDGVmVGrAI~~s~DP--------~~~ 241 (291)
T 3o07_A 171 KSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLM-QLGCDGVFVGSGIFKSSNP--------VRL 241 (291)
T ss_dssp CCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHH-HTTCSCEEECGGGGGSSCH--------HHH
T ss_pred CCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHH-HhCCCEEEEchHHhCCCCH--------HHH
Confidence 11468999999999999998 5699999999999999 7999999999999985443 234
Q ss_pred HHHHHHHHHHcCh
Q psy7343 383 ASEYLDLVAQYPV 395 (487)
Q Consensus 383 ~~~~l~~~~~~~~ 395 (487)
.+.|.+.+..|.+
T Consensus 242 Akafv~Av~~~~~ 254 (291)
T 3o07_A 242 ATAVVEATTHFDN 254 (291)
T ss_dssp HHHHHHHHHTTTC
T ss_pred HHHHHHHHHhccC
Confidence 5666666666643
No 56
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.39 E-value=1.1e-12 Score=141.58 Aligned_cols=149 Identities=17% Similarity=0.114 Sum_probs=110.7
Q ss_pred HHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEee---------------------
Q psy7343 221 AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIR--------------------- 279 (487)
Q Consensus 221 aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR--------------------- 279 (487)
+.+.++..+|.|.||.+| ......-.-++.++.+++++.++.+..-+. .+-+.+..|
T Consensus 353 a~~~l~aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~-~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~ 430 (555)
T 1jvn_A 353 ASLYFRSGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYGAQ-AVVISVDPKRVYVNSQADTKNKVFETEYPG 430 (555)
T ss_dssp HHHHHHHTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHCGG-GEEEEECEEEEEESSGGGCSSCCEECSSCC
T ss_pred HHHHHHcCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhCCC-cEEEEEEccccccccccccccccccccccC
Confidence 334444458999999887 321100000223467899999988865321 122222221
Q ss_pred -------------ccccc---ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCC
Q psy7343 280 -------------IYQDV---NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQC 343 (487)
Q Consensus 280 -------------~~~d~---~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s 343 (487)
.||+. .+..++++.+++.|++.|++|++++.+. +.| .+|+.++++++.+++|||++|||.|
T Consensus 431 ~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~--~~G-~d~~li~~l~~~~~iPVIasGGi~s 507 (555)
T 1jvn_A 431 PNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGS--NSG-YDLELIEHVKDAVKIPVIASSGAGV 507 (555)
T ss_dssp TTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTT--CSC-CCHHHHHHHHHHCSSCEEECSCCCS
T ss_pred CCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCC--CCC-CCHHHHHHHHHhCCccEEEECCCCC
Confidence 13332 3578999999999999999999988876 666 5999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEeccccccCcccccC
Q psy7343 344 LADVEACLAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 344 ~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
.+|+.++++.+||++|++||+++.+++.|.+
T Consensus 508 ~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e 538 (555)
T 1jvn_A 508 PEHFEEAFLKTRADACLGAGMFHRGEFTVND 538 (555)
T ss_dssp HHHHHHHHHHSCCSEEEESHHHHTTSCCHHH
T ss_pred HHHHHHHHHhcCChHHHHHHHHHcCCCCHHH
Confidence 9999999966899999999999999999863
No 57
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.38 E-value=2.9e-12 Score=123.69 Aligned_cols=151 Identities=19% Similarity=0.265 Sum_probs=111.2
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcE--------
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPV-------- 274 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV-------- 274 (487)
+.|+.+..+-.++++..++.. ..+|.|-+ |+.++.+++.+.++++.+.....+.+
T Consensus 74 ~ipv~v~ggi~~~~~~~~~l~---~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~ 136 (244)
T 2y88_A 74 DVQVELSGGIRDDESLAAALA---TGCARVNV--------------GTAALENPQWCARVIGEHGDQVAVGLDVQIIDGE 136 (244)
T ss_dssp SSEEEEESSCCSHHHHHHHHH---TTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEEEETTE
T ss_pred CCcEEEECCCCCHHHHHHHHH---cCCCEEEE--------------CchHhhChHHHHHHHHHcCCCEEEEEeccccCCC
Confidence 578888766667776443332 22333322 33334678888888887654332222
Q ss_pred -EEEeeccccc--ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHH
Q psy7343 275 -SCKIRIYQDV--NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACL 351 (487)
Q Consensus 275 -~vKiR~~~d~--~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l 351 (487)
.+++| +|.. .+..++++.+++.|++.|.+|+|++.+. +.| .+|+.++++++.+++||+++|||.+.+|+.+++
T Consensus 137 ~~v~~~-g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~--~~g-~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~ 212 (244)
T 2y88_A 137 HRLRGR-GWETDGGDLWDVLERLDSEGCSRFVVTDITKDGT--LGG-PNLDLLAGVADRTDAPVIASGGVSSLDDLRAIA 212 (244)
T ss_dssp EEEEEG-GGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTT--TSC-CCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHH
T ss_pred CEEEEC-CccCCCCCHHHHHHHHHhCCCCEEEEEecCCccc--cCC-CCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHH
Confidence 34455 4422 2678999999999999999999987654 445 489999999999999999999999999999999
Q ss_pred Hhc--CCcEEEeccccccCcccccC
Q psy7343 352 AQT--GVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 352 ~~~--Gad~VmiGRa~l~~P~lf~~ 374 (487)
+.+ |||+||+||+++.+|+.|.+
T Consensus 213 ~~~~~Gad~v~vG~al~~~~~~~~~ 237 (244)
T 2y88_A 213 TLTHRGVEGAIVGKALYARRFTLPQ 237 (244)
T ss_dssp TTGGGTEEEEEECHHHHTTSSCHHH
T ss_pred hhccCCCCEEEEcHHHHCCCcCHHH
Confidence 444 99999999999999998763
No 58
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.32 E-value=4.2e-11 Score=121.95 Aligned_cols=187 Identities=16% Similarity=0.129 Sum_probs=123.5
Q ss_pred CCccccccccCCCchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhC
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAE 226 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~ 226 (487)
+.|+++|||..+++..+...+.+.|. ++.. .. ...+...+.++.. ...+.+.+. +.+...+.++.+.
T Consensus 42 ~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~-~~-------~s~ee~~~~i~~~--~~~~~~~~g--~~~~~~e~~~~a~ 109 (361)
T 3r2g_A 42 NLPVISANMDTITESNMANFMHSKGAMGALH-RF-------MTIEENIQEFKKC--KGPVFVSVG--CTENELQRAEALR 109 (361)
T ss_dssp SSCEEECCSTTTCSHHHHHHHHHTTCEEBCC-SC-------SCHHHHHHHHHTC--CSCCBEEEC--SSHHHHHHHHHHH
T ss_pred CCCEEECCCCCchHHHHHHHHHHcCCCEEEe-CC-------CCHHHHHHHHhhc--ceEEEEEcC--CCHHHHHHHHHHH
Confidence 67999999999999999888778774 2222 11 2222233333221 123333332 3344555666555
Q ss_pred Cc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEE
Q psy7343 227 PH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAV 304 (487)
Q Consensus 227 ~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~V 304 (487)
++ +|.|.++..+. ..+.+.++++.+++.. ++||+++ ++ ...+.++.++++|+|+|.|
T Consensus 110 ~aGvdvI~id~a~G---------------~~~~~~e~I~~ir~~~~~~~Vi~G-----~V-~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 110 DAGADFFCVDVAHA---------------HAKYVGKTLKSLRQLLGSRCIMAG-----NV-ATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HTTCCEEEEECSCC---------------SSHHHHHHHHHHHHHHTTCEEEEE-----EE-CSHHHHHHHHHTTCSEEEE
T ss_pred HcCCCEEEEeCCCC---------------CcHhHHHHHHHHHHhcCCCeEEEc-----Cc-CCHHHHHHHHHcCCCEEEE
Confidence 54 88888875441 1234567778888876 7899995 22 3456688899999999999
Q ss_pred Ecccc-CCC----CCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 305 HGRTV-DQR----GMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 305 hgRt~-~~~----g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
|-.. ... ....+.+.++.+.++++... |||++|||.+..|+.+++ ..|||+||+||+++....
T Consensus 169 -g~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kAL-a~GAd~V~iGr~f~~t~E 236 (361)
T 3r2g_A 169 -GIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKAL-AFGADFVMIGGMLAGSAP 236 (361)
T ss_dssp -CCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHH-HTTCSEEEESGGGTTBTT
T ss_pred -cCCCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHH-HcCCCEEEEChHHhCCcc
Confidence 3111 000 00113456777777776666 999999999999999999 689999999999998854
No 59
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.28 E-value=3.6e-11 Score=122.97 Aligned_cols=190 Identities=20% Similarity=0.190 Sum_probs=119.9
Q ss_pred CCccccccccCCCchHHHH-HHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeec-cCCHHHHHHHHHh-
Q psy7343 148 SPRFILAPMVDASELPWRL-LSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC-GNDSKNLTEAAKL- 224 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~-i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~-g~d~~~~~~aa~~- 224 (487)
+.|++.+||.++++..+.. +++..|.++... . .+++...+.++......++.+.+. +.+++ +.+.++.
T Consensus 46 ~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~-----~---~s~e~~~~~i~~vk~~~~l~vga~vg~~~~-~~~~~~~l 116 (366)
T 4fo4_A 46 NIPMVSASMDTVTEARLAIALAQEGGIGFIHK-----N---MSIEQQAAQVHQVKISGGLRVGAAVGAAPG-NEERVKAL 116 (366)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHTTCEEEECS-----S---SCHHHHHHHHHHHHTTTSCCCEEECCSCTT-CHHHHHHH
T ss_pred CCCEEeCCCCCCChHHHHHHHHHcCCceEeec-----C---CCHHHHHHHHHHHHhcCceeEEEEeccChh-HHHHHHHH
Confidence 5689999999999987764 444445343321 1 133333333321111123434432 22222 2333333
Q ss_pred hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEE
Q psy7343 225 AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLA 303 (487)
Q Consensus 225 ~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~ 303 (487)
++..+|.|.||... + +++...+.++.+++.. ++||++. +. ...+.++.++++|+|+|.
T Consensus 117 ieaGvd~I~idta~-------G--------~~~~~~~~I~~ik~~~p~v~Vi~G-----~v-~t~e~A~~a~~aGAD~I~ 175 (366)
T 4fo4_A 117 VEAGVDVLLIDSSH-------G--------HSEGVLQRIRETRAAYPHLEIIGG-----NV-ATAEGARALIEAGVSAVK 175 (366)
T ss_dssp HHTTCSEEEEECSC-------T--------TSHHHHHHHHHHHHHCTTCEEEEE-----EE-CSHHHHHHHHHHTCSEEE
T ss_pred HhCCCCEEEEeCCC-------C--------CCHHHHHHHHHHHHhcCCCceEee-----ee-CCHHHHHHHHHcCCCEEE
Confidence 34447888777432 1 3455666777888776 7888773 22 345677888999999999
Q ss_pred EEcccc-------CCCCCCCCCCCHHHHHHHHh---hCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 304 VHGRTV-------DQRGMNTGLASWEHITAVRK---ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 304 VhgRt~-------~~~g~~~g~~~~~~i~~i~~---~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+ |-.. ... ..|.+.++.+.++++ .+++|||+.|||.+..|+.+++ ..|||+||+|+.++..+.-
T Consensus 176 v-G~gpGs~~~tr~~~--g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kal-a~GAd~V~vGs~f~~t~Es 249 (366)
T 4fo4_A 176 V-GIGPGSICTTRIVT--GVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAI-AAGASCVMVGSMFAGTEEA 249 (366)
T ss_dssp E-CSSCSTTBCHHHHH--CCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTTTTTBTTS
T ss_pred E-ecCCCCCCCccccc--CcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHH-HcCCCEEEEChHhhcCCCC
Confidence 9 4211 111 123456777777765 4689999999999999999999 6899999999999987653
No 60
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.28 E-value=6.3e-11 Score=122.75 Aligned_cols=202 Identities=16% Similarity=0.151 Sum_probs=127.0
Q ss_pred CCccccccccCCCchHHHHHHHHhCC-ccceeccccc----------------h--------hh------hc-ChhHHHH
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSA----------------H--------QF------IA-DKKLRQE 195 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga-~l~~t~~v~~----------------~--------~L------l~-~~~~~~~ 195 (487)
+.|+++|||+++++..+...+.+.|. +++.++|+.. . .+ .. +++...+
T Consensus 67 ~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~ 146 (393)
T 2qr6_A 67 DLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSE 146 (393)
T ss_dssp SSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred CCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHH
Confidence 67999999999999887666666654 6666533110 0 00 11 4444444
Q ss_pred HHh-cCCCCCCeeeeeccCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCc
Q psy7343 196 ILM-STPEDRPLIIQFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVP 273 (487)
Q Consensus 196 ~l~-~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iP 273 (487)
+++ ....+.++.+++.+.+..+.. +.+.+ ..|.+.+| +.|. ...+. +..+ +|+.+. ++++.+++|
T Consensus 147 ~i~~~~~~g~~v~~~v~~~~~~e~a---~~~~~agad~i~i~-~~~~-~~~~~--~~~~--~~~~i~----~l~~~~~~p 213 (393)
T 2qr6_A 147 RIAQVRDSGEIVAVRVSPQNVREIA---PIVIKAGADLLVIQ-GTLI-SAEHV--NTGG--EALNLK----EFIGSLDVP 213 (393)
T ss_dssp HHHHHHHTTSCCEEEECTTTHHHHH---HHHHHTTCSEEEEE-CSSC-CSSCC--CC-------CHH----HHHHHCSSC
T ss_pred HHHHHhhcCCeEEEEeCCccHHHHH---HHHHHCCCCEEEEe-CCcc-ccccC--CCcc--cHHHHH----HHHHhcCCC
Confidence 443 122367888888765544333 33323 36777776 3321 00111 1111 344333 456667999
Q ss_pred EEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCC--CCCCCCCHHHHHHHHhh-------CC---CcEEEcCCC
Q psy7343 274 VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRG--MNTGLASWEHITAVRKA-------LT---IPVIANGNI 341 (487)
Q Consensus 274 V~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g--~~~g~~~~~~i~~i~~~-------~~---iPVi~nGgI 341 (487)
|++++ +.+. +.++.+.++|+|+|+| |++..... ...|.+.++.+.++++. ++ +|||++|||
T Consensus 214 vi~gg-----i~t~-e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI 286 (393)
T 2qr6_A 214 VIAGG-----VNDY-TTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSI 286 (393)
T ss_dssp EEEEC-----CCSH-HHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSC
T ss_pred EEECC-----cCCH-HHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCC
Confidence 99963 4344 4467778899999999 66221000 01246677888877766 44 999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 342 QCLADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 342 ~s~~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
++.+|+.+++ ..|||+|++||+++..+.
T Consensus 287 ~~~~dv~kal-alGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 287 ENSGDVVKAI-ACGADAVVLGSPLARAEE 314 (393)
T ss_dssp CSHHHHHHHH-HHTCSEEEECGGGGGSTT
T ss_pred CCHHHHHHHH-HcCCCEEEECHHHHcCCC
Confidence 9999999999 689999999999998876
No 61
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.26 E-value=3.6e-11 Score=116.19 Aligned_cols=151 Identities=18% Similarity=0.232 Sum_probs=104.2
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEE---e-
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCK---I- 278 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vK---i- 278 (487)
+.|+.+...-.++++..++.. ..+|.| .. |+....+++.+.++++.....+.+.+.++ +
T Consensus 75 ~ipv~v~ggI~~~~~~~~~l~---~Gad~V----------~l----g~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~ 137 (244)
T 1vzw_A 75 DIKVELSGGIRDDDTLAAALA---TGCTRV----------NL----GTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLR 137 (244)
T ss_dssp SSEEEEESSCCSHHHHHHHHH---TTCSEE----------EE----CHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEEC
T ss_pred CCcEEEECCcCCHHHHHHHHH---cCCCEE----------EE----CchHhhCHHHHHHHHHHcCCcEEEEEEccCCEEE
Confidence 578888766567766433332 223333 22 33334578888888776543333333332 1
Q ss_pred eccccc--ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhc--
Q psy7343 279 RIYQDV--NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQT-- 354 (487)
Q Consensus 279 R~~~d~--~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~-- 354 (487)
+.+|+. .+..++++.+++.|++.|.+|++++.+. +.| .+|+.++++++.+++||+++|||++++|+.++++.+
T Consensus 138 ~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~--~~g-~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~ 214 (244)
T 1vzw_A 138 GRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGT--LQG-PNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPA 214 (244)
T ss_dssp CSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC---------C-CCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGG
T ss_pred EcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccc--cCC-CCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccC
Confidence 113322 1678889999999999999998876543 344 489999999999999999999999999999999444
Q ss_pred CCcEEEeccccccCccccc
Q psy7343 355 GVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 355 Gad~VmiGRa~l~~P~lf~ 373 (487)
|||+|++|++++.+||.|.
T Consensus 215 Gadgv~vG~al~~~~~~~~ 233 (244)
T 1vzw_A 215 GVEGAIVGKALYAKAFTLE 233 (244)
T ss_dssp TEEEEEECHHHHTTSSCHH
T ss_pred CCceeeeeHHHHcCCCCHH
Confidence 9999999999999998865
No 62
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=6.8e-12 Score=124.67 Aligned_cols=160 Identities=23% Similarity=0.265 Sum_probs=108.6
Q ss_pred HHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccc--------------
Q psy7343 219 TEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQD-------------- 283 (487)
Q Consensus 219 ~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d-------------- 283 (487)
.+.|+.++++ +++|.... |..-..+...|.+++++++.+.++. +++++||+.|.|+|+.
T Consensus 27 ~e~A~~ae~aGA~aI~~l~--~v~~d~~~~~G~arm~~p~~i~~I~----~av~iPV~~K~rig~~~e~qilea~GaD~I 100 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALE--RVPADIRAAGGVARMSDPALIEEIM----DAVSIPVMAKCRIGHTTEALVLEAIGVDMI 100 (330)
T ss_dssp HHHHHHHHHHTCSEEEECS--SCHHHHC--CCCCCCCCHHHHHHHH----HHCSSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEecC--CccccccCCcchhhcCCHHHHHHHH----HhcCCCeEEEEeecchHHHHHHHHcCCCEE
Confidence 4466666665 67773322 4432233334778899999988865 4679999999999762
Q ss_pred ----------c-----------------ccHHHHHHHHHHcCCcEEEEEc--------------cc------------cC
Q psy7343 284 ----------V-----------------NKTVEYARMLERAGCQLLAVHG--------------RT------------VD 310 (487)
Q Consensus 284 ----------~-----------------~~~~e~a~~le~~G~d~I~Vhg--------------Rt------------~~ 310 (487)
. .+..++++++ +.|++.|..|| |+ ..
T Consensus 101 d~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~~ 179 (330)
T 2yzr_A 101 DESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDE 179 (330)
T ss_dssp EEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred ehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCHH
Confidence 0 1366777777 78999999998 55 11
Q ss_pred CCC--CCCCCCCH-------------------------------------HHHHHHHhhCCCcE--EEcCCCCCHHHHHH
Q psy7343 311 QRG--MNTGLASW-------------------------------------EHITAVRKALTIPV--IANGNIQCLADVEA 349 (487)
Q Consensus 311 ~~g--~~~g~~~~-------------------------------------~~i~~i~~~~~iPV--i~nGgI~s~~da~~ 349 (487)
+.. .....++| +.++++++..++|| +++|||.|++|+.+
T Consensus 180 El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV~VAeGGI~Tpeda~~ 259 (330)
T 2yzr_A 180 EVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVNFAAGGVATPADAAL 259 (330)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSEEEECSCCCSHHHHHH
T ss_pred HHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeEEEEECCCCCHHHHHH
Confidence 110 00011233 88899999889999 69999999999999
Q ss_pred HHHhcCCcEEEeccccccCcccccCCCCCcHHHHHHHHHHHHHcC
Q psy7343 350 CLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQYP 394 (487)
Q Consensus 350 ~l~~~Gad~VmiGRa~l~~P~lf~~~~~~~~~~~~~~l~~~~~~~ 394 (487)
++ +.|||+|+||++++..++. .+..+++.+.+..|.
T Consensus 260 ~l-~~GaDgV~VGsaI~~a~dP--------~~aar~l~~ai~~~~ 295 (330)
T 2yzr_A 260 MM-QLGSDGVFVGSGIFKSENP--------LERARAIVEATYNYD 295 (330)
T ss_dssp HH-HTTCSCEEESHHHHTSSCH--------HHHHHHHHHHHHTTT
T ss_pred HH-HcCcCEEeeHHHHhcCCCH--------HHHHHHHHHHHHhcC
Confidence 99 5699999999999944322 123455555555554
No 63
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.22 E-value=6.3e-12 Score=121.93 Aligned_cols=151 Identities=21% Similarity=0.239 Sum_probs=27.1
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHh-hhccCcEEEE----
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLR-QAVQVPVSCK---- 277 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~-~~~~iPV~vK---- 277 (487)
+.||++.=.-.++++..++. +..+|+| . .|..++.+|+.+.++.+.+- +.+-+.+.++
T Consensus 79 ~ipvi~~Ggi~~~~~~~~~l---~~Gad~V----------~----ig~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~~~ 141 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFLEAF---LRGADKV----------S----INTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDG 141 (247)
T ss_dssp CSCEEEESCCCSHHHHHHHH---HTTCSEE----------C----CSHHHHHCTHHHHHHHHHHC---------------
T ss_pred CCCEEEeCCCCCHHHHHHHH---HcCCCee----------e----hhhHHhhChHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 67887764445666654443 2223332 2 24444568888888777652 2221223222
Q ss_pred -----eeccccc---ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHH
Q psy7343 278 -----IRIYQDV---NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEA 349 (487)
Q Consensus 278 -----iR~~~d~---~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~ 349 (487)
++ +|.. .+..++++.+++.|++.|.+|++++.+. +.| .+++.++++++.+++|||++|||.|++|+.+
T Consensus 142 ~~~v~~~-g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~--~~g-~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~ 217 (247)
T 3tdn_A 142 EFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT--KSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLE 217 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEC-CCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCC--cCC-CCHHHHHHHHHhCCCCEEEECCCCCHHHHHH
Confidence 21 3322 3567889999999999999998876543 444 5889999999999999999999999999999
Q ss_pred HHHhcCCcEEEeccccccCcccccCC
Q psy7343 350 CLAQTGVAGVMTAEGNLYNPALFTGQ 375 (487)
Q Consensus 350 ~l~~~Gad~VmiGRa~l~~P~lf~~~ 375 (487)
++ +.|||+|++||+++.+|++|.+.
T Consensus 218 ~~-~~Gad~v~vg~al~~~p~~~~~~ 242 (247)
T 3tdn_A 218 AF-LRGADKVSINTAAVENPSLITQI 242 (247)
T ss_dssp --------------------------
T ss_pred HH-HcCCcHhhccHHHHcCcHHHHHH
Confidence 99 56999999999999999999864
No 64
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.22 E-value=2e-10 Score=118.60 Aligned_cols=106 Identities=21% Similarity=0.257 Sum_probs=82.6
Q ss_pred ChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcc-------ccCCCCCCCCCCCHHHHHHH
Q psy7343 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR-------TVDQRGMNTGLASWEHITAV 327 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgR-------t~~~~g~~~g~~~~~~i~~i 327 (487)
+++.+.++++.+++..++||+++ ++ ...+.++.++++|+|+|.+ |- ++... ..+.+++..+.++
T Consensus 168 ~~~~~~e~I~~ik~~~~i~Vi~g-----~V-~t~e~A~~a~~aGAD~I~v-G~g~Gs~~~tr~~~--g~g~p~~~al~~v 238 (400)
T 3ffs_A 168 HSLNIIRTLKEIKSKMNIDVIVG-----NV-VTEEATKELIENGADGIKV-GIGPGSICTTRIVA--GVGVPQITAIEKC 238 (400)
T ss_dssp SBHHHHHHHHHHHTTCCCEEEEE-----EE-CSHHHHHHHHHTTCSEEEE-CC---------CCS--CBCCCHHHHHHHH
T ss_pred CcccHHHHHHHHHhcCCCeEEEe-----ec-CCHHHHHHHHHcCCCEEEE-eCCCCcCccccccc--ccchhHHHHHHHH
Confidence 35666778888888889999974 22 4467788899999999999 42 22211 2245678888888
Q ss_pred Hhh---CCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 328 RKA---LTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 328 ~~~---~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
++. .++|||++|||.+.+|+.+++ ..|||+||+|++++..+.
T Consensus 239 ~~~~~~~~IPVIA~GGI~~~~di~kal-alGAd~V~vGt~f~~t~E 283 (400)
T 3ffs_A 239 SSVASKFGIPIIADGGIRYSGDIGKAL-AVGASSVMIGSILAGTEE 283 (400)
T ss_dssp HHHHTTTTCCEEEESCCCSHHHHHHHH-TTTCSEEEECGGGTTBTT
T ss_pred HHHHHhcCCCEEecCCCCCHHHHHHHH-HcCCCEEEEChHHhcCCC
Confidence 764 589999999999999999999 789999999999998764
No 65
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.16 E-value=3.9e-10 Score=109.22 Aligned_cols=151 Identities=16% Similarity=0.148 Sum_probs=107.1
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhh-hccCcEEEEe--
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQ-AVQVPVSCKI-- 278 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~-~~~iPV~vKi-- 278 (487)
.+.|+++.=+-+++++..++... .+|+|-+ |..++.+++.+.++.+.... .+-+.+.++.
T Consensus 74 ~~iPvi~~Ggi~~~~~~~~~~~~---Gad~V~l--------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~ 136 (252)
T 1ka9_F 74 VFIPLTVGGGVRSLEDARKLLLS---GADKVSV--------------NSAAVRRPELIRELADHFGAQAVVLAIDARWRG 136 (252)
T ss_dssp CCSCEEEESSCCSHHHHHHHHHH---TCSEEEE--------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCCEEEECCcCCHHHHHHHHHc---CCCEEEE--------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecCC
Confidence 46788887555566654444331 2333322 33444678888887776532 1222333321
Q ss_pred ---e---ccccc---ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHH
Q psy7343 279 ---R---IYQDV---NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEA 349 (487)
Q Consensus 279 ---R---~~~d~---~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~ 349 (487)
+ .+|.. .+..+.++.+++.|++.|.+|++++.+. +.| .+|+.++++++.+++||+++|||.+++|+.+
T Consensus 137 g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~--~~g-~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~ 213 (252)
T 1ka9_F 137 DFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGT--KEG-YDLRLTRMVAEAVGVPVIASGGAGRMEHFLE 213 (252)
T ss_dssp TEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTT--CSC-CCHHHHHHHHHHCSSCEEEESCCCSHHHHHH
T ss_pred CCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCC--cCC-CCHHHHHHHHHHcCCCEEEeCCCCCHHHHHH
Confidence 1 12322 3578899999999999999998766543 444 4899999999999999999999999999999
Q ss_pred HHHhcCCcEEEeccccccCccccc
Q psy7343 350 CLAQTGVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 350 ~l~~~Gad~VmiGRa~l~~P~lf~ 373 (487)
++ ++|||+|++|++++.+|+.+.
T Consensus 214 ~~-~~Gadgv~vgsal~~~~~~~~ 236 (252)
T 1ka9_F 214 AF-QAGAEAALAASVFHFGEIPIP 236 (252)
T ss_dssp HH-HTTCSEEEESHHHHTTSSCHH
T ss_pred HH-HCCCHHHHHHHHHHcCCCCHH
Confidence 99 699999999999999998765
No 66
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.14 E-value=3e-10 Score=109.59 Aligned_cols=121 Identities=12% Similarity=0.126 Sum_probs=89.7
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEE---ee-ccccc---ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCK---IR-IYQDV---NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASW 321 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vK---iR-~~~d~---~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~ 321 (487)
|..++.+|+.+.++ +...+.+-+.+.++ +. .+|+. .+..++++.+++.|++.|.+|++++.+. +.| .+|
T Consensus 102 g~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~--~~g-~~~ 177 (241)
T 1qo2_A 102 SSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGT--LQE-HDF 177 (241)
T ss_dssp CHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHH--TCC-CCH
T ss_pred CchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEeeccccc--CCc-CCH
Confidence 44445678887776 54432221222221 11 13332 2678889999999999999999876543 444 489
Q ss_pred HHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhc----C-CcEEEeccccccCccccc
Q psy7343 322 EHITAVRKALTIPVIANGNIQCLADVEACLAQT----G-VAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 322 ~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~----G-ad~VmiGRa~l~~P~lf~ 373 (487)
+.++++++.+++|||++|||.+++|+.++++.+ | ||+|++|++++..+.-+.
T Consensus 178 ~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~ 234 (241)
T 1qo2_A 178 SLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVE 234 (241)
T ss_dssp HHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHH
T ss_pred HHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHH
Confidence 999999999999999999999999999999655 9 999999999998876543
No 67
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.13 E-value=7.5e-10 Score=107.28 Aligned_cols=151 Identities=18% Similarity=0.189 Sum_probs=106.7
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhh-hccCcEEEEe--
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQ-AVQVPVSCKI-- 278 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~-~~~iPV~vKi-- 278 (487)
.+.|+.+.-+-.++++..++.+ ..+|+|-+ |.....+++.+.++++.+.. .+.+.+.++.
T Consensus 73 ~~ipvi~~ggI~~~~~~~~~~~---~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~ 135 (253)
T 1thf_D 73 IDIPFTVGGGIHDFETASELIL---RGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVD 135 (253)
T ss_dssp CCSCEEEESSCCSHHHHHHHHH---TTCSEEEE--------------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCCEEEeCCCCCHHHHHHHHH---cCCCEEEE--------------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccC
Confidence 4678888765567766444432 22333322 33334578888887776532 2222333321
Q ss_pred ---e---ccccc---ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHH
Q psy7343 279 ---R---IYQDV---NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEA 349 (487)
Q Consensus 279 ---R---~~~d~---~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~ 349 (487)
. .+|.. .+..+.++.+++.|++.|.+|++++.+. +.| .+|+.++++++.+++||+++|||.+.+|+.+
T Consensus 136 g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~--~~g-~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~ 212 (253)
T 1thf_D 136 GEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT--KSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLE 212 (253)
T ss_dssp TEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTS--CSC-CCHHHHHHHGGGCCSCEEEESCCCSHHHHHH
T ss_pred CcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCC--CCC-CCHHHHHHHHHhcCCCEEEECCCCCHHHHHH
Confidence 1 12222 2578889999999999999998776543 444 4899999999999999999999999999999
Q ss_pred HHHhcCCcEEEeccccccCccccc
Q psy7343 350 CLAQTGVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 350 ~l~~~Gad~VmiGRa~l~~P~lf~ 373 (487)
++ ++|||+|++|++++.+|+.+.
T Consensus 213 ~~-~~Gadgv~vGsal~~~~~~~~ 235 (253)
T 1thf_D 213 AF-LAGADAALAASVFHFREIDVR 235 (253)
T ss_dssp HH-HTTCSEEEESHHHHTTCSCHH
T ss_pred HH-HcCChHHHHHHHHHcCCCCHH
Confidence 99 699999999999999987654
No 68
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.10 E-value=7.8e-10 Score=108.03 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=69.1
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
+..++++.+++.|++.|.+|++++.+. +.| .+++.++++++.+++||+++|||.+++|+.+++ ++|||+|++|+++
T Consensus 157 ~~~e~~~~~~~~G~~~i~~t~~~~~g~--~~g-~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~-~~Gadgv~vgsal 232 (266)
T 2w6r_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGT--KSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADAALAASVF 232 (266)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTT--CSC-CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HHTCSEEEESTTT
T ss_pred hHHHHHHHHHHcCCCEEEEEeecCCCC--cCC-CCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHH-HcCCHHHHccHHH
Confidence 578889999999999999988766543 444 489999999999999999999999999999999 6899999999999
Q ss_pred ccCcccccCC
Q psy7343 366 LYNPALFTGQ 375 (487)
Q Consensus 366 l~~P~lf~~~ 375 (487)
+.+|+.+.+.
T Consensus 233 ~~~~~~~~~~ 242 (266)
T 2w6r_A 233 HFREIDMREL 242 (266)
T ss_dssp C---------
T ss_pred HcCCCCHHHH
Confidence 9999887653
No 69
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.06 E-value=2.6e-10 Score=114.28 Aligned_cols=208 Identities=11% Similarity=0.052 Sum_probs=129.4
Q ss_pred CCceEEecCCCC-C-CHHHHHHHHHcCCCeEEccceeccccccCc----------------------HHHHHHhhhC--C
Q psy7343 78 SPRFILAPMVDA-S-ELPWRLLSRRYGSHLCYTPMVSAHQFIADK----------------------KLRQEILMST--P 131 (487)
Q Consensus 78 ~~~~~LAPMag~-t-d~pFR~l~~~~Gadl~~TEMi~a~~l~~~~----------------------~~~~~~~~~~--~ 131 (487)
++++++|+ |+ + |..|+..+.+.|+++++|+|++.+...... ....+.+... .
T Consensus 12 ~npv~~Aa--g~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~~ 89 (311)
T 1jub_A 12 ANPFMNAS--GVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKE 89 (311)
T ss_dssp SSSEEECT--TSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHHH
T ss_pred CCCcEECC--CCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHHh
Confidence 77899996 65 4 899999999999999999999988642111 1111112111 1
Q ss_pred C--CCceeeeeccccCCCCCccccccccCCCchHHH---HHHHHhCCc-cc----eeccc-cchhhhcChhHHHHHHh--
Q psy7343 132 E--DRPLIIQRTIFPRLGSPRFILAPMVDASELPWR---LLSRRYGSH-LC----YTPMV-SAHQFIADKKLRQEILM-- 198 (487)
Q Consensus 132 ~--e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr---~i~~~~Ga~-l~----~t~~v-~~~~Ll~~~~~~~~~l~-- 198 (487)
. +.|+++|+. +..+ ..|. ....+.|++ .. .+|.. .++.+..+++...++++
T Consensus 90 ~~~~~p~~~~i~-----g~~~-----------~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~v 153 (311)
T 1jub_A 90 NAQEGPIFFSIA-----GMSA-----------AENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEV 153 (311)
T ss_dssp TCSSSCCEEEEC-----CSSH-----------HHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHH
T ss_pred cCCCCCEEEEcC-----CCCH-----------HHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHH
Confidence 2 678888963 1111 1122 222334544 21 11222 23455567777777775
Q ss_pred cCCCCCCeeeeecc-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeec---c--------Cccc-cccCChHHHHHHHH
Q psy7343 199 STPEDRPLIIQFCG-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKR---G--------HYGA-YLQDDWPLLTNLVS 264 (487)
Q Consensus 199 ~~~~~~Pv~Vqi~g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~---g--------r~G~-~l~~d~~~i~eiv~ 264 (487)
....+.||++|+.. .+.+++.++++.++++ .|+|.++.........+ . .+|+ ..........+.++
T Consensus 154 r~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~ 233 (311)
T 1jub_A 154 FTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVR 233 (311)
T ss_dssp TTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHH
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHH
Confidence 22337899999984 4777888889999887 88888763320000000 0 0111 01112233456777
Q ss_pred HHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 265 SLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 265 ~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
.+++.+ ++||++.+ ++.+..++.+.+ .+|||+|++ ||.-
T Consensus 234 ~v~~~~~~~ipvi~~G----GI~~~~da~~~l-~~GAd~V~v-g~~~ 274 (311)
T 1jub_A 234 AFYTRLKPEIQIIGTG----GIETGQDAFEHL-LCGATMLQI-GTAL 274 (311)
T ss_dssp HHHTTSCTTSEEEEES----SCCSHHHHHHHH-HHTCSEEEE-CHHH
T ss_pred HHHHhcCCCCCEEEEC----CCCCHHHHHHHH-HcCCCEEEE-chHH
Confidence 788888 89999998 788899999888 579999999 8753
No 70
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.05 E-value=1.3e-09 Score=116.60 Aligned_cols=135 Identities=20% Similarity=0.194 Sum_probs=98.7
Q ss_pred HHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHH
Q psy7343 216 KNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARML 294 (487)
Q Consensus 216 ~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~l 294 (487)
+....+...++..+|.|+||.+| | +++...++++++++.+ ++||+++ ++ ...+.++.+
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~----------G-----~~~~~~~~i~~i~~~~~~~pvi~~-----~v-~t~~~a~~l 313 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQ----------G-----NSVYQIAMVHYIKQKYPHLQVIGG-----NV-VTAAQAKNL 313 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC----------C-----CSHHHHHHHHHHHHHCTTCEEEEE-----EE-CSHHHHHHH
T ss_pred hhHHHHHHHHHcCCCEEEeeccC----------C-----cchhHHHHHHHHHHhCCCCceEec-----cc-chHHHHHHH
Confidence 33334444444448999998776 1 2355667888888888 8999985 22 346678899
Q ss_pred HHcCCcEEEEEccc-------cCCCCC-CCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccc
Q psy7343 295 ERAGCQLLAVHGRT-------VDQRGM-NTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNL 366 (487)
Q Consensus 295 e~~G~d~I~VhgRt-------~~~~g~-~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l 366 (487)
+++|+|+|.+ |.. +...++ ......+..+.++++.+++|||++|||+++.|+.+++ ..|||+||+||+++
T Consensus 314 ~~aGad~I~v-g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kal-a~GAd~V~iG~~~l 391 (514)
T 1jcn_A 314 IDAGVDGLRV-GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKAL-ALGASTVMMGSLLA 391 (514)
T ss_dssp HHHTCSEEEE-CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTTTT
T ss_pred HHcCCCEEEE-CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHH-HcCCCeeeECHHHH
Confidence 9999999999 421 111110 0012245778888888899999999999999999999 68999999999999
Q ss_pred cCccccc
Q psy7343 367 YNPALFT 373 (487)
Q Consensus 367 ~~P~lf~ 373 (487)
.+|+...
T Consensus 392 ~~~e~~~ 398 (514)
T 1jcn_A 392 ATTEAPG 398 (514)
T ss_dssp TSTTSSC
T ss_pred cCCcCCc
Confidence 9987654
No 71
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.05 E-value=6.8e-09 Score=105.78 Aligned_cols=190 Identities=16% Similarity=0.177 Sum_probs=118.0
Q ss_pred CCccccccccCCCchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHhcCCCC-CCeeeeeccCCHHHHHHHHHhh
Q psy7343 148 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPED-RPLIIQFCGNDSKNLTEAAKLA 225 (487)
Q Consensus 148 ~~~~~lApma~~td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~-~Pv~Vqi~g~d~~~~~~aa~~~ 225 (487)
+.|++.+||.+.++..+...+.+.|. +++.. . ...+.....++..+.. .++.+.+ +...+.+..+..++
T Consensus 57 ~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~-----~---~s~e~~~~~i~~~p~~l~~v~~~~-g~~~~~~~~~~~l~ 127 (351)
T 2c6q_A 57 GVPIIAANMDTVGTFEMAKVLCKFSLFTAVHK-----H---YSLVQWQEFAGQNPDCLEHLAASS-GTGSSDFEQLEQIL 127 (351)
T ss_dssp ECCEEECSSTTTSCHHHHHHHHHTTCEEECCT-----T---CCHHHHHHHHHHCGGGCTTEEEEE-CSSHHHHHHHHHHH
T ss_pred cCCEEECCCCCCCcHHHHHHHHHCCCEEEEcC-----C---CCHHHHHHHHhhCchhhheeEeec-CCChHHHHHHHHHH
Confidence 56899999999988777665666652 33221 1 1111121222211111 2455555 33455555555555
Q ss_pred CC--cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEE
Q psy7343 226 EP--HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLL 302 (487)
Q Consensus 226 ~~--~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I 302 (487)
+. ..+.|.++... | ++..+.+.++++++.. ++||+++. +.+ .+.++.+.++|+|+|
T Consensus 128 ~~~~g~~~i~i~~~~----------g-----~~~~~~~~i~~lr~~~~~~~vi~g~-----v~t-~e~A~~a~~aGaD~I 186 (351)
T 2c6q_A 128 EAIPQVKYICLDVAN----------G-----YSEHFVEFVKDVRKRFPQHTIMAGN-----VVT-GEMVEELILSGADII 186 (351)
T ss_dssp HHCTTCCEEEEECSC----------T-----TBHHHHHHHHHHHHHCTTSEEEEEE-----ECS-HHHHHHHHHTTCSEE
T ss_pred hccCCCCEEEEEecC----------C-----CcHHHHHHHHHHHHhcCCCeEEEEe-----CCC-HHHHHHHHHhCCCEE
Confidence 43 35666665321 1 3455667788888888 89999863 323 566788999999999
Q ss_pred EEEcccc-----CCCCCCCCCCCHHHHHHHH---hhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCc
Q psy7343 303 AVHGRTV-----DQRGMNTGLASWEHITAVR---KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 303 ~VhgRt~-----~~~g~~~g~~~~~~i~~i~---~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P 369 (487)
.|..... .+.. -.+.+....+.++. +..++|||+.|||.++.|+.+++ ..|||+|++||.++..+
T Consensus 187 ~v~~g~G~~~~~r~~~-g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAl-alGA~~V~vG~~fl~~~ 259 (351)
T 2c6q_A 187 KVGIGPGSVCTTRKKT-GVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAF-GAGADFVMLGGMLAGHS 259 (351)
T ss_dssp EECSSCSTTBCHHHHH-CBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTTTBT
T ss_pred EECCCCCcCcCccccC-CCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHH-HcCCCceeccHHHhcCc
Confidence 8831110 0000 01234455555554 34589999999999999999999 78999999999998753
No 72
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.04 E-value=8.1e-10 Score=117.62 Aligned_cols=130 Identities=23% Similarity=0.209 Sum_probs=95.7
Q ss_pred HHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHH
Q psy7343 216 KNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARML 294 (487)
Q Consensus 216 ~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~l 294 (487)
+.+..+..+++..+|.|+||.+|| +.+.+.++++++++.. ++||++. ++ ...+.++.+
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g---------------~~~~~~~~i~~ir~~~p~~~Vi~g-----~v-~t~e~a~~l 289 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHG---------------HSEGVLQRIRETRAAYPHLEIIGG-----NV-ATAEGARAL 289 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTCCEEEE-----EE-CSHHHHHHH
T ss_pred chHHHHHHHHhccCceEEeccccc---------------cchHHHHHHHHHHHHCCCceEEEc-----cc-CcHHHHHHH
Confidence 334444445555699999998874 2345667788888887 7899884 22 345677889
Q ss_pred HHcCCcEEEEEc------cccCCCCCCCCCCCHHHHHHHHhh---CCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 295 ERAGCQLLAVHG------RTVDQRGMNTGLASWEHITAVRKA---LTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 295 e~~G~d~I~Vhg------Rt~~~~g~~~g~~~~~~i~~i~~~---~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
.++|+|+|.|.+ .++... ..|.+++..+.++.+. .++|||++|||.+++|+.+++ ..|||+||+|+++
T Consensus 290 ~~aGaD~I~Vg~g~Gs~~~tr~~~--g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kal-a~GAd~V~iGs~f 366 (496)
T 4fxs_A 290 IEAGVSAVKVGIGPGSICTTRIVT--GVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAI-AAGASCVMVGSMF 366 (496)
T ss_dssp HHHTCSEEEECSSCCTTBCHHHHH--CCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTTT
T ss_pred HHhCCCEEEECCCCCcCccccccc--CCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHH-HcCCCeEEecHHH
Confidence 999999999821 111111 1245678888887764 479999999999999999999 6799999999998
Q ss_pred ccCc
Q psy7343 366 LYNP 369 (487)
Q Consensus 366 l~~P 369 (487)
+.-.
T Consensus 367 ~~t~ 370 (496)
T 4fxs_A 367 AGTE 370 (496)
T ss_dssp TTBT
T ss_pred hcCC
Confidence 8754
No 73
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.03 E-value=1.3e-09 Score=115.97 Aligned_cols=134 Identities=22% Similarity=0.252 Sum_probs=98.5
Q ss_pred cCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHH
Q psy7343 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 212 g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~ 290 (487)
|...+.+..+..+++..+|.|.||.+|+ +...+.+.++.+++.. ++||++. +. ...+.
T Consensus 225 G~~~~~~~~a~~l~~aG~d~I~id~a~g---------------~~~~~~~~v~~i~~~~p~~~Vi~g-----~v-~t~e~ 283 (490)
T 4avf_A 225 GTGADTGERVAALVAAGVDVVVVDTAHG---------------HSKGVIERVRWVKQTFPDVQVIGG-----NI-ATAEA 283 (490)
T ss_dssp CSSTTHHHHHHHHHHTTCSEEEEECSCC---------------SBHHHHHHHHHHHHHCTTSEEEEE-----EE-CSHHH
T ss_pred ccccchHHHHHHHhhcccceEEecccCC---------------cchhHHHHHHHHHHHCCCceEEEe-----ee-CcHHH
Confidence 3344444555555555689999997773 2345667788888887 7898885 22 34566
Q ss_pred HHHHHHcCCcEEEEEccc-------cCCCCCCCCCCCHHHHHHHHhhC---CCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 291 ARMLERAGCQLLAVHGRT-------VDQRGMNTGLASWEHITAVRKAL---TIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt-------~~~~g~~~g~~~~~~i~~i~~~~---~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
++.+.++|+|+|.| |-+ +... ..|.++++.+.++++.+ ++|||++|||.+.+|+.+++ ..|||+||
T Consensus 284 a~~l~~aGaD~I~v-g~g~Gs~~~t~~~~--g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal-~~GAd~V~ 359 (490)
T 4avf_A 284 AKALAEAGADAVKV-GIGPGSICTTRIVA--GVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAM-VAGAYCVM 359 (490)
T ss_dssp HHHHHHTTCSEEEE-CSSCSTTCHHHHHT--CBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHH-HHTCSEEE
T ss_pred HHHHHHcCCCEEEE-CCCCCcCCCccccC--CCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHH-HcCCCeee
Confidence 78899999999998 422 1111 13456788888887754 79999999999999999999 68999999
Q ss_pred eccccccCcc
Q psy7343 361 TAEGNLYNPA 370 (487)
Q Consensus 361 iGRa~l~~P~ 370 (487)
+|++++....
T Consensus 360 vGs~~~~~~E 369 (490)
T 4avf_A 360 MGSMFAGTEE 369 (490)
T ss_dssp ECTTTTTBTT
T ss_pred ecHHHhcCCC
Confidence 9999988643
No 74
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.03 E-value=1.2e-09 Score=103.90 Aligned_cols=105 Identities=22% Similarity=0.263 Sum_probs=77.0
Q ss_pred HHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEE--ccccCCCCCCCCCCCHHHHHHHHhhCCCc
Q psy7343 258 LLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVH--GRTVDQRGMNTGLASWEHITAVRKALTIP 334 (487)
Q Consensus 258 ~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~Vh--gRt~~~~g~~~g~~~~~~i~~i~~~~~iP 334 (487)
.+.++++.+++.+ +.++.++. .+..+ +..+++.|+|.|++. |.|....+......+++.++++++.+++|
T Consensus 105 ~~~~~i~~~~~~~~~~~v~~~~------~t~~e-~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ip 177 (223)
T 1y0e_A 105 TLDELVSYIRTHAPNVEIMADI------ATVEE-AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAK 177 (223)
T ss_dssp CHHHHHHHHHHHCTTSEEEEEC------SSHHH-HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSE
T ss_pred CHHHHHHHHHHhCCCceEEecC------CCHHH-HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCC
Confidence 4567777777765 66676654 23334 566889999999873 33332221111334678999999999999
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 335 VIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 335 Vi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
|+++|||.|.+++.+++ +.|||+|++||+++. |+.
T Consensus 178 via~GGI~~~~~~~~~~-~~Gad~v~vG~al~~-p~~ 212 (223)
T 1y0e_A 178 VIAEGNVITPDMYKRVM-DLGVHCSVVGGAITR-PKE 212 (223)
T ss_dssp EEEESSCCSHHHHHHHH-HTTCSEEEECHHHHC-HHH
T ss_pred EEEecCCCCHHHHHHHH-HcCCCEEEEChHHcC-cHH
Confidence 99999999999999999 579999999999665 654
No 75
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.98 E-value=5.2e-09 Score=100.61 Aligned_cols=148 Identities=16% Similarity=0.174 Sum_probs=104.6
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhh-hc----cC-----
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQ-AV----QV----- 272 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~-~~----~i----- 272 (487)
+.|+.+.-.-.++++..++.+ ..+|+|.++. .+..+++.+.++.+.... .+ +.
T Consensus 77 ~ipvi~~g~i~~~~~~~~~~~---~Gad~V~i~~--------------~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g 139 (253)
T 1h5y_A 77 SIPVLVGGGVRSLEDATTLFR---AGADKVSVNT--------------AAVRNPQLVALLAREFGSQSTVVAIDAKWNGE 139 (253)
T ss_dssp SSCEEEESSCCSHHHHHHHHH---HTCSEEEESH--------------HHHHCTHHHHHHHHHHCGGGEEEEEEEEECSS
T ss_pred CCCEEEECCCCCHHHHHHHHH---cCCCEEEECh--------------HHhhCcHHHHHHHHHcCCCcEEEEEEeecCCC
Confidence 578887766567766544333 2356665541 123467777776665431 11 11
Q ss_pred cEEEEeecccc--cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHH
Q psy7343 273 PVSCKIRIYQD--VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 273 PV~vKiR~~~d--~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~ 350 (487)
++.++.|.+.+ ..+..+.++.+++.|+|.|.+|+++..+. ..+ .+++.++++++.+++||+++|||.+.+|+.++
T Consensus 140 ~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~--~~~-~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~ 216 (253)
T 1h5y_A 140 YYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGT--GLG-YDVELIRRVADSVRIPVIASGGAGRVEHFYEA 216 (253)
T ss_dssp SEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTT--CSC-CCHHHHHHHHHHCSSCEEEESCCCSHHHHHHH
T ss_pred cEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCC--cCc-CCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHH
Confidence 13444443321 23678889999999999999998876443 233 47999999999999999999999999999999
Q ss_pred HHhcCCcEEEeccccccCccc
Q psy7343 351 LAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 351 l~~~Gad~VmiGRa~l~~P~l 371 (487)
+ +.|||+|++|++++.+++-
T Consensus 217 ~-~~Ga~~v~vgsal~~~~~~ 236 (253)
T 1h5y_A 217 A-AAGADAVLAASLFHFRVLS 236 (253)
T ss_dssp H-HTTCSEEEESHHHHTTSSC
T ss_pred H-HcCCcHHHHHHHHHcCCCC
Confidence 9 6899999999999887644
No 76
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.94 E-value=3.5e-09 Score=101.50 Aligned_cols=99 Identities=20% Similarity=0.277 Sum_probs=76.1
Q ss_pred HHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEE--EEEccccCCCCCCCCCCCHHHHHHHHhhCCCc
Q psy7343 258 LLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLL--AVHGRTVDQRGMNTGLASWEHITAVRKALTIP 334 (487)
Q Consensus 258 ~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I--~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iP 334 (487)
.+.++++.+++.. +.++.++. .+ .+.++.+.+.|+|.| .++|.+.... .+ ...+++.++++++. ++|
T Consensus 119 ~~~~~i~~i~~~~~~~~v~~~~------~t-~~ea~~a~~~Gad~i~~~v~g~~~~~~-~~-~~~~~~~i~~~~~~-~ip 188 (234)
T 1yxy_A 119 DIASFIRQVKEKYPNQLLMADI------ST-FDEGLVAHQAGIDFVGTTLSGYTPYSR-QE-AGPDVALIEALCKA-GIA 188 (234)
T ss_dssp CHHHHHHHHHHHCTTCEEEEEC------SS-HHHHHHHHHTTCSEEECTTTTSSTTSC-CS-SSCCHHHHHHHHHT-TCC
T ss_pred cHHHHHHHHHHhCCCCeEEEeC------CC-HHHHHHHHHcCCCEEeeeccccCCCCc-CC-CCCCHHHHHHHHhC-CCC
Confidence 4466777777765 66777664 22 344677889999999 6766643221 12 23578999999988 999
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 335 VIANGNIQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 335 Vi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
|+++|||+|.+++.+++ +.|||+|++|++++.
T Consensus 189 via~GGI~s~~~~~~~~-~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 189 VIAEGKIHSPEEAKKIN-DLGVAGIVVGGAITR 220 (234)
T ss_dssp EEEESCCCSHHHHHHHH-TTCCSEEEECHHHHC
T ss_pred EEEECCCCCHHHHHHHH-HCCCCEEEEchHHhC
Confidence 99999999999999999 689999999999876
No 77
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.93 E-value=8.2e-09 Score=101.25 Aligned_cols=192 Identities=14% Similarity=0.144 Sum_probs=119.9
Q ss_pred CCccccccccCCCchH-HHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCC-----H--HH-H
Q psy7343 148 SPRFILAPMVDASELP-WRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGND-----S--KN-L 218 (487)
Q Consensus 148 ~~~~~lApma~~td~~-fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d-----~--~~-~ 218 (487)
+.++.++||++..+.. .-....+.|++.+.+.. .+ .....+....+.|+++++.... + +. .
T Consensus 33 d~~~~l~p~~~~~~~~~~~~~~~~~g~~~i~~~~----~~------~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~ 102 (273)
T 2qjg_A 33 DHGVSNGPIKGLIDIRKTVNDVAEGGANAVLLHK----GI------VRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIV 102 (273)
T ss_dssp CHHHHHCSCTTSSSHHHHHHHHHHHTCSEEEECH----HH------HHSCCCSSSCCCEEEEECEECCTTSSSTTCCEEC
T ss_pred ccccccCCCcchhhHHHHHHHHHhcCCCEEEeCH----HH------HHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHH
Confidence 5567789998888764 22344567875533211 11 1111111223578889987433 1 11 1
Q ss_pred HHHHHhhCCcCcEE--EeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeec-c------cccccHHH
Q psy7343 219 TEAAKLAEPHCDGI--DINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRI-Y------QDVNKTVE 289 (487)
Q Consensus 219 ~~aa~~~~~~~d~I--diN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~-~------~d~~~~~e 289 (487)
.++.+.++..++.| .+|.|++. ... ..+.+.++++..+ ..++|+++..-. | .+..+..+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~--------~~~---~~~~~~~v~~~~~-~~g~~viv~~~~~G~~l~~~~~~~~~~~ 170 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDE--------DWE---AYRDLGMIAETCE-YWGMPLIAMMYPRGKHIQNERDPELVAH 170 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTT--------HHH---HHHHHHHHHHHHH-HHTCCEEEEEEECSTTCSCTTCHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEecCCCC--------HHH---HHHHHHHHHHHHH-HcCCCEEEEeCCCCcccCCCCCHhHHHH
Confidence 22223334447888 77777631 111 1234455555444 348899886421 1 12234456
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCC--HHHHHHHHH---hcCCcEEEeccc
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQC--LADVEACLA---QTGVAGVMTAEG 364 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s--~~da~~~l~---~~Gad~VmiGRa 364 (487)
+++.++++|+|.|.++. ..+++.++++++.+++||++.|||.+ .+|+.+++. +.||++|++||+
T Consensus 171 ~a~~a~~~Gad~i~~~~-----------~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 171 AARLGAELGADIVKTSY-----------TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp HHHHHHHTTCSEEEECC-----------CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred HHHHHHHcCCCEEEECC-----------CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 66889999999999841 24789999999999999999999995 888555442 589999999999
Q ss_pred cccCcccc
Q psy7343 365 NLYNPALF 372 (487)
Q Consensus 365 ~l~~P~lf 372 (487)
++..|+.+
T Consensus 240 i~~~~~~~ 247 (273)
T 2qjg_A 240 IFQHDDVV 247 (273)
T ss_dssp HHTSSSHH
T ss_pred hhCCCCHH
Confidence 99988764
No 78
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.92 E-value=5.6e-09 Score=100.14 Aligned_cols=104 Identities=15% Similarity=0.113 Sum_probs=82.0
Q ss_pred ChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEE--EccccCCCCCCCCCCCHHHHHHHHhhCC
Q psy7343 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAV--HGRTVDQRGMNTGLASWEHITAVRKALT 332 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~V--hgRt~~~~g~~~g~~~~~~i~~i~~~~~ 332 (487)
+|+.+.++++.+++. ++++.+.. ...+.++.+++.|+|.|.+ +|+|... ....++++.++++++. +
T Consensus 114 ~p~~l~~~i~~~~~~-g~~v~~~v-------~t~eea~~a~~~Gad~Ig~~~~g~t~~~---~~~~~~~~li~~l~~~-~ 181 (229)
T 3q58_A 114 RPVDIDSLLTRIRLH-GLLAMADC-------STVNEGISCHQKGIEFIGTTLSGYTGPI---TPVEPDLAMVTQLSHA-G 181 (229)
T ss_dssp CSSCHHHHHHHHHHT-TCEEEEEC-------SSHHHHHHHHHTTCSEEECTTTTSSSSC---CCSSCCHHHHHHHHTT-T
T ss_pred ChHHHHHHHHHHHHC-CCEEEEec-------CCHHHHHHHHhCCCCEEEecCccCCCCC---cCCCCCHHHHHHHHHc-C
Confidence 456677888877764 78888765 4566778889999999964 4544432 2345689999999988 9
Q ss_pred CcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccc
Q psy7343 333 IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372 (487)
Q Consensus 333 iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf 372 (487)
+|||++|||.|++|+.+++ +.|||+|++|++++ +|+.+
T Consensus 182 ipvIA~GGI~t~~d~~~~~-~~GadgV~VGsai~-~p~~~ 219 (229)
T 3q58_A 182 CRVIAEGRYNTPALAANAI-EHGAWAVTVGSAIT-RIEHI 219 (229)
T ss_dssp CCEEEESSCCSHHHHHHHH-HTTCSEEEECHHHH-CHHHH
T ss_pred CCEEEECCCCCHHHHHHHH-HcCCCEEEEchHhc-ChHHH
Confidence 9999999999999999999 67999999997766 56654
No 79
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.91 E-value=4.9e-09 Score=104.85 Aligned_cols=68 Identities=22% Similarity=0.379 Sum_probs=53.9
Q ss_pred CCCHHHHHHHHhhCCCcEE--EcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccccCCCCCcHHHHHHHHHHHHHcC
Q psy7343 318 LASWEHITAVRKALTIPVI--ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQYP 394 (487)
Q Consensus 318 ~~~~~~i~~i~~~~~iPVi--~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~~~~~~~~~~~~~l~~~~~~~ 394 (487)
...++.++++++..++||+ ++|||.|.+|+.+++ ..|||+|++||+++..++. ++.++++.+.+.+|.
T Consensus 193 ~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~-~~GadgV~vGsai~~~~~p--------~~~~~~l~~~~~~~~ 262 (305)
T 2nv1_A 193 GAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMM-QLGADGVFVGSGIFKSDNP--------AKFAKAIVEATTHFT 262 (305)
T ss_dssp TCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHH-HTTCSCEEECGGGGGSSCH--------HHHHHHHHHHHHTTT
T ss_pred cccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHH-HcCCCEEEEcHHHHcCCCH--------HHHHHHHHHHHHHhc
Confidence 3568899999998899999 999999999999999 6899999999999975432 234455555555553
No 80
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.90 E-value=3.1e-09 Score=106.54 Aligned_cols=220 Identities=13% Similarity=0.008 Sum_probs=126.7
Q ss_pred hcCCCceEEecCCCCCCHHHHHHHHHcCCCeEEccceeccccc-------------------cCcH---HHHHHhhh--C
Q psy7343 75 QLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFI-------------------ADKK---LRQEILMS--T 130 (487)
Q Consensus 75 ~~~~~~~~LAPMag~td~pFR~l~~~~Gadl~~TEMi~a~~l~-------------------~~~~---~~~~~~~~--~ 130 (487)
++ ++++++|++.--.|..+++.+.+.|+++++|+|++.+... ..+. ...+.+.. .
T Consensus 12 ~l-~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~ 90 (314)
T 2e6f_A 12 VF-ANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHD 90 (314)
T ss_dssp EE-SSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCC
T ss_pred ec-CCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhh
Confidence 44 7789999766113788999999999999999999887632 0111 11122222 2
Q ss_pred CCCCceeeeeccccCCCCCccccccccCCCchHHH---HHHHHhCCccceeccccchhhhcChhHHHHHHhc--CCCCCC
Q psy7343 131 PEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWR---LLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS--TPEDRP 205 (487)
Q Consensus 131 ~~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr---~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~--~~~~~P 205 (487)
..+.|+++|+... ....+..-...+.+.+++ .+..|++ ||.. -.+..+..+++...++++. ...+.|
T Consensus 91 ~~~~p~~~~i~g~----~~~~~~~~a~~~~~~g~d~~~~iein~~---~P~~-~g~~~~g~~~~~~~~ii~~vr~~~~~P 162 (314)
T 2e6f_A 91 YSKKPLFLSISGL----SVEENVAMVRRLAPVAQEKGVLLELNLS---CPNV-PGKPQVAYDFEAMRTYLQQVSLAYGLP 162 (314)
T ss_dssp TTTCCEEEEECCS----SHHHHHHHHHHHHHHHHHHCCEEEEECC---CCCS-TTCCCGGGSHHHHHHHHHHHHHHHCSC
T ss_pred cCCCcEEEEeCCC----CHHHHHHHHHHHHHhCCCcCceEEEEcC---CCCC-CCchhhcCCHHHHHHHHHHHHHhcCCC
Confidence 2468999997321 111111111011111222 2222333 3322 1234455566666666641 112689
Q ss_pred eeeeecc-CCHHHHHHHHHhhCCc--CcEEEeecCCCcceeec---c--------Cccc-cccCChHHHHHHHHHHhhhc
Q psy7343 206 LIIQFCG-NDSKNLTEAAKLAEPH--CDGIDINIGCPQMVAKR---G--------HYGA-YLQDDWPLLTNLVSSLRQAV 270 (487)
Q Consensus 206 v~Vqi~g-~d~~~~~~aa~~~~~~--~d~IdiN~GcP~~i~~~---g--------r~G~-~l~~d~~~i~eiv~~v~~~~ 270 (487)
|++|+.. .+.+++.++++.++++ .|+|.++.......... + ..|+ ..........+.++.+++.+
T Consensus 163 v~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~ 242 (314)
T 2e6f_A 163 FGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC 242 (314)
T ss_dssp EEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc
Confidence 9999984 4777888888877664 67777653220000000 0 0111 11111223446777788888
Q ss_pred -cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 271 -QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 271 -~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
++||++.+ ++.+..++.+.+ .+|||+|++ ||.-
T Consensus 243 ~~ipvi~~G----GI~~~~da~~~l-~~GAd~V~i-g~~~ 276 (314)
T 2e6f_A 243 PDKLVFGCG----GVYSGEDAFLHI-LAGASMVQV-GTAL 276 (314)
T ss_dssp TTSEEEEES----SCCSHHHHHHHH-HHTCSSEEE-CHHH
T ss_pred CCCCEEEEC----CCCCHHHHHHHH-HcCCCEEEE-chhh
Confidence 89999998 788889998888 579999999 8753
No 81
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.90 E-value=3e-09 Score=103.00 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=80.1
Q ss_pred EEEEeecccc--cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHH
Q psy7343 274 VSCKIRIYQD--VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACL 351 (487)
Q Consensus 274 V~vKiR~~~d--~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l 351 (487)
..+++|-+.+ ..+..++++.+++.|++.|.++....... . ...+++.++++++.+++||+++|||+|++++++++
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~--~-~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l 98 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT--K-SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF 98 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTC--S-SCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcccC--C-CcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH
Confidence 4556654332 23789999999999999999987754432 1 23578999999999999999999999999999999
Q ss_pred HhcCCcEEEeccccccCcccccC
Q psy7343 352 AQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 352 ~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
+.|||+|++||+++.||+++.+
T Consensus 99 -~~Gad~V~ig~~~l~dp~~~~~ 120 (247)
T 3tdn_A 99 -LRGADKVSINTAAVENPSLITQ 120 (247)
T ss_dssp -HTTCSEECCSHHHHHCTHHHHH
T ss_pred -HcCCCeeehhhHHhhChHHHHH
Confidence 6899999999999999998653
No 82
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.89 E-value=2.7e-08 Score=95.63 Aligned_cols=145 Identities=13% Similarity=0.168 Sum_probs=104.5
Q ss_pred CCCeeeeecc-CCHHHHHHHHHhhCC-c--CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEe
Q psy7343 203 DRPLIIQFCG-NDSKNLTEAAKLAEP-H--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI 278 (487)
Q Consensus 203 ~~Pv~Vqi~g-~d~~~~~~aa~~~~~-~--~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi 278 (487)
+..+-.+..| .+.++.+..|+++.+ . -+.| ++-+++. -..++.|+....+..+.+.+. ++.|+.-+
T Consensus 73 ~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~i--------KlEv~~d-~~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~ 142 (265)
T 1wv2_A 73 RYTILPNTAGCYDAVEAVRTCRLARELLDGHNLV--------KLEVLAD-QKTLFPNVVETLKAAEQLVKD-GFDVMVYT 142 (265)
T ss_dssp TSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEE--------EECCBSC-TTTCCBCHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred CCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeE--------EEEeecC-ccccCcCHHHHHHHHHHHHHC-CCEEEEEe
Confidence 3445556654 678888899998888 5 2222 2223332 234567777777766666543 66555211
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
.+....++++++.|++.||.+|.-. |.-.|..+++.++.+++..++|||+.|||.|++|+.+++ +.|||+
T Consensus 143 ------~dd~~~akrl~~~G~~aVmPlg~pI---GsG~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~Am-eLGAdg 212 (265)
T 1wv2_A 143 ------SDDPIIARQLAEIGCIAVMPLAGLI---GSGLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAM-ELGCEA 212 (265)
T ss_dssp ------CSCHHHHHHHHHSCCSEEEECSSST---TCCCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HHTCSE
T ss_pred ------CCCHHHHHHHHHhCCCEEEeCCccC---CCCCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-HcCCCE
Confidence 1347789999999999999977621 112355689999999999999999999999999999999 689999
Q ss_pred EEecccccc
Q psy7343 359 VMTAEGNLY 367 (487)
Q Consensus 359 VmiGRa~l~ 367 (487)
|++|+++..
T Consensus 213 VlVgSAI~~ 221 (265)
T 1wv2_A 213 VLMNTAIAH 221 (265)
T ss_dssp EEESHHHHT
T ss_pred EEEChHHhC
Confidence 999999853
No 83
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.88 E-value=2.7e-08 Score=95.62 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=81.1
Q ss_pred ChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEE--EccccCCCCCCCCCCCHHHHHHHHhhCC
Q psy7343 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAV--HGRTVDQRGMNTGLASWEHITAVRKALT 332 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~V--hgRt~~~~g~~~g~~~~~~i~~i~~~~~ 332 (487)
+|+.+.++++.+++. ++++.+.. ...+.++.+++.|+|.|.+ +|+|...+ ...++++.++++++. +
T Consensus 114 ~p~~l~~~i~~~~~~-g~~v~~~v-------~t~eea~~a~~~Gad~Ig~~~~g~t~~~~---~~~~~~~~i~~l~~~-~ 181 (232)
T 3igs_A 114 RPVAVEALLARIHHH-HLLTMADC-------SSVDDGLACQRLGADIIGTTMSGYTTPDT---PEEPDLPLVKALHDA-G 181 (232)
T ss_dssp CSSCHHHHHHHHHHT-TCEEEEEC-------CSHHHHHHHHHTTCSEEECTTTTSSSSSC---CSSCCHHHHHHHHHT-T
T ss_pred CHHHHHHHHHHHHHC-CCEEEEeC-------CCHHHHHHHHhCCCCEEEEcCccCCCCCC---CCCCCHHHHHHHHhc-C
Confidence 456777888877754 78888765 4466778889999999964 34444332 245689999999988 9
Q ss_pred CcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 333 IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 333 iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+|||++|||.|++|+.+++ +.|||+|++|++++ +|+.
T Consensus 182 ipvIA~GGI~t~~d~~~~~-~~GadgV~VGsal~-~p~~ 218 (232)
T 3igs_A 182 CRVIAEGRYNSPALAAEAI-RYGAWAVTVGSAIT-RLEH 218 (232)
T ss_dssp CCEEEESCCCSHHHHHHHH-HTTCSEEEECHHHH-CHHH
T ss_pred CcEEEECCCCCHHHHHHHH-HcCCCEEEEehHhc-CHHH
Confidence 9999999999999999999 67999999998776 4554
No 84
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.80 E-value=1.7e-08 Score=107.54 Aligned_cols=132 Identities=18% Similarity=0.206 Sum_probs=91.9
Q ss_pred HHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHH
Q psy7343 218 LTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLE 295 (487)
Q Consensus 218 ~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le 295 (487)
+.+.++.+ +..+|.|.+|.+. | ++....++++++++.+ ++||+++. ..+ .+.++.++
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~-------G--------~~~~~~e~i~~i~~~~p~~pvi~g~-----~~t-~e~a~~l~ 296 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAH-------G--------HSRRVIETLEMIKADYPDLPVVAGN-----VAT-PEGTEALI 296 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC-------C--------SSHHHHHHHHHHHHHCTTSCEEEEE-----ECS-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEecC-------C--------chHHHHHHHHHHHHHCCCceEEeCC-----cCC-HHHHHHHH
Confidence 34444444 4448888887542 1 2455667788888887 79998852 223 44568888
Q ss_pred HcCCcEEEEEcccc-----CCCCCCCCCCCHHHHHHHHhh---CCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 296 RAGCQLLAVHGRTV-----DQRGMNTGLASWEHITAVRKA---LTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 296 ~~G~d~I~VhgRt~-----~~~g~~~g~~~~~~i~~i~~~---~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
++|+|+|.+.+... .... ..+.+.++.+.++++. .++|||++|||.+++|+.+++ ..|||+|++||+++.
T Consensus 297 ~~G~d~I~v~~~~G~~~~~~~~~-~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kal-a~GAd~V~iGr~~l~ 374 (494)
T 1vrd_A 297 KAGADAVKVGVGPGSICTTRVVA-GVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKAL-AAGAESVMVGSIFAG 374 (494)
T ss_dssp HTTCSEEEECSSCSTTCHHHHHH-CCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHT
T ss_pred HcCCCEEEEcCCCCccccccccC-CCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECHHHhc
Confidence 99999999933211 0000 1134556666665544 689999999999999999999 689999999999999
Q ss_pred Ccccc
Q psy7343 368 NPALF 372 (487)
Q Consensus 368 ~P~lf 372 (487)
+|..-
T Consensus 375 ~~e~~ 379 (494)
T 1vrd_A 375 TEEAP 379 (494)
T ss_dssp BTTSS
T ss_pred CCcCC
Confidence 88763
No 85
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.79 E-value=3.6e-08 Score=105.26 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=97.1
Q ss_pred CeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccc
Q psy7343 205 PLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQD 283 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d 283 (487)
++.+.+.. ..+.+..+..+++...|.|.|+..+| +...+.++++++++.. ++||+++ +
T Consensus 246 ~V~aavg~-~~d~~era~aLveaGvd~I~Id~a~g---------------~~~~v~~~i~~i~~~~~~~~vi~g-----~ 304 (511)
T 3usb_A 246 LVGAAVGV-TADAMTRIDALVKASVDAIVLDTAHG---------------HSQGVIDKVKEVRAKYPSLNIIAG-----N 304 (511)
T ss_dssp CCEEEECS-STTHHHHHHHHHHTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTSEEEEE-----E
T ss_pred eeeeeeee-ccchHHHHHHHHhhccceEEeccccc---------------chhhhhhHHHHHHHhCCCceEEee-----e
Confidence 34444432 23344444455555688898886653 2445667788888876 4788875 2
Q ss_pred cccHHHHHHHHHHcCCcEEEEEccccC-------CCCCCCCCCCHHHHHHHHh---hCCCcEEEcCCCCCHHHHHHHHHh
Q psy7343 284 VNKTVEYARMLERAGCQLLAVHGRTVD-------QRGMNTGLASWEHITAVRK---ALTIPVIANGNIQCLADVEACLAQ 353 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~VhgRt~~-------~~g~~~g~~~~~~i~~i~~---~~~iPVi~nGgI~s~~da~~~l~~ 353 (487)
+ ...+.++.+.++|+|+|.+ |.+.. .. ..|.+.+..+.++++ ..++|||++|||.+++|+.+++ .
T Consensus 305 v-~t~e~a~~~~~aGad~i~v-g~g~gsi~~~~~~~--g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal-a 379 (511)
T 3usb_A 305 V-ATAEATKALIEAGANVVKV-GIGPGSICTTRVVA--GVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKAL-A 379 (511)
T ss_dssp E-CSHHHHHHHHHHTCSEEEE-CSSCSTTCCHHHHH--CCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH-H
T ss_pred e-ccHHHHHHHHHhCCCEEEE-CCCCcccccccccc--CCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHH-H
Confidence 3 3456688899999999998 43221 11 124566777766644 4579999999999999999999 6
Q ss_pred cCCcEEEeccccccCcc
Q psy7343 354 TGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 354 ~Gad~VmiGRa~l~~P~ 370 (487)
.|||+||+|++++.-..
T Consensus 380 ~GA~~V~vGs~~~~~~e 396 (511)
T 3usb_A 380 AGAHVVMLGSMFAGVAE 396 (511)
T ss_dssp TTCSEEEESTTTTTBTT
T ss_pred hCchhheecHHHhcCcc
Confidence 89999999999876643
No 86
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=98.77 E-value=5.6e-08 Score=100.18 Aligned_cols=141 Identities=15% Similarity=0.153 Sum_probs=114.2
Q ss_pred CeeeeeccCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeeccc
Q psy7343 205 PLIIQFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQ 282 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~ 282 (487)
|+...+.+.+++++.+.++.+.+ .|+.|+|++|+ +++...++++++++++ ++++.+...-++
T Consensus 138 ~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~~~ 201 (384)
T 2pgw_A 138 GYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANEGW 201 (384)
T ss_dssp EBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTTCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCCCC
Confidence 44433445688888887776554 49999999875 4667778899999988 578888776677
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
+.++..++++.++++|++.|. + + + ...+|+..+++++.+++||++++.+.+.++++++++...||.|++.
T Consensus 202 ~~~~a~~~~~~l~~~~i~~iE-------q-P-~-~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik 271 (384)
T 2pgw_A 202 SVHDAINMCRKLEKYDIEFIE-------Q-P-T-VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIG 271 (384)
T ss_dssp CHHHHHHHHHHHGGGCCSEEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEe-------C-C-C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEc
Confidence 888889999999999999875 2 1 2 3468999999999999999999999999999999988889999998
Q ss_pred cccccCccc
Q psy7343 363 EGNLYNPAL 371 (487)
Q Consensus 363 Ra~l~~P~l 371 (487)
.+.++.++-
T Consensus 272 ~~~~GGit~ 280 (384)
T 2pgw_A 272 PREIGGIQP 280 (384)
T ss_dssp HHHHTSHHH
T ss_pred chhhCCHHH
Confidence 887777554
No 87
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=98.73 E-value=2.7e-09 Score=109.43 Aligned_cols=198 Identities=16% Similarity=0.202 Sum_probs=104.1
Q ss_pred CCceEEecCC--CCC----CHHHHHHHHHcCCCeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCcc
Q psy7343 78 SPRFILAPMV--DAS----ELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRF 151 (487)
Q Consensus 78 ~~~~~LAPMa--g~t----d~pFR~l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~ 151 (487)
+.|+++|||+ |++ +.+|++.|+++|+..++|+|.+ .++- . ..... .+.|+.+|+... .+...
T Consensus 80 ~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s-~~le----~---v~~~~-~~~~~~~QLy~~---~d~~~ 147 (368)
T 2nli_A 80 KAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSG-ATFE----E---ISEGL-NGGPRWFQIYMA---KDDQQ 147 (368)
T ss_dssp SSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCS-SCHH----H---HHHHH-TTCCEEEEECCB---SSHHH
T ss_pred CCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHh-HHHH----H---HHHhC-CCCCEEEEEecc---CCHHH
Confidence 5689999999 888 4899999999999999999987 3331 1 11111 367899997432 11111
Q ss_pred cc-----ccccCC------CchHH---HHHHHHhCCcccee-ccc--------cchhh---h--cChhHHHHHHh--cCC
Q psy7343 152 IL-----APMVDA------SELPW---RLLSRRYGSHLCYT-PMV--------SAHQF---I--ADKKLRQEILM--STP 201 (487)
Q Consensus 152 ~l-----Apma~~------td~~f---r~i~~~~Ga~l~~t-~~v--------~~~~L---l--~~~~~~~~~l~--~~~ 201 (487)
.. +-.+++ .|.+. |..+...|..+-.+ +.+ .++.+ + .++....+.++ ...
T Consensus 148 ~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~ 227 (368)
T 2nli_A 148 NRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGH 227 (368)
T ss_dssp HHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHH
Confidence 00 000010 01111 00000000000000 000 11221 1 13322222232 112
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeec
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRI 280 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~ 280 (487)
.+.||++|.. .++ +.++.++++ +|+|.++.+- - +... .....++.+.++.+++.. ++||++.+
T Consensus 228 ~~~PvivK~v-~~~----e~a~~a~~~Gad~I~vs~~g-g---r~~~---~g~~~~~~l~~v~~~v~~--~ipVia~G-- 291 (368)
T 2nli_A 228 SGLPVFVKGI-QHP----EDADMAIKRGASGIWVSNHG-A---RQLY---EAPGSFDTLPAIAERVNK--RVPIVFDS-- 291 (368)
T ss_dssp SSSCEEEEEE-CSH----HHHHHHHHTTCSEEEECCGG-G---TSCS---SCCCHHHHHHHHHHHHTT--SSCEEECS--
T ss_pred cCCCEEEEcC-CCH----HHHHHHHHcCCCEEEEcCCC-c---CCCC---CCCChHHHHHHHHHHhCC--CCeEEEEC--
Confidence 3689999953 233 334555555 7888774210 0 0000 112345666665554432 69999997
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
++.+..++++.+. .|+|+|+| ||
T Consensus 292 --GI~~g~D~~kala-lGAd~V~i-Gr 314 (368)
T 2nli_A 292 --GVRRGEHVAKALA-SGADVVAL-GR 314 (368)
T ss_dssp --SCCSHHHHHHHHH-TTCSEEEE-CH
T ss_pred --CCCCHHHHHHHHH-cCCCEEEE-CH
Confidence 8889999999988 89999999 77
No 88
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.71 E-value=2.2e-08 Score=101.26 Aligned_cols=214 Identities=11% Similarity=0.041 Sum_probs=127.4
Q ss_pred CCceEEecCCCCCCHH-HHHHHHHcCCCeEEccceecccccc------------------------CcHHHHHHhhhCCC
Q psy7343 78 SPRFILAPMVDASELP-WRLLSRRYGSHLCYTPMVSAHQFIA------------------------DKKLRQEILMSTPE 132 (487)
Q Consensus 78 ~~~~~LAPMag~td~p-FR~l~~~~Gadl~~TEMi~a~~l~~------------------------~~~~~~~~~~~~~~ 132 (487)
++++++|+ |+++.+ |++.+.+.|+++++|++++.+.... +.....+.+.....
T Consensus 55 ~npi~~aa--g~~~~~~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~~~~~~~~~~~ 132 (336)
T 1f76_A 55 KNPLGLAA--GLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDNLVENVKKAHY 132 (336)
T ss_dssp SSSEEECT--TSSTTCCCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHHHHHHHHHCCC
T ss_pred CCCcEeCc--ccCCcHHHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHHHHHHHHhccc
Confidence 67899995 566665 8889999999999999998763210 01122222333333
Q ss_pred CCceeeeeccccCCCCCccccccccCCCchHHHHHHHHh--CCccc----eeccccchhhhcChhHHHHHHhc----C--
Q psy7343 133 DRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRY--GSHLC----YTPMVSAHQFIADKKLRQEILMS----T-- 200 (487)
Q Consensus 133 e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~--Ga~l~----~t~~v~~~~Ll~~~~~~~~~l~~----~-- 200 (487)
+.|+++|+... .. .|.... -..|....+.. |+|.. .+|...+...+++++...++++. .
T Consensus 133 ~~~~~v~i~~~----~~----~~i~~~-~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~ 203 (336)
T 1f76_A 133 DGVLGINIGKN----KD----TPVEQG-KDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQND 203 (336)
T ss_dssp CSEEEEEECCC----TT----SCGGGT-HHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC----CC----Cccccc-HHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHh
Confidence 56899997322 10 121111 11233322221 44431 12332334455666666666541 1
Q ss_pred -----CCCCCeeeeecc-CCHHHHHHHHHhhCCc-CcEEEeecCCCcce-ee----ccCccc-cccCChHHHHHHHHHHh
Q psy7343 201 -----PEDRPLIIQFCG-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMV-AK----RGHYGA-YLQDDWPLLTNLVSSLR 267 (487)
Q Consensus 201 -----~~~~Pv~Vqi~g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i-~~----~gr~G~-~l~~d~~~i~eiv~~v~ 267 (487)
..+.||+||+.. .+.++..++++.+++. .|+|.+..+..... .. ...+|+ .....+....+.++.++
T Consensus 204 ~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~ 283 (336)
T 1f76_A 204 LQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLS 283 (336)
T ss_dssp HHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHH
T ss_pred hhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHH
Confidence 236899999984 5667888889888776 89999864321100 00 000111 11112334456677777
Q ss_pred hhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 268 QAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 268 ~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
+.+ ++||++.+ ++.+..++.+.++ +|||+|++ ||.
T Consensus 284 ~~~~~~ipVi~~G----GI~~~~da~~~l~-~GAd~V~i-gr~ 320 (336)
T 1f76_A 284 LELNGRLPIIGVG----GIDSVIAAREKIA-AGASLVQI-YSG 320 (336)
T ss_dssp HHHTTSSCEEEES----SCCSHHHHHHHHH-HTCSEEEE-SHH
T ss_pred HHhCCCCCEEEEC----CCCCHHHHHHHHH-CCCCEEEe-eHH
Confidence 777 89999998 7778899988887 69999999 774
No 89
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.69 E-value=8.6e-09 Score=106.46 Aligned_cols=194 Identities=17% Similarity=0.169 Sum_probs=106.2
Q ss_pred CCceEEecCCCCCCHH-------HHHHHHHcCCCeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCc
Q psy7343 78 SPRFILAPMVDASELP-------WRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPR 150 (487)
Q Consensus 78 ~~~~~LAPMag~td~p-------FR~l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~ 150 (487)
+.|+++||| |+++++ |++.|+++|+..++|+|.+ .++- ..... ..+.|+.+|+.... +..
T Consensus 94 ~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s-~~le-------~v~~~-~~~~~~~~QLy~~~---d~~ 160 (392)
T 2nzl_A 94 SMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWAT-SSIE-------EVAEA-GPEALRWLQLYIYK---DRE 160 (392)
T ss_dssp SSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCS-SCHH-------HHHHH-CTTSEEEEEECCBS---SHH
T ss_pred CCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHH-HHHH-------HHHHh-cCCCcEEEEEEecC---CHH
Confidence 568999999 999987 9999999999999999986 3331 11112 24678999974321 111
Q ss_pred ccc-----ccccCCC------ch---HHHHHHHHhCCccce--------------ecc---ccch---hhhc---ChhHH
Q psy7343 151 FIL-----APMVDAS------EL---PWRLLSRRYGSHLCY--------------TPM---VSAH---QFIA---DKKLR 193 (487)
Q Consensus 151 ~~l-----Apma~~t------d~---~fr~i~~~~Ga~l~~--------------t~~---v~~~---~Ll~---~~~~~ 193 (487)
... +-.+++. |. +.|..+...|..+-+ .|+ ..++ +++. +++..
T Consensus 161 ~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~ 240 (392)
T 2nzl_A 161 VTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSIS 240 (392)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCC
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHH
Confidence 000 0001110 10 112222222211000 000 0011 2222 44433
Q ss_pred HHHHh--cCCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccc---cCChHHHHHHHHHHh
Q psy7343 194 QEILM--STPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYL---QDDWPLLTNLVSSLR 267 (487)
Q Consensus 194 ~~~l~--~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l---~~d~~~i~eiv~~v~ 267 (487)
.+.++ ....+.||++|.. .+++ .|+.++++ +|+|.+. ++.|.++ ...++.+.++.+++.
T Consensus 241 ~~~i~~lr~~~~~PvivKgv-~~~e----~A~~a~~aGad~I~vs----------~~ggr~~~~g~~~~~~l~~v~~av~ 305 (392)
T 2nzl_A 241 WEDIKWLRRLTSLPIVAKGI-LRGD----DAREAVKHGLNGILVS----------NHGARQLDGVPATIDVLPEIVEAVE 305 (392)
T ss_dssp HHHHHHHC--CCSCEEEEEE-CCHH----HHHHHHHTTCCEEEEC----------CGGGTSSTTCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCEEEEec-CCHH----HHHHHHHcCCCEEEeC----------CCCCCcCCCCcChHHHHHHHHHHcC
Confidence 33343 2234689999954 2333 34555554 7777763 1111111 234566666555443
Q ss_pred hhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 268 QAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 268 ~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
. ++||++.+ ++.+..|+++.+. .|||+|+| ||
T Consensus 306 ~--~ipVia~G----GI~~g~Dv~kala-lGAd~V~i-Gr 337 (392)
T 2nzl_A 306 G--KVEVFLDG----GVRKGTDVLKALA-LGAKAVFV-GR 337 (392)
T ss_dssp T--SSEEEECS----SCCSHHHHHHHHH-TTCSEEEE-CH
T ss_pred C--CCEEEEEC----CCCCHHHHHHHHH-hCCCeeEE-CH
Confidence 2 58999997 8889999999988 89999999 87
No 90
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=98.69 E-value=4.6e-08 Score=99.23 Aligned_cols=217 Identities=12% Similarity=0.083 Sum_probs=125.9
Q ss_pred hhcCCCceEEecCCCC--CCHHHHHHHHHcCCCeEEccceecccc---------------cc----Cc---HHHHHHhh-
Q psy7343 74 TQLGSPRFILAPMVDA--SELPWRLLSRRYGSHLCYTPMVSAHQF---------------IA----DK---KLRQEILM- 128 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~--td~pFR~l~~~~Gadl~~TEMi~a~~l---------------~~----~~---~~~~~~~~- 128 (487)
.++ ++++++| +|. .+..+...+.+.|++.+.|..+..+.. ++ .+ +.-.+.+.
T Consensus 45 l~~-~NPv~lA--aG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~ 121 (345)
T 3oix_A 45 FDF-DNCLMNA--AGVYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDYVTE 121 (345)
T ss_dssp EEE-SCSEEEC--TTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHHHHH
T ss_pred EEC-CCCCEEc--CCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHHHHH
Confidence 344 7789999 676 366888888888988877777655421 11 01 11111111
Q ss_pred --hCCCCCceeeeeccccCCCCCccccccccCCCchHHH-HHHHHhCCccceeccccchhhhcChhHHHHHHhc--CCCC
Q psy7343 129 --STPEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWR-LLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS--TPED 203 (487)
Q Consensus 129 --~~~~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr-~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~--~~~~ 203 (487)
....+.|+++|+.+. +...+..-...+.+.++. .+..|+| ||... .+..|.++++.+.++++. ...+
T Consensus 122 ~~~~~~~~pvivsI~g~----~~~d~~~~a~~l~~~g~~d~ielNis---CPn~~-G~~~l~~~~e~l~~il~av~~~~~ 193 (345)
T 3oix_A 122 LQKQPDSKNHFLSLVGM----SPEETHTILXMVEASKYQGLVELNLS---CPNVP-GXPQIAYDFETTDQILSEVFTYFT 193 (345)
T ss_dssp HHHSTTCCCCEEEECCS----SHHHHHHHHHHHHHSSCCSEEEEECS---CCCST-TCCCGGGCHHHHHHHHHHHTTTCC
T ss_pred HhhccCCCCEEEEecCC----CHHHHHHHHHHHhccCCCcEEEEecC---CCCcC-CchhhcCCHHHHHHHHHHHHHHhC
Confidence 133578999997421 211111100000000011 1222344 55443 345677898888888863 3447
Q ss_pred CCeeeeecc-CCHHHHHHHHHhhCCc-CcEEE----------eecCCCcceeeccCccc-cccCChHHHHHHHHHHhhhc
Q psy7343 204 RPLIIQFCG-NDSKNLTEAAKLAEPH-CDGID----------INIGCPQMVAKRGHYGA-YLQDDWPLLTNLVSSLRQAV 270 (487)
Q Consensus 204 ~Pv~Vqi~g-~d~~~~~~aa~~~~~~-~d~Id----------iN~GcP~~i~~~gr~G~-~l~~d~~~i~eiv~~v~~~~ 270 (487)
.||+|||+. .+..+++++++.+... .+.|+ |+..-|.. .....+|+ .....++...+++..+++.+
T Consensus 194 ~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~-~~~~~~gGlSG~ai~p~a~~~v~~i~~~~ 272 (345)
T 3oix_A 194 KPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVI-XPKNGFGGIGGDYVKPTALANVHAFYKRL 272 (345)
T ss_dssp SCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESC-SGGGGEEEEEEGGGHHHHHHHHHHHHTTS
T ss_pred CCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCcccc-ccccccCCcCCccccHHHHHHHHHHHHHc
Confidence 899999994 4666777776665443 44433 32111110 00111121 12344556677888899888
Q ss_pred --cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 271 --QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 271 --~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
++||++.+ ++.+..++.+.+. +|||+|+| ||.
T Consensus 273 ~~~ipIIg~G----GI~s~~da~~~l~-aGAd~V~i-gra 306 (345)
T 3oix_A 273 NPSIQIIGTG----GVXTGRDAFEHIL-CGASMVQI-GTA 306 (345)
T ss_dssp CTTSEEEEES----SCCSHHHHHHHHH-HTCSEEEE-SHH
T ss_pred CCCCcEEEEC----CCCChHHHHHHHH-hCCCEEEE-ChH
Confidence 69999998 8889999998885 89999999 885
No 91
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.65 E-value=2.1e-08 Score=96.58 Aligned_cols=96 Identities=15% Similarity=0.163 Sum_probs=78.5
Q ss_pred EEEEeecccc------cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHH
Q psy7343 274 VSCKIRIYQD------VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADV 347 (487)
Q Consensus 274 V~vKiR~~~d------~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da 347 (487)
..+|+|.|+. ..+..++++.+++.|+|.|.++.++.... . ...+++.+++++ .+++||+++|||++.+++
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~~~--~-~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~ 88 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIE--N-SGENLPVLEKLS-EFAEHIQIGGGIRSLDYA 88 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHHHH--C-CCTTHHHHHHGG-GGGGGEEEESSCCSHHHH
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEeccccccc--C-CchhHHHHHHHH-hcCCcEEEECCCCCHHHH
Confidence 4556655542 24789999999999999999988655322 1 235789999999 889999999999999999
Q ss_pred HHHHHhcCCcEEEeccccccCcccccC
Q psy7343 348 EACLAQTGVAGVMTAEGNLYNPALFTG 374 (487)
Q Consensus 348 ~~~l~~~Gad~VmiGRa~l~~P~lf~~ 374 (487)
.+++ +.|||+|++|++++.||+++.+
T Consensus 89 ~~~~-~~Gad~V~lg~~~l~~p~~~~~ 114 (241)
T 1qo2_A 89 EKLR-KLGYRRQIVSSKVLEDPSFLKS 114 (241)
T ss_dssp HHHH-HTTCCEEEECHHHHHCTTHHHH
T ss_pred HHHH-HCCCCEEEECchHhhChHHHHH
Confidence 9999 5899999999999999997643
No 92
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=98.65 E-value=1.8e-07 Score=95.05 Aligned_cols=195 Identities=13% Similarity=0.148 Sum_probs=106.4
Q ss_pred CCceEEecCCCCC-------CHHHHHHHHHcCCCeEEccceeccccccCc--HHHHHHhhhCCCCCceeeeeccccCCCC
Q psy7343 78 SPRFILAPMVDAS-------ELPWRLLSRRYGSHLCYTPMVSAHQFIADK--KLRQEILMSTPEDRPLIIQRTIFPRLGS 148 (487)
Q Consensus 78 ~~~~~LAPMag~t-------d~pFR~l~~~~Gadl~~TEMi~a~~l~~~~--~~~~~~~~~~~~e~p~~vQl~~~~~~g~ 148 (487)
++++++|||+|++ +.+|++.|+++|+.+++++|.+. + ... ....+.+.....+.|+++|+... .+
T Consensus 55 ~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~--l-~~~~~~~~~~~~~~~~~~~pv~~~i~~~---~~ 128 (349)
T 1p0k_A 55 SSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA--L-KDPSERLSYEIVRKENPNGLIFANLGSE---AT 128 (349)
T ss_dssp SCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT--T-TCHHHHHHHHHHHHHCSSSCEEEEEETT---CC
T ss_pred CCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc--c-cCcccccceehhhhhCCCceeEEeecCC---CC
Confidence 6789999999999 99999999999999999998765 2 221 12222333234567898886310 01
Q ss_pred CccccccccCCCchHHHHHHHHhCCcc------ceeccccchhhhcChhH--HHHHHh--cCCCCCCeeeeec--cCCHH
Q psy7343 149 PRFILAPMVDASELPWRLLSRRYGSHL------CYTPMVSAHQFIADKKL--RQEILM--STPEDRPLIIQFC--GNDSK 216 (487)
Q Consensus 149 ~~~~lApma~~td~~fr~i~~~~Ga~l------~~t~~v~~~~Ll~~~~~--~~~~l~--~~~~~~Pv~Vqi~--g~d~~ 216 (487)
.+ .+..+....|++. |+.+.+... .++.. ..+.++ ....+.||++|+. +.+++
T Consensus 129 ~~------------~~~~~~~~~gad~i~i~~~~~~~~~~~~---~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~ 193 (349)
T 1p0k_A 129 AA------------QAKEAVEMIGANALQIHLNVIQEIVMPE---GDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKA 193 (349)
T ss_dssp HH------------HHHHHHHHTTCSEEEEEECTTTTC-----------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHH
T ss_pred HH------------HHHHHHHhcCCCeEEecccchhhhcCCC---CCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHH
Confidence 11 1223333445543 111111110 01111 222222 1123689999974 34543
Q ss_pred HHHHHHHhhCCc-CcEEEe--ecCCCcc---eeecc-Cc---cccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccc
Q psy7343 217 NLTEAAKLAEPH-CDGIDI--NIGCPQM---VAKRG-HY---GAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVN 285 (487)
Q Consensus 217 ~~~~aa~~~~~~-~d~Idi--N~GcP~~---i~~~g-r~---G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~ 285 (487)
. ++.++++ +|+|.+ +.|.+.. ..+.. .. .......++.+.++ ++.+ ++||++.+ ++.
T Consensus 194 ~----a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v----~~~~~~ipvia~G----GI~ 261 (349)
T 1p0k_A 194 S----AGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEI----RSEFPASTMIASG----GLQ 261 (349)
T ss_dssp H----HHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHH----HHHCTTSEEEEES----SCC
T ss_pred H----HHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHH----HHhcCCCeEEEEC----CCC
Confidence 3 4444444 888887 3332110 00100 00 00112345555554 3444 79999997 888
Q ss_pred cHHHHHHHHHHcCCcEEEEEcc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgR 307 (487)
+..++.+.+. .|+|+|+| ||
T Consensus 262 ~~~d~~k~l~-~GAd~V~i-G~ 281 (349)
T 1p0k_A 262 DALDVAKAIA-LGASCTGM-AG 281 (349)
T ss_dssp SHHHHHHHHH-TTCSEEEE-CH
T ss_pred CHHHHHHHHH-cCCCEEEE-cH
Confidence 8999998886 69999999 77
No 93
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.65 E-value=2.5e-07 Score=112.22 Aligned_cols=194 Identities=11% Similarity=0.134 Sum_probs=122.5
Q ss_pred CCCCcccccccc-CCCchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHh----cCCCCCCeeeeeccCCHHH--
Q psy7343 146 LGSPRFILAPMV-DASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILM----STPEDRPLIIQFCGNDSKN-- 217 (487)
Q Consensus 146 ~g~~~~~lApma-~~td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~d~~~-- 217 (487)
+++.|++.+||. ++++..+-....|.|. +. +.+... .+++...+.++ ..+.+.|+++++...+++.
T Consensus 580 lg~~PIi~a~M~~~vs~~~LaaAva~aGglG~-----i~g~g~-~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~ 653 (2060)
T 2uva_G 580 LGVPPVMVAGMTPTTVPWDFVAATMNAGYHIE-----LAGGGY-YNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMG 653 (2060)
T ss_dssp HTSCSEEECCCTTTTCSHHHHHHHHHTTCEEC-----EEGGGC-CSHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHH
T ss_pred cccceEEecCCCCccccHHHHHHHHHCCCEEE-----ECcCCC-CCHHHHHHHHHHHHhhcccCCCeEecccccCcccch
Confidence 467899999999 5778777766666663 33 222221 22333333332 2223689999987534331
Q ss_pred -HHHHHHhhCCc-CcE--EEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHH
Q psy7343 218 -LTEAAKLAEPH-CDG--IDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARM 293 (487)
Q Consensus 218 -~~~aa~~~~~~-~d~--IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~ 293 (487)
+.+..+.+.+. .+. |.+..|.| ..+.+.++++ + .+++++..+ .+..+..+.+..
T Consensus 654 ~~~~~~~~~~~~gv~i~gv~~~~G~p---------------~~e~~~~~l~---~-~gi~~i~~v---~~~~~a~~~v~~ 711 (2060)
T 2uva_G 654 WQIPLLGRLRADGVPIEGLTIGAGVP---------------SIEVANEYIQ---T-LGIRHISFK---PGSVDAIQQVIN 711 (2060)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEESSCC---------------CHHHHHHHHH---H-SCCSEEEEC---CCSHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCcceEeecCCCC---------------CHHHHHHHHH---H-cCCeEEEec---CCHHHHHHHHHH
Confidence 33455544444 333 44444433 2333334333 2 378887543 234456666667
Q ss_pred HHHcCCcEEE---EEccccCCCCCCCCC-----CCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHH----------HhcC
Q psy7343 294 LERAGCQLLA---VHGRTVDQRGMNTGL-----ASWEHITAVRKALTIPVIANGNIQCLADVEACL----------AQTG 355 (487)
Q Consensus 294 le~~G~d~I~---VhgRt~~~~g~~~g~-----~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l----------~~~G 355 (487)
+.++|+|+|+ +.|.. .|+..|. ...+.+.+|++.+++|||+.|||.+.+++.+++ ...|
T Consensus 712 l~~aG~D~iV~~q~~G~e---aGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aaltg~ws~~~g~palG 788 (2060)
T 2uva_G 712 IAKANPTFPIILQWTGGR---GGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMP 788 (2060)
T ss_dssp HHHHCTTSCEEEEECCTT---SSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCC
T ss_pred HHHcCCCEEEEeeeEccc---CCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCC
Confidence 7899999998 54421 2233332 235788999999999999999999999999999 1379
Q ss_pred CcEEEeccccccCcc
Q psy7343 356 VAGVMTAEGNLYNPA 370 (487)
Q Consensus 356 ad~VmiGRa~l~~P~ 370 (487)
||+|++|+.++.-..
T Consensus 789 AdgV~~GT~f~~t~E 803 (2060)
T 2uva_G 789 FDGCMFGSRMMTAKE 803 (2060)
T ss_dssp CSCEEESGGGGGBTT
T ss_pred CCEEEEchhhhcCcC
Confidence 999999999988754
No 94
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=98.63 E-value=2.6e-07 Score=91.55 Aligned_cols=152 Identities=13% Similarity=0.135 Sum_probs=107.2
Q ss_pred CCCeeeee---ccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEe
Q psy7343 203 DRPLIIQF---CGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI 278 (487)
Q Consensus 203 ~~Pv~Vqi---~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi 278 (487)
+.||++.+ +|.++++..+.++.++++ +++|.|+-++-.+...|.. |..+....+.+.+|..++....+.++.++.
T Consensus 78 ~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~-gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~a 156 (295)
T 1xg4_A 78 SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRP-NKAIVSKEEMVDRIRAAVDAKTDPDFVIMA 156 (295)
T ss_dssp CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSS-SCCBCCHHHHHHHHHHHHHHCSSTTSEEEE
T ss_pred CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCC-CCccCCHHHHHHHHHHHHHhccCCCcEEEE
Confidence 47999998 455888988888877666 8999999988323333332 344554444555544444434467788888
Q ss_pred eccc----ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCC--CCHHHHHHHHH
Q psy7343 279 RIYQ----DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNI--QCLADVEACLA 352 (487)
Q Consensus 279 R~~~----d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI--~s~~da~~~l~ 352 (487)
|... +.++..+-++.++++|+|.|.+++. .+++.++++.+.+++|+++|... .++..-.+-|+
T Consensus 157 Rtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~ 225 (295)
T 1xg4_A 157 RTDALAVEGLDAAIERAQAYVEAGAEMLFPEAI-----------TELAMYRQFADAVQVPILANITEFGATPLFTTDELR 225 (295)
T ss_dssp EECCHHHHCHHHHHHHHHHHHHTTCSEEEETTC-----------CSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHH
T ss_pred ecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCC-----------CCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHH
Confidence 8642 2357788889999999999999654 36788999999999999998765 23332223444
Q ss_pred hcCCcEEEeccccc
Q psy7343 353 QTGVAGVMTAEGNL 366 (487)
Q Consensus 353 ~~Gad~VmiGRa~l 366 (487)
+.|++.|++|.+++
T Consensus 226 ~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 226 SAHVAMALYPLSAF 239 (295)
T ss_dssp HTTCSEEEESSHHH
T ss_pred HcCCCEEEEChHHH
Confidence 79999999998654
No 95
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=98.59 E-value=4.3e-07 Score=92.57 Aligned_cols=140 Identities=18% Similarity=0.153 Sum_probs=109.8
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
..|+...+...+++++.+.++.+.+ .|+.|+|++||+ +++...++++++++++ ++++.++..
T Consensus 133 ~vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CeeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3455444322577888877765544 599999998872 4566678888898887 688888887
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+++.++..++++.++++|++.|- + + + ...+|+..+++++.+++||++++.+.|.++++++++..++|.|
T Consensus 198 ~~~~~~~a~~~~~~l~~~~i~~iE-------~-P-~-~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v 267 (359)
T 1mdl_A 198 QSLDVPAAIKRSQALQQEGVTWIE-------E-P-T-LQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLA 267 (359)
T ss_dssp TCSCHHHHHHHHHHHHHHTCSCEE-------C-C-S-CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCeEE-------C-C-C-ChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 778888889999999999999873 2 1 2 3458999999999999999999999999999999988889999
Q ss_pred Eecccccc
Q psy7343 360 MTAEGNLY 367 (487)
Q Consensus 360 miGRa~l~ 367 (487)
++-.+.++
T Consensus 268 ~ik~~~~G 275 (359)
T 1mdl_A 268 MPDAMKIG 275 (359)
T ss_dssp CCBTTTTT
T ss_pred eecchhhC
Confidence 88654443
No 96
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.58 E-value=2.2e-08 Score=99.91 Aligned_cols=209 Identities=16% Similarity=0.133 Sum_probs=116.0
Q ss_pred hhcCCCceEEec-CCCCCCHHHHHHHHHcCCCeEE---------------------ccceeccccccCcHHHH-H----H
Q psy7343 74 TQLGSPRFILAP-MVDASELPWRLLSRRYGSHLCY---------------------TPMVSAHQFIADKKLRQ-E----I 126 (487)
Q Consensus 74 ~~~~~~~~~LAP-Mag~td~pFR~l~~~~Gadl~~---------------------TEMi~a~~l~~~~~~~~-~----~ 126 (487)
.++ ++++++|| |.+.++ +|+..+.+.|++.+. ++|+++.++.+...... + .
T Consensus 14 ~~l-~npi~~aag~~~~~~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~~~~~~~~~~~~~ 91 (311)
T 1ep3_A 14 LDL-KNPIIPASGCFGFGE-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMTEKLPW 91 (311)
T ss_dssp EEE-SSSEEECTTSSTTST-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBCCHHHHHHTHHHH
T ss_pred EEC-CCCcEECCCCCCCCH-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCcCHHHHHHHHHHH
Confidence 344 77899999 999886 577665444444444 45677777655442221 1 1
Q ss_pred hhhCCCCCceeeeeccccCCCCCccccccccCCCchHHHHH---HHH-hCCcc------ceeccccchhhhcChhHHHHH
Q psy7343 127 LMSTPEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLL---SRR-YGSHL------CYTPMVSAHQFIADKKLRQEI 196 (487)
Q Consensus 127 ~~~~~~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i---~~~-~Ga~l------~~t~~v~~~~Ll~~~~~~~~~ 196 (487)
+.....+.|+++|+... +.. .|... ..+ .|++. |+...-.+..+..+++...++
T Consensus 92 ~~~~~~~~p~~v~l~~~----~~~------------~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~ei 155 (311)
T 1ep3_A 92 LNENFPELPIIANVAGS----EEA------------DYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAAL 155 (311)
T ss_dssp HHHHCTTSCEEEEECCS----SHH------------HHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHH
T ss_pred HHhcCCCCcEEEEEcCC----CHH------------HHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHH
Confidence 22112268999997321 111 12211 122 34332 222111123445566666666
Q ss_pred Hhc--CCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccC---------ccc-cccCChHHHHHHH
Q psy7343 197 LMS--TPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGH---------YGA-YLQDDWPLLTNLV 263 (487)
Q Consensus 197 l~~--~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr---------~G~-~l~~d~~~i~eiv 263 (487)
++. ...+.||++|+... ..+..++++.+++. +|+|.+-.+- .....|.+ .|+ .....+....+.+
T Consensus 156 i~~v~~~~~~pv~vk~~~~-~~~~~~~a~~l~~~G~d~i~v~~~~-~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i 233 (311)
T 1ep3_A 156 VKACKAVSKVPLYVKLSPN-VTDIVPIAKAVEAAGADGLTMINTL-MGVRFDLKTRQPILANITGGLSGPAIKPVALKLI 233 (311)
T ss_dssp HHHHHHHCSSCEEEEECSC-SSCSHHHHHHHHHTTCSEEEECCCE-EECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCC-hHHHHHHHHHHHHcCCCEEEEeCCC-cccccCcccCCccccCCCCcccCccchHHHHHHH
Confidence 642 12268999999732 12344556666555 7888873210 00000111 011 1122344455777
Q ss_pred HHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 264 ~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
+.+++.+++||++.+ ++.+..++.+.++ +|+|+|++ ||.
T Consensus 234 ~~i~~~~~ipvia~G----GI~~~~d~~~~l~-~GAd~V~v-g~~ 272 (311)
T 1ep3_A 234 HQVAQDVDIPIIGMG----GVANAQDVLEMYM-AGASAVAV-GTA 272 (311)
T ss_dssp HHHHTTCSSCEEECS----SCCSHHHHHHHHH-HTCSEEEE-CTH
T ss_pred HHHHHhcCCCEEEEC----CcCCHHHHHHHHH-cCCCEEEE-CHH
Confidence 778888899999997 6777888888776 79999999 875
No 97
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=98.56 E-value=3.8e-07 Score=93.76 Aligned_cols=136 Identities=15% Similarity=0.145 Sum_probs=108.2
Q ss_pred CCeeeeeccCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeec
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRI 280 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~ 280 (487)
.|+...+...+++.+.+.++.+.+ .++.|+|++|+ +++...++++++++++ ++++.++..-
T Consensus 135 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 135 APMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 344433433578888887776544 49999999886 3566778899999988 4888888777
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
+++.++..++++.++++|+ .|. + + +. +++..+++++.+++||++++.+.+.++++++++...+|.|+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iE-------~-P-~~---~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ 265 (379)
T 2rdx_A 199 GWRVDNAIRLARATRDLDY-ILE-------Q-P-CR---SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICC 265 (379)
T ss_dssp CSCHHHHHHHHHHTTTSCC-EEE-------C-C-SS---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhCCe-EEe-------C-C-cC---CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 7888888999999999998 662 2 1 32 89999999999999999999999999999999888899999
Q ss_pred eccccccC
Q psy7343 361 TAEGNLYN 368 (487)
Q Consensus 361 iGRa~l~~ 368 (487)
+-.+.++.
T Consensus 266 ik~~~~GG 273 (379)
T 2rdx_A 266 LKISNLGG 273 (379)
T ss_dssp EETTTTTS
T ss_pred EeccccCC
Confidence 87655554
No 98
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=98.55 E-value=3.9e-07 Score=93.41 Aligned_cols=131 Identities=15% Similarity=0.132 Sum_probs=107.1
Q ss_pred CHHHHHHHHHhhC-CcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHH
Q psy7343 214 DSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 214 d~~~~~~aa~~~~-~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~ 290 (487)
+++++.+.++.+. +.++.|+|++|++ +++...++++++++++ ++++.++..-+++.++..++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~ 210 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRA 210 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 7888887776554 4599999998873 3566678888888887 68898888777888889999
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCc
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P 369 (487)
++.++++|++.|- |. + ...+|+..+++++.+++||++++.+.|.++++++++..++|.|++-.+.++..
T Consensus 211 ~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 279 (371)
T 2ovl_A 211 ARALAPFDLHWIE-------EP--T-IPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGY 279 (371)
T ss_dssp HHHHGGGCCSEEE-------CC--S-CTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSH
T ss_pred HHHHHhcCCCEEE-------CC--C-CcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCH
Confidence 9999999999873 21 2 34589999999999999999999999999999999888899999876655553
No 99
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.54 E-value=8.1e-07 Score=85.61 Aligned_cols=161 Identities=14% Similarity=0.102 Sum_probs=107.9
Q ss_pred CCeeeeeccCCH--HHHHHHHHhhCCcCcEEEee--cCCCcceeeccCccc-----cc--cCChHHHHHHHHHHhhhccC
Q psy7343 204 RPLIIQFCGNDS--KNLTEAAKLAEPHCDGIDIN--IGCPQMVAKRGHYGA-----YL--QDDWPLLTNLVSSLRQAVQV 272 (487)
Q Consensus 204 ~Pv~Vqi~g~d~--~~~~~aa~~~~~~~d~IdiN--~GcP~~i~~~gr~G~-----~l--~~d~~~i~eiv~~v~~~~~i 272 (487)
..++..+...|+ +++.+.++.+++..|.|+++ .++|.. .|.+-. ++ -.+.....++++++++.+++
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~a~~~~~~ad~iel~~p~sdp~~---DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~ 81 (248)
T 1geq_A 5 GSLIPYLTAGDPDKQSTLNFLLALDEYAGAIELGIPFSDPIA---DGKTIQESHYRALKNGFKLREAFWIVKEFRRHSST 81 (248)
T ss_dssp TEEEEEEETTSSCHHHHHHHHHHHGGGBSCEEEECCCSCCTT---SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCC
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEECCCCCCCCC---CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCC
Confidence 356777765566 68888887775558888887 455532 111000 00 12566678889999988889
Q ss_pred cEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEc-------c-------------------ccC----------C----
Q psy7343 273 PVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHG-------R-------------------TVD----------Q---- 311 (487)
Q Consensus 273 PV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~Vhg-------R-------------------t~~----------~---- 311 (487)
||.+-+.... -.....+.++.+.++|+|+|++|. + +.. .
T Consensus 82 pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~ 161 (248)
T 1geq_A 82 PIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVY 161 (248)
T ss_dssp CEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSEEE
T ss_pred CEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCeEE
Confidence 9888652211 001236788888889999999853 0 000 0
Q ss_pred ---CCCCCCC------CCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 312 ---RGMNTGL------ASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 312 ---~g~~~g~------~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
..+++|. ...+.++++++.+++||++.|||++.+++.+++ ..|||+|.+|++++..
T Consensus 162 ~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~-~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 162 LVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLL-KEGANGVVVGSALVKI 226 (248)
T ss_dssp EECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred EEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHH-HcCCCEEEEcHHHHhh
Confidence 0111222 135688899998899999999999999999998 6899999999998765
No 100
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=98.50 E-value=1.3e-06 Score=88.07 Aligned_cols=195 Identities=14% Similarity=0.072 Sum_probs=101.9
Q ss_pred CCceEEecCCCCCCH------HHHHHHHHcCCCeEEccceecccccc-CcHHHHHHhhhCCCCCcee-----eeeccccC
Q psy7343 78 SPRFILAPMVDASEL------PWRLLSRRYGSHLCYTPMVSAHQFIA-DKKLRQEILMSTPEDRPLI-----IQRTIFPR 145 (487)
Q Consensus 78 ~~~~~LAPMag~td~------pFR~l~~~~Gadl~~TEMi~a~~l~~-~~~~~~~~~~~~~~e~p~~-----vQl~~~~~ 145 (487)
+.|+++|||++.++. +|++.|+++|+..+++||.++ +.. +.....+ +.....+.|++ .|+.
T Consensus 58 ~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~--le~~~~~~~~q-l~~~~~d~pv~~~~~~~q~~---- 130 (332)
T 1vcf_A 58 KAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRIL--LERPEALRSFR-VRKVAPKALLIANLGLAQLR---- 130 (332)
T ss_dssp SSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHH--HHCTTTHHHHC-CTTTCSSSCEEEEEEGGGGG----
T ss_pred CCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhc--ccCCCccceEE-eeccCCCceeecccChhhhh----
Confidence 568999999998864 999999999999999999886 322 2222222 22222356664 3321
Q ss_pred CCCCccccccccCCCchHHHHHHHHhCCccce-e-ccccchhhhcChhH----HHHHHh--cCCCCCCeeee-ec-cCCH
Q psy7343 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCY-T-PMVSAHQFIADKKL----RQEILM--STPEDRPLIIQ-FC-GNDS 215 (487)
Q Consensus 146 ~g~~~~~lApma~~td~~fr~i~~~~Ga~l~~-t-~~v~~~~Ll~~~~~----~~~~l~--~~~~~~Pv~Vq-i~-g~d~ 215 (487)
+ .....+.......|++... . .+. ...+. ++.. ..+.++ .. .+.||++| +. +.++
T Consensus 131 -~-----------~~~~~~~~a~~~~~~~a~~i~~n~~-~~~~~-~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~ 195 (332)
T 1vcf_A 131 -R-----------YGRDDLLRLVEMLEADALAFHVNPL-QEAVQ-RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSR 195 (332)
T ss_dssp -T-----------CCHHHHHHHHHHHTCSEEEEECCHH-HHHHT-TSCCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCH
T ss_pred -c-----------cChHHHHHHHhhcCCCceeeccchH-HHHhc-CCCccHHHHHHHHHHHHc-CCCCEEEEecCCCCCH
Confidence 1 1111111222222332110 0 000 00111 1111 123332 23 57899999 43 3344
Q ss_pred HHHHHHHHhhCCc-CcEEEe--ecCCCcc-e--eec---cCcc---ccccCChHHHHHHHHHHhhhc-cCcEEEEeeccc
Q psy7343 216 KNLTEAAKLAEPH-CDGIDI--NIGCPQM-V--AKR---GHYG---AYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQ 282 (487)
Q Consensus 216 ~~~~~aa~~~~~~-~d~Idi--N~GcP~~-i--~~~---gr~G---~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~ 282 (487)
++ ++.++++ +|+|++ +.|.... + .+. +..+ ......++.+ ..+++.+ ++||++.+
T Consensus 196 e~----a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l----~~v~~~~~~ipvia~G---- 263 (332)
T 1vcf_A 196 EA----ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAI----LEVREVLPHLPLVASG---- 263 (332)
T ss_dssp HH----HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHH----HHHHHHCSSSCEEEES----
T ss_pred HH----HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHH----HHHHHhcCCCeEEEEC----
Confidence 33 5566666 899988 3231000 0 010 0000 0011223333 4455566 79999997
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
++.+..++.+.+. .|||+|++ ||.
T Consensus 264 GI~~~~d~~kal~-~GAd~V~i-gr~ 287 (332)
T 1vcf_A 264 GVYTGTDGAKALA-LGADLLAV-ARP 287 (332)
T ss_dssp SCCSHHHHHHHHH-HTCSEEEE-CGG
T ss_pred CCCCHHHHHHHHH-hCCChHhh-hHH
Confidence 8889999999997 69999999 873
No 101
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.50 E-value=5.2e-07 Score=84.44 Aligned_cols=137 Identities=13% Similarity=0.209 Sum_probs=91.6
Q ss_pred CCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc--CcEEEEeec
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ--VPVSCKIRI 280 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~--iPV~vKiR~ 280 (487)
.|+++.+++.+.+++.+.++.+.+. ++.|+++.++|.. .+.++.+++.++ .++.+.
T Consensus 10 ~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~------------------~~~i~~ir~~~~~~~~ig~~--- 68 (205)
T 1wa3_A 10 HKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDA------------------DTVIKELSFLKEKGAIIGAG--- 68 (205)
T ss_dssp HCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH------------------HHHHHHTHHHHHTTCEEEEE---
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------HHHHHHHHHHCCCCcEEEec---
Confidence 5899999999999999999888776 8999998877521 123444555442 333332
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEcccc-------------------CCC-------------CCCC-CCCCHHHHHHH
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTV-------------------DQR-------------GMNT-GLASWEHITAV 327 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~-------------------~~~-------------g~~~-g~~~~~~i~~i 327 (487)
...+..+ ++.+.+.|+|+| +++-.. ... ..+. .....+.++++
T Consensus 69 --~v~~~~~-~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l 144 (205)
T 1wa3_A 69 --TVTSVEQ-CRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAM 144 (205)
T ss_dssp --SCCSHHH-HHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHH
T ss_pred --ccCCHHH-HHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHH
Confidence 2223333 455566788888 633221 000 0000 00124677888
Q ss_pred HhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 328 RKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 328 ~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
++.+ ++||++.|||+ .+++.+++ ..|+|+|.+|++++.
T Consensus 145 ~~~~~~~pvia~GGI~-~~~~~~~~-~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 145 KGPFPNVKFVPTGGVN-LDNVCEWF-KAGVLAVGVGSALVK 183 (205)
T ss_dssp HTTCTTCEEEEBSSCC-TTTHHHHH-HHTCSCEEECHHHHC
T ss_pred HHhCCCCcEEEcCCCC-HHHHHHHH-HCCCCEEEECccccC
Confidence 8888 89999999996 78999999 789999999999887
No 102
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.48 E-value=1.5e-06 Score=86.19 Aligned_cols=67 Identities=27% Similarity=0.389 Sum_probs=52.3
Q ss_pred CCHHHHHHHHhhCCCcEE--EcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccccCCCCCcHHHHHHHHHHHHHcC
Q psy7343 319 ASWEHITAVRKALTIPVI--ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQYP 394 (487)
Q Consensus 319 ~~~~~i~~i~~~~~iPVi--~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~~~~~~~~~~~~~l~~~~~~~ 394 (487)
.+++.++++++..++|++ +.|||.|.+|+.+++ +.|||+|++|++++..++ +.+.++++.+.+.++.
T Consensus 194 ~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~-~aGadgvvvGsai~~~~d--------p~~~~~~l~~~i~~~~ 262 (297)
T 2zbt_A 194 APFELVKWVHDHGRLPVVNFAAGGIATPADAALMM-HLGMDGVFVGSGIFKSGD--------PRKRARAIVRAVAHYN 262 (297)
T ss_dssp CCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHH-HTTCSEEEECGGGGGSSC--------HHHHHHHHHHHHHTTT
T ss_pred hhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHH-HcCCCEEEEchHHhCCCC--------HHHHHHHHHHHHHHHh
Confidence 456889999998899998 999999999999999 689999999999985432 2244555555555543
No 103
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.47 E-value=1.5e-07 Score=90.92 Aligned_cols=85 Identities=20% Similarity=0.286 Sum_probs=72.0
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
.+..++++.++++|+|.|.++....... ....+++.++++++.+++||+++|+|.+++++.+++ +.|||+|++|++
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~---~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~-~~Gad~V~lg~~ 105 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVE---KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELI-LRGADKVSINTA 105 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSS---HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HTTCSEEEESHH
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhc---CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH-HcCCCEEEEChH
Confidence 4788999999999999999986643221 122467889999999999999999999999999999 679999999999
Q ss_pred cccCccccc
Q psy7343 365 NLYNPALFT 373 (487)
Q Consensus 365 ~l~~P~lf~ 373 (487)
++.+|+++.
T Consensus 106 ~l~~p~~~~ 114 (253)
T 1thf_D 106 AVENPSLIT 114 (253)
T ss_dssp HHHCTHHHH
T ss_pred HHhChHHHH
Confidence 999998764
No 104
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.45 E-value=7.1e-07 Score=92.02 Aligned_cols=136 Identities=15% Similarity=0.113 Sum_probs=107.8
Q ss_pred CCeeeeec-cCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 204 RPLIIQFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~-g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
.|+...+. ..+++++.+.++.+.+ .++.|+|++|+ .+++. .++++++++++ ++++.++..
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDan 216 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADMH 216 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEECC
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEECC
Confidence 45554443 3588888887776544 49999999775 14566 78888888877 688888877
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+++.++..++++.++++|++.|. + + + ...+|+..+++++.+++||++++.+.+.++++++++...+|.|
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v 286 (388)
T 2nql_A 217 WNQTPERALELIAEMQPFDPWFAE-------A-P-V-WTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIV 286 (388)
T ss_dssp SCSCHHHHHHHHHHHGGGCCSCEE-------C-C-S-CTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCCCEEE-------C-C-C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEE
Confidence 778888889999999999999873 2 1 2 3458999999999999999999999999999999977789999
Q ss_pred Eecccc
Q psy7343 360 MTAEGN 365 (487)
Q Consensus 360 miGRa~ 365 (487)
++-...
T Consensus 287 ~ik~~~ 292 (388)
T 2nql_A 287 QPEMGH 292 (388)
T ss_dssp CCCHHH
T ss_pred EecCCC
Confidence 986544
No 105
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=98.45 E-value=1e-06 Score=90.10 Aligned_cols=139 Identities=10% Similarity=0.125 Sum_probs=110.1
Q ss_pred CCeeeeeccCCHHHHHHHHHhhC-CcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeec
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRI 280 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~-~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~ 280 (487)
.|+...+.+.+++++.+.++.+. +.|+.|+|++|+ +++...++++++++++ ++++.+...-
T Consensus 131 v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 194 (369)
T 2p8b_A 131 FPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDVNQ 194 (369)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred eeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 45555666678888887776554 458999998774 3566678888888887 5788887766
Q ss_pred ccccccHH-HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 281 YQDVNKTV-EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 281 ~~d~~~~~-e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
+++.++.. ++++.++++|++.|. |. + ...+|+..+++++.+++||++++.+.+.+++.++++...+|.|
T Consensus 195 ~~~~~~a~~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v 264 (369)
T 2p8b_A 195 GWKNSANTLTALRSLGHLNIDWIE-------QP--V-IADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKV 264 (369)
T ss_dssp TTBSHHHHHHHHHTSTTSCCSCEE-------CC--B-CTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEE-------CC--C-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEE
Confidence 78888888 999999999999774 21 2 3457999999999999999999999999999999987889999
Q ss_pred EeccccccC
Q psy7343 360 MTAEGNLYN 368 (487)
Q Consensus 360 miGRa~l~~ 368 (487)
++-..-++.
T Consensus 265 ~ik~~~~GG 273 (369)
T 2p8b_A 265 NIKLMKCGG 273 (369)
T ss_dssp EECHHHHTS
T ss_pred EeecchhCC
Confidence 987655444
No 106
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=98.44 E-value=1.2e-07 Score=97.27 Aligned_cols=196 Identities=15% Similarity=0.156 Sum_probs=102.0
Q ss_pred CCceEEecCCCCCCHH-------HHHHHHHcCCCeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCc
Q psy7343 78 SPRFILAPMVDASELP-------WRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPR 150 (487)
Q Consensus 78 ~~~~~LAPMag~td~p-------FR~l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~ 150 (487)
+.++++||| |+++++ |++.|+++|+..++|+|.+.. .+.+..... .|..+|+... .+..
T Consensus 71 ~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~---------ieev~~~~~-~~~~~QLy~~---~d~~ 136 (370)
T 1gox_A 71 SMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATSS---------VEEVASTGP-GIRFFQLYVY---KDRN 136 (370)
T ss_dssp SSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSC---------HHHHHTTCC-CCEEEEECCB---SSHH
T ss_pred CCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCCC---------HHHHHhhcC-CCceEEEecC---CCch
Confidence 568999999 999998 999999999999999998541 122222212 6788997422 1110
Q ss_pred cc---c--ccccCC------CchH-----HHHHHHHhCCcc------ceec------cccchhh------hcChhHHHHH
Q psy7343 151 FI---L--APMVDA------SELP-----WRLLSRRYGSHL------CYTP------MVSAHQF------IADKKLRQEI 196 (487)
Q Consensus 151 ~~---l--Apma~~------td~~-----fr~i~~~~Ga~l------~~t~------~v~~~~L------l~~~~~~~~~ 196 (487)
.. + +-.+|+ .|.+ .+.+...++... ...+ ...+..+ ..++....+.
T Consensus 137 ~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~ 216 (370)
T 1gox_A 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKD 216 (370)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHH
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHH
Confidence 00 0 000010 0111 011111111000 0000 0011111 1223222122
Q ss_pred Hh--cCCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCc
Q psy7343 197 LM--STPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVP 273 (487)
Q Consensus 197 l~--~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iP 273 (487)
+. ....+.||++|... +++ .++.+.++ +|+|.++... - +. ..++ ..+++.+.++.+.+.. ++|
T Consensus 217 i~~l~~~~~~pv~vK~~~-~~e----~a~~a~~~Gad~I~vs~~g-g---r~-~~~~--~~~~~~l~~v~~~~~~--~ip 282 (370)
T 1gox_A 217 VAWLQTITSLPILVKGVI-TAE----DARLAVQHGAAGIIVSNHG-A---RQ-LDYV--PATIMALEEVVKAAQG--RIP 282 (370)
T ss_dssp HHHHHHHCCSCEEEECCC-SHH----HHHHHHHTTCSEEEECCGG-G---TS-STTC--CCHHHHHHHHHHHTTT--SSC
T ss_pred HHHHHHHhCCCEEEEecC-CHH----HHHHHHHcCCCEEEECCCC-C---cc-CCCc--ccHHHHHHHHHHHhCC--CCE
Confidence 21 11236899998763 333 23444444 7888883110 0 00 0111 2345555555443321 699
Q ss_pred EEEEeecccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 274 VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 274 V~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
|++.+ ++.+..++.+.+. .|+|+|+| ||
T Consensus 283 via~G----GI~~~~D~~k~l~-~GAdaV~i-Gr 310 (370)
T 1gox_A 283 VFLDG----GVRRGTDVFKALA-LGAAGVFI-GR 310 (370)
T ss_dssp EEEES----SCCSHHHHHHHHH-HTCSEEEE-CH
T ss_pred EEEEC----CCCCHHHHHHHHH-cCCCEEee-cH
Confidence 99997 8888899998887 89999999 77
No 107
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.44 E-value=5.2e-06 Score=82.27 Aligned_cols=68 Identities=29% Similarity=0.433 Sum_probs=53.9
Q ss_pred CCCHHHHHHHHhhCCCcEE--EcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccccCCCCCcHHHHHHHHHHHHHcC
Q psy7343 318 LASWEHITAVRKALTIPVI--ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQYP 394 (487)
Q Consensus 318 ~~~~~~i~~i~~~~~iPVi--~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~~~~~~~~~~~~~l~~~~~~~ 394 (487)
..+++.++++++.+++||+ +.|||.|++|+.+++ ..|||+|++|++++..++. .+.++++.+.+..|.
T Consensus 193 ~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~-~~GAdgVlVGsai~~a~dp--------~~~~~~l~~ai~~~~ 262 (297)
T 4adt_A 193 RAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCM-QLGMDGVFVGSGIFESENP--------QKMASSIVMAVSNFN 262 (297)
T ss_dssp TCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHH-HTTCSCEEESHHHHTSSCH--------HHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHH-HcCCCEEEEhHHHHcCCCH--------HHHHHHHHHHHHhhC
Confidence 3567889999999899987 899999999999999 6899999999999875432 234555566566654
No 108
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.44 E-value=1.8e-07 Score=90.42 Aligned_cols=85 Identities=21% Similarity=0.328 Sum_probs=72.0
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
.+..++++.+++.|+|.|.++....... ....+++.++++++.+++||+++|+|++.+++++++ +.|||+|++|++
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~---~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~-~~Gad~V~lg~~ 106 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHE---ERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLL-LSGADKVSVNSA 106 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTT---CHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HHTCSEEEECHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCcccc---CccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHH-HcCCCEEEEChH
Confidence 4788999999999999999976543221 122457889999999999999999999999999999 679999999999
Q ss_pred cccCccccc
Q psy7343 365 NLYNPALFT 373 (487)
Q Consensus 365 ~l~~P~lf~ 373 (487)
++.+|+++.
T Consensus 107 ~l~~p~~~~ 115 (252)
T 1ka9_F 107 AVRRPELIR 115 (252)
T ss_dssp HHHCTHHHH
T ss_pred HHhCcHHHH
Confidence 999998754
No 109
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.42 E-value=1e-06 Score=90.57 Aligned_cols=141 Identities=11% Similarity=0.056 Sum_probs=113.8
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEe
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKI 278 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKi 278 (487)
...|+..++.+.+++.+.+.++.+ ++.++.|.+++|| +++.-.+.++++++++ ++++.+..
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~g~~~~l~vDa 196 (378)
T 3eez_A 133 TPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------DVERDIARIRDVEDIREPGEIVLYDV 196 (378)
T ss_dssp SCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHTTSCCTTCEEEEEC
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 346777777778899888877654 4458999998886 3555677888899987 57888888
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
.-+|+..+..++++.+++.|+ .|- | + + .+++..+++++.+++||++++.+.+.+++.++++..++|.
T Consensus 197 n~~~~~~~a~~~~~~l~~~~i-~iE-------q-P-~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~ 263 (378)
T 3eez_A 197 NRGWTRQQALRVMRATEDLHV-MFE-------Q-P-G---ETLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEV 263 (378)
T ss_dssp TTCCCHHHHHHHHHHTGGGTC-CEE-------C-C-S---SSHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred CCCCCHHHHHHHHHHhccCCe-EEe-------c-C-C---CCHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCE
Confidence 778888888999999999987 652 2 1 2 2799999999999999999999999999999998788999
Q ss_pred EEeccccccCccc
Q psy7343 359 VMTAEGNLYNPAL 371 (487)
Q Consensus 359 VmiGRa~l~~P~l 371 (487)
|++-.+.++..+-
T Consensus 264 v~ik~~~~GGit~ 276 (378)
T 3eez_A 264 FGIKLNRVGGLTR 276 (378)
T ss_dssp EEEEHHHHTSHHH
T ss_pred EEeCchhcCCHHH
Confidence 9998877666443
No 110
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=98.42 E-value=9.8e-07 Score=90.63 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=108.7
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
..|+...+...+++.+.+.++.+.+ .|+.|++++|+| +++...++++++++++ ++++.++..
T Consensus 134 ~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 198 (378)
T 2qdd_A 134 PVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDVN 198 (378)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEECT
T ss_pred CCceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 3455544544688888887766544 499999998884 4566778888999887 578888876
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+++.++..++++.++ +|+ .| +|. +. +|+..+++++.+++||++++.+.+.++++++++...+|.|
T Consensus 199 ~~~~~~~a~~~~~~l~-~~i-~i-------EqP--~~---d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v 264 (378)
T 2qdd_A 199 RAWTPAIAVEVLNSVR-ARD-WI-------EQP--CQ---TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGV 264 (378)
T ss_dssp TCCCHHHHHHHHTSCC-CCC-EE-------ECC--SS---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHhC-CCc-EE-------EcC--CC---CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEE
Confidence 6777778888888888 888 54 221 32 8999999999999999999999999999999988889999
Q ss_pred EeccccccCcc
Q psy7343 360 MTAEGNLYNPA 370 (487)
Q Consensus 360 miGRa~l~~P~ 370 (487)
++-...++.++
T Consensus 265 ~ik~~~~GGi~ 275 (378)
T 2qdd_A 265 KIKPNRVGGLT 275 (378)
T ss_dssp EECHHHHTSHH
T ss_pred EecccccCCHH
Confidence 99776665543
No 111
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.41 E-value=2e-06 Score=100.09 Aligned_cols=110 Identities=15% Similarity=0.184 Sum_probs=83.4
Q ss_pred ChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCC------CCCCCCCHHHHHHH
Q psy7343 255 DWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRG------MNTGLASWEHITAV 327 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g------~~~g~~~~~~i~~i 327 (487)
+++.+.++++.+++.. ++||++|+-.. ....+.++.++++|+|+|.|.|....... ...|.+....+.++
T Consensus 976 s~edl~~~I~~Lk~~~~~~PV~VKlv~~---~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev 1052 (1479)
T 1ea0_A 976 SIEDLAQLIYDLKQINPDAKVTVKLVSR---SGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEV 1052 (1479)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEEECC---TTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEEcCC---CChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHH
Confidence 4677889999999887 89999997322 24556788899999999999765321110 01233344666666
Q ss_pred HhhC-------CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 328 RKAL-------TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 328 ~~~~-------~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
.+.+ ++|||+.|||.|..|+.+++ ..|||+|++||+++..
T Consensus 1053 ~~al~~~glr~~VpVIAdGGIrtG~DVakAL-aLGAdaV~iGTafL~a 1099 (1479)
T 1ea0_A 1053 HQVLTLNRLRHRVRLRTDGGLKTGRDIVIAA-MLGAEEFGIGTASLIA 1099 (1479)
T ss_dssp HHHHHTTTCTTTSEEEEESSCCSHHHHHHHH-HTTCSEEECCHHHHHH
T ss_pred HHHHHHcCCCCCceEEEECCCCCHHHHHHHH-HcCCCeeeEcHHHHHH
Confidence 6643 79999999999999999999 7999999999999763
No 112
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=98.41 E-value=2.2e-07 Score=99.09 Aligned_cols=193 Identities=15% Similarity=0.147 Sum_probs=107.4
Q ss_pred CCceEEecCCC---C----CCHHHHHHHHH--cCCCeEEccceec-cccccCcHHHHHHhhhC-CCCCceeeeeccccCC
Q psy7343 78 SPRFILAPMVD---A----SELPWRLLSRR--YGSHLCYTPMVSA-HQFIADKKLRQEILMST-PEDRPLIIQRTIFPRL 146 (487)
Q Consensus 78 ~~~~~LAPMag---~----td~pFR~l~~~--~Gadl~~TEMi~a-~~l~~~~~~~~~~~~~~-~~e~p~~vQl~~~~~~ 146 (487)
+.++++|||++ + ++.+|++.|++ +|+.+++|||.+. -..+ .... ..+.|..+|+...
T Consensus 189 ~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v---------~~~~~~~~~~~~~QLy~~--- 256 (511)
T 1kbi_A 189 DVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEI---------IEAAPSDKQIQWYQLYVN--- 256 (511)
T ss_dssp SSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHH---------HHTCCCSSCCEEEEECCC---
T ss_pred CCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHH---------HhhcCCCCCCeEEEEeec---
Confidence 56899999998 4 58999999999 9999999999433 2211 1122 2457889997422
Q ss_pred CCCccccc------cccCCC------chH---HHH--HHHHhCCccceecc-----------ccc-hhhh---cChhHHH
Q psy7343 147 GSPRFILA------PMVDAS------ELP---WRL--LSRRYGSHLCYTPM-----------VSA-HQFI---ADKKLRQ 194 (487)
Q Consensus 147 g~~~~~lA------pma~~t------d~~---fr~--i~~~~Ga~l~~t~~-----------v~~-~~Ll---~~~~~~~ 194 (487)
..+.+.+ -++++. |.+ +|. +..++. ++... ..+ ..++ .++....
T Consensus 257 -~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~---~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~ 332 (511)
T 1kbi_A 257 -SDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFS---NTKAGPKAMKKTNVEESQGASRALSKFIDPSLTW 332 (511)
T ss_dssp -SSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHT---TCC-------CCCCSSCCCGGGGCBTTBCTTCCH
T ss_pred -CCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCC---CCcccccccccccccccccHHHHHhhccChHhHH
Confidence 1111111 111110 111 111 111111 11000 000 1112 2333222
Q ss_pred HHHh--cCCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccc---cCChHHHHHHHHHHhh
Q psy7343 195 EILM--STPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYL---QDDWPLLTNLVSSLRQ 268 (487)
Q Consensus 195 ~~l~--~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l---~~d~~~i~eiv~~v~~ 268 (487)
+.++ ....+.||++|..+ +. +.|+.++++ +|+|.+.. || |.++ ...++.+.++.+++++
T Consensus 333 ~~i~~lr~~~~~PvivKgv~-~~----e~A~~a~~aGad~I~vs~--------hg--G~~~d~~~~~~~~l~~v~~~v~~ 397 (511)
T 1kbi_A 333 KDIEELKKKTKLPIVIKGVQ-RT----EDVIKAAEIGVSGVVLSN--------HG--GRQLDFSRAPIEVLAETMPILEQ 397 (511)
T ss_dssp HHHHHHHHHCSSCEEEEEEC-SH----HHHHHHHHTTCSEEEECC--------TT--TTSSTTCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCcEEEEeCC-CH----HHHHHHHHcCCCEEEEcC--------CC--CccCCCCCchHHHHHHHHHHHHh
Confidence 3332 11236899999544 23 335555555 78887721 11 1121 2345667777666643
Q ss_pred ---hccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 269 ---AVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 269 ---~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
.-++||++.+ ++.+..++++.+. .|||+|+| ||
T Consensus 398 ~~~~~~ipVia~G----GI~~g~Dv~kaLa-lGAdaV~i-Gr 433 (511)
T 1kbi_A 398 RNLKDKLEVFVDG----GVRRGTDVLKALC-LGAKGVGL-GR 433 (511)
T ss_dssp TTCBTTBEEEEES----SCCSHHHHHHHHH-HTCSEEEE-CH
T ss_pred hccCCCcEEEEEC----CCCCHHHHHHHHH-cCCCEEEE-CH
Confidence 1269999997 8889999999997 79999999 87
No 113
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.39 E-value=2.6e-06 Score=83.26 Aligned_cols=161 Identities=14% Similarity=0.132 Sum_probs=104.8
Q ss_pred CCeeeeeccCC--HHHHHHHHHhhCCc-CcEEEeecC--CCcc---eeeccCccccc--cCChHHHHHHHHHHhhh-ccC
Q psy7343 204 RPLIIQFCGND--SKNLTEAAKLAEPH-CDGIDINIG--CPQM---VAKRGHYGAYL--QDDWPLLTNLVSSLRQA-VQV 272 (487)
Q Consensus 204 ~Pv~Vqi~g~d--~~~~~~aa~~~~~~-~d~IdiN~G--cP~~---i~~~gr~G~~l--~~d~~~i~eiv~~v~~~-~~i 272 (487)
..++.-+-..| .+.+.+.++.++++ +|.|||.+- -|.. ...+.. -.+| --+.+.+.++++.+|+. .++
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~-~~AL~~G~~~~~~~~~v~~ir~~~~~~ 96 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGAN-LRSLAAGTTSSDCFDIITKVRAQHPDM 96 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHH-HHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 34555555334 48899999888776 899988632 2321 111100 0011 13567778889999987 789
Q ss_pred cEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEcc--------------------------cc-----------C----
Q psy7343 273 PVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGR--------------------------TV-----------D---- 310 (487)
Q Consensus 273 PV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgR--------------------------t~-----------~---- 310 (487)
|+.+-+-.+. -......+++.+.++|+|++.++.- |. .
T Consensus 97 Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY 176 (267)
T 3vnd_A 97 PIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTY 176 (267)
T ss_dssp CEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEE
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEE
Confidence 9988641111 0113477888888889999887320 10 0
Q ss_pred --CCCCCCCCC------CHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccc
Q psy7343 311 --QRGMNTGLA------SWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNL 366 (487)
Q Consensus 311 --~~g~~~g~~------~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l 366 (487)
...+.+|.. ..+.++++++..++||++.|||+|++++.+.+ ..|||+|.+|+++.
T Consensus 177 ~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~-~~gADgvVVGSaiv 239 (267)
T 3vnd_A 177 LLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAI-KAGAAGAISGSAVV 239 (267)
T ss_dssp ESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHH-HTTCSEEEECHHHH
T ss_pred EEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECHHHH
Confidence 011122221 24788999999999999999999999999777 68999999999765
No 114
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.38 E-value=2.4e-06 Score=83.22 Aligned_cols=160 Identities=18% Similarity=0.178 Sum_probs=99.5
Q ss_pred CCeeeeeccCC--HHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCc-----cccc--cCChHHHHHHHHHHhhhccCc
Q psy7343 204 RPLIIQFCGND--SKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHY-----GAYL--QDDWPLLTNLVSSLRQAVQVP 273 (487)
Q Consensus 204 ~Pv~Vqi~g~d--~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~-----G~~l--~~d~~~i~eiv~~v~~~~~iP 273 (487)
..++.-+...+ .+.+.+.++.+++. .|.|+++.-+...+. .|.+ ...+ -.+.+...++++++++.+++|
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~-dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~P 96 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYI-DGPIIQASVARALASGTTMDAVLEMLREVTPELSCP 96 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTT-SCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSC
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccc-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 34555554334 47888888877766 899999765421111 1100 0000 126777888999999888999
Q ss_pred EEEEeecccccccHHHHHHHHHHcCCcEEEEEc--------------------------cccC-----------------
Q psy7343 274 VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHG--------------------------RTVD----------------- 310 (487)
Q Consensus 274 V~vKiR~~~d~~~~~e~a~~le~~G~d~I~Vhg--------------------------Rt~~----------------- 310 (487)
|.+..+....... ..+.+.++|+|+|+++. .+..
T Consensus 97 v~~m~~~~~~~~~---~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~ 173 (262)
T 1rd5_A 97 VVLLSYYKPIMFR---SLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLV 173 (262)
T ss_dssp EEEECCSHHHHSC---CTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEE
T ss_pred EEEEecCcHHHHH---HHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEe
Confidence 9887532210000 01124555666555422 1100
Q ss_pred CCCCCCCC-----C-CHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 311 QRGMNTGL-----A-SWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 311 ~~g~~~g~-----~-~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
...+++|. . ..+.++++++..++||++.|||+|++++.+++ ..|||+|++|+++...
T Consensus 174 s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~-~~GAdgvvVGSai~~~ 236 (262)
T 1rd5_A 174 SVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIA-QWGADGVIIGSAMVRQ 236 (262)
T ss_dssp CSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred cCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHH-HcCCCEEEEChHHHhH
Confidence 01122332 1 23688899998999999999999999999998 6899999999987654
No 115
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.37 E-value=1.4e-06 Score=105.33 Aligned_cols=196 Identities=10% Similarity=0.089 Sum_probs=121.1
Q ss_pred CCCCccccccccCC-CchHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHh----cCCCCCCeeeeeccCCHH---
Q psy7343 146 LGSPRFILAPMVDA-SELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILM----STPEDRPLIIQFCGNDSK--- 216 (487)
Q Consensus 146 ~g~~~~~lApma~~-td~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~d~~--- 216 (487)
+|..|+++++|+.. ++..+-....|.|. +. +.|.+. ..++..++-++ ....+.|+.|++.-.++.
T Consensus 587 lg~~PIi~~gM~~~~~~~~lvaAvsnAGglg~-----l~~~~~-~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~ 660 (2051)
T 2uv8_G 587 IGRPPLLVPGMTPCTVSPDFVAATTNAGYTIE-----LAGGGY-FSAAGMTAAIDSVVSQIEKGSTFGINLIYVNPFMLQ 660 (2051)
T ss_dssp HSSCSEEECCCHHHHTCHHHHHHHHHTTCEEE-----EEGGGC-CSHHHHHHHHHHHHHHSCTTCCEEEEEETTCTTHHH
T ss_pred hCccceecCCCccccccHHHHHHHHcCCcEEE-----EccCCC-CCHHHHHHHHHHHHHhcCCCCceEEEEeecChhhhh
Confidence 56789999999944 47777777777773 32 211111 12222222221 224457999997644432
Q ss_pred -HHHHHHHhh-CCc--CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHH
Q psy7343 217 -NLTEAAKLA-EPH--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYAR 292 (487)
Q Consensus 217 -~~~~aa~~~-~~~--~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~ 292 (487)
.+ ++.+.+ ++. .++|.+..|.| .++...++++.+ +++++... .........+.
T Consensus 661 ~~~-~~~~~~~~~gv~i~~v~~~ag~p---------------~~~~~~~~i~~l----G~~vi~~~---~~~~~a~~~~~ 717 (2051)
T 2uv8_G 661 WGI-PLIKELRSKGYPIQFLTIGAGVP---------------SLEVASEYIETL----GLKYLGLK---PGSIDAISQVI 717 (2051)
T ss_dssp HHH-HHHHHHHHTTCSEEEEEEESSCC---------------CHHHHHHHHHHS----CCSCEEEC---CCSHHHHHHHH
T ss_pred hhH-HHHHHHHHcCCCcceEEecCCCC---------------chhhHHHHHHHc----CCEEEEec---CchHHHHHHHH
Confidence 22 444443 333 23344444433 234444555443 88887643 24445666778
Q ss_pred HHHHcCCcEE-EEEccccCCCCCCCCCC-----CHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHH----------hcCC
Q psy7343 293 MLERAGCQLL-AVHGRTVDQRGMNTGLA-----SWEHITAVRKALTIPVIANGNIQCLADVEACLA----------QTGV 356 (487)
Q Consensus 293 ~le~~G~d~I-~VhgRt~~~~g~~~g~~-----~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~----------~~Ga 356 (487)
..+++|+|.+ ++..-+.+. |+..|.. .+..+.++++.++||||+.|||.+.+++..+|. ..||
T Consensus 718 ~~~~~g~d~~ii~~~~G~ea-GGH~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lga 796 (2051)
T 2uv8_G 718 NIAKAHPNFPIALQWTGGRG-GGHHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPF 796 (2051)
T ss_dssp HHHHHSTTSCEEEEECCSSC-SEECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCC
T ss_pred HHHHhCCCceeEEEEEccCc-CCCCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccCccCCCC
Confidence 8889999994 332222222 2333432 235688999999999999999999999999994 5799
Q ss_pred cEEEeccccccCccc
Q psy7343 357 AGVMTAEGNLYNPAL 371 (487)
Q Consensus 357 d~VmiGRa~l~~P~l 371 (487)
|||++|+.++.-..-
T Consensus 797 dGv~~GTrf~~t~Ea 811 (2051)
T 2uv8_G 797 DGFLFGSRVMIAKEV 811 (2051)
T ss_dssp SCEECSGGGTTSTTS
T ss_pred ceeeechHHHhCccc
Confidence 999999999887543
No 116
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.37 E-value=3.4e-06 Score=86.67 Aligned_cols=133 Identities=14% Similarity=0.133 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHH
Q psy7343 213 NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 213 ~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e 289 (487)
.+++++.+.++.+.+ .++.|.|++|++. ++ . ..+++...++++++++++ ++++.+...-+++.++..+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~-------~~-~-~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~ 218 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP-------VS-W-APDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALA 218 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT-------ST-T-CCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-------cc-c-ccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 578888887776544 4999999999853 12 2 247888889999999987 5888888766778888899
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCC-HHHHHHHHHhcCCcEEEeccc
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQC-LADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s-~~da~~~l~~~Gad~VmiGRa 364 (487)
+++.++++|++.|-- + + ...+++..+++++.+++||++.+.+.| .++++++++...+|.|++--.
T Consensus 219 ~~~~l~~~~i~~iE~--------P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 219 LGRGLEKLGFDWIEE--------P-M-DEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp HHHHHHTTTCSEEEC--------C-S-CTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred HHHHHHhcCCCEEeC--------C-C-ChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 999999999998742 1 2 235799999999999999999999999 999999998788999998543
No 117
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.37 E-value=1.9e-06 Score=100.36 Aligned_cols=112 Identities=17% Similarity=0.123 Sum_probs=84.4
Q ss_pred CChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCC------CCCCCCCHHHHHH
Q psy7343 254 DDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRG------MNTGLASWEHITA 326 (487)
Q Consensus 254 ~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g------~~~g~~~~~~i~~ 326 (487)
.+++.+.++++.+++.. ++||++|+-.. ....+.++.++++|+|+|.|.|......+ ...|.+....+.+
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~---~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~e 1086 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAE---IGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTE 1086 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECS---TTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCC---CChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHH
Confidence 35677888999999887 89999997321 24556788899999999999776422110 0123334466666
Q ss_pred HHhhC-------CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCc
Q psy7343 327 VRKAL-------TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 327 i~~~~-------~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P 369 (487)
+.+.+ ++|||+.|||.|..|+.+++ ..|||+|++||++|...
T Consensus 1087 v~~al~~~glr~~IpVIAdGGIrtG~DVakAL-aLGAdaV~iGTafL~al 1135 (1520)
T 1ofd_A 1087 VHRVLMENQLRDRVLLRADGGLKTGWDVVMAA-LMGAEEYGFGSIAMIAE 1135 (1520)
T ss_dssp HHHHHHHTTCGGGCEEEEESSCCSHHHHHHHH-HTTCSEEECSHHHHHHT
T ss_pred HHHHHHhcCCCCCceEEEECCCCCHHHHHHHH-HcCCCeeEEcHHHHHHH
Confidence 65543 69999999999999999999 79999999999987754
No 118
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=98.37 E-value=4e-06 Score=85.69 Aligned_cols=137 Identities=15% Similarity=0.191 Sum_probs=105.5
Q ss_pred CeeeeeccCCHHHHHHHHHhh-C-CcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeec
Q psy7343 205 PLIIQFCGNDSKNLTEAAKLA-E-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRI 280 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~~~-~-~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~ 280 (487)
|+..-+...+++.+.+.++.+ + ..|+.|.|++|++ +++...++++++++++ ++++.+...-
T Consensus 133 ~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 197 (370)
T 1nu5_A 133 PIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQ 197 (370)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTT
T ss_pred EeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 333334445788888777655 4 4599999998873 3455567788888876 4778777766
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
+++.++..++++.++++|++.|. | + . ...+++..+++++.+++||++.+.+.+.+++.++++...+|.|+
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iE-------q-P-~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 267 (370)
T 1nu5_A 198 GWDEQTASIWIPRLEEAGVELVE-------Q-P-V-PRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFS 267 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEE-------C-C-S-CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhcCcceEe-------C-C-C-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEE
Confidence 77888889999999999999863 2 1 2 34579999999999999999999999999999999877899999
Q ss_pred eccccc
Q psy7343 361 TAEGNL 366 (487)
Q Consensus 361 iGRa~l 366 (487)
+--..+
T Consensus 268 ik~~~~ 273 (370)
T 1nu5_A 268 LKLCNM 273 (370)
T ss_dssp ECHHHH
T ss_pred Echhhc
Confidence 854433
No 119
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.36 E-value=6.3e-06 Score=80.67 Aligned_cols=161 Identities=14% Similarity=0.136 Sum_probs=104.7
Q ss_pred CeeeeeccCCH--HHHHHHHHhhCCc-CcEEEeecCCCcceee-ccCcc-----ccc--cCChHHHHHHHHHHhhh-ccC
Q psy7343 205 PLIIQFCGNDS--KNLTEAAKLAEPH-CDGIDINIGCPQMVAK-RGHYG-----AYL--QDDWPLLTNLVSSLRQA-VQV 272 (487)
Q Consensus 205 Pv~Vqi~g~d~--~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~-~gr~G-----~~l--~~d~~~i~eiv~~v~~~-~~i 272 (487)
.++.-+...|+ +...+.++.+++. .|.|+++. |..-.. +|..- ..+ --+.+...++++++++. +++
T Consensus 18 ~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~--P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (268)
T 1qop_A 18 AFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGV--PFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTI 95 (268)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC--CCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSS
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECC--CCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 45555544344 8888888888776 89999854 321000 00000 000 01355666889999988 799
Q ss_pred cEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccccC-----------------------------------------
Q psy7343 273 PVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRTVD----------------------------------------- 310 (487)
Q Consensus 273 PV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt~~----------------------------------------- 310 (487)
||.+-+-... ......++++.+.++|+|+|++|.-+.+
T Consensus 96 Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~g~v~ 175 (268)
T 1qop_A 96 PIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTY 175 (268)
T ss_dssp CEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEE
T ss_pred CEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCCCcEE
Confidence 9877321110 1123467888888889998887441100
Q ss_pred --CCCCCCCC------CCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 311 --QRGMNTGL------ASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 311 --~~g~~~g~------~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
...+++|. ...+.++++++..++||++.|||+|++++.+++ ..|||+|++|+++...
T Consensus 176 ~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~-~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 176 LLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAV-RAGAAGAISGSAIVKI 240 (268)
T ss_dssp EESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred EEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHH-HcCCCEEEEChHHhhh
Confidence 00023332 135889999999999999999999999999988 6899999999987643
No 120
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.36 E-value=1.7e-06 Score=84.80 Aligned_cols=161 Identities=12% Similarity=0.183 Sum_probs=102.1
Q ss_pred Ceeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCC--Ccc---eeeccCccccc--cCChHHHHHHHHHHhhh-ccCc
Q psy7343 205 PLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGC--PQM---VAKRGHYGAYL--QDDWPLLTNLVSSLRQA-VQVP 273 (487)
Q Consensus 205 Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~Gc--P~~---i~~~gr~G~~l--~~d~~~i~eiv~~v~~~-~~iP 273 (487)
.++.=+- | .+.+...++++.+++. +|.|||.+-- |.. +..+.. -.+| --+.+.+.++++++|+. .++|
T Consensus 21 ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~-~rAL~~G~~~~~~~~~v~~~r~~~~~~P 99 (271)
T 3nav_A 21 AFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGAN-LRALAAKTTPDICFELIAQIRARNPETP 99 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHCTTSC
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHH-HHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 3444343 3 4568888998888775 8999985432 211 111000 0011 13566778889999887 7899
Q ss_pred EEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEc--------------------------cccC----------------
Q psy7343 274 VSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHG--------------------------RTVD---------------- 310 (487)
Q Consensus 274 V~vKiR~~~-d~~~~~e~a~~le~~G~d~I~Vhg--------------------------Rt~~---------------- 310 (487)
+++-+-.+. ...-..++++.+.++|+|++.+.. .+..
T Consensus 100 ivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~ 179 (271)
T 3nav_A 100 IGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYL 179 (271)
T ss_dssp EEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEE
T ss_pred EEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEE
Confidence 988642111 112357778888888888877611 1100
Q ss_pred -CCCCCCCCC------CHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 311 -QRGMNTGLA------SWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 311 -~~g~~~g~~------~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
...+.+|.. ..+.++++++..++||+..+||+|++++.+.+ ..|||+|.+|+++..
T Consensus 180 vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~-~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 180 LSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAI-EAGAAGAISGSAVVK 242 (271)
T ss_dssp CCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHH-HTTCSEEEESHHHHH
T ss_pred EeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHH
Confidence 011123322 13778999999999999999999999999777 689999999998763
No 121
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.34 E-value=4e-06 Score=86.72 Aligned_cols=144 Identities=10% Similarity=0.103 Sum_probs=112.4
Q ss_pred CCCeeeeec-cCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCCh-HHHHHHHHHHhhhc--cCcEEEE
Q psy7343 203 DRPLIIQFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDW-PLLTNLVSSLRQAV--QVPVSCK 277 (487)
Q Consensus 203 ~~Pv~Vqi~-g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~-~~i~eiv~~v~~~~--~iPV~vK 277 (487)
..|+...+. +.+++++.+.++.+.+ .|+.|++++ ||. |. ++ +...++++++++++ ++++.++
T Consensus 133 ~vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~G~d~~l~vD 199 (401)
T 2hzg_A 133 GKRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGLGPDGDLMVD 199 (401)
T ss_dssp CBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ceEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 456654443 5688888887765544 599999985 552 21 45 66678888898887 6888888
Q ss_pred eeccc--ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHh-hCCCcEEEcCCCCCHHHHHHHHHhc
Q psy7343 278 IRIYQ--DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRK-ALTIPVIANGNIQCLADVEACLAQT 354 (487)
Q Consensus 278 iR~~~--d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~-~~~iPVi~nGgI~s~~da~~~l~~~ 354 (487)
..-++ +.++..++++.++++|++.|- +. + ...+|+..+++++ .+++||++++.+.|.++++++++..
T Consensus 200 an~~~~~~~~~a~~~~~~l~~~~i~~iE-------qP--~-~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~ 269 (401)
T 2hzg_A 200 VGQIFGEDVEAAAARLPTLDAAGVLWLE-------EP--F-DAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYG 269 (401)
T ss_dssp CTTTTTTCHHHHHTTHHHHHHTTCSEEE-------CC--S-CTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHS
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC--C-CccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCC
Confidence 87778 888889999999999999873 21 2 3458999999999 8999999999999999999999888
Q ss_pred CCcEEEeccccccCc
Q psy7343 355 GVAGVMTAEGNLYNP 369 (487)
Q Consensus 355 Gad~VmiGRa~l~~P 369 (487)
++|.|++-...++..
T Consensus 270 ~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 270 RIGFIQIDCGRIGGL 284 (401)
T ss_dssp CCSEEEECHHHHTSH
T ss_pred CCCEEEeCcchhCCH
Confidence 899999876555543
No 122
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.34 E-value=4.4e-06 Score=85.45 Aligned_cols=137 Identities=12% Similarity=0.132 Sum_probs=107.4
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
..|+...+.+.+++++.+.++.+.+ .|+.|.|+.|. +++...++++++++++ ++++.+...
T Consensus 135 ~vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan 198 (371)
T 2ps2_A 135 RLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDAN 198 (371)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEECT
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 3455555656688988887776544 58999998774 3566778889999887 578888776
Q ss_pred cccccccHHHHHHHH-HHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 280 IYQDVNKTVEYARML-ERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 280 ~~~d~~~~~e~a~~l-e~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
-+++.++..++++.+ +++|+ .|- + + .. +++..+++++.+++||++.+.+.+.++++++++...+|.
T Consensus 199 ~~~~~~~a~~~~~~l~~~~~i-~iE-------~-P-~~---~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~ 265 (371)
T 2ps2_A 199 GKLSVETALRLLRLLPHGLDF-ALE-------A-P-CA---TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEG 265 (371)
T ss_dssp TBCCHHHHHHHHHHSCTTCCC-EEE-------C-C-BS---SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSE
T ss_pred CCcCHHHHHHHHHHHHhhcCC-cCc-------C-C-cC---CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCE
Confidence 677878888999999 99988 652 2 1 22 899999999999999999999999999999998888999
Q ss_pred EEeccccccC
Q psy7343 359 VMTAEGNLYN 368 (487)
Q Consensus 359 VmiGRa~l~~ 368 (487)
|++--..++.
T Consensus 266 v~ik~~~~GG 275 (371)
T 2ps2_A 266 IDLKISKAGG 275 (371)
T ss_dssp EEEEHHHHTS
T ss_pred EEechhhcCC
Confidence 9986544433
No 123
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.33 E-value=1.3e-05 Score=78.61 Aligned_cols=138 Identities=15% Similarity=0.194 Sum_probs=94.0
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY 281 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~ 281 (487)
.+.||..|=+.-|+.+..++. . -.+|+|-|.... + +.+.+.++++..++ .++.+.+-+
T Consensus 112 v~lPvl~kdfiid~~qv~~A~-~--~GAD~VlLi~a~--------------l-~~~~l~~l~~~a~~-lGl~~lvev--- 169 (272)
T 3qja_A 112 VSIPVLRKDFVVQPYQIHEAR-A--HGADMLLLIVAA--------------L-EQSVLVSMLDRTES-LGMTALVEV--- 169 (272)
T ss_dssp CSSCEEEESCCCSHHHHHHHH-H--TTCSEEEEEGGG--------------S-CHHHHHHHHHHHHH-TTCEEEEEE---
T ss_pred CCCCEEECccccCHHHHHHHH-H--cCCCEEEEeccc--------------C-CHHHHHHHHHHHHH-CCCcEEEEc---
Confidence 467998875555655444332 1 224555443221 1 24556677766654 577776654
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
.+..+ ++...+.|+|.|-+.+|.... ...+.+.+.++.+.+ ++||++.|||.|++|+.++. ..|+|+|
T Consensus 170 ---~t~ee-~~~A~~~Gad~IGv~~r~l~~-----~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~-~~Gadgv 239 (272)
T 3qja_A 170 ---HTEQE-ADRALKAGAKVIGVNARDLMT-----LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYA-GAGADAV 239 (272)
T ss_dssp ---SSHHH-HHHHHHHTCSEEEEESBCTTT-----CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHH-HTTCSEE
T ss_pred ---CCHHH-HHHHHHCCCCEEEECCCcccc-----cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHH-HcCCCEE
Confidence 24444 444557799999997764322 134677888888887 79999999999999999999 7899999
Q ss_pred EeccccccCccc
Q psy7343 360 MTAEGNLYNPAL 371 (487)
Q Consensus 360 miGRa~l~~P~l 371 (487)
.||++++..++.
T Consensus 240 lVGsal~~a~dp 251 (272)
T 3qja_A 240 LVGEGLVTSGDP 251 (272)
T ss_dssp EECHHHHTCSCH
T ss_pred EEcHHHhCCCCH
Confidence 999999877643
No 124
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.32 E-value=4.9e-06 Score=85.81 Aligned_cols=137 Identities=10% Similarity=0.112 Sum_probs=109.0
Q ss_pred CCeeeee-c-cCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEe
Q psy7343 204 RPLIIQF-C-GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKI 278 (487)
Q Consensus 204 ~Pv~Vqi-~-g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKi 278 (487)
.|+...+ . ..+++++.+.++.+ ++.++.|.|++|+ +++.-.++++++++++ ++++.+..
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vDa 202 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVDA 202 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 5666666 4 57888888877655 4458888888776 3566677888888887 57888887
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHH-hhCCCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR-KALTIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~-~~~~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
.-+++.++..++++.+++.|++.|. | + + .+.+++..++++ +.+++||++++.+.+.+++.++++..++|
T Consensus 203 n~~~~~~~A~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d 272 (389)
T 3ozy_A 203 NQSLGRHDALAMLRILDEAGCYWFE-------E-P-L-SIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAID 272 (389)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEE-------S-C-S-CTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCS
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEE-------C-C-C-CcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCC
Confidence 7778888899999999999999884 2 1 2 235789999999 99999999999999999999999878899
Q ss_pred EEEeccccc
Q psy7343 358 GVMTAEGNL 366 (487)
Q Consensus 358 ~VmiGRa~l 366 (487)
.|++--+.+
T Consensus 273 ~v~ik~~~~ 281 (389)
T 3ozy_A 273 VLQADASRA 281 (389)
T ss_dssp EECCCTTTS
T ss_pred EEEeCcccc
Confidence 998754433
No 125
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.31 E-value=3.3e-06 Score=89.60 Aligned_cols=106 Identities=20% Similarity=0.199 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc-------cCCCCCCCCCCCHHHHHHH
Q psy7343 256 WPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT-------VDQRGMNTGLASWEHITAV 327 (487)
Q Consensus 256 ~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt-------~~~~g~~~g~~~~~~i~~i 327 (487)
.+...+.++.+++.+ ++|++++ ++.+ .+.++.+.+.|+|+|.+ |.. +...+ . +.+..+.+.++
T Consensus 258 ~~~~~~~i~~l~~~~p~~pvi~G-----~v~t-~~~a~~~~~~Gad~I~v-g~g~g~~~~tr~~~~-~-~~p~~~~l~~~ 328 (491)
T 1zfj_A 258 SAGVLRKIAEIRAHFPNRTLIAG-----NIAT-AEGARALYDAGVDVVKV-GIGPGSICTTRVVAG-V-GVPQVTAIYDA 328 (491)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEE-----EECS-HHHHHHHHHTTCSEEEE-CSSCCTTBCHHHHTC-C-CCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCCcEeCC-----CccC-HHHHHHHHHcCCCEEEE-CccCCcceEEeeecC-C-CCCcHHHHHHH
Confidence 344556677788887 8999854 3333 46667888999999998 531 11111 1 34566777776
Q ss_pred Hh---hCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 328 RK---ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 328 ~~---~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
.+ ..++|||+.|||++.+|+.+++ ..|||+|++||+++..++.
T Consensus 329 ~~~~~~~~ipvia~GGi~~~~di~kal-~~GA~~v~vG~~~~~~~e~ 374 (491)
T 1zfj_A 329 AAVAREYGKTIIADGGIKYSGDIVKAL-AAGGNAVMLGSMFAGTDEA 374 (491)
T ss_dssp HHHHHHTTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTTTBSSC
T ss_pred HHHHhhcCCCEEeeCCCCCHHHHHHHH-HcCCcceeeCHHhhCCCcC
Confidence 65 4689999999999999999999 6899999999999976553
No 126
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=98.30 E-value=7.7e-06 Score=83.48 Aligned_cols=136 Identities=14% Similarity=0.093 Sum_probs=106.3
Q ss_pred CCeeeeeccCCHHHHHHHHHhhC-CcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeec
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRI 280 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~-~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~ 280 (487)
.|+...+.+.+++++.+.++.+. +.++.|.+++|++ +++...+.++++++++ ++++.+...-
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan~ 194 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDANQ 194 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 45555555568888877766554 4589999988761 4566677888888877 5788887766
Q ss_pred ccccccHHHHHHHHHH--cCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 281 YQDVNKTVEYARMLER--AGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~--~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
+++.++..++++.+++ +|++.|- | + . .+.+++..+++++.+++||++.+.+.+.+++.++++...+|.
T Consensus 195 ~~~~~~a~~~~~~l~~~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~ 264 (366)
T 1tkk_A 195 GWRPKEAVTAIRKMEDAGLGIELVE-------Q-P-V-HKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADL 264 (366)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEEEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSE
T ss_pred CCCHHHHHHHHHHHhhcCCCceEEE-------C-C-C-CcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCE
Confidence 7788888999999999 8887663 2 1 2 345899999999999999999999999999999998788999
Q ss_pred EEeccc
Q psy7343 359 VMTAEG 364 (487)
Q Consensus 359 VmiGRa 364 (487)
|++--.
T Consensus 265 v~ik~~ 270 (366)
T 1tkk_A 265 INIKLM 270 (366)
T ss_dssp EEECHH
T ss_pred EEeehh
Confidence 998543
No 127
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=98.29 E-value=5.6e-06 Score=84.61 Aligned_cols=205 Identities=13% Similarity=0.133 Sum_probs=105.7
Q ss_pred hhcCCCceEEecCCCCCCHHH------HHHHHHcCCCeEEccceec--cccccCcHHHHHHhhhCCCCCceeeeeccccC
Q psy7343 74 TQLGSPRFILAPMVDASELPW------RLLSRRYGSHLCYTPMVSA--HQFIADKKLRQEILMSTPEDRPLIIQRTIFPR 145 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~td~pF------R~l~~~~Gadl~~TEMi~a--~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~ 145 (487)
.++ +.|+++|||.|.|+.++ |.+|+++|+.+..+||..+ +.-+..+.+..+ ...| +.|++..+...
T Consensus 56 ~~l-~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr--~~ap-~~~~~anlg~~-- 129 (368)
T 3vkj_A 56 KEI-SVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVR--KVAP-TIPIIANLGMP-- 129 (368)
T ss_dssp EEE-SSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHH--HHCS-SSCEEEEEEGG--
T ss_pred Eec-cCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHH--HhCc-CcceecCcCee--
Confidence 344 66899999999999995 9999999999999999765 443333332222 2233 33443332110
Q ss_pred CCCCccccccccCCCchHHHHHHHHhCCccceeccccchhhh-c--Chh---HHHHHHh--cCCCCCCeeeeecc--CCH
Q psy7343 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFI-A--DKK---LRQEILM--STPEDRPLIIQFCG--NDS 215 (487)
Q Consensus 146 ~g~~~~~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll-~--~~~---~~~~~l~--~~~~~~Pv~Vqi~g--~d~ 215 (487)
. +++ +......+......+++...--........ . +.+ ...+.++ ....+.||++|..| .++
T Consensus 130 ----q--l~~--~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~ 201 (368)
T 3vkj_A 130 ----Q--LVK--GYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISM 201 (368)
T ss_dssp ----G--GGT--TCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCH
T ss_pred ----e--cCC--CCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCH
Confidence 0 000 011111222222223322110011111111 0 110 1222332 23347899999654 333
Q ss_pred HHHHHHHHhhCCc-CcEEEee--cCCCcc-e--eec-c------CccccccCCh-----HHHHHHHHHHhhhc-cCcEEE
Q psy7343 216 KNLTEAAKLAEPH-CDGIDIN--IGCPQM-V--AKR-G------HYGAYLQDDW-----PLLTNLVSSLRQAV-QVPVSC 276 (487)
Q Consensus 216 ~~~~~aa~~~~~~-~d~IdiN--~GcP~~-i--~~~-g------r~G~~l~~d~-----~~i~eiv~~v~~~~-~iPV~v 276 (487)
+.|+.++++ +|+|++. .|-+.. + .+. + ..+ ....+| ..+.+ +++.+ ++||++
T Consensus 202 ----~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~-~~~~~~g~pt~~~l~~----v~~~~~~ipvia 272 (368)
T 3vkj_A 202 ----ETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESA-KNFLDWGVPTAASIME----VRYSVPDSFLVG 272 (368)
T ss_dssp ----HHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHH-HHTTTCSCBHHHHHHH----HHHHSTTCEEEE
T ss_pred ----HHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhc-cccccccccHHHHHHH----HHHHcCCCcEEE
Confidence 345555555 7888873 221000 0 010 0 000 111233 23333 44455 499999
Q ss_pred EeecccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 277 KIRIYQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 277 KiR~~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
.+ ++.+..++++.+. .|+|+|++ ||
T Consensus 273 ~G----GI~~~~d~~kal~-lGA~~v~i-g~ 297 (368)
T 3vkj_A 273 SG----GIRSGLDAAKAIA-LGADIAGM-AL 297 (368)
T ss_dssp ES----SCCSHHHHHHHHH-HTCSEEEE-CH
T ss_pred EC----CCCCHHHHHHHHH-cCCCEEEE-cH
Confidence 97 7888999999888 69999999 76
No 128
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.29 E-value=9.6e-06 Score=84.74 Aligned_cols=100 Identities=14% Similarity=0.187 Sum_probs=69.2
Q ss_pred CCC-eeeeecc-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceee---ccCccc-cccCChHHHHHHHHHHhhhc--cCc
Q psy7343 203 DRP-LIIQFCG-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAK---RGHYGA-YLQDDWPLLTNLVSSLRQAV--QVP 273 (487)
Q Consensus 203 ~~P-v~Vqi~g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~---~gr~G~-~l~~d~~~i~eiv~~v~~~~--~iP 273 (487)
+.| |+|||.. .+.+++.++|+.++++ .|+|.++.+....... ....|+ .....++...+++..+++.+ ++|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 578 9999994 5667888899988877 8888876543211100 001111 11112334567788888888 899
Q ss_pred EEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 274 VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 274 V~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
|++.+ ++.+..++.+.+. +|||.|++ ||.
T Consensus 376 VIg~G----GI~s~~DA~e~l~-aGAd~Vqi-gra 404 (443)
T 1tv5_A 376 IIASG----GIFSGLDALEKIE-AGASVCQL-YSC 404 (443)
T ss_dssp EEEES----SCCSHHHHHHHHH-TTEEEEEE-SHH
T ss_pred EEEEC----CCCCHHHHHHHHH-cCCCEEEE-cHH
Confidence 99998 7888999888886 79999999 774
No 129
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.29 E-value=5.6e-06 Score=85.38 Aligned_cols=132 Identities=10% Similarity=0.158 Sum_probs=104.7
Q ss_pred cCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 212 GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 212 g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
+.+++++.+.++.+.+ .|+.|.|+.|.. .++...++++++++++ ++++.+...-+++.++..
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 211 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTK 211 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHH
Confidence 4688888887776544 489999886630 1466778888898877 688888877778888899
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
++++.++++|++.|- + + + ...+++..+++++.+++||++.+.+.+.++++++++...+|.|++-...++.
T Consensus 212 ~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 281 (391)
T 2qgy_A 212 SFLKEVSSFNPYWIE-------E-P-V-DGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGG 281 (391)
T ss_dssp HHHHHHGGGCCSEEE-------C-S-S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSC
T ss_pred HHHHHHHhcCCCeEe-------C-C-C-ChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCC
Confidence 999999999999874 1 1 2 2357999999999999999999999999999999987789999875443333
No 130
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.28 E-value=5.5e-06 Score=81.22 Aligned_cols=151 Identities=15% Similarity=0.131 Sum_probs=94.5
Q ss_pred CCHHHHHHHHHhhCCcCcEEEeecCCCcceee-ccCcc-----ccc--cCChHHHHHHHHHHhhhccCcEEEEeecc-cc
Q psy7343 213 NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAK-RGHYG-----AYL--QDDWPLLTNLVSSLRQAVQVPVSCKIRIY-QD 283 (487)
Q Consensus 213 ~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~-~gr~G-----~~l--~~d~~~i~eiv~~v~~~~~iPV~vKiR~~-~d 283 (487)
.+.+...+.++.+++..|.||| |-|..-.. +|..= .++ --+.+.+.++++++++.+++||++-+-.+ ..
T Consensus 27 P~~~~~~~~~~~l~~~aD~IEl--G~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~ 104 (271)
T 1ujp_A 27 PSREGFLQAVEEVLPYADLLEI--GLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVL 104 (271)
T ss_dssp SCHHHHHHHHHHHGGGCSSEEE--ECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHH
T ss_pred CChHHHHHHHHHHHhcCCEEEE--CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHH
Confidence 3556777777766555999999 44432110 11000 000 02456677889999988899999842111 01
Q ss_pred cccHHHHHHHHHHcCCcEEEEEc-------------------------c-ccC-----------------CCCCCCCC--
Q psy7343 284 VNKTVEYARMLERAGCQLLAVHG-------------------------R-TVD-----------------QRGMNTGL-- 318 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~Vhg-------------------------R-t~~-----------------~~g~~~g~-- 318 (487)
.....++++.+.++|+|++++-. - +.. ...+++|.
T Consensus 105 ~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~TG~~~ 184 (271)
T 1ujp_A 105 AWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSVTGVTGMRE 184 (271)
T ss_dssp HHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCSCEEEECC--------
T ss_pred HhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcccCCCC
Confidence 11346777777778888776511 0 000 00012232
Q ss_pred ----CCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 319 ----ASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 319 ----~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
...+.++++++..++||++.|||+|++++.++ .|||+|++|+++...
T Consensus 185 ~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~---~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 185 RLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA---AVADGVVVGSALVRA 235 (271)
T ss_dssp ----CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH---TTSSEEEECHHHHHH
T ss_pred CCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh---cCCCEEEEChHHhcc
Confidence 12578999999999999999999999999996 689999999987654
No 131
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.28 E-value=6.6e-07 Score=85.76 Aligned_cols=85 Identities=24% Similarity=0.375 Sum_probs=71.3
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
++..+.++.+++.|+|+|.++...... ......++.++++++.+++||+++|+|.+++++++++ +.|||+|++|+.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~---~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~-~~Gad~V~i~~~ 108 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP---EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLF-RAGADKVSVNTA 108 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT---TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc---cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEEChH
Confidence 478899999999999999997654322 1122357889999999999999999999999999988 689999999999
Q ss_pred cccCccccc
Q psy7343 365 NLYNPALFT 373 (487)
Q Consensus 365 ~l~~P~lf~ 373 (487)
++.+|+++.
T Consensus 109 ~~~~~~~~~ 117 (253)
T 1h5y_A 109 AVRNPQLVA 117 (253)
T ss_dssp HHHCTHHHH
T ss_pred HhhCcHHHH
Confidence 999998764
No 132
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.27 E-value=9.1e-07 Score=84.91 Aligned_cols=83 Identities=24% Similarity=0.263 Sum_probs=70.8
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
+..++++.+++.|+|.|.++....... ..... +.++++++.+++|++++|+|.++++++.++ +.|||+|++|+++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~---~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l-~~Gad~V~lg~~~ 106 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFG---RGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAAL-ATGCARVNVGTAA 106 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTT---SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccccc---CCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHH-HcCCCEEEECchH
Confidence 678899999999999999976543322 12334 889999999999999999999999999999 6899999999999
Q ss_pred ccCccccc
Q psy7343 366 LYNPALFT 373 (487)
Q Consensus 366 l~~P~lf~ 373 (487)
+.+|+++.
T Consensus 107 l~~p~~~~ 114 (244)
T 2y88_A 107 LENPQWCA 114 (244)
T ss_dssp HHCHHHHH
T ss_pred hhChHHHH
Confidence 99997764
No 133
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.26 E-value=1.3e-05 Score=84.40 Aligned_cols=128 Identities=23% Similarity=0.263 Sum_probs=88.2
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYAR 292 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~ 292 (487)
.++.+..+..+++...|.|-|... || +-+.+.+.++.+++.. +++|++- ++ .+.+.++
T Consensus 279 ~~d~~eR~~aLv~AGvD~iviD~a-------hG--------hs~~v~~~i~~ik~~~p~~~viaG-----NV-aT~e~a~ 337 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVLDSS-------QG--------NSVYQIEFIKWIKQTYPKIDVIAG-----NV-VTREQAA 337 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECCS-------CC--------CSHHHHHHHHHHHHHCTTSEEEEE-----EE-CSHHHHH
T ss_pred CccHHHHHHHHHhcCCcEEEEecc-------cc--------ccHHHHHHHHHHHhhCCcceEEec-----cc-cCHHHHH
Confidence 455666666666655676655432 22 2455667788888776 6777763 23 4457778
Q ss_pred HHHHcCCcEEEEEccc-------cCCCCCCCCCCCHHHHHHHH---hhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 293 MLERAGCQLLAVHGRT-------VDQRGMNTGLASWEHITAVR---KALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 293 ~le~~G~d~I~VhgRt-------~~~~g~~~g~~~~~~i~~i~---~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
.|.++|+|+|.| |-+ +...| -|.+....+.++. +..++|||+.|||++.-|+.+.+ ..|||.||+|
T Consensus 338 ~Li~aGAD~vkV-GiGpGSiCtTr~v~G--vG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAl-aaGAd~VMlG 413 (556)
T 4af0_A 338 QLIAAGADGLRI-GMGSGSICITQEVMA--VGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKAL-ALGASAVMMG 413 (556)
T ss_dssp HHHHHTCSEEEE-CSSCSTTBCCTTTCC--SCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEES
T ss_pred HHHHcCCCEEee-cCCCCcccccccccC--CCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHh-hcCCCEEEEc
Confidence 888999999999 643 22221 2344555555554 44689999999999999999999 7999999999
Q ss_pred cccc
Q psy7343 363 EGNL 366 (487)
Q Consensus 363 Ra~l 366 (487)
.-|-
T Consensus 414 sllA 417 (556)
T 4af0_A 414 GLLA 417 (556)
T ss_dssp TTTT
T ss_pred hhhc
Confidence 7544
No 134
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.24 E-value=6e-06 Score=85.22 Aligned_cols=102 Identities=22% Similarity=0.398 Sum_probs=80.3
Q ss_pred ChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCC-CCHHHHHHHHhhCCC
Q psy7343 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL-ASWEHITAVRKALTI 333 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~-~~~~~i~~i~~~~~i 333 (487)
|++.+.++++.+++. +++++++++. ....+.++.+++.|+|.+.+|++...+. +.++ ..|+.+.++++.+++
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~----~~~~e~a~~~~~agad~i~i~~~~~~~~--~~~~~~~~~~i~~l~~~~~~ 212 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSP----QNVREIAPIVIKAGADLLVIQGTLISAE--HVNTGGEALNLKEFIGSLDV 212 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECT----TTHHHHHHHHHHTTCSEEEEECSSCCSS--CCCC-----CHHHHHHHCSS
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCC----ccHHHHHHHHHHCCCCEEEEeCCccccc--cCCCcccHHHHHHHHHhcCC
Confidence 788888999988876 8999998842 3567788888899999999997753222 2222 267778999999999
Q ss_pred cEEEcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 334 PVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 334 PVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
||++ |||.|.++++.++ +.|||+|++|+|.
T Consensus 213 pvi~-ggi~t~e~a~~~~-~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 213 PVIA-GGVNDYTTALHMM-RTGAVGIIVGGGE 242 (393)
T ss_dssp CEEE-ECCCSHHHHHHHH-TTTCSEEEESCCS
T ss_pred CEEE-CCcCCHHHHHHHH-HcCCCEEEECCCc
Confidence 9999 8999999999998 7999999999854
No 135
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=98.24 E-value=1.6e-06 Score=88.13 Aligned_cols=127 Identities=14% Similarity=0.077 Sum_probs=80.9
Q ss_pred ceeccccchhhhcChhHHHHHHhc--CCCCCCeeeeec-cCCHHHHHHHHHhhCCc--CcEEEe-ec---------CCCc
Q psy7343 176 CYTPMVSAHQFIADKKLRQEILMS--TPEDRPLIIQFC-GNDSKNLTEAAKLAEPH--CDGIDI-NI---------GCPQ 240 (487)
Q Consensus 176 ~~t~~v~~~~Ll~~~~~~~~~l~~--~~~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~--~d~Idi-N~---------GcP~ 240 (487)
||... .+..|.++++.+.++++. ...+.||+|||+ +.|.+++.++++.++++ .|+|-+ |- -...
T Consensus 165 CPn~~-gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~ 243 (354)
T 4ef8_A 165 CPNVP-GKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETES 243 (354)
T ss_dssp SCCST-TSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTE
T ss_pred CCCCC-CchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCc
Confidence 66443 256777888888888752 334689999999 56777888888877664 566643 10 0000
Q ss_pred ceee-ccCccc-cccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 241 MVAK-RGHYGA-YLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 241 ~i~~-~gr~G~-~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
.... ...+|+ ....-...-.+++..+++.. ++||++++ ++.+..++.+.+. +|||+|+| ||..
T Consensus 244 ~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~G----GI~s~~da~~~l~-aGAd~V~v-gra~ 309 (354)
T 4ef8_A 244 VVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCG----GVYTGEDAFLHVL-AGASMVQV-GTAL 309 (354)
T ss_dssp ESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEES----CCCSHHHHHHHHH-HTEEEEEE-CHHH
T ss_pred cccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEEC----CcCCHHHHHHHHH-cCCCEEEE-hHHH
Confidence 0000 011121 11112234455666677666 69999998 8889999998885 89999999 8854
No 136
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.23 E-value=4.8e-06 Score=80.40 Aligned_cols=116 Identities=15% Similarity=0.217 Sum_probs=80.4
Q ss_pred cccccCChHHHHHHHHHHhhh-ccCcEEEEee----c---cc---ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCC
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQA-VQVPVSCKIR----I---YQ---DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG 317 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~-~~iPV~vKiR----~---~~---d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g 317 (487)
++....+|+++.++.+..-.. +-+-+.++.+ + +| ...+..++++.+++.|+..|.++.-.+... ..|
T Consensus 104 ~t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt--~~G 181 (243)
T 4gj1_A 104 GSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGT--MQG 181 (243)
T ss_dssp CTTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC-------C
T ss_pred ccccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeeeeccccc--ccC
Confidence 344457899999987765322 1111222111 1 12 123678999999999999999965444332 334
Q ss_pred CCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCc
Q psy7343 318 LASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 318 ~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P 369 (487)
.+.+.++++.+.+ ++|||++||+.+.+|++++ ..+++||.+|++++.+-
T Consensus 182 -~d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l--~~~~~gvivg~Al~~g~ 231 (243)
T 4gj1_A 182 -VNVRLYKLIHEIFPNICIQASGGVASLKDLENL--KGICSGVIVGKALLDGV 231 (243)
T ss_dssp -CCHHHHHHHHHHCTTSEEEEESCCCSHHHHHHT--TTTCSEEEECHHHHTTS
T ss_pred -CCHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHH--HccCchhehHHHHHCCC
Confidence 6899999999887 7999999999999999886 35799999999987653
No 137
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=98.23 E-value=1.7e-05 Score=80.02 Aligned_cols=180 Identities=16% Similarity=0.095 Sum_probs=106.9
Q ss_pred CCceEEecCCCCCCHHHHHHHHHcCC-CeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCccccccc
Q psy7343 78 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPM 156 (487)
Q Consensus 78 ~~~~~LAPMag~td~pFR~l~~~~Ga-dl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lApm 156 (487)
+.++++|||.|+|+..|+..+.+.|+ +++++++++.+.+...-+...+. .+.|+.+|+... ++.
T Consensus 12 ~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~-----~~~p~gvnl~~~----~~~------ 76 (332)
T 2z6i_A 12 DYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSL-----TDKPFGVNIMLL----SPF------ 76 (332)
T ss_dssp SSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHHHHH-----CCSCEEEEECTT----STT------
T ss_pred CCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHh-----cCCCEEEEecCC----CCC------
Confidence 56799999999999999999999997 89999998877663222222221 257899996321 110
Q ss_pred cCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEee
Q psy7343 157 VDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDIN 235 (487)
Q Consensus 157 a~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN 235 (487)
. ...-.++.+.|++.+-.... .+....+.++. .+.|+++++. +.+. ++.+++. .|+|.+.
T Consensus 77 --~--~~~~~~a~~~g~d~V~~~~g-------~p~~~i~~l~~--~g~~v~~~v~--~~~~----a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 77 --V--EDIVDLVIEEGVKVVTTGAG-------NPSKYMERFHE--AGIIVIPVVP--SVAL----AKRMEKIGADAVIAE 137 (332)
T ss_dssp --H--HHHHHHHHHTTCSEEEECSS-------CGGGTHHHHHH--TTCEEEEEES--SHHH----HHHHHHTTCSCEEEE
T ss_pred --H--HHHHHHHHHCCCCEEEECCC-------ChHHHHHHHHH--cCCeEEEEeC--CHHH----HHHHHHcCCCEEEEE
Confidence 0 11234556678766443221 12222222322 2578888873 3322 3333333 7777775
Q ss_pred cCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 236 IGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 236 ~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
|... .|..| . ..++++ +..+++.+++||++.+ .+.+..++.+.+. .|+|+|.+ ||.
T Consensus 138 -g~~~----GG~~g-~-~~~~~l----l~~i~~~~~iPViaaG----GI~~~~~~~~al~-~GAdgV~v-Gs~ 193 (332)
T 2z6i_A 138 -GMEA----GGHIG-K-LTTMTL----VRQVATAISIPVIAAG----GIADGEGAAAGFM-LGAEAVQV-GTR 193 (332)
T ss_dssp -CTTS----SEECC-S-SCHHHH----HHHHHHHCSSCEEEES----SCCSHHHHHHHHH-TTCSEEEE-CHH
T ss_pred -CCCC----CCCCC-C-ccHHHH----HHHHHHhcCCCEEEEC----CCCCHHHHHHHHH-cCCCEEEe-cHH
Confidence 2210 01111 1 123444 4456666789999998 5556677766665 79999999 764
No 138
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.23 E-value=4.6e-07 Score=92.69 Aligned_cols=126 Identities=13% Similarity=0.162 Sum_probs=86.2
Q ss_pred ceeccccchhhhcChhHHHHHHhcC---------CCCCCeeeeec-cCCHHHHHHHHHhhCCc-CcEEEeecCC---Ccc
Q psy7343 176 CYTPMVSAHQFIADKKLRQEILMST---------PEDRPLIIQFC-GNDSKNLTEAAKLAEPH-CDGIDINIGC---PQM 241 (487)
Q Consensus 176 ~~t~~v~~~~Ll~~~~~~~~~l~~~---------~~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~-~d~IdiN~Gc---P~~ 241 (487)
||... +.+++++++...++++.. ..+.||+||++ +.+.+++.++|+.++++ +|+|-++-.. +..
T Consensus 186 CPn~~--G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~ 263 (367)
T 3zwt_A 186 SPNTA--GLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAG 263 (367)
T ss_dssp CTTST--TGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTT
T ss_pred CCCCC--CccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccc
Confidence 55433 556788888777776421 14689999999 45677888999998887 8888765322 110
Q ss_pred ee-e-ccCccc-cccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 242 VA-K-RGHYGA-YLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 242 i~-~-~gr~G~-~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
.. . ....|+ .....+....+++..+++.+ ++||++.+ ++.+..++.+.++ +|+|+|+| ||..
T Consensus 264 ~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~G----GI~s~~da~~~l~-~GAd~V~v-gra~ 330 (367)
T 3zwt_A 264 LQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVG----GVSSGQDALEKIR-AGASLVQL-YTAL 330 (367)
T ss_dssp CCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEES----SCCSHHHHHHHHH-HTCSEEEE-SHHH
T ss_pred cccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEEC----CCCCHHHHHHHHH-cCCCEEEE-CHHH
Confidence 00 0 001111 12334556667888888888 89999998 7888999888886 89999999 8853
No 139
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.22 E-value=1.1e-06 Score=84.39 Aligned_cols=83 Identities=25% Similarity=0.273 Sum_probs=70.6
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
+..++++.+++.|+|.|.++....... ....+ +.++++++.+++|++++|+|.++++++.++ +.|||+|.+|+.+
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~---~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l-~~Gad~V~lg~~~ 107 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG---TGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAAL-ATGCTRVNLGTAA 107 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT---SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc---CCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHH-HcCCCEEEECchH
Confidence 688899999999999999976543221 12345 889999999999999999999999999999 6899999999999
Q ss_pred ccCccccc
Q psy7343 366 LYNPALFT 373 (487)
Q Consensus 366 l~~P~lf~ 373 (487)
+.||+++.
T Consensus 108 l~~p~~~~ 115 (244)
T 1vzw_A 108 LETPEWVA 115 (244)
T ss_dssp HHCHHHHH
T ss_pred hhCHHHHH
Confidence 99997764
No 140
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.22 E-value=7.9e-06 Score=76.57 Aligned_cols=105 Identities=20% Similarity=0.231 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcE
Q psy7343 257 PLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPV 335 (487)
Q Consensus 257 ~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPV 335 (487)
+.+.++++.+++. ++++.+-+ .+..+..+.++.+.+.|+|.|.++.....+. .+...++.++++++.+ ++||
T Consensus 90 ~~~~~~~~~~~~~-g~~~~v~~---~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~---~~~~~~~~i~~l~~~~~~~~i 162 (211)
T 3f4w_A 90 LTIQSCIRAAKEA-GKQVVVDM---ICVDDLPARVRLLEEAGADMLAVHTGTDQQA---AGRKPIDDLITMLKVRRKARI 162 (211)
T ss_dssp HHHHHHHHHHHHH-TCEEEEEC---TTCSSHHHHHHHHHHHTCCEEEEECCHHHHH---TTCCSHHHHHHHHHHCSSCEE
T ss_pred hHHHHHHHHHHHc-CCeEEEEe---cCCCCHHHHHHHHHHcCCCEEEEcCCCcccc---cCCCCHHHHHHHHHHcCCCcE
Confidence 4456666666654 66666532 1344667888889999999998863211111 1223678999999986 8999
Q ss_pred EEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 336 IANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 336 i~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
++.|||+ .+++.+++ +.|||+|.+||+++..++
T Consensus 163 ~~~gGI~-~~~~~~~~-~~Gad~vvvGsai~~~~d 195 (211)
T 3f4w_A 163 AVAGGIS-SQTVKDYA-LLGPDVVIVGSAITHAAD 195 (211)
T ss_dssp EEESSCC-TTTHHHHH-TTCCSEEEECHHHHTCSS
T ss_pred EEECCCC-HHHHHHHH-HcCCCEEEECHHHcCCCC
Confidence 9999996 99999999 789999999999887654
No 141
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.21 E-value=1.3e-05 Score=77.33 Aligned_cols=145 Identities=12% Similarity=0.113 Sum_probs=94.5
Q ss_pred CCCeeeeecc-CCHHHHHHHHHhhCCc--CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEee
Q psy7343 203 DRPLIIQFCG-NDSKNLTEAAKLAEPH--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIR 279 (487)
Q Consensus 203 ~~Pv~Vqi~g-~d~~~~~~aa~~~~~~--~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR 279 (487)
+.++-.+..| .+.++...++++..+. -+.| ++-+.+.. ..+..|+....+-.+.+.+. ++.|.-..
T Consensus 63 ~~~~lpntaG~~taeeAv~~a~lare~~gt~~i--------KlEvi~d~-~~l~pD~~~tv~aa~~L~k~-Gf~Vlpy~- 131 (268)
T 2htm_A 63 GVRLLPNTAGARTAEEAVRLARLGRLLTGERWV--------KLEVIPDP-TYLLPDPLETLKAAERLIEE-DFLVLPYM- 131 (268)
T ss_dssp TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEE--------BCCCCSCT-TTTCCCHHHHHHHHHHHHHT-TCEECCEE-
T ss_pred hhhccCcccCCCCHHHHHHHHHhhhHhcCccee--------eeeeccCc-cccCcCHHHHHHHHHHHHHC-CCEEeecc-
Confidence 5556666665 6788888888776554 1221 12222221 12455665555544444332 44333111
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHh-hCC-CcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRK-ALT-IPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~-~~~-iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
. ....+++.+++.|++.||--|.-- |.-.|..+.+.++.+++ ..+ +|||+.|||.|++|+..++ +.|||
T Consensus 132 ----~-~D~~~ak~l~~~G~~aVmPlg~pI---GsG~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~Am-eLGAd 202 (268)
T 2htm_A 132 ----G-PDLVLAKRLAALGTATVMPLAAPI---GSGWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVM-ELGLD 202 (268)
T ss_dssp ----C-SCHHHHHHHHHHTCSCBEEBSSST---TTCCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHH-HTTCC
T ss_pred ----C-CCHHHHHHHHhcCCCEEEecCccC---cCCcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHH-HcCCC
Confidence 1 223888999999999998744311 11224456788999998 678 9999999999999999999 79999
Q ss_pred EEEecccccc
Q psy7343 358 GVMTAEGNLY 367 (487)
Q Consensus 358 ~VmiGRa~l~ 367 (487)
+|.+|+++..
T Consensus 203 gVlVgSAI~~ 212 (268)
T 2htm_A 203 AVLVNTAIAE 212 (268)
T ss_dssp EEEESHHHHT
T ss_pred EEEEChHHhC
Confidence 9999999764
No 142
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.20 E-value=7.8e-06 Score=84.77 Aligned_cols=137 Identities=18% Similarity=0.232 Sum_probs=104.0
Q ss_pred CHHHHHHHHHhhC-CcCcEEEeec------CCC--cceeeccCcccccc-CChHHHHHHHHHHhhhc--cCcEEEEeecc
Q psy7343 214 DSKNLTEAAKLAE-PHCDGIDINI------GCP--QMVAKRGHYGAYLQ-DDWPLLTNLVSSLRQAV--QVPVSCKIRIY 281 (487)
Q Consensus 214 d~~~~~~aa~~~~-~~~d~IdiN~------GcP--~~i~~~gr~G~~l~-~d~~~i~eiv~~v~~~~--~iPV~vKiR~~ 281 (487)
+++++.+.++.+. +.|+.|.|+. |+. .....+ .+|+... ++.+...++++++++++ ++++.+...-+
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~-~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~ 228 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNR-NYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSL 228 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCG-GGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccc-cccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 7888887776554 4599999996 541 111122 3455442 35677788999999887 57788776556
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++..++++.++++|++.|-- + . ...+++..+++++.+++||++.+.+.+.++++++++...+|.|++
T Consensus 229 ~~~~~ai~~~~~l~~~~i~~iE~--------P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 298 (410)
T 2gl5_A 229 LGTNSAIQFAKAIEKYRIFLYEE--------P-I-HPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQP 298 (410)
T ss_dssp SCHHHHHHHHHHHGGGCEEEEEC--------S-S-CSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECC
T ss_pred CCHHHHHHHHHHHHhcCCCeEEC--------C-C-ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 77788899999999999887642 1 1 235799999999999999999999999999999997777898875
No 143
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.19 E-value=2.9e-06 Score=82.51 Aligned_cols=86 Identities=16% Similarity=0.143 Sum_probs=70.3
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
.++.++++.+++.|++.|.++....... .. ..+++.++++++.+++||+++|+|.+.+++.+++ +.|||+|++|+.
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~--~~-g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~-~~Gad~v~lg~~ 105 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGT--KS-GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADKALAASV 105 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSC--SS-CCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHH-HHTCSEEECCCC
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccC--CC-cccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCcHhhhhHH
Confidence 3689999999999999999976544322 22 2578999999999999999999999999999999 689999999999
Q ss_pred cc-c--CcccccC
Q psy7343 365 NL-Y--NPALFTG 374 (487)
Q Consensus 365 ~l-~--~P~lf~~ 374 (487)
++ . +|..+.+
T Consensus 106 ~~~~~~~~~~~~~ 118 (266)
T 2w6r_A 106 FHFREIDMRELKE 118 (266)
T ss_dssp C------CHHHHH
T ss_pred HHhCCCCHHHHHH
Confidence 99 5 8877653
No 144
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.17 E-value=1.4e-05 Score=75.00 Aligned_cols=137 Identities=18% Similarity=0.166 Sum_probs=87.2
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEee-
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIR- 279 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR- 279 (487)
.+.|++..+++.|.+++.+.++.+.+. .+.|++...+|.. . +.++.+++..++++++..-
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~--------------~----~~i~~i~~~~~~~l~vg~g~ 66 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQW--------------E----QSIPAIVDAYGDKALIGAGT 66 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTH--------------H----HHHHHHHHHHTTTSEEEEEC
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhH--------------H----HHHHHHHHhCCCCeEEEecc
Confidence 357899999999999999988877665 7888877655321 0 1112222223333333110
Q ss_pred -------------------cc------------------cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHH
Q psy7343 280 -------------------IY------------------QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWE 322 (487)
Q Consensus 280 -------------------~~------------------~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~ 322 (487)
++ ....+..++ ....+.|+|.|.++.. ....++
T Consensus 67 ~~~~~~i~~a~~~Gad~V~~~~~~~~~~~~~~~~g~~~~~g~~t~~e~-~~a~~~G~d~v~v~~t---------~~~g~~ 136 (212)
T 2v82_A 67 VLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEA-FTALEAGAQALKIFPS---------SAFGPQ 136 (212)
T ss_dssp CCSHHHHHHHHHTTCCEEECSSCCHHHHHHHHHTTCEEECEECSHHHH-HHHHHTTCSEEEETTH---------HHHCHH
T ss_pred ccCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCCEEeecCCHHHH-HHHHHCCCCEEEEecC---------CCCCHH
Confidence 00 001122222 2334556666655211 112468
Q ss_pred HHHHHHhhCC--CcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 323 HITAVRKALT--IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 323 ~i~~i~~~~~--iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
.++++++.++ +||++.|||+ .+++.+++ +.|+++|.+|++++..
T Consensus 137 ~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~-~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 137 YIKALKAVLPSDIAVFAVGGVT-PENLAQWI-DAGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHHHTTSCTTCEEEEESSCC-TTTHHHHH-HHTCSEEEECTTTCCT
T ss_pred HHHHHHHhccCCCeEEEeCCCC-HHHHHHHH-HcCCCEEEEChHHhCC
Confidence 8889888885 9999999997 89999999 6899999999998875
No 145
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.15 E-value=1.5e-05 Score=82.40 Aligned_cols=133 Identities=18% Similarity=0.201 Sum_probs=102.6
Q ss_pred CCeeeeeccCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeec
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRI 280 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~ 280 (487)
.|+...+...+++.+.+.++.+.+ .|+.|.++.|. +++...++++++++++ ++++.+...-
T Consensus 135 vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan~ 198 (397)
T 2qde_A 135 IPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDING 198 (397)
T ss_dssp EEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECTT
T ss_pred cceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 344433333578888877765544 48888888663 4566677888888876 5788877655
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
+++.++..++++.++++|++.|- + + . ...+++..+++++.+++||++.+.+.+.++++++++...+|.|+
T Consensus 199 ~~~~~~a~~~~~~l~~~~i~~iE-------q-P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ 268 (397)
T 2qde_A 199 AWTYDQALTTIRALEKYNLSKIE-------Q-P-L-PAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLM 268 (397)
T ss_dssp CCCHHHHHHHHHHHGGGCCSCEE-------C-C-S-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEE-------C-C-C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEE
Confidence 67778888999999999999774 1 1 1 23578999999999999999999999999999999777899998
Q ss_pred ec
Q psy7343 361 TA 362 (487)
Q Consensus 361 iG 362 (487)
+-
T Consensus 269 ik 270 (397)
T 2qde_A 269 IK 270 (397)
T ss_dssp EC
T ss_pred Ee
Confidence 73
No 146
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.14 E-value=6.4e-06 Score=77.38 Aligned_cols=85 Identities=18% Similarity=0.215 Sum_probs=72.3
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
.+..++++.+...|+..|.+++.+..+. ..|.. ++.++++++..++|||+.||+.+++++.+++ +.|+|+|++|++
T Consensus 130 ~~~~~~i~~~~~~~~~~vli~~~~~~g~--~~g~~-~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~-~~G~~~~~vg~a 205 (237)
T 3cwo_X 130 ILLRDWVVEVEKRGAGEILLTSIDRDGT--KSGYD-TEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADAALAASV 205 (237)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTC--CSCCC-HHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HHTCSEEEESHH
T ss_pred cCHHHHHHHHhhcCCCeEEEEecCCCCc--ccccc-HHHHHHHHHhcCCCEEecCCCCCHHHHHHHH-HcCcHHHhhhHH
Confidence 3678888999999999898888633322 34443 8899999999999999999999999999999 589999999999
Q ss_pred cccCccccc
Q psy7343 365 NLYNPALFT 373 (487)
Q Consensus 365 ~l~~P~lf~ 373 (487)
++.+|+.+.
T Consensus 206 ~~~~~~~~~ 214 (237)
T 3cwo_X 206 FHFREIDVR 214 (237)
T ss_dssp HHTTSSCHH
T ss_pred HHcCCCCHH
Confidence 999998875
No 147
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.14 E-value=1.3e-05 Score=82.67 Aligned_cols=124 Identities=15% Similarity=0.160 Sum_probs=99.8
Q ss_pred CHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHH
Q psy7343 214 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 214 d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~ 290 (487)
+++++.+.++.+.+ .|+.|.|+.|. .+++...++++++++++ ++++.+...-+++.++..++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~ 226 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRM 226 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHH
Confidence 78888887776544 48999888663 14667778888898886 57888876666777888999
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
++.++++|++.|- + + . ...+++..+++++.+++||++.+.+.+.++++++++...+|.|++-
T Consensus 227 ~~~l~~~~i~~iE-------~-P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 288 (393)
T 2og9_A 227 CRIFEPFNLVWIE-------E-P-L-DAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPD 288 (393)
T ss_dssp HHHHGGGCCSCEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHhhCCCEEE-------C-C-C-CcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeC
Confidence 9999999999874 2 1 2 2357899999999999999999999999999999977779988763
No 148
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.12 E-value=6.3e-06 Score=84.95 Aligned_cols=140 Identities=6% Similarity=0.078 Sum_probs=104.1
Q ss_pred cCCHHHHHHHHHhh-CCcCcEEEeecCCCcce--eeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeeccccccc
Q psy7343 212 GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMV--AKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNK 286 (487)
Q Consensus 212 g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i--~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~ 286 (487)
..+++++.+.++.+ ++.|+.|.|+.||.... ...-.||+....+.+...++++++++++ ++++.+...-+++.++
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~ 214 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDE 214 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH
Confidence 35788887776655 44599999998863210 0001123333345677788999999887 5778877655677788
Q ss_pred HHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 287 TVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 287 ~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
..++++.++++|++.|-- + . ...+++..+++++.+++||++.+.+.|.++++++++...+|.|++
T Consensus 215 a~~~~~~l~~~~i~~iE~--------P-~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 279 (392)
T 2poz_A 215 TIRFCRKIGELDICFVEE--------P-C-DPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQP 279 (392)
T ss_dssp HHHHHHHHGGGCEEEEEC--------C-S-CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECC
T ss_pred HHHHHHHHHhcCCCEEEC--------C-C-CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 899999999999887631 1 1 235799999999999999999999999999999997667898876
No 149
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.10 E-value=2.1e-05 Score=81.69 Aligned_cols=141 Identities=8% Similarity=0.037 Sum_probs=108.4
Q ss_pred CCCeeee-eccCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEe
Q psy7343 203 DRPLIIQ-FCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKI 278 (487)
Q Consensus 203 ~~Pv~Vq-i~g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKi 278 (487)
..|+-.. +...+++.+.+.++.+ +..++.|.|++|+... . |+ ++++...+.++++|+++ ++++.+..
T Consensus 167 ~v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~---d---g~---~~~~~die~v~avReavG~d~~L~vDa 237 (412)
T 3stp_A 167 RIPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK---D---GM---PGMRENLKRVEAVREVIGYDNDLMLEC 237 (412)
T ss_dssp SEEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG---G---HH---HHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc---c---cc---chHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 4455554 3346889998877765 4459999999988311 1 11 34566778888899887 57888877
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
.-+++..+..++++.+++.|++.|-- + . .+.+++..+++++.+++||++.+.+.+..++.++++...+|.
T Consensus 238 N~~~~~~~Ai~~~~~Le~~~i~~iEe--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~ 307 (412)
T 3stp_A 238 YMGWNLDYAKRMLPKLAPYEPRWLEE--------P-V-IADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSV 307 (412)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEEC--------C-S-CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEC--------C-C-CcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCE
Confidence 66788888999999999999998842 1 2 234789999999999999999999999999999997777899
Q ss_pred EEec
Q psy7343 359 VMTA 362 (487)
Q Consensus 359 VmiG 362 (487)
|++-
T Consensus 308 v~ik 311 (412)
T 3stp_A 308 LQYD 311 (412)
T ss_dssp ECCC
T ss_pred EecC
Confidence 8754
No 150
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.10 E-value=6e-05 Score=73.73 Aligned_cols=138 Identities=14% Similarity=0.086 Sum_probs=97.7
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY 281 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~ 281 (487)
.+.||..|=+..|+.+..++. ...+|+|=|...+ + +.+.+.++++..++ .+..+.+-+
T Consensus 119 v~lPVl~Kdfi~d~~qi~ea~---~~GAD~VlLi~a~--------------L-~~~~l~~l~~~a~~-lGl~~lvev--- 176 (272)
T 3tsm_A 119 CSLPALRKDFLFDPYQVYEAR---SWGADCILIIMAS--------------V-DDDLAKELEDTAFA-LGMDALIEV--- 176 (272)
T ss_dssp SSSCEEEESCCCSTHHHHHHH---HTTCSEEEEETTT--------------S-CHHHHHHHHHHHHH-TTCEEEEEE---
T ss_pred cCCCEEECCccCCHHHHHHHH---HcCCCEEEEcccc--------------c-CHHHHHHHHHHHHH-cCCeEEEEe---
Confidence 468998886656666544332 2225555544332 1 35667777776654 477666655
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
.+..+ ++.+.+.|++.|-+.+|.-.. -..+++...++.+.+ ++|+|+-|||.|++|+.++. +.|+|+|
T Consensus 177 ---h~~eE-l~~A~~~ga~iIGinnr~l~t-----~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~-~~Ga~gv 246 (272)
T 3tsm_A 177 ---HDEAE-MERALKLSSRLLGVNNRNLRS-----FEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLE-KSGIGTF 246 (272)
T ss_dssp ---CSHHH-HHHHTTSCCSEEEEECBCTTT-----CCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHH-TTTCCEE
T ss_pred ---CCHHH-HHHHHhcCCCEEEECCCCCcc-----CCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHH-HcCCCEE
Confidence 23444 456668999999887774322 235788888888877 69999999999999999998 7999999
Q ss_pred EeccccccCccc
Q psy7343 360 MTAEGNLYNPAL 371 (487)
Q Consensus 360 miGRa~l~~P~l 371 (487)
.||.+++..++.
T Consensus 247 LVG~almr~~d~ 258 (272)
T 3tsm_A 247 LIGESLMRQHDV 258 (272)
T ss_dssp EECHHHHTSSCH
T ss_pred EEcHHHcCCcCH
Confidence 999999988765
No 151
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.09 E-value=5.2e-05 Score=72.18 Aligned_cols=143 Identities=14% Similarity=0.158 Sum_probs=88.7
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ 282 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~ 282 (487)
+.|+.|-+..+|++.+.+.+..+ ..|+|.+|.+. ..+.+.+.++.+++. ++.+.+-+
T Consensus 64 ~~~~~v~lmv~d~~~~i~~~~~a--gad~v~vH~~~----------------~~~~~~~~~~~i~~~-g~~igv~~---- 120 (228)
T 1h1y_A 64 KAYLDCHLMVTNPSDYVEPLAKA--GASGFTFHIEV----------------SRDNWQELIQSIKAK-GMRPGVSL---- 120 (228)
T ss_dssp CSEEEEEEESSCGGGGHHHHHHH--TCSEEEEEGGG----------------CTTTHHHHHHHHHHT-TCEEEEEE----
T ss_pred CCcEEEEEEecCHHHHHHHHHHc--CCCEEEECCCC----------------cccHHHHHHHHHHHc-CCCEEEEE----
Confidence 46788888888887665544332 24555555332 111113445555543 66666554
Q ss_pred ccccHHHHHHHHHHc--CCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 283 DVNKTVEYARMLERA--GCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 283 d~~~~~e~a~~le~~--G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
+..+..+..+.+.+. ++|.|.+........+..-....++.++++++.. ++||++.|||+. +++.+++ ..|+|++
T Consensus 121 ~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~~~~-~aGaD~v 198 (228)
T 1h1y_A 121 RPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGP-STIDVAA-SAGANCI 198 (228)
T ss_dssp CTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHHHHH-HHTCCEE
T ss_pred eCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHHHHH-HcCCCEE
Confidence 222333444555555 8999988443221111000112347788888888 899999999997 8888888 6799999
Q ss_pred EeccccccCcc
Q psy7343 360 MTAEGNLYNPA 370 (487)
Q Consensus 360 miGRa~l~~P~ 370 (487)
.+|++++..++
T Consensus 199 vvGsai~~~~d 209 (228)
T 1h1y_A 199 VAGSSIFGAAE 209 (228)
T ss_dssp EESHHHHTSSC
T ss_pred EECHHHHCCCC
Confidence 99999887654
No 152
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.09 E-value=1.6e-05 Score=76.07 Aligned_cols=129 Identities=19% Similarity=0.228 Sum_probs=88.7
Q ss_pred HHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc---cccccHHHHHHHH
Q psy7343 218 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY---QDVNKTVEYARML 294 (487)
Q Consensus 218 ~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~---~d~~~~~e~a~~l 294 (487)
..++...++...|.||+.+.. |.....|++.+.+-++++++.++- ..+|+-+. -+.++...+++..
T Consensus 98 v~Ea~~Ai~~GAdEIDmViNi----------g~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia 166 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVINI----------GMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKRC 166 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECCH----------HHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeeh----------HHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHHH
Confidence 345555666668999875332 222234788888888888887751 24444321 1334567777888
Q ss_pred HHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 295 ERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 295 e~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
.++|+|+|-.+ - |...+.+..+.++.+++.+ +++|.++|||+|.+|+.+++ +.||+.+....+
T Consensus 167 ~~aGADfVKTS-T-----Gf~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i-~aGA~riGtS~~ 231 (239)
T 3ngj_A 167 VAAGAEYVKTS-T-----GFGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMI-NNGASRIGASAG 231 (239)
T ss_dssp HHHTCSEEECC-C-----SSSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHH-HTTEEEEEESCH
T ss_pred HHHCcCEEECC-C-----CCCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHH-HhcccceecccH
Confidence 89999999762 1 1123557787787777765 68999999999999999999 799996665543
No 153
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.08 E-value=3.6e-05 Score=79.22 Aligned_cols=123 Identities=10% Similarity=0.027 Sum_probs=98.4
Q ss_pred CHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHH
Q psy7343 214 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 214 d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~ 290 (487)
+++++.+.++.+ ++.|+.|.|+.|+ .+++...++++++++++ ++++.+...-+++.++..++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~ 209 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTK 209 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHH
Confidence 788888777655 4458999998876 14566678888999987 57788776666787888999
Q ss_pred HHHHHH--cCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 291 ARMLER--AGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 291 a~~le~--~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
++.+++ .|++.|- | + + ...+++..+++++.+ ++||++.+.+ +.++++++++...+|.|++.
T Consensus 210 ~~~l~~~g~~i~~iE-------q-P-~-~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 210 LVAIREAGHDLLWVE-------D-P-I-LRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp HHHHHHTTCCCSEEE-------S-C-B-CTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHhcCCCceEEe-------C-C-C-CCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 999999 7777652 2 1 2 234799999999999 9999999999 99999999977789999997
No 154
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.06 E-value=3.7e-05 Score=74.92 Aligned_cols=152 Identities=14% Similarity=0.073 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeecc-Ccc-----ccc--cCChHHHHHHHHHHhhhc-cCcEEEEeeccc
Q psy7343 213 NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRG-HYG-----AYL--QDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQ 282 (487)
Q Consensus 213 ~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~g-r~G-----~~l--~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~ 282 (487)
.+.+...+.++.+++. .|.|||+ .|..-...+ ..= ..+ --+.+.+.++++++++.+ ++|+.+-+-...
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG--~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~ 105 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIG--FPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNP 105 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEE--CCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEEC--CCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcH
Confidence 4567888888888776 9999994 443210000 000 000 024566778899999888 899988321110
Q ss_pred -ccccHHHHHHHHHHcCCcEEEEEcc--------------------------ccC-----------------CCCCCCCC
Q psy7343 283 -DVNKTVEYARMLERAGCQLLAVHGR--------------------------TVD-----------------QRGMNTGL 318 (487)
Q Consensus 283 -d~~~~~e~a~~le~~G~d~I~VhgR--------------------------t~~-----------------~~g~~~g~ 318 (487)
.......+++.+.++|+|+++++.- +.. ...+.+|.
T Consensus 106 v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~ 185 (262)
T 2ekc_A 106 IFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGA 185 (262)
T ss_dssp HHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC----
T ss_pred HHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCC
Confidence 0112367778888888888876221 000 00011121
Q ss_pred C-------CHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 319 A-------SWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 319 ~-------~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
. ..+.++++++..++||+..|||.|++++.+ + ..|||+|++|+++...
T Consensus 186 ~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~-~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 186 REKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-I-GSFADGVVVGSALVKL 240 (262)
T ss_dssp -----CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-H-HTTSSEEEECHHHHHH
T ss_pred CCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-H-HcCCCEEEECHHHHhh
Confidence 1 136888999989999999999999999999 5 4689999999998765
No 155
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.06 E-value=1.2e-05 Score=78.25 Aligned_cols=78 Identities=18% Similarity=0.178 Sum_probs=66.4
Q ss_pred HHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 288 VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 288 ~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
..++...+..|...|-+-+.. ...+.+.++++++.+ ++||++.|||+|.+++++++ ..|||+|.+|+++
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~--------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll-~aGAD~VVVGSAa 259 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRN--------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYL-DSGADYVGFAGAL 259 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSS--------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHH-HTTCSEEEESGGG
T ss_pred HHHHHHHHHcCCCEEEEcCCC--------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHH-HcCCCEEEECchh
Confidence 567777788899988885321 235679999999999 89999999999999999999 6899999999999
Q ss_pred ccC--cccccC
Q psy7343 366 LYN--PALFTG 374 (487)
Q Consensus 366 l~~--P~lf~~ 374 (487)
+.| |.++++
T Consensus 260 v~d~~Pelv~e 270 (286)
T 3vk5_A 260 EQPDWRSALAE 270 (286)
T ss_dssp SSTTHHHHHHH
T ss_pred hcCCCHHHHHH
Confidence 999 777653
No 156
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.06 E-value=1.3e-05 Score=82.77 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=101.5
Q ss_pred CHHHHHHHHHhh-CCcCcEEEeec------CCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeeccccc
Q psy7343 214 DSKNLTEAAKLA-EPHCDGIDINI------GCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDV 284 (487)
Q Consensus 214 d~~~~~~aa~~~-~~~~d~IdiN~------GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~ 284 (487)
+++++.+.++.+ ++.|+.|.|+. |++.. ...+|....++.+...++++++++++ ++++.+...-+++.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~---s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~ 222 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREG---VFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDL 222 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTT---CCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccc---CcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH
Confidence 788888777655 44599999996 54211 11112111234566778899999877 57788776656777
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
++..++++.++++|++.|-- + + ...+++..+++++.+++||++.+.+.|.++++++++...+|.|++-
T Consensus 223 ~~ai~~~~~l~~~~i~~iE~--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 290 (403)
T 2ox4_A 223 VSAIQFAKAIEEFNIFFYEE--------I-N-TPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPD 290 (403)
T ss_dssp HHHHHHHHHHGGGCEEEEEC--------C-S-CTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHHHHhhCCCEEeC--------C-C-ChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 88899999999999887631 1 2 2357899999999999999999999999999999977779988763
No 157
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.05 E-value=7.8e-06 Score=102.23 Aligned_cols=193 Identities=14% Similarity=0.186 Sum_probs=117.4
Q ss_pred CCCCccccccccCCC-chHHHHHHHHhCC-ccceeccccchhhhcChhHHHHHHh----cCCCCCCeeeeeccCCHHHH-
Q psy7343 146 LGSPRFILAPMVDAS-ELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILM----STPEDRPLIIQFCGNDSKNL- 218 (487)
Q Consensus 146 ~g~~~~~lApma~~t-d~~fr~i~~~~Ga-~l~~t~~v~~~~Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~d~~~~- 218 (487)
+|..|++++||++.+ +..+-....|.|. +.. .+.+ +.+++...+.++ ....+.|+.|++.-.++...
T Consensus 425 lg~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l-----~~~g-~~~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~ 498 (3089)
T 3zen_D 425 TGRSPILLAGMTPTTVDAKIVAAAANAGHWAEL-----AGGG-QVTEQIFNDRIAELETLLEPGRAIQFNTLFLDPYLWK 498 (3089)
T ss_dssp HSSCSEEECCCHHHHTSHHHHHHHHHTTCEEEE-----CSTT-CCSHHHHHHHHHHHHHHSCTTCCCEEEEECSCHHHHH
T ss_pred cCCCCEEeCCCcCCcCCHHHHHHHHhCCCceee-----cCCC-CCCHHHHHHHHHHHHHhcCCCCceeechhhcChhhhh
Confidence 457799999999654 6666655566653 332 1111 123333333332 23346789999875555331
Q ss_pred -----HHHHHhhCCc---CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEE-EeecccccccHHH
Q psy7343 219 -----TEAAKLAEPH---CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSC-KIRIYQDVNKTVE 289 (487)
Q Consensus 219 -----~~aa~~~~~~---~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~v-KiR~~~d~~~~~e 289 (487)
.+.++.+.+. .|+|-+..|.| +.+...++++.+++. ++.++. +. ...+
T Consensus 499 ~~~g~~~~~~~~~~~g~~vdgv~~~aG~P---------------~~ee~~~~i~~l~~~-Gi~~i~~~~-------~t~~ 555 (3089)
T 3zen_D 499 LQVGGKRLVQRARQSGAPIDGLVVSAGIP---------------DLEEAVDIIDELNEV-GISHVVFKP-------GTVE 555 (3089)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEESSCC---------------CHHHHHHHHTSTTHH-HHCSEEECC-------CSHH
T ss_pred hccCHHHHHHHHHHcCCCceEEEEeCCCC---------------chhHhHHHHHHHHHc-CCEEEEEeC-------CCHH
Confidence 2334433333 34444444443 234455566655543 565555 53 3345
Q ss_pred HHHHHHHcCCc------EEEEEccccCCCCCCCCCCC-HHHH----HHHHhhCCCcEEEcCCCCCHHHHHHHHH------
Q psy7343 290 YARMLERAGCQ------LLAVHGRTVDQRGMNTGLAS-WEHI----TAVRKALTIPVIANGNIQCLADVEACLA------ 352 (487)
Q Consensus 290 ~a~~le~~G~d------~I~VhgRt~~~~g~~~g~~~-~~~i----~~i~~~~~iPVi~nGgI~s~~da~~~l~------ 352 (487)
.++.+++.|+| .|.+.|-+.. +..+..+ .+.+ .++++..++||++.|||.+++++..++.
T Consensus 556 ~a~~~~~i~~d~~~~~y~vv~~G~eaG---GH~g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~ 632 (3089)
T 3zen_D 556 QIRSVIRIAAEVPTKPVIVHIEGGRAG---GHHSWEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEV 632 (3089)
T ss_dssp HHHHHHHHHTTSTTSCEEEEECCSSSS---EECCSCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGT
T ss_pred HHHHHHHhhhhcCCCcEEEEEeCCCcC---CCCCcccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccc
Confidence 55666777777 7777654332 2333333 3555 7788888999999999999999999881
Q ss_pred ----hcCCcEEEeccccccCcc
Q psy7343 353 ----QTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 353 ----~~Gad~VmiGRa~l~~P~ 370 (487)
..|||||++|+.++.-+.
T Consensus 633 ~~~p~lGAdGV~vGTrfl~t~E 654 (3089)
T 3zen_D 633 HGYPLMPIDGILVGTAAMATLE 654 (3089)
T ss_dssp TTCCCCCCSEEECSSTTTTCTT
T ss_pred cCccCCCCCEEEecHHHHhCcc
Confidence 469999999999998764
No 158
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.05 E-value=5.2e-06 Score=80.13 Aligned_cols=86 Identities=19% Similarity=0.266 Sum_probs=72.7
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
.++.+.++.+++.|+|.+++-.=.... .....+.+.++++.+.+.+|+.+.|||+|.+++++++ +.|||.|.+|+.
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~---~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l-~~GadkVii~t~ 106 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAK---DPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALL-DCGVKRVVIGSM 106 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHH---CGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHH-HTTCSEEEECTT
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCccc---ccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHH-HcCCCEEEEccc
Confidence 478999999999999999884321111 1234578999999999999999999999999999999 799999999999
Q ss_pred cccCcccccC
Q psy7343 365 NLYNPALFTG 374 (487)
Q Consensus 365 ~l~~P~lf~~ 374 (487)
++.||.++.+
T Consensus 107 a~~~p~li~e 116 (243)
T 4gj1_A 107 AIKDATLCLE 116 (243)
T ss_dssp TTTCHHHHHH
T ss_pred cccCCchHHH
Confidence 9999998753
No 159
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.05 E-value=2.4e-05 Score=76.33 Aligned_cols=144 Identities=18% Similarity=0.243 Sum_probs=88.0
Q ss_pred CCeeeeecc-CCHHHHHHHHHhhCCc--CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEe
Q psy7343 204 RPLIIQFCG-NDSKNLTEAAKLAEPH--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKI 278 (487)
Q Consensus 204 ~Pv~Vqi~g-~d~~~~~~aa~~~~~~--~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKi 278 (487)
.++..+..+ .+.++....++.+.++ .+.|.++. .|. .. ..++...++++.+++.+ ++.++.-.
T Consensus 66 ~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i-~~d-----~~------~~~~e~~~~~~~a~~~~~~g~~vi~~~ 133 (264)
T 1xm3_A 66 YTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEV-IGC-----SR------SLLPDPVETLKASEQLLEEGFIVLPYT 133 (264)
T ss_dssp SEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECC-BCC-----TT------TCCBCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEee-cCC-----Cc------ccccchHHHHHHHHHHHCCCeEEEEEc
Confidence 445556654 5677665666666543 33344332 110 00 01223345555555443 44444221
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
..+ .+.++.+++.|+|+|+..+..... ..+...++.++++++..++||++.|||.+++|+.+++ +.|||+
T Consensus 134 -----~~~-~~~a~~~~~~gad~v~~~~~~~Gt---~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~-~~GAdg 203 (264)
T 1xm3_A 134 -----SDD-VVLARKLEELGVHAIMPGASPIGS---GQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAM-ELGADG 203 (264)
T ss_dssp -----CSC-HHHHHHHHHHTCSCBEECSSSTTC---CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HTTCSE
T ss_pred -----CCC-HHHHHHHHHhCCCEEEECCcccCC---CCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHH-HcCCCE
Confidence 112 345677888999999442221111 1123347889999998899999999999999999999 789999
Q ss_pred EEeccccccCc
Q psy7343 359 VMTAEGNLYNP 369 (487)
Q Consensus 359 VmiGRa~l~~P 369 (487)
|.+|++++..+
T Consensus 204 ViVGSAi~~a~ 214 (264)
T 1xm3_A 204 VLLNTAVSGAD 214 (264)
T ss_dssp EEESHHHHTSS
T ss_pred EEEcHHHhCCC
Confidence 99999987654
No 160
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.04 E-value=2.6e-05 Score=80.52 Aligned_cols=123 Identities=12% Similarity=0.158 Sum_probs=98.6
Q ss_pred CHHHHHHHHHhhC-CcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHH
Q psy7343 214 DSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 214 d~~~~~~aa~~~~-~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~ 290 (487)
+++++.+.++.+. +.|+.|.++.|. .+++...++++++++++ ++++.+...-+++.++..++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~ 239 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRM 239 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHH
Confidence 7888887776554 458888887664 24666778888888886 57888877667777888999
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++++|++.|-- + . ...+++..+++++.+++||++.+.+.+.++++++++...+|.|++
T Consensus 240 ~~~l~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 300 (398)
T 2pp0_A 240 GRKMEQFNLIWIEE--------P-L-DAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQP 300 (398)
T ss_dssp HHHHGGGTCSCEEC--------C-S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHcCCceeeC--------C-C-ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 99999999997631 1 2 235799999999999999999999999999999997777998876
No 161
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.03 E-value=2.9e-05 Score=81.11 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=104.0
Q ss_pred CCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHH
Q psy7343 213 NDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 213 ~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e 289 (487)
.+++++.+.++.+ ++.|..|.++.|+|.... .|. .....+.+...+++++||+++ ++++.+...-+++..+..+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~-~G~--~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~ 221 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR-GGH--MPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIR 221 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT-CCB--CCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc-cCC--CcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHH
Confidence 5788888776654 556999999999975321 111 111224666778888999887 5777776655677788899
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
+++.++++|++.|-- + . .+.+++.++++++.+++||++.+.+.+..+++++++...+|.|++-
T Consensus 222 ~~~~Le~~~i~~iEe--------P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d 284 (433)
T 3rcy_A 222 LGQAIEPYSPLWYEE--------P-V-PPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPA 284 (433)
T ss_dssp HHHHHGGGCCSEEEC--------C-S-CTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHhhhcCCCEEEC--------C-C-ChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999998842 1 1 2347899999999999999999999999999999977778988754
No 162
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.01 E-value=4e-05 Score=78.97 Aligned_cols=124 Identities=10% Similarity=0.055 Sum_probs=98.1
Q ss_pred CHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHH
Q psy7343 214 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 214 d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~ 290 (487)
+++++.+.++.+ ++.|+.|.|+.|++ +++...++++++++++ ++++.+...-+++.++..++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~ 229 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA---------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAY 229 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS---------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHH
Confidence 788887776654 44589999998761 3566677888888876 57787776556777888999
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhc----CCcEEEec
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQT----GVAGVMTA 362 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~----Gad~VmiG 362 (487)
++.++++|++.|- + + + ...+++..+++++.+++||++.+.+.+.++++++++.. .+|.|++-
T Consensus 230 ~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 230 AKMLRDYPLFWYE-------E-V-G-DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp HHHHTTSCCSEEE-------C-C-S-CTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCC
T ss_pred HHHHHHcCCCeec-------C-C-C-ChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEEC
Confidence 9999999999774 2 1 2 23579999999999999999999999999999999766 69988763
No 163
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.01 E-value=4.7e-05 Score=74.26 Aligned_cols=105 Identities=11% Similarity=0.095 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHhhh---ccCcEEEEeeccc-------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHH
Q psy7343 256 WPLLTNLVSSLRQA---VQVPVSCKIRIYQ-------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHIT 325 (487)
Q Consensus 256 ~~~i~eiv~~v~~~---~~iPV~vKiR~~~-------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~ 325 (487)
++...+.++++++. .++|++++..+.+ +.+.....++...+.|+|+|-+ +- . ...+.++
T Consensus 120 ~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt-~~--------~--~~~e~~~ 188 (263)
T 1w8s_A 120 EWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKI-KY--------T--GDPKTFS 188 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEE-EC--------C--SSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEE-cC--------C--CCHHHHH
Confidence 34444444444433 3899999865421 2233455568888999999988 31 1 2568899
Q ss_pred HHHhhCCC-cEEEcCCCC--CHHHHHHHHH---hcCCcEEEeccccccCccc
Q psy7343 326 AVRKALTI-PVIANGNIQ--CLADVEACLA---QTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 326 ~i~~~~~i-PVi~nGgI~--s~~da~~~l~---~~Gad~VmiGRa~l~~P~l 371 (487)
++++.+++ ||++.|||+ |.+++.++++ +.||+|+.+||+++..|+.
T Consensus 189 ~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~dp 240 (263)
T 1w8s_A 189 WAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRDA 240 (263)
T ss_dssp HHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTTH
T ss_pred HHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcCH
Confidence 99988887 999999999 9999888774 4899999999999888653
No 164
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.00 E-value=3.1e-05 Score=80.20 Aligned_cols=143 Identities=13% Similarity=0.072 Sum_probs=106.8
Q ss_pred CCCeeeeeccCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
..|+...+.+.+++++.+.++.+ ++.+..|.+ .|+|..-.. ....+++.-.+.++++|+++ ++++.+...
T Consensus 114 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~~------~~~~~~~~d~e~v~avR~avG~d~~L~vDaN 186 (405)
T 3rr1_A 114 KMRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGII------DTSRAVDAAVARVAEIRSAFGNTVEFGLDFH 186 (405)
T ss_dssp CEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSCB------CSHHHHHHHHHHHHHHHHTTGGGSEEEEECC
T ss_pred ceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCccccc------ccchhHHHHHHHHHHHHHHhCCCceEEEECC
Confidence 45666666667888888776654 455888888 777531000 01124556677888899887 577887765
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+++..+..++++.+++.|++.|-= + . .+.+++..+++++.+++||++.+.+.+..++.++++...+|.|
T Consensus 187 ~~~~~~~A~~~~~~L~~~~i~~iEe--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v 256 (405)
T 3rr1_A 187 GRVSAPMAKVLIKELEPYRPLFIEE--------P-V-LAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSIL 256 (405)
T ss_dssp SCBCHHHHHHHHHHHGGGCCSCEEC--------S-S-CCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEC--------C-C-CcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeE
Confidence 6778888899999999999998842 1 1 2347899999999999999999999999999999977789988
Q ss_pred Eec
Q psy7343 360 MTA 362 (487)
Q Consensus 360 miG 362 (487)
++-
T Consensus 257 ~~d 259 (405)
T 3rr1_A 257 QPD 259 (405)
T ss_dssp CCB
T ss_pred EEC
Confidence 754
No 165
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.00 E-value=3.2e-05 Score=79.41 Aligned_cols=124 Identities=12% Similarity=0.172 Sum_probs=97.6
Q ss_pred CCH---HHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeeccccccc
Q psy7343 213 NDS---KNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNK 286 (487)
Q Consensus 213 ~d~---~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~ 286 (487)
.++ +.+.+.++.+ ++.|+.|.++.|+ .+++...++++++++++ ++++.+...-+++.++
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~ 199 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGG---------------TSFKEDVRHINALQHTAGSSITMILDANQSYDAAA 199 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHH
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHH
Confidence 467 8887776655 4458999998775 14566778888888877 5778877655677778
Q ss_pred HHHHHHHHHHc-CCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 287 TVEYARMLERA-GCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 287 ~~e~a~~le~~-G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
..++++.++++ |++.|- | + . ...+++..+++++.+++||++.+.+.+.++++++++...+|.|++
T Consensus 200 a~~~~~~l~~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 265 (382)
T 2gdq_A 200 AFKWERYFSEWTNIGWLE-------E-P-L-PFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQP 265 (382)
T ss_dssp HHTTHHHHTTCSCEEEEE-------C-C-S-CSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHhhccCCeEEE-------C-C-C-CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 88899999998 888763 2 1 2 235789999999999999999999999999999997777898875
No 166
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.99 E-value=7.2e-05 Score=73.28 Aligned_cols=128 Identities=16% Similarity=0.182 Sum_probs=84.6
Q ss_pred HHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc---ccccHHHHHHHH
Q psy7343 218 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ---DVNKTVEYARML 294 (487)
Q Consensus 218 ~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~---d~~~~~e~a~~l 294 (487)
..++...++...|.||+.+.. |.....+++.+.+-++++++.++-+ .+|+-+.. +.++....++..
T Consensus 129 v~Ea~~Ai~~GAdEIDmVINi----------g~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia 197 (288)
T 3oa3_A 129 VSEAKRAMQNGASELDMVMNY----------PWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLS 197 (288)
T ss_dssp HHHHHHHHHTTCSEEEEECCH----------HHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeeh----------hhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHH
Confidence 345555666668999943221 2222347898888888898887655 35554421 234566678888
Q ss_pred HHcCCcEEEEEccccCCCCCCCCCCCHH---HHHHHHh--hCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 295 ERAGCQLLAVHGRTVDQRGMNTGLASWE---HITAVRK--ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 295 e~~G~d~I~VhgRt~~~~g~~~g~~~~~---~i~~i~~--~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
.++|+|+|--+ |. ...+.+..+ .++++.+ ..+++|.++|||+|.+|+.+++ +.||+.+....
T Consensus 198 ~eaGADfVKTS--TG----f~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi-~aGA~RiGtS~ 264 (288)
T 3oa3_A 198 SLAGADYVKTS--TG----FNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMV-RAGAERLGASA 264 (288)
T ss_dssp HHTTCSEEECC--CS----SSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHH-HTTCSEEEESC
T ss_pred HHcCCCEEEcC--CC----CCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-HcCCceeehhh
Confidence 89999999662 21 112344444 4444443 2479999999999999999999 69999655443
No 167
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=97.99 E-value=2.1e-05 Score=74.38 Aligned_cols=81 Identities=16% Similarity=0.177 Sum_probs=59.7
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCC-CCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQR-GMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~-g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
+..+ ++.+.+.|+|+|.+..-...+. .+. .+..|+.++++++..++||++.||| |.+++.+++ +.|+|+|.+|++
T Consensus 119 t~~~-~~~a~~~gaD~i~~~~~f~~~~~~g~-~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~-~~Ga~gv~vgs~ 194 (221)
T 1yad_A 119 SLEE-AVQAEKEDADYVLFGHVFETDCKKGL-EGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVK-QAGADGIAVMSG 194 (221)
T ss_dssp SHHH-HHHHHHTTCSEEEEECCC-----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHH-HTTCSEEEESHH
T ss_pred CHHH-HHHHHhCCCCEEEECCccccCCCCCC-CCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHH-HcCCCEEEEhHH
Confidence 3344 5666789999999943211111 111 1346899999998889999999999 999999999 589999999999
Q ss_pred cccCcc
Q psy7343 365 NLYNPA 370 (487)
Q Consensus 365 ~l~~P~ 370 (487)
++.+++
T Consensus 195 i~~~~d 200 (221)
T 1yad_A 195 IFSSAE 200 (221)
T ss_dssp HHTSSS
T ss_pred hhCCCC
Confidence 987654
No 168
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.98 E-value=2.8e-05 Score=82.82 Aligned_cols=102 Identities=20% Similarity=0.178 Sum_probs=72.0
Q ss_pred HHHHHHHHhhhc-c-CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCC----CC-CCCCCCCHHHHHHHHhhC
Q psy7343 259 LTNLVSSLRQAV-Q-VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQ----RG-MNTGLASWEHITAVRKAL 331 (487)
Q Consensus 259 i~eiv~~v~~~~-~-iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~----~g-~~~g~~~~~~i~~i~~~~ 331 (487)
+.+.++.+++.. + +||+++ ++. ..+.++.+.++|+|+|.| |..... +. ...|.+....+.++.+.+
T Consensus 270 ~~~~i~~lk~~~~~~~~Vi~G-----~V~-t~~~a~~l~~aGad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~ 342 (503)
T 1me8_A 270 QKITIGWIREKYGDKVKVGAG-----NIV-DGEGFRYLADAGADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVAER 342 (503)
T ss_dssp HHHHHHHHHHHHGGGSCEEEE-----EEC-SHHHHHHHHHHTCSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCceEeec-----ccc-CHHHHHHHHHhCCCeEEe-cccCCcCcccccccCCCCchHHHHHHHHHHH
Confidence 444556677665 4 888875 332 345567788999999999 653210 00 011345566666665443
Q ss_pred ---------CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 332 ---------TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 332 ---------~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
++|||+.|||.++.|+.+++ ..|||+||+|+.++.-
T Consensus 343 ~~~~~~~~~~ipvia~GGi~~~~di~kAl-alGA~~V~iG~~~~~~ 387 (503)
T 1me8_A 343 NKYFEETGIYIPVCSDGGIVYDYHMTLAL-AMGADFIMLGRYFARF 387 (503)
T ss_dssp HHHHHHHSEECCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHTB
T ss_pred HHHhhhcCCCceEEEeCCCCCHHHHHHHH-HcCCCEEEECchhhcc
Confidence 69999999999999999999 7899999999998754
No 169
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=97.98 E-value=2.5e-05 Score=80.86 Aligned_cols=135 Identities=17% Similarity=0.227 Sum_probs=100.3
Q ss_pred CHHHHHHHHHhhC-CcCcEEEeec------CCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeeccccc
Q psy7343 214 DSKNLTEAAKLAE-PHCDGIDINI------GCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDV 284 (487)
Q Consensus 214 d~~~~~~aa~~~~-~~~d~IdiN~------GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~ 284 (487)
+++++.+.++.+. +.|+.|.++. |.. . ....+|....++.+...++++++++++ ++++.+...-+++.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~-~--~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNW-N--QQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCB-S--CSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcc-c--cCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 7888887776554 4599999986 431 1 011111111234566778899999877 57788776556777
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++..++++.++++|++.|-- + . ...+++..+++++.+++||++.+.+.+.++++++++...+|.|++
T Consensus 229 ~~a~~~~~~l~~~~i~~iE~--------P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 229 TSAIQFGRMIEELGIFYYEE--------P-V-MPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp HHHHHHHHHHGGGCCSCEEC--------S-S-CSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHHHhcCCCEEeC--------C-C-ChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 88899999999999997742 1 1 235799999999999999999999999999999997777898865
No 170
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=97.97 E-value=4.3e-06 Score=85.95 Aligned_cols=196 Identities=14% Similarity=0.125 Sum_probs=106.3
Q ss_pred CCceEEecCCC--C----CCHHHHHHHHHcCCCeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCcc
Q psy7343 78 SPRFILAPMVD--A----SELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRF 151 (487)
Q Consensus 78 ~~~~~LAPMag--~----td~pFR~l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~ 151 (487)
+.|+++|||++ + +|.+|++.|+++|+..++++ +++..+-. . ... .+.|..+|+.... .+..+.
T Consensus 72 ~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss-~s~~~le~----i----~~~-~~~~~~fQly~~~-~~~~~~ 140 (380)
T 1p4c_A 72 SMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLST-ASNMSIED----L----ARQ-CDGDLWFQLYVIH-REIAQG 140 (380)
T ss_dssp SSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECT-TCSSCHHH----H----HHH-CCSCEEEEECCSS-HHHHHH
T ss_pred CCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCc-cccCCHHH----H----Hhc-cCCCeEEEEEech-HHHHHH
Confidence 66899999976 6 99999999999999999997 44444421 1 111 3578888974221 011111
Q ss_pred cccc--ccCC------CchH---HHHHHHHhCCcc--c--ee-------ccc---cchhh---hc---ChhHHHHHHh--
Q psy7343 152 ILAP--MVDA------SELP---WRLLSRRYGSHL--C--YT-------PMV---SAHQF---IA---DKKLRQEILM-- 198 (487)
Q Consensus 152 ~lAp--ma~~------td~~---fr~i~~~~Ga~l--~--~t-------~~v---~~~~L---l~---~~~~~~~~l~-- 198 (487)
++.- .+|+ .|.+ .|..+.+.|..+ . .. .++ .++++ +. ++....+.++
T Consensus 141 ~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i 220 (380)
T 1p4c_A 141 MVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWL 220 (380)
T ss_dssp HHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHH
Confidence 1100 1111 1221 122334444211 0 00 011 11211 11 4433333333
Q ss_pred cCCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEe--ecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEE
Q psy7343 199 STPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDI--NIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVS 275 (487)
Q Consensus 199 ~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~Idi--N~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~ 275 (487)
....+.||++|.. ..++ .++.+.++ +|+|.+ +.|- + .. + ...+++.+.++. +.+++||+
T Consensus 221 ~~~~~~Pv~vkgv-~t~e----~a~~a~~aGad~I~vs~~gg~-~---~d---~--~~~~~~~l~~v~----~~~~~pVi 282 (380)
T 1p4c_A 221 RDLWPHKLLVKGL-LSAE----DADRCIAEGADGVILSNHGGR-Q---LD---C--AISPMEVLAQSV----AKTGKPVL 282 (380)
T ss_dssp HHHCCSEEEEEEE-CCHH----HHHHHHHTTCSEEEECCGGGT-S---CT---T--CCCGGGTHHHHH----HHHCSCEE
T ss_pred HHhcCCCEEEEec-CcHH----HHHHHHHcCCCEEEEcCCCCC-c---CC---C--CcCHHHHHHHHH----HHcCCeEE
Confidence 1223689999843 2333 34444444 788877 2221 1 00 1 123566666644 44577999
Q ss_pred EEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 276 CKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 276 vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
+.+ ++.+..++.+.+. .|+|+|++ ||.
T Consensus 283 a~G----GI~~~~dv~kal~-~GAdaV~i-Gr~ 309 (380)
T 1p4c_A 283 IDS----GFRRGSDIVKALA-LGAEAVLL-GRA 309 (380)
T ss_dssp ECS----SCCSHHHHHHHHH-TTCSCEEE-SHH
T ss_pred EEC----CCCCHHHHHHHHH-hCCcHhhe-hHH
Confidence 997 7888899998886 89999999 773
No 171
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.96 E-value=7.5e-05 Score=72.19 Aligned_cols=127 Identities=23% Similarity=0.328 Sum_probs=88.3
Q ss_pred HHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc---ccccHHHHHHHHH
Q psy7343 219 TEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ---DVNKTVEYARMLE 295 (487)
Q Consensus 219 ~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~---d~~~~~e~a~~le 295 (487)
.++...++..+|.||+.+.. |.....+|+.+.+-+.++++.++ ...+|+-+.. +.++....++...
T Consensus 115 ~Ea~~Ai~~GAdEIDmViNi----------g~lk~g~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~ 183 (260)
T 3r12_A 115 HEAIFAVESGADEIDMVINV----------GMLKAKEWEYVYEDIRSVVESVK-GKVVKVIIETCYLDTEEKIAACVISK 183 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCH----------HHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeeh----------hhhccccHHHHHHHHHHHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 44555566668888864221 33333478988888888888774 2334554421 3345677788888
Q ss_pred HcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 296 RAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 296 ~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
++|+|+|--+ | |...+.+..+.++.+++.+ +++|-++|||+|.+|+.+++ +.||+.+....
T Consensus 184 eaGADfVKTS--T----Gf~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi-~aGA~RiGtS~ 246 (260)
T 3r12_A 184 LAGAHFVKTS--T----GFGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMI-MYGADRIGTSS 246 (260)
T ss_dssp HTTCSEEECC--C----SSSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HTTCSEEEESC
T ss_pred HhCcCEEEcC--C----CCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-HcCCceeecch
Confidence 9999999762 1 2233557777787777765 69999999999999999999 79999655443
No 172
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.96 E-value=7.1e-05 Score=71.30 Aligned_cols=128 Identities=22% Similarity=0.311 Sum_probs=89.2
Q ss_pred HHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc---c----ccccHHHH
Q psy7343 218 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY---Q----DVNKTVEY 290 (487)
Q Consensus 218 ~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~---~----d~~~~~e~ 290 (487)
..++...++...|.||+.+.. |.....+|+.+.+-+.++++.++ ...+|+-+. . +.++....
T Consensus 83 ~~E~~~Ai~~GAdEIDmVini----------g~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a 151 (231)
T 3ndo_A 83 ATEAELAVAAGATEIDMVIDV----------GAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADV 151 (231)
T ss_dssp HHHHHHHHHTTCSEEEEECCH----------HHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeeh----------HhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHH
Confidence 345555666668888865322 33333578988888888888874 234465442 1 34456677
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCC-CCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMN-TGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~-~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
++...++|+|+|--+ - |.. .+.+..+.++.+++.+ +++|-++|||+|.+|+.+++ +.||+.+....
T Consensus 152 ~~ia~~aGADfVKTS-T-----Gf~~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i-~aGa~RiGtS~ 220 (231)
T 3ndo_A 152 CRVARDAGADFVKTS-T-----GFHPSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAML-DAGATRLGLSG 220 (231)
T ss_dssp HHHHHHTTCSEEECC-C-----SCCTTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHH-HTTCSEEEESS
T ss_pred HHHHHHHCcCEEEcC-C-----CCCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-Hhcchhcccch
Confidence 788889999999652 1 112 3557788888887775 69999999999999999999 79999554443
No 173
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.95 E-value=4.1e-05 Score=72.32 Aligned_cols=81 Identities=20% Similarity=0.317 Sum_probs=60.4
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccC--CCCCCCCCCCHHHHHHHHhhCC-CcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVD--QRGMNTGLASWEHITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~--~~g~~~g~~~~~~i~~i~~~~~-iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
.+..+ +..+.+.|+|+|.+ +.... ...++.....|+.++++++.++ +||++.|||+ ++++.+++ +.|+|+|.+
T Consensus 124 ~t~~e-~~~a~~~g~d~v~~-~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~-~~Ga~gv~v 199 (227)
T 2tps_A 124 HTMSE-VKQAEEDGADYVGL-GPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVI-QAGADGVSM 199 (227)
T ss_dssp CSHHH-HHHHHHHTCSEEEE-CCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHH-HTTCSEEEE
T ss_pred CCHHH-HHHHHhCCCCEEEE-CCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHH-HcCCCEEEE
Confidence 34555 45567889999997 32111 1111123346899999998887 9999999999 99999988 689999999
Q ss_pred ccccccCc
Q psy7343 362 AEGNLYNP 369 (487)
Q Consensus 362 GRa~l~~P 369 (487)
|++++..+
T Consensus 200 gs~i~~~~ 207 (227)
T 2tps_A 200 ISAISQAE 207 (227)
T ss_dssp SHHHHTSS
T ss_pred hHHhhcCC
Confidence 99998753
No 174
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=97.94 E-value=3.5e-05 Score=78.95 Aligned_cols=126 Identities=11% Similarity=0.100 Sum_probs=100.3
Q ss_pred CHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccc-cccHHH
Q psy7343 214 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQD-VNKTVE 289 (487)
Q Consensus 214 d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d-~~~~~e 289 (487)
+++++.+.++.+ ++.++.|.|+.|++ | .+++...+.++++|+++ ++++.+...-+++ ..+..+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~---------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~ 212 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVM---------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAM 212 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTT---------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCC---------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHH
Confidence 347777766654 55699999999874 1 24677778888899886 5788887666777 778889
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
+++.+++.|++.|-= + . .+.+++..+++++.+++||++.+.+.+.+++.++++...+|.|++-
T Consensus 213 ~~~~l~~~~i~~iEq--------P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 275 (374)
T 3sjn_A 213 MAKRLEEFNLNWIEE--------P-V-LADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPD 275 (374)
T ss_dssp HHHHSGGGCCSEEEC--------S-S-CTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCB
T ss_pred HHHHhhhcCceEEEC--------C-C-CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999998841 1 1 2347899999999999999999999999999999987889988753
No 175
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=97.93 E-value=3.5e-05 Score=80.43 Aligned_cols=123 Identities=14% Similarity=0.114 Sum_probs=96.3
Q ss_pred CCH-HHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 213 NDS-KNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 213 ~d~-~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
.++ +.+.+.++.+.+ .|+.|.++.|+ +++...++++++++++ ++++.+...-+++.++..
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai 246 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAYTMADAR 246 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 467 778777665544 48999988765 3566677888888876 577777665567778889
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC-CcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~-iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++++.++++|++.|- + + . ...+++..+++++.++ +||++.+.+.+.++++++++...+|.|++
T Consensus 247 ~~~~~L~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 310 (428)
T 3bjs_A 247 RVLPVLAEIQAGWLE-------E-P-F-ACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQP 310 (428)
T ss_dssp HHHHHHHHTTCSCEE-------C-C-S-CTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHhcCCCEEE-------C-C-C-CccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 999999999999764 1 1 1 2357899999999998 99999999999999999996666888765
No 176
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=97.93 E-value=0.00014 Score=73.49 Aligned_cols=132 Identities=18% Similarity=0.113 Sum_probs=97.9
Q ss_pred CCeeeeeccCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecc
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIY 281 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~ 281 (487)
.|+...+.+.+++++.+.++.+ ++.|+.|.|+.|+ +++.-.++++++++.- ++++.+...-+
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~g~~~~l~vDan~~ 192 (345)
T 2zad_A 129 IETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------NLKEDIEAVEEIAKVTRGAKYIVDANMG 192 (345)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHSTTCEEEEECTTC
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------CHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 3444445456888887776654 4458999888765 2444456677787762 35565554445
Q ss_pred cccccHHHHHHHHHHcCCc--EEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 282 QDVNKTVEYARMLERAGCQ--LLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d--~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
++.++..++++.++++|++ .|- | + . ...+++..+++++.+++||++.+.+.+.+++.++++...+|.|
T Consensus 193 ~~~~~a~~~~~~l~~~~i~~~~iE-------~-P-~-~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v 262 (345)
T 2zad_A 193 YTQKEAVEFARAVYQKGIDIAVYE-------Q-P-V-RREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYV 262 (345)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEE-------C-C-S-CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEE
T ss_pred CCHHHHHHHHHHHHhcCCCeeeee-------C-C-C-CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEE
Confidence 6777888999999999999 663 2 1 2 2357899999999999999999999999999999977779999
Q ss_pred Ee
Q psy7343 360 MT 361 (487)
Q Consensus 360 mi 361 (487)
++
T Consensus 263 ~i 264 (345)
T 2zad_A 263 NI 264 (345)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 177
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=97.92 E-value=0.00012 Score=73.48 Aligned_cols=179 Identities=12% Similarity=0.090 Sum_probs=104.4
Q ss_pred CCceEEecCCCCCCHHHHHHHHHcCC-CeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCccccccc
Q psy7343 78 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPM 156 (487)
Q Consensus 78 ~~~~~LAPMag~td~pFR~l~~~~Ga-dl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lApm 156 (487)
+.++++|||+|+|+..++..+.+.|+ +++.+.+++.+.+... .+.+.. ..+.|+.+++... ++.
T Consensus 26 ~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~----i~~i~~-~~~~p~gVnl~~~----~~~------ 90 (326)
T 3bo9_A 26 EHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKA----ISELRQ-KTDKPFGVNIILV----SPW------ 90 (326)
T ss_dssp SSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHH----HHHHHT-TCSSCEEEEEETT----STT------
T ss_pred CCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHH----HHHHHH-hcCCCEEEEEecc----CCC------
Confidence 66899999999999999999999987 7888887766554221 111111 1257888886321 110
Q ss_pred cCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEee
Q psy7343 157 VDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDIN 235 (487)
Q Consensus 157 a~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN 235 (487)
....-.+..+.|++....... ++....+.++. .+.++++++. +.+.. +.+++. .|+|-++
T Consensus 91 ----~~~~~~~~~~~g~d~V~l~~g-------~p~~~~~~l~~--~g~~v~~~v~--s~~~a----~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 91 ----ADDLVKVCIEEKVPVVTFGAG-------NPTKYIRELKE--NGTKVIPVVA--SDSLA----RMVERAGADAVIAE 151 (326)
T ss_dssp ----HHHHHHHHHHTTCSEEEEESS-------CCHHHHHHHHH--TTCEEEEEES--SHHHH----HHHHHTTCSCEEEE
T ss_pred ----HHHHHHHHHHCCCCEEEECCC-------CcHHHHHHHHH--cCCcEEEEcC--CHHHH----HHHHHcCCCEEEEE
Confidence 011234556678766443221 22222233322 2567777663 33332 223333 6666664
Q ss_pred cCCCcceeeccC-ccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 236 IGCPQMVAKRGH-YGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 236 ~GcP~~i~~~gr-~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
... .|+ .| . ..+++.+.+ +++.+++||++.+ .+.+..++.+.+. .|+++|.+ |+.
T Consensus 152 g~~------~GG~~G-~-~~~~~ll~~----i~~~~~iPviaaG----GI~~~~dv~~al~-~GA~gV~v-Gs~ 207 (326)
T 3bo9_A 152 GME------SGGHIG-E-VTTFVLVNK----VSRSVNIPVIAAG----GIADGRGMAAAFA-LGAEAVQM-GTR 207 (326)
T ss_dssp CTT------SSEECC-S-SCHHHHHHH----HHHHCSSCEEEES----SCCSHHHHHHHHH-HTCSEEEE-SHH
T ss_pred CCC------CCccCC-C-ccHHHHHHH----HHHHcCCCEEEEC----CCCCHHHHHHHHH-hCCCEEEe-chH
Confidence 211 111 12 1 234555554 4555689999997 6667778777775 79999999 664
No 178
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.91 E-value=6.8e-05 Score=70.08 Aligned_cols=81 Identities=20% Similarity=0.270 Sum_probs=61.5
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccC-CCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVD-QRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~-~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
+..++ ..+.+.|+|+|.+++.... ..++ ....+|+.++++++..++||++.|||+ .+++.+++ +.|+|+|++|++
T Consensus 117 t~~e~-~~~~~~g~d~i~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~-~~Ga~gv~vgs~ 192 (215)
T 1xi3_A 117 SLEEA-LEAEKKGADYLGAGSVFPTKTKED-ARVIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVL-KTGVDGIAVISA 192 (215)
T ss_dssp SHHHH-HHHHHHTCSEEEEECSSCC----C-CCCCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHH-TTTCSEEEESHH
T ss_pred CHHHH-HHHHhcCCCEEEEcCCccCCCCCC-CCCcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHH-HcCCCEEEEhHH
Confidence 44553 4567789999998653211 1111 224578999999988899999999999 99999988 689999999999
Q ss_pred cccCcc
Q psy7343 365 NLYNPA 370 (487)
Q Consensus 365 ~l~~P~ 370 (487)
++..|+
T Consensus 193 i~~~~d 198 (215)
T 1xi3_A 193 VMGAED 198 (215)
T ss_dssp HHTSSS
T ss_pred HhCCCC
Confidence 988763
No 179
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=97.91 E-value=5.1e-05 Score=78.62 Aligned_cols=133 Identities=21% Similarity=0.290 Sum_probs=100.4
Q ss_pred CHHHHHHHHHhh-CCcCcEEEeec----CCCcceeeccCcccccc--CChHHHHHHHHHHhhhc--cCcEEEEeeccccc
Q psy7343 214 DSKNLTEAAKLA-EPHCDGIDINI----GCPQMVAKRGHYGAYLQ--DDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDV 284 (487)
Q Consensus 214 d~~~~~~aa~~~-~~~~d~IdiN~----GcP~~i~~~gr~G~~l~--~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~ 284 (487)
+++++.+.++.+ ++.|+.|.++. |.... . +++.+. ++.+...++++++++++ ++++.+...-+++.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~----~-~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~ 223 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHR----D-FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDI 223 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCS----C-SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccC----C-cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 677777766654 44599999997 54211 1 233332 35677788899999887 46777766556677
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++..++++.++++|++.|-- + . ...+++..+++++.+++||++.+.+.+.++++++++...+|.|++
T Consensus 224 ~~a~~~~~~l~~~~i~~iEe--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 290 (410)
T 2qq6_A 224 PSSIRFARAMEPFGLLWLEE--------P-T-PPENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMP 290 (410)
T ss_dssp HHHHHHHHHHGGGCCSEEEC--------C-S-CTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHHhhcCCCeEEC--------C-C-ChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 78889999999999998742 1 1 235789999999999999999999999999999997777898875
No 180
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=97.91 E-value=8.7e-05 Score=75.39 Aligned_cols=136 Identities=13% Similarity=0.073 Sum_probs=101.0
Q ss_pred CeeeeeccCCHHHHHHHHH-hhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecc
Q psy7343 205 PLIIQFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIY 281 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~ 281 (487)
|+...+...+++.+.+.++ .+++.+..+.++.|+. ++.-.+.++++++++ ++++.+...-+
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~~ 193 (354)
T 3jva_A 130 ITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQA 193 (354)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCCC
Confidence 3334445567888776655 4455588888877652 234456677788776 57777776667
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++..++++.+++.|++.|- | + . .+.+++..+++++.+++||++.+.+.+.+++.++++...+|.|++
T Consensus 194 ~~~~~a~~~~~~L~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 263 (354)
T 3jva_A 194 WTPKDAVKAIQALADYQIELVE-------Q-P-V-KRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINI 263 (354)
T ss_dssp SCHHHHHHHHHHTTTSCEEEEE-------C-C-S-CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEE-------C-C-C-ChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 7888888999999998888774 2 1 2 234789999999999999999999999999999997778999987
Q ss_pred ccccc
Q psy7343 362 AEGNL 366 (487)
Q Consensus 362 GRa~l 366 (487)
--..+
T Consensus 264 k~~~~ 268 (354)
T 3jva_A 264 KLMKC 268 (354)
T ss_dssp CHHHH
T ss_pred Cchhc
Confidence 64433
No 181
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=97.90 E-value=0.00012 Score=74.61 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=66.1
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeeccCC----------HHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccc
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFCGND----------SKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGA 250 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~d----------~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~ 250 (487)
+.+......++++ ....+ ||+|+|...+ .+++.++++.+++. .|.|++..|. .+.
T Consensus 207 lenR~rf~~evv~aVr~~vg~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~---------~~~ 276 (361)
T 3gka_A 207 IENRARLLLEVVDAAIDVWSAA-RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF---------GGD 276 (361)
T ss_dssp HHHHSHHHHHHHHHHHHHHCGG-GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC---------STT
T ss_pred hhhcHHHHHHHHHHHHHHcCCC-eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC---------CCH
Confidence 3334444555553 23334 9999988532 35678889988877 7888887553 111
Q ss_pred cccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 251 YLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 251 ~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
++++.+++.+++||++++ ++ +..++.+.+++.++|.|++ ||.
T Consensus 277 ----------~~~~~ik~~~~iPvi~~G----gi-t~e~a~~~l~~G~aD~V~i-GR~ 318 (361)
T 3gka_A 277 ----------AIGQQLKAAFGGPFIVNE----NF-TLDSAQAALDAGQADAVAW-GKL 318 (361)
T ss_dssp ----------CCHHHHHHHHCSCEEEES----SC-CHHHHHHHHHTTSCSEEEE-SHH
T ss_pred ----------HHHHHHHHHcCCCEEEeC----CC-CHHHHHHHHHcCCccEEEE-CHH
Confidence 234567777899999997 45 6677777777767999999 885
No 182
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=97.89 E-value=3.7e-05 Score=79.92 Aligned_cols=151 Identities=13% Similarity=0.095 Sum_probs=107.9
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccC----------ccc-------cccCChHHHHHHH
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGH----------YGA-------YLQDDWPLLTNLV 263 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr----------~G~-------~l~~d~~~i~eiv 263 (487)
...|+...+.+.+++++.+.++.. ++.|..+.+..|+|...+..+. .+. ...++.+...+++
T Consensus 131 ~~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v 210 (418)
T 3r4e_A 131 DGIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLF 210 (418)
T ss_dssp SSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHH
T ss_pred CeeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 345555555567888888776654 5569999999998642221110 000 0011245667788
Q ss_pred HHHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCC
Q psy7343 264 SSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNI 341 (487)
Q Consensus 264 ~~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI 341 (487)
+++|+++ ++++.+...-+++..+..++++.+++.|++.|.= + . .+.+++..+++++.+++||++.+.+
T Consensus 211 ~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~ 280 (418)
T 3r4e_A 211 EELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLED--------C-T-PAENQEAFRLVRQHTVTPLAVGEIF 280 (418)
T ss_dssp HHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEES--------C-S-CCSSGGGGHHHHHHCCSCEEECTTC
T ss_pred HHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC--------C-C-CccCHHHHHHHHhcCCCCEEEcCCc
Confidence 8899887 5788887766778888999999999999998841 1 1 2346788899999999999999999
Q ss_pred CCHHHHHHHHHhcCCcEEEec
Q psy7343 342 QCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 342 ~s~~da~~~l~~~Gad~VmiG 362 (487)
.+.+++.++++...+|.|++-
T Consensus 281 ~~~~~~~~~l~~~a~d~v~~k 301 (418)
T 3r4e_A 281 NTIWDAKDLIQNQLIDYIRAT 301 (418)
T ss_dssp CSGGGTHHHHHTTCCSEECCC
T ss_pred CCHHHHHHHHHcCCCCeEecC
Confidence 999999999976778988754
No 183
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=97.87 E-value=2.9e-05 Score=79.13 Aligned_cols=111 Identities=9% Similarity=-0.011 Sum_probs=72.6
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeeccCC----------HHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccc
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFCGND----------SKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGA 250 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~d----------~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~ 250 (487)
+.+......++++ ....+ ||+|+|...+ .+++.++++.+++. .|.|+++.|. .|.
T Consensus 199 lenR~rf~~eiv~aVr~~vg~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~---------~~~ 268 (362)
T 4ab4_A 199 LENRARLLLEVTDAAIEVWGAQ-RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE---------ADD 268 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC---------CTT
T ss_pred hhhHHHHHHHHHHHHHHhcCCC-ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC---------CCH
Confidence 3334444455553 23334 9999998542 35678889988877 7888887553 111
Q ss_pred cccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh
Q psy7343 251 YLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA 330 (487)
Q Consensus 251 ~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~ 330 (487)
++++.+++.+++||++++ ++ +..++.+.+++.++|.|++ ||.... +-+++.++++.
T Consensus 269 ----------~~~~~ik~~~~iPvi~~G----gi-t~e~a~~~l~~g~aD~V~i-GR~~la--------nPdl~~k~~~g 324 (362)
T 4ab4_A 269 ----------SIGPLIKEAFGGPYIVNE----RF-DKASANAALASGKADAVAF-GVPFIA--------NPDLPARLAAD 324 (362)
T ss_dssp ----------CCHHHHHHHHCSCEEEES----SC-CHHHHHHHHHTTSCSEEEE-SHHHHH--------CTTHHHHHHTT
T ss_pred ----------HHHHHHHHHCCCCEEEeC----CC-CHHHHHHHHHcCCccEEEE-CHHhHh--------CcHHHHHHHcC
Confidence 234567777899999997 45 6677777777777999999 885322 22346666654
No 184
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=97.86 E-value=0.00016 Score=74.24 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=104.5
Q ss_pred CCeeeeeccCCHHHHHHHHH-hhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 204 RPLIIQFCGNDSKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~-~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
.|+...+...+++++.+.++ .+++ .+..+.+..|+ .+++.-.+.++++++.+ ++++.+...
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avR~a~g~~~~l~vDan 202 (383)
T 3i4k_A 138 VDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGA---------------GDPAEDTRRVAELAREVGDRVSLRIDIN 202 (383)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCS---------------SCHHHHHHHHHHHHHTTTTTSEEEEECT
T ss_pred EEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECC
Confidence 44544455567777765544 5565 67888777665 14566667888899887 478888877
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+|+..+..++++.+++.|++.|- | + . ...+++..+++++.+++||++.+.+.+.+++.++++...+|.|
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v 272 (383)
T 3i4k_A 203 ARWDRRTALHYLPILAEAGVELFE-------Q-P-T-PADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVI 272 (383)
T ss_dssp TCSCHHHHHHHHHHHHHTTCCEEE-------S-C-S-CTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------C-C-C-ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEE
Confidence 778888899999999999999884 2 1 2 2347899999999999999999999999999999977789999
Q ss_pred Eeccc
Q psy7343 360 MTAEG 364 (487)
Q Consensus 360 miGRa 364 (487)
++--.
T Consensus 273 ~~k~~ 277 (383)
T 3i4k_A 273 ALKTT 277 (383)
T ss_dssp EECTT
T ss_pred EEccc
Confidence 87543
No 185
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=97.86 E-value=6.1e-05 Score=77.95 Aligned_cols=136 Identities=15% Similarity=0.076 Sum_probs=102.6
Q ss_pred CCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccc-cCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 213 NDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYL-QDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 213 ~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l-~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
.+++++.+.++. +++.+..+.++.|++.. +..|... ..+++...+.++++|+++ ++++.+...-+++..+..
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~ 225 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYT----IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAK 225 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCB----TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCc----ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHH
Confidence 477888776654 44459999999888532 1112111 123566677888899887 578888766677888889
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
++++.+++.|++.|-- + . .+.+++..+++++.+++||++.+.+.+.+++.++++...+|.|++-
T Consensus 226 ~~~~~l~~~~i~~iEe--------P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d 289 (404)
T 4e5t_A 226 RLARRLEAYDPLWFEE--------P-I-PPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMN 289 (404)
T ss_dssp HHHHHHGGGCCSEEEC--------C-S-CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCC
T ss_pred HHHHHHhhcCCcEEEC--------C-C-CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecC
Confidence 9999999999998852 1 1 2347899999999999999999999999999999977778988654
No 186
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.86 E-value=2.7e-05 Score=75.25 Aligned_cols=150 Identities=13% Similarity=0.121 Sum_probs=92.7
Q ss_pred CCHHHHHHHHHhhCCc-CcEEEeecCC--Ccc---eeeccCccccc--cCChHHHHHHHHHHhhhccCcEEEEeecccc-
Q psy7343 213 NDSKNLTEAAKLAEPH-CDGIDINIGC--PQM---VAKRGHYGAYL--QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQD- 283 (487)
Q Consensus 213 ~d~~~~~~aa~~~~~~-~d~IdiN~Gc--P~~---i~~~gr~G~~l--~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d- 283 (487)
.+.+...++++.+++. +|.|||.+-- |.. +..+.. --+| --+.+.+.++++.+++. +|+++=+=.+.-
T Consensus 25 P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~-~rAL~~g~~~~~~~~~~~~~r~~--~Pivlm~Y~N~i~ 101 (252)
T 3tha_A 25 PNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAA-KIALDQGVDIHSVFELLARIKTK--KALVFMVYYNLIF 101 (252)
T ss_dssp SCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHH-HHHHHTTCCHHHHHHHHHHCCCS--SEEEEECCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHH-HHHHHCCCCHHHHHHHHHHHhcC--CCEEEEeccCHHH
Confidence 4678899999988776 8999984432 211 111110 0111 13467777888877754 788774311100
Q ss_pred cccHHHHHHHHHHcCCcEEEE-------------------------Ec-ccc--------CC---------CCCCCCCCC
Q psy7343 284 VNKTVEYARMLERAGCQLLAV-------------------------HG-RTV--------DQ---------RGMNTGLAS 320 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~V-------------------------hg-Rt~--------~~---------~g~~~g~~~ 320 (487)
..-.+.+++.+.++|+|++.| -+ .+. .. .-+.+|...
T Consensus 102 ~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~ 181 (252)
T 3tha_A 102 SYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKS 181 (252)
T ss_dssp HHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSH
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCccc
Confidence 012455666666666666654 11 110 00 011334321
Q ss_pred ------HHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 321 ------WEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 321 ------~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
.+.++++|+..++||+..+||++++++.++. . +||||.+|++++.
T Consensus 182 ~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~-~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 182 VEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMR-K-VADGVIVGTSIVK 232 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHT-T-TSSEEEECHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHH-h-cCCEEEECHHHHH
Confidence 3678889999999999999999999999887 3 6999999998774
No 187
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=97.86 E-value=5.1e-05 Score=77.17 Aligned_cols=136 Identities=13% Similarity=0.057 Sum_probs=104.2
Q ss_pred CCCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
..|+...+...+++.+.+.++. +++.+..+.++.|+ +++.-.+.++++++.+ ++++.+...
T Consensus 129 ~v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~g~~~~l~vDan 192 (356)
T 3ro6_B 129 SLPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG----------------DEEQDFERLRRLHETLAGRAVVRVDPN 192 (356)
T ss_dssp CEEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred ceeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 3455556666788888776654 45558888887765 3455566777888876 577888776
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhc-CCcE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQT-GVAG 358 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~-Gad~ 358 (487)
-+|+..+..++++.+++.|++.|- | + + .+.+++..+++++.+++||.+++.+.+..++.++++.. ++|.
T Consensus 193 ~~~~~~~a~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~ 262 (356)
T 3ro6_B 193 QSYDRDGLLRLDRLVQELGIEFIE-------Q-P-F-PAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGI 262 (356)
T ss_dssp TCCCHHHHHHHHHHHHHTTCCCEE-------C-C-S-CTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------C-C-C-CCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCE
Confidence 678888889999999999999884 2 1 2 23478999999998999999999999999999999666 7999
Q ss_pred EEeccc
Q psy7343 359 VMTAEG 364 (487)
Q Consensus 359 VmiGRa 364 (487)
|++--+
T Consensus 263 v~~k~~ 268 (356)
T 3ro6_B 263 FNIKLM 268 (356)
T ss_dssp EEECHH
T ss_pred EEEccc
Confidence 987644
No 188
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.86 E-value=3.1e-05 Score=72.87 Aligned_cols=81 Identities=11% Similarity=0.021 Sum_probs=60.6
Q ss_pred ccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHH
Q psy7343 270 VQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVE 348 (487)
Q Consensus 270 ~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~ 348 (487)
.++|++... .+..++ ....+.|+|+|.+++- .. .. -.+.++.++..+ ++|+++.|||+ .+++.
T Consensus 103 ~g~~~i~G~------~t~~e~-~~A~~~Gad~v~~fpa--~~---~g---G~~~lk~l~~~~~~ipvvaiGGI~-~~n~~ 166 (207)
T 2yw3_A 103 RGVPYLPGV------LTPTEV-ERALALGLSALKFFPA--EP---FQ---GVRVLRAYAEVFPEVRFLPTGGIK-EEHLP 166 (207)
T ss_dssp HTCCEEEEE------CSHHHH-HHHHHTTCCEEEETTT--TT---TT---HHHHHHHHHHHCTTCEEEEBSSCC-GGGHH
T ss_pred hCCCEEecC------CCHHHH-HHHHHCCCCEEEEecC--cc---cc---CHHHHHHHHhhCCCCcEEEeCCCC-HHHHH
Confidence 467766543 244454 4456789999999541 11 11 257788999888 89999999997 69999
Q ss_pred HHHHhcCCcEEEecccccc
Q psy7343 349 ACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 349 ~~l~~~Gad~VmiGRa~l~ 367 (487)
+++ ..|+++|.+|++++.
T Consensus 167 ~~l-~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 167 HYA-ALPNLLAVGGSWLLQ 184 (207)
T ss_dssp HHH-TCSSBSCEEESGGGS
T ss_pred HHH-hCCCcEEEEehhhhC
Confidence 999 899999999999876
No 189
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=97.84 E-value=6.2e-05 Score=77.84 Aligned_cols=151 Identities=11% Similarity=0.089 Sum_probs=108.1
Q ss_pred CCCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCccee-----ecc-Cccccc--cCChHHHHHHHHHHhhhc--c
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVA-----KRG-HYGAYL--QDDWPLLTNLVSSLRQAV--Q 271 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~-----~~g-r~G~~l--~~d~~~i~eiv~~v~~~~--~ 271 (487)
..|+...+.+.+++++.+.++. +++.|..+.+..|++.... .++ .-|..+ ..+.+...++++++|+++ +
T Consensus 122 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d 201 (401)
T 3sbf_A 122 AIPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQ 201 (401)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCC
Confidence 4555555556788888876664 4556999999988732100 000 001111 112456677888899887 5
Q ss_pred CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHH
Q psy7343 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACL 351 (487)
Q Consensus 272 iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l 351 (487)
+++.+...-+++..+..++++.+++.|++.|-= + . .+.+++..+++++.+++||++.+.+.+..++.+++
T Consensus 202 ~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEq--------P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 271 (401)
T 3sbf_A 202 FHILHDVHERLFPNQAIQFAKEVEQYKPYFIED--------I-L-PPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLI 271 (401)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC--------S-S-CTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------C-C-ChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHH
Confidence 788887766788888999999999999988742 1 1 23467889999999999999999999999999999
Q ss_pred HhcCCcEEEecc
Q psy7343 352 AQTGVAGVMTAE 363 (487)
Q Consensus 352 ~~~Gad~VmiGR 363 (487)
+...+|.|++--
T Consensus 272 ~~~~~d~v~~k~ 283 (401)
T 3sbf_A 272 ANRRIDFIRCHV 283 (401)
T ss_dssp HTTCCSEECCCG
T ss_pred hcCCCCEEecCc
Confidence 777789887643
No 190
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.83 E-value=0.00012 Score=69.59 Aligned_cols=146 Identities=16% Similarity=0.206 Sum_probs=90.8
Q ss_pred eeeeeccCCHHHHHHHHHhhCCc-CcEEEeec--CCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc
Q psy7343 206 LIIQFCGNDSKNLTEAAKLAEPH-CDGIDINI--GCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ 282 (487)
Q Consensus 206 v~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~--GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~ 282 (487)
++.-+...|.+++.+.++.+.+. .|.|++.. |.=..+ +...+ ++++.+++.++.|+.+-+
T Consensus 13 i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~---------~~~~~----~~i~~l~~~~~~~~~v~l---- 75 (230)
T 1rpx_A 13 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPN---------ITIGP----LVVDSLRPITDLPLDVHL---- 75 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSC---------BCCCH----HHHHHHGGGCCSCEEEEE----
T ss_pred EEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcccc---------cccCH----HHHHHHHhccCCcEEEEE----
Confidence 34456666777777777776654 66665542 210000 00112 445556666666766654
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEcc--ccC------------------------------------------C-CCCCCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGR--TVD------------------------------------------Q-RGMNTG 317 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgR--t~~------------------------------------------~-~g~~~g 317 (487)
-+.+..+.++.+.++|+|+|++|+- ... . .+++.|
T Consensus 76 ~vnd~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g 155 (230)
T 1rpx_A 76 MIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGG 155 (230)
T ss_dssp ESSSHHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSS
T ss_pred EecCHHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCC
Confidence 2223556777777888888888876 200 0 012222
Q ss_pred C-CCH---HHHHHHHhhC-----CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 318 L-ASW---EHITAVRKAL-----TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 318 ~-~~~---~~i~~i~~~~-----~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
. ..| +.++++++.+ ++|+++.|||+ ++++.+++ +.|+|+|.+|+++...++
T Consensus 156 ~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~-~aGad~vvvgSaI~~a~d 215 (230)
T 1rpx_A 156 QSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVI-EAGANALVAGSAVFGAPD 215 (230)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHH-HHTCCEEEESHHHHTSSC
T ss_pred ccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHH-HcCCCEEEEChhhhCCCC
Confidence 2 133 5566677665 79999999998 78888887 679999999999887554
No 191
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.82 E-value=0.00014 Score=68.89 Aligned_cols=129 Identities=22% Similarity=0.226 Sum_probs=86.7
Q ss_pred HHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc---cccccHHHHHHHHH
Q psy7343 219 TEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY---QDVNKTVEYARMLE 295 (487)
Q Consensus 219 ~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~---~d~~~~~e~a~~le 295 (487)
.++.+.++...|+||+.+-. |.....+++.+.+-+.++++.++-+ .+|+-+. .+.++....++...
T Consensus 75 ~e~~~Ai~~GAdevd~vini----------g~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia~ 143 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHL----------GRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEAAI 143 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCH----------HHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecccc----------hhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHH
Confidence 44555566668888865322 2222347888777777788776422 3343221 13456777888889
Q ss_pred HcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh--CCCcEEEcCCCCCHHHHHHHHHhcCCc--EEEecccc
Q psy7343 296 RAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA--LTIPVIANGNIQCLADVEACLAQTGVA--GVMTAEGN 365 (487)
Q Consensus 296 ~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~--~~iPVi~nGgI~s~~da~~~l~~~Gad--~VmiGRa~ 365 (487)
++|+|.|-.+ .|...+.+..+.++.+++. .++||.++|||+|.+|+.+++ +.|++ |+..|+.+
T Consensus 144 eaGADfVKTs------TGf~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i-~aGa~RiG~S~g~~I 210 (220)
T 1ub3_A 144 RGGADFLKTS------TGFGPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRML-KAGASRLGTSSGVAL 210 (220)
T ss_dssp HHTCSEEECC------CSSSSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-HTTCSEEEETTHHHH
T ss_pred HhCCCEEEeC------CCCCCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHH-HCCCcccchhHHHHH
Confidence 9999999662 1112355677777777764 479999999999999999999 68999 55555543
No 192
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=97.79 E-value=0.00066 Score=68.03 Aligned_cols=186 Identities=15% Similarity=0.146 Sum_probs=103.8
Q ss_pred CCceEEecCCCCCCHHHHHHHHHcCC-CeEEcccee-ccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCcccccc
Q psy7343 78 SPRFILAPMVDASELPWRLLSRRYGS-HLCYTPMVS-AHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAP 155 (487)
Q Consensus 78 ~~~~~LAPMag~td~pFR~l~~~~Ga-dl~~TEMi~-a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lAp 155 (487)
+.++++|||+|+|+..++..+.+.|+ +++.+++.+ .+.+...-++..+. .+.|+.+++..... .
T Consensus 15 ~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~-----~~~p~~v~l~v~~~------~--- 80 (328)
T 2gjl_A 15 EHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCREL-----TDRPFGVNLTLLPT------Q--- 80 (328)
T ss_dssp SSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHH-----CSSCCEEEEEECCC------S---
T ss_pred CCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHh-----cCCCeEEEEecccc------c---
Confidence 56799999999999999999999986 888887755 43432111111111 24688888643210 0
Q ss_pred ccCCCc-hHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEe
Q psy7343 156 MVDASE-LPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDI 234 (487)
Q Consensus 156 ma~~td-~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~Idi 234 (487)
.-.+ ..+-.++.+.|++......- ++....+.++.. +.++++++. +.++ +.+..+...|+|-+
T Consensus 81 --~~~~~~~~~~~~~~~g~d~V~~~~g-------~p~~~~~~l~~~--gi~vi~~v~--t~~~---a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 81 --KPVPYAEYRAAIIEAGIRVVETAGN-------DPGEHIAEFRRH--GVKVIHKCT--AVRH---ALKAERLGVDAVSI 144 (328)
T ss_dssp --SCCCHHHHHHHHHHTTCCEEEEEES-------CCHHHHHHHHHT--TCEEEEEES--SHHH---HHHHHHTTCSEEEE
T ss_pred --cCccHHHHHHHHHhcCCCEEEEcCC-------CcHHHHHHHHHc--CCCEEeeCC--CHHH---HHHHHHcCCCEEEE
Confidence 0011 12334566778776543221 222222233322 567776652 3332 22222333777766
Q ss_pred ecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 235 NIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 235 N~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
. |. .. -|..|..-..+++ ++..+++.+++||++.+ .+.+..++.+.+. .|+|+|.+ |+.
T Consensus 145 ~-g~-~~---GG~~G~~~~~~~~----~l~~v~~~~~iPviaaG----GI~~~~~v~~al~-~GAdgV~v-Gs~ 203 (328)
T 2gjl_A 145 D-GF-EC---AGHPGEDDIPGLV----LLPAAANRLRVPIIASG----GFADGRGLVAALA-LGADAINM-GTR 203 (328)
T ss_dssp E-CT-TC---SBCCCSSCCCHHH----HHHHHHTTCCSCEEEES----SCCSHHHHHHHHH-HTCSEEEE-SHH
T ss_pred E-CC-CC---CcCCCCccccHHH----HHHHHHHhcCCCEEEEC----CCCCHHHHHHHHH-cCCCEEEE-CHH
Confidence 4 21 00 0111211112344 44556667799999998 5656677777665 79999999 764
No 193
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=97.77 E-value=0.00045 Score=70.71 Aligned_cols=134 Identities=10% Similarity=0.120 Sum_probs=100.1
Q ss_pred CCeeeeeccCCHHHHHHHHH-hhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeec
Q psy7343 204 RPLIIQFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRI 280 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~ 280 (487)
.|+...+...++++..+.++ .+++.+..+.+..|. .+++.-.+.++++++.+ ++++.+...-
T Consensus 136 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avR~~~g~~~~l~vDan~ 200 (377)
T 3my9_A 136 IPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGV---------------KPHAEELRILETMRGEFGERIDLRLDFNQ 200 (377)
T ss_dssp EEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCC---------------CcHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 34444454457777665554 445557777766554 13444556777788776 5778887766
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
+|+..+..++++.+++.|++.|- | + . .+.+++..+++++.+++||.+.+.+.+..++.++++...+|.|+
T Consensus 201 ~~~~~~A~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ 270 (377)
T 3my9_A 201 ALTPFGAMKILRDVDAFRPTFIE-------Q-P-V-PRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAIS 270 (377)
T ss_dssp CCCTTTHHHHHHHHHTTCCSCEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEE
T ss_pred CcCHHHHHHHHHHHhhcCCCEEE-------C-C-C-CccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEE
Confidence 78888999999999999998874 2 1 1 23478999999999999999999999999999999777899988
Q ss_pred ec
Q psy7343 361 TA 362 (487)
Q Consensus 361 iG 362 (487)
+-
T Consensus 271 ~k 272 (377)
T 3my9_A 271 VK 272 (377)
T ss_dssp CC
T ss_pred ec
Confidence 64
No 194
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.76 E-value=4.4e-05 Score=72.61 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=63.9
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
+....+...+-.|...|-+.+ +. ..+ +.+.++++++.+ ++||++.|||+|++++++++ .|||+|.+|++
T Consensus 141 ~~~~~a~~a~~~g~~~VYld~-sG-----~~~--~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~--~gAD~VVVGSa 210 (228)
T 3vzx_A 141 DIVAYARVSELLQLPIFYLEY-SG-----VLG--DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA--EHADVIVVGNA 210 (228)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC-TT-----SCC--CHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH--TTCSEEEECTH
T ss_pred HHHHHHHHHHHcCCCEEEecC-CC-----CcC--CHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH--hCCCEEEEChH
Confidence 445556666667888887755 21 112 789999999999 89999999999999999998 49999999999
Q ss_pred cccCccccc
Q psy7343 365 NLYNPALFT 373 (487)
Q Consensus 365 ~l~~P~lf~ 373 (487)
+..||.++.
T Consensus 211 ~v~~p~~~~ 219 (228)
T 3vzx_A 211 VYEDFDRAL 219 (228)
T ss_dssp HHHCHHHHH
T ss_pred HhcCHHHHH
Confidence 999998865
No 195
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=97.76 E-value=0.00022 Score=73.46 Aligned_cols=140 Identities=13% Similarity=0.085 Sum_probs=107.4
Q ss_pred CCCeeeeec---cCCHHHHHHHH-Hh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEE
Q psy7343 203 DRPLIIQFC---GNDSKNLTEAA-KL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVS 275 (487)
Q Consensus 203 ~~Pv~Vqi~---g~d~~~~~~aa-~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~ 275 (487)
..|+...+. ..+++++.+.+ +. +++.+..+.+..|++... ...+++.-.+.++++++++ ++++.
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~l~ 195 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAVIG 195 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCCEE
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCeEE
Confidence 456655542 35678887766 54 444589999998885321 2346777788888999886 67888
Q ss_pred EEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcC
Q psy7343 276 CKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTG 355 (487)
Q Consensus 276 vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~G 355 (487)
+...-+++..+..++++.+++.|++.|-= + . .+.+++..+++++.+++||.+.+.+.+.+++.++++..
T Consensus 196 vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~- 264 (393)
T 4dwd_A 196 FDANNGYSVGGAIRVGRALEDLGYSWFEE--------P-V-QHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG- 264 (393)
T ss_dssp EECTTCCCHHHHHHHHHHHHHTTCSEEEC--------C-S-CTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-
T ss_pred EECCCCCCHHHHHHHHHHHHhhCCCEEEC--------C-C-CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-
Confidence 87766788888899999999999998842 1 2 23478999999999999999999999999999999666
Q ss_pred CcEEEec
Q psy7343 356 VAGVMTA 362 (487)
Q Consensus 356 ad~VmiG 362 (487)
+|.|++-
T Consensus 265 ~d~v~~k 271 (393)
T 4dwd_A 265 VRMVQPD 271 (393)
T ss_dssp CCEECCC
T ss_pred CCEEEeC
Confidence 9988754
No 196
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=97.74 E-value=0.00011 Score=76.81 Aligned_cols=124 Identities=16% Similarity=0.171 Sum_probs=95.9
Q ss_pred cCCHHHHHHHHHhhC-CcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 212 GNDSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 212 g~d~~~~~~aa~~~~-~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
+.+++++.+.++.+. +.|+.|.|+.|. +.+...+.++++++++ ++++.+...-+++.++..
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 259 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAI 259 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHH
Confidence 347888887766554 458999888763 3555667788888876 577777655567777888
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++++.++++|++.|-- + . ...+++..+++++.+ ++||++.+.+.+.+++.++++...+|.|++
T Consensus 260 ~~~~~l~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 323 (441)
T 2hxt_A 260 DWMRQLAEFDIAWIEE--------P-T-SPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQI 323 (441)
T ss_dssp HHHHTTGGGCCSCEEC--------C-S-CTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECC
T ss_pred HHHHHHHhcCCCeeeC--------C-C-CHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 9999999999997642 1 2 235789999999987 699999999999999999997777898876
No 197
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.73 E-value=0.00015 Score=69.27 Aligned_cols=143 Identities=13% Similarity=0.200 Sum_probs=86.8
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ 282 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~ 282 (487)
+.|+.+-+..+|++.+.+.+..+ .+|+|-+|.... .. +...+.++.+++. ++.+.+-+
T Consensus 62 ~~~~~vhlmv~dp~~~i~~~~~a--Gadgv~vh~e~~--------~~-------~~~~~~~~~i~~~-g~~~gv~~---- 119 (230)
T 1tqj_A 62 KKTLDVHLMIVEPEKYVEDFAKA--GADIISVHVEHN--------AS-------PHLHRTLCQIREL-GKKAGAVL---- 119 (230)
T ss_dssp CSEEEEEEESSSGGGTHHHHHHH--TCSEEEEECSTT--------TC-------TTHHHHHHHHHHT-TCEEEEEE----
T ss_pred CCcEEEEEEccCHHHHHHHHHHc--CCCEEEECcccc--------cc-------hhHHHHHHHHHHc-CCcEEEEE----
Confidence 46888888888887776555433 245555553310 00 1233455555543 55555544
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-----CCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-----TIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-----~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
+..+..+..+.+. .++|.|.+-.......+..-.+...+.++++++.. ++||.+-|||+. +++.++. +.|||
T Consensus 120 ~p~t~~e~~~~~~-~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~-~aGad 196 (230)
T 1tqj_A 120 NPSTPLDFLEYVL-PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVL-EAGAN 196 (230)
T ss_dssp CTTCCGGGGTTTG-GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHH-HHTCC
T ss_pred eCCCcHHHHHHHH-hcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHH-HcCCC
Confidence 2223333333333 37999876333211111011223468888888876 899999999997 8899888 78999
Q ss_pred EEEeccccccCcc
Q psy7343 358 GVMTAEGNLYNPA 370 (487)
Q Consensus 358 ~VmiGRa~l~~P~ 370 (487)
++.+|++++..++
T Consensus 197 ~vvvGSai~~a~d 209 (230)
T 1tqj_A 197 AIVAGSAVFNAPN 209 (230)
T ss_dssp EEEESHHHHTSSC
T ss_pred EEEECHHHHCCCC
Confidence 9999999887655
No 198
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=97.73 E-value=0.00014 Score=75.52 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=101.7
Q ss_pred CCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccc-cCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 213 NDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYL-QDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 213 ~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l-~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
.+++++.+.++. +++.+..+.++.|++.. +..|... ..+++...+.++++|+++ ++++.+...-+++..+..
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~ 218 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYT----AYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAI 218 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCB----TTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCc----cccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 478888776654 44559999999887532 1112111 123566677888898887 577877665577888889
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
++++.+++.|++.|-- + . ...+++..+++++.+++||++.+.+.+..++.++++...+|.|++-
T Consensus 219 ~~~~~L~~~~i~~iEe--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d 282 (412)
T 4e4u_A 219 RLAKRLEKYDPLWFEE--------P-V-PPGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLN 282 (412)
T ss_dssp HHHHHHGGGCCSEEEC--------C-S-CSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHhhhcCCcEEEC--------C-C-ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999998852 1 1 2347899999999999999999999999999999976778988653
No 199
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=97.72 E-value=0.00031 Score=71.71 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=99.1
Q ss_pred CeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecc
Q psy7343 205 PLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIY 281 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~ 281 (487)
|+...+...+++++.+.++. +++.+..+.+..|+ +++.-.+.++++++++ ++++.+...-+
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~g~~~~l~vDaN~~ 194 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGG----------------SKELDVERIRMIREAAGDSITLRIDANQG 194 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 44445555688888776654 44557777776654 2444556777888877 56777766556
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++..+..++++.+++.|++.|- | + . ...+++..+++++.+++||.+.+.+.+..++.++++...+|.|++
T Consensus 195 ~~~~~A~~~~~~l~~~~i~~iE-------q-P-~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 264 (368)
T 3q45_A 195 WSVETAIETLTLLEPYNIQHCE-------E-P-V-SRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNL 264 (368)
T ss_dssp BCHHHHHHHHHHHGGGCCSCEE-------C-C-B-CGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CChHHHHHHHHHHhhcCCCEEE-------C-C-C-ChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEe
Confidence 7878888999999999998884 1 1 1 223678889999999999999999999999999997778999986
Q ss_pred cc
Q psy7343 362 AE 363 (487)
Q Consensus 362 GR 363 (487)
--
T Consensus 265 k~ 266 (368)
T 3q45_A 265 KL 266 (368)
T ss_dssp CT
T ss_pred ch
Confidence 43
No 200
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.71 E-value=5.7e-05 Score=80.03 Aligned_cols=98 Identities=17% Similarity=0.206 Sum_probs=67.9
Q ss_pred HHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCC-------CCCCCCCCCH---HHHHHHH
Q psy7343 259 LTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQ-------RGMNTGLASW---EHITAVR 328 (487)
Q Consensus 259 i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~-------~g~~~g~~~~---~~i~~i~ 328 (487)
..+.++.+++..++||++|. +.+. +.++.+. |+|+|.+ |..... .++ |.+.. ..+.++.
T Consensus 256 ~L~~I~~l~~~~~vpvi~k~-----v~~~-~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~--g~~~~~~l~~~~~~~ 324 (486)
T 2cu0_A 256 AIKSMKEMRQKVDADFIVGN-----IANP-KAVDDLT--FADAVKV-GIGPGSICTTRIVAGV--GVPQITAVAMVADRA 324 (486)
T ss_dssp HHHHHHHHHHTCCSEEEEEE-----ECCH-HHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCC--CCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhCCccccCC-----cCCH-HHHHHhh--CCCeEEE-eeeeccceeeeEEeec--CcchHHHHHHHHHHH
Confidence 34445667777789999873 3333 3344444 9999999 643221 111 22222 3344555
Q ss_pred hhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 329 ~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
+..++|||+.|||.+..|+.+++ ..|||+||+|+.++..
T Consensus 325 ~~~~vpVia~GGi~~~~di~kal-alGA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 325 QEYGLYVIADGGIRYSGDIVKAI-AAGADAVMLGNLLAGT 363 (486)
T ss_dssp HHHTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTTTB
T ss_pred HHcCCcEEecCCCCCHHHHHHHH-HcCCCceeeChhhhcC
Confidence 55689999999999999999999 6999999999998864
No 201
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=97.71 E-value=0.00032 Score=71.63 Aligned_cols=135 Identities=14% Similarity=0.182 Sum_probs=100.3
Q ss_pred CCeeeeeccCCH-HHHHHHHHhhC-CcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 204 RPLIIQFCGNDS-KNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~g~d~-~~~~~aa~~~~-~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
.|+...+...++ +.+.++++.++ ..+..+.+..|+ .+++.-.+.++++++.+ ++++.+...
T Consensus 132 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avR~~~g~~~~l~vDan 196 (370)
T 1chr_A 132 IPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGF---------------RSPQDDLIHMEALSNSLGSKAYLRVDVN 196 (370)
T ss_dssp EEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSS---------------SCSHHHHHHHHHHHHHSSTTCCEEEECT
T ss_pred eeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCC---------------CCHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 455444443344 45566666666 446666666554 13555567788888887 478888877
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+|+..+..++++.+++.|++.|- | + . ...+++..+++++.+++||.+.+.+.+..++.++++..++|.|
T Consensus 197 ~~~~~~~a~~~~~~l~~~~i~~iE-------q-P-~-~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v 266 (370)
T 1chr_A 197 QAWDEQVASVYIPELEALGVELIE-------Q-P-V-GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVF 266 (370)
T ss_dssp TCCCTTHHHHHTHHHHTTTEEEEE-------C-C-S-CTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEE-------C-C-C-CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 788888999999999999988774 2 1 2 2357889999999999999999999999999999976779999
Q ss_pred Eecc
Q psy7343 360 MTAE 363 (487)
Q Consensus 360 miGR 363 (487)
++--
T Consensus 267 ~~k~ 270 (370)
T 1chr_A 267 SLKL 270 (370)
T ss_dssp EECT
T ss_pred EECc
Confidence 8753
No 202
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=97.70 E-value=0.00011 Score=69.84 Aligned_cols=178 Identities=15% Similarity=0.085 Sum_probs=100.0
Q ss_pred eEEecCCCCCCHHHHHHHH---HcCCCe--EEccceec-cccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCccccc
Q psy7343 81 FILAPMVDASELPWRLLSR---RYGSHL--CYTPMVSA-HQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILA 154 (487)
Q Consensus 81 ~~LAPMag~td~pFR~l~~---~~Gadl--~~TEMi~a-~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lA 154 (487)
.+|.|+ .|+.+||.+|+ +||++. ++++|+.. ...+. . .+.... .+.|+.+|+.. .
T Consensus 11 t~l~p~--~t~~~i~~l~~~a~~~g~~~v~v~~~~v~~~~~~l~-~---v~v~~v--~~~P~g~~~~~------~----- 71 (225)
T 1mzh_A 11 AALKPH--LSEKEIEEFVLKSEELGIYAVCVNPYHVKLASSIAK-K---VKVCCV--IGFPLGLNKTS------V----- 71 (225)
T ss_dssp EECCTT--CCHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHCS-S---SEEEEE--ESTTTCCSCHH------H-----
T ss_pred cccCCC--CCHHHHHHHHHHHHHhCCeEEEECHHHHHHHHHHhc-C---CceeeE--ecCCCCccchh------h-----
Confidence 457888 68999999999 799987 66777654 33322 0 000000 01233222100 0
Q ss_pred cccCCCchHHHHHHHHhCCccceecc-ccchhhh-cChhHHHHHHh--cCCCCCCeeeee---c-cCCHHHHHHHHHhhC
Q psy7343 155 PMVDASELPWRLLSRRYGSHLCYTPM-VSAHQFI-ADKKLRQEILM--STPEDRPLIIQF---C-GNDSKNLTEAAKLAE 226 (487)
Q Consensus 155 pma~~td~~fr~i~~~~Ga~l~~t~~-v~~~~Ll-~~~~~~~~~l~--~~~~~~Pv~Vqi---~-g~d~~~~~~aa~~~~ 226 (487)
....-..+.+.|++..- + ++-..+. .+.+...+.++ ....+ |+++|+ . +.+.++..++++.++
T Consensus 72 ------k~~~~~~A~~~Gad~Id--~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~ 142 (225)
T 1mzh_A 72 ------KVKEAVEAVRDGAQELD--IVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICI 142 (225)
T ss_dssp ------HHHHHHHHHHTTCSEEE--EECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHH
T ss_pred ------hHHHHHHHHHcCCCEEE--EEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHH
Confidence 00001223346664422 2 1211121 12233333332 11223 899998 4 457778889999888
Q ss_pred Cc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEE
Q psy7343 227 PH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAV 304 (487)
Q Consensus 227 ~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~V 304 (487)
++ .|+|..|.|- . .|+ .+++.+..+.+.+. .++||++.+ ++.+..++.++++ +|+|.|-+
T Consensus 143 eaGad~I~tstg~-~-------~gg---a~~~~i~~v~~~v~--~~ipVia~G----GI~t~~da~~~l~-aGA~~iG~ 203 (225)
T 1mzh_A 143 EAGADFIKTSTGF-A-------PRG---TTLEEVRLIKSSAK--GRIKVKASG----GIRDLETAISMIE-AGADRIGT 203 (225)
T ss_dssp HHTCSEEECCCSC-S-------SSC---CCHHHHHHHHHHHT--TSSEEEEES----SCCSHHHHHHHHH-TTCSEEEE
T ss_pred HhCCCEEEECCCC-C-------CCC---CCHHHHHHHHHHhC--CCCcEEEEC----CCCCHHHHHHHHH-hCchHHHH
Confidence 87 7888766543 0 121 46777666554432 268999997 7888888888886 89996644
No 203
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.70 E-value=0.00033 Score=70.67 Aligned_cols=188 Identities=12% Similarity=0.082 Sum_probs=96.4
Q ss_pred CCceEEecCCCCCCHHHHH-HHHHcCCCeEEccceeccccccCcHHHHHHhhhC-CCCCceeeeeccccCCCCCcccccc
Q psy7343 78 SPRFILAPMVDASELPWRL-LSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST-PEDRPLIIQRTIFPRLGSPRFILAP 155 (487)
Q Consensus 78 ~~~~~LAPMag~td~pFR~-l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~-~~e~p~~vQl~~~~~~g~~~~~lAp 155 (487)
+.|+++|||+++|+..|+. +++..|.++++++|... ...++... ...-|+.+|+ +..+..
T Consensus 46 ~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~---------~~~~i~~~~~~g~~v~v~~------g~~~~~--- 107 (336)
T 1ypf_A 46 KLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEK---------RISFIRDMQSRGLIASISV------GVKEDE--- 107 (336)
T ss_dssp SSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGG---------HHHHHHHHHHTTCCCEEEE------CCSHHH---
T ss_pred cCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHH---------HHHHHHHHHhcCCeEEEeC------CCCHHH---
Confidence 5689999999999999965 57777889998887532 11111111 1233677774 211110
Q ss_pred ccCCCchHHHHHHHHhC--CccceeccccchhhhcChhHHHHHHhc--CCCCCCeeeeeccCCHHHHHHHHHhhCCc-Cc
Q psy7343 156 MVDASELPWRLLSRRYG--SHLCYTPMVSAHQFIADKKLRQEILMS--TPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CD 230 (487)
Q Consensus 156 ma~~td~~fr~i~~~~G--a~l~~t~~v~~~~Ll~~~~~~~~~l~~--~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d 230 (487)
........+.| ++..--.+ +. -++....+.++. ...+.|++++=...++ +.|+.++++ +|
T Consensus 108 ------~~~a~~~~~~g~~~~~i~i~~--~~---G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~----e~A~~a~~aGad 172 (336)
T 1ypf_A 108 ------YEFVQQLAAEHLTPEYITIDI--AH---GHSNAVINMIQHIKKHLPESFVIAGNVGTP----EAVRELENAGAD 172 (336)
T ss_dssp ------HHHHHHHHHTTCCCSEEEEEC--SS---CCSHHHHHHHHHHHHHCTTSEEEEEEECSH----HHHHHHHHHTCS
T ss_pred ------HHHHHHHHhcCCCCCEEEEEC--CC---CCcHHHHHHHHHHHHhCCCCEEEECCcCCH----HHHHHHHHcCCC
Confidence 01112233455 44321111 11 123333333321 1112233333112333 344455454 78
Q ss_pred EEEee--cCCCcceeec-cCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 231 GIDIN--IGCPQMVAKR-GHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 231 ~IdiN--~GcP~~i~~~-gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
+|.+. .|- +..+.. ...| ...| ..+.+..+++.+++||++.+ ++.+..|+++.+. .|||+|++ ||
T Consensus 173 ~Ivvs~hgG~-~~~~~~~~~~g---~~g~--~~~~l~~v~~~~~ipVIa~G----GI~~g~Dv~kala-lGAdaV~i-Gr 240 (336)
T 1ypf_A 173 ATKVGIGPGK-VCITKIKTGFG---TGGW--QLAALRWCAKAASKPIIADG----GIRTNGDVAKSIR-FGATMVMI-GS 240 (336)
T ss_dssp EEEECSSCST-TCHHHHHHSCS---STTC--HHHHHHHHHHTCSSCEEEES----CCCSTHHHHHHHH-TTCSEEEE-SG
T ss_pred EEEEecCCCc-eeecccccCcC---Cchh--HHHHHHHHHHHcCCcEEEeC----CCCCHHHHHHHHH-cCCCEEEe-Ch
Confidence 88772 111 100000 0000 0101 12344445666799999997 7888899998886 79999999 88
Q ss_pred ccC
Q psy7343 308 TVD 310 (487)
Q Consensus 308 t~~ 310 (487)
...
T Consensus 241 ~~l 243 (336)
T 1ypf_A 241 LFA 243 (336)
T ss_dssp GGT
T ss_pred hhh
Confidence 543
No 204
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.69 E-value=6.9e-05 Score=72.88 Aligned_cols=163 Identities=18% Similarity=0.206 Sum_probs=92.9
Q ss_pred HHHhcCCCCCCeeeeeccCCHH-HHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCC---hHHHHHHHHHHhhh
Q psy7343 195 EILMSTPEDRPLIIQFCGNDSK-NLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDD---WPLLTNLVSSLRQA 269 (487)
Q Consensus 195 ~~l~~~~~~~Pv~Vqi~g~d~~-~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d---~~~i~eiv~~v~~~ 269 (487)
+++.... +.||..|+.+.||- .+....+.+++. +.++ +|. |..-...|.++..|..+ .+...++++..++.
T Consensus 87 evlp~v~-~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~ 162 (286)
T 2p10_A 87 EVLPVVR-HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL 162 (286)
T ss_dssp HHGGGCS-SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred hhhccCC-CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EEC--CCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC
Confidence 5554433 78999998876663 333344556565 8899 885 32223345555555333 44455555544432
Q ss_pred ccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcc-ccCCCCCCCCCCC----HHHHHHHHhhC-----CCcEEE-c
Q psy7343 270 VQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR-TVDQRGMNTGLAS----WEHITAVRKAL-----TIPVIA-N 338 (487)
Q Consensus 270 ~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgR-t~~~~g~~~g~~~----~~~i~~i~~~~-----~iPVi~-n 338 (487)
++--++-. ...+-++.+.++|+|.|.+|.- |....=+...... -+.+.++.+.+ ++.|+. .
T Consensus 163 -gL~Ti~~v-------~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~g 234 (286)
T 2p10_A 163 -DLLTTPYV-------FSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHG 234 (286)
T ss_dssp -TCEECCEE-------CSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEES
T ss_pred -CCeEEEec-------CCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 33222221 2244455677899999999964 3221100111112 23444443332 555554 4
Q ss_pred CCCCCHHHHHHHHHhc-CCcEEEeccccccCc
Q psy7343 339 GNIQCLADVEACLAQT-GVAGVMTAEGNLYNP 369 (487)
Q Consensus 339 GgI~s~~da~~~l~~~-Gad~VmiGRa~l~~P 369 (487)
|+|.+++|++.+++.+ |++|+..+.++..=|
T Consensus 235 GpIstpeDv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 235 GPIANPEDARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp TTCCSHHHHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred CCCCCHHHHHHHHhcCCCccEEEeehhhhcCC
Confidence 5999999999999543 799999999876655
No 205
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.69 E-value=1.3e-05 Score=92.47 Aligned_cols=190 Identities=15% Similarity=0.157 Sum_probs=110.7
Q ss_pred HcCCC---eEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCccccccccCCCchHHHHHHHHhCCcc-
Q psy7343 100 RYGSH---LCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHL- 175 (487)
Q Consensus 100 ~~Gad---l~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lApma~~td~~fr~i~~~~Ga~l- 175 (487)
++|++ +.++||++..++..-.+...+..... .+.|+++|+.. +..+.-.+.+ .......|++.
T Consensus 599 ~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~-~~~~~i~~i~~----g~~~~~~~~~--------a~~~~~~g~d~i 665 (1025)
T 1gte_A 599 MYGPGQSSFLNIELISEKTAAYWCQSVTELKADF-PDNIVIASIMC----SYNKNDWMEL--------SRKAEASGADAL 665 (1025)
T ss_dssp CCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHC-TTSEEEEEECC----CSCHHHHHHH--------HHHHHHTTCSEE
T ss_pred ccCCchhheeeeccccchhHHHHHHHHHHHHhcC-CCCCeEEEecC----CCCHHHHHHH--------HHHHHhcCCCEE
Confidence 36654 89999999888744322222222222 35688887621 1111111111 01112234322
Q ss_pred -----ceeccc---cchhhhcChhHHHHHHhc--CCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEe-ecC------
Q psy7343 176 -----CYTPMV---SAHQFIADKKLRQEILMS--TPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDI-NIG------ 237 (487)
Q Consensus 176 -----~~t~~v---~~~~Ll~~~~~~~~~l~~--~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~Idi-N~G------ 237 (487)
||..+. .|.++.++++...++++. ...+.||+||+.. +.+++.+.++.+++. +|+|.+ |-.
T Consensus 666 ein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~-~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~ 744 (1025)
T 1gte_A 666 ELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTP-NVTDIVSIARAAKEGGADGVTATNTVSGLMGL 744 (1025)
T ss_dssp EEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECS-CSSCHHHHHHHHHHHTCSEEEECCCEEECCCB
T ss_pred EEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCC-ChHHHHHHHHHHHHcCCCEEEEeccccccccc
Confidence 443322 256677888888777752 2236899999985 333566777777665 788887 210
Q ss_pred ------CCcceeeccCcc--c-cccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 238 ------CPQMVAKRGHYG--A-YLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 238 ------cP~~i~~~gr~G--~-~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
-|. +..|++.. + .....+....+++..+++.+ ++||++.+ ++.+..++.+.+. +|+|+|+| ||
T Consensus 745 ~~~~~~~~~-~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~G----GI~s~~da~~~l~-~Ga~~v~v-g~ 817 (1025)
T 1gte_A 745 KADGTPWPA-VGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATG----GIDSAESGLQFLH-SGASVLQV-CS 817 (1025)
T ss_dssp CTTSCBSSC-BTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEES----SCCSHHHHHHHHH-TTCSEEEE-SH
T ss_pred ccccccccc-ccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEec----CcCCHHHHHHHHH-cCCCEEEE-ee
Confidence 110 00133211 1 12334555567778888888 89999998 8889999999887 89999999 88
Q ss_pred ccC
Q psy7343 308 TVD 310 (487)
Q Consensus 308 t~~ 310 (487)
...
T Consensus 818 ~~l 820 (1025)
T 1gte_A 818 AVQ 820 (1025)
T ss_dssp HHH
T ss_pred ccc
Confidence 543
No 206
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.67 E-value=0.00012 Score=70.58 Aligned_cols=84 Identities=10% Similarity=0.040 Sum_probs=60.4
Q ss_pred cccHHHHHHHHHHcCCcEEEEEccccC-CCCCCCCCCCHHHHHHHHhh--CCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 284 VNKTVEYARMLERAGCQLLAVHGRTVD-QRGMNTGLASWEHITAVRKA--LTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~VhgRt~~-~~g~~~g~~~~~~i~~i~~~--~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
..+..+ +....+.|+|+|.+...... .+... .+..++.++++++. .++||++-||| +.+++.+++ ..|+|+|.
T Consensus 142 ~ht~~E-a~~A~~~GaDyI~vgpvf~T~tK~~~-~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~-~aGa~gva 217 (243)
T 3o63_A 142 THDPDQ-VAAAAAGDADYFCVGPCWPTPTKPGR-AAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVL-DAGARRIV 217 (243)
T ss_dssp ECSHHH-HHHHHHSSCSEEEECCSSCCCC------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHH-HTTCCCEE
T ss_pred CCCHHH-HHHHhhCCCCEEEEcCccCCCCCCCc-chhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHH-HcCCCEEE
Confidence 335555 45566789999999332111 11111 23468999999887 58999999999 899999999 79999999
Q ss_pred eccccccCccc
Q psy7343 361 TAEGNLYNPAL 371 (487)
Q Consensus 361 iGRa~l~~P~l 371 (487)
+|++++..++.
T Consensus 218 v~sai~~a~dp 228 (243)
T 3o63_A 218 VVRAITSADDP 228 (243)
T ss_dssp ESHHHHTCSSH
T ss_pred EeHHHhCCCCH
Confidence 99999876543
No 207
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=97.67 E-value=0.00047 Score=70.30 Aligned_cols=197 Identities=15% Similarity=0.110 Sum_probs=104.3
Q ss_pred CCceEEecCCC-CCCHHHHHHHHHcCC-CeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCC-CCccc--
Q psy7343 78 SPRFILAPMVD-ASELPWRLLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLG-SPRFI-- 152 (487)
Q Consensus 78 ~~~~~LAPMag-~td~pFR~l~~~~Ga-dl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g-~~~~~-- 152 (487)
+.++++|||+| +|+..|+..+.+.|+ +++.+.|++.+.+...-++..... +.|+.+++....... +...+
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~-----~~p~gVnl~~~~~~~~~~~~~~~ 84 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLT-----GRPFGVNVFMPQPELAESGAVEV 84 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHC-----CSCEEEEEECCCCCC---CHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhC-----CCCeEEEEecCCCCcccHHHHHH
Confidence 55799999995 999999999999987 888899998887744333333221 368899864321100 00000
Q ss_pred ----c------------ccccCCCch---HHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeeccC
Q psy7343 153 ----L------------APMVDASEL---PWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGN 213 (487)
Q Consensus 153 ----l------------Apma~~td~---~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~ 213 (487)
+ .|.. ..+. ..-.+..+.|++.....+.. ...+....+.. .+.++++++.
T Consensus 85 ~~~~l~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~g~~~V~~~~g~-----~~~~~i~~~~~---~g~~v~~~v~-- 153 (369)
T 3bw2_A 85 YAHQLAGEAAWYETELGDPDG-GRDDGYDAKLAVLLDDPVPVVSFHFGV-----PDREVIARLRR---AGTLTLVTAT-- 153 (369)
T ss_dssp HHHHTHHHHHHTTCCCCCSCS-CSSTTHHHHHHHHHHSCCSEEEEESSC-----CCHHHHHHHHH---TTCEEEEEES--
T ss_pred HHHHHHHHHHHcCCCcCcccc-cccccHHHHHHHHHhcCCCEEEEeCCC-----CcHHHHHHHHH---CCCeEEEECC--
Confidence 0 0000 0011 11234445565543322211 01122222221 2467777653
Q ss_pred CHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccc---------cCChHHHHHHHHHHhhhccCcEEEEeecccc
Q psy7343 214 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYL---------QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQD 283 (487)
Q Consensus 214 d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l---------~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d 283 (487)
+.++ ++.+++ ..|.|-++..- . -|..|... ...++. ++.+++.+++||++.+ .
T Consensus 154 t~~~----a~~a~~~GaD~i~v~g~~-~----GGh~g~~~~~~~~~~~~~~~~~~----l~~i~~~~~iPViaaG----G 216 (369)
T 3bw2_A 154 TPEE----ARAVEAAGADAVIAQGVE-A----GGHQGTHRDSSEDDGAGIGLLSL----LAQVREAVDIPVVAAG----G 216 (369)
T ss_dssp SHHH----HHHHHHTTCSEEEEECTT-C----SEECCCSSCCGGGTTCCCCHHHH----HHHHHHHCSSCEEEES----S
T ss_pred CHHH----HHHHHHcCCCEEEEeCCC-c----CCcCCCcccccccccccccHHHH----HHHHHHhcCceEEEEC----C
Confidence 3332 223333 37888774210 0 00001110 111444 4445666789999998 4
Q ss_pred cccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 284 VNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
+.+..++.+.+. .|+|+|.+ ||.-
T Consensus 217 I~~~~~~~~~l~-~GAd~V~v-Gs~~ 240 (369)
T 3bw2_A 217 IMRGGQIAAVLA-AGADAAQL-GTAF 240 (369)
T ss_dssp CCSHHHHHHHHH-TTCSEEEE-SHHH
T ss_pred CCCHHHHHHHHH-cCCCEEEE-ChHH
Confidence 545666666655 89999999 7743
No 208
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.66 E-value=0.0014 Score=60.92 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=81.6
Q ss_pred CCCeeeeeccCC-HHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc
Q psy7343 203 DRPLIIQFCGND-SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY 281 (487)
Q Consensus 203 ~~Pv~Vqi~g~d-~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~ 281 (487)
+.|+.+-+...| ++.+.+.+..+ .+|+|-+ |...+ .+.+.++++.+++. +.++.+-+ .
T Consensus 53 ~~~i~~~l~~~di~~~~~~~a~~~--Gad~v~v----------h~~~~------~~~~~~~~~~~~~~-g~~~gv~~--~ 111 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEADIAFKA--GADLVTV----------LGSAD------DSTIAGAVKAAQAH-NKGVVVDL--I 111 (207)
T ss_dssp TSEEEEEEEECSCHHHHHHHHHHT--TCSEEEE----------ETTSC------HHHHHHHHHHHHHH-TCEEEEEC--T
T ss_pred CCeEEEEEEecCccHHHHHHHHhC--CCCEEEE----------eccCC------hHHHHHHHHHHHHc-CCceEEEE--e
Confidence 567776444346 66655433322 2444444 43211 23445555555543 55553322 1
Q ss_pred cccccHHHHHHHHHHcCCcEEEE-EccccCCCCCCCCCCCH-HHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAV-HGRTVDQRGMNTGLASW-EHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~V-hgRt~~~~g~~~g~~~~-~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
+..+..+.++.+++.|+|.|.+ .+.+... .|.... +.++++++. ++|+++.|||+ ++++.+++ +.|||+|
T Consensus 112 -s~~~p~~~~~~~~~~g~d~v~~~~~~~~~~----~g~~~~~~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~-~aGad~v 183 (207)
T 3ajx_A 112 -GIEDKATRAQEVRALGAKFVEMHAGLDEQA----KPGFDLNGLLAAGEKA-RVPFSVAGGVK-VATIPAVQ-KAGAEVA 183 (207)
T ss_dssp -TCSSHHHHHHHHHHTTCSEEEEECCHHHHT----STTCCTHHHHHHHHHH-TSCEEEESSCC-GGGHHHHH-HTTCSEE
T ss_pred -cCCChHHHHHHHHHhCCCEEEEEecccccc----cCCCchHHHHHHhhCC-CCCEEEECCcC-HHHHHHHH-HcCCCEE
Confidence 2234455556667789999944 3443221 121122 455555443 79999999998 78888888 7899999
Q ss_pred EeccccccCcc
Q psy7343 360 MTAEGNLYNPA 370 (487)
Q Consensus 360 miGRa~l~~P~ 370 (487)
.+||+++..++
T Consensus 184 vvGsaI~~~~d 194 (207)
T 3ajx_A 184 VAGGAIYGAAD 194 (207)
T ss_dssp EESHHHHTSSS
T ss_pred EEeeeccCCCC
Confidence 99999887554
No 209
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=97.64 E-value=0.00024 Score=73.95 Aligned_cols=150 Identities=13% Similarity=0.168 Sum_probs=105.1
Q ss_pred CCCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccC------cc---ccc--------cCChHHHHHHHH
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGH------YG---AYL--------QDDWPLLTNLVS 264 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr------~G---~~l--------~~d~~~i~eiv~ 264 (487)
..|+..-+.+.+++++.+.++. +++.|..+-+..|.|......|. +. ... ..+.+...++++
T Consensus 138 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~ 217 (424)
T 3v3w_A 138 RILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFA 217 (424)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHH
T ss_pred ceeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence 4455444556788888876664 45558888888876421000000 00 000 011355677888
Q ss_pred HHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCC
Q psy7343 265 SLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQ 342 (487)
Q Consensus 265 ~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~ 342 (487)
++|+++ ++++.+...-+++..+..++++.+++.|++.|-= + . ...+++..+++++.+++||++.+.+.
T Consensus 218 avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~ 287 (424)
T 3v3w_A 218 AVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMED--------A-V-PAENQESFKLIRQHTTTPLAVGEVFN 287 (424)
T ss_dssp HHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------C-S-CCSSTTHHHHHHHHCCSCEEECTTCC
T ss_pred HHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEC--------C-C-ChHhHHHHHHHHhhCCCCEEEccCcC
Confidence 899887 5788877666778888999999999999998842 1 1 22467889999999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEec
Q psy7343 343 CLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 343 s~~da~~~l~~~Gad~VmiG 362 (487)
+..++.++++...+|.|++-
T Consensus 288 ~~~~~~~~i~~ga~d~v~~k 307 (424)
T 3v3w_A 288 SIHDCRELIQNQWIDYIRTT 307 (424)
T ss_dssp SGGGTHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHcCCCCeEeec
Confidence 99999999976778988754
No 210
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.64 E-value=0.00023 Score=68.61 Aligned_cols=146 Identities=13% Similarity=0.124 Sum_probs=95.8
Q ss_pred CeeeeeccCCHHHHHHHHHhhCCc-Cc--EEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeec
Q psy7343 205 PLIIQFCGNDSKNLTEAAKLAEPH-CD--GIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRI 280 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~~~~~~-~d--~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~ 280 (487)
.+...|...|..++.+..+.++++ .| .+|+--|.=..+.. +| + ++++++|+.. ++|+.+.+
T Consensus 29 ~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit---~G------~----~~v~~lr~~~p~~~ldvHL-- 93 (246)
T 3inp_A 29 QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLT---FG------P----MVLKALRDYGITAGMDVHL-- 93 (246)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC---CC------H----HHHHHHHHHTCCSCEEEEE--
T ss_pred eeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchh---cC------H----HHHHHHHHhCCCCeEEEEE--
Confidence 466677766777777777777665 44 33443333001111 12 3 4555677777 78998887
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEccccC-------------------------------------------CCCCCCC
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTVD-------------------------------------------QRGMNTG 317 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~~-------------------------------------------~~g~~~g 317 (487)
-+.+..++.+.+.++|+|.|++|.-... -.+++.|
T Consensus 94 --mv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgG 171 (246)
T 3inp_A 94 --MVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGG 171 (246)
T ss_dssp --ECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--
T ss_pred --eeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCC
Confidence 4556677888889999999999873200 0122333
Q ss_pred C----CCHHHHHHHHhh-----CCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCc
Q psy7343 318 L----ASWEHITAVRKA-----LTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 318 ~----~~~~~i~~i~~~-----~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P 369 (487)
. ..++.++++++. .+++|.+.|||+ .+.+.++. +.|||.+.+|+++...+
T Consensus 172 Q~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~-~aGAD~~V~GSaIf~a~ 230 (246)
T 3inp_A 172 QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIA-VCGVNAFVAGSAIFNSD 230 (246)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHH-TTTCCEEEESHHHHTSS
T ss_pred cccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHH-HcCCCEEEEehHHhCCC
Confidence 2 234677777764 358999999998 68888888 89999999999877654
No 211
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=97.64 E-value=0.00017 Score=75.06 Aligned_cols=150 Identities=11% Similarity=0.074 Sum_probs=102.8
Q ss_pred CCCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccc---c--------------CChHHHHHHHH
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYL---Q--------------DDWPLLTNLVS 264 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l---~--------------~d~~~i~eiv~ 264 (487)
..|+-.-+.+.+++++.+.++. +++.|..+-+..|.|......|...... . .+.+...++++
T Consensus 139 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~ 218 (425)
T 3vcn_A 139 GVTVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFE 218 (425)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHH
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHH
Confidence 3455444456788888876664 4556888888887632100000000000 0 00233456777
Q ss_pred HHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCC
Q psy7343 265 SLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQ 342 (487)
Q Consensus 265 ~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~ 342 (487)
++|+++ ++++.+...-+++..+..++++.+++.|++.|-- + . .+.+++..+++++.+++||++.+.+.
T Consensus 219 avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~ 288 (425)
T 3vcn_A 219 RAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLED--------S-V-PAENQAGFRLIRQHTTTPLAVGEIFA 288 (425)
T ss_dssp HHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------C-S-CCSSTTHHHHHHHHCCSCEEECTTCC
T ss_pred HHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------C-C-ChhhHHHHHHHHhcCCCCEEeCCCcC
Confidence 888877 5778776655678888899999999999998852 1 1 22467889999999999999999999
Q ss_pred CHHHHHHHHHhcCCcEEEec
Q psy7343 343 CLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 343 s~~da~~~l~~~Gad~VmiG 362 (487)
+.+++.++++...+|.|++-
T Consensus 289 ~~~~~~~~i~~~a~d~v~~k 308 (425)
T 3vcn_A 289 HVWDAKQLIEEQLIDYLRAT 308 (425)
T ss_dssp SGGGTHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHcCCCCeEecC
Confidence 99999999976778988754
No 212
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=97.63 E-value=0.00015 Score=74.76 Aligned_cols=125 Identities=15% Similarity=0.162 Sum_probs=95.7
Q ss_pred cCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 212 GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 212 g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
|.+++++.+.++.+.+ .+..+.++.|+ +++.-.+.++++|+++ ++++.+...-+|+..+..
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~ 216 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWDLPRAR 216 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHH
Confidence 4346677766665444 47777776653 3455567788888886 578888776678888889
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCC-HHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLAS-WEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~-~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
++++.+++.|++.|- | + . .+.+ ++..+++++.+++||.+.+.+.+.+++.++++...+|.|++-
T Consensus 217 ~~~~~L~~~~i~~iE-------e-P-~-~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 217 QMAQRLGPAQLDWLE-------E-P-L-RADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp HHHHHHGGGCCSEEE-------C-C-S-CTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHhCCCEEE-------C-C-C-CccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999884 1 1 2 2346 899999999999999999999999999999976778887653
No 213
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.63 E-value=0.00042 Score=65.97 Aligned_cols=176 Identities=7% Similarity=0.053 Sum_probs=103.0
Q ss_pred HHHHhCCccceeccccch---hhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCccee
Q psy7343 167 LSRRYGSHLCYTPMVSAH---QFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVA 243 (487)
Q Consensus 167 i~~~~Ga~l~~t~~v~~~---~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~ 243 (487)
...+.|++...-....+. .+...+...+.+-+..+ +.|+-+.+.-.||+.+.+. +.+ +|.|-+|...
T Consensus 26 ~~~~~g~d~iHvDvmDg~fvpn~t~G~~~v~~lr~~~p-~~~~dvhLmv~dp~~~i~~---~~~-Ad~itvH~ea----- 95 (227)
T 1tqx_A 26 RMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTK-SIFFDVHLMVEYPEKYVPL---LKT-SNQLTFHFEA----- 95 (227)
T ss_dssp HHHHTTCSEEEEEEEBSSSSSCBCCCHHHHHHHGGGCS-SCEEEEEEESSCGGGGGGG---CTT-SSEEEEEGGG-----
T ss_pred HHHHcCCCEEEEEEEeCCcCcchhcCHHHHHHHHHhCC-CCcEEEEEEEcCHHHHHHH---HHh-CCEEEEeecC-----
Confidence 344567765322222222 22233444444433322 5789999988888765422 112 4444444332
Q ss_pred eccCccccccCChHHHHHHHH---HHhhhccCcEEEEeecccccccHHHHHHHHHHcC-CcEEEEEccccCCCCCCCCCC
Q psy7343 244 KRGHYGAYLQDDWPLLTNLVS---SLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAG-CQLLAVHGRTVDQRGMNTGLA 319 (487)
Q Consensus 244 ~~gr~G~~l~~d~~~i~eiv~---~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G-~d~I~VhgRt~~~~g~~~g~~ 319 (487)
. .+.+.+.++ .+++. +..+.+-+ +..+..+..+.+.+.| +|.|.+.+....-.|..-.+.
T Consensus 96 -----~------~~~~~~~i~~~~~i~~~-G~k~gval----np~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~ 159 (227)
T 1tqx_A 96 -----L------NEDTERCIQLAKEIRDN-NLWCGISI----KPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHD 159 (227)
T ss_dssp -----G------TTCHHHHHHHHHHHHTT-TCEEEEEE----CTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGG
T ss_pred -----C------ccCHHHHHHHHHHHHHc-CCeEEEEe----CCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchH
Confidence 1 112334555 66653 66566555 3334455556666666 999977433211111011334
Q ss_pred CHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 320 SWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 320 ~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
.++.++++++.. +++|.+.|||+ .+.+.++. +.|||.+.+|++++..++
T Consensus 160 ~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~-~aGAd~~V~GsaIf~~~d 209 (227)
T 1tqx_A 160 MMGKVSFLRKKYKNLNIQVDGGLN-IETTEISA-SHGANIIVAGTSIFNAED 209 (227)
T ss_dssp GHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHH-HHTCCEEEESHHHHTCSS
T ss_pred HHHHHHHHHHhccCCeEEEECCCC-HHHHHHHH-HcCCCEEEEeHHHhCCCC
Confidence 568888888877 88999999997 78899988 789999999999887554
No 214
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.62 E-value=0.00014 Score=70.60 Aligned_cols=136 Identities=16% Similarity=0.162 Sum_probs=89.1
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY 281 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~ 281 (487)
.+.||.+|-+-.|+.+..+ +.. ..+|+|-|... .+ + +.+.++++..++ .++.+.+
T Consensus 105 v~lPvl~kdfI~d~~qi~~-a~~--~GAD~VlL~~~-------------~l--~-~~l~~l~~~a~~-lGl~~lv----- 159 (254)
T 1vc4_A 105 VDLPLLRKDFVVDPFMLEE-ARA--FGASAALLIVA-------------LL--G-ELTGAYLEEARR-LGLEALV----- 159 (254)
T ss_dssp CCSCEEEESCCCSHHHHHH-HHH--TTCSEEEEEHH-------------HH--G-GGHHHHHHHHHH-HTCEEEE-----
T ss_pred cCCCEEECCcCCCHHHHHH-HHH--cCCCEEEECcc-------------ch--H-HHHHHHHHHHHH-CCCeEEE-----
Confidence 4678887766556654433 221 22454444311 11 1 455666654443 3544433
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-----CCcEEEcCCCCCHHHHHHHHHhcCC
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-----TIPVIANGNIQCLADVEACLAQTGV 356 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-----~iPVi~nGgI~s~~da~~~l~~~Ga 356 (487)
+..+..+. +...+.|+|.|-++.|.-.. -..+++.+.++.+.+ ++|+++.|||.|++|+.++. . |+
T Consensus 160 -ev~~~~E~-~~a~~~gad~IGvn~~~l~~-----~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~-~-Ga 230 (254)
T 1vc4_A 160 -EVHTEREL-EIALEAGAEVLGINNRDLAT-----LHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALE-G-LF 230 (254)
T ss_dssp -EECSHHHH-HHHHHHTCSEEEEESBCTTT-----CCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTT-T-TC
T ss_pred -EECCHHHH-HHHHHcCCCEEEEccccCcC-----CCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHH-c-CC
Confidence 33355554 46667899999997775322 235667777777665 79999999999999999999 6 99
Q ss_pred cEEEeccccccCccc
Q psy7343 357 AGVMTAEGNLYNPAL 371 (487)
Q Consensus 357 d~VmiGRa~l~~P~l 371 (487)
|+|.||++++..++.
T Consensus 231 ~gvlVGsAl~~~~d~ 245 (254)
T 1vc4_A 231 DAVLIGTSLMRAPDL 245 (254)
T ss_dssp SEEEECHHHHTSSCH
T ss_pred CEEEEeHHHcCCCCH
Confidence 999999999988765
No 215
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.61 E-value=0.00069 Score=65.40 Aligned_cols=138 Identities=10% Similarity=0.061 Sum_probs=97.6
Q ss_pred CCCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeec
Q psy7343 201 PEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRI 280 (487)
Q Consensus 201 ~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~ 280 (487)
..+.||..|=+.-++-+..+ ++ ....|+|=|++.+ -+.+.+.++++..++ .+..+.+-+
T Consensus 99 ~v~lPvLrKDfi~~~~qi~e-a~--~~GAD~ilLi~a~---------------l~~~~l~~l~~~a~~-lGl~~lvEv-- 157 (251)
T 1i4n_A 99 LTCRPILAKDFYIDTVQVKL-AS--SVGADAILIIARI---------------LTAEQIKEIYEAAEE-LGMDSLVEV-- 157 (251)
T ss_dssp TCCSCEEEECCCCSTHHHHH-HH--HTTCSEEEEEGGG---------------SCHHHHHHHHHHHHT-TTCEEEEEE--
T ss_pred hCCCCEEEeeCCCCHHHHHH-HH--HcCCCEEEEeccc---------------CCHHHHHHHHHHHHH-cCCeEEEEe--
Confidence 34789998866655554444 22 2235666555332 134667788877665 577777765
Q ss_pred ccccccHHHHHHHHHHc-CCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 281 YQDVNKTVEYARMLERA-GCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~-G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
.+..| ++...+. |++.|-|+.|.-.. ...+++...++.+.+ ++++|+-|||.|++|+.++. +. +|
T Consensus 158 ----~~~eE-~~~A~~l~g~~iIGinnr~l~t-----~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~-~~-a~ 225 (251)
T 1i4n_A 158 ----HSRED-LEKVFSVIRPKIIGINTRDLDT-----FEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLR-GK-VN 225 (251)
T ss_dssp ----CSHHH-HHHHHTTCCCSEEEEECBCTTT-----CCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHT-TT-CS
T ss_pred ----CCHHH-HHHHHhcCCCCEEEEeCccccc-----CCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHH-Hh-CC
Confidence 23444 5566677 99999998874322 245677888888777 68999999999999999999 67 99
Q ss_pred EEEeccccccCccc
Q psy7343 358 GVMTAEGNLYNPAL 371 (487)
Q Consensus 358 ~VmiGRa~l~~P~l 371 (487)
+|.||.+++..++.
T Consensus 226 avLVG~aimr~~d~ 239 (251)
T 1i4n_A 226 AVLVGTSIMKAENP 239 (251)
T ss_dssp EEEECHHHHHCSSH
T ss_pred EEEEcHHHcCCcCH
Confidence 99999999987665
No 216
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.61 E-value=0.00018 Score=67.64 Aligned_cols=152 Identities=11% Similarity=0.078 Sum_probs=82.5
Q ss_pred hhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhh
Q psy7343 190 KKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA 269 (487)
Q Consensus 190 ~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~ 269 (487)
.+..+++.+.. +.|+.+-+.-+|++++.+.+..+ ..|+|.+| +..+ ..+. ++++.+++.
T Consensus 50 ~~~i~~i~~~~--~~~~~v~l~v~d~~~~i~~~~~~--gad~v~vh----------~~~~----~~~~---~~~~~~~~~ 108 (220)
T 2fli_A 50 ADVVASMRKHS--KLVFDCHLMVVDPERYVEAFAQA--GADIMTIH----------TEST----RHIH---GALQKIKAA 108 (220)
T ss_dssp HHHHHHHHTTC--CSEEEEEEESSSGGGGHHHHHHH--TCSEEEEE----------GGGC----SCHH---HHHHHHHHT
T ss_pred HHHHHHHHHhC--CCCEEEEEeecCHHHHHHHHHHc--CCCEEEEc----------cCcc----ccHH---HHHHHHHHc
Confidence 44444443322 45777776667765544433322 24444444 3211 1232 344444443
Q ss_pred ccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-----CCcEEEcCCCCCH
Q psy7343 270 VQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-----TIPVIANGNIQCL 344 (487)
Q Consensus 270 ~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-----~iPVi~nGgI~s~ 344 (487)
+..+.+-+ +..+..+..+.+. .++|.|.+-+......+...+...++.++++++.. ++||++.|||+ +
T Consensus 109 -g~~i~~~~----~~~t~~e~~~~~~-~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~ 181 (220)
T 2fli_A 109 -GMKAGVVI----NPGTPATALEPLL-DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-N 181 (220)
T ss_dssp -TSEEEEEE----CTTSCGGGGGGGT-TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-T
T ss_pred -CCcEEEEE----cCCCCHHHHHHHH-hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-H
Confidence 55555554 2222223333332 45898866332211111011112235566666654 79999999999 7
Q ss_pred HHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 345 ADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 345 ~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
+++.+++ +.|+|+|.+||+++..++
T Consensus 182 ~~~~~~~-~~Gad~vvvGsai~~~~d 206 (220)
T 2fli_A 182 KTIRACY-EAGANVFVAGSYLFKASD 206 (220)
T ss_dssp TTHHHHH-HHTCCEEEESHHHHTSSC
T ss_pred HHHHHHH-HcCCCEEEEChHHhCCCC
Confidence 8898877 679999999999887654
No 217
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=97.60 E-value=0.00037 Score=70.97 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHH
Q psy7343 213 NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 213 ~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e 289 (487)
.+++++.+.++.+.+ .|+.|.++.| | ..+. ++++++++++ ++++.+...-+++.++ .+
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~-~-------------~~~~----e~v~avr~~~g~~~~l~vDan~~~~~~~-~~ 200 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIE-P-------------GWDV----EPVRAVRERFGDDVLLQVDANTAYTLGD-AP 200 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECB-T-------------TBSH----HHHHHHHHHHCTTSEEEEECTTCCCGGG-HH
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecC-c-------------hhHH----HHHHHHHHhcCCCceEEEeccCCCCHHH-HH
Confidence 478888777765544 4888888753 1 1233 4555666665 4666665544677788 99
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+++.++++|++.|- + + . ...+++..+++++.+++||++.+.+.+.++++++++...+|.|++
T Consensus 201 ~~~~l~~~~i~~iE-------~-P-~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 201 QLARLDPFGLLLIE-------Q-P-L-EEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp HHHTTGGGCCSEEE-------C-C-S-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHhcCCCeEe-------C-C-C-ChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 99999999999764 1 1 2 235789999999999999999999999999999997777999987
No 218
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.60 E-value=0.00067 Score=64.60 Aligned_cols=172 Identities=9% Similarity=0.098 Sum_probs=99.3
Q ss_pred HHHhCCccceeccccch---hhhcChhHHHHHHhcCCCCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceee
Q psy7343 168 SRRYGSHLCYTPMVSAH---QFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAK 244 (487)
Q Consensus 168 ~~~~Ga~l~~t~~v~~~---~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~ 244 (487)
..+.|++...-...-+. .+...++..+++-+....+.|+-+.+.-++++.+.+.+. ++ |+ ..++.
T Consensus 26 l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~i~~~~---~a--------Ga-d~itv 93 (228)
T 3ovp_A 26 MLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMA---VA--------GA-NQYTF 93 (228)
T ss_dssp HHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGGHHHHH---HH--------TC-SEEEE
T ss_pred HHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHHHHHHH---Hc--------CC-CEEEE
Confidence 34567765433222111 122344444444322224678999998888887665432 23 33 34445
Q ss_pred ccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCC----CCC
Q psy7343 245 RGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG----LAS 320 (487)
Q Consensus 245 ~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g----~~~ 320 (487)
|.... . .+.+.++.+++. ++.+.+-+....+.+.. +.+.+ .+|.|.+..... ++.| +..
T Consensus 94 H~Ea~----~---~~~~~i~~i~~~-G~k~gval~p~t~~e~l----~~~l~-~~D~Vl~msv~p----Gf~Gq~f~~~~ 156 (228)
T 3ovp_A 94 HLEAT----E---NPGALIKDIREN-GMKVGLAIKPGTSVEYL----APWAN-QIDMALVMTVEP----GFGGQKFMEDM 156 (228)
T ss_dssp EGGGC----S---CHHHHHHHHHHT-TCEEEEEECTTSCGGGT----GGGGG-GCSEEEEESSCT----TTCSCCCCGGG
T ss_pred ccCCc----h---hHHHHHHHHHHc-CCCEEEEEcCCCCHHHH----HHHhc-cCCeEEEeeecC----CCCCcccCHHH
Confidence 54321 1 234556666654 66566555333222222 22222 389888744421 1222 234
Q ss_pred HHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcc
Q psy7343 321 WEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 321 ~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
++.++++++.. ++++.+.|||+ .+.+.++. +.|||.+.+||++...++
T Consensus 157 l~ki~~lr~~~~~~~I~VdGGI~-~~t~~~~~-~aGAd~~VvGsaIf~a~d 205 (228)
T 3ovp_A 157 MPKVHWLRTQFPSLDIEVDGGVG-PDTVHKCA-EAGANMIVSGSAIMRSED 205 (228)
T ss_dssp HHHHHHHHHHCTTCEEEEESSCS-TTTHHHHH-HHTCCEEEESHHHHTCSC
T ss_pred HHHHHHHHHhcCCCCEEEeCCcC-HHHHHHHH-HcCCCEEEEeHHHhCCCC
Confidence 57788888876 68999999995 78999998 789999999999776543
No 219
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=97.58 E-value=0.00042 Score=70.61 Aligned_cols=195 Identities=14% Similarity=0.147 Sum_probs=91.4
Q ss_pred CCceEEecCCCCCCHH------HHHHHHHcCCCeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCcc
Q psy7343 78 SPRFILAPMVDASELP------WRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRF 151 (487)
Q Consensus 78 ~~~~~LAPMag~td~p------FR~l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~ 151 (487)
+.|+++|||+|.++.+ |++.|+++|..+...+|..+-.- ....+....... .+.+++..+ +.
T Consensus 86 ~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~--~~~~~~~v~r~~-P~~~~iani------g~--- 153 (365)
T 3sr7_A 86 DFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKN--PDDTSYQVKKSR-PHLLLATNI------GL--- 153 (365)
T ss_dssp SSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC--------------------------CCEEEEE------ET---
T ss_pred cCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccC--ccccceEehhhC-CCCcEEEEe------CC---
Confidence 6689999999999977 99999999999999998753211 000011011111 123333322 10
Q ss_pred ccccccCCCchHHHHHHHHhCCccceeccccchhhh-----cCh----hHHHHHHhcCCCCCCeeeeecc--CCHHHHHH
Q psy7343 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFI-----ADK----KLRQEILMSTPEDRPLIIQFCG--NDSKNLTE 220 (487)
Q Consensus 152 ~lApma~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll-----~~~----~~~~~~l~~~~~~~Pv~Vqi~g--~d~~~~~~ 220 (487)
+.+...++......|++....-.-....+. .+. +.++++.+ ..+.||++|..+ .+++
T Consensus 154 ------~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~--~~~~PVivK~vg~g~s~e---- 221 (365)
T 3sr7_A 154 ------DKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAK--KLQLPFILKEVGFGMDVK---- 221 (365)
T ss_dssp ------TSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHH--HCCSCEEEEECSSCCCHH----
T ss_pred ------CCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHH--hhCCCEEEEECCCCCCHH----
Confidence 111113455555667765432111111111 111 11222222 236899999543 4443
Q ss_pred HHHhhCCc-CcEEEeecC-CCcc----eeeccCccccccCCh-----HHHHHHHHHHhhhc-cCcEEEEeecccccccHH
Q psy7343 221 AAKLAEPH-CDGIDINIG-CPQM----VAKRGHYGAYLQDDW-----PLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 221 aa~~~~~~-~d~IdiN~G-cP~~----i~~~gr~G~~l~~d~-----~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~ 288 (487)
.|+.+.++ +|+|.+..+ -... ..+... .....+| +.+. .++... ++||++.+ ++.+..
T Consensus 222 ~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~--~~~~~~~g~pt~~~L~----~v~~~~~~ipvia~G----GI~~g~ 291 (365)
T 3sr7_A 222 TIQTAIDLGVKTVDISGRGGTSFAYIENRRGGN--RSYLNQWGQTTAQVLL----NAQPLMDKVEILASG----GIRHPL 291 (365)
T ss_dssp HHHHHHHHTCCEEECCCBC----------------CGGGTTCSCBHHHHHH----HHGGGTTTSEEEECS----SCCSHH
T ss_pred HHHHHHHcCCCEEEEeCCCCcccchhhcccccc--ccccccccccHHHHHH----HHHHhcCCCeEEEeC----CCCCHH
Confidence 34444454 788877421 1010 000000 0011232 2333 233222 68999997 788999
Q ss_pred HHHHHHHHcCCcEEEEEccc
Q psy7343 289 EYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt 308 (487)
|+++.+. .|||+|++ ||.
T Consensus 292 Dv~KaLa-lGAdaV~i-g~~ 309 (365)
T 3sr7_A 292 DIIKALV-LGAKAVGL-SRT 309 (365)
T ss_dssp HHHHHHH-HTCSEEEE-SHH
T ss_pred HHHHHHH-cCCCEEEE-CHH
Confidence 9999987 89999999 773
No 220
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=97.57 E-value=0.00076 Score=69.37 Aligned_cols=134 Identities=14% Similarity=0.167 Sum_probs=99.1
Q ss_pred CCeeeeecc---CCHHHHHHHHH-hhCC---cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcE
Q psy7343 204 RPLIIQFCG---NDSKNLTEAAK-LAEP---HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPV 274 (487)
Q Consensus 204 ~Pv~Vqi~g---~d~~~~~~aa~-~~~~---~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV 274 (487)
.|+-..+.+ .+++++.+.++ .+++ .+..+.+..|.+ +++.-.+.++++++++ ++++
T Consensus 158 v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l 222 (390)
T 3ugv_A 158 VKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDTAL 222 (390)
T ss_dssp EEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSEE
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEE
Confidence 444444444 56777766554 5666 677777766542 3455566777888876 5677
Q ss_pred EEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhc
Q psy7343 275 SCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQT 354 (487)
Q Consensus 275 ~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~ 354 (487)
.+...-+|+..+..++++.+++.|++.|- | + . ...+++..+++++.+++||.+.+.+.+..++.++++..
T Consensus 223 ~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 292 (390)
T 3ugv_A 223 MVDFNQGLDMAEAMHRTRQIDDLGLEWIE-------E-P-V-VYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAG 292 (390)
T ss_dssp EEECTTCCCHHHHHHHHHHHTTSCCSEEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHHhhCCCEEE-------C-C-C-CcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcC
Confidence 77766677888888999999999998884 2 1 1 23478999999999999999999999999999999767
Q ss_pred CCcEEEec
Q psy7343 355 GVAGVMTA 362 (487)
Q Consensus 355 Gad~VmiG 362 (487)
.+|.|++-
T Consensus 293 a~d~v~ik 300 (390)
T 3ugv_A 293 ACDLVMPD 300 (390)
T ss_dssp CCSEECCB
T ss_pred CCCEEEeC
Confidence 78888643
No 221
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=97.57 E-value=0.00017 Score=75.08 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=105.9
Q ss_pred CCCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcce-----eecc-Cccccc--cCChHHHHHHHHHHhhhc--c
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMV-----AKRG-HYGAYL--QDDWPLLTNLVSSLRQAV--Q 271 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i-----~~~g-r~G~~l--~~d~~~i~eiv~~v~~~~--~ 271 (487)
..|+...+.+.+++++.+.++. +++.|..|.+..|.+... ..++ ..|... ..+.+...++++++|+++ +
T Consensus 143 ~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d 222 (422)
T 3tji_A 143 AIPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWK 222 (422)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred eEEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCC
Confidence 3455444556788888776664 455689999988863110 0000 001111 011455677888899887 5
Q ss_pred CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHH
Q psy7343 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACL 351 (487)
Q Consensus 272 iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l 351 (487)
+++.+...-+++..+..++++.+++.|++.|-= + . .+.+++..+++++.+++||++.+.+.+.+++.+++
T Consensus 223 ~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll 292 (422)
T 3tji_A 223 LHILHDVHERLFPQQAVQLAKQLEPFQPYFIED--------I-L-PPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLI 292 (422)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------C-S-CGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhhCCCeEEC--------C-C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHH
Confidence 778877666778888999999999999998841 1 1 22367888999999999999999999999999999
Q ss_pred HhcCCcEEEecc
Q psy7343 352 AQTGVAGVMTAE 363 (487)
Q Consensus 352 ~~~Gad~VmiGR 363 (487)
+...+|.|++--
T Consensus 293 ~~ga~d~v~~k~ 304 (422)
T 3tji_A 293 VNRRIDFIRCHV 304 (422)
T ss_dssp HTTCCSEECCCG
T ss_pred hcCCCCEEecCc
Confidence 777789887643
No 222
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=97.56 E-value=0.00013 Score=75.39 Aligned_cols=121 Identities=13% Similarity=0.174 Sum_probs=79.4
Q ss_pred cchhhhcChhHHHHHHhc---C-------------------CCCCC-eeeeec-cCCHHHHHHHHHhhCCc-CcEEEeec
Q psy7343 182 SAHQFIADKKLRQEILMS---T-------------------PEDRP-LIIQFC-GNDSKNLTEAAKLAEPH-CDGIDINI 236 (487)
Q Consensus 182 ~~~~Ll~~~~~~~~~l~~---~-------------------~~~~P-v~Vqi~-g~d~~~~~~aa~~~~~~-~d~IdiN~ 236 (487)
.+..++++++.+.++++. . ....| |+|||. +.+.+++.++|+.++++ .|+|-+.-
T Consensus 225 ~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~N 304 (415)
T 3i65_A 225 PGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISN 304 (415)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 366778898888777641 1 13579 999999 45667889999998887 78886643
Q ss_pred CCCcceee---ccCccc-cccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 237 GCPQMVAK---RGHYGA-YLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 237 GcP~~i~~---~gr~G~-~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.-...... ....|+ .....+....+++..+++.+ ++||++.+ ++.+..++.+++. +|+|+|+| ||.
T Consensus 305 tt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~G----GI~s~eDa~e~l~-aGAd~VqI-gra 376 (415)
T 3i65_A 305 TTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASG----GIFSGLDALEKIE-AGASVCQL-YSC 376 (415)
T ss_dssp CBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECS----SCCSHHHHHHHHH-HTEEEEEE-SHH
T ss_pred CCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEEC----CCCCHHHHHHHHH-cCCCEEEE-cHH
Confidence 22111000 001111 12345666778888888888 79999997 8889999999887 89999999 875
No 223
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=97.56 E-value=0.00066 Score=69.32 Aligned_cols=123 Identities=11% Similarity=0.114 Sum_probs=94.4
Q ss_pred CHHHHHHHHH-hhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHH
Q psy7343 214 DSKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 214 d~~~~~~aa~-~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e 289 (487)
+++++.+.++ .+++ .+..+.+..|++ +++.-.+.++++++.+ ++++.+...-+++..+..+
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~ 215 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQR 215 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHH
Confidence 7777766554 5566 688888877653 3445567788888887 5677777666777778888
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+++.+++.|++.|- | + . ...+++..+++++.+++||.+.+.+.+.+++.++++...+|.|++
T Consensus 216 ~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 277 (372)
T 3tj4_A 216 FCAAAKDLDIYWFE-------E-P-L-WYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQP 277 (372)
T ss_dssp HHHHTTTSCEEEEE-------S-C-S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHHHhhcCCCEEE-------C-C-C-CchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEe
Confidence 99999998887773 2 1 2 234789999999999999999999999999999997777888765
No 224
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=97.55 E-value=0.00038 Score=71.65 Aligned_cols=137 Identities=6% Similarity=0.109 Sum_probs=101.5
Q ss_pred CCeeeeec----cCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEE-
Q psy7343 204 RPLIIQFC----GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVS- 275 (487)
Q Consensus 204 ~Pv~Vqi~----g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~- 275 (487)
.|+...+. ..+++.+.+.++.+ ++.+..+.++.|+ +++.-.+.++++++++ ++++.
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~g~~~~l~~ 191 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK----------------NLDADEEFLSRVKEEFGSRVRIKS 191 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHGGGCEEEE
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHcCCCCcEEE
Confidence 45555555 55678877766644 4558888887765 2444566777788876 56777
Q ss_pred EEeecccccccHHHHHHHHHHcCC--cEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHh
Q psy7343 276 CKIRIYQDVNKTVEYARMLERAGC--QLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQ 353 (487)
Q Consensus 276 vKiR~~~d~~~~~e~a~~le~~G~--d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~ 353 (487)
+...-+++..+..++++.++++|+ +.|. | + . ...+++..+++++.+++|| .+.+.+.+++.++++.
T Consensus 192 vDan~~~~~~~A~~~~~~l~~~~i~~~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPI--dE~~~~~~~~~~~~~~ 259 (391)
T 3gd6_A 192 YDFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------S-P-A-PRNDFDGLYQLRLKTDYPI--SEHVWSFKQQQEMIKK 259 (391)
T ss_dssp EECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------C-C-S-CTTCHHHHHHHHHHCSSCE--EEECCCHHHHHHHHHH
T ss_pred ecCCCCcCHHHHHHHHHHHHhcCCCcceec-------C-C-C-ChhhHHHHHHHHHHcCCCc--CCCCCCHHHHHHHHHc
Confidence 766556788888999999999999 7764 1 1 2 2347899999999999999 7899999999999977
Q ss_pred cCCcEEEeccccccC
Q psy7343 354 TGVAGVMTAEGNLYN 368 (487)
Q Consensus 354 ~Gad~VmiGRa~l~~ 368 (487)
..+|.|++--+.++.
T Consensus 260 ~~~d~v~~k~~~~GG 274 (391)
T 3gd6_A 260 DAIDIFNISPVFIGG 274 (391)
T ss_dssp TCCSEEEECHHHHTS
T ss_pred CCCCEEEECchhcCC
Confidence 789999986554443
No 225
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=97.55 E-value=0.001 Score=68.28 Aligned_cols=133 Identities=14% Similarity=0.105 Sum_probs=98.8
Q ss_pred CCeeeeeccCCHHHHHHHHH-hhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 204 RPLIIQFCGNDSKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~-~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
.|+...+...+++++.+.++ .+++ .+..+.+..|.+ +++.-.+.++++++++ ++++.+...
T Consensus 157 v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vDaN 221 (383)
T 3toy_A 157 IPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLDFN 221 (383)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred eEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 45544443457888776554 5566 577777665541 3555566777888876 567777766
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+|+..+..++++.+++.|++.|- | + . ...+++..+++++.+++||.+.+.+.+..++.++++...+|.|
T Consensus 222 ~~~~~~~A~~~~~~l~~~~i~~iE-------e-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v 291 (383)
T 3toy_A 222 QSLDPAEATRRIARLADYDLTWIE-------E-P-V-PQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFI 291 (383)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHHhhCCCEEE-------C-C-C-CcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 677888889999999999998874 2 1 1 2347899999999999999999999999999999977778888
Q ss_pred Ee
Q psy7343 360 MT 361 (487)
Q Consensus 360 mi 361 (487)
++
T Consensus 292 ~i 293 (383)
T 3toy_A 292 MP 293 (383)
T ss_dssp CC
T ss_pred Ee
Confidence 64
No 226
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=97.53 E-value=0.0012 Score=67.69 Aligned_cols=134 Identities=13% Similarity=0.125 Sum_probs=98.9
Q ss_pred CCeeeeeccCCHHHHHHHHH-hhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecc
Q psy7343 204 RPLIIQFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIY 281 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~ 281 (487)
.|+...+...+++...+.++ .+++.+..+.+..|. .+++.-.+.++++++.+ ++++.+...-+
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avR~a~~~~~l~vDan~~ 202 (385)
T 3i6e_A 138 IPLSCSIANPDFDADIALMERLRADGVGLIKLKTGF---------------RDHAFDIMRLELIARDFPEFRVRVDYNQG 202 (385)
T ss_dssp EEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSS---------------SCHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 45555555456766655444 444457777666554 13444456677777776 56777776667
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
|+..+..++++.+++.|++.|- | + . .+.+++..+++++.+++||.+...+.+..++.++++...+|.|++
T Consensus 203 ~~~~~A~~~~~~L~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~ 272 (385)
T 3i6e_A 203 LEIDEAVPRVLDVAQFQPDFIE-------Q-P-V-RAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSI 272 (385)
T ss_dssp CCGGGHHHHHHHHHTTCCSCEE-------C-C-S-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEE-------C-C-C-CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 8888999999999999998874 2 1 2 234789999999999999999999999999999997778999986
Q ss_pred c
Q psy7343 362 A 362 (487)
Q Consensus 362 G 362 (487)
-
T Consensus 273 k 273 (385)
T 3i6e_A 273 K 273 (385)
T ss_dssp C
T ss_pred c
Confidence 4
No 227
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=97.53 E-value=0.00066 Score=69.18 Aligned_cols=132 Identities=13% Similarity=0.097 Sum_probs=97.3
Q ss_pred CCeeeeeccCCHHHHHHHHH-hhCC-cCcEEEeecCCCcceeeccCccccccCChH-HHHHHHHHHhhhc--cCcEEEEe
Q psy7343 204 RPLIIQFCGNDSKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWP-LLTNLVSSLRQAV--QVPVSCKI 278 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~-~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~-~i~eiv~~v~~~~--~iPV~vKi 278 (487)
.|+...+...+++.+.+.++ .+++ .+..+.+..|. ++. .-.+.++++++.+ ++++.+..
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~----------------~~~~~d~~~v~avR~a~g~~~~l~vDa 192 (367)
T 3dg3_A 129 MRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGR----------------RPVQLDTAVVRALRERFGDAIELYVDG 192 (367)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCC----------------SSTHHHHHHHHHHHHHHGGGSEEEEEC
T ss_pred EEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCC----------------ChhhhHHHHHHHHHHHhCCCCEEEEEC
Confidence 45555555567888776555 4555 57777776554 111 2345667777776 56777766
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
.-+|+..+..++++.+++.|++.|- | + . ...+++..+++++.+++||++.+.+.+.+++.++++...+|.
T Consensus 193 n~~~~~~~a~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 262 (367)
T 3dg3_A 193 NRGWSAAESLRAMREMADLDLLFAE-------E-L-C-PADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATA 262 (367)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSCEE-------S-C-S-CTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEE-------C-C-C-CcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCE
Confidence 5577878888999999999988874 1 1 1 234788899999999999999999999999999997777999
Q ss_pred EEe
Q psy7343 359 VMT 361 (487)
Q Consensus 359 Vmi 361 (487)
|++
T Consensus 263 v~~ 265 (367)
T 3dg3_A 263 ISI 265 (367)
T ss_dssp EEE
T ss_pred EEe
Confidence 886
No 228
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.49 E-value=0.003 Score=62.61 Aligned_cols=147 Identities=16% Similarity=0.149 Sum_probs=98.9
Q ss_pred CCCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEee
Q psy7343 203 DRPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIR 279 (487)
Q Consensus 203 ~~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR 279 (487)
+.||++-+- | .++++..+.++.++++ +++|.|--+...+ +.|..++.-+.+.+...+-+++++++ ++++.++.|
T Consensus 89 ~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k--rcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~AR 165 (305)
T 3ih1_A 89 DLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPK--KCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVAR 165 (305)
T ss_dssp CCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSC--CTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCc--ccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEe
Confidence 579988865 3 3677888888877666 8888887664212 22222222234566666666667766 778888877
Q ss_pred ccc----ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEc---CCCCCHHHHHHHHH
Q psy7343 280 IYQ----DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIAN---GNIQCLADVEACLA 352 (487)
Q Consensus 280 ~~~----d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~n---GgI~s~~da~~~l~ 352 (487)
... +.++..+-++.++++|+|.|.+++. .+.+.++++.+.+++|+++| ||-.-.-...++-
T Consensus 166 tda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~-----------~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~- 233 (305)
T 3ih1_A 166 TDARGVEGLDEAIERANAYVKAGADAIFPEAL-----------QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFA- 233 (305)
T ss_dssp ECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC-----------CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHH-
T ss_pred eccccccCHHHHHHHHHHHHHcCCCEEEEcCC-----------CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHH-
Confidence 642 2457778888899999999999543 35678999999999999876 3321111234443
Q ss_pred hcCCcEEEeccc
Q psy7343 353 QTGVAGVMTAEG 364 (487)
Q Consensus 353 ~~Gad~VmiGRa 364 (487)
+.|+..|..|-.
T Consensus 234 ~lGv~~v~~~~~ 245 (305)
T 3ih1_A 234 NMGFQMVIYPVT 245 (305)
T ss_dssp HTTCSEEEECSH
T ss_pred HcCCCEEEEchH
Confidence 689999998854
No 229
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.49 E-value=7.6e-05 Score=71.66 Aligned_cols=54 Identities=9% Similarity=0.107 Sum_probs=49.8
Q ss_pred CCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcc-cccC
Q psy7343 319 ASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA-LFTG 374 (487)
Q Consensus 319 ~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~-lf~~ 374 (487)
.+.+.++++++.+ ++|+++.|||+|++++++++ + |||+|.+|+++..+|. ++++
T Consensus 168 ~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~-~-gAd~VIVGSa~v~~~~~~~~~ 223 (240)
T 1viz_A 168 GDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-E-HADVIVVGNAVYEDFDRALKT 223 (240)
T ss_dssp CCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHH-T-TCSEEEECTHHHHCHHHHHTH
T ss_pred ChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHH-h-CCCEEEEChHHHhCHHHHHHH
Confidence 4789999999999 99999999999999999998 5 9999999999999998 7653
No 230
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=97.47 E-value=0.0014 Score=67.03 Aligned_cols=134 Identities=11% Similarity=0.167 Sum_probs=98.2
Q ss_pred CCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeec
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRI 280 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~ 280 (487)
.|+...+...+++++.+.++. +++.+..+.+..|. +++.-.+.++++++++ ++++.+...-
T Consensus 132 v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDaN~ 195 (379)
T 3r0u_A 132 IVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDANQ 195 (379)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEECTT
T ss_pred EEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeCCC
Confidence 455555555678877766554 44456666665542 3555567788888887 4677776655
Q ss_pred ccccccHHHHHHHHHH--cCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 281 YQDVNKTVEYARMLER--AGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~--~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
+|+..+..++++.+++ .|+..|- | + . ...+++..+++++.+++||.++..+.+..|+.++++...+|.
T Consensus 196 ~w~~~~A~~~~~~l~~~~~~l~~iE-------e-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~ 265 (379)
T 3r0u_A 196 GWNLAQTKQFIEEINKYSLNVEIIE-------Q-P-V-KYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNM 265 (379)
T ss_dssp CCCHHHHHHHHHHHHTSCCCEEEEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSE
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEE-------C-C-C-CcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCE
Confidence 7788888999999999 6666653 2 1 1 234789999999999999999999999999999997667899
Q ss_pred EEecc
Q psy7343 359 VMTAE 363 (487)
Q Consensus 359 VmiGR 363 (487)
|++--
T Consensus 266 v~~k~ 270 (379)
T 3r0u_A 266 INIKL 270 (379)
T ss_dssp EEECH
T ss_pred EEECc
Confidence 88643
No 231
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=97.46 E-value=0.0011 Score=68.19 Aligned_cols=138 Identities=16% Similarity=0.186 Sum_probs=103.0
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEe
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKI 278 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKi 278 (487)
...|+...+...+++++.+.++.+ ++.+..+.+..|++.. ..+++.-.+.++++++++ ++++.+..
T Consensus 133 ~~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vDa 201 (386)
T 3fv9_G 133 GPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLADA 201 (386)
T ss_dssp SCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred CceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 346777667777888888766654 5558999999887521 124566677888899887 46777766
Q ss_pred ecccccccHHHHHHHH-HHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 279 RIYQDVNKTVEYARML-ERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 279 R~~~d~~~~~e~a~~l-e~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
.-+|+..+..++++.+ ++.++ .| +| + . ++++..+++++.+++||.+...+.+..++.++++...+|
T Consensus 202 N~~~~~~~A~~~~~~l~~~~~i-~i-------Ee-P-~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d 268 (386)
T 3fv9_G 202 NNGLTVEHALRMLSLLPPGLDI-VL-------EA-P-C---ASWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCD 268 (386)
T ss_dssp TTCCCHHHHHHHHHHSCSSCCC-EE-------EC-C-C---SSHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCHHHHHHHHHHhhccCCc-EE-------ec-C-C---CCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCC
Confidence 5567777777888888 66665 44 22 1 2 278999999999999999999999999999999777899
Q ss_pred EEEecc
Q psy7343 358 GVMTAE 363 (487)
Q Consensus 358 ~VmiGR 363 (487)
.|++--
T Consensus 269 ~v~~k~ 274 (386)
T 3fv9_G 269 GVGLKV 274 (386)
T ss_dssp EEEEEH
T ss_pred EEEECc
Confidence 998643
No 232
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.45 E-value=0.0018 Score=61.38 Aligned_cols=134 Identities=16% Similarity=0.153 Sum_probs=85.9
Q ss_pred HHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc---CcEEEEeecccccccHHHHHHH
Q psy7343 217 NLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ---VPVSCKIRIYQDVNKTVEYARM 293 (487)
Q Consensus 217 ~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~---iPV~vKiR~~~d~~~~~e~a~~ 293 (487)
...++.. ++...|.||+-+.. |.....+|+.+.+-+.++++.++ ++|++-.-.. +.++....++.
T Consensus 69 k~~E~~~-i~~GAdEID~Vini----------g~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L-t~eei~~a~~i 136 (226)
T 1vcv_A 69 RIALVSR-LAEVADEIDVVAPI----------GLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL-RDEERYTLYDI 136 (226)
T ss_dssp HHHHHHH-HTTTCSEEEEECCH----------HHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC-CHHHHHHHHHH
T ss_pred HHHHHHH-HHCCCCEEEEecch----------hhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC-CHHHHHHHHHH
Confidence 4456666 77778999864322 22223478888888888888763 3333322111 33457778888
Q ss_pred HHHcCCcEEEEEc-ccc---CCCCCCCCCCCHHHHHHHHhh---CC--CcEEEcCCCCCHHHHHHHHHhc---CCc----
Q psy7343 294 LERAGCQLLAVHG-RTV---DQRGMNTGLASWEHITAVRKA---LT--IPVIANGNIQCLADVEACLAQT---GVA---- 357 (487)
Q Consensus 294 le~~G~d~I~Vhg-Rt~---~~~g~~~g~~~~~~i~~i~~~---~~--iPVi~nGgI~s~~da~~~l~~~---Gad---- 357 (487)
..++|+|.|--+- -+. ....+..+.+..+.++.+++. ++ ++|-++|||+|.+|+.+++ +. |++
T Consensus 137 a~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i-~a~~~Ga~~~~f 215 (226)
T 1vcv_A 137 IAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIV-DAIGWGEDPARV 215 (226)
T ss_dssp HHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHH-HHHCSCSCTTTE
T ss_pred HHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-HHHHCCCCcCCc
Confidence 8999999997621 110 000001356777666666665 54 9999999999999999999 56 887
Q ss_pred EEEecc
Q psy7343 358 GVMTAE 363 (487)
Q Consensus 358 ~VmiGR 363 (487)
.+...+
T Consensus 216 RiGtS~ 221 (226)
T 1vcv_A 216 RLGTST 221 (226)
T ss_dssp EEEESC
T ss_pred eEecCc
Confidence 554443
No 233
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.45 E-value=0.00063 Score=62.85 Aligned_cols=86 Identities=19% Similarity=0.310 Sum_probs=67.4
Q ss_pred cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHH
Q psy7343 271 QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 271 ~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~ 350 (487)
++..+-.+=+ -|........+.++++..|.+-+ +.|.. -+.++++++.+++|||+.|.|+|.+|+.++
T Consensus 101 gL~tIqR~Fl-iDS~al~~~~~~i~~~~PD~iEi----------LPGi~-p~iI~~i~~~~~~PiIaGGlI~~~edv~~a 168 (192)
T 3kts_A 101 KMLAIQRLFM-IDSSAYNKGVALIQKVQPDCIEL----------LPGII-PEQVQKMTQKLHIPVIAGGLIETSEQVNQV 168 (192)
T ss_dssp TCEEEEEEEC-CSHHHHHHHHHHHHHHCCSEEEE----------ECTTC-HHHHHHHHHHHCCCEEEESSCCSHHHHHHH
T ss_pred CCeEEEEEEE-EEcchHHHHHHHHhhcCCCEEEE----------CCchh-HHHHHHHHHhcCCCEEEECCcCCHHHHHHH
Confidence 5544444311 24445677788888999999987 33432 478999999999999999999999999999
Q ss_pred HHhcCCcEEEeccccccCc
Q psy7343 351 LAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 351 l~~~Gad~VmiGRa~l~~P 369 (487)
+ +.||++|..++..+++-
T Consensus 169 l-~aGA~aVsTs~~~LW~~ 186 (192)
T 3kts_A 169 I-ASGAIAVTTSNKHLWEG 186 (192)
T ss_dssp H-TTTEEEEEECCGGGGTT
T ss_pred H-HcCCeEEEeCCHHHhCc
Confidence 9 89999999998877763
No 234
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.38 E-value=0.00011 Score=70.13 Aligned_cols=69 Identities=10% Similarity=0.059 Sum_probs=56.9
Q ss_pred cCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccccCC
Q psy7343 297 AGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQ 375 (487)
Q Consensus 297 ~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~~ 375 (487)
.|...|-+-. . | ..| +.+.++++++.+ ++|+++.|||+|+++++++. + |||+|.+|+++..||..+.+.
T Consensus 158 ~g~~~vY~e~-s----G-~~g--~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~-~-gAD~VVVGSai~~~~~~~~e~ 227 (235)
T 3w01_A 158 YRLPVMYIEY-S----G-IYG--DVSKVQAVSEHLTETQLFYGGGISSEQQATEMA-A-IADTIIVGDIIYKDIKKALKT 227 (235)
T ss_dssp TCCSEEEEEC-T----T-SCC--CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHH-T-TSSEEEECTHHHHCHHHHHHT
T ss_pred cCCCEEEEec-C----C-CcC--CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHH-c-CCCEEEECCceecCHHHHHHH
Confidence 4677776633 1 1 122 689999999999 99999999999999999988 5 999999999999999887654
No 235
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.38 E-value=0.00057 Score=64.91 Aligned_cols=92 Identities=13% Similarity=0.216 Sum_probs=64.4
Q ss_pred HHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCC
Q psy7343 262 LVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGN 340 (487)
Q Consensus 262 iv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGg 340 (487)
+++..++ .+++++.- ..+..++ ..+.+.|+|.|.++.- .. .. -.+.++.+++.+ ++|+++.||
T Consensus 102 v~~~ar~-~g~~~i~G------v~t~~e~-~~A~~~Gad~vk~Fpa--~~---~g---G~~~lk~l~~~~~~ipvvaiGG 165 (224)
T 1vhc_A 102 IVKLCQD-LNFPITPG------VNNPMAI-EIALEMGISAVKFFPA--EA---SG---GVKMIKALLGPYAQLQIMPTGG 165 (224)
T ss_dssp HHHHHHH-TTCCEECE------ECSHHHH-HHHHHTTCCEEEETTT--TT---TT---HHHHHHHHHTTTTTCEEEEBSS
T ss_pred HHHHHHH-hCCCEEec------cCCHHHH-HHHHHCCCCEEEEeeC--cc---cc---CHHHHHHHHhhCCCCeEEEECC
Confidence 3444444 56776653 2344444 5566899999999541 00 11 267899999988 899999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 341 IQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 341 I~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
|+ .+++.++++..|+++|. |+++...+.+
T Consensus 166 I~-~~N~~~~l~agga~~v~-gS~i~~~~~i 194 (224)
T 1vhc_A 166 IG-LHNIRDYLAIPNIVACG-GSWFVEKKLI 194 (224)
T ss_dssp CC-TTTHHHHHTSTTBCCEE-ECGGGCHHHH
T ss_pred cC-HHHHHHHHhcCCCEEEE-EchhcCcchh
Confidence 95 58899999434999999 9888776655
No 236
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.37 E-value=0.00023 Score=67.99 Aligned_cols=73 Identities=14% Similarity=0.105 Sum_probs=57.8
Q ss_pred HHHHHHHHcCC-----cEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 289 EYARMLERAGC-----QLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 289 e~a~~le~~G~-----d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
+.++.+.+.|. ..|-+-+ +. -..+.+.++++++.+ ++|+++.|||+|++++++++ + |||+|.+|
T Consensus 149 e~~~~~a~~g~~~l~~~~Vyl~~-~G-------~~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~-~-gAd~VIVG 218 (234)
T 2f6u_A 149 ELAASYALVGEKLFNLPIIYIEY-SG-------TYGNPELVAEVKKVLDKARLFYGGGIDSREKAREML-R-YADTIIVG 218 (234)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEC-TT-------SCCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHH-H-HSSEEEEC
T ss_pred HHHHHHHHhhhhhcCCCEEEEeC-CC-------CcchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHH-h-CCCEEEEC
Confidence 55555555554 6665534 21 134789999999999 99999999999999999998 5 99999999
Q ss_pred cccccCccc
Q psy7343 363 EGNLYNPAL 371 (487)
Q Consensus 363 Ra~l~~P~l 371 (487)
+++..+|.-
T Consensus 219 Sa~v~~~~~ 227 (234)
T 2f6u_A 219 NVIYEKGID 227 (234)
T ss_dssp HHHHHHCHH
T ss_pred hHHHhCHHH
Confidence 999988754
No 237
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=97.34 E-value=0.00099 Score=67.99 Aligned_cols=120 Identities=13% Similarity=0.152 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHH
Q psy7343 213 NDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 213 ~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~ 290 (487)
.+++++.+.++.+ ++.|+.+.++.| | ..+.+ .++++++++ ++++.+...-+|+.++ .++
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~iKik~~-~-------------~~d~~----~v~avr~a~~~~~l~vDan~~~~~~~-~~~ 207 (375)
T 1r0m_A 147 ADEQATVDLVRRHVEQGYRRIKLKIK-P-------------GWDVQ----PVRATREAFPDIRLTVDANSAYTLAD-AGR 207 (375)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB-T-------------TBSHH----HHHHHHHHCTTSCEEEECTTCCCGGG-HHH
T ss_pred CCHHHHHHHHHHHHHhcccEEEEecC-h-------------HHHHH----HHHHHHHHcCCCeEEEeCCCCCCHHH-HHH
Confidence 3788887766544 445787777643 1 12333 345566554 5677776655678888 999
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++++|++.|- | + . .+.+++..+++++.+++||.+.+.+.+.+++.++++...+|.|++
T Consensus 208 ~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 268 (375)
T 1r0m_A 208 LRQLDEYDLTYIE-------Q-P-L-AWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINL 268 (375)
T ss_dssp HHTTGGGCCSCEE-------C-C-S-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEE
T ss_pred HHHHHhCCCcEEE-------C-C-C-CcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEE
Confidence 9999999999884 2 1 2 235788999999999999999999999999999997777999987
No 238
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=97.31 E-value=0.0012 Score=68.96 Aligned_cols=151 Identities=13% Similarity=0.125 Sum_probs=104.5
Q ss_pred CCCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcce-----------eeccC------------ccccc--cCCh
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMV-----------AKRGH------------YGAYL--QDDW 256 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i-----------~~~gr------------~G~~l--~~d~ 256 (487)
..|+...+.+.+++++.+.++. +++.|..+-+..|..... ...++ -|... ..+.
T Consensus 144 ~v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (440)
T 3t6c_A 144 GIALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYA 223 (440)
T ss_dssp SEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHH
T ss_pred eeEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhH
Confidence 3455444556788888776654 455688888887742100 00000 00000 0013
Q ss_pred HHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCc
Q psy7343 257 PLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIP 334 (487)
Q Consensus 257 ~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iP 334 (487)
+...+.++++|+++ ++++.+...-+++..+..++++.+++.|++.|- | + . .+.+++..+++++.+++|
T Consensus 224 ~~d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------e-P-~-~~~d~~~~~~l~~~~~iP 293 (440)
T 3t6c_A 224 KSIPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLE-------D-P-V-APENTEWLKMLRQQSSTP 293 (440)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------C-S-S-CGGGGGGHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE-------C-C-C-ChhhHHHHHHHHhhcCCC
Confidence 45677788899887 578888776678888889999999999999884 1 1 1 223678889999999999
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 335 VIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 335 Vi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
|.+.+.+.+..++.++++...+|.|++--
T Consensus 294 Ia~dE~~~~~~~~~~~i~~~a~d~v~~k~ 322 (440)
T 3t6c_A 294 IAMGELFVNVNEWKPLIDNKLIDYIRCHI 322 (440)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred EEeCcccCCHHHHHHHHHcCCccceeech
Confidence 99999999999999999777789887643
No 239
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=97.31 E-value=0.00093 Score=69.15 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=97.3
Q ss_pred CCHHHHHHHHHhh-CCcCcEEEeecCCCcceee---c-cCccc----cccCC---hHHHHHHHHHHhhhc--cCcEEEEe
Q psy7343 213 NDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAK---R-GHYGA----YLQDD---WPLLTNLVSSLRQAV--QVPVSCKI 278 (487)
Q Consensus 213 ~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~---~-gr~G~----~l~~d---~~~i~eiv~~v~~~~--~iPV~vKi 278 (487)
.+++++.+.++.+ ++.|..+-+..+.+..-.. . |. +. ....+ .+...++++++|+++ ++++.+..
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~-~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDa 220 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGF-AVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDL 220 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGG-TBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCC-CccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 3678887776654 4458888776532110000 0 11 10 00011 345567888898887 57788776
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
.-+++.++..++++.+++.|++.|.. + ..+++..+++++.+++||++.+.+.+.+++.++++...+|.
T Consensus 221 N~~~~~~~A~~~~~~L~~~~i~~iE~--------P----~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 288 (409)
T 3go2_A 221 NFNAKPEGYLKILRELADFDLFWVEI--------D----SYSPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDV 288 (409)
T ss_dssp TTCSCHHHHHHHHHHTTTSCCSEEEC--------C----CSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSE
T ss_pred CCCCCHHHHHHHHHHHhhcCCeEEEe--------C----cCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCE
Confidence 55777788899999999999999874 1 13788999999999999999999999999999997777899
Q ss_pred EEec
Q psy7343 359 VMTA 362 (487)
Q Consensus 359 VmiG 362 (487)
|++=
T Consensus 289 v~~k 292 (409)
T 3go2_A 289 AIVD 292 (409)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8864
No 240
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=97.30 E-value=0.0014 Score=68.11 Aligned_cols=95 Identities=9% Similarity=0.110 Sum_probs=62.7
Q ss_pred CCCCCeeeeec---------cCCHHHHHHHHHhhCC-c-CcEEEeecCCCcce-eeccCccccccCChHHHHHHHHHHhh
Q psy7343 201 PEDRPLIIQFC---------GNDSKNLTEAAKLAEP-H-CDGIDINIGCPQMV-AKRGHYGAYLQDDWPLLTNLVSSLRQ 268 (487)
Q Consensus 201 ~~~~Pv~Vqi~---------g~d~~~~~~aa~~~~~-~-~d~IdiN~GcP~~i-~~~gr~G~~l~~d~~~i~eiv~~v~~ 268 (487)
+.+.||+++|. |.+.+++.++++.+++ . .|.|++..|.-... ......+.. .+++.+ +.+++
T Consensus 240 ~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~--~~~~~a----~~Ik~ 313 (419)
T 3l5a_A 240 PDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDH--FGRPVN----QIVYE 313 (419)
T ss_dssp CTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTT--TTSBHH----HHHHH
T ss_pred CCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCcc--ccHHHH----HHHHH
Confidence 45779999986 3367888999998887 6 89999987641100 000001111 133443 34555
Q ss_pred hc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 269 AV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 269 ~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.+ ++||++++ ++.+..++.+.+++ +|.|++ ||.
T Consensus 314 ~v~~~iPVI~~G----gI~t~e~Ae~~L~~--aDlVai-GR~ 348 (419)
T 3l5a_A 314 HLAGRIPLIASG----GINSPESALDALQH--ADMVGM-SSP 348 (419)
T ss_dssp HHTTSSCEEECS----SCCSHHHHHHHGGG--CSEEEE-STH
T ss_pred HcCCCCeEEEEC----CCCCHHHHHHHHHh--CCcHHH-HHH
Confidence 55 58999998 55577777777776 999999 885
No 241
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.28 E-value=0.00019 Score=77.29 Aligned_cols=82 Identities=16% Similarity=0.204 Sum_probs=63.8
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCH-----------HHHHHHHHhc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCL-----------ADVEACLAQT 354 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~-----------~da~~~l~~~ 354 (487)
+..++++.+++.|+|++++-.-+....+......+.+.++++++.+++||++.|||++. +++.+++ +.
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l-~a 359 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYF-RS 359 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHH-Hc
Confidence 78899999999999999874332211111112235788999999999999999999998 5599999 78
Q ss_pred CCcEEEeccccccC
Q psy7343 355 GVAGVMTAEGNLYN 368 (487)
Q Consensus 355 Gad~VmiGRa~l~~ 368 (487)
|||.|.||++++.|
T Consensus 360 Gad~V~igt~~~~~ 373 (555)
T 1jvn_A 360 GADKVSIGTDAVYA 373 (555)
T ss_dssp TCSEEEECHHHHHH
T ss_pred CCCEEEECCHHhhC
Confidence 99999999999875
No 242
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=97.28 E-value=0.00055 Score=71.27 Aligned_cols=149 Identities=11% Similarity=0.133 Sum_probs=100.2
Q ss_pred CCCeeeeeccCCHHHHHHHH-HhhCCcCcEEEeecCCCcceeeccC---cc--------cccc--------CChHHHHHH
Q psy7343 203 DRPLIIQFCGNDSKNLTEAA-KLAEPHCDGIDINIGCPQMVAKRGH---YG--------AYLQ--------DDWPLLTNL 262 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa-~~~~~~~d~IdiN~GcP~~i~~~gr---~G--------~~l~--------~d~~~i~ei 262 (487)
..|+.....+.++++..+.+ +.+++.|..+-+..|.|......+. .+ .... ...+...+.
T Consensus 138 ~v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 138 GVMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp SEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred ceeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 34555555566777666544 4556669999998887532110000 00 0000 012345678
Q ss_pred HHHHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCC
Q psy7343 263 VSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGN 340 (487)
Q Consensus 263 v~~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGg 340 (487)
++++|+++ ++++.+...-+++..+..++++.++++|++.|-- + . .+.+++..+++++.+++||++.+.
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P-~-~~~d~~~~~~l~~~~~iPIa~dE~ 287 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWMED--------P-T-PAENQACFRLIRQHTVTPIAVGEV 287 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC--------C-S-CCSSGGGGHHHHTTCCSCEEECTT
T ss_pred HHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEEC--------C-C-ChHHHHHHHHHHhcCCCCEEeCCC
Confidence 88899887 5788887666778888899999999999998842 1 1 234678889999999999999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEe
Q psy7343 341 IQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 341 I~s~~da~~~l~~~Gad~Vmi 361 (487)
+.+..++.++++...+|.|++
T Consensus 288 ~~~~~~~~~~i~~ga~d~v~~ 308 (426)
T 4e4f_A 288 FNSIWDCKQLIEEQLIDYIRT 308 (426)
T ss_dssp CCSGGGTHHHHHTTCCSEECC
T ss_pred cCCHHHHHHHHHcCCCCEEEe
Confidence 999999999997777898864
No 243
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.27 E-value=0.00066 Score=63.65 Aligned_cols=81 Identities=12% Similarity=0.070 Sum_probs=57.7
Q ss_pred ccHHHHHHHHHHcCCcEEEEEcc--ccCCCCCCCCCCCHHHHHHHHhh--CCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGR--TVDQRGMNTGLASWEHITAVRKA--LTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgR--t~~~~g~~~g~~~~~~i~~i~~~--~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
.+..++ ...+ .|+|+|.+.+- |.. +.++.....|+.++++++. .++||++.|||+ ++++.+++ +.|+++|.
T Consensus 96 ~t~~e~-~~A~-~GaDyv~~g~vf~t~s-k~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~-~~Ga~gVa 170 (210)
T 3ceu_A 96 HSVEEV-KNRK-HFYDYVFMSPIYDSIS-KVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIK-DFGFGGAV 170 (210)
T ss_dssp CSHHHH-HTTG-GGSSEEEECCCC----------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHH-HTTCSEEE
T ss_pred CCHHHH-HHHh-hCCCEEEECCcCCCCC-CCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHH-HhCCCEEE
Confidence 345554 3345 89999998321 111 1112234578999999887 689999999998 88999999 69999999
Q ss_pred eccccccCcc
Q psy7343 361 TAEGNLYNPA 370 (487)
Q Consensus 361 iGRa~l~~P~ 370 (487)
+++++...++
T Consensus 171 v~s~i~~~~d 180 (210)
T 3ceu_A 171 VLGDLWNKFD 180 (210)
T ss_dssp ESHHHHTTCC
T ss_pred EhHHhHcCCC
Confidence 9999986543
No 244
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=97.27 E-value=0.0025 Score=65.27 Aligned_cols=135 Identities=16% Similarity=0.231 Sum_probs=97.7
Q ss_pred CCeeeeeccCCHHH-HHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEee
Q psy7343 204 RPLIIQFCGNDSKN-LTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~-~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR 279 (487)
.|+...+...++++ ..++++.+++ .+..+.+..|. .+++.-.+.++++++++ ++++.+...
T Consensus 138 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avR~a~g~~~~l~vDaN 202 (382)
T 3dgb_A 138 LPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGA---------------GEVDRDLAHVIAIKKALGDSASVRVDVN 202 (382)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCS---------------SCHHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred eeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEeCC
Confidence 44444444345554 4556666664 47766666554 13444556777788876 367777766
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+|+..+..++++.+++.|+.+|- | + . .+.+++..+++++.+++||.+...+.+..++.++++..++|.|
T Consensus 203 ~~~~~~~A~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v 272 (382)
T 3dgb_A 203 QAWDEAVALRACRILGGNGIDLIE-------Q-P-I-SRNNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVF 272 (382)
T ss_dssp TCBCHHHHHHHHHHHHTTTCCCEE-------C-C-B-CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCcCeee-------C-C-C-CccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 677888889999999999988773 2 1 1 2347899999999999999999999999999999977789999
Q ss_pred Eecc
Q psy7343 360 MTAE 363 (487)
Q Consensus 360 miGR 363 (487)
++--
T Consensus 273 ~~k~ 276 (382)
T 3dgb_A 273 ALKI 276 (382)
T ss_dssp EECH
T ss_pred Eecc
Confidence 8753
No 245
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=97.27 E-value=0.0015 Score=66.54 Aligned_cols=120 Identities=9% Similarity=0.145 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHH
Q psy7343 213 NDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 213 ~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~ 290 (487)
.+++++.+.++.+ ++.++.+.++.| | ..+.+ .++++++.+ ++++.+...-+|+.++ .++
T Consensus 140 ~~~~~~~~~a~~~~~~G~~~iKik~~-~-------------~~d~~----~v~avr~a~~~~~l~vDan~~~~~~~-~~~ 200 (369)
T 2zc8_A 140 PSVEDTLRVVERHLEEGYRRIKLKIK-P-------------GWDYE----VLKAVREAFPEATLTADANSAYSLAN-LAQ 200 (369)
T ss_dssp SSHHHHHHHHHHHHHTTCSCEEEECB-T-------------TBSHH----HHHHHHHHCTTSCEEEECTTCCCGGG-HHH
T ss_pred CCHHHHHHHHHHHHHhhhheeeeecC-h-------------hHHHH----HHHHHHHHcCCCeEEEecCCCCCHHH-HHH
Confidence 3788887766544 445777777643 1 12333 345555554 5677776655678888 999
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++++|++.|- | + . .+.+++..+++++.+++||.+.+.+.+..++.++++...+|.|++
T Consensus 201 ~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 201 LKRLDELRLDYIE-------Q-P-L-AYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp HHGGGGGCCSCEE-------C-C-S-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHhCCCcEEE-------C-C-C-CcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 9999999999875 1 1 2 235788899999999999999999999999999997777999886
No 246
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=97.22 E-value=0.0016 Score=67.10 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=81.2
Q ss_pred ChHHHHHHHHHHhhhc--cCcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC
Q psy7343 255 DWPLLTNLVSSLRQAV--QVPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL 331 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~--~iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~ 331 (487)
+++.-.++++++|+++ ++++.+...-++ +.++..++++.+++.|+++|- + + . .+.+++..+++++.+
T Consensus 182 ~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iE-------e-P-~-~~~~~~~~~~l~~~~ 251 (394)
T 3mqt_A 182 SDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIE-------A-C-L-QHDDLIGHQKLAAAI 251 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEE-------S-C-S-CTTCHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEE-------C-C-C-CcccHHHHHHHHhhC
Confidence 5667778888899887 577887766677 778889999999999999884 1 1 1 234789999999999
Q ss_pred CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 332 TIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 332 ~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
++||++.+.+.+..++.++++...+|.|++--
T Consensus 252 ~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 283 (394)
T 3mqt_A 252 NTRLCGAEMSTTRFEAQEWLEKTGISVVQSDY 283 (394)
T ss_dssp SSEEEECTTCCHHHHHHHHHHHHCCSEECCCT
T ss_pred CCCEEeCCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 99999999999999999999777899987643
No 247
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=97.21 E-value=0.0032 Score=64.64 Aligned_cols=131 Identities=14% Similarity=0.141 Sum_probs=96.1
Q ss_pred CHHHHHH-HHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHH
Q psy7343 214 DSKNLTE-AAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 214 d~~~~~~-aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e 289 (487)
++++..+ +++.. ++.|..+.+..|.+. +......++...+.++++|+++ ++++.+...-+++..+..+
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~--------~~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~ 217 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEV--------GRNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRAIE 217 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTT--------CTTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCc--------ccccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHH
Confidence 4554443 44433 445888888888742 1111123555667888899887 5678877766778888899
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
+++.+++.|+..|- | + . ...+++..+++++.+++||.+...+.+..++.++++...+|.|++-
T Consensus 218 ~~~~l~~~~i~~iE-------e-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d 280 (388)
T 3tcs_A 218 VGHMLQDHGFCHFE-------E-P-C-PYWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPD 280 (388)
T ss_dssp HHHHHHHTTCCEEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCC
T ss_pred HHHHHhhcCCeEEE-------C-C-C-CccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeC
Confidence 99999999998773 2 1 1 2347899999999999999999999999999999977778888654
No 248
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=97.19 E-value=0.0026 Score=65.33 Aligned_cols=132 Identities=13% Similarity=0.070 Sum_probs=96.4
Q ss_pred CCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc---cCcEEEEee
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV---QVPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~---~iPV~vKiR 279 (487)
.|+...+...+++++.+.++. +++.+..+.+..|++ +++.-.+.++++++++ ++++.+...
T Consensus 154 v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vDaN 218 (391)
T 4e8g_A 154 VPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVDGN 218 (391)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEECT
T ss_pred EEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEeCC
Confidence 345455556688888776654 445577777776651 3444456677777665 356666655
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+|+..+..++++.+++.++ .| +| + ..+++..+++++.+++||.+...+.+..|+.++++...+|.|
T Consensus 219 ~~w~~~~A~~~~~~L~~~~i-~i-------Ee-P----~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v 285 (391)
T 4e8g_A 219 RSLPSRDALRLSRECPEIPF-VL-------EQ-P----CNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGF 285 (391)
T ss_dssp TCCCHHHHHHHHHHCTTSCE-EE-------ES-C----SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCe-EE-------ec-C----CccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 56777788888888888876 54 22 2 247899999999999999999999999999999977779998
Q ss_pred Eecc
Q psy7343 360 MTAE 363 (487)
Q Consensus 360 miGR 363 (487)
++--
T Consensus 286 ~ik~ 289 (391)
T 4e8g_A 286 GMKL 289 (391)
T ss_dssp EEEH
T ss_pred EeCc
Confidence 8743
No 249
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.19 E-value=0.0018 Score=64.02 Aligned_cols=96 Identities=14% Similarity=0.204 Sum_probs=64.9
Q ss_pred HHHHHHHHhhhccCcEEEEeeccc----ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCc
Q psy7343 259 LTNLVSSLRQAVQVPVSCKIRIYQ----DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIP 334 (487)
Q Consensus 259 i~eiv~~v~~~~~iPV~vKiR~~~----d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iP 334 (487)
+.++++...+ .++|+++....+. |.+.....++...+.|+|.|-+. |++ +.++++.+..++|
T Consensus 160 i~~v~~~a~~-~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~---------~t~----e~~~~vv~~~~vP 225 (295)
T 3glc_A 160 IIQLVDAGMK-VGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY---------YVE----KGFERIVAGCPVP 225 (295)
T ss_dssp HHHHHHHHHT-TTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE---------CCT----TTHHHHHHTCSSC
T ss_pred HHHHHHHHHH-cCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC---------CCH----HHHHHHHHhCCCc
Confidence 3444444433 3799998543221 22223457888889999999872 222 2367788888999
Q ss_pred EEEcCCCC-CHHHHH----HHHHhcCCcEEEeccccccCc
Q psy7343 335 VIANGNIQ-CLADVE----ACLAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 335 Vi~nGgI~-s~~da~----~~l~~~Gad~VmiGRa~l~~P 369 (487)
|++.||+. +.+++. +.+ +.||+|+.+||.++..|
T Consensus 226 Vv~~GG~~~~~~~~l~~v~~ai-~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 226 IVIAGGKKLPEREALEMCWQAI-DQGASGVDMGRNIFQSD 264 (295)
T ss_dssp EEEECCSCCCHHHHHHHHHHHH-HTTCSEEEESHHHHTSS
T ss_pred EEEEECCCCCHHHHHHHHHHHH-HhCCeEEEeHHHHhcCc
Confidence 99999998 444444 445 47999999999988765
No 250
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=97.18 E-value=0.0067 Score=62.03 Aligned_cols=135 Identities=13% Similarity=0.140 Sum_probs=96.4
Q ss_pred CCeeeeeccCCHHHH-HHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc--CcEEEEee
Q psy7343 204 RPLIIQFCGNDSKNL-TEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ--VPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~-~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~--iPV~vKiR 279 (487)
.|+...+...++++. .++++.+++. +..+.+..|. .+++.-.+.++++++.++ +++.+...
T Consensus 137 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avR~a~g~~~~l~vDaN 201 (381)
T 3fcp_A 137 LPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGA---------------RELATDLRHTRAIVEALGDRASIRVDVN 201 (381)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCS---------------SCHHHHHHHHHHHHHHTCTTCEEEEECT
T ss_pred eeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCC---------------CChHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 455444544466554 4555666643 6766666554 134555667788888874 56776665
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
-+|+..+..++++.+++.|+..|- | + . ...+++..+++++.+++||.+...+.+..++.++++..++|.|
T Consensus 202 ~~~~~~~A~~~~~~l~~~~i~~iE-------e-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v 271 (381)
T 3fcp_A 202 QAWDAATGAKGCRELAAMGVDLIE-------Q-P-V-SAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAY 271 (381)
T ss_dssp TCBCHHHHHHHHHHHHHTTCSEEE-------C-C-B-CTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHHHHHHHHhhcCcccee-------C-C-C-CcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEE
Confidence 567778889999999999988773 2 1 1 2357899999999999999999999999999999977789999
Q ss_pred Eecc
Q psy7343 360 MTAE 363 (487)
Q Consensus 360 miGR 363 (487)
++--
T Consensus 272 ~~k~ 275 (381)
T 3fcp_A 272 ALKI 275 (381)
T ss_dssp EECH
T ss_pred Eecc
Confidence 8743
No 251
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.0002 Score=69.57 Aligned_cols=77 Identities=10% Similarity=-0.012 Sum_probs=66.4
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
.++.++++.+++.|++.+.+-- +.+ .+.+.++++.+.+.+||...|||++. ++++++ .|||.|.+|+.
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvD--------L~~-~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l--~Ga~~Viigs~ 105 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIK--------LGP-NNDDAAREALQESPQFLQVGGGINDT-NCLEWL--KWASKVIVTSW 105 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEE--------ESS-SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT--TTCSCEEECGG
T ss_pred CCHHHHHHHHHHcCCCEEEEEe--------CCC-CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh--cCCCEEEECcH
Confidence 4789999999999999887721 112 56889999999999999999999987 999998 89999999999
Q ss_pred cccC-----ccccc
Q psy7343 365 NLYN-----PALFT 373 (487)
Q Consensus 365 ~l~~-----P~lf~ 373 (487)
++.| |.++.
T Consensus 106 a~~~~g~~~p~~~~ 119 (260)
T 2agk_A 106 LFTKEGHFQLKRLE 119 (260)
T ss_dssp GBCTTCCBCHHHHH
T ss_pred HHhhcCCCCHHHHH
Confidence 9999 87765
No 252
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=97.17 E-value=0.0018 Score=66.71 Aligned_cols=98 Identities=6% Similarity=-0.044 Sum_probs=80.3
Q ss_pred ChHHHHHHHHHHhhhc--cCcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC
Q psy7343 255 DWPLLTNLVSSLRQAV--QVPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL 331 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~--~iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~ 331 (487)
+++.-.+.++++|+++ ++++.+...-++ +.++..++++.+++.|+++|-- + . .+.+++..+++++.+
T Consensus 187 ~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEe--------P-~-~~~d~~~~~~l~~~~ 256 (394)
T 3mkc_A 187 STKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELYFAEA--------T-L-QHDDLSGHAKLVENT 256 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEES--------C-S-CTTCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEEC--------C-C-CchhHHHHHHHHhhC
Confidence 5666778888899887 567777765677 7788899999999999998841 1 1 234789999999999
Q ss_pred CCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 332 TIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 332 ~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
++||++.+.+.+.+++.++++...+|.|++-
T Consensus 257 ~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 287 (394)
T 3mkc_A 257 RSRICGAEMSTTRFEAEEWITKGKVHLLQSD 287 (394)
T ss_dssp SSCBEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred CCCEEeCCCCCCHHHHHHHHHcCCCCeEecC
Confidence 9999999999999999999977778988754
No 253
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=97.16 E-value=0.0025 Score=65.68 Aligned_cols=132 Identities=13% Similarity=0.078 Sum_probs=95.4
Q ss_pred CCeeeeec-cCC--HHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEE
Q psy7343 204 RPLIIQFC-GND--SKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCK 277 (487)
Q Consensus 204 ~Pv~Vqi~-g~d--~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vK 277 (487)
.|+...+. ..+ ++.+.+.++.+ ++.+..+.++.+ | ..|. +.++++++++ ++++.+.
T Consensus 150 v~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~-------------~~d~----~~v~avR~a~G~~~~L~vD 211 (400)
T 3mwc_A 150 IESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-P-------------GWDV----EPLQETRRAVGDHFPLWTD 211 (400)
T ss_dssp EEBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-T-------------TBSH----HHHHHHHHHHCTTSCEEEE
T ss_pred EEeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-c-------------chHH----HHHHHHHHhcCCCCEEEEe
Confidence 45555554 235 88887766544 444777766653 1 1233 4455666665 5678877
Q ss_pred eecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 278 IRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 278 iR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
..-+|+..+ .++++.+++.|++.|- | + . .+.+++..+++++.+++||.+...+.+..++.++++...+|
T Consensus 212 aN~~w~~~~-~~~~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d 280 (400)
T 3mwc_A 212 ANSSFELDQ-WETFKAMDAAKCLFHE-------Q-P-L-HYEALLDLKELGERIETPICLDESLISSRVAEFVAKLGISN 280 (400)
T ss_dssp CTTCCCGGG-HHHHHHHGGGCCSCEE-------S-C-S-CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCS
T ss_pred CCCCCCHHH-HHHHHHHHhcCCCEEe-------C-C-C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCC
Confidence 666788888 8999999999998873 2 1 2 23478999999999999999999999999999999777899
Q ss_pred EEEeccc
Q psy7343 358 GVMTAEG 364 (487)
Q Consensus 358 ~VmiGRa 364 (487)
.|++--+
T Consensus 281 ~v~~k~~ 287 (400)
T 3mwc_A 281 IWNIKIQ 287 (400)
T ss_dssp EEEECHH
T ss_pred EEEEcch
Confidence 9987543
No 254
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.15 E-value=0.0052 Score=64.14 Aligned_cols=136 Identities=13% Similarity=0.152 Sum_probs=97.3
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ 282 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~ 282 (487)
+.||..|=+.-++-+..+ ++ ....|+|=|++.+ -+.+.+.++++.+++ .+..+.+-+
T Consensus 108 ~lPvLrKDFI~d~~Qi~e-a~--~~GAD~ILLi~a~---------------l~~~~l~~l~~~a~~-lgm~~LvEv---- 164 (452)
T 1pii_A 108 PQPILCKDFIIDPYQIYL-AR--YYQADACLLMLSV---------------LDDDQYRQLAAVAHS-LEMGVLTEV---- 164 (452)
T ss_dssp CSCEEEESCCCSHHHHHH-HH--HTTCSEEEEETTT---------------CCHHHHHHHHHHHHH-TTCEEEEEE----
T ss_pred CCCeEEEeccCCHHHHHH-HH--HcCCCEEEEEccc---------------CCHHHHHHHHHHHHH-cCCeEEEEe----
Confidence 689988866656654444 22 2236666666543 124567777776665 587777765
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
...+.++...+.|++.|-|..|.-.. -..+++...++.+.+ ++++|+-|||.|++|+.++. +. +|+|.
T Consensus 165 ---h~~eE~~~A~~lga~iIGinnr~L~t-----~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~-~~-a~avL 234 (452)
T 1pii_A 165 ---SNEEEQERAIALGAKVVGINNRDLRD-----LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELS-HF-ANGFL 234 (452)
T ss_dssp ---CSHHHHHHHHHTTCSEEEEESEETTT-----TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHT-TT-CSEEE
T ss_pred ---CCHHHHHHHHHCCCCEEEEeCCCCCC-----CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHH-Hh-CCEEE
Confidence 33444456667899999887774322 245788888887776 78999999999999999999 67 99999
Q ss_pred eccccccCccc
Q psy7343 361 TAEGNLYNPAL 371 (487)
Q Consensus 361 iGRa~l~~P~l 371 (487)
||.+++..++.
T Consensus 235 VGealmr~~d~ 245 (452)
T 1pii_A 235 IGSALMAHDDL 245 (452)
T ss_dssp ECHHHHTCSCH
T ss_pred EcHHHcCCcCH
Confidence 99999998765
No 255
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.11 E-value=0.013 Score=56.19 Aligned_cols=139 Identities=17% Similarity=0.202 Sum_probs=95.0
Q ss_pred CCCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeec
Q psy7343 201 PEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRI 280 (487)
Q Consensus 201 ~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~ 280 (487)
..+.||--|=|--|+-+..++... .+|+|=|-+.+ | +.+.+.++++..+ .++..+.+-+
T Consensus 102 ~v~lPvLrKDFiid~yQI~eAr~~---GADaILLI~a~-------------L--~~~~l~~l~~~A~-~lGl~~LvEV-- 160 (258)
T 4a29_A 102 SVSIPILMSDFIVKESQIDDAYNL---GADTVLLIVKI-------------L--TERELESLLEYAR-SYGMEPLILI-- 160 (258)
T ss_dssp TCSSCEEEESCCCSHHHHHHHHHH---TCSEEEEEGGG-------------S--CHHHHHHHHHHHH-HTTCCCEEEE--
T ss_pred hcCCCEeeccccccHHHHHHHHHc---CCCeeehHHhh-------------c--CHHHHHHHHHHHH-HHhHHHHHhc--
Confidence 456898777555576665554322 13433332222 1 3556667666544 4577777765
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
.+..| .+...+.|++.|-|-.|.- .+-..+.+...++...+ ++.+|+-+||.|++|+.++. ..|+|+
T Consensus 161 ----h~~~E-l~rAl~~~a~iIGINNRnL-----~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~-~~G~~a 229 (258)
T 4a29_A 161 ----NDEND-LDIALRIGARFIGIMSRDF-----ETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELR-KLGVNA 229 (258)
T ss_dssp ----SSHHH-HHHHHHTTCSEEEECSBCT-----TTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHH-HTTCCE
T ss_pred ----chHHH-HHHHhcCCCcEEEEeCCCc-----cccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHH-HCCCCE
Confidence 23344 4455568999998866632 22346788888888876 68889999999999999988 789999
Q ss_pred EEeccccccCccc
Q psy7343 359 VMTAEGNLYNPAL 371 (487)
Q Consensus 359 VmiGRa~l~~P~l 371 (487)
|.||.++|.+|+-
T Consensus 230 ~LVGealmr~~d~ 242 (258)
T 4a29_A 230 FLISSSLMRNPEK 242 (258)
T ss_dssp EEECHHHHHCTTH
T ss_pred EEECHHHhCCCcH
Confidence 9999999998863
No 256
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.09 E-value=0.0015 Score=61.58 Aligned_cols=112 Identities=11% Similarity=0.082 Sum_probs=67.9
Q ss_pred cceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEE-ccccCCCCCCCCC
Q psy7343 240 QMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVH-GRTVDQRGMNTGL 318 (487)
Q Consensus 240 ~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~Vh-gRt~~~~g~~~g~ 318 (487)
..++.|+.. ..+.+.++++.+++. ++...+.+ + ...+. +-++.+.+.|+|.+.++ +.+.. ..|.
T Consensus 85 d~i~vh~~~------~~~~~~~~~~~~~~~-g~~~~~d~-l--~~~T~-~~~~~~~~~g~d~v~~~~~~~~~----~~g~ 149 (218)
T 3jr2_A 85 DWITVSAAA------HIATIAACKKVADEL-NGEIQIEI-Y--GNWTM-QDAKAWVDLGITQAIYHRSRDAE----LAGI 149 (218)
T ss_dssp SEEEEETTS------CHHHHHHHHHHHHHH-TCEEEEEC-C--SSCCH-HHHHHHHHTTCCEEEEECCHHHH----HHTC
T ss_pred CEEEEecCC------CHHHHHHHHHHHHHh-CCccceee-e--ecCCH-HHHHHHHHcCccceeeeeccccc----cCCC
Confidence 445566541 234466777777654 55554321 1 22244 34445566799988763 22111 1121
Q ss_pred -CCHHHHHHHHhh--CCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 319 -ASWEHITAVRKA--LTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 319 -~~~~~i~~i~~~--~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
...+.++++++. .++|+++.||| +++.+.+++ +.|||++.+||++...
T Consensus 150 ~~~~~~l~~i~~~~~~~~pi~v~GGI-~~~~~~~~~-~aGAd~vvvGsaI~~a 200 (218)
T 3jr2_A 150 GWTTDDLDKMRQLSALGIELSITGGI-VPEDIYLFE-GIKTKTFIAGRALAGA 200 (218)
T ss_dssp CSCHHHHHHHHHHHHTTCEEEEESSC-CGGGGGGGT-TSCEEEEEESGGGSHH
T ss_pred cCCHHHHHHHHHHhCCCCCEEEECCC-CHHHHHHHH-HcCCCEEEEchhhcCC
Confidence 123444555444 48999999999 588898888 7899999999987754
No 257
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.08 E-value=0.0026 Score=60.62 Aligned_cols=76 Identities=22% Similarity=0.236 Sum_probs=56.7
Q ss_pred cccHHHHHHHHHHcCCcEEEEEccccCCCCCCC-CCCCHHHHHH--HHhhCCCcEEEcCCCCCHHHHHHHHHhcCCc--E
Q psy7343 284 VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT-GLASWEHITA--VRKALTIPVIANGNIQCLADVEACLAQTGVA--G 358 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~-g~~~~~~i~~--i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad--~ 358 (487)
.++....++...++|+|.|-.+ .|+.. +.++.+.++. +++.+++||.++|||+|.+|+.+++ +.|++ |
T Consensus 147 ~e~i~~a~ria~eaGADfVKTs------TG~~~~~gAt~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i-~aGa~RiG 219 (234)
T 1n7k_A 147 DKTLSLLVDSSRRAGADIVKTS------TGVYTKGGDPVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAV-GAGADIIG 219 (234)
T ss_dssp HHHHHHHHHHHHHTTCSEEESC------CSSSCCCCSHHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHH-HTTCSEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEeC------CCCCCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHH-HcCccccc
Confidence 3567778888899999999652 11122 4566666666 7777779999999999999999999 79999 5
Q ss_pred EEeccccc
Q psy7343 359 VMTAEGNL 366 (487)
Q Consensus 359 VmiGRa~l 366 (487)
+..|+.++
T Consensus 220 ~S~g~~I~ 227 (234)
T 1n7k_A 220 TSSAVKVL 227 (234)
T ss_dssp ETTHHHHH
T ss_pred hHHHHHHH
Confidence 55555443
No 258
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.07 E-value=0.0023 Score=61.02 Aligned_cols=142 Identities=11% Similarity=0.141 Sum_probs=85.5
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ 282 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~ 282 (487)
+.|+-+-+...||+.+.+.+.. + |+ ..++.|... . . +.+.++++.+++. ++.+.+-+.
T Consensus 57 ~~~~dvhLmv~dp~~~i~~~~~---a--------GA-d~itvh~Ea---~--~-~~~~~~i~~i~~~-G~k~gv~ln--- 114 (231)
T 3ctl_A 57 TKPLDCHLMVTRPQDYIAQLAR---A--------GA-DFITLHPET---I--N-GQAFRLIDEIRRH-DMKVGLILN--- 114 (231)
T ss_dssp CSCEEEEEESSCGGGTHHHHHH---H--------TC-SEEEECGGG---C--T-TTHHHHHHHHHHT-TCEEEEEEC---
T ss_pred CCcEEEEEEecCHHHHHHHHHH---c--------CC-CEEEECccc---C--C-ccHHHHHHHHHHc-CCeEEEEEE---
Confidence 6789999888888876654432 3 33 345555431 0 1 1245566666653 666666552
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-----CCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-----TIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-----~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
..+..+..+.+.+ ++|.|.+.+....-.|..-.+..++.++++++.. +++|.+.|||+ .+.+.++. +.|||
T Consensus 115 -p~tp~~~~~~~l~-~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~-~aGAd 190 (231)
T 3ctl_A 115 -PETPVEAMKYYIH-KADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLM-AAGAD 190 (231)
T ss_dssp -TTCCGGGGTTTGG-GCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHH-HHTCC
T ss_pred -CCCcHHHHHHHHh-cCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHH-HcCCC
Confidence 2233333333332 7999986433221111011233467777777654 68999999998 57788888 68999
Q ss_pred EEEec-cccccCcc
Q psy7343 358 GVMTA-EGNLYNPA 370 (487)
Q Consensus 358 ~VmiG-Ra~l~~P~ 370 (487)
.+.+| ++++..++
T Consensus 191 ~~V~G~saif~~~d 204 (231)
T 3ctl_A 191 VFIVGTSGLFNHAE 204 (231)
T ss_dssp EEEECTTTTGGGCS
T ss_pred EEEEccHHHhCCCC
Confidence 99999 98876544
No 259
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.05 E-value=0.0019 Score=62.51 Aligned_cols=123 Identities=17% Similarity=0.165 Sum_probs=80.3
Q ss_pred HHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc-CcEEEEeecc----cccccHHHHHH
Q psy7343 218 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VPVSCKIRIY----QDVNKTVEYAR 292 (487)
Q Consensus 218 ~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iPV~vKiR~~----~d~~~~~e~a~ 292 (487)
..++...++...|.||+-+.. |.....+++.+.+-++++++.++ -+..+|+-+. .|.+.....++
T Consensus 88 v~E~~~Av~~GAdEIDmVini----------g~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ 157 (260)
T 1p1x_A 88 LAETRAAIAYGADEVDVVFPY----------RALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASE 157 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECCH----------HHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeccH----------HhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHH
Confidence 344555556668888864322 22223478888888888887763 2345555442 12222567888
Q ss_pred HHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh-------CCCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 293 MLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA-------LTIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 293 ~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~-------~~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
...++|+|.|--+ .|...+.+..+.++.+++. .+++|-++|||+|.+|+.+++ +.|++
T Consensus 158 ia~eaGADfVKTS------TGf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i-~aga~ 222 (260)
T 1p1x_A 158 ISIKAGADFIKTS------TGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYL-AIADE 222 (260)
T ss_dssp HHHHTTCSEEECC------CSCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHH-HHHHH
T ss_pred HHHHhCCCEEEeC------CCCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHH-Hhhhh
Confidence 9999999999652 1212356778766665555 379999999999999999999 45443
No 260
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.04 E-value=0.0021 Score=62.82 Aligned_cols=122 Identities=16% Similarity=0.145 Sum_probs=78.1
Q ss_pred HHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChH---HHHHHHHHHhhhccCcEEEEeecc----cccccHHHH
Q psy7343 218 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP---LLTNLVSSLRQAVQVPVSCKIRIY----QDVNKTVEY 290 (487)
Q Consensus 218 ~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~---~i~eiv~~v~~~~~iPV~vKiR~~----~d~~~~~e~ 290 (487)
..++...++..+|+||+-+.. |..+..+++ .+.+-+.++++.++ ...+|+-+. .|.+.....
T Consensus 109 v~E~~~Av~~GAdEIDmVini----------g~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A 177 (281)
T 2a4a_A 109 LNDTEKALDDGADEIDLVINY----------KKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKT 177 (281)
T ss_dssp HHHHHHHHHHTCSEEEEECCH----------HHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecch----------HhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHH
Confidence 345555566668888864322 222223677 78888888888774 245555442 122225678
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh------------CCCcEEEcCCCCCHHHHHHHHHhcCCc
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA------------LTIPVIANGNIQCLADVEACLAQTGVA 357 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~------------~~iPVi~nGgI~s~~da~~~l~~~Gad 357 (487)
++...++|+|.|--+ .|...+.+..+.++.+++. .+++|-++|||+|.+|+.+++ +.|++
T Consensus 178 ~~ia~eaGADfVKTS------TGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i-~aga~ 249 (281)
T 2a4a_A 178 TLAVLNGNADFIKTS------TGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYI-LLARR 249 (281)
T ss_dssp HHHHHTTTCSEEECC------CSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHH-HHHHH
T ss_pred HHHHHHhCCCEEEeC------CCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHH-HHhhh
Confidence 888999999999652 1112255666555444433 378999999999999999999 45544
No 261
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.04 E-value=0.0023 Score=63.51 Aligned_cols=102 Identities=12% Similarity=0.201 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhhhccCcEEEEeec-cccc-------ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHH
Q psy7343 257 PLLTNLVSSLRQAVQVPVSCKIRI-YQDV-------NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328 (487)
Q Consensus 257 ~~i~eiv~~v~~~~~iPV~vKiR~-~~d~-------~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~ 328 (487)
+.+.++.+..+ ..++|+++.+-. +..+ +...+.++.+.+.|+|.|-++.-.. +..+++.+.++.
T Consensus 142 ~~i~~v~~~~~-~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~-------~~g~~~~~~~vv 213 (304)
T 1to3_A 142 NMVKEFNELCH-SNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLY-------GKGARSDLLTAS 213 (304)
T ss_dssp HHHHHHHHHHH-TTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGG-------GCSCHHHHHHHH
T ss_pred HHHHHHHHHHH-HcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcC-------CCCCHHHHHHHH
Confidence 44455555443 348999988632 1111 2245668888899999999943211 112677777776
Q ss_pred hh----CCCc-EEEcCCCCCHH----HHHHHHHhcCCcEEEeccccccC
Q psy7343 329 KA----LTIP-VIANGNIQCLA----DVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 329 ~~----~~iP-Vi~nGgI~s~~----da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
+. +++| |+..||+ +.+ .+..++ +.|++||.+||++...
T Consensus 214 ~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~-~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 214 QRLNGHINMPWVILSSGV-DEKLFPRAVRVAM-EAGASGFLAGRAVWSS 260 (304)
T ss_dssp HHHHHTCCSCEEECCTTS-CTTTHHHHHHHHH-HTTCCEEEESHHHHGG
T ss_pred HhccccCCCCeEEEecCC-CHHHHHHHHHHHH-HcCCeEEEEehHHhCc
Confidence 66 8999 9999999 453 356666 5799999999998876
No 262
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.02 E-value=0.0026 Score=60.62 Aligned_cols=85 Identities=12% Similarity=0.160 Sum_probs=59.6
Q ss_pred cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHH
Q psy7343 271 QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEA 349 (487)
Q Consensus 271 ~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~ 349 (487)
++|++.-+ .+..|+. ...+.|+|.|.+..- + ..| ..++++.++..+ ++|++..|||. ++++.+
T Consensus 127 gi~~ipGv------~TptEi~-~A~~~Gad~vK~FPa---~---~~g--G~~~lkal~~p~p~ip~~ptGGI~-~~n~~~ 190 (232)
T 4e38_A 127 GIDIVPGV------NNPSTVE-AALEMGLTTLKFFPA---E---ASG--GISMVKSLVGPYGDIRLMPTGGIT-PSNIDN 190 (232)
T ss_dssp TCEEECEE------CSHHHHH-HHHHTTCCEEEECST---T---TTT--HHHHHHHHHTTCTTCEEEEBSSCC-TTTHHH
T ss_pred CCCEEcCC------CCHHHHH-HHHHcCCCEEEECcC---c---ccc--CHHHHHHHHHHhcCCCeeeEcCCC-HHHHHH
Confidence 66665533 3455544 456789999988432 1 111 258899999876 79999999995 899999
Q ss_pred HHHhcCCcEEEeccccccCccccc
Q psy7343 350 CLAQTGVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 350 ~l~~~Gad~VmiGRa~l~~P~lf~ 373 (487)
.+ +.|+.++.+|.. +.++.++.
T Consensus 191 ~l-~aGa~~~vgGs~-l~~~~~i~ 212 (232)
T 4e38_A 191 YL-AIPQVLACGGTW-MVDKKLVT 212 (232)
T ss_dssp HH-TSTTBCCEEECG-GGCHHHHH
T ss_pred HH-HCCCeEEEECch-hcChHHhh
Confidence 99 789998877754 44555544
No 263
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=97.00 E-value=0.0013 Score=60.47 Aligned_cols=103 Identities=15% Similarity=0.155 Sum_probs=69.0
Q ss_pred HHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc-----C-------CC--------------
Q psy7343 259 LTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV-----D-------QR-------------- 312 (487)
Q Consensus 259 i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~-----~-------~~-------------- 312 (487)
+.++++.+++. +.||++..-+-.....-.+..+.++..++|+|+= .+.. . |+
T Consensus 45 L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL~~~~pdGIIs-Tk~~~i~~Akk~GL~tIqR~FliDs~al~~~~~ 122 (188)
T 1vkf_A 45 LKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFVKKAGADGIIT-IKPKNYVVAKKNGIPAVLRFFALDSKAVERGIE 122 (188)
T ss_dssp HHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHHHHHTCSEEEE-SCHHHHHHHHHTTCCEEEEEECCSHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHHHhcCCCEEEc-CcHHHHHHHHHcCCEEeeEEEEEEeHHHhhhhh
Confidence 78888888888 9999998755333333344555557789999864 3220 0 00
Q ss_pred ------C----CCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 313 ------G----MNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 313 ------g----~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
+ -+.|..-.+.++++ +++|+|+.|+|+|.||+.+ + +.||++|..|+--+++
T Consensus 123 ~I~~~kPD~iEiLPg~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l-~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 123 QIETLGVDVVEVLPGAVAPKVARKI---PGRTVIAAGLVETEEEARE-I-LKHVSAISTSSRILWK 183 (188)
T ss_dssp HHHHHTCSEEEEESGGGHHHHHTTS---TTSEEEEESCCCSHHHHHH-H-TTTSSEEEECCHHHHT
T ss_pred hccccCCCeEeecCCCchHHHHHHh---cCCCEEEECCcCCHHHHHH-H-HCCCeEEEeCCHHHhC
Confidence 0 01111112333333 6889999999999999999 8 8999999999766654
No 264
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=96.93 E-value=0.0049 Score=60.87 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=65.4
Q ss_pred HHHHHHHHhhhccC-cEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcE
Q psy7343 259 LTNLVSSLRQAVQV-PVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPV 335 (487)
Q Consensus 259 i~eiv~~v~~~~~i-PV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPV 335 (487)
+.+-++++++..+- +|.+-+ ++..+ ++...++|+|+|+++. .+.+.++++++.+ +++|
T Consensus 195 i~~ai~~~r~~~~~~kI~vev------~tlee-~~eA~~aGaD~I~ld~------------~~~e~l~~~v~~~~~~~~I 255 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEV------ENLDE-LDDALKAGADIIMLDN------------FNTDQMREAVKRVNGQARL 255 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEE------SSHHH-HHHHHHTTCSEEEESS------------CCHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHHhCCCCcEEEEe------CCHHH-HHHHHHcCCCEEEECC------------CCHHHHHHHHHHhCCCCeE
Confidence 34555666665532 555544 34444 4444578999999932 3456777777766 6999
Q ss_pred EEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 336 IANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 336 i~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
.++||| +.+.+.++. ++|+|++.+|.....-|++
T Consensus 256 ~ASGGI-t~~~i~~~a-~~GvD~isvGsli~~a~~~ 289 (296)
T 1qap_A 256 EVSGNV-TAETLREFA-ETGVDFISVGALTKHVRAL 289 (296)
T ss_dssp EECCCS-CHHHHHHHH-HTTCSEEECSHHHHEEECC
T ss_pred EEECCC-CHHHHHHHH-HcCCCEEEEeHHHcCCCCC
Confidence 999999 999999999 7999999999966555544
No 265
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=96.93 E-value=0.0012 Score=67.96 Aligned_cols=125 Identities=9% Similarity=-0.017 Sum_probs=90.8
Q ss_pred HHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccc--cCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHH
Q psy7343 216 KNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYL--QDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 216 ~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l--~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~ 290 (487)
+.+.+.++.+ ++.|+.+.++.|... ..+ .++.+...++++++++++ ++++.+..--+++.++..++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~---------~~~~~~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~ 220 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGG---------RHMPLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEV 220 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHH---------HTSCHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCc---------ccCCccccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 7777766654 445888888766411 111 124566667888888876 46777655445677778888
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh-----CCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA-----LTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~-----~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++++|++.|- + + .. .+++..+++++. +++||++.+ +.+.++++++++...+|.|++
T Consensus 221 ~~~l~~~~i~~iE-------~-P-~~--~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~i 284 (392)
T 3p3b_A 221 LAALSDVNLYWLE-------E-A-FH--EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHHTTTSCEEEEE-------C-S-SS--CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECC
T ss_pred HHHHHhcCCCEEe-------c-C-Cc--ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEe
Confidence 9999988887653 2 1 22 578899999998 899999999 999999999997667898865
No 266
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.93 E-value=0.011 Score=55.58 Aligned_cols=85 Identities=16% Similarity=0.141 Sum_probs=60.9
Q ss_pred ccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHH
Q psy7343 270 VQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVE 348 (487)
Q Consensus 270 ~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~ 348 (487)
.+++++.-. .+..++ ....+.|+|.|.++.- .. .. -.+.++.+++.+ ++|+++.|||+ .+++.
T Consensus 108 ~g~~~i~G~------~t~~e~-~~A~~~Gad~v~~Fpa--~~---~g---G~~~lk~i~~~~~~ipvvaiGGI~-~~n~~ 171 (214)
T 1wbh_A 108 GTIPLIPGI------STVSEL-MLGMDYGLKEFKFFPA--EA---NG---GVKALQAIAGPFSQVRFCPTGGIS-PANYR 171 (214)
T ss_dssp SSSCEEEEE------SSHHHH-HHHHHTTCCEEEETTT--TT---TT---HHHHHHHHHTTCTTCEEEEBSSCC-TTTHH
T ss_pred hCCCEEEec------CCHHHH-HHHHHCCCCEEEEecC--cc---cc---CHHHHHHHhhhCCCCeEEEECCCC-HHHHH
Confidence 466666532 244444 5566789999999541 00 11 257899999988 89999999995 68899
Q ss_pred HHHHhcCCcEEEeccccccCccc
Q psy7343 349 ACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 349 ~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++++..|+++|. |+++...+.+
T Consensus 172 ~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 172 DYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp HHHTSTTBSCEE-EGGGSCHHHH
T ss_pred HHHhcCCCeEEE-eccccChhhh
Confidence 999434999999 9887776655
No 267
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.92 E-value=0.003 Score=61.73 Aligned_cols=133 Identities=16% Similarity=0.159 Sum_probs=85.2
Q ss_pred HHHHHHHhhCCcCcEEEe--ecCCCcceeeccCcccccc---CChHHHHHHHHHHhhhccCcEEEEeeccc----ccccH
Q psy7343 217 NLTEAAKLAEPHCDGIDI--NIGCPQMVAKRGHYGAYLQ---DDWPLLTNLVSSLRQAVQVPVSCKIRIYQ----DVNKT 287 (487)
Q Consensus 217 ~~~~aa~~~~~~~d~Idi--N~GcP~~i~~~gr~G~~l~---~d~~~i~eiv~~v~~~~~iPV~vKiR~~~----d~~~~ 287 (487)
...++...+++.+|.||+ |.|. .+. .+++.+.+-++++++.++ +..+|+-+.. +.+..
T Consensus 102 K~~Ea~~Av~~GAdEIDmVinig~------------lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i 168 (297)
T 4eiv_A 102 VSLEAVGALKDGADEIECLIDWRR------------MNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDII 168 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTHH------------HHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeeeHHH------------HhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHH
Confidence 445666677777888885 4332 112 378888888888888874 5567765532 22224
Q ss_pred HHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC------------------------CCcEEEc-CCCC
Q psy7343 288 VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL------------------------TIPVIAN-GNIQ 342 (487)
Q Consensus 288 ~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~------------------------~iPVi~n-GgI~ 342 (487)
..+++...++|+|+|--+ . |...+.+..+.++.+++.+ ++-|=++ |||+
T Consensus 169 ~~A~~ia~~AGADFVKTS----T--Gf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIr 242 (297)
T 4eiv_A 169 SRAAVAALEGGADFLQTS----S--GLGATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVH 242 (297)
T ss_dssp HHHHHHHHHHTCSEEECC----C--SSSSCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCC
T ss_pred HHHHHHHHHhCCCEEEcC----C--CCCCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCC
Confidence 567788889999999641 1 2223456666555554433 4778899 9999
Q ss_pred CHHHHHHHHHhcCCcEEEeccccccCccccc
Q psy7343 343 CLADVEACLAQTGVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 343 s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~ 373 (487)
|.+|+.++++ ...+ +|...+ +|..|+
T Consensus 243 t~e~A~~~i~-~~~e---lG~~wl-~~~~fR 268 (297)
T 4eiv_A 243 MAETADFLMQ-MIFE---NGPRSI-VRDKFR 268 (297)
T ss_dssp HHHHHHHHHH-HHHH---HCGGGC-STTTEE
T ss_pred CHHHHHHHHH-HHHH---hCcccc-CCCceE
Confidence 9999999995 2222 454433 455554
No 268
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.92 E-value=0.0052 Score=60.65 Aligned_cols=148 Identities=14% Similarity=0.187 Sum_probs=93.7
Q ss_pred CCCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCc-cccccCChHHHHHHHHHHhhh-ccCcEEEE
Q psy7343 203 DRPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHY-GAYLQDDWPLLTNLVSSLRQA-VQVPVSCK 277 (487)
Q Consensus 203 ~~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~-G~~l~~d~~~i~eiv~~v~~~-~~iPV~vK 277 (487)
+.||++-+- | .++++..+.++.+++. +.+|.|--+.-.+ +.|.. |..+. +.+...+-+++.+++ .+.++.++
T Consensus 83 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k--~cGh~~gk~l~-~~~e~~~ri~Aa~~A~~~~~~~I~ 159 (298)
T 3eoo_A 83 NLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQK--RCGHRPGKECV-PAGEMVDRIKAAVDARTDETFVIM 159 (298)
T ss_dssp CSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCC--CTTCCCCCCBC-CHHHHHHHHHHHHHHCSSTTSEEE
T ss_pred CCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCc--ccCCCCCCeec-CHHHHHHHHHHHHHhccCCCeEEE
Confidence 579988865 3 3788888888877665 7888887554111 22222 23343 344333333344433 35678888
Q ss_pred eecc----cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEc---CCCCCHHHHHHH
Q psy7343 278 IRIY----QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIAN---GNIQCLADVEAC 350 (487)
Q Consensus 278 iR~~----~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~n---GgI~s~~da~~~ 350 (487)
.|.. .+.++.++-++...++|+|.|.+++. .+.+.++++.+.+++|+.+| ||-...-+..++
T Consensus 160 ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~-----------~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL 228 (298)
T 3eoo_A 160 ARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAM-----------KTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDEL 228 (298)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC-----------CSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHH
T ss_pred EeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCC-----------CCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHH
Confidence 7763 13445677778888999999999654 25678899999999999876 332111123444
Q ss_pred HHhcCCcEEEecccc
Q psy7343 351 LAQTGVAGVMTAEGN 365 (487)
Q Consensus 351 l~~~Gad~VmiGRa~ 365 (487)
- +.|+..|..|-.+
T Consensus 229 ~-~lGv~~v~~~~~~ 242 (298)
T 3eoo_A 229 K-GANVDIALYCCGA 242 (298)
T ss_dssp H-HTTCCEEEECSHH
T ss_pred H-HcCCeEEEEchHH
Confidence 4 6899999988543
No 269
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.91 E-value=0.0033 Score=63.96 Aligned_cols=95 Identities=21% Similarity=0.395 Sum_probs=73.2
Q ss_pred ChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCc
Q psy7343 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIP 334 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iP 334 (487)
+++...+.++.+++...+|+.+++-. .. .+.++.+.++|+|.|.|+.- . + . .....+.++++++.+++|
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~----~~-~e~a~~l~eaGad~I~ld~a---~-G-~-~~~~~~~i~~i~~~~~~~ 147 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGV----NE-IERAKLLVEAGVDVIVLDSA---H-G-H-SLNIIRTLKEIKSKMNID 147 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECT----TC-HHHHHHHHHTTCSEEEECCS---C-C-S-BHHHHHHHHHHHHHCCCE
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCC----CH-HHHHHHHHHcCcCeEEEeCC---C-C-C-cHHHHHHHHHHHHhcCCc
Confidence 56777788888887778999999832 23 78888999999999998321 0 0 1 011247888888888999
Q ss_pred EEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 335 VIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 335 Vi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
|++ |++.|.++++++. +.|+|+|.+|
T Consensus 148 Viv-g~v~t~e~A~~l~-~aGaD~I~VG 173 (361)
T 3khj_A 148 VIV-GNVVTEEATKELI-ENGADGIKVG 173 (361)
T ss_dssp EEE-EEECSHHHHHHHH-HTTCSEEEEC
T ss_pred EEE-ccCCCHHHHHHHH-HcCcCEEEEe
Confidence 997 6789999999988 7899999996
No 270
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=96.90 E-value=0.0018 Score=65.39 Aligned_cols=126 Identities=16% Similarity=0.170 Sum_probs=78.9
Q ss_pred hhcChhHHHHHHh--cCCCCCCeeeeecc-------CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCC
Q psy7343 186 FIADKKLRQEILM--STPEDRPLIIQFCG-------NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDD 255 (487)
Q Consensus 186 Ll~~~~~~~~~l~--~~~~~~Pv~Vqi~g-------~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d 255 (487)
+.+......++++ +...+.||+|+|.. .+.+++.++++.+++. .|.|+++.|.... .. ...+. ..+
T Consensus 190 lenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~-~~-~~~~~--~~~ 265 (340)
T 3gr7_A 190 PENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP-AR-MNVYP--GYQ 265 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSC-CC-CCCCT--TTT
T ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccC-CC-CCCCc--ccc
Confidence 3344444455553 11127899999974 3577889999998887 8999998664111 00 00010 013
Q ss_pred hHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC
Q psy7343 256 WPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT 332 (487)
Q Consensus 256 ~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~ 332 (487)
++ +++.+++.+++||++++ ++.+..++.+.+++.++|.|++ ||.... +-+++.++++.++
T Consensus 266 ~~----~~~~ik~~~~iPVi~~G----gI~s~e~a~~~L~~G~aD~V~i-GR~~la--------nPdl~~ki~~~l~ 325 (340)
T 3gr7_A 266 VP----FAELIRREADIPTGAVG----LITSGWQAEEILQNGRADLVFL-GRELLR--------NPYWPYAAARELG 325 (340)
T ss_dssp HH----HHHHHHHHTTCCEEEES----SCCCHHHHHHHHHTTSCSEEEE-CHHHHH--------CTTHHHHHHHHTT
T ss_pred HH----HHHHHHHHcCCcEEeeC----CCCCHHHHHHHHHCCCeeEEEe-cHHHHh--------CchHHHHHHHHCC
Confidence 33 45557777899999998 5556777777776656999999 885321 2244667666553
No 271
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.88 E-value=0.018 Score=56.20 Aligned_cols=139 Identities=19% Similarity=0.195 Sum_probs=96.7
Q ss_pred CCCeeeeec---cCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc---cCcEE
Q psy7343 203 DRPLIIQFC---GNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV---QVPVS 275 (487)
Q Consensus 203 ~~Pv~Vqi~---g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~---~iPV~ 275 (487)
+.||++-+- |.++++..+.++.+.++ +.+|.|--+.. |+ |..+ .+.+...+-+++++++. ++|+.
T Consensus 76 ~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~-----~~--~k~l-~~~~e~~~~I~aa~~a~~~~g~~~~ 147 (275)
T 2ze3_A 76 AIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATG-----LT--PTEL-YDLDSQLRRIEAARAAIDASGVPVF 147 (275)
T ss_dssp SSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCS-----SS--SSCB-CCHHHHHHHHHHHHHHHHHHTSCCE
T ss_pred CCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcC-----CC--CCcc-CCHHHHHHHHHHHHHhHhhcCCCeE
Confidence 479998875 35788888888776666 77887775541 21 3333 35666666666666553 78999
Q ss_pred EEeeccc-----------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcC--CCC
Q psy7343 276 CKIRIYQ-----------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANG--NIQ 342 (487)
Q Consensus 276 vKiR~~~-----------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nG--gI~ 342 (487)
++.|... ..++..+-++.++++|+|.|.+++. .+.+.++++.+.+++|+-.++ +..
T Consensus 148 i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~n~~~~~~~~ 216 (275)
T 2ze3_A 148 LNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLA-----------LQSQDIRALADALRVPLNVMAFPGSP 216 (275)
T ss_dssp EEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTC-----------CCHHHHHHHHHHCSSCEEEECCTTSC
T ss_pred EEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCC-----------CCHHHHHHHHHhcCCCEEEecCCCCC
Confidence 9888742 2356677778889999999998432 456789999999999987664 344
Q ss_pred CHHHHHHHHHhcCCcEEEeccc
Q psy7343 343 CLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 343 s~~da~~~l~~~Gad~VmiGRa 364 (487)
+. .++- +.|+..|..|-.
T Consensus 217 ~~---~eL~-~lGv~~v~~~~~ 234 (275)
T 2ze3_A 217 VP---RALL-DAGAARVSFGQS 234 (275)
T ss_dssp CH---HHHH-HTTCSEEECTTH
T ss_pred CH---HHHH-HcCCcEEEEChH
Confidence 44 3443 689999988743
No 272
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=96.87 E-value=0.0066 Score=61.24 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=71.9
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeecc-------CCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccC
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFCG-------NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g-------~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~ 254 (487)
+.+......++++ ....+.||+|+|.. .+.+++.++++.+++..|.|++..|...........+ .
T Consensus 189 lenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~~~----~ 264 (343)
T 3kru_A 189 IENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPG----Y 264 (343)
T ss_dssp HHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTT----T
T ss_pred hHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeecccCc----e
Confidence 4444444555553 34457799999874 3478889999988777899999655411100000001 1
Q ss_pred ChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
+++ +++.+++.+++||++++ ++.+..++.+.+++.++|.|++ ||.
T Consensus 265 ~~~----~~~~ir~~~~iPVi~~G----gi~t~e~Ae~~l~~G~aD~V~i-GR~ 309 (343)
T 3kru_A 265 QVK----YAETIKKRCNIKTSAVG----LITTQELAEEILSNERADLVAL-GRE 309 (343)
T ss_dssp THH----HHHHHHHHHTCEEEEES----SCCCHHHHHHHHHTTSCSEEEE-SHH
T ss_pred eeh----HHHHHHHhcCcccceee----eeeHHHHHHHHHhchhhHHHHH-HHH
Confidence 333 44557777899999998 5556777777777766999999 985
No 273
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=96.87 E-value=0.039 Score=54.10 Aligned_cols=149 Identities=16% Similarity=0.142 Sum_probs=97.5
Q ss_pred CCCCCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEE
Q psy7343 201 PEDRPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSC 276 (487)
Q Consensus 201 ~~~~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~v 276 (487)
..+.||++-+- | .++++..+.++.+.++ +++|.|--+...+ +.|...+. +.+.+...+-+++++++- +.++.+
T Consensus 80 ~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pK--rcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i 156 (287)
T 3b8i_A 80 VARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPA--QFGRKSTD-LICVEEGVGKIRAALEARVDPALTI 156 (287)
T ss_dssp TCSSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSC--CTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEE
T ss_pred cCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCcc--ccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEE
Confidence 34679888764 2 3788888888776666 8888887664212 22333334 456666666666666553 445666
Q ss_pred Eeeccc---ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEc-CCCCCHHHHHHHHH
Q psy7343 277 KIRIYQ---DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIAN-GNIQCLADVEACLA 352 (487)
Q Consensus 277 KiR~~~---d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~n-GgI~s~~da~~~l~ 352 (487)
+.|... +.++..+-++.++++|+|.|.+++- .+.+.++++.+.+++|++.. ||-...-+..++-
T Consensus 157 ~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~eL~- 224 (287)
T 3b8i_A 157 IARTNAELIDVDAVIQRTLAYQEAGADGICLVGV-----------RDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLA- 224 (287)
T ss_dssp EEEEETTTSCHHHHHHHHHHHHHTTCSEEEEECC-----------CSHHHHHHHHTTCCSCEEEECTTCGGGCCHHHHH-
T ss_pred EEechhhhcCHHHHHHHHHHHHHcCCCEEEecCC-----------CCHHHHHHHHHhCCCCEEEeCCCCCCCCCHHHHH-
Confidence 666532 1245777788999999999999643 34678999999999999842 3222112334444
Q ss_pred hcCCcEEEeccc
Q psy7343 353 QTGVAGVMTAEG 364 (487)
Q Consensus 353 ~~Gad~VmiGRa 364 (487)
+.|+..|..|-.
T Consensus 225 ~lGv~~v~~~~~ 236 (287)
T 3b8i_A 225 RLGVRVVVNGHA 236 (287)
T ss_dssp HTTEEEEECCCH
T ss_pred HcCCcEEEEChH
Confidence 689999988854
No 274
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=96.85 E-value=0.0051 Score=63.73 Aligned_cols=149 Identities=9% Similarity=0.059 Sum_probs=101.3
Q ss_pred CCCeeeeeccCCHHHHHHHHH-hhCCcCcEEEeecCCCcceee-----ccCccccc---cCChHHHHHHHHHHhhhc--c
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAK-----RGHYGAYL---QDDWPLLTNLVSSLRQAV--Q 271 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~-----~gr~G~~l---~~d~~~i~eiv~~v~~~~--~ 271 (487)
..|+.....+.+++++.+.++ .+++.+..+.+..|.+..... ........ ..+.+...+.++++++++ +
T Consensus 142 ~v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~ 221 (421)
T 4hnl_A 142 AIPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQ 221 (421)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ccceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCC
Confidence 345555555667888776655 445568999998886321100 00001111 122455567777888877 4
Q ss_pred CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHH
Q psy7343 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACL 351 (487)
Q Consensus 272 iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l 351 (487)
+.+.+..--+++..+..++++.++++++..+-= + ....+++..+++++.+++||.+.-.+.+..++.+++
T Consensus 222 ~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEe--------P--~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i 291 (421)
T 4hnl_A 222 FQMLHDVHERLHPNQAIQFAKAAEPYQLFFLED--------I--LPPDQSHWLTQLRSQSATPIATGELFNNPMEWQELV 291 (421)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------C--SCGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHH
T ss_pred ceEeccccccCCHHHHHHHHHHhhhhhhccccc--------C--CcccchHHHHHHHhcCCCCeecCcceehhHHHHHHH
Confidence 555554434567778899999999999887731 1 123468889999999999999999999999999999
Q ss_pred HhcCCcEEEe
Q psy7343 352 AQTGVAGVMT 361 (487)
Q Consensus 352 ~~~Gad~Vmi 361 (487)
+...+|.|++
T Consensus 292 ~~~a~d~v~~ 301 (421)
T 4hnl_A 292 KNRQIDFMRA 301 (421)
T ss_dssp HTTCCSEECC
T ss_pred hcCCceEEEe
Confidence 7777888764
No 275
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.84 E-value=0.017 Score=54.12 Aligned_cols=139 Identities=13% Similarity=0.042 Sum_probs=82.0
Q ss_pred CCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccc
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQD 283 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d 283 (487)
.++=+|+. ..++.+.+. +.++ |+ ..++.|...| .+.+.++++.+++. +.++.+.+--..+
T Consensus 59 v~lD~kl~-dip~t~~~~---~~~~--------Ga-d~itvh~~~g------~~~l~~~~~~~~~~-g~~~~~~ll~~~t 118 (216)
T 1q6o_A 59 VLADAKIA-DAGKILSRM---CFEA--------NA-DWVTVICCAD------INTAKGALDVAKEF-NGDVQIELTGYWT 118 (216)
T ss_dssp EEEEEEEC-SCHHHHHHH---HHHT--------TC-SEEEEETTSC------HHHHHHHHHHHHHT-TCEEEEEECSCCC
T ss_pred EEEEEEec-ccHHHHHHH---HHhC--------CC-CEEEEeccCC------HHHHHHHHHHHHHc-CCCceeeeeeCCC
Confidence 34456765 356766552 2233 33 3455555322 33455666666653 6666554310111
Q ss_pred cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 284 VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
..-.+.+++.|.+.+.+|--.-....++.| ..+.++++++.. ++||++.|||+ ++.+.+++ +.|||++.+
T Consensus 119 ----~~~~~~l~~~~~~~~vl~~a~~~~~~G~~g--~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~-~aGad~ivv 190 (216)
T 1q6o_A 119 ----WEQAQQWRDAGIGQVVYHRSRDAQAAGVAW--GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFK-GIPIHVFIA 190 (216)
T ss_dssp ----HHHHHHHHHTTCCEEEEECCHHHHHTTCCC--CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGT-TSCCSEEEE
T ss_pred ----hhhHHHHHhcCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHH-HcCCCEEEE
Confidence 223345566787777664211111122333 356677777765 68899999998 77788888 789999999
Q ss_pred ccccccCcc
Q psy7343 362 AEGNLYNPA 370 (487)
Q Consensus 362 GRa~l~~P~ 370 (487)
||++...++
T Consensus 191 G~~I~~a~d 199 (216)
T 1q6o_A 191 GRSIRDAAS 199 (216)
T ss_dssp SHHHHTSSC
T ss_pred eehhcCCCC
Confidence 999886543
No 276
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=96.83 E-value=0.013 Score=59.43 Aligned_cols=134 Identities=14% Similarity=0.117 Sum_probs=90.6
Q ss_pred CCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecc
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIY 281 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~ 281 (487)
.|+...+...+++++.+.++. +++.+..+.+..|. .+++.-.+.++++++.+ ++++.+...-+
T Consensus 133 v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~---------------~~~~~d~~~v~avr~~~~~~~l~vDaN~~ 197 (365)
T 3ik4_A 133 LETDMTITAGDEVHAAASAKAILARGIKSIKVKTAG---------------VDVAYDLARLRAIHQAAPTAPLIVDGNCG 197 (365)
T ss_dssp EEBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCS---------------SCHHHHHHHHHHHHHHSSSCCEEEECTTC
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCC---------------CCHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 344445555688888776654 44446555555443 13555566677777776 34444433335
Q ss_pred cccccHHHHHHHH--HHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 282 QDVNKTVEYARML--ERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 282 ~d~~~~~e~a~~l--e~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
|+..+..++++.+ ++.++.+|- | + . ...+++..+++++.+++||.+...+.+..++.++++...+|.|
T Consensus 198 ~~~~~A~~~~~~L~~~~~~i~~iE-------e-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v 267 (365)
T 3ik4_A 198 YDVERALAFCAACKAESIPMVLFE-------Q-P-L-PREDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVI 267 (365)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE-------C-C-S-CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEE
T ss_pred CCHHHHHHHHHHHhhCCCCceEEE-------C-C-C-CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEE
Confidence 6677788888888 555555443 1 1 1 2347899999999999999999999999999999977778988
Q ss_pred Eec
Q psy7343 360 MTA 362 (487)
Q Consensus 360 miG 362 (487)
++=
T Consensus 268 ~ik 270 (365)
T 3ik4_A 268 NIK 270 (365)
T ss_dssp EEC
T ss_pred EEc
Confidence 753
No 277
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.82 E-value=0.031 Score=52.15 Aligned_cols=182 Identities=11% Similarity=0.117 Sum_probs=103.2
Q ss_pred cCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeec-cCCHHHHHHHHHhhCCcCcEEEee
Q psy7343 157 VDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC-GNDSKNLTEAAKLAEPHCDGIDIN 235 (487)
Q Consensus 157 a~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~~d~IdiN 235 (487)
.|+++..=...+.+.|++.+.--+...+.=.-+++...++....+. ....|-++ ..++++..+.++.+. .|.|+||
T Consensus 7 CGit~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~-~~~~VgVfvn~~~~~i~~~~~~~~--ld~vQLH 83 (205)
T 1nsj_A 7 CGITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPP-FVFRVGVFVNEEPEKILDVASYVQ--LNAVQLH 83 (205)
T ss_dssp CCCCSHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCS-SSEEEEEESSCCHHHHHHHHHHHT--CSEEEEC
T ss_pred CCCCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCC-CCCEEEEEeCCCHHHHHHHHHhhC--CCEEEEC
Confidence 4566554445666788865321111111111134455555544332 22233334 456666666665442 4555555
Q ss_pred cCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCC
Q psy7343 236 IGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMN 315 (487)
Q Consensus 236 ~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~ 315 (487)
|. .+++.+.+ +++ ++|++--+++. +..++ ..+.++.+|++.+.+... ..|+.
T Consensus 84 ----------G~------e~~~~~~~----l~~--~~~vika~~v~----~~~~l-~~~~~~~~d~~LlD~~~~-~~GGt 135 (205)
T 1nsj_A 84 ----------GE------EPIELCRK----IAE--RILVIKAVGVS----NERDM-ERALNYREFPILLDTKTP-EYGGS 135 (205)
T ss_dssp ----------SC------CCHHHHHH----HHT--TSEEEEEEEES----SHHHH-HHHGGGTTSCEEEEESCS-SSSSC
T ss_pred ----------CC------CCHHHHHH----Hhc--CCCEEEEEEcC----CHHHH-HHHHHcCCCEEEECCCCC-CCCCC
Confidence 32 34555443 332 46787666553 22333 233444599999965433 22333
Q ss_pred CCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 316 TGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 316 ~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
....+|+.++.++ ..+.|++.+||+ +++.+.++++..++.||-+.+|.-..|-.
T Consensus 136 G~~fdw~~l~~~~-~~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~pG~ 189 (205)
T 1nsj_A 136 GKTFDWSLILPYR-DRFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFPGK 189 (205)
T ss_dssp CSCCCGGGTGGGG-GGSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGEEETTE
T ss_pred CCccCHHHHHhhh-cCCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCceecCCCC
Confidence 3356898776542 337899999999 57888888766799999999998865643
No 278
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.82 E-value=0.0029 Score=61.81 Aligned_cols=91 Identities=15% Similarity=0.191 Sum_probs=62.8
Q ss_pred HHHHHHHhhhcc--CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-----C
Q psy7343 260 TNLVSSLRQAVQ--VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-----T 332 (487)
Q Consensus 260 ~eiv~~v~~~~~--iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-----~ 332 (487)
.+-++.+++..+ .++.+-. ++..+ ++...++|+|+|+++.- +.+.++++++.+ +
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev------~tlee-~~~A~~aGaD~I~ld~~------------~~~~l~~~v~~l~~~~~~ 229 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIEC------ESFEE-AKNAMNAGADIVMCDNL------------SVLETKEIAAYRDAHYPF 229 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEE------SSHHH-HHHHHHHTCSEEEEETC------------CHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCCCceEEEEc------CCHHH-HHHHHHcCCCEEEECCC------------CHHHHHHHHHHhhccCCC
Confidence 455666666654 3566644 34444 44444689999999431 234555444433 4
Q ss_pred CcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 333 IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 333 iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+||.++||| +.+.+.++. ++|+|++.+|+.....|++
T Consensus 230 ~~i~AsGGI-~~~ni~~~~-~aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 230 VLLEASGNI-SLESINAYA-KSGVDAISVGALIHQATFI 266 (273)
T ss_dssp CEEEEESSC-CTTTHHHHH-TTTCSEEECTHHHHTCCCC
T ss_pred cEEEEECCC-CHHHHHHHH-HcCCcEEEEcHHhcCCCCC
Confidence 899999999 889999998 8999999999987766654
No 279
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.79 E-value=0.071 Score=52.37 Aligned_cols=149 Identities=14% Similarity=0.079 Sum_probs=93.5
Q ss_pred CCCCCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCcc--ccccCChHHHHHHHHHHhhhc-cCcE
Q psy7343 201 PEDRPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYG--AYLQDDWPLLTNLVSSLRQAV-QVPV 274 (487)
Q Consensus 201 ~~~~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G--~~l~~d~~~i~eiv~~v~~~~-~iPV 274 (487)
..+.||++-+- | .++++..+.++.+.++ +.+|.|--+.- ..+.|..| +.-+...+...+-+++++++. ..++
T Consensus 73 ~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~--~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~ 150 (290)
T 2hjp_A 73 TVSIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTF--PKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDF 150 (290)
T ss_dssp TCSSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCS--SCCC-------CCBCCHHHHHHHHHHHHHHCSSTTS
T ss_pred cCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCC--CccccccccCCCcccCHHHHHHHHHHHHHhcccCCc
Confidence 34689888764 3 3788888888776666 78888876641 12223333 222234444344444454442 3456
Q ss_pred EEEeecccc-----cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC--CcEEEc---CCCCCH
Q psy7343 275 SCKIRIYQD-----VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT--IPVIAN---GNIQCL 344 (487)
Q Consensus 275 ~vKiR~~~d-----~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~--iPVi~n---GgI~s~ 344 (487)
.++.|.... .++..+-++.++++|+|.|.++++. .+.+.++++.+.++ +|+++| +...+.
T Consensus 151 ~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~----------~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~ 220 (290)
T 2hjp_A 151 VVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQ----------KTPDEILAFVKSWPGKVPLVLVPTAYPQLTE 220 (290)
T ss_dssp EEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCC----------SSSHHHHHHHHHCCCSSCEEECGGGCTTSCH
T ss_pred EEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCC----------CCHHHHHHHHHHcCCCCCEEEeccCCCCCCH
Confidence 666665322 3567777889999999999996642 34567889999998 999987 323343
Q ss_pred HHHHHHHHhcC-CcEEEecccc
Q psy7343 345 ADVEACLAQTG-VAGVMTAEGN 365 (487)
Q Consensus 345 ~da~~~l~~~G-ad~VmiGRa~ 365 (487)
.++- +.| +..|..|-.+
T Consensus 221 ---~eL~-~lG~v~~v~~~~~~ 238 (290)
T 2hjp_A 221 ---ADIA-ALSKVGIVIYGNHA 238 (290)
T ss_dssp ---HHHH-TCTTEEEEEECSHH
T ss_pred ---HHHH-hcCCeeEEEechHH
Confidence 3444 789 9999988543
No 280
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.79 E-value=0.03 Score=55.19 Aligned_cols=146 Identities=16% Similarity=0.150 Sum_probs=91.0
Q ss_pred CCCCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCcc---ccccCChHHHHHHHHHHhhhc-cCcE
Q psy7343 202 EDRPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYG---AYLQDDWPLLTNLVSSLRQAV-QVPV 274 (487)
Q Consensus 202 ~~~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G---~~l~~d~~~i~eiv~~v~~~~-~iPV 274 (487)
.+.||++-+- | .++++..+.++.+.++ +.+|.|--+.. ..+.|..| ..+. ..+...+-+++++++. +.++
T Consensus 78 ~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~--~k~cgH~gg~~k~l~-p~~e~~~rI~Aa~~a~~~~~~ 154 (295)
T 1s2w_A 78 SDVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLF--PKTNSLHDGRAQPLA-DIEEFALKIKACKDSQTDPDF 154 (295)
T ss_dssp CSSCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC----------CTTCCBC-CHHHHHHHHHHHHHHCSSTTC
T ss_pred CCCCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCC--CccccccCCCCCccc-CHHHHHHHHHHHHHhcccCCc
Confidence 4689888875 3 3677777777766665 88888876642 12222223 2333 3443334444444443 4556
Q ss_pred EEEeecccc-----cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC--CcEEEcCC---CCCH
Q psy7343 275 SCKIRIYQD-----VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT--IPVIANGN---IQCL 344 (487)
Q Consensus 275 ~vKiR~~~d-----~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~--iPVi~nGg---I~s~ 344 (487)
.+..|.... .++..+-++.++++|+|.|.+++. .++.+.++++.+.++ +|+++|-+ -.+
T Consensus 155 ~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~----------~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~- 223 (295)
T 1s2w_A 155 CIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSK----------KADPSDIEAFMKAWNNQGPVVIVPTKYYKTP- 223 (295)
T ss_dssp EEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCC----------SSSSHHHHHHHHHHTTCSCEEECCSTTTTSC-
T ss_pred EEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCC----------CCCHHHHHHHHHHcCCCCCEEEeCCCCCCCC-
Confidence 666665322 256777888999999999999532 234577888888887 99999833 333
Q ss_pred HHHHHHHHhcCCcEEEeccc
Q psy7343 345 ADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 345 ~da~~~l~~~Gad~VmiGRa 364 (487)
..++- +.|+..|..|-.
T Consensus 224 --~~eL~-~lGv~~v~~~~~ 240 (295)
T 1s2w_A 224 --TDHFR-DMGVSMVIWANH 240 (295)
T ss_dssp --HHHHH-HHTCCEEEECSH
T ss_pred --HHHHH-HcCCcEEEEChH
Confidence 44444 689999998854
No 281
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.78 E-value=0.02 Score=56.70 Aligned_cols=144 Identities=15% Similarity=0.119 Sum_probs=88.1
Q ss_pred CCCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhh---ccCcEEE
Q psy7343 203 DRPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA---VQVPVSC 276 (487)
Q Consensus 203 ~~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~---~~iPV~v 276 (487)
+.||++-+- | .++++..+.++.++++ +.+|.|--....+ +.|..++.-+.+.+...+-+++.+++ .+.++.+
T Consensus 88 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k--~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I 165 (307)
T 3lye_A 88 GPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTK--RCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVL 165 (307)
T ss_dssp SCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC----------CBCCHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCc--ccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 589998875 3 3678888888877665 7888776443111 22222222223444433334444433 3667888
Q ss_pred Eeecc----cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC-CcEEEc---CC---CCCHH
Q psy7343 277 KIRIY----QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT-IPVIAN---GN---IQCLA 345 (487)
Q Consensus 277 KiR~~----~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~-iPVi~n---Gg---I~s~~ 345 (487)
+.|.. .+.++..+-++...++|+|.|.++|. .+.+.++++.+.++ +|+.+| |+ ..+.
T Consensus 166 ~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~-----------~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~- 233 (307)
T 3lye_A 166 IARTDALQSLGYEECIERLRAARDEGADVGLLEGF-----------RSKEQAAAAVAALAPWPLLLNSVENGHSPLITV- 233 (307)
T ss_dssp EEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCC-----------SCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCH-
T ss_pred EEechhhhccCHHHHHHHHHHHHHCCCCEEEecCC-----------CCHHHHHHHHHHccCCceeEEeecCCCCCCCCH-
Confidence 88763 23446777778888999999999643 34577888888874 898765 33 2343
Q ss_pred HHHHHHHhcCCcEEEecc
Q psy7343 346 DVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 346 da~~~l~~~Gad~VmiGR 363 (487)
.++- +.|+..|..+-
T Consensus 234 --~eL~-~lGv~~v~~~~ 248 (307)
T 3lye_A 234 --EEAK-AMGFRIMIFSF 248 (307)
T ss_dssp --HHHH-HHTCSEEEEET
T ss_pred --HHHH-HcCCeEEEECh
Confidence 3343 67998887664
No 282
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=96.66 E-value=0.0068 Score=61.28 Aligned_cols=114 Identities=15% Similarity=0.161 Sum_probs=73.3
Q ss_pred cCCCCCCeeeeec-------cCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc
Q psy7343 199 STPEDRPLIIQFC-------GNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV 270 (487)
Q Consensus 199 ~~~~~~Pv~Vqi~-------g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~ 270 (487)
....+.||+|+|. |.+.+++.++++.+++. .|.|++..|.-....... .+. ..++ ++++.+++.+
T Consensus 215 avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~-~~~--~~~~----~~~~~ir~~~ 287 (349)
T 3hgj_A 215 VVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIP-LAP--GFQV----PFADAVRKRV 287 (349)
T ss_dssp HSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCC-CCT--TTTH----HHHHHHHHHH
T ss_pred HhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccC-CCc--cccH----HHHHHHHHHc
Confidence 3456789999997 35688899999988876 899999865311100000 000 0123 3455577777
Q ss_pred cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC
Q psy7343 271 QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT 332 (487)
Q Consensus 271 ~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~ 332 (487)
++||++.+ .+.+..++.+.+++..+|.|++ ||..-. +-+++.++++.++
T Consensus 288 ~iPVi~~G----gi~t~e~a~~~l~~G~aD~V~i-GR~~la--------nPdl~~k~~~~l~ 336 (349)
T 3hgj_A 288 GLRTGAVG----LITTPEQAETLLQAGSADLVLL-GRVLLR--------DPYFPLRAAKALG 336 (349)
T ss_dssp CCEEEECS----SCCCHHHHHHHHHTTSCSEEEE-STHHHH--------CTTHHHHHHHHTT
T ss_pred CceEEEEC----CCCCHHHHHHHHHCCCceEEEe-cHHHHh--------CchHHHHHHHHCC
Confidence 99999997 5556667666666655999999 885321 2234666666553
No 283
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=96.65 E-value=0.0079 Score=59.96 Aligned_cols=121 Identities=12% Similarity=0.116 Sum_probs=83.8
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+- .+..+..+.+
T Consensus 31 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~~ai~la 99 (316)
T 3e96_A 31 DWHHYKETVDRIVDN--------GI-DVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATSTAIELG 99 (316)
T ss_dssp CHHHHHHHHHHHHTT--------TC-CEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHHHHHHHH
Confidence 667778877766555 44 4455666677665445666677777776655 589999873 3666888999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCC---CCHHHHHHHHhhCCCcEE-Ec-CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGL---ASWEHITAVRKALTIPVI-AN-GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~---~~~~~i~~i~~~~~iPVi-~n-GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+ ..++.++.|.+.+++||+ +| |--.+++.+.++.
T Consensus 100 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La 158 (316)
T 3e96_A 100 NAAKAAGADAVMIHMP------IHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLA 158 (316)
T ss_dssp HHHHHHTCSEEEECCC------CCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHT
T ss_pred HHHHhcCCCEEEEcCC------CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH
Confidence 9999999999999321 12221 134777888888899986 66 6556777777665
No 284
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=96.64 E-value=0.016 Score=57.58 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=94.0
Q ss_pred CCCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCcc-ccccCChHHHHHHHHHHhhhc-cCcEEEE
Q psy7343 203 DRPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYG-AYLQDDWPLLTNLVSSLRQAV-QVPVSCK 277 (487)
Q Consensus 203 ~~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G-~~l~~d~~~i~eiv~~v~~~~-~iPV~vK 277 (487)
+.||++-+- | .++++..+.++.+.++ +.+|.|--+.. ..+.|..+ ..+. ..+...+-+++++++. +.++.+.
T Consensus 101 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~--~k~cgH~~gk~L~-p~~e~~~rI~Aa~~A~~~~~~~I~ 177 (318)
T 1zlp_A 101 NLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVW--PKKCGHMRGKAVV-PAEEHALKIAAAREAIGDSDFFLV 177 (318)
T ss_dssp SSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCS--SCCCSSSSCCCBC-CHHHHHHHHHHHHHHHTTSCCEEE
T ss_pred CCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCC--CccccCCCCCccC-CHHHHHHHHHHHHHhcccCCcEEE
Confidence 589998875 3 2788888887766666 78888876542 22233333 3343 3444444444555443 3456666
Q ss_pred eeccc----ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEc---CC---CCCHHHH
Q psy7343 278 IRIYQ----DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIAN---GN---IQCLADV 347 (487)
Q Consensus 278 iR~~~----d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~n---Gg---I~s~~da 347 (487)
.|... +.++..+-++.++++|+|.|.+++. .+.+.++++.+.+++|+.+| || ..+ .
T Consensus 178 ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~-----------~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~---~ 243 (318)
T 1zlp_A 178 ARTDARAPHGLEEGIRRANLYKEAGADATFVEAP-----------ANVDELKEVSAKTKGLRIANMIEGGKTPLHT---P 243 (318)
T ss_dssp EEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC-----------CSHHHHHHHHHHSCSEEEEEECTTSSSCCCC---H
T ss_pred EeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC-----------CCHHHHHHHHHhcCCCEEEEeccCCCCCCCC---H
Confidence 66532 1246777788999999999999542 35678999999999999765 32 334 3
Q ss_pred HHHHHhcCCcEEEecccc
Q psy7343 348 EACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 348 ~~~l~~~Gad~VmiGRa~ 365 (487)
.++- +.|+..|..|-.+
T Consensus 244 ~eL~-~lGv~~v~~~~~~ 260 (318)
T 1zlp_A 244 EEFK-EMGFHLIAHSLTA 260 (318)
T ss_dssp HHHH-HHTCCEEEECSHH
T ss_pred HHHH-HcCCeEEEEchHH
Confidence 3444 6899999988543
No 285
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.63 E-value=0.026 Score=58.00 Aligned_cols=90 Identities=14% Similarity=0.176 Sum_probs=52.3
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcce--ee-ccCccccccCChHHHHHHHHHHhhhccCcEEEEe
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMV--AK-RGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI 278 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i--~~-~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi 278 (487)
+.||++.- ..+. +.++.+++. +|+|.+..+ |-.+ +. .+..| ..+++.+.++.+ +.+..++||++.+
T Consensus 194 ~~pviv~~-v~~~----~~a~~a~~~Gad~I~vg~~-~G~~~~~~~~~~~g---~p~~~~l~~v~~-~~~~~~ipVia~G 263 (404)
T 1eep_A 194 NLDLIAGN-IVTK----EAALDLISVGADCLKVGIG-PGSICTTRIVAGVG---VPQITAICDVYE-ACNNTNICIIADG 263 (404)
T ss_dssp TCEEEEEE-ECSH----HHHHHHHTTTCSEEEECSS-CSTTSHHHHHHCCC---CCHHHHHHHHHH-HHTTSSCEEEEES
T ss_pred CCeEEEcC-CCcH----HHHHHHHhcCCCEEEECCC-CCcCcCccccCCCC---cchHHHHHHHHH-HHhhcCceEEEEC
Confidence 57888731 1233 334444444 888888322 1110 00 01111 123445555444 3334689999997
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.+.+..++.+.+. .|+|+|++ ||.
T Consensus 264 ----GI~~~~d~~~ala-~GAd~V~i-G~~ 287 (404)
T 1eep_A 264 ----GIRFSGDVVKAIA-AGADSVMI-GNL 287 (404)
T ss_dssp ----CCCSHHHHHHHHH-HTCSEEEE-CHH
T ss_pred ----CCCCHHHHHHHHH-cCCCHHhh-CHH
Confidence 6778888888886 79999999 875
No 286
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=96.61 E-value=0.025 Score=52.57 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=53.0
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC-CcEEEcCCCCCH-HHHHHHHHhcCCcEEEecc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT-IPVIANGNIQCL-ADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~-iPVi~nGgI~s~-~da~~~l~~~Gad~VmiGR 363 (487)
.....+++..+.|++++.+.+. ..+.++++++..+ .+++..|||+.. .++.+++ +.|+|.+.+||
T Consensus 120 ~v~~~~~~a~~~G~~G~~~~~~------------~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~-~aGad~vvvGr 186 (208)
T 2czd_A 120 LTDRFIEVANEIEPFGVIAPGT------------RPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAV-KAGADYIIVGR 186 (208)
T ss_dssp GHHHHHHHHHHHCCSEEECCCS------------STHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHH-HHTCSEEEECH
T ss_pred HHHHHHHHHHHhCCcEEEECCC------------ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHH-HcCCCEEEECh
Confidence 3556678888999999977211 2355777777765 367799999863 3788888 67999999999
Q ss_pred ccccCc
Q psy7343 364 GNLYNP 369 (487)
Q Consensus 364 a~l~~P 369 (487)
+++..+
T Consensus 187 ~I~~a~ 192 (208)
T 2czd_A 187 AIYNAP 192 (208)
T ss_dssp HHHTSS
T ss_pred HHhcCC
Confidence 988754
No 287
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=96.60 E-value=0.017 Score=60.27 Aligned_cols=125 Identities=13% Similarity=0.112 Sum_probs=92.2
Q ss_pred cCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 212 GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 212 g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
+.+++++.+.++.. ++.+..+.++.|+ +++.-.+.++++++++ ++++.+...-+++..+..
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~ 262 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAV 262 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 45788888766644 4457777776554 3444455677788776 456666655567777888
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh---CCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA---LTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~---~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
++++.+++.++..|- | + . .+.+++..+++++. +++||.+.-.+.+..++.++++...+|.+++-
T Consensus 263 ~~~~~L~~~~~~~iE-------e-P-~-~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d 329 (441)
T 4a35_A 263 EWMSKLAKFKPLWIE-------E-P-T-SPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQID 329 (441)
T ss_dssp HHHHHHGGGCCSEEE-------C-C-S-CTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHhhcccCccEEe-------C-C-C-CcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEEC
Confidence 999999999988773 2 1 1 23578888899887 78999999999999999999977778888653
No 288
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.60 E-value=0.0058 Score=57.66 Aligned_cols=106 Identities=15% Similarity=0.194 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCC---CCCCCCCH-HHHHHHHhhC-
Q psy7343 257 PLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRG---MNTGLASW-EHITAVRKAL- 331 (487)
Q Consensus 257 ~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g---~~~g~~~~-~~i~~i~~~~- 331 (487)
+.+.+.++..++. ++.+++-+ . +..+ .+.+.+.|.+.|-++.|.....| ....+... +..+.+++..
T Consensus 98 ~e~~~~~~~a~~~-Gl~~iv~v----~--~~~e-~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~ 169 (219)
T 2h6r_A 98 ADIEAVINKCKNL-GLETIVCT----N--NINT-SKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINK 169 (219)
T ss_dssp HHHHHHHHHHHHH-TCEEEEEE----S--SSHH-HHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHC-CCeEEEEe----C--CchH-HHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccC
Confidence 3466666665543 66666654 1 1222 24456678888888776542222 01111112 3444455544
Q ss_pred CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 332 TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 332 ~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++||++.|||++.+++..+. ..|+|+|.||++++.-++.
T Consensus 170 ~~~ii~ggGI~~~~~~~~~~-~~gaDgvlVGsAi~~~~d~ 208 (219)
T 2h6r_A 170 DVKVLCGAGISKGEDVKAAL-DLGAEGVLLASGVVKAKNV 208 (219)
T ss_dssp TCEEEECSSCCSHHHHHHHH-TTTCCCEEESHHHHTCSSH
T ss_pred CCeEEEEeCcCcHHHHHHHh-hCCCCEEEEcHHHhCcccH
Confidence 79999999999999999987 7899999999999876554
No 289
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=96.59 E-value=0.0062 Score=62.95 Aligned_cols=98 Identities=12% Similarity=0.171 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCC
Q psy7343 256 WPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTI 333 (487)
Q Consensus 256 ~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~i 333 (487)
.+...+.++++|+++ ++++.+..--+++.++..++++.+++.|++.|-- + ...+.+++..+++++.+++
T Consensus 196 ~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P-~~~~~~~~~~~~l~~~~~i 266 (410)
T 3dip_A 196 LKDGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVLWVED--------P-IAKMDNIPAVADLRRQTRA 266 (410)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEEC--------C-BSCTTCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------C-CCCcccHHHHHHHHhhCCC
Confidence 456677888898887 4677775544677788889999999999998852 1 0122378889999999999
Q ss_pred cEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 334 PVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 334 PVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
||.+.+.+.+.+++.++++...+|.|++=
T Consensus 267 PIa~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 267 PICGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp CEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CEEecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 99999999999999999977778998864
No 290
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=96.55 E-value=0.0046 Score=62.19 Aligned_cols=111 Identities=16% Similarity=0.162 Sum_probs=71.3
Q ss_pred hhcChhHHHHHHhc--CCCCCCeeeeecc-------CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCC
Q psy7343 186 FIADKKLRQEILMS--TPEDRPLIIQFCG-------NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDD 255 (487)
Q Consensus 186 Ll~~~~~~~~~l~~--~~~~~Pv~Vqi~g-------~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d 255 (487)
+.++.+...++++. ...+.||+|+|.. .+.++..++++.+++. .|.|++..|.... .... .+. ..+
T Consensus 190 lenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~-~~~~-~~~--~~~ 265 (338)
T 1z41_A 190 PENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH-ADIN-VFP--GYQ 265 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC-CCCC-CCT--TTT
T ss_pred hhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-CCCC-CCc--cch
Confidence 33444444555531 1127899999864 4677888999988876 8999988664110 0000 010 012
Q ss_pred hHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 256 WPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 256 ~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
++ +++.+++.+++||++++ ++.+..++.+.+++.++|.|++ ||..
T Consensus 266 ~~----~~~~ir~~~~iPVi~~G----gi~s~~~a~~~l~~G~aD~V~i-GR~~ 310 (338)
T 1z41_A 266 VS----FAEKIREQADMATGAVG----MITDGSMAEEILQNGRADLIFI-GREL 310 (338)
T ss_dssp HH----HHHHHHHHHCCEEEECS----SCCSHHHHHHHHHTTSCSEEEE-CHHH
T ss_pred HH----HHHHHHHHCCCCEEEEC----CCCCHHHHHHHHHcCCceEEee-cHHH
Confidence 33 44556777799999997 5667777777777666999999 8853
No 291
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.54 E-value=0.016 Score=56.97 Aligned_cols=123 Identities=15% Similarity=0.181 Sum_probs=84.4
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 19 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~la 88 (292)
T 2vc6_A 19 DEVALHDLVEWQIEE--------GS-FGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS-NSTAEAIAFV 88 (292)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHHHHHH
Confidence 667777777766555 44 4455666677765445666677777776655 5899987621 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE------cCCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA------NGNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~------nGgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|..+. ..+.++.|.+.+++||+. .|--.+++.+.++.+
T Consensus 89 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 89 RHAQNAGADGVLIVSP------YYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHHHHTTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCC------CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 9999999999999432 122221 246777888889999876 465568888888874
No 292
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.53 E-value=0.014 Score=56.25 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=72.1
Q ss_pred HHhhhccCcEEEEeec-cc------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEE
Q psy7343 265 SLRQAVQVPVSCKIRI-YQ------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIA 337 (487)
Q Consensus 265 ~v~~~~~iPV~vKiR~-~~------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~ 337 (487)
++++. +++|++-+.- .+ + .+..++++.+++.|+++|.|- |.. +.+.| ..+.++.+++.+++||..
T Consensus 40 al~~~-~~~~IaE~k~aSPskg~i~~-~~p~~~A~~~~~~GA~~isvl--t~~--~~f~G--~~~~l~~i~~~v~lPvl~ 111 (254)
T 1vc4_A 40 ALLRP-GLSVIAEVKRQSPSEGLIRE-VDPVEAALAYARGGARAVSVL--TEP--HRFGG--SLLDLKRVREAVDLPLLR 111 (254)
T ss_dssp HHTSS-SCEEEEEECSCCTTTCCCCS-CCHHHHHHHHHHTTCSEEEEE--CCC--SSSCC--CHHHHHHHHHHCCSCEEE
T ss_pred HHhhc-CCcEEeeecCCCcCCCcCCC-CCHHHHHHHHHHcCCCEEEEe--cch--hhhcc--CHHHHHHHHHhcCCCEEE
Confidence 44433 5778885431 11 3 578999999999999999982 111 12333 467889999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 338 NGNIQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 338 nGgI~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
-+.|.+..++.+++ ..|||+|.++...+.
T Consensus 112 kdfI~d~~qi~~a~-~~GAD~VlL~~~~l~ 140 (254)
T 1vc4_A 112 KDFVVDPFMLEEAR-AFGASAALLIVALLG 140 (254)
T ss_dssp ESCCCSHHHHHHHH-HTTCSEEEEEHHHHG
T ss_pred CCcCCCHHHHHHHH-HcCCCEEEECccchH
Confidence 99999999998888 799999999998775
No 293
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.52 E-value=0.011 Score=55.68 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=93.9
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcc---e-eeccCc-----cccccCChHHH-------------
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQM---V-AKRGHY-----GAYLQDDWPLL------------- 259 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~---i-~~~gr~-----G~~l~~d~~~i------------- 259 (487)
..|++.=+++.++++....++.+.+. .+.||+.+-.|.. + ..+..+ |+.-.-+.+.+
T Consensus 12 ~~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs 91 (217)
T 3lab_A 12 TKPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS 91 (217)
T ss_dssp SCSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE
T ss_pred hCCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe
Confidence 46888888998999998888877665 8888887655431 0 000000 10001123332
Q ss_pred ----HHHHHHHhhhccC------cEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHh
Q psy7343 260 ----TNLVSSLRQAVQV------PVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRK 329 (487)
Q Consensus 260 ----~eiv~~v~~~~~i------PV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~ 329 (487)
.++++..++ .++ |++-- ..+..|+. ...++|+|.|-+..- + ..| ..++++.++.
T Consensus 92 P~~~~evi~~~~~-~~v~~~~~~~~~PG------~~TptE~~-~A~~~Gad~vK~FPa---~---~~g--G~~~lkal~~ 155 (217)
T 3lab_A 92 PGLTPELIEKAKQ-VKLDGQWQGVFLPG------VATASEVM-IAAQAGITQLKCFPA---S---AIG--GAKLLKAWSG 155 (217)
T ss_dssp SSCCHHHHHHHHH-HHHHCSCCCEEEEE------ECSHHHHH-HHHHTTCCEEEETTT---T---TTT--HHHHHHHHHT
T ss_pred CCCcHHHHHHHHH-cCCCccCCCeEeCC------CCCHHHHH-HHHHcCCCEEEECcc---c---ccc--CHHHHHHHHh
Confidence 233333332 245 55543 33445544 456789999988321 1 111 2578999998
Q ss_pred hC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccccc
Q psy7343 330 AL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 330 ~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~ 373 (487)
.+ ++|++..|||+ .+.+.+.+ ..|+..+..| ..+..+.+..
T Consensus 156 p~p~i~~~ptGGI~-~~N~~~~l-~aGa~~~vgG-s~l~~~~~i~ 197 (217)
T 3lab_A 156 PFPDIQFCPTGGIS-KDNYKEYL-GLPNVICAGG-SWLTESKLLI 197 (217)
T ss_dssp TCTTCEEEEBSSCC-TTTHHHHH-HSTTBCCEEE-SGGGCHHHHH
T ss_pred hhcCceEEEeCCCC-HHHHHHHH-HCCCEEEEEC-hhhcChhHHh
Confidence 77 79999999998 78999999 6888877555 5566665544
No 294
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.51 E-value=0.012 Score=57.24 Aligned_cols=77 Identities=18% Similarity=0.145 Sum_probs=63.7
Q ss_pred cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 284 VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
..+..++++.+++.|+++|.|-. . .+.+.| ..+.++++++.+++||+..+.|.+..++.++. ..|||+|.++-
T Consensus 78 ~~dp~~~A~~y~~~GA~~IsVlt--d--~~~f~G--s~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~-~~GAD~VlLi~ 150 (272)
T 3tsm_A 78 DFDPPALAKAYEEGGAACLSVLT--D--TPSFQG--APEFLTAARQACSLPALRKDFLFDPYQVYEAR-SWGADCILIIM 150 (272)
T ss_dssp SCCHHHHHHHHHHTTCSEEEEEC--C--STTTCC--CHHHHHHHHHTSSSCEEEESCCCSTHHHHHHH-HTTCSEEEEET
T ss_pred CCCHHHHHHHHHHCCCCEEEEec--c--ccccCC--CHHHHHHHHHhcCCCEEECCccCCHHHHHHHH-HcCCCEEEEcc
Confidence 34789999999999999998832 1 122333 57889999999999999999999999999988 79999999998
Q ss_pred cccc
Q psy7343 364 GNLY 367 (487)
Q Consensus 364 a~l~ 367 (487)
..+.
T Consensus 151 a~L~ 154 (272)
T 3tsm_A 151 ASVD 154 (272)
T ss_dssp TTSC
T ss_pred cccC
Confidence 7663
No 295
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.48 E-value=0.0049 Score=58.92 Aligned_cols=133 Identities=8% Similarity=0.018 Sum_probs=79.7
Q ss_pred eeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--------cCcEEEEe
Q psy7343 207 IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--------QVPVSCKI 278 (487)
Q Consensus 207 ~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--------~iPV~vKi 278 (487)
-+.+..++++.+.+.+..+ .+|+| +.|.... +.+.+.++.+++.. +..+.+-+
T Consensus 73 DvhLMv~~p~~~i~~~~~a--GAd~i----------tvH~ea~-------~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l 133 (237)
T 3cu2_A 73 DVHLMVRNQLEVAKAVVAN--GANLV----------TLQLEQY-------HDFALTIEWLAKQKTTYANQVYPVLIGACL 133 (237)
T ss_dssp EEEEECSCHHHHHHHHHHT--TCSEE----------EEETTCT-------TSHHHHHHHHTTCEEEETTEEEECEEEEEE
T ss_pred CeEEEEECHHHHHHHHHHc--CCCEE----------EEecCCc-------ccHHHHHHHHHhcccccccccCCceEEEEE
Confidence 6777767887777655433 23444 4444311 12445666666541 33344443
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEE---EccccCCCCCCCCCCCHHHHHHHHhhC-----CCcEEEcCCCCCHHHHHHH
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAV---HGRTVDQRGMNTGLASWEHITAVRKAL-----TIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~V---hgRt~~~~g~~~g~~~~~~i~~i~~~~-----~iPVi~nGgI~s~~da~~~ 350 (487)
+..+..+..+.+. .++|.|.+ ++....|. + .+...+.++++++.. ++||.+.|||+ .+.+.++
T Consensus 134 ----~p~Tp~~~l~~~l-~~~D~vlvMsv~pgfggq~--f-~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~ 204 (237)
T 3cu2_A 134 ----CPETPISELEPYL-DQIDVIQLLTLDPRNGTKY--P-SELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYF 204 (237)
T ss_dssp ----CTTSCGGGGTTTT-TTCSEEEEESEETTTTEEC--C-HHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHH
T ss_pred ----eCCChHHHHHHHh-hcCceeeeeeeccCcCCee--c-ChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHH
Confidence 2223333333222 26998866 44433222 1 122357777777765 68999999997 7888888
Q ss_pred HHh--cCCcEEEeccccccC
Q psy7343 351 LAQ--TGVAGVMTAEGNLYN 368 (487)
Q Consensus 351 l~~--~Gad~VmiGRa~l~~ 368 (487)
. + .|||++.+|++++..
T Consensus 205 ~-~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 205 K-QGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp H-HSSSCCCCEEECGGGGSS
T ss_pred H-HhCCCCcEEEEeeHHhCC
Confidence 8 7 899999999998764
No 296
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.45 E-value=0.0052 Score=60.83 Aligned_cols=91 Identities=22% Similarity=0.242 Sum_probs=61.4
Q ss_pred HHHHHHHhhhcc--CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-----C
Q psy7343 260 TNLVSSLRQAVQ--VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-----T 332 (487)
Q Consensus 260 ~eiv~~v~~~~~--iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-----~ 332 (487)
.+-++++++..+ .++.+-. ++..+ ++...+.|+|+|+++.- ..+.++++++.+ +
T Consensus 184 ~~ai~~~r~~~~~~~~i~vev------~tlee-~~~A~~aGaD~I~ld~~------------~~~~l~~~v~~l~~~~~~ 244 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEVEC------SSLQE-AVQAAEAGADLVLLDNF------------KPEELHPTATVLKAQFPS 244 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEEEE------SSHHH-HHHHHHTTCSEEEEESC------------CHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCCcCCeEEEec------CCHHH-HHHHHHcCCCEEEECCC------------CHHHHHHHHHHhhccCCC
Confidence 344555555553 4566644 23444 44444689999999431 234455444433 4
Q ss_pred CcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 333 IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 333 iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+||.++||| |.+.+.++. ++|+|++.+|+.....|++
T Consensus 245 ~~I~ASGGI-t~~ni~~~~-~aGaD~i~vGs~i~~a~~~ 281 (299)
T 2jbm_A 245 VAVEASGGI-TLDNLPQFC-GPHIDVISMGMLTQAAPAL 281 (299)
T ss_dssp SEEEEESSC-CTTTHHHHC-CTTCCEEECTHHHHSCCCC
T ss_pred eeEEEECCC-CHHHHHHHH-HCCCCEEEEChhhcCCCCc
Confidence 899999999 899999998 8999999999976655655
No 297
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.44 E-value=0.087 Score=48.97 Aligned_cols=192 Identities=13% Similarity=0.060 Sum_probs=107.8
Q ss_pred cCCCchHHHHHHHHhCCccceeccccchhhhcChhHHHHHHhcCCCCCCeeeeec-cCCHHHHHHHHHhhCCcCcEEEee
Q psy7343 157 VDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC-GNDSKNLTEAAKLAEPHCDGIDIN 235 (487)
Q Consensus 157 a~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~~d~IdiN 235 (487)
.|+++..=...+.+.|++.+---+...+.=.-+++...++....+.. ...|-++ ..++++..+.++.+. .|.|+||
T Consensus 6 CGit~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~-~~~VgVfvn~~~~~i~~~~~~~~--ld~vQLH 82 (203)
T 1v5x_A 6 CGITRLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPF-VVRVGVFRDQPPEEVLRLMEEAR--LQVAQLH 82 (203)
T ss_dssp CCCCCHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSS-SEEEEEESSCCHHHHHHHHHHTT--CSEEEEC
T ss_pred cCCCcHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCC-CCEEEEEeCCCHHHHHHHHHhhC--CCEEEEC
Confidence 45565544456667888653211111111111344555565443322 2233334 456666666655442 4555555
Q ss_pred cCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCC
Q psy7343 236 IGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMN 315 (487)
Q Consensus 236 ~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~ 315 (487)
|. .+++.+.+ ++. ++|++--+++... .+. . +.++.+|++.+.... |+.
T Consensus 83 ----------G~------e~~~~~~~----l~~--~~~vika~~v~~~-~~l-~----~~~~~~d~~LlD~~~----gGt 130 (203)
T 1v5x_A 83 ----------GE------EPPEWAEA----VGR--FYPVIKAFPLEGP-ARP-E----WADYPAQALLLDGKR----PGS 130 (203)
T ss_dssp ----------SC------CCHHHHHH----HTT--TSCEEEEEECSSS-CCG-G----GGGSSCSEEEEECSS----TTS
T ss_pred ----------CC------CCHHHHHH----hcc--CCCEEEEEEcCCh-Hhh-h----hhhcCCCEEEEcCCC----CCC
Confidence 32 34555544 322 5788877766532 222 1 234448999996432 223
Q ss_pred CCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCcccccCCCCCcHHHHHHHHHHHHH
Q psy7343 316 TGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQ 392 (487)
Q Consensus 316 ~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf~~~~~~~~~~~~~~l~~~~~ 392 (487)
....+|+.++.+. ..+.|++.+||+ +++.+.+++ ..++.||-+.+|.-..|-. + ..+.++++++.++.
T Consensus 131 G~~fdW~~l~~~~-~~~~p~~LAGGL-~peNV~~ai-~~~p~gVDvsSGvE~~pG~----K--D~~ki~~fi~~~r~ 198 (203)
T 1v5x_A 131 GEAYPRAWAKPLL-ATGRRVILAGGI-APENLEEVL-ALRPYALDLASGVEEAPGV----K--SAEKLRALFARLAS 198 (203)
T ss_dssp CCCCCGGGGHHHH-HTTSCEEECSSC-CSTTHHHHH-HHCCSEEEESGGGEEETTE----E--CHHHHHHHHHHHHH
T ss_pred CCccCHHHHHhhh-ccCCcEEEECCC-CHHHHHHHH-hcCCCEEEeCCceecCCCC----c--CHHHHHHHHHHHHH
Confidence 3356898877632 246899999999 577887777 7899999999998865643 1 12445555555444
No 298
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=96.39 E-value=0.016 Score=56.83 Aligned_cols=91 Identities=20% Similarity=0.259 Sum_probs=61.2
Q ss_pred HHHHHHHhhhcc--CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcE
Q psy7343 260 TNLVSSLRQAVQ--VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPV 335 (487)
Q Consensus 260 ~eiv~~v~~~~~--iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPV 335 (487)
.+-++.+++..+ .+|.+.. ++..++ +.+.++|+|.|+++.- ..+.++++.+.+ ++|+
T Consensus 183 ~~av~~ar~~~~~~~~IgVev------~t~eea-~eA~~aGaD~I~ld~~------------~~~~~k~av~~v~~~ipi 243 (286)
T 1x1o_A 183 GEAVRRAKARAPHYLKVEVEV------RSLEEL-EEALEAGADLILLDNF------------PLEALREAVRRVGGRVPL 243 (286)
T ss_dssp HHHHHHHHHHSCTTSCEEEEE------SSHHHH-HHHHHHTCSEEEEESC------------CHHHHHHHHHHHTTSSCE
T ss_pred HHHHHHHHHhCCCCCEEEEEe------CCHHHH-HHHHHcCCCEEEECCC------------CHHHHHHHHHHhCCCCeE
Confidence 344555666553 3455543 344444 4455789999999432 223445544444 6999
Q ss_pred EEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 336 IANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 336 i~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
.++|||+ .+.+.++. ++|+|++.+|.....-|++
T Consensus 244 ~AsGGIt-~eni~~~a-~tGvD~IsVgs~~~~a~~~ 277 (286)
T 1x1o_A 244 EASGNMT-LERAKAAA-EAGVDYVSVGALTHSAKAL 277 (286)
T ss_dssp EEESSCC-HHHHHHHH-HHTCSEEECTHHHHSCCCC
T ss_pred EEEcCCC-HHHHHHHH-HcCCCEEEEcHHHcCCCce
Confidence 9999995 89999988 7999999999866665554
No 299
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.38 E-value=0.02 Score=56.65 Aligned_cols=123 Identities=18% Similarity=0.164 Sum_probs=84.2
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 34 D~~~l~~lv~~li~~--------Gv-~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la 103 (304)
T 3l21_A 34 DTATAARLANHLVDQ--------GC-DGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGT-YDTAHSIRLA 103 (304)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCC-CCHHHHHHHH
Confidence 677777777766555 44 4455556667655445666677777776655 5799987511 2456788999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEE-Ec-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVI-AN-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|..+. ..+.++.|.+++++||+ +| |--.+++.+.++.+
T Consensus 104 ~~a~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 167 (304)
T 3l21_A 104 KACAAEGAHGLLVVTP------YYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALAS 167 (304)
T ss_dssp HHHHHHTCSEEEEECC------CSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 9999999999999432 122221 24678888888999987 44 66678888888763
No 300
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=96.36 E-value=0.0072 Score=62.22 Aligned_cols=98 Identities=13% Similarity=0.085 Sum_probs=77.0
Q ss_pred ChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC
Q psy7343 255 DWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT 332 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~ 332 (487)
+++.-.+.++++++++ ++++.+..--+++..+..++++.+++.|++.|-- + . .+.+++..+++++.++
T Consensus 192 ~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P-~-~~~~~~~~~~l~~~~~ 261 (400)
T 4dxk_A 192 DLKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTFWHED--------P-I-KMDSLSSLTRYAAVSP 261 (400)
T ss_dssp HHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCSEEEC--------C-B-CTTSGGGHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCCEEEc--------C-C-CcccHHHHHHHHHhCC
Confidence 3555677788888887 4677775544677788889999999999998862 1 1 2236778899999999
Q ss_pred CcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 333 IPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 333 iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
+||.+.+.+.+..+++++++...+|.|++=
T Consensus 262 iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d 291 (400)
T 4dxk_A 262 APISASETLGSRWAFRDLLETGAAGVVMLD 291 (400)
T ss_dssp SCEEECTTCCHHHHHHHHHHTTCCCEEEEC
T ss_pred CCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999999999976678988753
No 301
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.35 E-value=0.021 Score=56.29 Aligned_cols=123 Identities=20% Similarity=0.206 Sum_probs=82.9
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 19 D~~~l~~lv~~li~~--------Gv-~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la 88 (297)
T 2rfg_A 19 DEKALAGLVDWQIKH--------GA-HGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS-NNPVEAVRYA 88 (297)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC-CCHHHHHHHH
Confidence 667777777765554 44 4455566677665445666667777776655 4899987621 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.+
T Consensus 89 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 89 QHAQQAGADAVLCVAG------YYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp HHHHHHTCSEEEECCC------TTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHhcCCCEEEEcCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 9999999999999321 132222 246777888889999864 4 55568888888763
No 302
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.34 E-value=0.028 Score=56.60 Aligned_cols=122 Identities=18% Similarity=0.120 Sum_probs=83.1
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++-+-- .+..+..+.+
T Consensus 50 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~la 119 (343)
T 2v9d_A 50 DKPGTAALIDDLIKA--------GV-DGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGG-TNARETIELS 119 (343)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCS-SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHH
Confidence 667777777766555 44 4556666677765445666677777777655 5899987621 2445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.
T Consensus 120 ~~A~~~Gadavlv~~P------~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 120 QHAQQAGADGIVVINP------YYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHTCSEEEEECC------SSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 9999999999999432 122221 246777888888999864 4 5446788888876
No 303
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=96.32 E-value=0.084 Score=52.05 Aligned_cols=148 Identities=16% Similarity=0.161 Sum_probs=90.1
Q ss_pred CCCCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCc-cccccCChHHHHHHHHHHhhh---ccCcE
Q psy7343 202 EDRPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHY-GAYLQDDWPLLTNLVSSLRQA---VQVPV 274 (487)
Q Consensus 202 ~~~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~-G~~l~~d~~~i~eiv~~v~~~---~~iPV 274 (487)
.+.||++-+- | .++++..+.++.++++ +.+|.|--....+ +.|.. |..+. +.+...+-+++.+++ .+.++
T Consensus 79 ~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~K--rcgh~~gk~l~-~~~e~~~rI~Aa~~A~~~~~~d~ 155 (302)
T 3fa4_A 79 PSTPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTK--RCGHLAGKILV-DTDTYVTRIRAAVQARQRIGSDI 155 (302)
T ss_dssp TTSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC---------CCCBC-CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCc--ccCCCCCCeec-CHHHHHHHHHHHHHHHHhcCCCE
Confidence 3789999875 3 3677888888877666 7888776443111 11222 22333 444433334444433 25778
Q ss_pred EEEeecc----cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEc---CCCCCHHH
Q psy7343 275 SCKIRIY----QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIAN---GNIQCLAD 346 (487)
Q Consensus 275 ~vKiR~~----~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~n---GgI~s~~d 346 (487)
.++-|.. .+.++..+-++...++|+|.|.++|- .+.+.++++.+.+ +.|+.+| |+-...-.
T Consensus 156 ~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~-----------~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~ 224 (302)
T 3fa4_A 156 VVIARTDSLQTHGYEESVARLRAARDAGADVGFLEGI-----------TSREMARQVIQDLAGWPLLLNMVEHGATPSIS 224 (302)
T ss_dssp EEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTC-----------CCHHHHHHHHHHTTTSCEEEECCTTSSSCCCC
T ss_pred EEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCC-----------CCHHHHHHHHHHhcCCceeEEEecCCCCCCCC
Confidence 8888763 23456677778888999999999553 2457788888888 5898876 22211112
Q ss_pred HHHHHHhcCCcEEEeccc
Q psy7343 347 VEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 347 a~~~l~~~Gad~VmiGRa 364 (487)
..++- +.|+..|..+-.
T Consensus 225 ~~eL~-~lGv~~v~~~~~ 241 (302)
T 3fa4_A 225 AAEAK-EMGFRIIIFPFA 241 (302)
T ss_dssp HHHHH-HHTCSEEEETTT
T ss_pred HHHHH-HcCCCEEEEchH
Confidence 33443 679988887743
No 304
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=96.32 E-value=0.038 Score=54.36 Aligned_cols=122 Identities=13% Similarity=0.114 Sum_probs=82.9
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 19 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la 88 (294)
T 2ehh_A 19 DYEALGNLIEFHVDN--------GT-DAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGG-NATHEAVHLT 88 (294)
T ss_dssp CHHHHHHHHHHHHTT--------TC-CEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHH
Confidence 777788877766555 44 4455566677665445666667777776655 4899887621 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.
T Consensus 89 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 89 AHAKEVGADGALVVVP------YYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHHTTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 9999999999999432 122221 246777888889999864 4 5456888888876
No 305
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.30 E-value=0.0059 Score=67.24 Aligned_cols=112 Identities=13% Similarity=0.122 Sum_probs=74.9
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeec-------cCCHHHHHHHHHhhCCcCcEEEeecCCCcce-eeccCcccccc
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFC-------GNDSKNLTEAAKLAEPHCDGIDINIGCPQMV-AKRGHYGAYLQ 253 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~-------g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i-~~~gr~G~~l~ 253 (487)
+.+......++++ ....+.||.++|. |.+.++..++++.+++..|.|+++.|. ... ....++.
T Consensus 203 ~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~~~d~~~v~~~~-~~~~~~~~~~~---- 277 (690)
T 3k30_A 203 LENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGELPDLWDFAMGS-WEGDSVTSRFA---- 277 (690)
T ss_dssp HHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTTSSSEEEEECSC-HHHHTCCTTTC----
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhhcCEEEEeccc-ccccCCCCccC----
Confidence 3444444555553 3345678999983 455788899999998888999999875 110 0001100
Q ss_pred CChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 254 DDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 254 ~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
......++++.+++.+++||++++ ++.+..+..+.+++.++|.|++ ||.
T Consensus 278 -~~~~~~~~~~~i~~~~~~pvi~~G----~i~~~~~a~~~l~~g~~d~v~~-gR~ 326 (690)
T 3k30_A 278 -PEGRQEEFVAGLKKLTTKPVVGVG----RFTSPDAMVRQIKAGILDLIGA-ARP 326 (690)
T ss_dssp -CTTTTHHHHTTSGGGCSSCEEECS----CCCCHHHHHHHHHTTSCSEEEE-SHH
T ss_pred -CccccHHHHHHHHHHcCCeEEEeC----CCCCHHHHHHHHHCCCcceEEE-cHH
Confidence 111113455668888999999998 5667777778888777999999 885
No 306
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.29 E-value=0.018 Score=57.32 Aligned_cols=120 Identities=15% Similarity=0.220 Sum_probs=81.6
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+ +.+..+..+.+
T Consensus 31 D~~~l~~lv~~li~~--------Gv-~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv--g~st~~ai~la 99 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQN--------GI-EVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI--GYSVDTAIELG 99 (314)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--CSSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC--CcCHHHHHHHH
Confidence 677777777766555 44 4455566677665445666677777776655 58999876 22455778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c--CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N--GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n--GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+++++||+. | |- .+++.+.++.
T Consensus 100 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~-l~~~~~~~La 158 (314)
T 3d0c_A 100 KSAIDSGADCVMIHQP------VHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH-LSDDVIKELA 158 (314)
T ss_dssp HHHHHTTCSEEEECCC------CCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTT-SCTHHHHHHT
T ss_pred HHHHHcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCC-cCHHHHHHHH
Confidence 9999999999999322 122222 246778888889999864 4 44 6677777765
No 307
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.28 E-value=0.029 Score=55.38 Aligned_cols=123 Identities=14% Similarity=0.157 Sum_probs=83.0
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 31 D~~~l~~lv~~li~~--------Gv-~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~-~~t~~ai~la 100 (301)
T 1xky_A 31 DFAKTTKLVNYLIDN--------GT-TAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS-NNTHASIDLT 100 (301)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC-CCHHHHHHHH
Confidence 667777777766555 44 4455556667665445666677777776655 5899987621 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.+
T Consensus 101 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (301)
T 1xky_A 101 KKATEVGVDAVMLVAP------YYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE 164 (301)
T ss_dssp HHHHHTTCSEEEEECC------CSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHhcCCCEEEEcCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 9999999999999432 122221 246778888889999864 4 54567888888763
No 308
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.28 E-value=0.026 Score=56.55 Aligned_cols=123 Identities=16% Similarity=0.133 Sum_probs=83.7
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+..-|.+|....-..+.-.++++.+.+.+ .+||++-+-- .+..+..+.+
T Consensus 53 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~la 122 (332)
T 2r8w_A 53 DIEAFSALIARLDAA--------EV-DSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGA-LRTDEAVALA 122 (332)
T ss_dssp CHHHHHHHHHHHHHH--------TC-SEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHH
Confidence 667777777766555 44 4455566677765445666677777777655 4899987621 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.+
T Consensus 123 ~~A~~~Gadavlv~~P------~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 123 KDAEAAGADALLLAPV------SYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAY 186 (332)
T ss_dssp HHHHHHTCSEEEECCC------CSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHT
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 9999999999999322 122221 246778888889999864 4 54568888888864
No 309
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.22 E-value=0.034 Score=55.04 Aligned_cols=122 Identities=15% Similarity=0.153 Sum_probs=82.7
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++-+-- .+..+..+.+
T Consensus 31 D~~~l~~lv~~li~~--------Gv-~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-~st~~ai~la 100 (306)
T 1o5k_A 31 DLESYERLVRYQLEN--------GV-NALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT-NSTEKTLKLV 100 (306)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCC-ccHHHHHHHH
Confidence 677777777766555 44 4455566677665445666667777776655 5899987611 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.
T Consensus 101 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 101 KQAEKLGANGVLVVTP------YYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHHHHTCSEEEEECC------CSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 9999999999999432 122221 246778888888999874 4 5446788888876
No 310
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.22 E-value=0.005 Score=60.80 Aligned_cols=92 Identities=16% Similarity=0.186 Sum_probs=50.7
Q ss_pred HHHHHHHHhhhcc--CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-----
Q psy7343 259 LTNLVSSLRQAVQ--VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL----- 331 (487)
Q Consensus 259 i~eiv~~v~~~~~--iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~----- 331 (487)
+.+-++++++..+ .++.+-. ++..++. ...++|+|+|+++.- + .+.++++++.+
T Consensus 185 i~~ai~~~r~~~~~~~~i~vev------~tlee~~-~A~~aGaD~I~ld~~---------~---~~~l~~~v~~l~~~~~ 245 (294)
T 3c2e_A 185 ITNAVKNARAVCGFAVKIEVEC------LSEDEAT-EAIEAGADVIMLDNF---------K---GDGLKMCAQSLKNKWN 245 (294)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEC------SSSHHHH-HHHHHTCSEEECCC------------------------------
T ss_pred HHHHHHHHHHhcCcCCeEEEec------CCHHHHH-HHHHcCCCEEEECCC---------C---HHHHHHHHHHhccccc
Confidence 3445555665553 4566643 2334433 344689999998421 1 23333333333
Q ss_pred ---CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 332 ---TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 332 ---~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++||.++||| |.+.+.++. ++|+|++.+|+.....|++
T Consensus 246 g~~~v~I~ASGGI-t~~ni~~~~-~~GvD~i~vGs~i~~a~~~ 286 (294)
T 3c2e_A 246 GKKHFLLECSGGL-NLDNLEEYL-CDDIDIYSTSSIHQGTPVI 286 (294)
T ss_dssp ---CCEEEEECCC-CC------C-CCSCSEEECGGGTSSCCCC
T ss_pred CCCCeEEEEECCC-CHHHHHHHH-HcCCCEEEEechhcCCCCC
Confidence 3899999999 889999998 8999999999987665654
No 311
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.21 E-value=0.036 Score=54.37 Aligned_cols=122 Identities=14% Similarity=0.139 Sum_probs=82.8
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-+.+.-.++++.+.+.+ .+||++-+-- .+..+..+.+
T Consensus 19 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~la 88 (289)
T 2yxg_A 19 DFDGLEENINFLIEN--------GV-SGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGS-NCTEEAIELS 88 (289)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHHHH
Confidence 677777777765555 44 4455556667665445666667777776655 4899887621 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.
T Consensus 89 ~~a~~~Gadavlv~~P------~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 89 VFAEDVGADAVLSITP------YYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHHHTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 9999999999999432 122221 246778888889999864 4 5556888888876
No 312
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=96.17 E-value=0.0091 Score=60.67 Aligned_cols=113 Identities=18% Similarity=0.169 Sum_probs=71.5
Q ss_pred CCCCCCeeeeecc--------CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc
Q psy7343 200 TPEDRPLIIQFCG--------NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV 270 (487)
Q Consensus 200 ~~~~~Pv~Vqi~g--------~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~ 270 (487)
...+.||.|+|.. .+.+++.++++.+++. .|.|++..|......... .+.. .+. ++++.+++.+
T Consensus 222 vg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~-~~~~--~~~----~~~~~ir~~~ 294 (363)
T 3l5l_A 222 WPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIP-WGPA--FMG----PIAERVRREA 294 (363)
T ss_dssp SCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCC-CCTT--TTH----HHHHHHHHHH
T ss_pred cCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccC-CCcc--hhH----HHHHHHHHHc
Confidence 3457899999873 3456778888888776 899999876411100000 0100 123 3455577778
Q ss_pred cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC
Q psy7343 271 QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT 332 (487)
Q Consensus 271 ~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~ 332 (487)
++||++.+ .+.+..++.+.+++.++|.|++ ||..-. +-+++.++++.++
T Consensus 295 ~iPVi~~G----gI~s~e~a~~~l~~G~aD~V~i-GR~~la--------nPdl~~k~~~~lg 343 (363)
T 3l5l_A 295 KLPVTSAW----GFGTPQLAEAALQANQLDLVSV-GRAHLA--------DPHWAYFAAKELG 343 (363)
T ss_dssp TCCEEECS----STTSHHHHHHHHHTTSCSEEEC-CHHHHH--------CTTHHHHHHHHTT
T ss_pred CCcEEEeC----CCCCHHHHHHHHHCCCccEEEe-cHHHHh--------CchHHHHHHHHcC
Confidence 99999997 5556667666776655999999 885321 2234666666654
No 313
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=96.10 E-value=0.037 Score=55.01 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=83.0
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 42 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~st~eai~la 111 (314)
T 3qze_A 42 DWDSLAKLVDFHLQE--------GT-NAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGA-NSTREAVALT 111 (314)
T ss_dssp CHHHHHHHHHHHHHH--------TC-CEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHHHHHH
Confidence 667777777766555 44 3455556667665445666667777666655 5899986511 2456788999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. ..+.++.|.+.+++||+. | |--.+++.+.++.
T Consensus 112 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 112 EAAKSGGADACLLVTP------YYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLS 174 (314)
T ss_dssp HHHHHTTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 9999999999999432 122221 347788888899999874 3 6667788887776
No 314
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.09 E-value=0.043 Score=54.60 Aligned_cols=121 Identities=22% Similarity=0.199 Sum_probs=82.3
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+..-|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 43 D~~~l~~lv~~li~~--------Gv-~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~~t~~ai~la 112 (315)
T 3na8_A 43 DLPALGRSIERLIDG--------GV-HAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSD-LTTAKTVRRA 112 (315)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHH
Confidence 667777777766554 44 4455556667665445666677777776655 5899986511 2456788999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEE-Ec-----CCCCCHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVI-AN-----GNIQCLADVEAC 350 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~da~~~ 350 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+ +| |--.+++.+.++
T Consensus 113 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 113 QFAESLGAEAVMVLPI------SYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHHHHTTCSEEEECCC------CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 9999999999999322 122221 34778888888999987 44 555678888877
No 315
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.09 E-value=0.01 Score=58.28 Aligned_cols=92 Identities=15% Similarity=0.187 Sum_probs=61.8
Q ss_pred HHHHHHHHhhhcc--CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-----
Q psy7343 259 LTNLVSSLRQAVQ--VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL----- 331 (487)
Q Consensus 259 i~eiv~~v~~~~~--iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~----- 331 (487)
+.+.++.+++..+ .+|.+-+ ++. +-++.+.++|+|.|+++.- ..+.++++.+.+
T Consensus 179 i~~av~~ar~~~~~~~~I~VEV------~tl-eea~eA~~aGaD~I~LDn~------------~~e~l~~av~~l~~~~~ 239 (285)
T 1o4u_A 179 AERAVQEVRKIIPFTTKIEVEV------ENL-EDALRAVEAGADIVMLDNL------------SPEEVKDISRRIKDINP 239 (285)
T ss_dssp HHHHHHHHHTTSCTTSCEEEEE------SSH-HHHHHHHHTTCSEEEEESC------------CHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhCCCCceEEEEe------CCH-HHHHHHHHcCCCEEEECCC------------CHHHHHHHHHHhhccCC
Confidence 3455666666553 4555543 344 4445556789999999542 223344433333
Q ss_pred CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 332 TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 332 ~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++|+.++|||+ .+.+.++. ++|+|++.+|.....-|++
T Consensus 240 ~v~ieASGGIt-~eni~~~a-~tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 240 NVIVEVSGGIT-EENVSLYD-FETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp TSEEEEEECCC-TTTGGGGC-CTTCCEEEEGGGTSSCCCC
T ss_pred CceEEEECCCC-HHHHHHHH-HcCCCEEEEeHHHcCCCCc
Confidence 78999999994 68888887 8999999999977766654
No 316
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.07 E-value=0.0083 Score=66.54 Aligned_cols=226 Identities=14% Similarity=0.048 Sum_probs=128.1
Q ss_pred hhcCCCceEEecCCCCC--CHHH------HHHHHHcCCCeEEccceecc--cccc--------CcH--HHHHHhh--hCC
Q psy7343 74 TQLGSPRFILAPMVDAS--ELPW------RLLSRRYGSHLCYTPMVSAH--QFIA--------DKK--LRQEILM--STP 131 (487)
Q Consensus 74 ~~~~~~~~~LAPMag~t--d~pF------R~l~~~~Gadl~~TEMi~a~--~l~~--------~~~--~~~~~~~--~~~ 131 (487)
.++ +|++++|||.+.. +.|+ +..+ +.|+++++||++... +... +.. ..++.+. .+.
T Consensus 18 ~~l-~NRiv~apm~~~~~~~~~~~~~~~y~~ra-~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~ 95 (729)
T 1o94_A 18 KTL-RNRFYQVPHCIGAGSDKPGFQSAHRSVKA-EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHK 95 (729)
T ss_dssp EEE-SSSEEECCCCCSCTTTCHHHHHHHHHHHH-HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHT
T ss_pred EEE-CCccEECCCcCCcCCCCcHHHHHHHHHHh-cCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHh
Confidence 455 7899999999863 4564 2233 468999999998775 2221 111 2333332 455
Q ss_pred CCCceeeeeccccCCCCC----ccccccccCC------------Cc-------hHHHHH---HHHhCCccc---------
Q psy7343 132 EDRPLIIQRTIFPRLGSP----RFILAPMVDA------------SE-------LPWRLL---SRRYGSHLC--------- 176 (487)
Q Consensus 132 ~e~p~~vQl~~~~~~g~~----~~~lApma~~------------td-------~~fr~i---~~~~Ga~l~--------- 176 (487)
.+.++++|+...+..... ...++|-+-- |. ..|... +.+.|.|..
T Consensus 96 ~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyL 175 (729)
T 1o94_A 96 YGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYL 175 (729)
T ss_dssp TTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCH
T ss_pred CCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchH
Confidence 678999998654321110 0112222110 00 124332 333454321
Q ss_pred ----eecccc------chhhhcChhHHHHHHh----cCCCCCCeeeeec--------cCC-HHHHHHHHHhhCCcCcEEE
Q psy7343 177 ----YTPMVS------AHQFIADKKLRQEILM----STPEDRPLIIQFC--------GND-SKNLTEAAKLAEPHCDGID 233 (487)
Q Consensus 177 ----~t~~v~------~~~Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~--------g~d-~~~~~~aa~~~~~~~d~Id 233 (487)
.+|..+ |..+.+......++++ ....+.||+++|. |.+ .++..++++.+++..|.|+
T Consensus 176 l~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~ 255 (729)
T 1o94_A 176 PLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWD 255 (729)
T ss_dssp HHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEE
T ss_pred HHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEE
Confidence 112221 2234444455555554 3455789999985 233 4677888898887789999
Q ss_pred eecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 234 INIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 234 iN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
++.|.-... ++..............++++.+++.+++||++++ ++.+..++.+.+++.++|.|++ ||.
T Consensus 256 v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G----~i~~~~~a~~~l~~g~aD~V~~-gR~ 323 (729)
T 1o94_A 256 ITIGDIAEW--GEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVG----RYTDPEKMIEIVTKGYADIIGC-ARP 323 (729)
T ss_dssp EEECCSTTG--GGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCS----CCCCHHHHHHHHHTTSCSBEEE-SHH
T ss_pred Eeeeccccc--ccccCCccccCccccHHHHHHHHHHCCCEEEEeC----CCCCHHHHHHHHHCCCCCEEEe-Cch
Confidence 988751110 0100110000111113455668888999999998 5557788888888877999999 874
No 317
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=96.06 E-value=0.039 Score=56.70 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=88.9
Q ss_pred HHHHHHHHH-hhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHH
Q psy7343 215 SKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 215 ~~~~~~aa~-~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a 291 (487)
++++.+.++ .+++ .+..+.+..| .+++.-.+.++++++.+ ++++.+...-+|+..+..+++
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~ 232 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAG 232 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHH
Confidence 466665544 4555 5666655544 13444556677777776 556666554467777888999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
+.+++.|+..|- | + .. +++..+++++.+++||.+...+.+..++.++++...+|.|++--
T Consensus 233 ~~l~~~~i~~iE-------q-P-~~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~ 292 (398)
T 4dye_A 233 IALEELDLEYLE-------D-P-CV---GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDV 292 (398)
T ss_dssp HHHGGGCCSEEE-------C-C-SS---HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECH
T ss_pred HHHhhcCCCEEc-------C-C-CC---CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCc
Confidence 999999998873 2 1 22 78899999999999999999999999999999777799988643
No 318
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=96.05 E-value=0.096 Score=51.64 Aligned_cols=124 Identities=15% Similarity=0.163 Sum_probs=84.4
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc---cCcEEEEeecccccccHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV---QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~---~iPV~vKiR~~~d~~~~~e~ 290 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.
T Consensus 26 D~~~l~~lv~~li~~--------Gv-~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~-~~t~~ai~l 95 (301)
T 3m5v_A 26 DEQSYARLIKRQIEN--------GI-DAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGS-NATHEAVGL 95 (301)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCC-SSHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCC-CCHHHHHHH
Confidence 667777777765554 44 4455556667655445666667777776655 4799986511 245678899
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEE-Ec-----CCCCCHHHHHHHHHh
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVI-AN-----GNIQCLADVEACLAQ 353 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~da~~~l~~ 353 (487)
++.+++.|+|++++..- .|..+. ..+.++.|.+.+++||+ +| |--.+++.+.++.+.
T Consensus 96 a~~a~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 96 AKFAKEHGADGILSVAP------YYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRD 161 (301)
T ss_dssp HHHHHHTTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCC------CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhc
Confidence 99999999999999432 122221 34778888888999987 43 666788888888754
No 319
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=96.04 E-value=0.061 Score=53.24 Aligned_cols=123 Identities=20% Similarity=0.117 Sum_probs=84.7
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 33 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~la 102 (307)
T 3s5o_A 33 DYGKLEENLHKLGTF--------PF-RGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGC-ESTQATVEMT 102 (307)
T ss_dssp CHHHHHHHHHHHTTS--------CC-SEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCC-CCHHHHHHHH
Confidence 677778877776665 54 4566667677765445666677888777765 5888886511 2455788899
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCC-----CCCHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTG-----LASWEHITAVRKALTIPVIA-N-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g-----~~~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|.. ...++.++.|.+.+++||+. | |--.+++.+.++.+
T Consensus 103 ~~A~~~Gadavlv~~P------~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 103 VSMAQVGADAAMVVTP------CYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQ 168 (307)
T ss_dssp HHHHHTTCSEEEEECC------CTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHcCCCEEEEcCC------CcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhc
Confidence 9999999999999432 1221 11347788888889999874 3 44467888877763
No 320
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=96.03 E-value=0.015 Score=59.08 Aligned_cols=104 Identities=9% Similarity=-0.003 Sum_probs=68.0
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeeccC-----------CHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCcc
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFCGN-----------DSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYG 249 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~-----------d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G 249 (487)
+.+..+...++++ ....+ ||+|+|... +.+++.++++.+++. .|.|+++.+.-. +...
T Consensus 207 lenr~r~~~eiv~avr~~vg~~-~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~-----~~~~ 280 (364)
T 1vyr_A 207 VENRARLVLEVVDAVCNEWSAD-RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLA-----GGKP 280 (364)
T ss_dssp HHHHTHHHHHHHHHHHHHSCGG-GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTT-----BCCC
T ss_pred hhcChhhHHHHHHHHHHhcCCC-cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCccc-----CCCc
Confidence 3444444545553 33335 999998743 344677788888876 899988764311 1001
Q ss_pred ccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 250 AYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 250 ~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
..++ +++.+++.+++||++++ ++ +..++.+.+++.++|.|++ ||..
T Consensus 281 ----~~~~----~~~~v~~~~~iPvi~~G----gi-t~~~a~~~l~~g~aD~V~~-gR~~ 326 (364)
T 1vyr_A 281 ----YSEA----FRQKVRERFHGVIIGAG----AY-TAEKAEDLIGKGLIDAVAF-GRDY 326 (364)
T ss_dssp ----CCHH----HHHHHHHHCCSEEEEES----SC-CHHHHHHHHHTTSCSEEEE-SHHH
T ss_pred ----ccHH----HHHHHHHHCCCCEEEEC----Cc-CHHHHHHHHHCCCccEEEE-CHHH
Confidence 1233 45567778899999998 44 5677777777767999999 8853
No 321
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=96.02 E-value=0.041 Score=54.21 Aligned_cols=122 Identities=15% Similarity=0.160 Sum_probs=82.1
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 26 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la 95 (297)
T 3flu_A 26 HYEQLRDLIDWHIEN--------GT-DGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGA-NNTVEAIALS 95 (297)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHHHHHH
Confidence 667777777765554 44 4455556667665445666667777776655 5899986511 2456788999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEE-Ec-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVI-AN-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. ..+.++.|.+++++||+ +| |--.+++.+.++.
T Consensus 96 ~~a~~~Gadavlv~~P------~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 96 QAAEKAGADYTLSVVP------YYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp HHHHHTTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHHcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH
Confidence 9999999999999432 122221 24778888888999987 44 5556777777765
No 322
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.02 E-value=0.022 Score=60.90 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=57.0
Q ss_pred cHHHHHHHHHHcC---CcEEEEEccccCC--CCCCC-CCCCHHHHHHHHhh------CCCcEEEcCCCCCHHHHHHHHHh
Q psy7343 286 KTVEYARMLERAG---CQLLAVHGRTVDQ--RGMNT-GLASWEHITAVRKA------LTIPVIANGNIQCLADVEACLAQ 353 (487)
Q Consensus 286 ~~~e~a~~le~~G---~d~I~VhgRt~~~--~g~~~-g~~~~~~i~~i~~~------~~iPVi~nGgI~s~~da~~~l~~ 353 (487)
+..+ +....+.| +|+|.+ |-.... +..+. .+..++.++++++. .++||++-||| +.+++.++++.
T Consensus 117 t~ee-a~~A~~~G~~~aDYv~~-Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~ 193 (540)
T 3nl6_A 117 FPEE-VDELSKMGPDMVDYIGV-GTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQ 193 (540)
T ss_dssp SHHH-HHHHHHTCC--CCEEEE-SCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHH
T ss_pred CHHH-HHHHHHcCCCCCCEEEE-cCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHh
Confidence 4444 45667789 999999 432111 11111 12346777777765 48999999999 78999999952
Q ss_pred -------cCCcEEEeccccccCcc
Q psy7343 354 -------TGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 354 -------~Gad~VmiGRa~l~~P~ 370 (487)
.|+|+|.++++++..++
T Consensus 194 ~~~~g~~~GadgvAVvsaI~~a~d 217 (540)
T 3nl6_A 194 CVSSNGKRSLDGICVVSDIIASLD 217 (540)
T ss_dssp CBCTTSSCBCSCEEESHHHHTCTT
T ss_pred hcccccccCceEEEEeHHHhcCCC
Confidence 78999999999997554
No 323
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.02 E-value=0.0058 Score=57.97 Aligned_cols=86 Identities=16% Similarity=0.136 Sum_probs=62.0
Q ss_pred hccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHH
Q psy7343 269 AVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADV 347 (487)
Q Consensus 269 ~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da 347 (487)
..+++++.- ..+..++ ....+.|+|.|.++.- .. .. -.+.++.++..+ ++|+++.||| +.+.+
T Consensus 117 ~~g~~~i~G------~~t~~e~-~~A~~~Gad~vk~FPa--~~---~~---G~~~lk~i~~~~~~ipvvaiGGI-~~~N~ 180 (225)
T 1mxs_A 117 DSEIPLLPG------ISTPSEI-MMGYALGYRRFKLFPA--EI---SG---GVAAIKAFGGPFGDIRFCPTGGV-NPANV 180 (225)
T ss_dssp HCSSCEECE------ECSHHHH-HHHHTTTCCEEEETTH--HH---HT---HHHHHHHHHTTTTTCEEEEBSSC-CTTTH
T ss_pred HhCCCEEEe------eCCHHHH-HHHHHCCCCEEEEccC--cc---cc---CHHHHHHHHhhCCCCeEEEECCC-CHHHH
Confidence 457776643 2344444 5566899999999441 00 00 157889999888 8999999999 46889
Q ss_pred HHHHHhcCCcEEEeccccccCccc
Q psy7343 348 EACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 348 ~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
.++++..|+++|. |++++..+.+
T Consensus 181 ~~~l~~~Ga~~v~-gSai~~~~~i 203 (225)
T 1mxs_A 181 RNYMALPNVMCVG-TTWMLDSSWI 203 (225)
T ss_dssp HHHHHSTTBCCEE-ECTTSCHHHH
T ss_pred HHHHhccCCEEEE-EchhcCchhh
Confidence 9999448999999 9887766555
No 324
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.01 E-value=0.048 Score=54.22 Aligned_cols=123 Identities=20% Similarity=0.226 Sum_probs=83.7
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+..-|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 41 D~~~l~~li~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~-~st~~ai~la 110 (315)
T 3si9_A 41 DEKAFCNFVEWQITQ--------GI-NGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS-NSTSEAVELA 110 (315)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHHHH
Confidence 667777777765554 44 3455556667665445666667777776655 5899986511 2456788899
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEE-Ec-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVI-AN-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+ +| |--.+++.+.++.+
T Consensus 111 ~~A~~~Gadavlv~~P------~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 111 KHAEKAGADAVLVVTP------YYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp HHHHHTTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 9999999999999432 122221 34778888888999987 43 65667888888875
No 325
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.00 E-value=0.037 Score=54.69 Aligned_cols=123 Identities=11% Similarity=0.205 Sum_probs=82.1
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 30 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~-~~t~~ai~la 99 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQ--------GI-DGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGC-VSTAESQQLA 99 (303)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHH
Confidence 667777777765554 44 4455556667665445666677777776655 5899987611 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCC-CcEEE-c-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALT-IPVIA-N-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~-iPVi~-n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.++ +||+. | |--.+++.+.++.+
T Consensus 100 ~~A~~~Gadavlv~~P------~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 100 ASAKRYGFDAVSAVTP------FYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT 164 (303)
T ss_dssp HHHHHHTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHhCCCCEEEecCC------CCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 9999999999999432 122221 2467778888888 99864 4 44467888888763
No 326
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.99 E-value=0.04 Score=54.48 Aligned_cols=122 Identities=17% Similarity=0.152 Sum_probs=82.0
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 35 D~~~l~~lv~~li~~--------Gv-~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~st~~ai~la 104 (304)
T 3cpr_A 35 DIAAGREVAAYLVDK--------GL-DSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGT-NNTRTSVELA 104 (304)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCC-CCHHHHHHHH
Confidence 667777777766555 44 4455666677765445666667777776655 4899887611 1445788889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |---+++.+.++.
T Consensus 105 ~~A~~~Gadavlv~~P------~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 167 (304)
T 3cpr_A 105 EAAASAGADGLLVVTP------YYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLS 167 (304)
T ss_dssp HHHHHTTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 9999999999999422 122222 246778888889999864 4 4445778777775
No 327
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.98 E-value=0.027 Score=54.86 Aligned_cols=77 Identities=17% Similarity=0.275 Sum_probs=61.9
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
.+..++++.+++.|+++|.|.. ... .+.| ..+.++++++.+++||+..+.|.+..++.++. ..|||+|.++-+
T Consensus 72 ~~p~~~A~~y~~~GA~~isvlt--d~~--~f~G--s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~-~~GAD~VlLi~a 144 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVT--EQR--RFQG--SLDDLDAVRASVSIPVLRKDFVVQPYQIHEAR-AHGADMLLLIVA 144 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEEC--CGG--GHHH--HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEEEGG
T ss_pred CCHHHHHHHHHHcCCCEEEEec--Chh--hcCC--CHHHHHHHHHhCCCCEEECccccCHHHHHHHH-HcCCCEEEEecc
Confidence 4789999999999999999831 111 1222 35788999999999999999999999899888 799999999987
Q ss_pred cccC
Q psy7343 365 NLYN 368 (487)
Q Consensus 365 ~l~~ 368 (487)
.+.+
T Consensus 145 ~l~~ 148 (272)
T 3qja_A 145 ALEQ 148 (272)
T ss_dssp GSCH
T ss_pred cCCH
Confidence 7654
No 328
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.97 E-value=0.041 Score=51.65 Aligned_cols=79 Identities=25% Similarity=0.373 Sum_probs=66.6
Q ss_pred CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHH
Q psy7343 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACL 351 (487)
Q Consensus 272 iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l 351 (487)
.||+.-+|.. +.++...+++.+.+.|++.|-|.-|+ +.-.+.|+++++.+.-.+|+.|-|.|.+++++++
T Consensus 13 ~~vi~Vir~~-~~~~a~~~a~al~~gGi~~iEvt~~t---------~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai 82 (217)
T 3lab_A 13 KPLIPVIVID-DLVHAIPMAKALVAGGVHLLEVTLRT---------EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAI 82 (217)
T ss_dssp CSEEEEECCS-CGGGHHHHHHHHHHTTCCEEEEETTS---------TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHH
T ss_pred CCEEEEEEcC-CHHHHHHHHHHHHHcCCCEEEEeCCC---------ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHH
Confidence 4666666654 77899999999999999999995453 2346899999999877899999999999999999
Q ss_pred HhcCCcEEEe
Q psy7343 352 AQTGVAGVMT 361 (487)
Q Consensus 352 ~~~Gad~Vmi 361 (487)
+.||+.++.
T Consensus 83 -~AGA~fivs 91 (217)
T 3lab_A 83 -DAGAQFIVS 91 (217)
T ss_dssp -HHTCSEEEE
T ss_pred -HcCCCEEEe
Confidence 799999975
No 329
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=95.95 E-value=0.044 Score=51.63 Aligned_cols=153 Identities=10% Similarity=0.074 Sum_probs=83.2
Q ss_pred ChhHHHHHHhcCC-CCCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHh
Q psy7343 189 DKKLRQEILMSTP-EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLR 267 (487)
Q Consensus 189 ~~~~~~~~l~~~~-~~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~ 267 (487)
.++..+++-+..+ ....+=+|+. ..|+.+.+++ .+. |+ ..+++|+..| .+.+.+.++.++
T Consensus 45 G~~~v~~l~~~~p~~~iflDlKl~-Dip~t~~~~~---~~~--------Ga-d~vtVH~~~g------~~~l~~a~~~~~ 105 (221)
T 3exr_A 45 GSELVEVLRSLFPDKIIVADTKCA-DAGGTVAKNN---AVR--------GA-DWMTCICSAT------IPTMKAARKAIE 105 (221)
T ss_dssp CTHHHHHHHHHCTTSEEEEEEEEC-SCHHHHHHHH---HTT--------TC-SEEEEETTSC------HHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCcEEEEEEee-ccHHHHHHHH---HHc--------CC-CEEEEeccCC------HHHHHHHHHHHH
Confidence 4444444433221 2233445665 5677766653 333 33 3455555422 344556666665
Q ss_pred hhcc--CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCC-CCHHHHHHHHhhC--CCcEEEcCCCC
Q psy7343 268 QAVQ--VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL-ASWEHITAVRKAL--TIPVIANGNIQ 342 (487)
Q Consensus 268 ~~~~--iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~-~~~~~i~~i~~~~--~iPVi~nGgI~ 342 (487)
+.-. ..+.+-+ . ...+ .+.++.+.+.|++.+.+|--...+. .|. ...+.++.+++.. +++|...|||
T Consensus 106 ~~g~~~~~~~Vt~--l-ts~~-~~~~~~~~~~~~~~~v~~~a~~~~~---~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI- 177 (221)
T 3exr_A 106 DINPDKGEIQVEL--Y-GDWT-YDQAQQWLDAGISQAIYHQSRDALL---AGETWGEKDLNKVKKLIEMGFRVSVTGGL- 177 (221)
T ss_dssp HHCTTTCEEEEEC--C-SSCC-HHHHHHHHHTTCCEEEEECCHHHHH---HTCCCCHHHHHHHHHHHHHTCEEEEESSC-
T ss_pred hcCCCcceEEEEE--c-CCCC-HHHHHHHHcCCHHHHHHHHHHhcCC---CccccCHHHHHHHHHhhcCCceEEEECCC-
Confidence 4321 2222222 1 1112 3334455677999888853211111 121 2344566666654 6888999999
Q ss_pred CHHHHHHHHHhcCCcEEEeccccccCc
Q psy7343 343 CLADVEACLAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 343 s~~da~~~l~~~Gad~VmiGRa~l~~P 369 (487)
+++++..+. ..|||.+.+||++...+
T Consensus 178 ~~~~~~~~~-~aGad~~VvG~~I~~a~ 203 (221)
T 3exr_A 178 SVDTLKLFE-GVDVFTFIAGRGITEAK 203 (221)
T ss_dssp CGGGGGGGT-TCCCSEEEECHHHHTSS
T ss_pred CHHHHHHHH-HCCCCEEEECchhhCCC
Confidence 566777776 78999999999877543
No 330
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.94 E-value=0.018 Score=58.31 Aligned_cols=70 Identities=17% Similarity=0.258 Sum_probs=55.5
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
....+.++.+.++|+|.|.++.-.. +. ...|+.++++++.. ++||++ |+|.|+++++.+. +.|||+|.+|
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G-----~~-~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~-~aGaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHA-----HA-KYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLA-SCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCC-----SS-HHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHH-HTTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCC-----Cc-HhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHH-HcCCCEEEEc
Confidence 4567889999999999999953210 11 12368899999886 899988 7799999999988 7899999985
No 331
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.94 E-value=0.042 Score=54.04 Aligned_cols=123 Identities=9% Similarity=0.068 Sum_probs=82.4
Q ss_pred CHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHH
Q psy7343 214 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 214 d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~ 290 (487)
|.+.+.+.++.+.+ . |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.
T Consensus 22 D~~~l~~lv~~li~~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~l 91 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKM--------KV-DGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS-VNLKEAVEL 91 (293)
T ss_dssp CHHHHHHHHHHHHHTS--------CC-SEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC-SCHHHHHHH
T ss_pred CHHHHHHHHHHHHhhC--------CC-cEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC-CCHHHHHHH
Confidence 66777777776555 5 44 4455566677665445666677777776655 5899887611 144577888
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHHH
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACLA 352 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l~ 352 (487)
++.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.+
T Consensus 92 a~~a~~~Gadavlv~~P------~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 92 GKYATELGYDCLSAVTP------FYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYK 156 (293)
T ss_dssp HHHHHHHTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhc
Confidence 99999999999999432 122222 246777888888999864 4 44467888888763
No 332
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.94 E-value=0.044 Score=53.88 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=82.6
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+..-|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 21 D~~~l~~lv~~li~~--------Gv-~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la 90 (292)
T 3daq_A 21 NLEALKAHVNFLLEN--------NA-QAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGT-NDTEKSIQAS 90 (292)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCc-ccHHHHHHHH
Confidence 667777777765554 44 4455566667655445566666777666654 5899987521 2456788999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEE-Ec-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVI-AN-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|..+. ..+.++.|.+.+++||+ +| |--.+++.+.++.+
T Consensus 91 ~~a~~~Gadavlv~~P------~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 91 IQAKALGADAIMLITP------YYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 9999999999999432 122221 24677888888899987 44 66677888887763
No 333
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=95.92 E-value=0.017 Score=58.90 Aligned_cols=105 Identities=10% Similarity=-0.011 Sum_probs=67.4
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeeccC----------CHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccc
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFCGN----------DSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGA 250 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~----------d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~ 250 (487)
+.+..+...++++ ....+ ||+|+|... +.+++.++++.+++. .|.|+++.|. .. . ...+
T Consensus 212 lenR~r~~~eiv~aVr~avg~~-~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~-~~-~--~~~~- 285 (377)
T 2r14_A 212 IENRARFPLEVVDAVAEVFGPE-RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPD-WI-G--GDIT- 285 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC----------C-
T ss_pred hhhchHHHHHHHHHHHHHcCCC-cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCc-cc-C--CCCc-
Confidence 4344444445553 22334 999998632 356778889988877 8999988654 11 0 0001
Q ss_pred cccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 251 YLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 251 ~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
.+++. ++.+++.+++||++++ ++ +..++.+.+++.+||.|++ ||..
T Consensus 286 ---~~~~~----~~~ik~~~~iPvi~~G----gi-~~~~a~~~l~~g~aD~V~i-gR~~ 331 (377)
T 2r14_A 286 ---YPEGF----REQMRQRFKGGLIYCG----NY-DAGRAQARLDDNTADAVAF-GRPF 331 (377)
T ss_dssp ---CCTTH----HHHHHHHCCSEEEEES----SC-CHHHHHHHHHTTSCSEEEE-SHHH
T ss_pred ---chHHH----HHHHHHHCCCCEEEEC----CC-CHHHHHHHHHCCCceEEee-cHHH
Confidence 13444 4456777899999998 55 4667777777767999999 8853
No 334
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.92 E-value=0.044 Score=54.06 Aligned_cols=122 Identities=16% Similarity=0.140 Sum_probs=82.1
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 23 D~~~l~~lv~~li~~--------Gv-~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la 92 (300)
T 3eb2_A 23 RADVMGRLCDDLIQA--------GV-HGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS-TSVADAVAQA 92 (300)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHHHH
Confidence 667777777766555 55 4556667777765445666677777776655 5899886521 2456788999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEE-Ec-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVI-AN-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..-. |..+. ..+.++.|.+.+++||+ +| |--.+++.+.++.
T Consensus 93 ~~a~~~Gadavlv~~P~------y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 155 (300)
T 3eb2_A 93 KLYEKLGADGILAILEA------YFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA 155 (300)
T ss_dssp HHHHHHTCSEEEEEECC------SSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCCC------CCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH
Confidence 99999999999994321 22221 34678888888999986 44 4345677776664
No 335
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.92 E-value=0.064 Score=52.72 Aligned_cols=122 Identities=13% Similarity=0.105 Sum_probs=83.7
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++-+-- .+..+..+.+
T Consensus 22 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~la 91 (294)
T 3b4u_A 22 DIDAMIAHARRCLSN--------GC-DSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV-DSIEDAADQS 91 (294)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-ccHHHHHHHH
Confidence 667777777766555 44 4455666677765446666777888777765 5899987621 1445788899
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCC-CC---CHHHHHHHHhhC---CCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTG-LA---SWEHITAVRKAL---TIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g-~~---~~~~i~~i~~~~---~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|.. +. .++.++.|.+.+ ++||+. | |--.+++.+.++.
T Consensus 92 ~~A~~~Gadavlv~~P------~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 92 AEALNAGARNILLAPP------SYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp HHHHHTTCSEEEECCC------CSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCC------cCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 9999999999999322 1322 22 246778888888 899864 4 5456788888876
No 336
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.88 E-value=0.034 Score=56.47 Aligned_cols=97 Identities=19% Similarity=0.276 Sum_probs=69.5
Q ss_pred ChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CC
Q psy7343 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TI 333 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~i 333 (487)
+++...+.++.+++.-.++|.+.+ +.+ .+..+.++.+.++|+|.|.|+.-. + . .....+.++++++.. ++
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~v--g~~-~~~~~~~~~lieaGvd~I~idta~----G-~-~~~~~~~I~~ik~~~p~v 150 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAV--GAA-PGNEERVKALVEAGVDVLLIDSSH----G-H-SEGVLQRIRETRAAYPHL 150 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEEC--CSC-TTCHHHHHHHHHTTCSEEEEECSC----T-T-SHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHhcCceeEEEEe--ccC-hhHHHHHHHHHhCCCCEEEEeCCC----C-C-CHHHHHHHHHHHHhcCCC
Confidence 577777888888875444555543 211 245777889999999999984210 0 1 011236788898887 88
Q ss_pred cEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 334 PVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 334 PVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
||++ |.+.|.++++++. +.|||+|.+|
T Consensus 151 ~Vi~-G~v~t~e~A~~a~-~aGAD~I~vG 177 (366)
T 4fo4_A 151 EIIG-GNVATAEGARALI-EAGVSAVKVG 177 (366)
T ss_dssp EEEE-EEECSHHHHHHHH-HHTCSEEEEC
T ss_pred ceEe-eeeCCHHHHHHHH-HcCCCEEEEe
Confidence 8887 7899999999988 7899999995
No 337
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=95.85 E-value=0.016 Score=57.54 Aligned_cols=72 Identities=18% Similarity=0.185 Sum_probs=45.9
Q ss_pred HHHHHHhhhccCcEE--EEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCC-HHHHHHHHhhCCCcEEE
Q psy7343 261 NLVSSLRQAVQVPVS--CKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLAS-WEHITAVRKALTIPVIA 337 (487)
Q Consensus 261 eiv~~v~~~~~iPV~--vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~-~~~i~~i~~~~~iPVi~ 337 (487)
++++.+++..++||+ +.+ ++.+..++.+.++ .|+|+|+| |+.-... .+ ...++++++.+.
T Consensus 230 ell~~i~~~~~IPVV~VAeG----GI~Tpeda~~~l~-~GaDgV~V-GsaI~~a------~dP~~aar~l~~ai~----- 292 (330)
T 2yzr_A 230 EVLLEVKKLGRLPVVNFAAG----GVATPADAALMMQ-LGSDGVFV-GSGIFKS------ENPLERARAIVEATY----- 292 (330)
T ss_dssp HHHHHHHHHTSCSSEEEECS----CCCSHHHHHHHHH-TTCSCEEE-SHHHHTS------SCHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHhCCCCeEEEEEC----CCCCHHHHHHHHH-cCcCEEee-HHHHhcC------CCHHHHHHHHHHHHH-----
Confidence 667777777789984 665 7777888877776 59999999 7753211 11 234455555432
Q ss_pred cCCCCCHHHHHHHH
Q psy7343 338 NGNIQCLADVEACL 351 (487)
Q Consensus 338 nGgI~s~~da~~~l 351 (487)
...+++-+.++-
T Consensus 293 --~~~~~~~~~~~s 304 (330)
T 2yzr_A 293 --NYDKPDIVAEVS 304 (330)
T ss_dssp --TTTCHHHHHHHH
T ss_pred --hcCCHHHHHHHH
Confidence 345566555554
No 338
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.83 E-value=0.049 Score=53.49 Aligned_cols=122 Identities=14% Similarity=0.192 Sum_probs=81.4
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 20 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~la 89 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQ--------GT-NSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGA-NSTREAIELT 89 (291)
T ss_dssp CHHHHHHHHHHHHHH--------TC-CEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC--------CC-CEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCC-CCHHHHHHHH
Confidence 667777777765554 44 3445555567655445666667777776655 5899986511 2456788899
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. ..+.++.|.+.+++||+. | |--.+++.+.++.
T Consensus 90 ~~a~~~Gadavlv~~P------~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3tak_A 90 KAAKDLGADAALLVTP------YYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLA 152 (291)
T ss_dssp HHHHHHTCSEEEEECC------CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHhcCCCEEEEcCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHH
Confidence 9999999999999432 122221 247788888889999874 3 5556777777765
No 339
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.79 E-value=0.68 Score=43.68 Aligned_cols=102 Identities=17% Similarity=0.161 Sum_probs=67.2
Q ss_pred CChHHHHHHHHHHhhhccCcEEEEeecccccc----cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHh
Q psy7343 254 DDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVN----KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRK 329 (487)
Q Consensus 254 ~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~----~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~ 329 (487)
.+++.+.+ +++..++||+=-+|+..... +.......+....+|++.+... |+.....||+.++.+..
T Consensus 102 E~~~~~~~----l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~-----GGtG~~fDW~~~~~~~~ 172 (228)
T 4aaj_A 102 ALPQTIDT----LKKEFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTG-----AGSGKLHDLRVSSLVAR 172 (228)
T ss_dssp CCHHHHHH----HHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC------------CCCHHHHHHHH
T ss_pred cCHHHHHH----HhhccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCCC-----CCCcCcCChHHHHHhhh
Confidence 35665554 55566888876666642211 2233344556678999998532 22222458998887765
Q ss_pred hCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 330 ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 330 ~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
+.|++.+||++ ++.+.++++..+..+|=+..|.-.
T Consensus 173 --~~p~iLAGGL~-peNV~~Ai~~~~P~gVDVsSGVEs 207 (228)
T 4aaj_A 173 --KIPVIVAGGLN-AENVEEVIKVVKPYGVDVSSGVEK 207 (228)
T ss_dssp --HSCEEEESSCC-TTTHHHHHHHHCCSEEEESGGGEE
T ss_pred --cCCeEEECCCC-HHHHHHHHHHhCCCEEEeCCCCCC
Confidence 47999999995 788888887789999999999863
No 340
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.77 E-value=0.034 Score=54.65 Aligned_cols=122 Identities=12% Similarity=0.116 Sum_probs=81.7
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 20 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~la 89 (292)
T 2ojp_A 20 CRASLKKLIDYHVAS--------GT-SAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGA-NATAEAISLT 89 (292)
T ss_dssp CHHHHHHHHHHHHHH--------TC-CEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC-ccHHHHHHHH
Confidence 667777777766555 44 4455566677665445666667777776655 5899987611 1345678888
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.
T Consensus 90 ~~a~~~Gadavlv~~P------~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (292)
T 2ojp_A 90 QRFNDSGIVGCLTVTP------YYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLA 152 (292)
T ss_dssp HHTTTSSCSEEEEECC------CSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHH
T ss_pred HHHHhcCCCEEEECCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHH
Confidence 8899999999999432 122221 246778888888999864 4 4446788888776
No 341
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=95.76 E-value=0.077 Score=53.95 Aligned_cols=133 Identities=10% Similarity=0.105 Sum_probs=90.1
Q ss_pred CCeeeeeccCCHHHHHHHHH-hhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc---CcEEEEee
Q psy7343 204 RPLIIQFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ---VPVSCKIR 279 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~---iPV~vKiR 279 (487)
.|+...+.+.+++.+.+.++ .+++.+..+.+..|. .+++.-.+.+++++++++ +.+.+-..
T Consensus 152 vp~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDaN 216 (377)
T 2pge_A 152 IPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDAN 216 (377)
T ss_dssp EEBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEECT
T ss_pred EEEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 34444455557777765554 444446655554332 245555667777777764 44555433
Q ss_pred cccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHH--HHHHHHhcCCc
Q psy7343 280 IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLAD--VEACLAQTGVA 357 (487)
Q Consensus 280 ~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~d--a~~~l~~~Gad 357 (487)
-+++.++..++++.++++++..|-= + . ...+++..+++++.+++||.+.-.+.|..+ +.++++...+|
T Consensus 217 ~~~~~~~a~~~~~~l~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d 286 (377)
T 2pge_A 217 GAFSPANAPQRLKRLSQFHLHSIEQ--------P-I-RQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQ 286 (377)
T ss_dssp TBBCTTTHHHHHHHHHTTCCSEEEC--------C-B-CSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCS
T ss_pred CCCCHHHHHHHHHHHhcCCCcEEEc--------c-C-CcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCC
Confidence 3567788899999999998876632 1 1 235789999999999999999888888888 77888777889
Q ss_pred EEEe
Q psy7343 358 GVMT 361 (487)
Q Consensus 358 ~Vmi 361 (487)
.+++
T Consensus 287 ~i~i 290 (377)
T 2pge_A 287 YIIL 290 (377)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 342
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=95.74 E-value=0.014 Score=59.58 Aligned_cols=106 Identities=11% Similarity=-0.048 Sum_probs=67.2
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeeccC----------CHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccc
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFCGN----------DSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGA 250 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~----------d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~ 250 (487)
+.+..+...++++ ....+ ||+|+|... +.+++.++++.+++. .|.|+++.+. .. .. +.
T Consensus 213 lenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~-~~--~~---~~ 285 (376)
T 1icp_A 213 LENRCRFALEIVEAVANEIGSD-RVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPR-MK--TA---WE 285 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCS-CC--C------
T ss_pred HHHhHHHHHHHHHHHHHHhcCC-ceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCc-cc--CC---CC
Confidence 3334444445553 23335 999999632 245678889999887 8999998653 11 00 11
Q ss_pred cccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc
Q psy7343 251 YLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV 309 (487)
Q Consensus 251 ~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~ 309 (487)
. ..+++. ++.+++.+++||++++ ++ +..++.+.+++.+||.|++ ||..
T Consensus 286 ~-~~~~~~----~~~vr~~~~iPvi~~G----~i-~~~~a~~~l~~g~aD~V~~-gR~~ 333 (376)
T 1icp_A 286 K-IECTES----LVPMRKAYKGTFIVAG----GY-DREDGNRALIEDRADLVAY-GRLF 333 (376)
T ss_dssp ----CCCC----SHHHHHHCCSCEEEES----SC-CHHHHHHHHHTTSCSEEEE-SHHH
T ss_pred c-cccHHH----HHHHHHHcCCCEEEeC----CC-CHHHHHHHHHCCCCcEEee-cHHH
Confidence 0 023333 3446677899999997 55 5677777787777999999 8853
No 343
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=95.70 E-value=0.02 Score=58.98 Aligned_cols=113 Identities=11% Similarity=0.026 Sum_probs=68.6
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeeccC----------CHHHHHHHHHhhCCc-------CcEEEeecCCCcceee
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFCGN----------DSKNLTEAAKLAEPH-------CDGIDINIGCPQMVAK 244 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~----------d~~~~~~aa~~~~~~-------~d~IdiN~GcP~~i~~ 244 (487)
+.+......++++ ....+ ||+|+|... +.+++.++++.+++. .|.|+++.|.-.....
T Consensus 217 lenR~rf~~Eiv~aVr~avg~~-~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~ 295 (402)
T 2hsa_B 217 LANRCKFITQVVQAVVSAIGAD-RVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQ 295 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGG-GEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTT
T ss_pred hhhhhHHHHHHHHHHHHHhCCC-cEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccC
Confidence 4444444555553 22334 899998742 235678888888764 6888887653110000
Q ss_pred ccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 245 RGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 245 ~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.. . ..+ .....-.++++.+++.+++||++++ ++ +..++.+.+++.++|.|++ ||.
T Consensus 296 ~~-~-~~~-~~~~~~~~~~~~vk~~~~iPvi~~G----~i-~~~~a~~~l~~g~aD~V~i-gR~ 350 (402)
T 2hsa_B 296 TE-A-GRL-GSEEEEARLMRTLRNAYQGTFICSG----GY-TRELGIEAVAQGDADLVSY-GRL 350 (402)
T ss_dssp SS-S-TTT-THHHHHHHHHHHHHHHCSSCEEEES----SC-CHHHHHHHHHTTSCSEEEE-SHH
T ss_pred Cc-c-ccc-cCCcchHHHHHHHHHHCCCCEEEeC----CC-CHHHHHHHHHCCCCceeee-cHH
Confidence 00 0 000 0010124566778888999999997 55 5677777777777999999 885
No 344
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.68 E-value=0.034 Score=54.66 Aligned_cols=122 Identities=16% Similarity=0.150 Sum_probs=79.5
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++-+-- .+..+..+.+
T Consensus 20 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~-~~t~~ai~la 89 (291)
T 3a5f_A 20 DFDKLSELIEWHIKS--------KT-DAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGS-NNTAASIAMS 89 (291)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc-ccHHHHHHHH
Confidence 667777777765554 44 4455666677665445666667777776655 5899987621 1445778889
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+.+++.|+|++++..- .|..+. .++.++.|.+.+++||+. | |--.+++.+.++.
T Consensus 90 ~~a~~~Gadavlv~~P------~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3a5f_A 90 KWAESIGVDGLLVITP------YYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELC 152 (291)
T ss_dssp HHHHHTTCSEEEEECC------CSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHhcCCCEEEEcCC------CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 9999999999999432 132222 235556677778999864 4 5556778777775
No 345
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=95.60 E-value=0.075 Score=52.70 Aligned_cols=123 Identities=12% Similarity=0.113 Sum_probs=83.5
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 26 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~-~~t~~ai~la 95 (311)
T 3h5d_A 26 NFDAIPALIEHLLAH--------HT-DGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGT-NDTRDSIEFV 95 (311)
T ss_dssp CTTHHHHHHHHHHHT--------TC-CCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-cCHHHHHHHH
Confidence 556677777765554 44 4455666677665446677777888777765 5899997511 2455788889
Q ss_pred HHHHHcCC-cEEEEEccccCCCCCCCCCC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGC-QLLAVHGRTVDQRGMNTGLA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~-d~I~VhgRt~~~~g~~~g~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l~ 352 (487)
+.+++.|+ |++++..-. |..+. ..+.++.|.+.+++||+. | |--.+++.+.++.+
T Consensus 96 ~~A~~~Ga~davlv~~P~------y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 96 KEVAEFGGFAAGLAIVPY------YNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLAD 160 (311)
T ss_dssp HHHHHSCCCSEEEEECCC------SSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHhcCCCcEEEEcCCC------CCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 99999996 999994321 22221 246788888888999874 4 55567888777763
No 346
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=95.59 E-value=0.15 Score=51.52 Aligned_cols=131 Identities=15% Similarity=0.203 Sum_probs=88.6
Q ss_pred Ceeeeec-cCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc--CcEEEEeec
Q psy7343 205 PLIIQFC-GNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ--VPVSCKIRI 280 (487)
Q Consensus 205 Pv~Vqi~-g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~--iPV~vKiR~ 280 (487)
++...+. +.+++...+.++.+++. +..+-+..|. .+++.-.+.++++++.++ +.+.+-.--
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~l~vDaN~ 197 (370)
T 2chr_A 133 PIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGF---------------RSPQDDLIHMEALSNSLGSKAYLRVDVNQ 197 (370)
T ss_dssp EBEEEECSSCHHHHHHHHHHHHHTTSCCEEEEECSS---------------SCHHHHHHHHHHHHHHTTTTSEEEEECTT
T ss_pred ceeeeeccCchhhhHHHHHHHHhhcccceeeccccc---------------CChHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 3333344 34556677777777665 5544443332 234444555667777663 344443333
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
+|+.++..++++.+++.++.+|- | + . ...+++..+++++.+++||.+.-.+.+..|+.++++...+|.++
T Consensus 198 ~~~~~~A~~~~~~l~~~~~~~iE-------e-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~ 267 (370)
T 2chr_A 198 AWDEQVASVYIPELEALGVELIE-------Q-P-V-GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFS 267 (370)
T ss_dssp CCCTHHHHHHHHHHHTTTCCEEE-------C-C-S-CSSCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEEC
T ss_pred CCCHHHHHHHHHHHHhcCCceec-------C-C-C-ChhhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEE
Confidence 56778889999999999888763 1 1 1 23478999999999999999999999999999999666678764
No 347
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.58 E-value=0.048 Score=54.05 Aligned_cols=123 Identities=12% Similarity=0.131 Sum_probs=83.7
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 27 D~~~l~~lv~~li~~--------Gv-~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la 96 (309)
T 3fkr_A 27 DLASQKRAVDFMIDA--------GS-DGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSH-YSTQVCAARS 96 (309)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCC-chHHHHHHHH
Confidence 667777777766555 54 4566667677765445666677777776655 5899987621 2455788999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCC---CCC---CCHHHHHHHHhhCCCcEEE-c----CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMN---TGL---ASWEHITAVRKALTIPVIA-N----GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~---~g~---~~~~~i~~i~~~~~iPVi~-n----GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .| ..+ ..++.++.|.+.+++||+. | |--.+++.+.++.+
T Consensus 97 ~~A~~~Gadavlv~~P------yy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 97 LRAQQLGAAMVMAMPP------YHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp HHHHHTTCSEEEECCS------CBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCC------CCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 9999999999999321 12 111 1347788888888999864 4 55567888887764
No 348
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=95.55 E-value=0.13 Score=49.44 Aligned_cols=139 Identities=17% Similarity=0.176 Sum_probs=88.4
Q ss_pred CCCeeeeec-c--CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc---cCcEE
Q psy7343 203 DRPLIIQFC-G--NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV---QVPVS 275 (487)
Q Consensus 203 ~~Pv~Vqi~-g--~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~---~iPV~ 275 (487)
+.||++-+- | +++ .+.++.+.+. +++|.|--+. |.. |..+ .+.+...+-+++++++. ++|+.
T Consensus 80 ~~pviaD~~~Gyg~~~---~~~~~~l~~aGa~gv~iEd~~------~~~-~k~l-~~~~e~~~~I~a~~~a~~~~g~~~~ 148 (255)
T 2qiw_A 80 SIPVSVDVESGYGLSP---ADLIAQILEAGAVGINVEDVV------HSE-GKRV-REAQEHADYIAAARQAADVAGVDVV 148 (255)
T ss_dssp SSCEEEECTTCTTCCH---HHHHHHHHHTTCCEEEECSEE------GGG-TTEE-CCHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCEEeccCCCcCcHH---HHHHHHHHHcCCcEEEECCCC------CCC-CCcc-cCHHHHHHHHHHHHHHHHhcCCCeE
Confidence 379998875 3 344 5555544445 6666665332 111 2222 34555666666666542 68988
Q ss_pred EEeeccc----------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEc--CCCCC
Q psy7343 276 CKIRIYQ----------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIAN--GNIQC 343 (487)
Q Consensus 276 vKiR~~~----------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~n--GgI~s 343 (487)
++.|.+- ..++..+-++.++++|+|.|.+++- .+.+.++++.+.+++|+-.+ ++-.+
T Consensus 149 v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~-----------~~~~~~~~i~~~~~~P~n~~~~~~~~~ 217 (255)
T 2qiw_A 149 INGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGL-----------STAEQVERLVDAVSVPVNITAHPVDGH 217 (255)
T ss_dssp EEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCC-----------CSHHHHHHHHTTCSSCBEEECBTTTBB
T ss_pred EEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCC-----------CCHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 8888642 1346677788899999999999432 45678999999999998766 33211
Q ss_pred H-HHHHHHHHhcCCcEEEeccc
Q psy7343 344 L-ADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 344 ~-~da~~~l~~~Gad~VmiGRa 364 (487)
+ -...++- +.|+..|..|-.
T Consensus 218 p~~~~~eL~-~lGv~~v~~~~~ 238 (255)
T 2qiw_A 218 GAGDLATLA-GLGVRRVTFGPL 238 (255)
T ss_dssp TTBCHHHHH-HTTCCEEECTTH
T ss_pred CCCCHHHHH-HcCCCEEEEHHH
Confidence 1 1234444 689999998855
No 349
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.54 E-value=0.024 Score=62.14 Aligned_cols=113 Identities=15% Similarity=0.205 Sum_probs=73.0
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeec-------cCCHHHHHHHHHhhCCc-CcEEEeecCCCcce-eeccCccccc
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFC-------GNDSKNLTEAAKLAEPH-CDGIDINIGCPQMV-AKRGHYGAYL 252 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~-------g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i-~~~gr~G~~l 252 (487)
+.+......++++ ....+.|++++|. |.+.+++.++++.+++. .|.|+++.|..... .....+.
T Consensus 187 ~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~--- 263 (671)
T 1ps9_A 187 YRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPV--- 263 (671)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTS---
T ss_pred HHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccC---
Confidence 3334444455553 3455789999987 45678888999988876 89998876531110 0000000
Q ss_pred cCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 253 QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 253 ~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
......+.++.+++.+++||++++ ++.+..++.+.+++.++|.|++ ||.
T Consensus 264 --~~~~~~~~~~~i~~~~~iPvi~~G----gi~~~~~a~~~l~~g~aD~V~~-gR~ 312 (671)
T 1ps9_A 264 --PRGAFSWVTRKLKGHVSLPLVTTN----RINDPQVADDILSRGDADMVSM-ARP 312 (671)
T ss_dssp --CTTTTHHHHHHHTTSCSSCEEECS----SCCSHHHHHHHHHTTSCSEEEE-STH
T ss_pred --CcchHHHHHHHHHHhcCceEEEeC----CCCCHHHHHHHHHcCCCCEEEe-CHH
Confidence 011123456678888999999997 5557777777777766999999 875
No 350
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.54 E-value=0.062 Score=51.02 Aligned_cols=79 Identities=22% Similarity=0.197 Sum_probs=64.5
Q ss_pred cEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHH
Q psy7343 273 PVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLA 352 (487)
Q Consensus 273 PV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~ 352 (487)
+|+.=+|.. +.++..++++.+.+.|++.|-|.-| .+...+.++++++.+.-.+++.|.|.+.++++.++
T Consensus 35 ~vv~Vir~~-~~~~a~~~a~al~~gGi~~iEvt~~---------t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai- 103 (232)
T 4e38_A 35 KVIPVIAID-NAEDIIPLGKVLAENGLPAAEITFR---------SDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAK- 103 (232)
T ss_dssp CEEEEECCS-SGGGHHHHHHHHHHTTCCEEEEETT---------STTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHH-
T ss_pred CEEEEEEcC-CHHHHHHHHHHHHHCCCCEEEEeCC---------CCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHH-
Confidence 455555543 7778999999999999999999433 23346889999998866789999999999999999
Q ss_pred hcCCcEEEec
Q psy7343 353 QTGVAGVMTA 362 (487)
Q Consensus 353 ~~Gad~VmiG 362 (487)
+.|||+++..
T Consensus 104 ~AGA~fIvsP 113 (232)
T 4e38_A 104 EAGATFVVSP 113 (232)
T ss_dssp HHTCSEEECS
T ss_pred HcCCCEEEeC
Confidence 7999999865
No 351
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=95.49 E-value=0.06 Score=53.61 Aligned_cols=123 Identities=14% Similarity=0.075 Sum_probs=82.0
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 30 D~~~l~~lv~~li~~--------Gv-~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~la 99 (318)
T 3qfe_A 30 DLASQERYYAYLARS--------GL-TGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGA-HSTRQVLEHI 99 (318)
T ss_dssp CHHHHHHHHHHHHTT--------TC-SEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHHHH
Confidence 667777777766555 44 4455666677665445666667777776655 5899986511 2456788999
Q ss_pred HHHHHcCCcEEEEEccccCCCCCCC-CC----CCHHHHHHHHhhCCCcEEE-c------CCCCCHHHHHHHHH
Q psy7343 292 RMLERAGCQLLAVHGRTVDQRGMNT-GL----ASWEHITAVRKALTIPVIA-N------GNIQCLADVEACLA 352 (487)
Q Consensus 292 ~~le~~G~d~I~VhgRt~~~~g~~~-g~----~~~~~i~~i~~~~~iPVi~-n------GgI~s~~da~~~l~ 352 (487)
+.+++.|+|++++..- .|- .+ ..++.++.|.+.+++||+. | |--.+++.+.++.+
T Consensus 100 ~~a~~~Gadavlv~~P------~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 100 NDASVAGANYVLVLPP------AYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp HHHHHHTCSEEEECCC------CC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred HHHHHcCCCEEEEeCC------cccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 9999999999999321 121 11 1247788888889999873 3 33357888888774
No 352
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=95.44 E-value=0.024 Score=57.55 Aligned_cols=103 Identities=13% Similarity=0.061 Sum_probs=67.1
Q ss_pred hhcChhHHHHHHh----cCCCCCCeeeeeccC----------CHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccc
Q psy7343 186 FIADKKLRQEILM----STPEDRPLIIQFCGN----------DSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGA 250 (487)
Q Consensus 186 Ll~~~~~~~~~l~----~~~~~~Pv~Vqi~g~----------d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~ 250 (487)
+.+..+...++++ ....+ ||+|+|... +.+++.++++.+++. .|.|+++.+. . .+.
T Consensus 207 lenr~r~~~eiv~avr~~vg~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~-~----~~~--- 277 (365)
T 2gou_A 207 LENRLRFLDEVVAALVDAIGAE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVD-W----DDA--- 277 (365)
T ss_dssp HHHHTHHHHHHHHHHHHHHCGG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB-T----TBC---
T ss_pred hhhhHHHHHHHHHHHHHHcCCC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-c----CCC---
Confidence 3334444445553 23334 999998742 346778888888876 8899887553 1 111
Q ss_pred cccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 251 YLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 251 ~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.. ..+ ++++.+++.+++||++++ ++ +..++.+.+++.++|.|++ ||.
T Consensus 278 ~~-~~~----~~~~~i~~~~~iPvi~~G----gi-~~~~a~~~l~~g~aD~V~i-gR~ 324 (365)
T 2gou_A 278 PD-TPV----SFKRALREAYQGVLIYAG----RY-NAEKAEQAINDGLADMIGF-GRP 324 (365)
T ss_dssp CC-CCH----HHHHHHHHHCCSEEEEES----SC-CHHHHHHHHHTTSCSEEEC-CHH
T ss_pred CC-ccH----HHHHHHHHHCCCcEEEeC----CC-CHHHHHHHHHCCCcceehh-cHH
Confidence 00 123 455667888899999998 45 5667777777666999999 885
No 353
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=95.41 E-value=0.11 Score=53.09 Aligned_cols=140 Identities=13% Similarity=0.064 Sum_probs=85.4
Q ss_pred CeeeeeccCCHHHHHHHHH-hhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc-CcEEEEeeccc
Q psy7343 205 PLIIQFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VPVSCKIRIYQ 282 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iPV~vKiR~~~ 282 (487)
|+...+...+++++.+.++ .+++.|..+-+..|.+..... .. ..++.-.+.+++++++++ +.+.+-.--+|
T Consensus 156 ~~~~t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~---~~----~~~~~di~~v~avR~a~~d~~L~vDaN~~w 228 (393)
T 3u9i_A 156 ETDVTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDAT---TI----RTMEHDLARIVAIRDVAPTARLILDGNCGY 228 (393)
T ss_dssp ECCEEEC---CHHHHHHHHHHHTTTCCEEEEECC----------CH----HHHHHHHHHHHHHHHHSTTSEEEEECCSCC
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCccccc---cc----ccHHHHHHHHHHHHHHCCCCeEEEEccCCC
Confidence 4334444457777776555 455557777777665211000 00 124444556677777763 33333222245
Q ss_pred ccccHHHHHHHH--HHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 283 DVNKTVEYARML--ERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 283 d~~~~~e~a~~l--e~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
+..+..++++.+ ++.++.+|- | + . ...+++..+++++.+++||.+.=.+.+..++.++++...+|.++
T Consensus 229 ~~~~A~~~~~~L~~~~~~i~~iE-------e-P-~-~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~ 298 (393)
T 3u9i_A 229 TAPDALRLLDMLGVHGIVPALFE-------Q-P-V-AKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLN 298 (393)
T ss_dssp CHHHHHHHHHTTTTTTCCCSEEE-------C-C-S-CTTCTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CHHHHHHHHHHHhhCCCCeEEEE-------C-C-C-CCCcHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEE
Confidence 666677777878 666666552 1 1 1 22367888999999999999999999999999999777788887
Q ss_pred e
Q psy7343 361 T 361 (487)
Q Consensus 361 i 361 (487)
+
T Consensus 299 ~ 299 (393)
T 3u9i_A 299 I 299 (393)
T ss_dssp E
T ss_pred e
Confidence 5
No 354
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.39 E-value=0.12 Score=51.37 Aligned_cols=125 Identities=12% Similarity=0.105 Sum_probs=83.1
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYAR 292 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~ 292 (487)
|.+.+.+.++.+.+. |+ ..+..-|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.++
T Consensus 27 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~-~~t~~ai~la~ 96 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEV--------GC-EGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSA-PGFAAMRRLAR 96 (313)
T ss_dssp CHHHHHHHHHHHHHT--------TC-SEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCC-SSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC--------CC-CEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCC-CCHHHHHHHHH
Confidence 667777777766555 44 4455566677665445666667777766665 6899886511 24567889999
Q ss_pred HHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC--CcEEE------cCCCCCHHHHHHHHH
Q psy7343 293 MLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT--IPVIA------NGNIQCLADVEACLA 352 (487)
Q Consensus 293 ~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~--iPVi~------nGgI~s~~da~~~l~ 352 (487)
.+++.|+|++++..- ... .+....++.++.|.+.++ +||+. .|--.+++.+.++.+
T Consensus 97 ~A~~~Gadavlv~~P--~~~--~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 97 LSMDAGAAGVMIAPP--PSL--RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp HHHHHTCSEEEECCC--TTC--CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred HHHHcCCCEEEECCC--CCC--CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 999999999999321 110 111113477888888888 99875 365667888888764
No 355
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=95.31 E-value=0.12 Score=52.31 Aligned_cols=96 Identities=11% Similarity=0.087 Sum_probs=71.1
Q ss_pred ChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC
Q psy7343 255 DWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT 332 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~ 332 (487)
+++.-.+.++++++++ ++.+.+-.--+|+..+..++++.+++.|+.+|- | + ....+++..+++++.++
T Consensus 170 ~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------e-P--~~~~d~~~~~~l~~~~~ 239 (378)
T 4hpn_A 170 GVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGFGIDWFE-------E-P--VVPEQLDAYARVRAGQP 239 (378)
T ss_dssp CHHHHHHHHHHHHHHHTTTSEEEEECTTCCCHHHHHHHHHHHGGGCCSCEE-------C-C--SCTTCHHHHHHHHHHSS
T ss_pred ChHHHHHHHHHHHHhcCCcEEEEEecCcccCHHHHHHHHhhhhhcccchhh-------c-C--CCccchhhhHHHHhhCC
Confidence 3444456677777776 344444333356777888899999999887663 1 1 12347899999999999
Q ss_pred CcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 333 IPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 333 iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
+||.+.-.+.+..|+.++++...+|.++
T Consensus 240 ipIa~dE~~~~~~~~~~~i~~~a~d~i~ 267 (378)
T 4hpn_A 240 IPVAGGETWHGRYGMWQALSAGAVDILQ 267 (378)
T ss_dssp SCEEECTTCCHHHHHHHHHHTTCCSEEC
T ss_pred ceeeCCcCccchHhHHHHHHcCCCCEEe
Confidence 9999999999999999999777788774
No 356
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=95.28 E-value=0.05 Score=53.30 Aligned_cols=95 Identities=14% Similarity=0.157 Sum_probs=61.0
Q ss_pred HHHHHHHhhhcc-CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh-CCCcEEE
Q psy7343 260 TNLVSSLRQAVQ-VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA-LTIPVIA 337 (487)
Q Consensus 260 ~eiv~~v~~~~~-iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~-~~iPVi~ 337 (487)
.+.++.+++..+ .++.+-+ ++. +-++.+.++|+|.|++|.-+.. ...+.++.++.. .++++.+
T Consensus 182 ~~av~~ar~~~~~~~I~Vev------~t~-eea~eal~aGaD~I~LDn~~~~--------~~~~~v~~l~~~~~~v~iea 246 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEV------DSL-EQLDAVLPEKPELILLDNFAVW--------QTQTAVQRRDSRAPTVMLES 246 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEE------SSH-HHHHHHGGGCCSEEEEETCCHH--------HHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEe------CCH-HHHHHHHHcCCCEEEECCCCHH--------HHHHHHHHhhccCCCeEEEE
Confidence 445555555542 2566654 244 4445555689999999653211 112344444442 2689999
Q ss_pred cCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 338 NGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 338 nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+||| |.+.+.++. ++|+|.+.+|.....-|++
T Consensus 247 SGGI-t~~~i~~~a-~tGVD~isvG~l~~~a~~~ 278 (284)
T 1qpo_A 247 SGGL-SLQTAATYA-ETGVDYLAVGALTHSVRVL 278 (284)
T ss_dssp ESSC-CTTTHHHHH-HTTCSEEECGGGTSSBCCC
T ss_pred ECCC-CHHHHHHHH-hcCCCEEEECHHHcCCCCc
Confidence 9999 478888888 7999999999866655644
No 357
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.25 E-value=0.37 Score=45.45 Aligned_cols=118 Identities=17% Similarity=0.232 Sum_probs=75.0
Q ss_pred CCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc-cc----cccH
Q psy7343 213 NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY-QD----VNKT 287 (487)
Q Consensus 213 ~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~-~d----~~~~ 287 (487)
.++....++|+.+++. |. ..+.. + .++ .++++++.+++||+...|.. .+ +...
T Consensus 33 ~~~~~~~~~A~a~~~~--------Ga-~~i~~----~-----~~~----~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~ 90 (229)
T 3q58_A 33 DKPEIVAAMAQAAASA--------GA-VAVRI----E-----GIE----NLRTVRPHLSVPIIGIIKRDLTGSPVRITPY 90 (229)
T ss_dssp CSHHHHHHHHHHHHHT--------TC-SEEEE----E-----SHH----HHHHHGGGCCSCEEEECBCCCSSCCCCBSCS
T ss_pred CCcchHHHHHHHHHHC--------CC-cEEEE----C-----CHH----HHHHHHHhcCCCEEEEEeecCCCCceEeCcc
Confidence 3577888888888776 33 12221 1 233 35568889999998654431 11 1223
Q ss_pred HHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 288 VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 288 ~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
.+-++.+.++|+|.|.+... .... .....++++.+++ .++++++ ++.|.++++++. +.|+|.|.+
T Consensus 91 ~~~i~~~~~aGad~I~l~~~-~~~~----p~~l~~~i~~~~~-~g~~v~~--~v~t~eea~~a~-~~Gad~Ig~ 155 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDAS-FRSR----PVDIDSLLTRIRL-HGLLAMA--DCSTVNEGISCH-QKGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECC-SSCC----SSCHHHHHHHHHH-TTCEEEE--ECSSHHHHHHHH-HTTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECcc-ccCC----hHHHHHHHHHHHH-CCCEEEE--ecCCHHHHHHHH-hCCCCEEEe
Confidence 44456778899999988332 1111 1122366777765 4777776 799999999988 789999975
No 358
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=95.23 E-value=0.097 Score=53.51 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=82.4
Q ss_pred CeeeeeccCCHHHHHHHHHhh-CCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc-CcEEEEeeccc
Q psy7343 205 PLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VPVSCKIRIYQ 282 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~~~-~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iPV~vKiR~~~ 282 (487)
|+...+...+++++.+.++.. ++.+..+-+..|. ..+..|. +.++++++.++ +.+.+-..-+|
T Consensus 135 ~~~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~-----------~~~~~d~----~~v~avR~~~~~~~L~vDaN~~w 199 (389)
T 3s5s_A 135 TTDITITTGSPERAEEAARRAAAMGFRALKVKVGG-----------RLAASDP----ARIEAIHAAAPGASLILDGNGGL 199 (389)
T ss_dssp ECCEEECSSCSHHHHHHHHHHHHHTCCEEEEECCG-----------GGTTTHH----HHHHHHHHHCTTCEEEEECTTCS
T ss_pred EEEeeecCCCHHHHHHHHHHHHHcCCCeEEEEecC-----------CChHHHH----HHHHHHHHhCCCCeEEEECCCCC
Confidence 444445556777777666544 4446655554432 0122233 34555666652 23333222245
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+..+..++++.+++.+.+-..| +| + . ...+++..+++++.+++||.+.-.+.+..++.++++...+|.|++
T Consensus 200 ~~~~A~~~~~~L~~~~~~i~~i-----Ee-P-~-~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~ 270 (389)
T 3s5s_A 200 TAGEALALVAHARRLGADVALL-----EQ-P-V-PRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNI 270 (389)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE-----EC-C-S-CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHHHHhhCCCCeEEE-----EC-C-C-CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEe
Confidence 6667778888884333332233 12 1 1 234789999999999999999999999999999997777888876
No 359
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=95.22 E-value=0.11 Score=53.06 Aligned_cols=128 Identities=12% Similarity=0.209 Sum_probs=84.8
Q ss_pred Ceeeeec-cCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecc
Q psy7343 205 PLIIQFC-GNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIY 281 (487)
Q Consensus 205 Pv~Vqi~-g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~ 281 (487)
|+...+. +.+++++.+.++. +++.+..+.+..| | ..|. +.++++++++ ++.+.+-..-+
T Consensus 151 ~~~~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d~----~~v~avr~a~~~~~l~vDaN~~ 212 (393)
T 1wuf_A 151 KVGVSIGLQQNVETLLQLVNQYVDQGYERVKLKIA-P-------------NKDI----QFVEAVRKSFPKLSLMADANSA 212 (393)
T ss_dssp EBCEEECCCSCHHHHHHHHHHHHHHTCCEEEEECB-T-------------TBSH----HHHHHHHTTCTTSEEEEECTTC
T ss_pred eeeEEeCCCCCHHHHHHHHHHHHHHhhHhheeccC-h-------------HHHH----HHHHHHHHHcCCCEEEEECCCC
Confidence 4443343 3357777665554 4444666666533 1 1233 3456677665 33344433224
Q ss_pred cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 282 QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 282 ~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++. ++++.++++++..|-= + . ...+++..+++++.+++||.+.-.+.+..++.++++...+|.|++
T Consensus 213 ~~~~~a-~~~~~l~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~i 281 (393)
T 1wuf_A 213 YNREDF-LLLKELDQYDLEMIEQ--------P-F-GTKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINL 281 (393)
T ss_dssp CCGGGH-HHHHTTGGGTCSEEEC--------C-S-CSSCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHH-HHHHHHHhCCCeEEEC--------C-C-CCcCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEe
Confidence 666777 8889999998887741 1 1 234688899999999999999999999999999997666898876
No 360
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=95.19 E-value=0.16 Score=48.92 Aligned_cols=189 Identities=15% Similarity=0.094 Sum_probs=97.4
Q ss_pred CceEEecCCCCCCHH-HHHHHHHcCCCeEEccceeccccccCcHHHHHHhhhCCCCCceeeeeccccCCCCCcccccccc
Q psy7343 79 PRFILAPMVDASELP-WRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPMV 157 (487)
Q Consensus 79 ~~~~LAPMag~td~p-FR~l~~~~Gadl~~TEMi~a~~l~~~~~~~~~~~~~~~~e~p~~vQl~~~~~~g~~~~~lApma 157 (487)
.+++++||++.++.. .-..+.++|++.+++.. +++.... .....+.|+++|+... . .+ .|-
T Consensus 34 ~~~~l~p~~~~~~~~~~~~~~~~~g~~~i~~~~----~~~~~~~------~~~~~~~~~~v~~~~~----~-~~--~~d- 95 (273)
T 2qjg_A 34 HGVSNGPIKGLIDIRKTVNDVAEGGANAVLLHK----GIVRHGH------RGYGKDVGLIIHLSGG----T-AI--SPN- 95 (273)
T ss_dssp HHHHHCSCTTSSSHHHHHHHHHHHTCSEEEECH----HHHHSCC------CSSSCCCEEEEECEEC----C-TT--SSS-
T ss_pred cccccCCCcchhhHHHHHHHHHhcCCCEEEeCH----HHHHHHH------HhhcCCCCEEEEEcCC----C-cC--CCC-
Confidence 356689999999885 22334678998887643 2211110 0112356888886321 1 10 110
Q ss_pred CCCc--hHHHHHHHHhCCccc---eecc-ccchhhhcChhHHHHHHhc-CCCCCCeeeeec--------cCCHHHHHHHH
Q psy7343 158 DASE--LPWRLLSRRYGSHLC---YTPM-VSAHQFIADKKLRQEILMS-TPEDRPLIIQFC--------GNDSKNLTEAA 222 (487)
Q Consensus 158 ~~td--~~fr~i~~~~Ga~l~---~t~~-v~~~~Ll~~~~~~~~~l~~-~~~~~Pv~Vqi~--------g~d~~~~~~aa 222 (487)
..++ ..--..+.+.|++.. .... .....++.. ..++.+. ...+.|+++.+. +.+++...+++
T Consensus 96 ~~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~---~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a 172 (273)
T 2qjg_A 96 PLKKVIVTTVEEAIRMGADAVSIHVNVGSDEDWEAYRD---LGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAA 172 (273)
T ss_dssp TTCCEECSCHHHHHHTTCSEEEEEEEETSTTHHHHHHH---HHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHH
T ss_pred cccchHHHHHHHHHHcCCCEEEEEEecCCCCHHHHHHH---HHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHH
Confidence 0110 111123456787654 1110 011111111 2222221 122567777651 23556667776
Q ss_pred HhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccc-cccHHHHHHHHHHcCCc
Q psy7343 223 KLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQD-VNKTVEYARMLERAGCQ 300 (487)
Q Consensus 223 ~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d-~~~~~e~a~~le~~G~d 300 (487)
+.+++. .|.|-++. . .+++.+.++. +.+++||++.+.++.+ .++..+.++.+.++|++
T Consensus 173 ~~a~~~Gad~i~~~~------------~----~~~~~l~~i~----~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~ 232 (273)
T 2qjg_A 173 RLGAELGADIVKTSY------------T----GDIDSFRDVV----KGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAA 232 (273)
T ss_dssp HHHHHTTCSEEEECC------------C----SSHHHHHHHH----HHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHcCCCEEEECC------------C----CCHHHHHHHH----HhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCc
Confidence 777665 56655541 1 2577766644 4568999998744321 23344445555589999
Q ss_pred EEEEEcccc
Q psy7343 301 LLAVHGRTV 309 (487)
Q Consensus 301 ~I~VhgRt~ 309 (487)
+|.+ ||.-
T Consensus 233 gv~v-g~~i 240 (273)
T 2qjg_A 233 GVAV-GRNI 240 (273)
T ss_dssp EEEC-CHHH
T ss_pred EEEe-eHHh
Confidence 9999 7754
No 361
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=95.18 E-value=0.21 Score=48.38 Aligned_cols=150 Identities=14% Similarity=0.160 Sum_probs=83.4
Q ss_pred CCCchHHHHHHHHhCCccceeccccchhhhcChh----HHHHHH------hcCCCCCCeeeeec-c---CCHHHHHHHHH
Q psy7343 158 DASELPWRLLSRRYGSHLCYTPMVSAHQFIADKK----LRQEIL------MSTPEDRPLIIQFC-G---NDSKNLTEAAK 223 (487)
Q Consensus 158 ~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~----~~~~~l------~~~~~~~Pv~Vqi~-g---~d~~~~~~aa~ 223 (487)
.+-|..+..+..+.|.+.+.+.--.+...+-.++ -..+++ .......+|++-+- | .++++..+.+.
T Consensus 23 tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~ 102 (275)
T 1o66_A 23 TAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAA 102 (275)
T ss_dssp ECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHHH
Confidence 3456677788888888776543211111111110 122222 11122234555543 2 25777776555
Q ss_pred hhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc--------------c--ccc
Q psy7343 224 LAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ--------------D--VNK 286 (487)
Q Consensus 224 ~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~--------------d--~~~ 286 (487)
++.++ +++|.|--| +...+.++++.++ ++||...+.+.+ + .++
T Consensus 103 rl~kaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~ 162 (275)
T 1o66_A 103 ELMAAGAHMVKLEGG-------------------VWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA 162 (275)
T ss_dssp HHHHTTCSEEEEECS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGTTC-----------CHHH
T ss_pred HHHHcCCcEEEECCc-------------------HHHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeChHHHHH
Confidence 55445 444433322 1233444445443 889986665421 1 135
Q ss_pred HHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcC
Q psy7343 287 TVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANG 339 (487)
Q Consensus 287 ~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nG 339 (487)
..+-++.++++|++.|.+.+- + -+.+++|.+.+++|+|+-|
T Consensus 163 ~i~rA~a~~eAGA~~ivlE~v-----------p-~~~a~~it~~l~iP~igIG 203 (275)
T 1o66_A 163 LLNDAKAHDDAGAAVVLMECV-----------L-AELAKKVTETVSCPTIGIG 203 (275)
T ss_dssp HHHHHHHHHHTTCSEEEEESC-----------C-HHHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHHcCCcEEEEecC-----------C-HHHHHHHHHhCCCCEEEEC
Confidence 666778899999999998432 1 3678899999999999865
No 362
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=95.18 E-value=0.1 Score=51.79 Aligned_cols=85 Identities=21% Similarity=0.286 Sum_probs=57.6
Q ss_pred HHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEE
Q psy7343 260 TNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVI 336 (487)
Q Consensus 260 ~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi 336 (487)
.+.++++++.. ..++.+-+ ++..+ ++.+.++|+|.|++.. .+.+.++++.+.+ ++++.
T Consensus 219 ~~Av~~ar~~~p~~kIeVEV------dtlde-a~eAl~aGaD~I~LDn------------~~~~~l~~av~~l~~~v~ie 279 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVET------ETLAE-LEEAISAGADIIMLDN------------FSLEMMREAVKINAGRAALE 279 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEE------SSHHH-HHHHHHTTCSEEEEES------------CCHHHHHHHHHHHTTSSEEE
T ss_pred HHHHHHHHHhCCCCeEEEEE------CCHHH-HHHHHHcCCCEEEECC------------CCHHHHHHHHHHhCCCCeEE
Confidence 44555555544 34566644 34444 4444568999999942 1345566665554 78999
Q ss_pred EcCCCCCHHHHHHHHHhcCCcEEEecccc
Q psy7343 337 ANGNIQCLADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 337 ~nGgI~s~~da~~~l~~~Gad~VmiGRa~ 365 (487)
++|||+ .+.+.++. ++|+|.+.+|.--
T Consensus 280 aSGGIt-~~~I~~~a-~tGVD~isvGalt 306 (320)
T 3paj_A 280 NSGNIT-LDNLKECA-ETGVDYISVGALT 306 (320)
T ss_dssp EESSCC-HHHHHHHH-TTTCSEEECTHHH
T ss_pred EECCCC-HHHHHHHH-HcCCCEEEECcee
Confidence 999996 78888887 7999999999743
No 363
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.11 E-value=0.16 Score=50.11 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=66.9
Q ss_pred CChHHHHHHHHHHhhhccCcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccccCC-CCCCCCCC--CH-H---HHH
Q psy7343 254 DDWPLLTNLVSSLRQAVQVPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRTVDQ-RGMNTGLA--SW-E---HIT 325 (487)
Q Consensus 254 ~d~~~i~eiv~~v~~~~~iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt~~~-~g~~~g~~--~~-~---~i~ 325 (487)
-..+.+...++.|.+.+++||++-+..|. +..+..+.++.++++|+++|.+-+..... .|...|.. .. + .|+
T Consensus 72 vt~~em~~~~~~I~r~~~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~ 151 (305)
T 3ih1_A 72 VTSTEVAERARDLVRATDLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIK 151 (305)
T ss_dssp SCHHHHHHHHHHHHHHHCCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHH
Confidence 35677777777788888999999887653 44456777888999999999997654322 12222221 12 3 444
Q ss_pred HHHhhCCCcEEEcCCCCCH-----H----HHHHHHHhcCCcEEEe
Q psy7343 326 AVRKALTIPVIANGNIQCL-----A----DVEACLAQTGVAGVMT 361 (487)
Q Consensus 326 ~i~~~~~iPVi~nGgI~s~-----~----da~~~l~~~Gad~Vmi 361 (487)
.+++. ++++..++..... + +++.+ ++.|||+|.+
T Consensus 152 Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay-~eAGAD~i~~ 194 (305)
T 3ih1_A 152 AIKEV-APSLYIVARTDARGVEGLDEAIERANAY-VKAGADAIFP 194 (305)
T ss_dssp HHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHH-HHHTCSEEEE
T ss_pred HHHHc-CCCeEEEEeeccccccCHHHHHHHHHHH-HHcCCCEEEE
Confidence 44444 5666666555543 2 22222 3689999997
No 364
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=95.09 E-value=0.3 Score=47.56 Aligned_cols=94 Identities=19% Similarity=0.270 Sum_probs=58.4
Q ss_pred CHHHHHH-HHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc---------
Q psy7343 214 DSKNLTE-AAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ--------- 282 (487)
Q Consensus 214 d~~~~~~-aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~--------- 282 (487)
++++..+ +.+.++++ +++|.|--| +...+.++++.++ ++||..-+-+.+
T Consensus 110 s~~~a~~na~rl~~eaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ggf 169 (281)
T 1oy0_A 110 GPTAALAAATRFLKDGGAHAVKLEGG-------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGGF 169 (281)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEBS-------------------GGGHHHHHHHHHH-TCCEEEEEECCC---------
T ss_pred CHHHHHHHHHHHHHHhCCeEEEECCc-------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCCe
Confidence 5666555 66777766 444444322 1223344445443 788874332211
Q ss_pred -------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcC
Q psy7343 283 -------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANG 339 (487)
Q Consensus 283 -------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nG 339 (487)
..++..+-++.++++|++.|.+.+- + -+.+++|.+.+++|+|+-|
T Consensus 170 ~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v-----------p-~~~a~~it~~l~iP~igIG 221 (281)
T 1oy0_A 170 RVQGRGDAAEQTIADAIAVAEAGAFAVVMEMV-----------P-AELATQITGKLTIPTVGIG 221 (281)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCSEEEEESC-----------C-HHHHHHHHHHCSSCEEEES
T ss_pred EEEeCcHHHHHHHHHHHHHHHcCCcEEEEecC-----------C-HHHHHHHHHhCCCCEEEeC
Confidence 1235666778899999999999432 1 3678899999999999865
No 365
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=95.08 E-value=0.072 Score=52.10 Aligned_cols=91 Identities=15% Similarity=0.107 Sum_probs=59.3
Q ss_pred HHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEE
Q psy7343 260 TNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVI 336 (487)
Q Consensus 260 ~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi 336 (487)
.+.++.+++.. ..|+.+-. ++. +-++.+.++|+|.|++..- ..+.++++.+.+ ++++.
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv------~tl-~ea~eAl~aGaD~I~LDn~------------~~~~l~~av~~~~~~v~ie 246 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEV------TNL-DELNQAIAAKADIVMLDNF------------SGEDIDIAVSIARGKVALE 246 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEE------SSH-HHHHHHHHTTCSEEEEESC------------CHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEEe------CCH-HHHHHHHHcCCCEEEEcCC------------CHHHHHHHHHhhcCCceEE
Confidence 34445555442 35666654 344 4445555689999999421 234555555544 78999
Q ss_pred EcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 337 ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 337 ~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++||| +.+.+.++. ++|+|.+.+|.-...-|++
T Consensus 247 aSGGI-t~~~i~~~a-~tGVD~IsvGalt~sa~~l 279 (287)
T 3tqv_A 247 VSGNI-DRNSIVAIA-KTGVDFISVGAITKHIKAI 279 (287)
T ss_dssp EESSC-CTTTHHHHH-TTTCSEEECSHHHHSBCCC
T ss_pred EECCC-CHHHHHHHH-HcCCCEEEEChhhcCCccc
Confidence 99999 577888887 8999999998654443443
No 366
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=94.97 E-value=0.4 Score=46.87 Aligned_cols=145 Identities=16% Similarity=0.206 Sum_probs=91.9
Q ss_pred CCCCeeeeec-cCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEE-ee
Q psy7343 202 EDRPLIIQFC-GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCK-IR 279 (487)
Q Consensus 202 ~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vK-iR 279 (487)
.+.||.+.+. |.+.+...++.+ ..|+-| -..+. --.+..|-+...++++.... .++.|-+- ++
T Consensus 79 ~~VPValHlDHg~~~e~i~~ai~---~GFtSV----------MiDgS-~~p~eeNi~~Tk~vv~~ah~-~gvsVEaElG~ 143 (288)
T 3q94_A 79 ITVPVAIHLDHGSSFEKCKEAID---AGFTSV----------MIDAS-HHPFEENVETTKKVVEYAHA-RNVSVEAELGT 143 (288)
T ss_dssp CCSCEEEEEEEECSHHHHHHHHH---HTCSEE----------EECCT-TSCHHHHHHHHHHHHHHHHT-TTCEEEEEESB
T ss_pred CCCcEEEECCCCCCHHHHHHHHH---cCCCeE----------EEeCC-CCCHHHHHHHHHHHHHHHHH-cCCeEEEEeee
Confidence 4689999998 666655444433 223222 22211 11224456667777765543 46666654 33
Q ss_pred cccc----------cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCC--CCHHHHHHHHhhCCCcEEEcCCCCCH-HH
Q psy7343 280 IYQD----------VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL--ASWEHITAVRKALTIPVIANGNIQCL-AD 346 (487)
Q Consensus 280 ~~~d----------~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~--~~~~~i~~i~~~~~iPVi~nGgI~s~-~d 346 (487)
+|+. ..++++..+..+++|+|.+.+.=.|.-+ .|.|. -+++.+++|++.+++|++.-||=..+ ++
T Consensus 144 vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG--~Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~ 221 (288)
T 3q94_A 144 VGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHG--PYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTAD 221 (288)
T ss_dssp CBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSS--CCSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHH
T ss_pred eccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccC--CcCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHH
Confidence 3321 1467888888999999999883233222 25443 47899999999999999987765544 46
Q ss_pred HHHHHHhcCCcEEEeccc
Q psy7343 347 VEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 347 a~~~l~~~Gad~VmiGRa 364 (487)
+.+++ ..|+.-|=|++.
T Consensus 222 i~~ai-~~Gv~KiNi~Td 238 (288)
T 3q94_A 222 IEKAI-SLGTSKINVNTE 238 (288)
T ss_dssp HHHHH-HTTEEEEEECHH
T ss_pred HHHHH-HcCCeEEEEChH
Confidence 88888 788888877764
No 367
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.92 E-value=0.19 Score=49.51 Aligned_cols=86 Identities=21% Similarity=0.226 Sum_probs=59.6
Q ss_pred cHHHHHHHHHHcCCcEEEEEcccc-CCCCCCCC---CCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTV-DQRGMNTG---LASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~-~~~g~~~g---~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
...+.++..++.|++.|++--+.. ... .+.| ..+.+.++++++.+++||++-+++...++++.+. ..|||.| -
T Consensus 29 ~~~e~A~~ye~~GA~~lsvLe~~~~Di~-~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~-aaGAD~I-d 105 (297)
T 4adt_A 29 KNVEQAKIAEKAGAIGVMILENIPSELR-NTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILE-ELKVDML-D 105 (297)
T ss_dssp SSHHHHHHHHHHTCSEEEECCCCC------CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHH-HTTCSEE-E
T ss_pred CcHHHHHHHHHcCCCEEEEecCCCCcch-hcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHH-HcCCCEE-E
Confidence 345889999999999999952211 111 1122 3478999999999999999987888877777776 7999999 2
Q ss_pred ccccccCcccccC
Q psy7343 362 AEGNLYNPALFTG 374 (487)
Q Consensus 362 GRa~l~~P~lf~~ 374 (487)
....+..+.++..
T Consensus 106 ~s~~~~~~~li~~ 118 (297)
T 4adt_A 106 ESEVLTMADEYNH 118 (297)
T ss_dssp EETTSCCSCSSCC
T ss_pred cCCCCCHHHHHHH
Confidence 2222344556543
No 368
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=94.89 E-value=0.12 Score=50.42 Aligned_cols=119 Identities=17% Similarity=0.156 Sum_probs=78.9
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARM 293 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~ 293 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.++- |++.+- ..+..+..+.++.
T Consensus 17 D~~~l~~lv~~li~~--------Gv-~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg-~~~t~~ai~la~~ 85 (286)
T 2r91_A 17 DPELFANHVKNITSK--------GV-DVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVA-SLNADEAIALAKY 85 (286)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECC-CSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeC-CCCHHHHHHHHHH
Confidence 677777777765555 44 445566667776544667777888888777654 666541 1244578888999
Q ss_pred HHHcCCcEEEEEccccCCCCCCCC-CC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHH
Q psy7343 294 LERAGCQLLAVHGRTVDQRGMNTG-LA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEA 349 (487)
Q Consensus 294 le~~G~d~I~VhgRt~~~~g~~~g-~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~ 349 (487)
+++.|+|++++..- .|.. +. .++.++.|.+++++||+. | |--.+++.+.+
T Consensus 86 A~~~Gadavlv~~P------~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 86 AESRGAEAVASLPP------YYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHTTCSEEEECCS------CSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHhcCCCEEEEcCC------cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 99999999999322 1322 22 246778888889999874 4 43356666665
No 369
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=94.88 E-value=0.28 Score=47.34 Aligned_cols=116 Identities=17% Similarity=0.184 Sum_probs=73.8
Q ss_pred ccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCC-CCCCHHHHHHHH
Q psy7343 250 AYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT-GLASWEHITAVR 328 (487)
Q Consensus 250 ~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~-g~~~~~~i~~i~ 328 (487)
+....+.+++.++. + ++.||.+|-....+.++..+.++.+...|...+++-=|+......|. ...++..+..++
T Consensus 114 a~~~~n~~ll~~~a----~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk 188 (262)
T 1zco_A 114 ARNSQNFELLKEVG----K-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVK 188 (262)
T ss_dssp GGGTTCHHHHHHHT----T-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHH
T ss_pred cccccCHHHHHHHH----h-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHH
Confidence 33445777766643 2 69999999755556778888889999999865555334321111232 234667888899
Q ss_pred hhCCCcEEEcCCCCCHH-----H-HHHHHHhcCCcEEEeccccccCccc
Q psy7343 329 KALTIPVIANGNIQCLA-----D-VEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 329 ~~~~iPVi~nGgI~s~~-----d-a~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+..++||++.-+-.+.. . +.... ..|++|+||=+-+--|-.+
T Consensus 189 ~~~~~pVi~d~sH~~g~~~~v~~~~~aAv-a~Ga~Gl~iE~H~~~d~al 236 (262)
T 1zco_A 189 ELSHLPIIVDPSHPAGRRSLVIPLAKAAY-AIGADGIMVEVHPEPEKAL 236 (262)
T ss_dssp HHBSSCEEECSSTTTCSGGGHHHHHHHHH-HTTCSEEEEEBCSSGGGCS
T ss_pred hhhCCCEEEEcCCCCCccchHHHHHHHHH-HcCCCEEEEEecCCccccC
Confidence 98899997643332221 2 33344 6899999998865444444
No 370
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=94.85 E-value=0.13 Score=52.93 Aligned_cols=123 Identities=11% Similarity=0.145 Sum_probs=81.4
Q ss_pred cCCHHHHHHHHHhhC-CcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 212 GNDSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 212 g~d~~~~~~aa~~~~-~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
..+++...+.++... +.+..+-+..|. +++...+.++++++++ ++.+.+..--+|+..+..
T Consensus 186 ~~~~~~~~~~a~~~~~~G~~~~K~k~g~----------------~~~~~~~~v~~vR~~~g~~~~l~vDaN~~~~~~~A~ 249 (412)
T 4h1z_A 186 EDTRAKRAELAAAWQAKGFSSFKFASPV----------------ADDGVAKEMEILRERLGPAVRIACDMHWAHTASEAV 249 (412)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEEGGG----------------CTTCHHHHHHHHHHHHCSSSEEEEECCSCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHhcCcceecccccc----------------chhhHHHHHHHHHhccCCeEEEEeccccCCCHHHHH
Confidence 345677777665544 345554443221 1122233455666665 344555433356777888
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
++++.+++.|+..+- | + ....+++..+++++.+++||.+.-.+.+..|+.++++...+|.++
T Consensus 250 ~~~~~l~~~~l~~iE-------q-P--~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~ 311 (412)
T 4h1z_A 250 ALIKAMEPHGLWFAE-------A-P--VRTEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQ 311 (412)
T ss_dssp HHHHHHGGGCEEEEE-------C-C--SCTTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEEC
T ss_pred HHHHhhcccccceec-------C-C--CCccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEE
Confidence 899999998876552 1 1 123478999999999999999999999999999999766677664
No 371
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.81 E-value=0.11 Score=49.38 Aligned_cols=97 Identities=19% Similarity=0.247 Sum_probs=69.2
Q ss_pred HHHHHHHHHhhhccCcEEEEeeccc-----ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC
Q psy7343 258 LLTNLVSSLRQAVQVPVSCKIRIYQ-----DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT 332 (487)
Q Consensus 258 ~i~eiv~~v~~~~~iPV~vKiR~~~-----d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~ 332 (487)
.+..+++.+...- .+++..+... +.+...++++.+++.|+.+|.+ + ..+.++++++.++
T Consensus 6 ~~~~~~~~~~~~~--~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~-~-------------~~~~i~~ir~~v~ 69 (232)
T 3igs_A 6 LLEQLDKNIAASG--GLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRI-E-------------GIDNLRMTRSLVS 69 (232)
T ss_dssp HHHHHHHHHHHHC--CEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEE-E-------------SHHHHHHHHTTCC
T ss_pred HHHHHHHHhhhcC--CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEE-C-------------CHHHHHHHHHhcC
Confidence 4455555552222 3555544422 2346789999999999999887 1 2578999999999
Q ss_pred CcEEE-c----CC--C---CCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 333 IPVIA-N----GN--I---QCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 333 iPVi~-n----Gg--I---~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+||++ + || + .+.+++.+++ +.|||.|.++.+...+|..
T Consensus 70 ~Pvig~~k~d~~~~~~~I~~~~~~i~~~~-~~Gad~V~l~~~~~~~p~~ 117 (232)
T 3igs_A 70 VPIIGIIKRDLDESPVRITPFLDDVDALA-QAGAAIIAVDGTARQRPVA 117 (232)
T ss_dssp SCEEEECBCCCSSCCCCBSCSHHHHHHHH-HHTCSEEEEECCSSCCSSC
T ss_pred CCEEEEEeecCCCcceEeCccHHHHHHHH-HcCCCEEEECccccCCHHH
Confidence 99985 1 33 3 4667888888 7899999999888878854
No 372
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=94.80 E-value=0.19 Score=51.30 Aligned_cols=126 Identities=10% Similarity=0.067 Sum_probs=82.7
Q ss_pred cCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHH
Q psy7343 212 GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTV 288 (487)
Q Consensus 212 g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~ 288 (487)
+.+.+.+.+.++.+.+ .+..+-+..|. .+++.-.+.++++++++ ++.+.+-.--+|+..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~G~~~~Kikvg~---------------~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~A~ 226 (388)
T 4h83_A 162 GEPLGSIADEMHNYQELGLAGVKFKVGG---------------LSAAEDAARITAAREAAGDDFIICIDANQGYKPAVAV 226 (388)
T ss_dssp TCTTCSHHHHHHHHHHHTBSEEEEECSS---------------SCHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCceEeecCCC---------------CCHHHHHHHHHHHHHhcCCCeEEEEecCcCCCHHHHH
Confidence 3344556655554443 46555554322 13333345566777776 345554433356777788
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++++.+++.++.+|- | + .....+++..+++++.+++||.+.-.+.+..|+.++++...+|.+++
T Consensus 227 ~~~~~l~~~~~~~iE-------e-P-~~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 290 (388)
T 4h83_A 227 DLSRRIADLNIRWFE-------E-P-VEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNF 290 (388)
T ss_dssp HHHHHTTTSCCCCEE-------S-C-BCSTTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECC
T ss_pred HHHHHhhhcCcceee-------c-C-cccccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEee
Confidence 888999888877652 2 1 22223578889999999999999999999999999997666887753
No 373
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.79 E-value=0.25 Score=49.69 Aligned_cols=129 Identities=19% Similarity=0.132 Sum_probs=82.8
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARM 293 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~ 293 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++. ...-.+||++.+-- .+..+..+.++.
T Consensus 45 D~~~l~~lv~~li~~--------Gv-~Gl~v~GtTGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg~-~st~eai~la~~ 113 (344)
T 2hmc_A 45 DFDALVRKGKELIAD--------GM-SAVVYCGSMGDWPLLTDEQRMEGVER-LVKAGIPVIVGTGA-VNTASAVAHAVH 113 (344)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CCEEESSGGGTGGGSCHHHHHHHHHH-HHHTTCCEEEECCC-SSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEeCccCcChhhCCHHHHHHHHHH-HhCCCCcEEEecCC-CCHHHHHHHHHH
Confidence 667777777765555 44 45566676777654455555666665 22236899987611 144578888999
Q ss_pred HHHcCCcEEEEEccccCCCCCCCC-CC---CHHHHHHHHh-hCCCcEEE-c----CCCCCHHHHHHH-HHhcCCcEE
Q psy7343 294 LERAGCQLLAVHGRTVDQRGMNTG-LA---SWEHITAVRK-ALTIPVIA-N----GNIQCLADVEAC-LAQTGVAGV 359 (487)
Q Consensus 294 le~~G~d~I~VhgRt~~~~g~~~g-~~---~~~~i~~i~~-~~~iPVi~-n----GgI~s~~da~~~-l~~~Gad~V 359 (487)
+++.|+|++++..- .|.. +. .++.++.|.+ .+++||+. | |--.+++.+.++ .+...+-|+
T Consensus 114 A~~~Gadavlv~~P------~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~~pnIvGi 184 (344)
T 2hmc_A 114 AQKVGAKGLMVIPR------VLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAEHKNLVGF 184 (344)
T ss_dssp HHHHTCSEEEECCC------CSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHHCTTEEEE
T ss_pred HHhcCCCEEEECCC------ccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhcCCCEEEE
Confidence 99999999999321 1322 21 2477788888 78999864 5 544688888888 543333333
No 374
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.76 E-value=0.036 Score=55.95 Aligned_cols=83 Identities=24% Similarity=0.360 Sum_probs=55.5
Q ss_pred CCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccc---cCChHHHHHHHHHHhhhccCcEEEE
Q psy7343 202 EDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYL---QDDWPLLTNLVSSLRQAVQVPVSCK 277 (487)
Q Consensus 202 ~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l---~~d~~~i~eiv~~v~~~~~iPV~vK 277 (487)
.+.||++|... +. +.|+.+++. +|+|.+.. || |.++ ...++.+.++.+++.. ++||++.
T Consensus 216 ~~~PvivK~v~-~~----e~A~~a~~~GaD~I~vsn--------~G--G~~~d~~~~~~~~L~~i~~av~~--~ipVia~ 278 (352)
T 3sgz_A 216 TRLPIILKGIL-TK----EDAELAMKHNVQGIVVSN--------HG--GRQLDEVSASIDALREVVAAVKG--KIEVYMD 278 (352)
T ss_dssp CCSCEEEEEEC-SH----HHHHHHHHTTCSEEEECC--------GG--GTSSCSSCCHHHHHHHHHHHHTT--SSEEEEE
T ss_pred cCCCEEEEecC-cH----HHHHHHHHcCCCEEEEeC--------CC--CCccCCCccHHHHHHHHHHHhCC--CCeEEEE
Confidence 36899999763 33 334555554 77776631 11 2122 2345666666555432 6899999
Q ss_pred eecccccccHHHHHHHHHHcCCcEEEEEcc
Q psy7343 278 IRIYQDVNKTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 278 iR~~~d~~~~~e~a~~le~~G~d~I~VhgR 307 (487)
+ ++.+..++++.+. .|+|+|+| ||
T Consensus 279 G----GI~~g~Dv~kaLa-lGA~aV~i-Gr 302 (352)
T 3sgz_A 279 G----GVRTGTDVLKALA-LGARCIFL-GR 302 (352)
T ss_dssp S----SCCSHHHHHHHHH-TTCSEEEE-SH
T ss_pred C----CCCCHHHHHHHHH-cCCCEEEE-CH
Confidence 7 8889999999987 79999999 77
No 375
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=94.75 E-value=0.12 Score=50.51 Aligned_cols=120 Identities=11% Similarity=0.032 Sum_probs=79.2
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARM 293 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~ 293 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.++- |++.+- +.+..+..+.++.
T Consensus 18 D~~~l~~lv~~li~~--------Gv-~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~la~~ 86 (288)
T 2nuw_A 18 NVDALKTHAKNLLEK--------GI-DAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVMELVKF 86 (288)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHHHHHH
Confidence 667777777765555 44 445566667776545677778888888877654 666541 1144578888999
Q ss_pred HHHcCCcEEEEEccccCCCCCCCC-CC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHH
Q psy7343 294 LERAGCQLLAVHGRTVDQRGMNTG-LA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEAC 350 (487)
Q Consensus 294 le~~G~d~I~VhgRt~~~~g~~~g-~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~ 350 (487)
+++.|+|++++..- .|.. +. .++.++.|.+.+++||+. | |--.+++.+.++
T Consensus 87 A~~~Gadavlv~~P------~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 87 SNEMDILGVSSHSP------YYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp HHTSCCSEEEECCC------CSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred HHhcCCCEEEEcCC------cCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 99999999999322 1322 22 246778888889999864 4 433466655554
No 376
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=94.74 E-value=0.13 Score=50.38 Aligned_cols=91 Identities=11% Similarity=0.068 Sum_probs=57.7
Q ss_pred HHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEE
Q psy7343 260 TNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVI 336 (487)
Q Consensus 260 ~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi 336 (487)
.+.++.+++.. ..|+.+-. ++..+ ++.+.++|+|.||+..- ..+.++++.+.+ ++.+.
T Consensus 195 ~~Av~~ar~~~p~~kIeVEv------~tl~e-~~eAl~aGaDiImLDn~------------s~~~l~~av~~~~~~v~le 255 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAIEC------DNISQ-VEESLSNNVDMILLDNM------------SISEIKKAVDIVNGKSVLE 255 (300)
T ss_dssp HHHHHHHHHHSSSCCEEEEE------SSHHH-HHHHHHTTCSEEEEESC------------CHHHHHHHHHHHTTSSEEE
T ss_pred HHHHHHHHHhCCCCCEEEEE------CCHHH-HHHHHHcCCCEEEECCC------------CHHHHHHHHHhhcCceEEE
Confidence 44555555543 34555543 34444 44455689999999321 234444444433 68899
Q ss_pred EcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 337 ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 337 ~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++||| |.+.+.++. ++|+|.+.+|.-...-|++
T Consensus 256 aSGGI-t~~~i~~~A-~tGVD~IsvGalthsa~~l 288 (300)
T 3l0g_A 256 VSGCV-NIRNVRNIA-LTGVDYISIGCITNSFQNK 288 (300)
T ss_dssp EESSC-CTTTHHHHH-TTTCSEEECGGGTSSCCCC
T ss_pred EECCC-CHHHHHHHH-HcCCCEEEeCccccCCCcc
Confidence 99999 577888887 8999999999644333443
No 377
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=94.72 E-value=0.095 Score=51.52 Aligned_cols=91 Identities=13% Similarity=0.134 Sum_probs=58.2
Q ss_pred HHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEE
Q psy7343 260 TNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVI 336 (487)
Q Consensus 260 ~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi 336 (487)
.+.++++++.. ..++.+-+ ++..++ +.+.++|+|.|++..- +.+.++++.+.+ ++++.
T Consensus 197 ~~Av~~~r~~~p~~~ieVEv------dtlde~-~eAl~aGaD~I~LDn~------------~~~~l~~av~~i~~~v~ie 257 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIEV------ETLDQL-RTALAHGARSVLLDNF------------TLDMMRDAVRVTEGRAVLE 257 (298)
T ss_dssp HHHHHHHHHHC--CCCEEEE------SSHHHH-HHHHHTTCEEEEEESC------------CHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEe------CCHHHH-HHHHHcCCCEEEECCC------------CHHHHHHHHHHhCCCCeEE
Confidence 34455555543 24444443 345444 4445589999999421 234455544433 68899
Q ss_pred EcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 337 ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 337 ~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++||| +.+.+.++. ++|+|.+.+|.....-|++
T Consensus 258 aSGGI-~~~~i~~~a-~tGVD~isvG~lt~sa~~l 290 (298)
T 3gnn_A 258 VSGGV-NFDTVRAIA-ETGVDRISIGALTKDVRAT 290 (298)
T ss_dssp EESSC-STTTHHHHH-HTTCSEEECGGGGTSCCCC
T ss_pred EEcCC-CHHHHHHHH-HcCCCEEEECCeecCCCcc
Confidence 99999 567788887 7999999999865544544
No 378
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.62 E-value=0.065 Score=56.64 Aligned_cols=69 Identities=22% Similarity=0.382 Sum_probs=54.7
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCC--CHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLA--SWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~--~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
+..+-++.|.++|+|.|.|..- .|.. -.+.++.+++.. +++||+ |+|.|.+.++.++ +.|||+|-+|
T Consensus 281 d~~eR~~aLv~AGvD~iviD~a--------hGhs~~v~~~i~~ik~~~p~~~via-GNVaT~e~a~~Li-~aGAD~vkVG 350 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSS--------QGNSVYQIEFIKWIKQTYPKIDVIA-GNVVTREQAAQLI-AAGADGLRIG 350 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCS--------CCCSHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHH-HHTCSEEEEC
T ss_pred cHHHHHHHHHhcCCcEEEEecc--------ccccHHHHHHHHHHHhhCCcceEEe-ccccCHHHHHHHH-HcCCCEEeec
Confidence 4677788899999999999211 1211 258889999887 788887 9999999999999 7999999987
Q ss_pred cc
Q psy7343 363 EG 364 (487)
Q Consensus 363 Ra 364 (487)
-|
T Consensus 351 iG 352 (556)
T 4af0_A 351 MG 352 (556)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 379
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=94.59 E-value=0.67 Score=45.26 Aligned_cols=144 Identities=17% Similarity=0.269 Sum_probs=89.6
Q ss_pred CCCeeeeec-cCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEe-ec
Q psy7343 203 DRPLIIQFC-GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI-RI 280 (487)
Q Consensus 203 ~~Pv~Vqi~-g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi-R~ 280 (487)
..||.+.+. |.+.+...++.+ ..|.- +-..+. --.+..|-+...++++.... .++.|-+-+ ++
T Consensus 74 ~VPValHlDHg~~~e~i~~ai~---~GFtS----------VMiDgS-~lp~eeNi~~Tk~vv~~ah~-~gvsVEaElG~v 138 (286)
T 1gvf_A 74 NMPLALHLDHHESLDDIRRKVH---AGVRS----------AMIDGS-HFPFAENVKLVKSVVDFCHS-QDCSVEAELGRL 138 (286)
T ss_dssp TSCBEEEEEEECCHHHHHHHHH---TTCCE----------EEECCT-TSCHHHHHHHHHHHHHHHHH-TTCEEEEEESCC
T ss_pred CCcEEEEcCCCCCHHHHHHHHH---cCCCe----------EEECCC-CCCHHHHHHHHHHHHHHHHH-cCCEEEEEEeec
Confidence 579999988 666554444432 22322 222221 11224556667777765543 366665543 22
Q ss_pred cc--c----------cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCC--CCHHHHHHHHhhCCCcEEEcCCCCC-HH
Q psy7343 281 YQ--D----------VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL--ASWEHITAVRKALTIPVIANGNIQC-LA 345 (487)
Q Consensus 281 ~~--d----------~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~--~~~~~i~~i~~~~~iPVi~nGgI~s-~~ 345 (487)
|+ | ..++++..+..+++|+|.+.+.=.|.-+ .|.|. -+++.+++|++.+++|++.-||=.. .+
T Consensus 139 gg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG--~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e 216 (286)
T 1gvf_A 139 GGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHG--LYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDE 216 (286)
T ss_dssp C-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSS--CCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHH
T ss_pred cCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCcccc--CcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHH
Confidence 22 1 1467888888999999999883233222 25443 4679999999999999998775544 45
Q ss_pred HHHHHHHhcCCcEEEeccc
Q psy7343 346 DVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 346 da~~~l~~~Gad~VmiGRa 364 (487)
++.+++ ..|+.-|=|++.
T Consensus 217 ~i~~ai-~~Gv~KiNi~Td 234 (286)
T 1gvf_A 217 FVRRTI-ELGVTKVNVATE 234 (286)
T ss_dssp HHHHHH-HTTEEEEEECHH
T ss_pred HHHHHH-HCCCeEEEEChH
Confidence 688888 688888877763
No 380
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=94.57 E-value=0.13 Score=52.45 Aligned_cols=83 Identities=11% Similarity=0.003 Sum_probs=59.5
Q ss_pred CeeeeeccC----------CHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCc
Q psy7343 205 PLIIQFCGN----------DSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVP 273 (487)
Q Consensus 205 Pv~Vqi~g~----------d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iP 273 (487)
||+++|... +.+++.++++.+++. .|.|++..+. .. .. + . +. + ++.+++.+++|
T Consensus 245 ~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-~~----~~-~---~--~~---~-~~~ir~~~~iP 309 (379)
T 3aty_A 245 RVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGD-MV----NQ-Q---I--GD---V-VAWVRGSYSGV 309 (379)
T ss_dssp GEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSC-TT----SC-C---C--CC---H-HHHHHTTCCSC
T ss_pred eEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCC-cC----CC-C---c--cH---H-HHHHHHHCCCc
Confidence 799988742 346778889988887 8999888653 10 00 0 1 11 4 56688888999
Q ss_pred EEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 274 VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 274 V~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
|++++ ++ +..++.+.+++.++|.|++ ||.
T Consensus 310 vi~~G----~i-t~~~a~~~l~~g~aD~V~i-gR~ 338 (379)
T 3aty_A 310 KISNL----RY-DFEEADQQIREGKVDAVAF-GAK 338 (379)
T ss_dssp EEEES----SC-CHHHHHHHHHTTSCSEEEE-SHH
T ss_pred EEEEC----CC-CHHHHHHHHHcCCCeEEEe-cHH
Confidence 99998 44 5677777777767999999 885
No 381
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=94.57 E-value=0.23 Score=47.87 Aligned_cols=151 Identities=22% Similarity=0.216 Sum_probs=82.5
Q ss_pred CCCchHHHHHHHHhCCccceeccccchhhhcChh----HHHHHH------hcCCCCCCeeeeec-c--CCHHHHHHHHHh
Q psy7343 158 DASELPWRLLSRRYGSHLCYTPMVSAHQFIADKK----LRQEIL------MSTPEDRPLIIQFC-G--NDSKNLTEAAKL 224 (487)
Q Consensus 158 ~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~----~~~~~l------~~~~~~~Pv~Vqi~-g--~d~~~~~~aa~~ 224 (487)
.+-|..+..+..+.|.+.+.+.--.+...+-.++ -..+++ .......+|++-+- | .++++..+.+.+
T Consensus 23 tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~r 102 (264)
T 1m3u_A 23 TAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAAT 102 (264)
T ss_dssp ECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHH
Confidence 3456777788888898877653211111111110 012222 11122234555543 2 167766665555
Q ss_pred hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc--------------c---cccH
Q psy7343 225 AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ--------------D---VNKT 287 (487)
Q Consensus 225 ~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~--------------d---~~~~ 287 (487)
+.++ |+ ..+...|. +...+.++++.++ ++||..-+-+.+ + .++.
T Consensus 103 l~ka--------Ga-~aVklEgg---------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~ 163 (264)
T 1m3u_A 103 VMRA--------GA-NMVKIEGG---------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQL 163 (264)
T ss_dssp HHHT--------TC-SEEECCCS---------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHH
T ss_pred HHHc--------CC-CEEEECCc---------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEEeCCHHHHHHH
Confidence 5445 33 22222221 1233444555543 799985443321 1 1345
Q ss_pred HHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcC
Q psy7343 288 VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANG 339 (487)
Q Consensus 288 ~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nG 339 (487)
.+-++.++++|++.|.+.+- + -+.+++|.+.+++|+|+-|
T Consensus 164 i~rA~a~~eAGA~~ivlE~v-----------p-~~~a~~it~~l~iP~igIG 203 (264)
T 1m3u_A 164 LSDALALEAAGAQLLVLECV-----------P-VELAKRITEALAIPVIGIG 203 (264)
T ss_dssp HHHHHHHHHHTCCEEEEESC-----------C-HHHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHCCCcEEEEecC-----------C-HHHHHHHHHhCCCCEEEeC
Confidence 67778899999999998432 1 3678899999999999865
No 382
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=94.56 E-value=0.1 Score=54.80 Aligned_cols=70 Identities=24% Similarity=0.315 Sum_probs=56.5
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
...+.++.+.+.|+|.|.+++- . + .. ...++.++++++.+ ++|++ .|+|.+.+++.+++ +.|+|+|.+|.
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a-~---g-~~-~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~-~~Gad~I~vg~ 303 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTA-H---G-HS-AGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALY-DAGVDVVKVGI 303 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCS-C---T-TC-HHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHH-HTTCSEEEECS
T ss_pred hHHHHHHHHHHcCCCeEEEeee-c---C-cc-hhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHH-HcCCCEEEECc
Confidence 4567788889999999999651 1 1 11 12468899999998 89999 79999999999998 79999999985
No 383
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.48 E-value=0.12 Score=53.07 Aligned_cols=65 Identities=20% Similarity=0.439 Sum_probs=52.2
Q ss_pred HHHHHHHHHcCCcEEEEEccccCCCCCCCCCC--CHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 288 VEYARMLERAGCQLLAVHGRTVDQRGMNTGLA--SWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 288 ~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~--~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
.+.++.+.++|+|.|.+. -+ .|.. ..+.++++++..++||++ |++.|.++++.+. +.|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvld-ta-------~G~~~~~~e~I~~ik~~~~i~Vi~-g~V~t~e~A~~a~-~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLD-SA-------HGHSLNIIRTLKEIKSKMNIDVIV-GNVVTEEATKELI-ENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEEC-CS-------CCSBHHHHHHHHHHHTTCCCEEEE-EEECSHHHHHHHH-HTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEe-CC-------CCCcccHHHHHHHHHhcCCCeEEE-eecCCHHHHHHHH-HcCCCEEEEe
Confidence 678889999999999882 11 1112 257888999888999987 7899999999988 7899999996
No 384
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=94.38 E-value=0.089 Score=53.03 Aligned_cols=119 Identities=13% Similarity=0.039 Sum_probs=70.8
Q ss_pred hhhhcChhHHHHHHh--cCCCCCCeeeeecc-CCHHHHHHHHHhhCCc--CcEEEeecCC---------CcceeeccC--
Q psy7343 184 HQFIADKKLRQEILM--STPEDRPLIIQFCG-NDSKNLTEAAKLAEPH--CDGIDINIGC---------PQMVAKRGH-- 247 (487)
Q Consensus 184 ~~Ll~~~~~~~~~l~--~~~~~~Pv~Vqi~g-~d~~~~~~aa~~~~~~--~d~IdiN~Gc---------P~~i~~~gr-- 247 (487)
..+..+++...++++ ......|+.+|+.. .+.......+..+.+. .+.+..+-+. ......+.+
T Consensus 172 ~~l~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~ 251 (354)
T 3tjx_A 172 PQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQG 251 (354)
T ss_dssp --CTTSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGG
T ss_pred hhhccCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCccc
Confidence 345567777766664 23346899999984 3444444444443332 3333322111 001111111
Q ss_pred ccc-cccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 248 YGA-YLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 248 ~G~-~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.|+ .....++...+++..+++.+ ++||+..+ ++.+..|+.+++. +|||.|+| ++.
T Consensus 252 ~GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg~G----GI~s~~Da~e~i~-aGAs~Vqv-~Ta 308 (354)
T 3tjx_A 252 FGGLGGRYVLPTALANINAFYRRCPGKLIFGCG----GVYTGEDAFLHVL-AGASMVQV-GTA 308 (354)
T ss_dssp EEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEES----SCCSHHHHHHHHH-HTEEEEEE-CHH
T ss_pred ccccCchhhHHHHHHHHHHHHHhcCCCcEEEeC----CcCCHHHHHHHHH-cCCCEEEE-Chh
Confidence 121 23456777888888887765 68999987 8889999999884 89999999 653
No 385
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.37 E-value=0.37 Score=44.30 Aligned_cols=124 Identities=18% Similarity=0.190 Sum_probs=73.1
Q ss_pred cCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhh-ccCcEEEEeecccccccHHHH
Q psy7343 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA-VQVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 212 g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~-~~iPV~vKiR~~~d~~~~~e~ 290 (487)
-.+.++..+.++.+....|.|++. .|... . .| + ++++.+++. .++||.++.-+. + ....+
T Consensus 9 ~~~~~~~~~~~~~~~~~~diie~G--~p~~~-~---~g------~----~~i~~ir~~~~~~~i~~~~~~~-~--~~~~~ 69 (211)
T 3f4w_A 9 ELTLPEAMVFMDKVVDDVDIIEVG--TPFLI-R---EG------V----NAIKAIKEKYPHKEVLADAKIM-D--GGHFE 69 (211)
T ss_dssp SCCHHHHHHHHHHHGGGCSEEEEC--HHHHH-H---HT------T----HHHHHHHHHCTTSEEEEEEEEC-S--CHHHH
T ss_pred CCCHHHHHHHHHHhhcCccEEEeC--cHHHH-h---cc------H----HHHHHHHHhCCCCEEEEEEEec-c--chHHH
Confidence 346777777777665456777763 34321 1 11 2 455567766 478998865332 1 22345
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCH-HHHHHHHhhCCCcEEEc-CCCCCH-HHHHHHHHhcCCcEEEeccc
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASW-EHITAVRKALTIPVIAN-GNIQCL-ADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~-~~i~~i~~~~~iPVi~n-GgI~s~-~da~~~l~~~Gad~VmiGRa 364 (487)
++.+.++|+|+|++|+-.. ..+. +.++.+++ .+++++.. =...|+ +.++++. +.|+|.|.+..+
T Consensus 70 ~~~~~~~Gad~v~v~~~~~--------~~~~~~~~~~~~~-~g~~~~v~~~~~~t~~~~~~~~~-~~g~d~i~v~~g 136 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTD--------VLTIQSCIRAAKE-AGKQVVVDMICVDDLPARVRLLE-EAGADMLAVHTG 136 (211)
T ss_dssp HHHHHHTTCSEEEEETTSC--------HHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHH-HHTCCEEEEECC
T ss_pred HHHHHhcCCCEEEEeCCCC--------hhHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHH-HcCCCEEEEcCC
Confidence 8888999999999986521 1122 33344443 36766642 345565 4456665 789999877533
No 386
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=94.26 E-value=0.22 Score=51.83 Aligned_cols=121 Identities=18% Similarity=0.202 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHhh-CC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHH
Q psy7343 213 NDSKNLTEAAKLA-EP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 213 ~d~~~~~~aa~~~-~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e 289 (487)
.+++++++.++.+ ++ .|..+-+..|. .+++.-.+.++++++++ ++++.+-.--+|+..+..+
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~---------------~~~~~Di~~v~avRea~~~~~L~vDaN~~w~~~~Ai~ 254 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGV---------------FPPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSKW 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSS---------------SCHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCC---------------CCHHHHHHHHHHHHHhCCCCcEeeeCCCCCCHHHHHH
Confidence 4788887766644 44 46555554432 13344445666777766 4455554433566677788
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+++.+++. +..|- | + . .+++..+++++.+++||.+.-.+.+..++.++++...+|.+++
T Consensus 255 ~~~~L~~~-l~~iE-------e-P-~---~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~ 313 (445)
T 3va8_A 255 VAKELEGI-VEYLE-------D-P-A---GEIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILS 313 (445)
T ss_dssp HHHHTTTT-CSEEE-------S-C-B---SHHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEE
T ss_pred HHHHHhhh-cCeEe-------e-c-C---cCHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEe
Confidence 88888876 66552 1 1 1 3688899999999999999889999999999997677888775
No 387
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=94.24 E-value=0.15 Score=47.17 Aligned_cols=82 Identities=16% Similarity=0.163 Sum_probs=60.8
Q ss_pred cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcE-EEcCCCCCHHHHHH
Q psy7343 271 QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPV-IANGNIQCLADVEA 349 (487)
Q Consensus 271 ~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPV-i~nGgI~s~~da~~ 349 (487)
+.|++..++. .|.++..+.++.+.+.|++.|.+.-. .....+.++++++.+++++ ++.|++.+.+++..
T Consensus 6 ~~~i~~~i~~-~d~~~~~~~~~~~~~~G~~~i~l~~~---------~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~ 75 (212)
T 2v82_A 6 KLPLIAILRG-ITPDEALAHVGAVIDAGFDAVEIPLN---------SPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDA 75 (212)
T ss_dssp SSCEEEECTT-CCHHHHHHHHHHHHHHTCCEEEEETT---------STTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHH
T ss_pred CCCEEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEeCC---------ChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHH
Confidence 4567776643 36667888899999999999988222 1223567788877777664 46688999999988
Q ss_pred HHHhcCCcEEEecc
Q psy7343 350 CLAQTGVAGVMTAE 363 (487)
Q Consensus 350 ~l~~~Gad~VmiGR 363 (487)
++ +.|||+|.+|.
T Consensus 76 a~-~~Gad~V~~~~ 88 (212)
T 2v82_A 76 LA-RMGCQLIVTPN 88 (212)
T ss_dssp HH-HTTCCEEECSS
T ss_pred HH-HcCCCEEEeCC
Confidence 88 78999998764
No 388
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=94.23 E-value=0.27 Score=51.21 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=83.6
Q ss_pred CCHHHHHHHHHhh-CC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHH
Q psy7343 213 NDSKNLTEAAKLA-EP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 213 ~d~~~~~~aa~~~-~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e 289 (487)
.+++++.+.++.+ ++ .|..+-+..|. .+++.-.+.++++|+++ ++++.+-.--+|+..+..+
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~---------------~~~~~Di~~v~avRea~~d~~L~vDaN~~w~~~~Ai~ 256 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGV---------------FAPEEEMAAVEALRAAFPDHPLRLDPNAAWTPQTSVK 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSS---------------SCHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCC---------------CCHHHHHHHHHHHHHhCCCCcEEEECCCCCCHHHHHH
Confidence 5788887766644 44 46555554332 13344345666777766 4555554433566677788
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+++.+++. +..|-= + . .+++..+++++.+++||.+.-.+.+..++.++++...+|.+++
T Consensus 257 ~~~~L~~~-l~~iEe--------P-~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~ 315 (445)
T 3vdg_A 257 VAAGLEGV-LEYLED--------P-T---PGLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLS 315 (445)
T ss_dssp HHHHTTTT-CSEEEC--------C-S---SSHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEE
T ss_pred HHHHHhhH-HHeeeC--------C-C---CCHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEee
Confidence 88888877 665522 1 2 3788999999999999999989999999999997777888875
No 389
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=94.19 E-value=0.4 Score=43.93 Aligned_cols=130 Identities=18% Similarity=0.150 Sum_probs=73.7
Q ss_pred eeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeeccccc
Q psy7343 206 LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDV 284 (487)
Q Consensus 206 v~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~ 284 (487)
+++-+...+.++..+.++.+.+..+.|+++.+. . .. .| ++ +++.+++.. +.|+.+-.-+. |+
T Consensus 3 li~a~d~~~~~~~~~~~~~~~~~v~~iev~~~~--~-~~---~g------~~----~i~~l~~~~~~~~i~~~l~~~-di 65 (207)
T 3ajx_A 3 LQVAIDLLSTEAALELAGKVAEYVDIIELGTPL--I-KA---EG------LS----VITAVKKAHPDKIVFADMKTM-DA 65 (207)
T ss_dssp EEEEECCSCHHHHHHHHHHHGGGCSEEEECHHH--H-HH---HC------TH----HHHHHHHHSTTSEEEEEEEEC-SC
T ss_pred EEEEeCCCCHHHHHHHHHHhhccCCEEEECcHH--H-Hh---hC------HH----HHHHHHHhCCCCeEEEEEEec-Cc
Confidence 344455567788888887776666888885443 1 11 11 33 455566666 78888733222 32
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCH-HHHHHHHhhCCCcEEE-cCCCCCHHH-HHHHHHhcCCcEEEe
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASW-EHITAVRKALTIPVIA-NGNIQCLAD-VEACLAQTGVAGVMT 361 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~-~~i~~i~~~~~iPVi~-nGgI~s~~d-a~~~l~~~Gad~Vmi 361 (487)
...+++.+.++|+|+|++|.-... ... +.++.+++ .++++.. .-...|+++ +..+. +.|+|.|.+
T Consensus 66 --~~~~~~~a~~~Gad~v~vh~~~~~--------~~~~~~~~~~~~-~g~~~gv~~~s~~~p~~~~~~~~-~~g~d~v~~ 133 (207)
T 3ajx_A 66 --GELEADIAFKAGADLVTVLGSADD--------STIAGAVKAAQA-HNKGVVVDLIGIEDKATRAQEVR-ALGAKFVEM 133 (207)
T ss_dssp --HHHHHHHHHHTTCSEEEEETTSCH--------HHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHHHHH-HTTCSEEEE
T ss_pred --cHHHHHHHHhCCCCEEEEeccCCh--------HHHHHHHHHHHH-cCCceEEEEecCCChHHHHHHHH-HhCCCEEEE
Confidence 445678888999999999864210 112 22233332 2555522 223346666 44444 678999855
Q ss_pred ccc
Q psy7343 362 AEG 364 (487)
Q Consensus 362 GRa 364 (487)
..+
T Consensus 134 ~~~ 136 (207)
T 3ajx_A 134 HAG 136 (207)
T ss_dssp ECC
T ss_pred Eec
Confidence 433
No 390
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=94.19 E-value=0.3 Score=47.88 Aligned_cols=119 Identities=10% Similarity=0.015 Sum_probs=78.9
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARM 293 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~ 293 (487)
|.+.+.+.++.+.+. |+ ..+...|.+|....-..+.-.++++.+.+.++- |++.+- ..+..+..+.++.
T Consensus 18 D~~~l~~lv~~li~~--------Gv-~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~la~~ 86 (293)
T 1w3i_A 18 DKEKLKIHAENLIRK--------GI-DKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIRLAKL 86 (293)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHHHHHH
Confidence 667777777765555 44 445566667776545677778888888877654 666541 1144577888889
Q ss_pred HHHcCCcEEEEEccccCCCCCCCC-CC---CHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHH
Q psy7343 294 LERAGCQLLAVHGRTVDQRGMNTG-LA---SWEHITAVRKALTIPVIA-N-----GNIQCLADVEA 349 (487)
Q Consensus 294 le~~G~d~I~VhgRt~~~~g~~~g-~~---~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~ 349 (487)
+++.|+|++++..- .|.. +. .++.++.|.+.+++||+. | |--.+++.+.+
T Consensus 87 A~~~Gadavlv~~P------~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 87 SKDFDIVGIASYAP------YYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp GGGSCCSEEEEECC------CSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHhcCCCEEEEcCC------CCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 99999999999432 1322 22 246778888888999864 4 43356776665
No 391
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=94.18 E-value=0.26 Score=48.25 Aligned_cols=102 Identities=19% Similarity=0.229 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHhh--hccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh---
Q psy7343 256 WPLLTNLVSSLRQ--AVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA--- 330 (487)
Q Consensus 256 ~~~i~eiv~~v~~--~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~--- 330 (487)
.+.+..+++.+.+ ..++||.+.. |-....+.++...++|.+.||+.|-. +.-.-+.+..+++.+.
T Consensus 63 ~~~~~~~v~~~A~~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMiDgS~------~p~eeNi~~Tk~vv~~ah~ 132 (288)
T 3q94_A 63 FKTVVAMVKALIEEMNITVPVAIHL----DHGSSFEKCKEAIDAGFTSVMIDASH------HPFEENVETTKKVVEYAHA 132 (288)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEE----EEECSHHHHHHHHHHTCSEEEECCTT------SCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEC----CCCCCHHHHHHHHHcCCCeEEEeCCC------CCHHHHHHHHHHHHHHHHH
Confidence 4556677776766 6789999998 54445666777778999999994321 1111133444444332
Q ss_pred CCCcEEE----cCC-----------CCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 331 LTIPVIA----NGN-----------IQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 331 ~~iPVi~----nGg-----------I~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
.++.|-+ .|| .++++++.++.+++|+|...++=|-..
T Consensus 133 ~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~H 184 (288)
T 3q94_A 133 RNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVH 184 (288)
T ss_dssp TTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBS
T ss_pred cCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCccc
Confidence 3565543 122 488999999999999998887655443
No 392
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=94.17 E-value=0.55 Score=45.50 Aligned_cols=150 Identities=17% Similarity=0.217 Sum_probs=85.0
Q ss_pred CCCchHHHHHHHHhCCccceeccccchhhhcChh----HHHHHH------hcCCCCCCeeeeec-c--CCHHHHHHHHHh
Q psy7343 158 DASELPWRLLSRRYGSHLCYTPMVSAHQFIADKK----LRQEIL------MSTPEDRPLIIQFC-G--NDSKNLTEAAKL 224 (487)
Q Consensus 158 ~~td~~fr~i~~~~Ga~l~~t~~v~~~~Ll~~~~----~~~~~l------~~~~~~~Pv~Vqi~-g--~d~~~~~~aa~~ 224 (487)
.+-|.....+..+.|.+.+-+.--.+...+-.++ -..+++ .......||++-+- | .++++..+.+.+
T Consensus 35 tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~r 114 (275)
T 3vav_A 35 TCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAVK 114 (275)
T ss_dssp ECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHH
Confidence 3456677778888888765443111111111110 112222 22333467888864 3 477777766654
Q ss_pred hCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc--------------c---ccc
Q psy7343 225 AEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ--------------D---VNK 286 (487)
Q Consensus 225 ~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~--------------d---~~~ 286 (487)
+.+. +++|.|--| ....+.++++++. +|||...+.+.+ + .++
T Consensus 115 l~kaGa~aVklEdg-------------------~~~~~~i~~l~~~-GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~ 174 (275)
T 3vav_A 115 LMRAGAQMVKFEGG-------------------EWLAETVRFLVER-AVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQ 174 (275)
T ss_dssp HHHTTCSEEEEECC-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHC---CCCCSHHHHHH
T ss_pred HHHcCCCEEEECCc-------------------hhHHHHHHHHHHC-CCCEEEecCCCceEEeccCCeEEEcCCHHHHHH
Confidence 4444 444444322 1123444455543 889887654311 1 135
Q ss_pred HHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcC
Q psy7343 287 TVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANG 339 (487)
Q Consensus 287 ~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nG 339 (487)
..+-++.++++||+.|.+-+ .+. +.+++|.+.+++|+|+-|
T Consensus 175 ~i~rA~a~~eAGA~~ivlE~-----------vp~-~~a~~It~~l~iP~igIG 215 (275)
T 3vav_A 175 LLRDARAVEEAGAQLIVLEA-----------VPT-LVAAEVTRELSIPTIGIG 215 (275)
T ss_dssp HHHHHHHHHHHTCSEEEEES-----------CCH-HHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHHcCCCEEEecC-----------CCH-HHHHHHHHhCCCCEEEEc
Confidence 66778889999999998832 122 478899999999999765
No 393
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=94.16 E-value=0.38 Score=48.01 Aligned_cols=109 Identities=17% Similarity=0.276 Sum_probs=65.5
Q ss_pred HHHHHHHHHHhhhccCcEEEEeec---c-cccc----------cHHHHHHHH--HHcCCcEEEEEccccCCC---CCCCC
Q psy7343 257 PLLTNLVSSLRQAVQVPVSCKIRI---Y-QDVN----------KTVEYARML--ERAGCQLLAVHGRTVDQR---GMNTG 317 (487)
Q Consensus 257 ~~i~eiv~~v~~~~~iPV~vKiR~---~-~d~~----------~~~e~a~~l--e~~G~d~I~VhgRt~~~~---g~~~g 317 (487)
+.+.++.++.+ ..++|+.+-+=. + .+.. .....++.+ .+.|+|.+-+ .-+.... +.-.+
T Consensus 147 ~~l~rv~~ec~-~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kv-e~p~~~~~v~g~~~~ 224 (332)
T 3iv3_A 147 AYIERIGSECQ-AEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKV-EVPVNMVYVEGFAEG 224 (332)
T ss_dssp HHHHHHHHHHH-HHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEE-CCSSCGGGBTTTCSS
T ss_pred HHHHHHHHHHH-HcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEE-ecCCChhhhcccccc
Confidence 34455554443 348999884422 1 1211 155667777 5679999988 2221110 00011
Q ss_pred CC------CHHHHHHHHhhCCCcEE-EcCCCCCHHHHHHHHH---hcCC--cEEEeccccccC
Q psy7343 318 LA------SWEHITAVRKALTIPVI-ANGNIQCLADVEACLA---QTGV--AGVMTAEGNLYN 368 (487)
Q Consensus 318 ~~------~~~~i~~i~~~~~iPVi-~nGgI~s~~da~~~l~---~~Ga--d~VmiGRa~l~~ 368 (487)
.. ..+.++++.+...+|++ .+||+ +.+++.+.++ +.|| .||.+||....+
T Consensus 225 ~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-~~~~fl~~v~~A~~aGa~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 225 EVVYSKEEAAQAFREQEASTDLPYIYLSAGV-SAELFQETLVFAHKAGAKFNGVLCGRATWAG 286 (332)
T ss_dssp CCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-CHHHHHHHHHHHHHHTCCCCEEEECHHHHTT
T ss_pred cccccHHHHHHHHHHHHhcCCCCEEEECCCC-CHHHHHHHHHHHHHcCCCcceEEeeHHHHHh
Confidence 11 12457777788899966 68998 5667766653 3699 999999987666
No 394
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=94.08 E-value=0.5 Score=45.94 Aligned_cols=116 Identities=21% Similarity=0.216 Sum_probs=73.5
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCc-EEEEEccccCCCCCC-CCCCCHHHHHH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQ-LLAVHGRTVDQRGMN-TGLASWEHITA 326 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d-~I~VhgRt~~~~g~~-~g~~~~~~i~~ 326 (487)
|+....+.+++.++- .++.||++|--...+..+....++.+...|.. .+.+| |.....+.| ....++..+..
T Consensus 128 gs~~~~n~~ll~~~a-----~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~-Rg~~~yp~y~~~~vdl~~i~~ 201 (276)
T 1vs1_A 128 GARNMQNFPLLREVG-----RSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVE-RGIRTFEPSTRFTLDVAAVAV 201 (276)
T ss_dssp CGGGTTCHHHHHHHH-----HHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEE-CCBCCSCCSSSSBCBHHHHHH
T ss_pred CcccccCHHHHHHHH-----ccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEe-CCcCCCCCcCcchhCHHHHHH
Confidence 445566788777654 35899999975544556788888888899985 44555 322222112 23457888999
Q ss_pred HHhhCCCcEEEc----CCCCC--HHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 327 VRKALTIPVIAN----GNIQC--LADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 327 i~~~~~iPVi~n----GgI~s--~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+++..++||++. +|.++ ..-....+ ..||+|+||=+-+--+-.+
T Consensus 202 lk~~~~lpVi~dssH~~g~~~~~~~~~~aAv-a~Ga~Gl~IE~H~~~d~a~ 251 (276)
T 1vs1_A 202 LKEATHLPVIVDPSHPAGRRSLVPALAKAGL-AAGADGLIVEVHPNPEEAL 251 (276)
T ss_dssp HHHHBSSCEEECCHHHHCSGGGHHHHHHHHH-HTTCSEEEEEBCSSGGGCS
T ss_pred HHHHhCCCEEEeCCCCCCccchHHHHHHHHH-HcCCCEEEEEecCCcccCC
Confidence 999889999763 23222 22233334 5799999998865433333
No 395
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=93.98 E-value=0.58 Score=46.54 Aligned_cols=124 Identities=10% Similarity=0.075 Sum_probs=80.2
Q ss_pred CCHHHHHHHHH-hhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc--CcEEEEeecccccccHHH
Q psy7343 213 NDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ--VPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 213 ~d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~--iPV~vKiR~~~d~~~~~e 289 (487)
.+++++.+.++ .+++.+..+.+..|. .+++.-.+.++++++.++ +.+.+-.--+++..+..+
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~~~A~~ 179 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANR 179 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCCHHHHHH
Confidence 35565555444 444445555544331 134444566777887763 444443322456667788
Q ss_pred HHHHHHHc---CCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 290 YARMLERA---GCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 290 ~a~~le~~---G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+++.++++ ++..|- | + . ...+++..+++++.+++||.+.=.+.+..++.++++...+|.+.+
T Consensus 180 ~~~~l~~~~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~i 244 (332)
T 2ozt_A 180 WFAWLDRHGNGKIEYVE-------Q-P-L-PPDQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVI 244 (332)
T ss_dssp HHHHHHHHCCTTEEEEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHhhccCCcceeE-------C-C-C-CCCCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 88999988 555442 1 1 1 234789999999999999999889999999999996555676654
No 396
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=93.90 E-value=0.61 Score=46.26 Aligned_cols=139 Identities=14% Similarity=0.220 Sum_probs=87.1
Q ss_pred CCCCeeeeec-cCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEe-e
Q psy7343 202 EDRPLIIQFC-GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI-R 279 (487)
Q Consensus 202 ~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi-R 279 (487)
.+.||.+.+. |.+.+...++.+ ..|.-|- ..+. --.+..|-+...++++.... .++.|-+-+ +
T Consensus 74 ~~VPValHlDHg~~~e~i~~ai~---~GFtSVM----------iDgS-~~p~eENi~~Tk~vv~~ah~-~gvsVEaELG~ 138 (323)
T 2isw_A 74 PDIPICIHLDHGDTLESVKMAID---LGFSSVM----------IDAS-HHPFDENVRITKEVVAYAHA-RSVSVEAELGT 138 (323)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHH---TTCSEEE----------ECCT-TSCHHHHHHHHHHHHHHHHT-TTCEEEEEESC
T ss_pred CCCcEEEECCCCCCHHHHHHHHH---cCCCeEE----------ecCC-CCCHHHHHHHHHHHHHHHHH-cCCeEEEEeCC
Confidence 3579999998 666555443332 2233222 2211 11224456667777765543 366665532 2
Q ss_pred ccc--c-------cccHHHHHHHHHHcCCcEEEEEccccCCCCCCC--CC----CCHHHHHHHHhhCCCcEEEcCCCCCH
Q psy7343 280 IYQ--D-------VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT--GL----ASWEHITAVRKALTIPVIANGNIQCL 344 (487)
Q Consensus 280 ~~~--d-------~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~--g~----~~~~~i~~i~~~~~iPVi~nGgI~s~ 344 (487)
+++ | ..+.++..+..+++|+|.+.+.=.|.-+. |. |. -+++.+++|++.+++|++.-|+=.-+
T Consensus 139 vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~--Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp 216 (323)
T 2isw_A 139 LGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGA--YKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVP 216 (323)
T ss_dssp C----------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSS--BCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCC
T ss_pred ccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCccccc--cCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCC
Confidence 222 1 14678888899999999998832332222 44 43 45799999999999999999988888
Q ss_pred HHHHHHHHhcCCc
Q psy7343 345 ADVEACLAQTGVA 357 (487)
Q Consensus 345 ~da~~~l~~~Gad 357 (487)
++..+.+.++|-+
T Consensus 217 ~~~~~~~~~~gg~ 229 (323)
T 2isw_A 217 KDVKDMINKYGGK 229 (323)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHhccc
Confidence 8888888777643
No 397
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.85 E-value=0.21 Score=49.10 Aligned_cols=109 Identities=12% Similarity=0.171 Sum_probs=67.0
Q ss_pred CChHHHHHHHHHHhhhccCcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccccCCC-CCCCCCC--CH-HHHHHHH
Q psy7343 254 DDWPLLTNLVSSLRQAVQVPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRTVDQR-GMNTGLA--SW-EHITAVR 328 (487)
Q Consensus 254 ~d~~~i~eiv~~v~~~~~iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt~~~~-g~~~g~~--~~-~~i~~i~ 328 (487)
-..+.+...++.|.+.+++||++-+..|. +..+..+.++.++++|+++|.|-+.....+ |...|.. .. +.+.+|+
T Consensus 66 vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~ 145 (298)
T 3eoo_A 66 STMDDVLVDANRITNATNLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIK 145 (298)
T ss_dssp CCHHHHHHHHHHHHHHCCSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHH
Confidence 35677777788888888999999887663 444667778889999999999976543222 2222221 22 4455554
Q ss_pred h---hC-CCcEEEcCCCCCH--HHHHHHH------HhcCCcEEEec
Q psy7343 329 K---AL-TIPVIANGNIQCL--ADVEACL------AQTGVAGVMTA 362 (487)
Q Consensus 329 ~---~~-~iPVi~nGgI~s~--~da~~~l------~~~Gad~VmiG 362 (487)
. .- +.+++.++...+. +.+.+.+ .+.|||+|.+=
T Consensus 146 Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~ 191 (298)
T 3eoo_A 146 AAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPE 191 (298)
T ss_dssp HHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeC
Confidence 3 22 3444444444433 2222222 25799999873
No 398
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=93.84 E-value=0.17 Score=49.47 Aligned_cols=95 Identities=20% Similarity=0.155 Sum_probs=63.8
Q ss_pred ccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEcccc---CCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHH
Q psy7343 270 VQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV---DQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLAD 346 (487)
Q Consensus 270 ~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~---~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~d 346 (487)
+.-|+++.+ ...++++.+++.|+++|.+-.... ...++.....+.+.++++++.+++|++.+.++.+.++
T Consensus 20 ~~~~~i~~~-------~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~ 92 (297)
T 2zbt_A 20 FKGGVIMDV-------TTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVE 92 (297)
T ss_dssp GTTEEEEEE-------SSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHH
T ss_pred hhCCeeeee-------chHHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHH
Confidence 455777766 347899999999999997711000 0001111234578899999999999999888888888
Q ss_pred HHHHHHhcCCcEEEeccccccCccccc
Q psy7343 347 VEACLAQTGVAGVMTAEGNLYNPALFT 373 (487)
Q Consensus 347 a~~~l~~~Gad~VmiGRa~l~~P~lf~ 373 (487)
++.++ +.|||+| .+......|.+.+
T Consensus 93 ~~~~~-~aGad~v-~~~~~~~~~~~~~ 117 (297)
T 2zbt_A 93 AMILE-AIGVDFI-DESEVLTPADEEH 117 (297)
T ss_dssp HHHHH-HTTCSEE-EEETTSCCSCSSC
T ss_pred HHHHH-HCCCCEE-eeeCCCChHHHHH
Confidence 88777 7999999 4433222344433
No 399
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=93.74 E-value=0.11 Score=54.72 Aligned_cols=70 Identities=23% Similarity=0.288 Sum_probs=55.8
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
.+..+.++.+.++|+|.|.++.... + ....++.++++++.. ++||++ |++.|.++++.+. +.|||+|.+|
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g-----~-~~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~-~aGaD~I~vg 298 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHG-----H-SKGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALA-EAGADAVKVG 298 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCC-----S-BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHH-HTTCSEEEEC
T ss_pred cchHHHHHHHhhcccceEEecccCC-----c-chhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHH-HcCCCEEEEC
Confidence 4667788888899999999953321 1 122358899999988 889888 8899999999988 7999999986
No 400
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=93.69 E-value=0.38 Score=49.97 Aligned_cols=121 Identities=14% Similarity=0.200 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHhh-CC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHH
Q psy7343 213 NDSKNLTEAAKLA-EP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVE 289 (487)
Q Consensus 213 ~d~~~~~~aa~~~-~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e 289 (487)
.+++++++.++.+ ++ .+..+-+..|. .+++.-.+.++++|+++ ++.+.+-.--+|+..+..+
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~---------------~~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai~ 251 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGV---------------FPPEQEAEAIQALRDAFPGLPLRLDPNAAWTVETSIR 251 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSS---------------SCHHHHHHHHHHHHHHSTTCCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCC---------------CCHHHHHHHHHHHHHhCCCCcEeccCCCCCCHHHHHH
Confidence 5788887766654 44 45555554332 13343345566777766 4455554433566667778
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+++.+++. +..|- | + . .+++..+++++.+++||.+.-.+.+..++.++++...+|.+++
T Consensus 252 ~~~~L~~~-l~~iE-------e-P-~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~ 310 (441)
T 3vc5_A 252 VGRALDGV-LEYLE-------D-P-T---PGIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLI 310 (441)
T ss_dssp HHHHTTTT-CSEEE-------C-C-S---SSHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEE
T ss_pred HHHHHHHH-HHHhh-------c-c-C---CCHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEee
Confidence 88888776 65542 2 1 1 3788999999999999999888999999999997777888765
No 401
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=93.69 E-value=1 Score=44.24 Aligned_cols=139 Identities=14% Similarity=0.232 Sum_probs=88.5
Q ss_pred CCCCeeeeec-cCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEe-e
Q psy7343 202 EDRPLIIQFC-GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI-R 279 (487)
Q Consensus 202 ~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi-R 279 (487)
.+.||.+.+. |.+.+...++. +..|.-|= ..+. --.+..|-+...++++.... .++.|-+-+ +
T Consensus 71 ~~VPValHlDHg~~~e~~~~ai---~~GFtSVM----------iDgS-~~p~eENi~~Tk~vv~~ah~-~gvsVEaELG~ 135 (305)
T 1rvg_A 71 ARVPVAVHLDHGSSYESVLRAL---RAGFTSVM----------IDKS-HEDFETNVRETRRVVEAAHA-VGVTVEAELGR 135 (305)
T ss_dssp CSSCEEEEEEEECSHHHHHHHH---HTTCSEEE----------ECCT-TSCHHHHHHHHHHHHHHHHH-TTCEEEEEESC
T ss_pred CCCcEEEECCCCCCHHHHHHHH---HcCCCeee----------eCCC-CCCHHHHHHHHHHHHHHHHH-cCCEEEEEEee
Confidence 4689999998 66655444433 22233222 2211 11224456667777765543 366665543 2
Q ss_pred ccc--c----------cccHHHHHHHHHHcCCcEEEEEccccCCCCCCC--C--CCCHHHHHHHHhhCCCcEEEcCCCCC
Q psy7343 280 IYQ--D----------VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT--G--LASWEHITAVRKALTIPVIANGNIQC 343 (487)
Q Consensus 280 ~~~--d----------~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~--g--~~~~~~i~~i~~~~~iPVi~nGgI~s 343 (487)
+++ | ..+..+..+..+++|+|.+.+.=.|.-.. |. | .-+++.+++|++.+++|++.-|+=.=
T Consensus 136 vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~--Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv 213 (305)
T 1rvg_A 136 LAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGA--YKGKGRPFIDHARLERIARLVPAPLVLHGASAV 213 (305)
T ss_dssp CCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSS--BCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCC
T ss_pred ccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccc--cCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCC
Confidence 222 1 14678888889999999998832332222 44 3 34789999999999999999998877
Q ss_pred HHHHHHHHHhcCCc
Q psy7343 344 LADVEACLAQTGVA 357 (487)
Q Consensus 344 ~~da~~~l~~~Gad 357 (487)
+++..+++.+.|-+
T Consensus 214 ~~~~~~~~~~~gg~ 227 (305)
T 1rvg_A 214 PPELVERFRASGGE 227 (305)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred cHHHHHHHHhhccc
Confidence 88888888777754
No 402
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.66 E-value=0.18 Score=53.33 Aligned_cols=70 Identities=21% Similarity=0.334 Sum_probs=55.2
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
.+..+.++.+.++|+|.|.|+.... . ....++.++++++.. ++||++ |++.+.++++.+. +.|||+|.+|
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g-----~-~~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~-~aGaD~I~Vg 300 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHG-----H-SEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALI-EAGVSAVKVG 300 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCT-----T-SHHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHH-HHTCSEEEEC
T ss_pred cchHHHHHHHHhccCceEEeccccc-----c-chHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHH-HhCCCEEEEC
Confidence 3557778888889999999954321 1 112358899999988 899988 8899999999988 7899999986
No 403
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=93.57 E-value=1.4 Score=42.79 Aligned_cols=139 Identities=12% Similarity=0.174 Sum_probs=91.5
Q ss_pred CCC-eeeeeccCCHHHHHHHHHhhCC-cCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEee
Q psy7343 203 DRP-LIIQFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIR 279 (487)
Q Consensus 203 ~~P-v~Vqi~g~d~~~~~~aa~~~~~-~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR 279 (487)
+.| +.|.+.+.+.++..+.++.+.. .+|.||+-... .. . ..+.+.+.+.+..+++.+ ++|+++.+|
T Consensus 38 g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~-l~----~------~~~~~~v~~~l~~lr~~~~~~PiI~T~R 106 (276)
T 3o1n_A 38 GAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDH-FA----N------VTTAESVLEAAGAIREIITDKPLLFTFR 106 (276)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGG-CT----T------TTCHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred CCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEecc-cc----c------cCcHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 344 4567888898888887777764 48999987655 11 0 123477888888898887 899999999
Q ss_pred ccc-------ccccHHHHHHHHHHcC-CcEEEEEccccCCCCCCCCCCCHHHHHHHHh---hCCCcEEEc----CCCCCH
Q psy7343 280 IYQ-------DVNKTVEYARMLERAG-CQLLAVHGRTVDQRGMNTGLASWEHITAVRK---ALTIPVIAN----GNIQCL 344 (487)
Q Consensus 280 ~~~-------d~~~~~e~a~~le~~G-~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~---~~~iPVi~n----GgI~s~ 344 (487)
..+ +.+...++.+.+.+.| +|+|.|--.. .-+.++++.+ .-+..||++ .+--+.
T Consensus 107 t~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~-----------~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~ 175 (276)
T 3o1n_A 107 SAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFT-----------GDDEVKATVGYAHQHNVAVIMSNHDFHKTPAA 175 (276)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG-----------CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCH
T ss_pred EhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC-----------CHHHHHHHHHHHHhCCCEEEEEeecCCCCcCH
Confidence 722 2335666777777889 9999993211 1244555543 457888875 333445
Q ss_pred HHHHHHHH---hcCCcEEEecc
Q psy7343 345 ADVEACLA---QTGVAGVMTAE 363 (487)
Q Consensus 345 ~da~~~l~---~~Gad~VmiGR 363 (487)
+++.+.++ ..|||.|=++.
T Consensus 176 ~el~~~~~~~~~~GaDIvKia~ 197 (276)
T 3o1n_A 176 EEIVQRLRKMQELGADIPKIAV 197 (276)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEe
Confidence 56655543 46999776654
No 404
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=93.56 E-value=0.59 Score=43.29 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=85.5
Q ss_pred CCeeeeeccC----CHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEe
Q psy7343 204 RPLIIQFCGN----DSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKI 278 (487)
Q Consensus 204 ~Pv~Vqi~g~----d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKi 278 (487)
.-|++|..+. +.+...++++.++++ +++|.++ .++ .++.+++.+++|+....
T Consensus 7 ~~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~-------------------~~~----~i~~i~~~~~~pv~~~~ 63 (223)
T 1y0e_A 7 LIVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN-------------------TKE----DILAIKETVDLPVIGIV 63 (223)
T ss_dssp EEEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE-------------------SHH----HHHHHHHHCCSCEEEEC
T ss_pred eEEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC-------------------CHH----HHHHHHHhcCCCEEeee
Confidence 3478898865 677888888888776 4444331 233 35557777899995432
Q ss_pred eccc-----ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHH
Q psy7343 279 RIYQ-----DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLA 352 (487)
Q Consensus 279 R~~~-----d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~ 352 (487)
+... -+....+.++.+.++|+|.|.+|...... ......+.++++++.+ +.+++. ++.|.+++.++.
T Consensus 64 ~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~----p~~~~~~~i~~~~~~~~~~~v~~--~~~t~~e~~~~~- 136 (223)
T 1y0e_A 64 KRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQR----PKETLDELVSYIRTHAPNVEIMA--DIATVEEAKNAA- 136 (223)
T ss_dssp BCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCC----SSSCHHHHHHHHHHHCTTSEEEE--ECSSHHHHHHHH-
T ss_pred ccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccC----cccCHHHHHHHHHHhCCCceEEe--cCCCHHHHHHHH-
Confidence 2210 11234556677788999999997542111 0012357788888876 666665 678999988876
Q ss_pred hcCCcEEEeccc
Q psy7343 353 QTGVAGVMTAEG 364 (487)
Q Consensus 353 ~~Gad~VmiGRa 364 (487)
+.|+|.++++-.
T Consensus 137 ~~G~d~i~~~~~ 148 (223)
T 1y0e_A 137 RLGFDYIGTTLH 148 (223)
T ss_dssp HTTCSEEECTTT
T ss_pred HcCCCEEEeCCC
Confidence 789999987643
No 405
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.54 E-value=1.4 Score=42.96 Aligned_cols=138 Identities=20% Similarity=0.313 Sum_probs=90.7
Q ss_pred CCCeeeeec--c----CCHHHHHHHHH---hhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccC
Q psy7343 203 DRPLIIQFC--G----NDSKNLTEAAK---LAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQV 272 (487)
Q Consensus 203 ~~Pv~Vqi~--g----~d~~~~~~aa~---~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~i 272 (487)
+.||-+=|+ + .+.+++..+.+ .+.+. +|+|-+ || .+..+ .-|.+...++++... +.
T Consensus 89 ~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVf--G~---L~~dg------~iD~~~~~~Li~~a~---~l 154 (287)
T 3iwp_A 89 QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVF--GA---LTEDG------HIDKELCMSLMAICR---PL 154 (287)
T ss_dssp CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEE--CC---BCTTS------CBCHHHHHHHHHHHT---TS
T ss_pred CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEE--ee---eCCCC------CcCHHHHHHHHHHcC---CC
Confidence 578877776 2 35555554433 33344 666654 44 11111 147888888887643 57
Q ss_pred cEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH
Q psy7343 273 PVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 273 PV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~ 350 (487)
+++.. |..+...+..+..+.+.+.|++.|.-+|-.. +.....+.++++.+.. +|+|++.|||+ .+.+.++
T Consensus 155 ~vTFH-RAFD~~~d~~~Ale~Li~lGvdrILTSG~~~------~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~~l 226 (287)
T 3iwp_A 155 PVTFH-RAFDMVHDPMAALETLLTLGFERVLTSGCDS------SALEGLPLIKRLIEQAKGRIVVMPGGGIT-DRNLQRI 226 (287)
T ss_dssp CEEEC-GGGGGCSCHHHHHHHHHHHTCSEEEECTTSS------STTTTHHHHHHHHHHHTTSSEEEECTTCC-TTTHHHH
T ss_pred cEEEE-CchhccCCHHHHHHHHHHcCCCEEECCCCCC------ChHHhHHHHHHHHHHhCCCCEEEECCCcC-HHHHHHH
Confidence 88876 4433445688888999999999999866411 1123467777776654 59999999986 5778888
Q ss_pred HHhcCCcEEEec
Q psy7343 351 LAQTGVAGVMTA 362 (487)
Q Consensus 351 l~~~Gad~VmiG 362 (487)
++.+|++.+-..
T Consensus 227 ~~~tG~~~~H~S 238 (287)
T 3iwp_A 227 LEGSGATEFHCS 238 (287)
T ss_dssp HHHHCCSEEEEC
T ss_pred HHhhCCCEEeEC
Confidence 877999888764
No 406
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.54 E-value=0.36 Score=48.50 Aligned_cols=117 Identities=16% Similarity=0.236 Sum_probs=75.9
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCC-CCCCCHHHHHHH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMN-TGLASWEHITAV 327 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~-~g~~~~~~i~~i 327 (487)
|+....+.+++.++- .++.||.+|--...+.++...+++.+...|..-+++--|.....+.| ....++..+..+
T Consensus 196 gAr~~~n~~LL~~va-----~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~l 270 (350)
T 1vr6_A 196 GARNAQNFRLLSKAG-----SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPII 270 (350)
T ss_dssp CGGGTTCHHHHHHHH-----TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHH
T ss_pred CcccccCHHHHHHHH-----ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHH
Confidence 445566788777643 36899999975544566888888888899986666622433222223 344578888899
Q ss_pred HhhCCCcEEEc----CCCCC--HHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 328 RKALTIPVIAN----GNIQC--LADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 328 ~~~~~iPVi~n----GgI~s--~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++..++||++. +|-+. ..-....+ ..||||+||=+-+--+-.+
T Consensus 271 k~~~~lpVi~dssHs~G~~~~v~~~a~AAv-A~GA~Gl~IE~H~~pd~al 319 (350)
T 1vr6_A 271 RKESHLPILVDPSHSGGRRDLVIPLSRAAI-AVGAHGIIVEVHPEPEKAL 319 (350)
T ss_dssp HHHBSSCEEECHHHHHCSGGGHHHHHHHHH-HHTCSEEEEEBCSCGGGCS
T ss_pred HHhhCCCEEEeCCCCCcccchHHHHHHHHH-HhCCCEEEEEecCCcccCC
Confidence 99889999772 23222 22233334 5799999998765444333
No 407
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=93.52 E-value=0.4 Score=46.83 Aligned_cols=102 Identities=16% Similarity=0.163 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh---CC
Q psy7343 256 WPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA---LT 332 (487)
Q Consensus 256 ~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~---~~ 332 (487)
.+.+..+++.+.+..++||.+.. |-....+.++...++|.+.||+.|-. +.-.-+.+..+++.+. .+
T Consensus 59 ~~~~~~~v~~~a~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMiDgS~------lp~eeNi~~Tk~vv~~ah~~g 128 (286)
T 1gvf_A 59 LEEIYALCSAYSTTYNMPLALHL----DHHESLDDIRRKVHAGVRSAMIDGSH------FPFAENVKLVKSVVDFCHSQD 128 (286)
T ss_dssp HHHHHHHHHHHHHHTTSCBEEEE----EEECCHHHHHHHHHTTCCEEEECCTT------SCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCcEEEEc----CCCCCHHHHHHHHHcCCCeEEECCCC------CCHHHHHHHHHHHHHHHHHcC
Confidence 56677777777777899999998 44444666777778999999994321 1111133444444332 24
Q ss_pred CcEEE--------c---------CCCCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 333 IPVIA--------N---------GNIQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 333 iPVi~--------n---------GgI~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
+.|-+ . .-.++++++.++.+++|+|...++=|-..
T Consensus 129 vsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~H 180 (286)
T 1gvf_A 129 CSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAH 180 (286)
T ss_dssp CEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCS
T ss_pred CEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCccc
Confidence 44321 1 12388999999999999998887755443
No 408
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=93.52 E-value=0.52 Score=47.71 Aligned_cols=131 Identities=11% Similarity=0.108 Sum_probs=82.6
Q ss_pred CCCeeeeeccCCHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc---cCcEEEEe
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV---QVPVSCKI 278 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~---~iPV~vKi 278 (487)
..|+...+...++++..+.++. .++.|..+-+..|. .+.+.-.+.++++++++ ++.+.+-.
T Consensus 139 ~v~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~---------------~~~~~di~~v~~vr~a~~g~~~~l~vDa 203 (376)
T 4h2h_A 139 SVSSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGA---------------RPIEIDIEAIRKVWEAVRGTGIALAADG 203 (376)
T ss_dssp EEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCS---------------SCHHHHHHHHHHHHHHHTTSCCEEEEEC
T ss_pred ceeEeeecccCCHHHHHHHHHHHHhcCceEEEEecCC---------------CCHHHHHHHHHHHHhhccCCeeEEEEee
Confidence 3456666666778777665544 44446666555443 12222234455566544 34454433
Q ss_pred ecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcE
Q psy7343 279 RIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAG 358 (487)
Q Consensus 279 R~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~ 358 (487)
.-+|+..+..++++.+++.+. .+ +| + . .+++.++++++..++||.+.-.+.+..|+.++++...+|.
T Consensus 204 N~~~~~~~A~~~~~~l~~~~~---~i-----Ee-P-~---~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~ 270 (376)
T 4h2h_A 204 NRGWTTRDALRFSRECPDIPF---VM-----EQ-P-C---NSFEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDG 270 (376)
T ss_dssp TTCCCHHHHHHHHHHCTTSCE---EE-----ES-C-S---SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSE
T ss_pred ccCCCHHHHHHHHHHHhhccc---cc-----cC-C-c---chhhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCc
Confidence 334566677777777766542 33 22 1 1 3578889999999999999889999999999996666787
Q ss_pred EEe
Q psy7343 359 VMT 361 (487)
Q Consensus 359 Vmi 361 (487)
+++
T Consensus 271 v~~ 273 (376)
T 4h2h_A 271 FGM 273 (376)
T ss_dssp ECC
T ss_pred ccc
Confidence 754
No 409
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=93.52 E-value=0.76 Score=44.55 Aligned_cols=127 Identities=17% Similarity=0.127 Sum_probs=74.0
Q ss_pred HHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc-CcEEEEeecc--cccccHHHHHHHHHH
Q psy7343 221 AAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VPVSCKIRIY--QDVNKTVEYARMLER 296 (487)
Q Consensus 221 aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iPV~vKiR~~--~d~~~~~e~a~~le~ 296 (487)
.|++++++ +|.| +-... ...+..|. -..+.-..+.+...+++|++.++ .||++-+..+ .+.++..+-+..+.+
T Consensus 41 sA~l~e~aG~d~i-lvGdS-l~~~~lG~-~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~~a~rl~k 117 (275)
T 3vav_A 41 FAALLDRANVDVQ-LIGDS-LGNVLQGQ-TTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFASAVKLMR 117 (275)
T ss_dssp HHHHHHHTTCSEE-EECTT-HHHHTTCC-SSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEE-EECcH-HHHHHcCC-CCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 45566666 6766 32212 22233332 22223346666666777877774 8899988764 233455555667777
Q ss_pred cCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEc-----------CCC----CCHHHHHHHH------HhcC
Q psy7343 297 AGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIAN-----------GNI----QCLADVEACL------AQTG 355 (487)
Q Consensus 297 ~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~n-----------GgI----~s~~da~~~l------~~~G 355 (487)
+|+++|.+-+. ....+.++.+.+ .+|||++. ||. +|.+.+.+++ ++.|
T Consensus 118 aGa~aVklEdg----------~~~~~~i~~l~~-~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAG 186 (275)
T 3vav_A 118 AGAQMVKFEGG----------EWLAETVRFLVE-RAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAG 186 (275)
T ss_dssp TTCSEEEEECC----------GGGHHHHHHHHH-TTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEECCc----------hhHHHHHHHHHH-CCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcC
Confidence 89999999432 123466777765 48899863 332 3444444443 3578
Q ss_pred CcEEEe
Q psy7343 356 VAGVMT 361 (487)
Q Consensus 356 ad~Vmi 361 (487)
||++.+
T Consensus 187 A~~ivl 192 (275)
T 3vav_A 187 AQLIVL 192 (275)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 888764
No 410
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=93.50 E-value=0.7 Score=45.53 Aligned_cols=102 Identities=17% Similarity=0.154 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHhhh-ccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh---C
Q psy7343 256 WPLLTNLVSSLRQA-VQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA---L 331 (487)
Q Consensus 256 ~~~i~eiv~~v~~~-~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~---~ 331 (487)
.+.+..+++.+.+. .++||.+.. |-....+.++...++|.+.||+.|-. +.-.-+.+..+++.+. .
T Consensus 58 ~~~~~~~v~~aa~~~~~VPValHL----DHg~~~e~~~~ai~~GFtSVMiDgS~------~p~eeNi~~Tk~vv~~ah~~ 127 (307)
T 3n9r_A 58 IDMAVGMVKIMCERYPHIPVALHL----DHGTTFESCEKAVKAGFTSVMIDASH------HAFEENLELTSKVVKMAHNA 127 (307)
T ss_dssp HHHHHHHHHHHHHHSTTSCEEEEE----EEECSHHHHHHHHHHTCSEEEECCTT------SCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEC----CCCCCHHHHHHHHHhCCCcEEEECCC------CCHHHHHHHHHHHHHHHHHc
Confidence 45566667666655 689999998 44344566667778999999994321 1111133444444332 3
Q ss_pred CCcEEE----cCC-------------CCCHHHHHHHHHhcCCcEEEecccccc
Q psy7343 332 TIPVIA----NGN-------------IQCLADVEACLAQTGVAGVMTAEGNLY 367 (487)
Q Consensus 332 ~iPVi~----nGg-------------I~s~~da~~~l~~~Gad~VmiGRa~l~ 367 (487)
++.|-+ .|| .++++++.++.+++|+|...++=|-..
T Consensus 128 gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~H 180 (307)
T 3n9r_A 128 GVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSH 180 (307)
T ss_dssp TCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCS
T ss_pred CCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcc
Confidence 555543 122 378999999999999998887655443
No 411
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=93.50 E-value=0.53 Score=45.89 Aligned_cols=109 Identities=14% Similarity=0.115 Sum_probs=72.7
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCC-CCCHHHHHHH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG-LASWEHITAV 327 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g-~~~~~~i~~i 327 (487)
|+....+.+++.++ . .++.||.+|--..-+.++....++.+.+.|.+-|++.=|+.. . .|.. ..|+..+..+
T Consensus 117 gA~~~~n~~LLr~v----a-~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~-y-~~~~~~vdl~~i~~l 189 (285)
T 3sz8_A 117 PAFLARQTDLVVAI----A-KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSS-F-GYDNLVVDMLGFRQM 189 (285)
T ss_dssp CGGGTTCHHHHHHH----H-HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEE-C-SSSCEECCTTHHHHH
T ss_pred CccccCCHHHHHHH----H-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCC-C-CCCcCccCHHHHHHH
Confidence 44455677766653 2 368999999755446678889999999999987877445432 1 1322 2578889999
Q ss_pred HhhC-CCcEEEcCCCC-----------CH------HHHHHHHHhcCCcEEEecccc
Q psy7343 328 RKAL-TIPVIANGNIQ-----------CL------ADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 328 ~~~~-~iPVi~nGgI~-----------s~------~da~~~l~~~Gad~VmiGRa~ 365 (487)
++.. +.||++..+-. .. .-+.... ..||||++|=+-+
T Consensus 190 k~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAv-A~GA~gl~IE~H~ 244 (285)
T 3sz8_A 190 AETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGI-AVGIAGLFLEAHP 244 (285)
T ss_dssp HHHTTSCCEEEETTTTCC---------------HHHHHHHHH-HHCCSEEEEEEES
T ss_pred HHhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHH-HhCCCEEEEEecc
Confidence 9988 59999843332 12 2233444 5799999987643
No 412
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=93.50 E-value=0.67 Score=45.48 Aligned_cols=89 Identities=21% Similarity=0.228 Sum_probs=57.2
Q ss_pred hccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCC---CCCHHHHHHHHhhCCCcEEEcCCCCCHH
Q psy7343 269 AVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG---LASWEHITAVRKALTIPVIANGNIQCLA 345 (487)
Q Consensus 269 ~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g---~~~~~~i~~i~~~~~iPVi~nGgI~s~~ 345 (487)
...-+++... +..+.++.+++.|+++|++..+.........| ..+.+.++++++.+++||+++-.+...+
T Consensus 19 ~~~~g~i~~~-------~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~~~ 91 (305)
T 2nv1_A 19 MQKGGVIMDV-------INAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIV 91 (305)
T ss_dssp TTTTCEEEEE-------SSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTCHH
T ss_pred HccCCeeecC-------CHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccchH
Confidence 3344566654 56789999999999999653210000000112 2367899999999999999643333366
Q ss_pred HHHHHHHhcCCcEEEeccccc
Q psy7343 346 DVEACLAQTGVAGVMTAEGNL 366 (487)
Q Consensus 346 da~~~l~~~Gad~VmiGRa~l 366 (487)
++..++ ..|||+|. +...+
T Consensus 92 ~~~~~~-a~GAd~V~-~~~~l 110 (305)
T 2nv1_A 92 EARVLE-AMGVDYID-ESEVL 110 (305)
T ss_dssp HHHHHH-HHTCSEEE-ECTTS
T ss_pred HHHHHH-HCCCCEEE-EeccC
Confidence 666666 69999996 55555
No 413
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=93.36 E-value=0.67 Score=43.49 Aligned_cols=71 Identities=11% Similarity=0.108 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHH-HHHHHHHhcCCcEEEecccc
Q psy7343 287 TVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLA-DVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 287 ~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~-da~~~l~~~Gad~VmiGRa~ 365 (487)
...+++..++.|+|++.+.+. .-+.++.+++.++-.++..+||+-.. +..+.+ ..|+|.+.|||++
T Consensus 124 ~~~~a~~a~~~g~~GvV~sat------------~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~-~~Gad~iVVGR~I 190 (222)
T 4dbe_A 124 ADYIKNVIREISPKGIVVGGT------------KLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAV-CAGADYEIIGRSI 190 (222)
T ss_dssp HHHHHHHHHHHCCSEEEECTT------------CHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHH-HHTCSEEEECHHH
T ss_pred HHHHHHHHHHhCCCEEEECCC------------CHHHHHHHHHhCCCCEEEcCCcccCccCHHHHH-HcCCCEEEECHHh
Confidence 377889999999999988321 12456777777644677788887431 455666 5899999999999
Q ss_pred ccCcc
Q psy7343 366 LYNPA 370 (487)
Q Consensus 366 l~~P~ 370 (487)
..-++
T Consensus 191 ~~A~d 195 (222)
T 4dbe_A 191 YNAGN 195 (222)
T ss_dssp HTSSS
T ss_pred cCCCC
Confidence 87543
No 414
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.33 E-value=0.2 Score=45.99 Aligned_cols=82 Identities=12% Similarity=0.138 Sum_probs=60.7
Q ss_pred CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC-CcEEEcCCCCCHHHHHHH
Q psy7343 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT-IPVIANGNIQCLADVEAC 350 (487)
Q Consensus 272 iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~-iPVi~nGgI~s~~da~~~ 350 (487)
.|++.-+|.. +.++..++++.+.+.|++.|.+|-++. ...+.++++++.++ -.+++.|-+.+.+++..+
T Consensus 10 ~~~i~~~~~~-~~~~~~~~~~~~~~~G~~~iev~~~~~---------~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a 79 (205)
T 1wa3_A 10 HKIVAVLRAN-SVEEAKEKALAVFEGGVHLIEITFTVP---------DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKA 79 (205)
T ss_dssp HCEEEEECCS-SHHHHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHH
T ss_pred CCEEEEEecC-CHHHHHHHHHHHHHCCCCEEEEeCCCh---------hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHH
Confidence 5677777644 566788999999999999999986632 11356778887652 224556778999999888
Q ss_pred HHhcCCcEEEecccc
Q psy7343 351 LAQTGVAGVMTAEGN 365 (487)
Q Consensus 351 l~~~Gad~VmiGRa~ 365 (487)
. +.|+|.+ ++-++
T Consensus 80 ~-~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 80 V-ESGAEFI-VSPHL 92 (205)
T ss_dssp H-HHTCSEE-ECSSC
T ss_pred H-HcCCCEE-EcCCC
Confidence 8 6899999 76553
No 415
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.31 E-value=0.13 Score=54.60 Aligned_cols=71 Identities=18% Similarity=0.365 Sum_probs=55.7
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
.+..+.++.+.++|+|.|.+|.-. | +. ...++.++++++.+ ++||++ |+|.+.++++++. +.|+|+|.+|.
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~----G-~~-~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~-~aGad~I~vg~ 325 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQ----G-NS-VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLI-DAGVDGLRVGM 325 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSC----C-CS-HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHH-HHTCSEEEECS
T ss_pred hhhHHHHHHHHHcCCCEEEeeccC----C-cc-hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHH-HcCCCEEEECC
Confidence 346777788889999999996431 0 11 12368899999998 899987 7899999999988 78999999854
No 416
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=93.30 E-value=0.96 Score=44.85 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHhhh-ccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh---C
Q psy7343 256 WPLLTNLVSSLRQA-VQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA---L 331 (487)
Q Consensus 256 ~~~i~eiv~~v~~~-~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~---~ 331 (487)
.+.+..+++...+. .++||.+.. |-....+.++...+.|.+.||+.|-. +.-.-|.+..+++.+. .
T Consensus 59 ~~~~~~~v~~aa~~~~~VPValHl----DHg~~~e~i~~ai~~GFtSVMiDgS~------~p~eENi~~Tk~vv~~ah~~ 128 (323)
T 2isw_A 59 MIYLKKLCEAALEKHPDIPICIHL----DHGDTLESVKMAIDLGFSSVMIDASH------HPFDENVRITKEVVAYAHAR 128 (323)
T ss_dssp THHHHHHHHHHHHHCTTSCEEEEE----EEECSHHHHHHHHHTTCSEEEECCTT------SCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEC----CCCCCHHHHHHHHHcCCCeEEecCCC------CCHHHHHHHHHHHHHHHHHc
Confidence 45556666666666 689999998 54445666777888999999994321 1111133444444332 2
Q ss_pred CCcEEE----cC----------CCCCHHHHHHHHHhcCCcEEEeccccccC
Q psy7343 332 TIPVIA----NG----------NIQCLADVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 332 ~iPVi~----nG----------gI~s~~da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
++.|-+ .| -.++++++.++.+++|+|...++=|-...
T Consensus 129 gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG 179 (323)
T 2isw_A 129 SVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHG 179 (323)
T ss_dssp TCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEECSSCCSS
T ss_pred CCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCcccc
Confidence 444421 11 24889999999999999988877654443
No 417
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=93.27 E-value=0.6 Score=43.66 Aligned_cols=130 Identities=17% Similarity=0.166 Sum_probs=84.3
Q ss_pred CCCCCeeeeeccCC----HH--HHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCc
Q psy7343 201 PEDRPLIIQFCGND----SK--NLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVP 273 (487)
Q Consensus 201 ~~~~Pv~Vqi~g~d----~~--~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iP 273 (487)
....++++|....+ ++ ...+.++.++++ +++|.++ .++ .++.+++.+++|
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~-------------------~~~----~i~~i~~~~~~p 71 (234)
T 1yxy_A 15 KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN-------------------SVR----DIKEIQAITDLP 71 (234)
T ss_dssp TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE-------------------SHH----HHHHHHTTCCSC
T ss_pred hCCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC-------------------CHH----HHHHHHHhCCCC
Confidence 34566777765433 56 677777777665 4555443 133 355677778999
Q ss_pred EEEEeeccc-c----cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHH
Q psy7343 274 VSCKIRIYQ-D----VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADV 347 (487)
Q Consensus 274 V~vKiR~~~-d----~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da 347 (487)
+..-++-.. + +....+.++.+.++|+|.|.+|...... ..+....+.++++++.. +.+|+. ++.+.+++
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~---~~~~~~~~~i~~i~~~~~~~~v~~--~~~t~~ea 146 (234)
T 1yxy_A 72 IIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDR---HDGLDIASFIRQVKEKYPNQLLMA--DISTFDEG 146 (234)
T ss_dssp EEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCC---TTCCCHHHHHHHHHHHCTTCEEEE--ECSSHHHH
T ss_pred EEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCC---CCCccHHHHHHHHHHhCCCCeEEE--eCCCHHHH
Confidence 953222211 1 2345677888899999999997653211 01112357888888876 666665 78899999
Q ss_pred HHHHHhcCCcEE
Q psy7343 348 EACLAQTGVAGV 359 (487)
Q Consensus 348 ~~~l~~~Gad~V 359 (487)
..+. +.|+|.|
T Consensus 147 ~~a~-~~Gad~i 157 (234)
T 1yxy_A 147 LVAH-QAGIDFV 157 (234)
T ss_dssp HHHH-HTTCSEE
T ss_pred HHHH-HcCCCEE
Confidence 8887 7899998
No 418
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.23 E-value=0.35 Score=47.49 Aligned_cols=108 Identities=11% Similarity=0.122 Sum_probs=67.1
Q ss_pred cCChHHHHHHHHHHhhhccCcEEEEeeccc--ccccHHHHHHHHHHcCCcEEEEEccccC-CCCCCCCCC---CHHHHHH
Q psy7343 253 QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ--DVNKTVEYARMLERAGCQLLAVHGRTVD-QRGMNTGLA---SWEHITA 326 (487)
Q Consensus 253 ~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~--d~~~~~e~a~~le~~G~d~I~VhgRt~~-~~g~~~g~~---~~~~i~~ 326 (487)
.-..+.+...++.|.+.+++||++-+..|. +..+..+.++.++++|+++|.|-+.... ..+...|.. .-+.+.+
T Consensus 60 ~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~ 139 (295)
T 1xg4_A 60 ISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDR 139 (295)
T ss_dssp CSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHH
Confidence 345777778888888888999999887653 4556788888899999999999665422 112222221 1244444
Q ss_pred H---HhhC-CCcEEEcCCCCCH-----H----HHHHHHHhcCCcEEEe
Q psy7343 327 V---RKAL-TIPVIANGNIQCL-----A----DVEACLAQTGVAGVMT 361 (487)
Q Consensus 327 i---~~~~-~iPVi~nGgI~s~-----~----da~~~l~~~Gad~Vmi 361 (487)
| ++.- +.++..+|..... + +++. +++.|||++.+
T Consensus 140 I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~a-y~eAGAd~i~~ 186 (295)
T 1xg4_A 140 IRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQA-YVEAGAEMLFP 186 (295)
T ss_dssp HHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHH-HHHTTCSEEEE
T ss_pred HHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHH-HHHcCCCEEEE
Confidence 4 3332 3444444444332 2 2222 33689999987
No 419
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=93.14 E-value=0.86 Score=42.90 Aligned_cols=104 Identities=19% Similarity=0.188 Sum_probs=62.0
Q ss_pred HHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHH----HHHhhC-CC
Q psy7343 259 LTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHIT----AVRKAL-TI 333 (487)
Q Consensus 259 i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~----~i~~~~-~i 333 (487)
+.+.++...+ .++-+++-+ . +..+. +.+...+.+.|-+-.|...+.|.--..+..+.+. .+++.. ++
T Consensus 106 ~~~k~~~A~~-~GL~~ivcV----g--e~~e~-~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~ 177 (225)
T 1hg3_A 106 LEAAIRRAEE-VGLMTMVCS----N--NPAVS-AAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEV 177 (225)
T ss_dssp HHHHHHHHHH-HTCEEEEEE----S--SHHHH-HHHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHH-CCCEEEEEe----C--CHHHH-HHHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCC
Confidence 4554444433 355555543 1 33333 3445667777777556443322000022233222 233333 68
Q ss_pred cEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 334 PVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 334 PVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+|++.|+|++.+++..+. ..|+||+.||.+++.-+++
T Consensus 178 ~ilyggsV~~~n~~~~~~-~~~vDG~LVG~a~l~a~~~ 214 (225)
T 1hg3_A 178 KVLCGAGISTGEDVKKAI-ELGTVGVLLASGVTKAKDP 214 (225)
T ss_dssp EEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHTCSSH
T ss_pred EEEEeCCCCcHHHHHHHH-hCCCCEEEeCHHHHCCcCH
Confidence 999999999999998887 7899999999999976654
No 420
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.12 E-value=0.34 Score=51.29 Aligned_cols=71 Identities=18% Similarity=0.323 Sum_probs=54.2
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa 364 (487)
+..+.++.+.++|+|.|.|..-. + . ....++.++++++.. ++||++ |+|.+.++++.+. +.|+|+|.+|-+
T Consensus 256 d~~era~aLveaGvd~I~Id~a~----g-~-~~~v~~~i~~i~~~~~~~~vi~-g~v~t~e~a~~~~-~aGad~i~vg~g 327 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAH----G-H-SQGVIDKVKEVRAKYPSLNIIA-GNVATAEATKALI-EAGANVVKVGIG 327 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSC----T-T-SHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHH-HHTCSEEEECSS
T ss_pred chHHHHHHHHhhccceEEecccc----c-c-hhhhhhHHHHHHHhCCCceEEe-eeeccHHHHHHHH-HhCCCEEEECCC
Confidence 56777888899999999994321 0 0 112357899999887 578886 7899999999988 789999998643
No 421
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=93.10 E-value=0.35 Score=49.34 Aligned_cols=111 Identities=17% Similarity=0.222 Sum_probs=71.0
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCC-CCCCCCHHHHHHH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM-NTGLASWEHITAV 327 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~-~~g~~~~~~i~~i 327 (487)
|+....+.+++.. +. .++.||++|--...+.++...+++.+.+.|..-|++-=|+....+. .....|+..+..+
T Consensus 232 gs~~~~n~~LL~~----~a-~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~l 306 (385)
T 3nvt_A 232 GARNMQNFELLKA----AG-RVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPIL 306 (385)
T ss_dssp CGGGTTCHHHHHH----HH-TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHH
T ss_pred CcccccCHHHHHH----HH-ccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHH
Confidence 3334456666554 32 4689999998665567788888999999998666553342222211 1233578889999
Q ss_pred HhhCCCcEEEc----CCCCCH--HHHHHHHHhcCCcEEEecccc
Q psy7343 328 RKALTIPVIAN----GNIQCL--ADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 328 ~~~~~iPVi~n----GgI~s~--~da~~~l~~~Gad~VmiGRa~ 365 (487)
++..++||+.. +|-+.. .-+.... ..||||++|=+-+
T Consensus 307 k~~~~lpV~~D~th~~G~r~~v~~~a~AAv-A~GA~gl~iE~H~ 349 (385)
T 3nvt_A 307 KKETHLPVMVDVTHSTGRKDLLLPCAKAAL-AIEADGVMAEVHP 349 (385)
T ss_dssp HHHBSSCEEEEHHHHHCCGGGHHHHHHHHH-HTTCSEEEEEBCS
T ss_pred HHhcCCCEEEcCCCCCCccchHHHHHHHHH-HhCCCEEEEEecC
Confidence 99889999653 222222 1233444 5899999998743
No 422
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=93.04 E-value=1.8 Score=40.58 Aligned_cols=132 Identities=10% Similarity=0.030 Sum_probs=70.5
Q ss_pred eeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecc-ccc
Q psy7343 206 LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIY-QDV 284 (487)
Q Consensus 206 v~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~-~d~ 284 (487)
+=+|+. ..++.....++.+.+. |+ ..++.|...| .+.+...++.+++. +.-|++=.... .+.
T Consensus 69 lD~Kl~-DipnTv~~~~~~~~~~--------ga-d~vtvh~~~G------~~~l~~~~~~~~~~-g~~v~vLt~~s~~~~ 131 (228)
T 3m47_A 69 ADFKVA-DIPETNEKICRATFKA--------GA-DAIIVHGFPG------ADSVRACLNVAEEM-GREVFLLTEMSHPGA 131 (228)
T ss_dssp EEEEEC-SCHHHHHHHHHHHHHT--------TC-SEEEEESTTC------HHHHHHHHHHHHHH-TCEEEEECCCCSGGG
T ss_pred EEEeec-ccHhHHHHHHHHHHhC--------CC-CEEEEeccCC------HHHHHHHHHHHHhc-CCCeEEEEeCCCccH
Confidence 335554 3455544455544444 33 4455665433 34455555555432 33355422221 111
Q ss_pred -----ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC--CcEEEcCCCCCH-HHHHHHHHhcCC
Q psy7343 285 -----NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT--IPVIANGNIQCL-ADVEACLAQTGV 356 (487)
Q Consensus 285 -----~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~--iPVi~nGgI~s~-~da~~~l~~~Ga 356 (487)
.....++++..+.|++++.+ +.+ ..+.++++++..+ .++ ..+||... .+. +.+ +.|+
T Consensus 132 ~~~~~~~~~~~a~~a~~~G~~GvV~-~at-----------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~-~aGa 196 (228)
T 3m47_A 132 EMFIQGAADEIARMGVDLGVKNYVG-PST-----------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GET-LRFA 196 (228)
T ss_dssp GTTHHHHHHHHHHHHHHTTCCEEEC-CSS-----------CHHHHHHHHHHHCSSSEE-EECC----------CG-GGTC
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEE-CCC-----------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHH-HcCC
Confidence 12356778888999999887 322 1245677777664 455 66777632 245 666 6899
Q ss_pred cEEEeccccccCc
Q psy7343 357 AGVMTAEGNLYNP 369 (487)
Q Consensus 357 d~VmiGRa~l~~P 369 (487)
|.+.+||+++..+
T Consensus 197 d~iVvGr~I~~a~ 209 (228)
T 3m47_A 197 DAIIVGRSIYLAD 209 (228)
T ss_dssp SEEEECHHHHTSS
T ss_pred CEEEECHHHhCCC
Confidence 9999999987543
No 423
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=93.03 E-value=0.61 Score=45.71 Aligned_cols=115 Identities=17% Similarity=0.210 Sum_probs=73.9
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCC-CCCHHHHHHH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG-LASWEHITAV 327 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g-~~~~~~i~~i 327 (487)
|+....+.+++.++ . .++.||.+|--...+.++...+++.+...|..-+++.=|+..- .|.. ..++..+..+
T Consensus 115 gA~~~~n~~Ll~~~----a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~--~y~~~~~dl~~i~~l 187 (292)
T 1o60_A 115 PAFLARQTDLVEAM----A-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNF--GYDNLIVDMLGFSVM 187 (292)
T ss_dssp CGGGTTCHHHHHHH----H-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC--STTCEECCTTHHHHH
T ss_pred CcccccCHHHHHHH----H-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC--CCCccccCHHHHHHH
Confidence 45555677766553 3 4689999997655577889999999999998666654554321 1221 1477888889
Q ss_pred HhhC-CCcEEEc-----------CCCCCH-----HHH-HHHHHhcCCcEEEeccccccCccc
Q psy7343 328 RKAL-TIPVIAN-----------GNIQCL-----ADV-EACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 328 ~~~~-~iPVi~n-----------GgI~s~-----~da-~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
++.. +.||++. |+-... ..+ .... ..||+|+||=+-+--+-.+
T Consensus 188 k~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAv-a~Ga~Gl~IE~H~~~d~al 248 (292)
T 1o60_A 188 KKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGL-AVGIAGLFLEAHPNPNQAK 248 (292)
T ss_dssp HHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHH-HHCCSEEEEEEESSGGGCS
T ss_pred HhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHH-HcCCCEEEEEecCCcccCC
Confidence 9887 8999982 122122 223 3334 5799999998765444333
No 424
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=92.91 E-value=0.44 Score=46.43 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=69.3
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCC-CCCHHHHHHH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG-LASWEHITAV 327 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g-~~~~~~i~~i 327 (487)
|+....+.+++.++ . .++.||.+|--...+.++....++.+...|...+++.=|+..- .|.. ..+...+..+
T Consensus 112 ga~~~~n~~ll~~~----a-~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~--~~~~~~~dl~~i~~l 184 (280)
T 2qkf_A 112 PAFLARQTDLVVAM----A-KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSF--GYDNLVVDMLGFGVM 184 (280)
T ss_dssp CGGGTTBHHHHHHH----H-HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC--STTCEECCTTHHHHH
T ss_pred CcccccCHHHHHHH----H-cCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC--CCCccccCHHHHHHH
Confidence 44445667765553 2 4699999997655577889999999999998666554454321 1211 1467788889
Q ss_pred HhhC-CCcEEEc-----------CCCCCH------HHHHHHHHhcCCcEEEeccccc
Q psy7343 328 RKAL-TIPVIAN-----------GNIQCL------ADVEACLAQTGVAGVMTAEGNL 366 (487)
Q Consensus 328 ~~~~-~iPVi~n-----------GgI~s~------~da~~~l~~~Gad~VmiGRa~l 366 (487)
++.. +.||++. |+-... .-+.... ..|+||+||=+-+-
T Consensus 185 k~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aav-a~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 185 KQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGM-ATRLAGLFLESHPD 240 (280)
T ss_dssp HHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHH-TTCCSEEEEEC---
T ss_pred HHhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHH-HcCCCEEEEeecCC
Confidence 9887 8999983 222222 1223334 68999999877543
No 425
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=92.90 E-value=0.79 Score=46.68 Aligned_cols=130 Identities=10% Similarity=0.126 Sum_probs=83.7
Q ss_pred CCeeeeeccC-CHHHHHHHHHh-hCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeec
Q psy7343 204 RPLIIQFCGN-DSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRI 280 (487)
Q Consensus 204 ~Pv~Vqi~g~-d~~~~~~aa~~-~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~ 280 (487)
.|+...+... +++++.+.++. +++.+..+-+..|- ..|.+.+. ++++.+ ++.+.+-.--
T Consensus 138 v~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~~--------------~~d~~~v~----avR~~~~~~~l~vDaN~ 199 (388)
T 3qld_A 138 VEVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIAP--------------GRDRAAIK----AVRLRYPDLAIAADANG 199 (388)
T ss_dssp EEBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECBT--------------TBSHHHHH----HHHHHCTTSEEEEECTT
T ss_pred EEEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeCc--------------HHHHHHHH----HHHHHCCCCeEEEECCC
Confidence 4555555533 48888776654 44556666555431 13444444 455554 3334443222
Q ss_pred ccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 281 YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 281 ~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
+|+..+... ++.+++.++..|- | + . ...+++..+++++.+++||.+.=.+.+..|+.++++...+|.|+
T Consensus 200 ~~~~~~A~~-~~~l~~~~i~~iE-------e-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~ 268 (388)
T 3qld_A 200 SYRPEDAPV-LRQLDAYDLQFIE-------Q-P-L-PEDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLN 268 (388)
T ss_dssp CCCGGGHHH-HHHGGGGCCSCEE-------C-C-S-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred CCChHHHHH-HHHHhhCCCcEEE-------C-C-C-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEE
Confidence 456666665 6788888776552 1 1 1 23468889999999999999988999999999999766788887
Q ss_pred ec
Q psy7343 361 TA 362 (487)
Q Consensus 361 iG 362 (487)
+=
T Consensus 269 ~k 270 (388)
T 3qld_A 269 VK 270 (388)
T ss_dssp EC
T ss_pred EC
Confidence 53
No 426
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.90 E-value=0.44 Score=44.87 Aligned_cols=80 Identities=19% Similarity=0.186 Sum_probs=60.5
Q ss_pred cEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHH
Q psy7343 273 PVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLA 352 (487)
Q Consensus 273 PV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~ 352 (487)
|++.=+|.. +.++..+.++.+.+.|++.|.+.-+ .....+.++++++.+.--+++.|-+.+.+++..++
T Consensus 18 ~ii~vir~~-~~~~~~~~~~al~~gGv~~iel~~k---------~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~- 86 (224)
T 1vhc_A 18 KIVPVIALD-NADDILPLADTLAKNGLSVAEITFR---------SEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAK- 86 (224)
T ss_dssp CEEEEECCS-SGGGHHHHHHHHHHTTCCEEEEETT---------STTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHH-
T ss_pred CeEEEEeCC-CHHHHHHHHHHHHHcCCCEEEEecc---------CchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHH-
Confidence 555555543 6778899999999999999999322 22335788888888743456667788999999999
Q ss_pred hcCCcEEEecc
Q psy7343 353 QTGVAGVMTAE 363 (487)
Q Consensus 353 ~~Gad~VmiGR 363 (487)
+.|||+|..+.
T Consensus 87 ~aGAd~v~~p~ 97 (224)
T 1vhc_A 87 SSGADFVVTPG 97 (224)
T ss_dssp HHTCSEEECSS
T ss_pred HCCCCEEEECC
Confidence 78999999883
No 427
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=92.88 E-value=1.8 Score=40.66 Aligned_cols=104 Identities=21% Similarity=0.212 Sum_probs=62.1
Q ss_pred HHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHH----HHHhhC-CC
Q psy7343 259 LTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHIT----AVRKAL-TI 333 (487)
Q Consensus 259 i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~----~i~~~~-~i 333 (487)
+.+.++...+ .++-+++-+ . +..+. +.+...+.+.|-+-.|...+.|.--..+..+.+. .+++.. ++
T Consensus 103 ~~~k~~~A~~-~GL~~ivcV----g--e~~e~-~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~ 174 (226)
T 1w0m_A 103 LARLVAKAKS-LGLDVVVCA----P--DPRTS-LAAAALGPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEV 174 (226)
T ss_dssp HHHHHHHHHH-TTCEEEEEE----S--SHHHH-HHHHHTCCSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHH-CCCEEEEEe----C--CHHHH-HHHhcCCCCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhccCCC
Confidence 4555544433 355555544 1 33333 3455667777777555433321000022233222 233333 68
Q ss_pred cEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 334 PVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 334 PVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+|++.|+|++.+++..+. ..|+||+.||.+++.-+++
T Consensus 175 ~ilyggsV~~~n~~~~~~-~~giDG~LVG~a~l~a~~~ 211 (226)
T 1w0m_A 175 SVITGAGIESGDDVAAAL-RLGTRGVLLASAAVKAKDP 211 (226)
T ss_dssp EEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHTCSSH
T ss_pred EEEEeCCCCcHHHHHHHH-hCCCCEEEECHHHHCCcCH
Confidence 999999999999998887 7899999999999976654
No 428
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=92.84 E-value=0.17 Score=49.94 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=58.7
Q ss_pred CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEc-CCCCCHHHHH
Q psy7343 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIAN-GNIQCLADVE 348 (487)
Q Consensus 272 iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~n-GgI~s~~da~ 348 (487)
.|+. ++++ |.+...+.++.+.+.|+++|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+. |+..+ +++.
T Consensus 23 TPf~-dg~i--D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st-~~ai 97 (306)
T 1o5k_A 23 TPFK-NGEL--DLESYERLVRYQLENGVNALIVLGTTGESP-TVNEDEREKLVSRTLEIVDGKIPVIVGAGTNST-EKTL 97 (306)
T ss_dssp CCEE-TTEE--CHHHHHHHHHHHHHTTCCEEEESSGGGTGG-GCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCH-HHHH
T ss_pred cCcC-CCCc--CHHHHHHHHHHHHHcCCCEEEeCccccchh-hCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccH-HHHH
Confidence 4665 5432 556778888889999999999966654432 121111124455555544 6899854 55444 4444
Q ss_pred HH---HHhcCCcEEEeccccccCc
Q psy7343 349 AC---LAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 349 ~~---l~~~Gad~VmiGRa~l~~P 369 (487)
++ .++.|||++++-...+..|
T Consensus 98 ~la~~A~~~Gadavlv~~P~y~~~ 121 (306)
T 1o5k_A 98 KLVKQAEKLGANGVLVVTPYYNKP 121 (306)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCC
Confidence 33 3357999999998877666
No 429
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=92.77 E-value=0.17 Score=49.59 Aligned_cols=93 Identities=18% Similarity=0.152 Sum_probs=58.0
Q ss_pred CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEc-CCCCCHHHHH
Q psy7343 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIAN-GNIQCLADVE 348 (487)
Q Consensus 272 iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~n-GgI~s~~da~ 348 (487)
.|+. ++++ |.+...+.++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+. |+..+ +++.
T Consensus 11 TPf~-dg~i--D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t-~~ai 85 (294)
T 2ehh_A 11 TPFK-EGEV--DYEALGNLIEFHVDNGTDAILVCGTTGESP-TLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNAT-HEAV 85 (294)
T ss_dssp CCEE-TTEE--CHHHHHHHHHHHHTTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCH-HHHH
T ss_pred cCcC-CCCc--CHHHHHHHHHHHHHCCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCH-HHHH
Confidence 4555 5422 555778888889999999999966554432 121111224455555544 6899864 55444 4444
Q ss_pred HH---HHhcCCcEEEeccccccCc
Q psy7343 349 AC---LAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 349 ~~---l~~~Gad~VmiGRa~l~~P 369 (487)
++ .++.|||++++....+..|
T Consensus 86 ~la~~A~~~Gadavlv~~P~y~~~ 109 (294)
T 2ehh_A 86 HLTAHAKEVGADGALVVVPYYNKP 109 (294)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCC
Confidence 33 3457999999998877655
No 430
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=92.77 E-value=0.18 Score=49.31 Aligned_cols=93 Identities=17% Similarity=0.179 Sum_probs=57.9
Q ss_pred CcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEE-cCCCCCHHHHH
Q psy7343 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIA-NGNIQCLADVE 348 (487)
Q Consensus 272 iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~-nGgI~s~~da~ 348 (487)
.|+. ++++ |.+...+.++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+ .|+..+.+ +.
T Consensus 11 TPf~-dg~i--D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~-ai 85 (289)
T 2yxg_A 11 TPFK-NKEV--DFDGLEENINFLIENGVSGIVAVGTTGESP-TLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEE-AI 85 (289)
T ss_dssp CCEE-TTEE--CHHHHHHHHHHHHHTTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHH-HH
T ss_pred cCcC-CCCc--CHHHHHHHHHHHHHCCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHH-HH
Confidence 4555 5432 556778888889999999999966554432 121111124455555544 699985 45544444 43
Q ss_pred HH---HHhcCCcEEEeccccccCc
Q psy7343 349 AC---LAQTGVAGVMTAEGNLYNP 369 (487)
Q Consensus 349 ~~---l~~~Gad~VmiGRa~l~~P 369 (487)
++ .++.|||++++....+..|
T Consensus 86 ~la~~a~~~Gadavlv~~P~y~~~ 109 (289)
T 2yxg_A 86 ELSVFAEDVGADAVLSITPYYNKP 109 (289)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCC
T ss_pred HHHHHHHhcCCCEEEECCCCCCCC
Confidence 33 3457999999998877655
No 431
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=92.75 E-value=0.13 Score=51.31 Aligned_cols=130 Identities=18% Similarity=0.260 Sum_probs=71.0
Q ss_pred CeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeeccc
Q psy7343 205 PLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQ 282 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~ 282 (487)
|+...+...++++..+.++ ++.+..+.+..|.+ |..+..| .+.++++++.+ ++.+.+-.--+|
T Consensus 71 ~~~~ti~~~~~e~~~~~~~--~~G~~~~KiKvg~~---------g~~~~~d----~~~v~avR~~~G~~~~L~vDaN~~w 135 (327)
T 2opj_A 71 PVNATVPAVGPEEAARIVA--SSGCTTAKVKVAER---------GQSEAND----VARVEAVRDALGPRGRVRIDVNGAW 135 (327)
T ss_dssp EBCEEECSCCHHHHHHHHH--HHCCSEEEEECCC---------------CH----HHHHHHHHHHHCTTSEEEEECTTCS
T ss_pred EEeEEeCCCCHHHHHHHHH--HCCCCEEEEEeCCC---------CCCHHHH----HHHHHHHHHHhCCCCEEEEECCCCC
Confidence 4444444457776554443 33466665554431 1112222 34566677665 344444332346
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
+..+..++++.+++.++..|- | + . .+++..+++++.+++||.+.=.+.+..|+.++++...+|.+++
T Consensus 136 ~~~~A~~~~~~L~~~~l~~iE-------q-P-~---~~~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~i 202 (327)
T 2opj_A 136 DVDTAVRMIRLLDRFELEYVE-------Q-P-C---ATVDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVL 202 (327)
T ss_dssp CHHHHHHHHHHHGGGCEEEEE-------C-C-S---SSHHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEE
T ss_pred CHHHHHHHHHHHHhcCCcEEe-------C-C-C---CCHHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 667778888899887766442 2 1 1 2578889999999999999889999999999886666888876
No 432
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=92.68 E-value=0.86 Score=43.89 Aligned_cols=127 Identities=16% Similarity=0.176 Sum_probs=71.6
Q ss_pred HHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcE-EEEeeccc--ccccHHHHHHHHHH
Q psy7343 221 AAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPV-SCKIRIYQ--DVNKTVEYARMLER 296 (487)
Q Consensus 221 aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV-~vKiR~~~--d~~~~~e~a~~le~ 296 (487)
.|++++++ +|.|=+ |-....+..|. -..+.-..+......++|++.++.|+ ++-+-.+. +.++..+-+..+.+
T Consensus 29 sA~l~e~aG~d~ilv--Gdsl~~~~lG~-~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~k 105 (264)
T 1m3u_A 29 FAKLFADEGLNVMLV--GDSLGMTVQGH-DSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMR 105 (264)
T ss_dssp HHHHHHHHTCCEEEE--CTTHHHHTTCC-SSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEE--CHHHHHHHcCC-CCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHHHHH
Confidence 45566665 666644 33122333332 22233456777777788888887654 54443321 23334444557778
Q ss_pred cCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEE-----------cCCC----CCHHHHHHHH------HhcC
Q psy7343 297 AGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIA-----------NGNI----QCLADVEACL------AQTG 355 (487)
Q Consensus 297 ~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~-----------nGgI----~s~~da~~~l------~~~G 355 (487)
+|+++|.+-|. ....+.|+.+.+ .+|||++ .||. ++.+.+.+++ ++.|
T Consensus 106 aGa~aVklEgg----------~e~~~~I~al~~-agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAG 174 (264)
T 1m3u_A 106 AGANMVKIEGG----------EWLVETVQMLTE-RAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAG 174 (264)
T ss_dssp TTCSEEECCCS----------GGGHHHHHHHHH-TTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEECCc----------HHHHHHHHHHHH-CCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCC
Confidence 99999998332 122355666654 3799983 3554 3544444433 3579
Q ss_pred CcEEEe
Q psy7343 356 VAGVMT 361 (487)
Q Consensus 356 ad~Vmi 361 (487)
|+++.+
T Consensus 175 A~~ivl 180 (264)
T 1m3u_A 175 AQLLVL 180 (264)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 998876
No 433
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=92.62 E-value=1.2 Score=43.81 Aligned_cols=106 Identities=17% Similarity=0.113 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhh---CC
Q psy7343 256 WPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKA---LT 332 (487)
Q Consensus 256 ~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~---~~ 332 (487)
.+.+..+++.+.+ .++||.+.. |-....+.++...+.|.+.||+.|-. +.-.-+.+..+++.+. .+
T Consensus 58 ~~~~~~~v~~~a~-~~VPValHl----DHg~~~e~~~~ai~~GFtSVMiDgS~------~p~eENi~~Tk~vv~~ah~~g 126 (305)
T 1rvg_A 58 RALTLMAVELAKE-ARVPVAVHL----DHGSSYESVLRALRAGFTSVMIDKSH------EDFETNVRETRRVVEAAHAVG 126 (305)
T ss_dssp HHHHHHHHHHHHH-CSSCEEEEE----EEECSHHHHHHHHHTTCSEEEECCTT------SCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh-CCCcEEEEC----CCCCCHHHHHHHHHcCCCeeeeCCCC------CCHHHHHHHHHHHHHHHHHcC
Confidence 3455666776666 789999988 44444566677778999999994321 1111133444444332 24
Q ss_pred CcEEE----cC-------------CCCCHHHHHHHHHhcCCcEEEeccccccCcccc
Q psy7343 333 IPVIA----NG-------------NIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372 (487)
Q Consensus 333 iPVi~----nG-------------gI~s~~da~~~l~~~Gad~VmiGRa~l~~P~lf 372 (487)
+.|-+ .| -.++++++.++.+++|+|...++=|-....+-|
T Consensus 127 vsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~ 183 (305)
T 1rvg_A 127 VTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKG 183 (305)
T ss_dssp CEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCS
T ss_pred CEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccccCC
Confidence 44322 01 138899999999999999988776655444433
No 434
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=92.54 E-value=1.4 Score=42.24 Aligned_cols=100 Identities=16% Similarity=0.270 Sum_probs=59.8
Q ss_pred HHHHHHHHhhh---ccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCC----------------
Q psy7343 259 LTNLVSSLRQA---VQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLA---------------- 319 (487)
Q Consensus 259 i~eiv~~v~~~---~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~---------------- 319 (487)
+.+..+.+++. .-+|.+..+ .++.++..++++.+++.|+|.|.+ |--... +...|+.
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~g--~p~~~~~~~~~~~l~~~G~D~IEl-G~P~sd-P~adgp~i~~a~~~al~~G~~~~ 79 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLMVG--YPDYETSLKAFKEVLKNGTDILEI-GFPFSD-PVADGPTIQVAHEVALKNGIRFE 79 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEETT--SSCHHHHHHHHHHHHHTTCSEEEE-ECCCSC-CTTSCHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHhcCCceEEEEecCC--CCChHHHHHHHHHHHHcCCCEEEE-CCCCCC-cccccHHHHHHHHHHHHcCCCHH
Confidence 34444444432 224455443 234457899999999999999999 431111 1111111
Q ss_pred -CHHHHHHHHhhC-CCcEEEcCCCCC-----HHHHHHHHHhcCCcEEEec
Q psy7343 320 -SWEHITAVRKAL-TIPVIANGNIQC-----LADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 320 -~~~~i~~i~~~~-~iPVi~nGgI~s-----~~da~~~l~~~Gad~VmiG 362 (487)
.++.++++++.+ ++|++..|..+. .+...+...+.|+|++.+.
T Consensus 80 ~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 80 DVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECT
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEEC
Confidence 236688889888 999999643321 1333333447899999984
No 435
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=92.50 E-value=0.83 Score=43.18 Aligned_cols=135 Identities=11% Similarity=0.106 Sum_probs=75.7
Q ss_pred CCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cC--c--EEEE
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QV--P--VSCK 277 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~i--P--V~vK 277 (487)
.++=+|+. ..++.....++.+.++ |+ ..++.|...| .+.+.++++.+++.. +. | +.+.
T Consensus 57 v~lD~kl~-Dip~t~~~~~~~~~~~--------Ga-d~vtvH~~~g------~~~l~~~~~~~~~~~~~g~~~~~~~~V~ 120 (239)
T 1dbt_A 57 LFLDLKLH-DIPTTVNKAMKRLASL--------GV-DLVNVHAAGG------KKMMQAALEGLEEGTPAGKKRPSLIAVT 120 (239)
T ss_dssp EEEEEEEC-SCHHHHHHHHHHHHTT--------TC-SEEEEEGGGC------HHHHHHHHHHHHHHSCTTSCCCEEEEEC
T ss_pred EEEEeccc-cchHHHHHHHHHHHhc--------CC-CEEEEeCcCC------HHHHHHHHHHHHhhhccCCCCccEEEEE
Confidence 44556775 5666655566655555 43 4455565433 233455566665431 33 4 4444
Q ss_pred eeccc---cc-----c--cHHHHHHH----HHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCC
Q psy7343 278 IRIYQ---DV-----N--KTVEYARM----LERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQ 342 (487)
Q Consensus 278 iR~~~---d~-----~--~~~e~a~~----le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~ 342 (487)
..... +. - +..+.... ..+.|.++++... +.++++++.. +.+++..|||+
T Consensus 121 ~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~---------------~~i~~lr~~~~~~~i~v~gGI~ 185 (239)
T 1dbt_A 121 QLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV---------------HEAKAIYQAVSPSFLTVTPGIR 185 (239)
T ss_dssp SCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG---------------GGHHHHTTTSCTTCEEEECCBC
T ss_pred EcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH---------------HHHHHHHHhcCCCcEEEeCCcC
Confidence 32211 11 0 11222222 3567888865521 2356666666 36789999997
Q ss_pred CHHH----------HHHHHHhcCCcEEEeccccccCcc
Q psy7343 343 CLAD----------VEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 343 s~~d----------a~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
.... ..+++ +.|+|.+.+||+++..++
T Consensus 186 ~~~~~~~dq~rv~tp~~a~-~aGad~iVvGr~I~~a~d 222 (239)
T 1dbt_A 186 MSEDAANDQVRVATPAIAR-EKGSSAIVVGRSITKAED 222 (239)
T ss_dssp CTTSCCTTCSSCBCHHHHH-HTTCSEEEECHHHHTSSC
T ss_pred CCCCCccceeccCCHHHHH-HcCCCEEEEChhhcCCCC
Confidence 5432 25666 689999999999887554
No 436
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.30 E-value=0.23 Score=48.62 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=55.9
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+.....++.+.+.|+++|.+-|-|.+.. .++-.-..+.++.+.+.+ ++|||+.-|-.+.+++.++ .++.|||
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~-~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESP-TLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccc-cCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCC
Confidence 566778888889999999999966554432 121111124555555554 6899875444455555544 3357999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 100 avlv~~P~y~~~ 111 (292)
T 3daq_A 100 AIMLITPYYNKT 111 (292)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998776665
No 437
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=92.29 E-value=0.82 Score=42.56 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=45.3
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHH---H------HHHHHHhcCC
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLA---D------VEACLAQTGV 356 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~---d------a~~~l~~~Ga 356 (487)
.....++. .+.|+| +... .+.++++++.++.+ +..+||.-.. | ..+ + +.|+
T Consensus 127 ~v~~~a~~-~e~G~d-vV~~---------------~~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~~-i-~aGa 186 (213)
T 1vqt_A 127 YMDRIEKL-NKLGCD-FVLP---------------GPWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLEE-M-KGIA 186 (213)
T ss_dssp HHHHHHHH-HHHTCE-EECC---------------HHHHHHHTTTCCSC-EEECCBC---------CCBCHHH-H-TTTC
T ss_pred HHHHHHHH-hcCCCE-EEEc---------------HHHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHHH-H-HCCC
Confidence 45667778 889999 4331 14577788877777 7778886432 2 566 7 7899
Q ss_pred cEEEeccccccCcc
Q psy7343 357 AGVMTAEGNLYNPA 370 (487)
Q Consensus 357 d~VmiGRa~l~~P~ 370 (487)
|++.+||+++..++
T Consensus 187 d~iVvGR~I~~a~d 200 (213)
T 1vqt_A 187 NFAVLGREIYLSEN 200 (213)
T ss_dssp SEEEESHHHHTSSC
T ss_pred CEEEEChhhcCCCC
Confidence 99999999886644
No 438
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=92.24 E-value=0.26 Score=48.52 Aligned_cols=85 Identities=25% Similarity=0.260 Sum_probs=53.8
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEc-CCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIAN-GNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~n-GgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+. |+..+.+ +.++ .++.||
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~-ai~la~~A~~~Ga 108 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGTTGESP-TLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHA-SIDLTKKATEVGV 108 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHH-HHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHH-HHHHHHHHHhcCC
Confidence 445677888888899999999966554432 121111124455555544 6899864 5544444 4433 345799
Q ss_pred cEEEeccccccCc
Q psy7343 357 AGVMTAEGNLYNP 369 (487)
Q Consensus 357 d~VmiGRa~l~~P 369 (487)
|++++....+..|
T Consensus 109 davlv~~P~y~~~ 121 (301)
T 1xky_A 109 DAVMLVAPYYNKP 121 (301)
T ss_dssp SEEEEECCCSSCC
T ss_pred CEEEEcCCCCCCC
Confidence 9999998877665
No 439
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=92.20 E-value=0.71 Score=44.89 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=76.3
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARM 293 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~ 293 (487)
|.+.+.+.++.+.+..++ +...|.+|....-..+.-.++++.+.+ .+||++.+-- .+..+..+.++.
T Consensus 17 D~~~l~~lv~~li~~v~g----------l~v~GttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg~-~~t~~ai~la~~ 83 (283)
T 2pcq_A 17 DEEAFRELAQALEPLVDG----------LLVYGSNGEGVHLTPEERARGLRALRP--RKPFLVGLME-ETLPQAEGALLE 83 (283)
T ss_dssp CHHHHHHHHHHHGGGSSC----------CEETCTTTTGGGSCHHHHHHHHHTCCC--SSCCEEEECC-SSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCE----------EEECCcCcCchhcCHHHHHHHHHHHHh--CCcEEEeCCC-CCHHHHHHHHHH
Confidence 666777766644332443 445565676654456666778887776 7899987621 144578888999
Q ss_pred HHHcCCcEEEEEccccCCCCCC-CCCCCHHHHHHHHhhCCCcEEE-c-----CCCCCHHHHHHHH
Q psy7343 294 LERAGCQLLAVHGRTVDQRGMN-TGLASWEHITAVRKALTIPVIA-N-----GNIQCLADVEACL 351 (487)
Q Consensus 294 le~~G~d~I~VhgRt~~~~g~~-~g~~~~~~i~~i~~~~~iPVi~-n-----GgI~s~~da~~~l 351 (487)
+++.|+|++++..- ...+ . +.....+.++.|.+ ++||+. | |---+++.+.++.
T Consensus 84 A~~~Gadavlv~~P-~y~~--~~~~~~l~~~f~~va~--~lPiilYn~P~~tg~~l~~~~~~~La 143 (283)
T 2pcq_A 84 AKAAGAMALLATPP-RYYH--GSLGAGLLRYYEALAE--KMPLFLYHVPQNTKVDLPLEAVEALA 143 (283)
T ss_dssp HHHHTCSEEEECCC-CTTG--GGTTTHHHHHHHHHHH--HSCEEEEECHHHHCCCCCHHHHHHHT
T ss_pred HHhcCCCEEEecCC-cCCC--CCCHHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHh
Confidence 99999999999321 1000 0 11123467777777 899864 4 5446788877775
No 440
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.17 E-value=0.33 Score=51.06 Aligned_cols=71 Identities=23% Similarity=0.405 Sum_probs=55.9
Q ss_pred ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
.+..+.++.+.++|+|.|.++.-. | + ....++.++++++.+ ++||+. |++.+.+++..+. +.|+|+|.+|-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~----G-~-~~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~-~~G~d~I~v~~ 307 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAH----G-H-SRRVIETLEMIKADYPDLPVVA-GNVATPEGTEALI-KAGADAVKVGV 307 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSC----C-S-SHHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHH-HTTCSEEEECS
T ss_pred HhHHHHHHHHHHhCCCEEEEEecC----C-c-hHHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHH-HcCCCEEEEcC
Confidence 456778888999999999995321 1 1 112578999999998 799987 7899999998887 78999999954
No 441
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=92.14 E-value=0.31 Score=47.99 Aligned_cols=85 Identities=24% Similarity=0.295 Sum_probs=54.1
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEc-CCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIAN-GNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~n-GgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+.|+|+|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+. |+..+ +++.++ .++.||
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st-~~ai~la~~A~~~Ga 112 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGESP-TTTAAEKLELLKAVREEVGDRAKLIAGVGTNNT-RTSVELAEAAASAGA 112 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTTT-TSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCH-HHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCH-HHHHHHHHHHHhcCC
Confidence 455678888888899999999966654432 121111124455555544 6999854 55444 444433 345799
Q ss_pred cEEEeccccccCc
Q psy7343 357 AGVMTAEGNLYNP 369 (487)
Q Consensus 357 d~VmiGRa~l~~P 369 (487)
|++++....+..|
T Consensus 113 davlv~~P~y~~~ 125 (304)
T 3cpr_A 113 DGLLVVTPYYSKP 125 (304)
T ss_dssp SEEEEECCCSSCC
T ss_pred CEEEECCCCCCCC
Confidence 9999998876555
No 442
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.12 E-value=0.27 Score=48.22 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=54.3
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+.....++.+.+.|+++|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|||
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGTTGESA-TLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcc-cCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 445677888888899999999966554432 121111124455555544 6899865444445554443 3358999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 105 avlv~~P~y~~~ 116 (297)
T 3flu_A 105 YTLSVVPYYNKP 116 (297)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998776655
No 443
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=92.07 E-value=0.71 Score=46.88 Aligned_cols=120 Identities=16% Similarity=0.210 Sum_probs=79.4
Q ss_pred CCHHHHHHHHH-hhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccccccHHHH
Q psy7343 213 NDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 213 ~d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d~~~~~e~ 290 (487)
.+++++.+.++ .+++.+..+.+..| | ..|.+. ++++++++ ++.+.+-..-+|+.++. ++
T Consensus 160 ~~~~~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d~~~----v~avr~a~~~~~l~vDaN~~~~~~~a-~~ 220 (386)
T 1wue_A 160 EDLPQLLKQVQLAVEKGYQRVKLKIR-P-------------GYDVEP----VALIRQHFPNLPLMVDANSAYTLADL-PQ 220 (386)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECB-T-------------TBSHHH----HHHHHHHCTTSCEEEECTTCCCGGGH-HH
T ss_pred CCHHHHHHHHHHHHHhhhheEEEeeC-c-------------HHHHHH----HHHHHHhCCCCeEEEeCCCCCCHHHH-HH
Confidence 35777765554 44444555555433 1 124444 45555554 34444433335666677 88
Q ss_pred HHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 291 ARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 291 a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++++++..|- | + . ...+++..+++++.+++||.+.-.+.+..++.++++...+|.|++
T Consensus 221 ~~~l~~~~i~~iE-------q-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 281 (386)
T 1wue_A 221 LQRLDHYQLAMIE-------Q-P-F-AADDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINL 281 (386)
T ss_dssp HHGGGGSCCSCEE-------C-C-S-CTTCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred HHHHHhCCCeEEe-------C-C-C-CcccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 8888888877663 1 1 1 234688899999999999999889999999999997677898876
No 444
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=92.06 E-value=0.26 Score=48.58 Aligned_cols=86 Identities=26% Similarity=0.267 Sum_probs=55.2
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+...+.++.+.+.|+|+|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+.-|=.+.+++.++ .++.|||
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~-~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGESP-TTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchh-hCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 455678888888999999999966554432 121111124555555554 6899865444445555444 3357999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 113 avlv~~P~y~~~ 124 (304)
T 3l21_A 113 GLLVVTPYYSKP 124 (304)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877665
No 445
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=92.05 E-value=2 Score=42.29 Aligned_cols=139 Identities=16% Similarity=0.214 Sum_probs=87.1
Q ss_pred CCCCeeeeec-cCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEE-ee
Q psy7343 202 EDRPLIIQFC-GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCK-IR 279 (487)
Q Consensus 202 ~~~Pv~Vqi~-g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vK-iR 279 (487)
.+.||.+.+. |.+.+...++.+ ..|+- +-..+. --.+..|-+...++++.... .++.|-+- ++
T Consensus 73 ~~VPValHLDHg~~~e~~~~ai~---~GFtS----------VMiDgS-~~p~eeNi~~Tk~vv~~ah~-~gvsVEaELG~ 137 (307)
T 3n9r_A 73 PHIPVALHLDHGTTFESCEKAVK---AGFTS----------VMIDAS-HHAFEENLELTSKVVKMAHN-AGVSVEAELGR 137 (307)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHH---HTCSE----------EEECCT-TSCHHHHHHHHHHHHHHHHH-TTCEEEEEESC
T ss_pred CCCcEEEECCCCCCHHHHHHHHH---hCCCc----------EEEECC-CCCHHHHHHHHHHHHHHHHH-cCCeEEEEeee
Confidence 3579999998 666555444432 22322 222221 11223456667777765543 36666654 23
Q ss_pred cccc------------cccHHHHHHHHHHcCCcEEEEEccccCCCCCCC--C--CCCHHHHHHHHhhCCCcEEEcCCCCC
Q psy7343 280 IYQD------------VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT--G--LASWEHITAVRKALTIPVIANGNIQC 343 (487)
Q Consensus 280 ~~~d------------~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~--g--~~~~~~i~~i~~~~~iPVi~nGgI~s 343 (487)
+++. ..++++..+..+++|+|.+.+.=.|.-+. |. + .-+++.+++|++..++|++.-|+=.-
T Consensus 138 igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~--Yk~~~~p~Ld~~~L~~I~~~~~~PLVlHGgS~v 215 (307)
T 3n9r_A 138 LMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSHGA--FKFKGEPKLDFERLQEVKRLTNIPLVLHGASAI 215 (307)
T ss_dssp CCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCSSS--BCCSSSCCCCHHHHHHHHHHHCSCEEESSCCCC
T ss_pred eccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcccc--cCCCCCCccCHHHHHHHHhcCCCCeEEeCCCCc
Confidence 3321 13678888888999999998832332222 43 2 34789999998878999999998888
Q ss_pred HHHHHHHHHhcCCc
Q psy7343 344 LADVEACLAQTGVA 357 (487)
Q Consensus 344 ~~da~~~l~~~Gad 357 (487)
+++..+.+.++|-+
T Consensus 216 p~~~~~~~~~~gg~ 229 (307)
T 3n9r_A 216 PDNVRKSYLDAGGD 229 (307)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred chHHHHHHHHhcCc
Confidence 88888888777643
No 446
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=92.03 E-value=0.25 Score=48.99 Aligned_cols=86 Identities=16% Similarity=0.167 Sum_probs=54.7
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+...+.++.+.+.|+|+|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+.-|=.+.+++.++ .++.|||
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESA-TLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGG-GCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 445677888888899999999966554432 121111124455555544 6898865444445554443 3358999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 121 avlv~~P~y~~~ 132 (314)
T 3qze_A 121 ACLLVTPYYNKP 132 (314)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999998877665
No 447
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=92.03 E-value=0.63 Score=44.24 Aligned_cols=135 Identities=10% Similarity=0.067 Sum_probs=73.9
Q ss_pred CCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhh--cc--Cc--EEEE
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA--VQ--VP--VSCK 277 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~--~~--iP--V~vK 277 (487)
.++=+|+. ..++.....++.+.++ |+ ..++.|...| .+.+.+.++.+++. .+ .| +.++
T Consensus 58 v~lD~kl~-Dip~t~~~~~~~~~~~--------Ga-d~vTvH~~~g------~~~l~~~~~~~~~~~~~G~~~~~~lav~ 121 (246)
T 2yyu_A 58 VFLDLKLH-DIPNTVKQAMKGLARV--------GA-DLVNVHAAGG------RRMMEAAIEGLDAGTPSGRMRPRCIAVT 121 (246)
T ss_dssp EEEEEEEC-SCHHHHHHHHHHHHHT--------TC-SEEEEEGGGC------HHHHHHHHHHHHHHSCSSSCCCEEEEES
T ss_pred EEEEeecc-cchHHHHHHHHHHHhc--------CC-CEEEEECCCC------HHHHHHHHHHHHhhcccCCcCCCEEEEE
Confidence 44556675 5566655555555454 33 4455555433 33455666666652 23 34 2233
Q ss_pred eeccc---cc-------ccHHHHHHH----HHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC-CcEEEcCCCC
Q psy7343 278 IRIYQ---DV-------NKTVEYARM----LERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT-IPVIANGNIQ 342 (487)
Q Consensus 278 iR~~~---d~-------~~~~e~a~~----le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~-iPVi~nGgI~ 342 (487)
..... +. .+..+.... ..+.|.++++.. ..+ ++++++..+ .+++..|||+
T Consensus 122 ~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~--------------~~e-i~~lr~~~~~~~i~V~gGI~ 186 (246)
T 2yyu_A 122 QLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCS--------------ANE-AAFIKERCGASFLAVTPGIR 186 (246)
T ss_dssp SCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECC--------------HHH-HHHHHHHHCTTSEEEECCCC
T ss_pred eCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeC--------------HHH-HHHHHHhcCCCCEEEeCCcC
Confidence 21111 11 111222222 245788886541 134 667776653 5588999997
Q ss_pred CH-H---------HHHHHHHhcCCcEEEeccccccCcc
Q psy7343 343 CL-A---------DVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 343 s~-~---------da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
.. . .+.+++ +.|+|.+.+||+++..++
T Consensus 187 ~~g~~~~dq~rv~t~~~a~-~aGad~iVvGr~I~~a~d 223 (246)
T 2yyu_A 187 FADDAAHDQVRVVTPRKAR-ALGSDYIVIGRSLTRAAD 223 (246)
T ss_dssp CCC-------CCCCHHHHH-HHTCSEEEECHHHHTSSS
T ss_pred CCCCCcccccccCCHHHHH-HcCCCEEEECHhhcCCCC
Confidence 42 1 355666 689999999999887543
No 448
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=91.99 E-value=1.7 Score=43.79 Aligned_cols=82 Identities=11% Similarity=0.080 Sum_probs=55.8
Q ss_pred CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHHH
Q psy7343 214 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYA 291 (487)
Q Consensus 214 d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~a 291 (487)
|.+.+.+.++.+.+. |+ ..+..-|.+|....-..+.-.++++.+.+.+ .+||++.+-- .+..+..+.+
T Consensus 78 D~~al~~lv~~li~~--------Gv-~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~la 147 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQN--------GA-EGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGS-NSTREAIHAT 147 (360)
T ss_dssp CHHHHHHHHHHHHHT--------TC-CEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCC-SSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc--------CC-CEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC-CCHHHHHHHH
Confidence 667777777765554 44 4455566667655445555566776666654 5899986511 2456788889
Q ss_pred HHHHHcCCcEEEEE
Q psy7343 292 RMLERAGCQLLAVH 305 (487)
Q Consensus 292 ~~le~~G~d~I~Vh 305 (487)
+.+++.|+|++++.
T Consensus 148 ~~A~~~Gadavlvv 161 (360)
T 4dpp_A 148 EQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHTTCSEEEEE
T ss_pred HHHHHcCCCEEEEc
Confidence 99999999999994
No 449
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=91.97 E-value=0.53 Score=43.94 Aligned_cols=81 Identities=19% Similarity=0.265 Sum_probs=62.9
Q ss_pred cCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHH
Q psy7343 271 QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEAC 350 (487)
Q Consensus 271 ~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~ 350 (487)
..|++.=+|.. +.++..+.++.+.+.|++.|.+.-+ .....+.++++++.+.-.+++.|-+.+.+++...
T Consensus 15 ~~~~i~v~r~~-~~~~~~~~~~al~~gGv~~iel~~k---------~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A 84 (214)
T 1wbh_A 15 TGPVVPVIVVK-KLEHAVPMAKALVAGGVRVLNVTLR---------TECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEV 84 (214)
T ss_dssp SCSEEEEECCS-SGGGHHHHHHHHHHTTCCEEEEESC---------STTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHH
T ss_pred HCCEEEEEECC-CHHHHHHHHHHHHHcCCCEEEEeCC---------ChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHH
Confidence 34676666553 6678899999999999999999322 2233578888888875556777889999999999
Q ss_pred HHhcCCcEEEec
Q psy7343 351 LAQTGVAGVMTA 362 (487)
Q Consensus 351 l~~~Gad~VmiG 362 (487)
+ +.|||+|..|
T Consensus 85 ~-~aGAd~v~~p 95 (214)
T 1wbh_A 85 T-EAGAQFAISP 95 (214)
T ss_dssp H-HHTCSCEEES
T ss_pred H-HcCCCEEEcC
Confidence 9 7899999988
No 450
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=91.84 E-value=1.2 Score=41.25 Aligned_cols=130 Identities=16% Similarity=0.157 Sum_probs=77.6
Q ss_pred CeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEeecccc
Q psy7343 205 PLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQD 283 (487)
Q Consensus 205 Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~d 283 (487)
++++-+.-.+.++..+.++.++...|.+|+.+ |. +... | + ++++++++.. +.|+..-+-+. +
T Consensus 8 ~lilalD~~~~~~~~~~~~~~~~~vd~ie~g~--~~-~~~~---G------~----~~i~~lr~~~~~~~i~ld~~l~-d 70 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNVASYVDVIEVGT--IL-AFAE---G------M----KAVSTLRHNHPNHILVCDMKTT-D 70 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHHGGGCSEEEECH--HH-HHHH---T------T----HHHHHHHHHCTTSEEEEEEEEC-S
T ss_pred CeEEEeCCCCHHHHHHHHHHhcCCceEEEeCc--HH-HHhc---C------H----HHHHHHHHhCCCCcEEEEEeec-c
Confidence 45555555677888888777755578888753 21 1111 1 2 3555666663 55665543332 2
Q ss_pred cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCH-HHHHHHHhhCCCcEEE-cCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 284 VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASW-EHITAVRKALTIPVIA-NGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 284 ~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~-~~i~~i~~~~~iPVi~-nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
....+++.+.++|+|+|++|+-... ... +.++.+++ .+++.+. .=++.|.+++.++. +.|+|.+.+
T Consensus 71 --~p~~~~~~~~~aGad~i~vh~~~~~--------~~~~~~~~~~~~-~g~~~~~d~l~~~T~~~~~~~~-~~g~d~v~~ 138 (218)
T 3jr2_A 71 --GGAILSRMAFEAGADWITVSAAAHI--------ATIAACKKVADE-LNGEIQIEIYGNWTMQDAKAWV-DLGITQAIY 138 (218)
T ss_dssp --CHHHHHHHHHHHTCSEEEEETTSCH--------HHHHHHHHHHHH-HTCEEEEECCSSCCHHHHHHHH-HTTCCEEEE
T ss_pred --cHHHHHHHHHhcCCCEEEEecCCCH--------HHHHHHHHHHHH-hCCccceeeeecCCHHHHHHHH-HcCccceee
Confidence 3445778899999999999865311 111 33444444 3565543 33446788888887 569998776
Q ss_pred cc
Q psy7343 362 AE 363 (487)
Q Consensus 362 GR 363 (487)
..
T Consensus 139 ~~ 140 (218)
T 3jr2_A 139 HR 140 (218)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 451
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=91.82 E-value=0.8 Score=44.95 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHhhhccCcEEEE----eeccc------ccccHHHHHHHHHHcCCc----EEEEEccccCCCCCCCCCCCH
Q psy7343 256 WPLLTNLVSSLRQAVQVPVSCK----IRIYQ------DVNKTVEYARMLERAGCQ----LLAVHGRTVDQRGMNTGLASW 321 (487)
Q Consensus 256 ~~~i~eiv~~v~~~~~iPV~vK----iR~~~------d~~~~~e~a~~le~~G~d----~I~VhgRt~~~~g~~~g~~~~ 321 (487)
.+.+.+++++.. ..++|+.+- -|.+. |.+.....++...+.|+| .|-+ . |.
T Consensus 162 l~~la~vv~ea~-~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~-~--------y~----- 226 (307)
T 3fok_A 162 LEATAHAVNEAA-AAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKL-P--------VV----- 226 (307)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEE-E--------CC-----
T ss_pred HHHHHHHHHHHH-HcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEe-C--------Cc-----
Confidence 445555555544 348998774 22221 233456677888899999 8877 1 32
Q ss_pred HHHHHHHhhCCCcEEEcCCCC--CHHHHHHHHH---h-cCCcEEEeccccccC
Q psy7343 322 EHITAVRKALTIPVIANGNIQ--CLADVEACLA---Q-TGVAGVMTAEGNLYN 368 (487)
Q Consensus 322 ~~i~~i~~~~~iPVi~nGgI~--s~~da~~~l~---~-~Gad~VmiGRa~l~~ 368 (487)
+.++++.+...+||+..||=. +.+++.+..+ + .|+.|+.+||-++..
T Consensus 227 e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~ 279 (307)
T 3fok_A 227 EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYP 279 (307)
T ss_dssp TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSC
T ss_pred HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccC
Confidence 346888888999998877766 4566655543 4 699999999987763
No 452
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=91.81 E-value=0.29 Score=47.94 Aligned_cols=86 Identities=15% Similarity=0.139 Sum_probs=54.0
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHH---HhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACL---AQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l---~~~Gad 357 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+.=|=.+.+++.++. ++.|||
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGTTGESA-TLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCC
Confidence 445677888888899999999966554432 121111224455555544 68998643334445454443 247999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 99 avlv~~P~y~~~ 110 (292)
T 2ojp_A 99 GCLTVTPYYNRP 110 (292)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877665
No 453
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=91.76 E-value=0.6 Score=45.24 Aligned_cols=104 Identities=19% Similarity=0.212 Sum_probs=65.2
Q ss_pred HHHHHHHHHhhhccCcEEEEeecc-cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCC-----------------C
Q psy7343 258 LLTNLVSSLRQAVQVPVSCKIRIY-QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL-----------------A 319 (487)
Q Consensus 258 ~i~eiv~~v~~~~~iPV~vKiR~~-~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~-----------------~ 319 (487)
.+.+..+.+++.-...++.=+-.| ++.+.+.++++.+++.|+|.|.+ |--..+ +...|+ .
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iEl-GiPfSD-P~aDGpvIq~a~~rAL~~G~~~~~ 83 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALEL-GMPFSD-PLADGPTIQGANLRALAAKTTPDI 83 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEE-ECCCCC-GGGCCSHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE-CCCCCC-CCCCCHHHHHHHHHHHHcCCCHHH
Confidence 355556666554333444444333 35678999999999999999999 532110 111121 1
Q ss_pred CHHHHHHHHhh-CCCcEEEcCCCC-----CHHHHHHHHHhcCCcEEEecc
Q psy7343 320 SWEHITAVRKA-LTIPVIANGNIQ-----CLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 320 ~~~~i~~i~~~-~~iPVi~nGgI~-----s~~da~~~l~~~Gad~VmiGR 363 (487)
.++.++++++. .++|++.-|-.+ ..+...+...+.|+|++.+.-
T Consensus 84 ~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipD 133 (271)
T 3nav_A 84 CFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIAD 133 (271)
T ss_dssp HHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECC
Confidence 24788888887 799998865322 235555555579999999853
No 454
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=91.76 E-value=0.3 Score=47.75 Aligned_cols=86 Identities=23% Similarity=0.207 Sum_probs=54.6
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|||
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTGEAT-TMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVD 98 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCC
Confidence 555677888888899999999966655432 121111124455555544 6899864333444444433 3457999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 99 avlv~~P~y~~~ 110 (291)
T 3a5f_A 99 GLLVITPYYNKT 110 (291)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999998887666
No 455
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=91.75 E-value=0.75 Score=45.59 Aligned_cols=56 Identities=11% Similarity=-0.003 Sum_probs=44.2
Q ss_pred cCChHHHHHHHHHHhhhc-cCcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 253 QDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 253 ~~d~~~i~eiv~~v~~~~-~iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.-..+.+...++.|.+.+ ++||++-+..|. +..+..+.++.++++|+++|.|-+..
T Consensus 82 ~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~ 139 (318)
T 1zlp_A 82 LLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQV 139 (318)
T ss_dssp CSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBC
T ss_pred CCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCC
Confidence 345777778888888888 999999887653 44567778888999999999996654
No 456
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=91.75 E-value=0.29 Score=47.88 Aligned_cols=86 Identities=13% Similarity=0.124 Sum_probs=54.5
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+.....++.+.+.|+++|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|+|
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGTTGEAS-TLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccccc-cCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 455677888888899999999966554432 111111124455555544 6899865444445555443 3357999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 99 avlv~~P~y~~~ 110 (291)
T 3tak_A 99 AALLVTPYYNKP 110 (291)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999998777665
No 457
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=91.72 E-value=0.3 Score=48.14 Aligned_cols=85 Identities=16% Similarity=0.110 Sum_probs=53.7
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEE-cCCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIA-NGNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~-nGgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+ .|+..+.+ +.++ .++.||
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~-ai~la~~A~~~Ga 107 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGSTGEAF-VQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAE-SQQLAASAKRYGF 107 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHH-HHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECeeccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHH-HHHHHHHHHhCCC
Confidence 445677888888899999999966554432 121111124455555544 689985 45544444 4333 345799
Q ss_pred cEEEeccccccCc
Q psy7343 357 AGVMTAEGNLYNP 369 (487)
Q Consensus 357 d~VmiGRa~l~~P 369 (487)
|++++....+..|
T Consensus 108 davlv~~P~y~~~ 120 (303)
T 2wkj_A 108 DAVSAVTPFYYPF 120 (303)
T ss_dssp SEEEEECCCSSCC
T ss_pred CEEEecCCCCCCC
Confidence 9999998877655
No 458
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=91.63 E-value=0.31 Score=47.76 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=53.8
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEE-cCCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIA-NGNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~-nGgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+ .|+..+.+ +.++ .++.||
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~-ai~la~~A~~~Ga 99 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGTTGEGC-SVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIED-AADQSAEALNAGA 99 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHH-HHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHH-HHHHHHHHHhcCC
Confidence 445677888888899999999966554432 121111225555566655 589875 45555444 4333 335799
Q ss_pred cEEEeccccccC
Q psy7343 357 AGVMTAEGNLYN 368 (487)
Q Consensus 357 d~VmiGRa~l~~ 368 (487)
|++++....+..
T Consensus 100 davlv~~P~y~~ 111 (294)
T 3b4u_A 100 RNILLAPPSYFK 111 (294)
T ss_dssp SEEEECCCCSSC
T ss_pred CEEEEcCCcCCC
Confidence 999999877655
No 459
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=91.61 E-value=2.3 Score=42.82 Aligned_cols=120 Identities=14% Similarity=0.109 Sum_probs=78.7
Q ss_pred CHHHHHHHH-HhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc--cCcEEEEeecccccccHHHH
Q psy7343 214 DSKNLTEAA-KLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEY 290 (487)
Q Consensus 214 d~~~~~~aa-~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~--~iPV~vKiR~~~d~~~~~e~ 290 (487)
+.+++.+.+ +.+++.|..+-+..|. +++.-.+.++++++++ ++.+.+...-+++.++..++
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~~~~a~~~ 207 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGR----------------EPEKDPERVRAAREAIGESVELMVDANGAYTRKQALYW 207 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS----------------SGGGHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 445555444 4445556655554331 2333345566677665 34454443334666778888
Q ss_pred HHHHHHc-CCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC--CcEEEcCCCCCHHHHHHHHHhcCCcEEEe
Q psy7343 291 ARMLERA-GCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT--IPVIANGNIQCLADVEACLAQTGVAGVMT 361 (487)
Q Consensus 291 a~~le~~-G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~--iPVi~nGgI~s~~da~~~l~~~Gad~Vmi 361 (487)
++.++++ ++..|-= + . ...+++..+++++.++ +||.+.-.+.+..++.++ ...+|.+++
T Consensus 208 ~~~l~~~~~i~~iEq--------P-~-~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~i~i 269 (372)
T 3cyj_A 208 AGAFAREAGISYLEE--------P-V-SSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AGCVDILQA 269 (372)
T ss_dssp HHHHHHHHCCCEEEC--------S-S-CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HTTCSEEEE
T ss_pred HHHHHhhcCCcEEEC--------C-C-CcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hCCCCEEec
Confidence 9999998 8886631 1 1 2347899999999887 799998899999998887 567888875
No 460
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=91.53 E-value=1 Score=44.19 Aligned_cols=108 Identities=18% Similarity=0.159 Sum_probs=71.3
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCC-CCCHHHHHHH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG-LASWEHITAV 327 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g-~~~~~~i~~i 327 (487)
|+....+.+++.+ +. .++.||.+|--..-+.++....++.+.+.|.+-|++.=|+.. . .|.. ..|+..+..+
T Consensus 138 gA~~~~n~~LLr~----va-~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~-y-~~~~~~vdl~~i~~l 210 (298)
T 3fs2_A 138 PAFLCRQTDLLIA----AA-RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVS-F-GYNTLVSDMRALPIM 210 (298)
T ss_dssp CGGGTTCHHHHHH----HH-HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEE-C-SSSCEECCTTHHHHH
T ss_pred CccccCCHHHHHH----HH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC-C-CCCCCccCHHHHHHH
Confidence 4444567776655 32 468999999755446678889999999999987877445432 1 1332 2578888889
Q ss_pred HhhCCCcEEEc---------------CCCCCH--HHHHHHHHhcCCcEEEecccc
Q psy7343 328 RKALTIPVIAN---------------GNIQCL--ADVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 328 ~~~~~iPVi~n---------------GgI~s~--~da~~~l~~~Gad~VmiGRa~ 365 (487)
++ .+.||++. ||.+.. .-+.... ..||||++|=+-+
T Consensus 211 k~-~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAv-AlGAdGl~IE~H~ 263 (298)
T 3fs2_A 211 AG-LGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAV-AVGVAGFFIETHE 263 (298)
T ss_dssp HT-TTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHH-HHCCSEEEEEEES
T ss_pred HH-cCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHH-HcCCCEEEEEecC
Confidence 98 89999983 232221 2233444 5799999987643
No 461
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=91.53 E-value=0.31 Score=47.68 Aligned_cols=87 Identities=15% Similarity=0.045 Sum_probs=54.5
Q ss_pred ccccHHHHHHHHHH-cCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLER-AGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~-~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+ .|+|+|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|+
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 100 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGSTGENF-MLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGY 100 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCccccchh-hCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 44567788888889 9999999966655432 121111224455555544 6999864333344444433 335799
Q ss_pred cEEEeccccccCcc
Q psy7343 357 AGVMTAEGNLYNPA 370 (487)
Q Consensus 357 d~VmiGRa~l~~P~ 370 (487)
|++++....+..|.
T Consensus 101 davlv~~P~y~~~~ 114 (293)
T 1f6k_A 101 DCLSAVTPFYYKFS 114 (293)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988776653
No 462
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=91.48 E-value=1.6 Score=41.08 Aligned_cols=87 Identities=15% Similarity=0.230 Sum_probs=52.6
Q ss_pred CCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccc
Q psy7343 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQD 283 (487)
Q Consensus 204 ~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d 283 (487)
.++++-+.-.+.++..+.++.+....+.+.++.+. . .. +| ++.+. .+++..+.+|+.-..+. |
T Consensus 13 ~~lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg~~l--f-~~---~G------~~~v~----~l~~~~g~~v~lD~Kl~-D 75 (228)
T 3m47_A 13 NRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPL--V-LS---EG------MDIIA----EFRKRFGCRIIADFKVA-D 75 (228)
T ss_dssp GGEEEECCCCSHHHHHHHHHTTTTTCSEEEEEHHH--H-HH---HC------THHHH----HHHHHHCCEEEEEEEEC-S
T ss_pred CCeEEEeCCCCHHHHHHHHHHcCCcccEEEEcHHH--H-Hh---cC------HHHHH----HHHhcCCCeEEEEEeec-c
Confidence 35666665566666677777666556777775433 1 11 12 34433 45443244555544344 5
Q ss_pred cc-cHHHHHHHHHHcCCcEEEEEcc
Q psy7343 284 VN-KTVEYARMLERAGCQLLAVHGR 307 (487)
Q Consensus 284 ~~-~~~e~a~~le~~G~d~I~VhgR 307 (487)
+. +...+++.+.+.|+|.|+||+-
T Consensus 76 ipnTv~~~~~~~~~~gad~vtvh~~ 100 (228)
T 3m47_A 76 IPETNEKICRATFKAGADAIIVHGF 100 (228)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEST
T ss_pred cHhHHHHHHHHHHhCCCCEEEEecc
Confidence 54 4566888889999999999964
No 463
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=91.43 E-value=1.4 Score=42.88 Aligned_cols=102 Identities=16% Similarity=0.175 Sum_probs=56.7
Q ss_pred HHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc-cc-ccHHH----HHH
Q psy7343 220 EAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ-DV-NKTVE----YAR 292 (487)
Q Consensus 220 ~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~-d~-~~~~e----~a~ 292 (487)
-.|++++++ +|.| +- |--...+..|. -..+.-..+......++|++.++.|+++ ..++. +. .+..+ ..+
T Consensus 45 ~sA~l~e~aG~d~i-lv-GdSl~~~~lG~-~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgsy~~s~~~a~~na~r 120 (281)
T 1oy0_A 45 STARIFDEAGIPVL-LV-GDSAANVVYGY-DTTVPISIDELIPLVRGVVRGAPHALVV-ADLPFGSYEAGPTAALAAATR 120 (281)
T ss_dssp HHHHHHHTTTCCEE-EE-CTTHHHHTTCC-SSSSSCCGGGTHHHHHHHHHHCTTSEEE-EECCTTSSTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEE-EE-CHHHHHHHcCC-CCCCCCCHHHHHHHHHHHHhcCCCCeEE-EECCCCcccCCHHHHHHHHHH
Confidence 346667676 6766 22 32122233332 2222334566666677788888777665 44432 21 13333 466
Q ss_pred HHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEE
Q psy7343 293 MLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVI 336 (487)
Q Consensus 293 ~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi 336 (487)
.++++|+++|.+-|. ....+.|+.+.+. +|||+
T Consensus 121 l~~eaGa~aVklEdg----------~e~~~~I~al~~a-gIpV~ 153 (281)
T 1oy0_A 121 FLKDGGAHAVKLEGG----------ERVAEQIACLTAA-GIPVM 153 (281)
T ss_dssp HHHTTCCSEEEEEBS----------GGGHHHHHHHHHH-TCCEE
T ss_pred HHHHhCCeEEEECCc----------HHHHHHHHHHHHC-CCCEE
Confidence 777799999999442 1123556666543 78887
No 464
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=91.42 E-value=1.1 Score=43.37 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=57.7
Q ss_pred HHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCc-EEEEeeccc---ccccHHHHHHHHH
Q psy7343 221 AAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVP-VSCKIRIYQ---DVNKTVEYARMLE 295 (487)
Q Consensus 221 aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iP-V~vKiR~~~---d~~~~~e~a~~le 295 (487)
.|++++++ +|.| +- |--...+..|. -..+.-..+......++|++.++.| |++-+-.+. +.++..+-+..+.
T Consensus 29 sA~l~e~aG~d~i-lv-GdSl~~~~lG~-~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 105 (275)
T 1o66_A 29 FAALMDDAGVEML-LV-GDSLGMAVQGR-KSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAELM 105 (275)
T ss_dssp HHHHHHHTTCCEE-EE-CTTHHHHTTCC-SSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEE-EE-CHHHHHHHcCC-CCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHHHHHH
Confidence 45666666 6666 22 32122233332 2223345677777778888888765 444443321 2334445556777
Q ss_pred HcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEE
Q psy7343 296 RAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVI 336 (487)
Q Consensus 296 ~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi 336 (487)
++|+++|.+-+. ....+.|+.+.+ .+|||+
T Consensus 106 kaGa~aVklEdg----------~e~~~~I~al~~-agIpV~ 135 (275)
T 1o66_A 106 AAGAHMVKLEGG----------VWMAETTEFLQM-RGIPVC 135 (275)
T ss_dssp HTTCSEEEEECS----------GGGHHHHHHHHH-TTCCEE
T ss_pred HcCCcEEEECCc----------HHHHHHHHHHHH-cCCCeE
Confidence 899999999442 112355666554 488987
No 465
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=91.42 E-value=0.26 Score=48.91 Aligned_cols=86 Identities=16% Similarity=0.083 Sum_probs=55.0
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+...+.++.+.+.|+|+|.+-|-|.+.. .++-.-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|||
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~-~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGA-YLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 445678888888899999999966554432 121111124555555544 6898865443445554443 3357999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 122 avlv~~P~y~~~ 133 (315)
T 3na8_A 122 AVMVLPISYWKL 133 (315)
T ss_dssp EEEECCCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877665
No 466
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=91.39 E-value=0.65 Score=45.70 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=61.6
Q ss_pred ChHHHHHHHHHHhhhc-cCcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccccCCC-CCCCCCC--CH-HHHHHHH
Q psy7343 255 DWPLLTNLVSSLRQAV-QVPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRTVDQR-GMNTGLA--SW-EHITAVR 328 (487)
Q Consensus 255 d~~~i~eiv~~v~~~~-~iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt~~~~-g~~~g~~--~~-~~i~~i~ 328 (487)
.++.+...++.|.+.. ++||++-+..|. +..+..+.++.++++|+++|.|-+.....+ |...|.. .. +.+.+|+
T Consensus 63 t~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~ 142 (302)
T 3fa4_A 63 TLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIR 142 (302)
T ss_dssp CHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHH
Confidence 4566666667777664 899999987763 344567778889999999999966543211 1122221 22 4444443
Q ss_pred hh------CCCcEEEcCCCCCH-----HHHHHH---HHhcCCcEEEe
Q psy7343 329 KA------LTIPVIANGNIQCL-----ADVEAC---LAQTGVAGVMT 361 (487)
Q Consensus 329 ~~------~~iPVi~nGgI~s~-----~da~~~---l~~~Gad~Vmi 361 (487)
.. .+.+++.+....+. +++.+- ..+.|||++.+
T Consensus 143 Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi 189 (302)
T 3fa4_A 143 AAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAARDAGADVGFL 189 (302)
T ss_dssp HHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEee
Confidence 32 23444544444433 333221 22579999998
No 467
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=91.39 E-value=3.4 Score=38.66 Aligned_cols=140 Identities=14% Similarity=0.228 Sum_probs=90.6
Q ss_pred CCCeeeeec---c---CCHHHHHHHHH---hhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccC
Q psy7343 203 DRPLIIQFC---G---NDSKNLTEAAK---LAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQV 272 (487)
Q Consensus 203 ~~Pv~Vqi~---g---~d~~~~~~aa~---~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~i 272 (487)
+.||-|=|| | .+.+++..+.+ .+.+. +|+|-+ || .+..| .-|.+...+++++.. +.
T Consensus 54 ~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~--G~---Lt~dg------~iD~~~~~~Li~~a~---~~ 119 (224)
T 2bdq_A 54 GISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVL--GI---LTSNN------HIDTEAIEQLLPATQ---GL 119 (224)
T ss_dssp TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEE--CC---BCTTS------SBCHHHHHHHHHHHT---TC
T ss_pred CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEE--ee---ECCCC------CcCHHHHHHHHHHhC---CC
Confidence 578888876 2 45666655433 44444 666655 55 12222 247888898887643 67
Q ss_pred cEEEEeeccccc--ccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHH
Q psy7343 273 PVSCKIRIYQDV--NKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVE 348 (487)
Q Consensus 273 PV~vKiR~~~d~--~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~ 348 (487)
+++.- |..+.. .+..+..+.+.+.|++.|.-||-.... .-....+.++++.+.. ++-|++.|||+ .+.+.
T Consensus 120 ~vTFH-RAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~~----~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~-~~Ni~ 193 (224)
T 2bdq_A 120 PLVFH-MAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGE----PIIENIKHIKALVEYANNRIEIMVGGGVT-AENYQ 193 (224)
T ss_dssp CEEEC-GGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCC----CGGGGHHHHHHHHHHHTTSSEEEECSSCC-TTTHH
T ss_pred eEEEE-CchhccCCcCHHHHHHHHHHcCCCEEECCCCCCCC----cHHHHHHHHHHHHHhhCCCeEEEeCCCCC-HHHHH
Confidence 77775 444344 677888999999999999876643221 0112356666665432 67788888886 46777
Q ss_pred HHHHhcCCcEEEec
Q psy7343 349 ACLAQTGVAGVMTA 362 (487)
Q Consensus 349 ~~l~~~Gad~VmiG 362 (487)
++++.+|++.+-..
T Consensus 194 ~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 194 YICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHTCCEEEET
T ss_pred HHHHhhCCCEEccc
Confidence 88878999988854
No 468
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=91.34 E-value=4.3 Score=38.81 Aligned_cols=138 Identities=17% Similarity=0.218 Sum_probs=84.4
Q ss_pred CCC-eeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhc-cCcEEEEee
Q psy7343 203 DRP-LIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIR 279 (487)
Q Consensus 203 ~~P-v~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~-~iPV~vKiR 279 (487)
+.| +.|-+.+.+.+++.+-++.+... +|.||+=+.. . .+ ..+.+.+.+.+..+++.+ ++|+++.+|
T Consensus 18 g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~-l----~~------~~~~~~v~~~l~~lr~~~~~lPiI~T~R 86 (258)
T 4h3d_A 18 GRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDF-F----EN------VENIKEVKEVLYELRSYIHDIPLLFTFR 86 (258)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGG-C----TT------TTCHHHHHHHHHHHHHHCTTSCEEEECC
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeecc-c----cc------cCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 455 55668888888887766666554 8999987654 1 11 136778888888888876 699999999
Q ss_pred ccc-------ccccHHHHHHHHHHcC-CcEEEEEccccCCCCCCCCCCCHHHHHHHH---hhCCCcEEEcC----CCCCH
Q psy7343 280 IYQ-------DVNKTVEYARMLERAG-CQLLAVHGRTVDQRGMNTGLASWEHITAVR---KALTIPVIANG----NIQCL 344 (487)
Q Consensus 280 ~~~-------d~~~~~e~a~~le~~G-~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~---~~~~iPVi~nG----gI~s~ 344 (487)
..+ +.+...++.+.+.+.| +|+|.|--.. .-+.++++. +.-+..||++- +--+.
T Consensus 87 t~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~-----------~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~ 155 (258)
T 4h3d_A 87 SVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELFM-----------GDEVIDEVVNFAHKKEVKVIISNHDFNKTPKK 155 (258)
T ss_dssp CGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGG-----------CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCH
T ss_pred chhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhc-----------cHHHHHHHHHHHHhCCCEEEEEEecCCCCCCH
Confidence 732 2234555556666666 8999983211 112333332 23466677642 33344
Q ss_pred HHHHHHH---HhcCCcEEEec
Q psy7343 345 ADVEACL---AQTGVAGVMTA 362 (487)
Q Consensus 345 ~da~~~l---~~~Gad~VmiG 362 (487)
+++.+.+ ...|||-+=++
T Consensus 156 ~el~~~~~~~~~~gaDIvKia 176 (258)
T 4h3d_A 156 EEIVSRLCRMQELGADLPKIA 176 (258)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEE
Confidence 5554443 24677766544
No 469
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=91.29 E-value=0.26 Score=48.81 Aligned_cols=86 Identities=14% Similarity=0.155 Sum_probs=54.7
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+...+.++.+.+.|+|+|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|||
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~~-~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGESP-TLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCcc-ccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 455678888888899999999966554432 121111124455555544 6898865444445554443 3358999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 120 avlv~~P~y~~~ 131 (315)
T 3si9_A 120 AVLVVTPYYNRP 131 (315)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877665
No 470
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=91.25 E-value=4.5 Score=39.69 Aligned_cols=67 Identities=6% Similarity=0.053 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCC-CcEEEcCCCCCHH----------HHHHHHHhcCC
Q psy7343 288 VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT-IPVIANGNIQCLA----------DVEACLAQTGV 356 (487)
Q Consensus 288 ~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~-iPVi~nGgI~s~~----------da~~~l~~~Ga 356 (487)
...++...+.|+++|..++. + ++.+++.++ -.++..+||+-.. .+.+++ ..|+
T Consensus 161 ~~lA~~a~~~G~dGvV~s~~--------------E-~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~-~aGA 224 (303)
T 3ru6_A 161 INFSKISYENGLDGMVCSVF--------------E-SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMAR-ENLS 224 (303)
T ss_dssp HHHHHHHHHTTCSEEECCTT--------------T-HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHH-HTTC
T ss_pred HHHHHHHHHcCCCEEEECHH--------------H-HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHH-HcCC
Confidence 45677778899999876211 1 456777763 4577788887221 244556 6899
Q ss_pred cEEEeccccccCcc
Q psy7343 357 AGVMTAEGNLYNPA 370 (487)
Q Consensus 357 d~VmiGRa~l~~P~ 370 (487)
|.+.+||++...++
T Consensus 225 d~iVvGr~I~~a~d 238 (303)
T 3ru6_A 225 DYIVVGRPIYKNEN 238 (303)
T ss_dssp SEEEECHHHHTSSC
T ss_pred CEEEEChHHhCCCC
Confidence 99999999887544
No 471
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=91.23 E-value=1.2 Score=43.13 Aligned_cols=95 Identities=17% Similarity=0.244 Sum_probs=61.2
Q ss_pred CHHHHHHHHH-hhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHH
Q psy7343 214 DSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYAR 292 (487)
Q Consensus 214 d~~~~~~aa~-~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~ 292 (487)
+.+...+.|+ ++++..|.||||++.+. ...++.+..+++++++.+++|+++-. .+ .+.++
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~------------~eE~~rv~~vi~~l~~~~~~pisIDT------~~-~~v~~ 92 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTA------------DDPVRVMEWLVKTIQEVVDLPCCLDS------TN-PDAIE 92 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCS------------SCHHHHHHHHHHHHHHHCCCCEEEEC------SC-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCc------------hhHHHHHHHHHHHHHHhCCCeEEEeC------CC-HHHHH
Confidence 4455555444 55566999999976621 23588899999999988899999864 23 34444
Q ss_pred HHHHc--CCcEEE-EEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEE
Q psy7343 293 MLERA--GCQLLA-VHGRTVDQRGMNTGLASWEHITAVRKALTIPVIA 337 (487)
Q Consensus 293 ~le~~--G~d~I~-VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~ 337 (487)
...++ |++.|. |++- ...++.+..+.+..+.|+++
T Consensus 93 aal~a~~Ga~iINdvs~~----------~d~~~~~~~~~a~~~~~vv~ 130 (271)
T 2yci_X 93 AGLKVHRGHAMINSTSAD----------QWKMDIFFPMAKKYEAAIIG 130 (271)
T ss_dssp HHHHHCCSCCEEEEECSC----------HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHhCCCCCEEEECCCC----------ccccHHHHHHHHHcCCCEEE
Confidence 44445 998886 5221 11234444555566888887
No 472
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.14 E-value=0.79 Score=44.30 Aligned_cols=104 Identities=15% Similarity=0.171 Sum_probs=64.7
Q ss_pred HHHHHHHHHhhhccCcEEEEeecc-cccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCC-----------------C
Q psy7343 258 LLTNLVSSLRQAVQVPVSCKIRIY-QDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL-----------------A 319 (487)
Q Consensus 258 ~i~eiv~~v~~~~~iPV~vKiR~~-~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~-----------------~ 319 (487)
.+.+..+.+++.-...++.-+-.| ++.+.+.++++.+++.|+|.|.+ |--..+ +...|+ .
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iEl-giPfSD-P~aDGp~Iq~a~~~AL~~G~~~~~ 81 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALEL-GFPFSD-PLADGPVIQGANLRSLAAGTTSSD 81 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEE-ECCCSC-CTTCCHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE-CCCCCC-CCCCCHHHHHHHHHHHHcCCCHHH
Confidence 345555556544333444443333 34578999999999999999999 521110 011111 1
Q ss_pred CHHHHHHHHhh-CCCcEEEcCCCC-----CHHHHHHHHHhcCCcEEEecc
Q psy7343 320 SWEHITAVRKA-LTIPVIANGNIQ-----CLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 320 ~~~~i~~i~~~-~~iPVi~nGgI~-----s~~da~~~l~~~Gad~VmiGR 363 (487)
.++.++++++. .++|++.-|-.+ ..+...+...+.|+|++.+.-
T Consensus 82 ~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~D 131 (267)
T 3vnd_A 82 CFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIAD 131 (267)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCC
Confidence 25788888887 899998865322 125555555578999999854
No 473
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=91.13 E-value=0.3 Score=48.74 Aligned_cols=86 Identities=16% Similarity=0.091 Sum_probs=54.2
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEE-cCCCCCHHHHHH--HHHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIA-NGNIQCLADVEA--CLAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~-nGgI~s~~da~~--~l~~~Gad 357 (487)
|.+.....++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+ .|+..+.+.++. ..++.|||
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGSTGIYM-YLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 445677888888899999999966554432 121111224555555554 699985 565555444332 23457999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++....+..|
T Consensus 132 avlv~~P~Y~~~ 143 (332)
T 2r8w_A 132 ALLLAPVSYTPL 143 (332)
T ss_dssp EEEECCCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877655
No 474
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=91.10 E-value=0.98 Score=43.49 Aligned_cols=107 Identities=11% Similarity=0.078 Sum_probs=61.3
Q ss_pred chhhhcChhHHHHHHhcCCCCCCeeeeeccC-CHHHHHHHHHhhCCcCcEEEeecCCCcceeeccC--cc-ccc--cCCh
Q psy7343 183 AHQFIADKKLRQEILMSTPEDRPLIIQFCGN-DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGH--YG-AYL--QDDW 256 (487)
Q Consensus 183 ~~~Ll~~~~~~~~~l~~~~~~~Pv~Vqi~g~-d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr--~G-~~l--~~d~ 256 (487)
++..+.+....+++- ..+.||.+|-... +.+++..++..+... |++.-...+-+ .. .+- .-|.
T Consensus 113 ga~~~~n~~ll~~~a---~~~kPV~lk~G~~~t~~e~~~Av~~i~~~--------Gn~~i~L~~RG~~~~~~y~~~~v~L 181 (262)
T 1zco_A 113 GARNSQNFELLKEVG---KVENPVLLKRGMGNTIQELLYSAEYIMAQ--------GNENVILCERGIRTFETATRFTLDI 181 (262)
T ss_dssp CGGGTTCHHHHHHHT---TSSSCEEEECCTTCCHHHHHHHHHHHHTT--------TCCCEEEEECCBCCSCCSSSSBCCT
T ss_pred CcccccCHHHHHHHH---hcCCcEEEecCCCCCHHHHHHHHHHHHHC--------CCCeEEEEECCCCCCCCcChhhcCH
Confidence 344455554444433 3578999998865 899999999888766 44332222211 00 111 1122
Q ss_pred HHHHHHHHHHhhhccCcEEEEeecccccc-cHHHHHHHHHHcCCcEEEE
Q psy7343 257 PLLTNLVSSLRQAVQVPVSCKIRIYQDVN-KTVEYARMLERAGCQLLAV 304 (487)
Q Consensus 257 ~~i~eiv~~v~~~~~iPV~vKiR~~~d~~-~~~e~a~~le~~G~d~I~V 304 (487)
.. +..+++..+.||++.-.-..+.. -...+++.....|+++|+|
T Consensus 182 ~a----i~~lk~~~~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~i 226 (262)
T 1zco_A 182 SA----VPVVKELSHLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMV 226 (262)
T ss_dssp TH----HHHHHHHBSSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEE
T ss_pred HH----HHHHHhhhCCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEE
Confidence 22 33366666899877542221121 2236677778899999988
No 475
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=91.05 E-value=0.32 Score=48.81 Aligned_cols=86 Identities=14% Similarity=0.077 Sum_probs=54.2
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|||
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEFS-QLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 445677888888899999999966554432 111111124455555544 6899864333344444443 3357999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++-...+..|
T Consensus 129 avlv~~P~Y~~~ 140 (343)
T 2v9d_A 129 GIVVINPYYWKV 140 (343)
T ss_dssp EEEEECCSSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877666
No 476
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=91.05 E-value=0.28 Score=48.14 Aligned_cols=85 Identities=20% Similarity=0.210 Sum_probs=54.2
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEE-cCCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIA-NGNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~-nGgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+ .|+..+ +++.++ .++.||
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t-~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGESP-TLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNP-VEAVRYAQHAQQAGA 96 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSH-HHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchh-hCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCH-HHHHHHHHHHHhcCC
Confidence 556678888889999999999966654432 121111124455555544 689875 455444 444433 345799
Q ss_pred cEEEeccccccCc
Q psy7343 357 AGVMTAEGNLYNP 369 (487)
Q Consensus 357 d~VmiGRa~l~~P 369 (487)
|++++....+..|
T Consensus 97 davlv~~P~y~~~ 109 (297)
T 2rfg_A 97 DAVLCVAGYYNRP 109 (297)
T ss_dssp SEEEECCCTTTCC
T ss_pred CEEEEcCCCCCCC
Confidence 9999998877655
No 477
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=91.05 E-value=1.4 Score=43.03 Aligned_cols=56 Identities=13% Similarity=0.154 Sum_probs=44.5
Q ss_pred cCChHHHHHHHHHHhhhccCcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 253 QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 253 ~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.-..+.+...++.|.+.+++||++-+..|. +..+..+.++.++++|+++|.+-+..
T Consensus 57 ~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~ 113 (290)
T 2hjp_A 57 ILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKT 113 (290)
T ss_dssp CSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCC
Confidence 346777888888898899999999886652 44567778888999999999996654
No 478
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=90.98 E-value=0.75 Score=44.52 Aligned_cols=73 Identities=18% Similarity=0.219 Sum_probs=55.8
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccC---CCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEE
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVD---QRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGV 359 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~---~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~V 359 (487)
...+-++..|++|+.+||+--|-.. ..|+.....+.+.|++|++.+++||++==.|....+++.+. ..|+|.|
T Consensus 19 ~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ~~EAqile-a~GaD~I 94 (291)
T 3o07_A 19 VTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIE-ALEVDYI 94 (291)
T ss_dssp SSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHH-HTTCSEE
T ss_pred CCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH-HcCCCEE
Confidence 5577889999999999999533211 22233345688999999999999999977777777776655 7999988
No 479
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=90.96 E-value=1.7 Score=41.23 Aligned_cols=136 Identities=15% Similarity=0.147 Sum_probs=74.3
Q ss_pred CCCeeeeeccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhcc-Cc-EE-EEee
Q psy7343 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ-VP-VS-CKIR 279 (487)
Q Consensus 203 ~~Pv~Vqi~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~-iP-V~-vKiR 279 (487)
..++=+|+. ..++.....++.+.++ |+ ..++.|...| .+.+..+++.+++.-. .| ++ ++..
T Consensus 67 ~v~lD~kl~-Dip~t~~~~i~~~~~~--------Ga-d~vTvH~~~g------~~~l~~~~~~~~~~G~~~~~~l~v~~~ 130 (245)
T 1eix_A 67 DIFLDLKFH-DIPNTAAHAVAAAADL--------GV-WMVNVHASGG------ARMMTAAREALVPFGKDAPLLIAVTVL 130 (245)
T ss_dssp CEEEEEEEC-SCHHHHHHHHHHHHHH--------TC-SEEEEBGGGC------HHHHHHHHHTTGGGGGGCCEEEEECSC
T ss_pred cEEEEeecc-ccHHHHHHHHHHHHhC--------CC-CEEEEeccCC------HHHHHHHHHHHHHcCCCCCcEEEEEec
Confidence 345557775 5566655555555455 33 4455665433 2335566666554311 24 22 2221
Q ss_pred cccccc---------cHHHHHHH----HHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHH
Q psy7343 280 IYQDVN---------KTVEYARM----LERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLA 345 (487)
Q Consensus 280 ~~~d~~---------~~~e~a~~----le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~ 345 (487)
...+.. +..+.... ..+.|.++++... ++ ++++++.. +.+++..|||+...
T Consensus 131 ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~--------------~e-i~~lr~~~~~~~i~v~gGI~~~g 195 (245)
T 1eix_A 131 TSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSA--------------QE-AVRFKQVFGQEFKLVTPGIRPQG 195 (245)
T ss_dssp TTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCG--------------GG-HHHHHHHHCSSSEEEECCBCCTT
T ss_pred CCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCH--------------HH-HHHHHHhcCCCCEEEECCcCCCC
Confidence 111100 11222222 3457888865511 24 56666655 46889999998431
Q ss_pred ----------HHHHHHHhcCCcEEEeccccccCcc
Q psy7343 346 ----------DVEACLAQTGVAGVMTAEGNLYNPA 370 (487)
Q Consensus 346 ----------da~~~l~~~Gad~VmiGRa~l~~P~ 370 (487)
.+.+++ +.|+|.+.+||+++..++
T Consensus 196 ~~~~dq~rv~t~~~a~-~aGad~iVvGr~I~~a~d 229 (245)
T 1eix_A 196 SEAGDQRRIMTPEQAL-SAGVDYMVIGRPVTQSVD 229 (245)
T ss_dssp CCCTTCCSCBCHHHHH-HTTCSEEEECHHHHTSSS
T ss_pred CCccchhccCCHHHHH-HcCCCEEEECHHHcCCCC
Confidence 356666 689999999999887643
No 480
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=90.87 E-value=0.95 Score=44.18 Aligned_cols=56 Identities=14% Similarity=0.145 Sum_probs=44.2
Q ss_pred cCChHHHHHHHHHHhhhccCcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccc
Q psy7343 253 QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRT 308 (487)
Q Consensus 253 ~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt 308 (487)
.-..+.....++.|.+.+++||++-+..|. +..+..+.++.++++|+++|.|-+..
T Consensus 64 ~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~ 120 (287)
T 3b8i_A 64 LITLSEFVEQATRIGRVARLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTL 120 (287)
T ss_dssp CSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCC
Confidence 346777888888888899999999886652 44566777888899999999996654
No 481
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=90.86 E-value=0.74 Score=45.34 Aligned_cols=85 Identities=20% Similarity=0.206 Sum_probs=53.9
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+...+.++.+.+.|+|+|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+.-|-.+.+++.++ .++.|||
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 111 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGSNGEFP-FLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGAD 111 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSGGGTGG-GSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchh-hCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 445677788888899999999966655432 122111225566666665 6898864343444444433 3358999
Q ss_pred EEEeccccccC
Q psy7343 358 GVMTAEGNLYN 368 (487)
Q Consensus 358 ~VmiGRa~l~~ 368 (487)
++++-...+..
T Consensus 112 avlv~~P~y~~ 122 (307)
T 3s5o_A 112 AAMVVTPCYYR 122 (307)
T ss_dssp EEEEECCCTTG
T ss_pred EEEEcCCCcCC
Confidence 99998776653
No 482
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=90.77 E-value=1.1 Score=44.91 Aligned_cols=112 Identities=8% Similarity=0.069 Sum_probs=75.4
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~ 328 (487)
|+.-+.|.+++.++- ..+.||+++.-+. +.+++..+++.+.+.|.+.+.+|+-+.... .....|+..+..++
T Consensus 131 ~S~~~~n~~LL~~va-----~~gkPviLstGma-t~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~--~~~~~nL~ai~~lk 202 (349)
T 2wqp_A 131 GSGECNNYPLIKLVA-----SFGKPIILSTGMN-SIESIKKSVEIIREAGVPYALLHCTNIYPT--PYEDVRLGGMNDLS 202 (349)
T ss_dssp CGGGTTCHHHHHHHH-----TTCSCEEEECTTC-CHHHHHHHHHHHHHHTCCEEEEECCCCSSC--CGGGCCTHHHHHHH
T ss_pred CcccccCHHHHHHHH-----hcCCeEEEECCCC-CHHHHHHHHHHHHHcCCCEEEEeccCCCCC--ChhhcCHHHHHHHH
Confidence 333456888877643 2589999998554 667888888888899998888886432221 12335788999999
Q ss_pred hhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEeccccccCccc
Q psy7343 329 KAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371 (487)
Q Consensus 329 ~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGRa~l~~P~l 371 (487)
+.. ++||..++--....-+.... ..||+ +|=+-+--|..+
T Consensus 203 ~~f~~lpVg~sdHt~G~~~~~AAv-AlGA~--iIEkH~tld~a~ 243 (349)
T 2wqp_A 203 EAFPDAIIGLSDHTLDNYACLGAV-ALGGS--ILERHFTDRMDR 243 (349)
T ss_dssp HHCTTSEEEEECCSSSSHHHHHHH-HHTCC--EEEEEBCSCTTC
T ss_pred HHCCCCCEEeCCCCCcHHHHHHHH-HhCCC--EEEeCCCccccC
Confidence 999 99998764333344445555 57999 555554444443
No 483
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=90.73 E-value=0.79 Score=44.51 Aligned_cols=107 Identities=19% Similarity=0.203 Sum_probs=68.2
Q ss_pred cCChHHHHHHHHHHhhhccCcEEEEeeccc--ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCH----HHHHH
Q psy7343 253 QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ--DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASW----EHITA 326 (487)
Q Consensus 253 ~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~--d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~----~~i~~ 326 (487)
.-..+.....++.|.+.+++||++-+..|. +..+..+.++.++++|+++|.+-+...... ...... +.|+.
T Consensus 58 ~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~---k~l~~~~e~~~~I~a 134 (275)
T 2ze3_A 58 TLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTP---TELYDLDSQLRRIEA 134 (275)
T ss_dssp SSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSS---SCBCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCC---CccCCHHHHHHHHHH
Confidence 345777777888888888999999887763 345677888889999999999965432110 111122 44444
Q ss_pred HHhh---CCCcEEEcCCCCC--------H-HHHHHHH------HhcCCcEEEec
Q psy7343 327 VRKA---LTIPVIANGNIQC--------L-ADVEACL------AQTGVAGVMTA 362 (487)
Q Consensus 327 i~~~---~~iPVi~nGgI~s--------~-~da~~~l------~~~Gad~VmiG 362 (487)
+++. .++|+..+|.... . +.+.+++ ++.|||++.+=
T Consensus 135 a~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e 188 (275)
T 2ze3_A 135 ARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVP 188 (275)
T ss_dssp HHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECT
T ss_pred HHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEEC
Confidence 4444 2677776665544 1 2233332 35799999873
No 484
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=90.61 E-value=0.41 Score=47.24 Aligned_cols=82 Identities=18% Similarity=0.122 Sum_probs=52.8
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEc-CCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIAN-GNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~n-GgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+.|+|+|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+. |+..+.+ +.++ .++.||
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~-~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~-ai~la~~A~~~Ga 104 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQF-AITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQV-CAARSLRAQQLGA 104 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHH-HHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCcc-cCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHH-HHHHHHHHHHcCC
Confidence 455678888888899999999966554432 121111224555555554 6999965 5555444 4433 335799
Q ss_pred cEEEeccccc
Q psy7343 357 AGVMTAEGNL 366 (487)
Q Consensus 357 d~VmiGRa~l 366 (487)
|++++-...+
T Consensus 105 davlv~~Pyy 114 (309)
T 3fkr_A 105 AMVMAMPPYH 114 (309)
T ss_dssp SEEEECCSCB
T ss_pred CEEEEcCCCC
Confidence 9999998765
No 485
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=90.57 E-value=0.6 Score=46.14 Aligned_cols=86 Identities=19% Similarity=0.155 Sum_probs=56.1
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHH---HhcCC-
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACL---AQTGV- 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l---~~~Ga- 356 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+.-|=.+.+++.++. ++.|+
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~-~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~ 104 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGTTAESP-TLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGF 104 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESSTTTTGG-GSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCC
Confidence 556788889999999999999966554432 121111224555666665 68998754444555555443 34586
Q ss_pred cEEEeccccccCc
Q psy7343 357 AGVMTAEGNLYNP 369 (487)
Q Consensus 357 d~VmiGRa~l~~P 369 (487)
|++++....+..|
T Consensus 105 davlv~~P~y~~~ 117 (311)
T 3h5d_A 105 AAGLAIVPYYNKP 117 (311)
T ss_dssp SEEEEECCCSSCC
T ss_pred cEEEEcCCCCCCC
Confidence 9999998877665
No 486
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=90.55 E-value=1.3 Score=44.19 Aligned_cols=121 Identities=17% Similarity=0.274 Sum_probs=80.3
Q ss_pred eccCCHHHHHHHHHhhCCcCcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccc-ccccHH
Q psy7343 210 FCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQ-DVNKTV 288 (487)
Q Consensus 210 i~g~d~~~~~~aa~~~~~~~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~-d~~~~~ 288 (487)
+...+++++.+.++...+.+..+-+..|. ..| .+.++++++..+..+.+-..-+| +..+..
T Consensus 130 ~~~~~~e~~~~~a~~~~~g~~~~K~Kvg~--------------~~d----~~~v~avR~~~~~~l~vDaN~~~t~~~~A~ 191 (338)
T 3ijl_A 130 IGIDTPDVVRAKTKECAGLFNILKVKLGR--------------DND----KEMIETIRSVTDLPIAVDANQGWKDRQYAL 191 (338)
T ss_dssp CCCCCHHHHHHHHHHHHTTCSSEEEECSS--------------SCH----HHHHHHHHTTCCCCEEEECTTCCCCHHHHH
T ss_pred EeCCCHHHHHHHHHHHHhcccEEEEecCc--------------HHH----HHHHHHHHhhcCCcEEEECcCCCCCHHHHH
Confidence 34457888877666543245555554432 012 34566788877655555443356 467788
Q ss_pred HHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEE
Q psy7343 289 EYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 289 e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~Vm 360 (487)
++++.+++.++..|- | + . ...+++..+++++.+++||.+.-.+.+..|+.+++ ..+|.++
T Consensus 192 ~~~~~l~~~~i~~iE-------e-P-~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~d~i~ 251 (338)
T 3ijl_A 192 DMIHWLKEKGIVMIE-------Q-P-M-PKEQLDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAFTGIN 251 (338)
T ss_dssp HHHHHHHHTTEEEEE-------C-C-S-CTTCHHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTBSEEE
T ss_pred HHHHHHhhCCCCEEE-------C-C-C-CCCcHHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhCCEEE
Confidence 999999998866542 1 1 1 23468899999999999999988999999887765 3567665
No 487
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=90.54 E-value=0.39 Score=47.22 Aligned_cols=86 Identities=13% Similarity=0.143 Sum_probs=55.2
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC---CCcEEEcCCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL---TIPVIANGNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~---~iPVi~nGgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++-.-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|+
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~-~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Ga 104 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGESA-TLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGA 104 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTGG-GSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 556778888889999999999966554432 121111124455555543 5899875444445555443 335799
Q ss_pred cEEEeccccccCc
Q psy7343 357 AGVMTAEGNLYNP 369 (487)
Q Consensus 357 d~VmiGRa~l~~P 369 (487)
|++++-...+..|
T Consensus 105 davlv~~P~y~~~ 117 (301)
T 3m5v_A 105 DGILSVAPYYNKP 117 (301)
T ss_dssp SEEEEECCCSSCC
T ss_pred CEEEEcCCCCCCC
Confidence 9999998877766
No 488
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=90.47 E-value=0.58 Score=44.07 Aligned_cols=133 Identities=14% Similarity=0.173 Sum_probs=74.8
Q ss_pred eeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeeccccc
Q psy7343 206 LIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDV 284 (487)
Q Consensus 206 v~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~ 284 (487)
++..|...|..++.+..+.+++. .|.|++-. ..|.+-. +...-.++++.+++.++.|+.+-+-+
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi-------~DG~fvp----~~~~g~~~v~~lr~~~~~~~~vhlmv---- 71 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDV-------MDGRFVP----NITIGPLIVDAIRPLTKKTLDVHLMI---- 71 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEE-------EBSSSSS----CBCBCHHHHHHHGGGCCSEEEEEEES----
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEE-------EecCCCc----chhhhHHHHHHHHhhcCCcEEEEEEc----
Confidence 45566666777777777777665 66654432 1111100 11111256667887777787765422
Q ss_pred ccHHHHHHHHHHcCCcEEEEEcc--ccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 285 NKTVEYARMLERAGCQLLAVHGR--TVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 285 ~~~~e~a~~le~~G~d~I~VhgR--t~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~da~~~l~~~Gad~VmiG 362 (487)
.+..++.+.+.++|+|+|++|.- .. ....+.++.+++. ++-+...=.-.|+.+..+.+ ..++|.|.++
T Consensus 72 ~dp~~~i~~~~~aGadgv~vh~e~~~~--------~~~~~~~~~i~~~-g~~~gv~~~p~t~~e~~~~~-~~~~D~v~~m 141 (230)
T 1tqj_A 72 VEPEKYVEDFAKAGADIISVHVEHNAS--------PHLHRTLCQIREL-GKKAGAVLNPSTPLDFLEYV-LPVCDLILIM 141 (230)
T ss_dssp SSGGGTHHHHHHHTCSEEEEECSTTTC--------TTHHHHHHHHHHT-TCEEEEEECTTCCGGGGTTT-GGGCSEEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEECcccccc--------hhHHHHHHHHHHc-CCcEEEEEeCCCcHHHHHHH-HhcCCEEEEE
Confidence 23455678888999999999843 21 1123556666553 44333322444555444433 3489988776
Q ss_pred c
Q psy7343 363 E 363 (487)
Q Consensus 363 R 363 (487)
.
T Consensus 142 s 142 (230)
T 1tqj_A 142 S 142 (230)
T ss_dssp S
T ss_pred E
Confidence 5
No 489
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=90.44 E-value=1.2 Score=42.69 Aligned_cols=84 Identities=13% Similarity=0.133 Sum_probs=56.3
Q ss_pred HHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCH
Q psy7343 265 SLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCL 344 (487)
Q Consensus 265 ~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~ 344 (487)
.+++.+++||..|- -+.+..++.+ +..+|+|+|.+.+.... ...+..+-+..+.+++.+++ ++.|.
T Consensus 95 ~ir~~v~lPvLrKD----fi~~~~qi~e-a~~~GAD~ilLi~a~l~-------~~~l~~l~~~a~~lGl~~lv--Ev~~~ 160 (251)
T 1i4n_A 95 AARNLTCRPILAKD----FYIDTVQVKL-ASSVGADAILIIARILT-------AEQIKEIYEAAEELGMDSLV--EVHSR 160 (251)
T ss_dssp HHHTTCCSCEEEEC----CCCSTHHHHH-HHHTTCSEEEEEGGGSC-------HHHHHHHHHHHHTTTCEEEE--EECSH
T ss_pred HHHHhCCCCEEEee----CCCCHHHHHH-HHHcCCCEEEEecccCC-------HHHHHHHHHHHHHcCCeEEE--EeCCH
Confidence 46778899999883 1223335554 77899999998554211 11232233333446888887 88999
Q ss_pred HHHHHHHHhc-CCcEEEecc
Q psy7343 345 ADVEACLAQT-GVAGVMTAE 363 (487)
Q Consensus 345 ~da~~~l~~~-Gad~VmiGR 363 (487)
+++++.+ .. |+|.|.+--
T Consensus 161 eE~~~A~-~l~g~~iIGinn 179 (251)
T 1i4n_A 161 EDLEKVF-SVIRPKIIGINT 179 (251)
T ss_dssp HHHHHHH-TTCCCSEEEEEC
T ss_pred HHHHHHH-hcCCCCEEEEeC
Confidence 9999999 78 999887753
No 490
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=90.43 E-value=0.3 Score=47.75 Aligned_cols=85 Identities=19% Similarity=0.162 Sum_probs=54.6
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEE-cCCCCCHHHHHHH---HHhcCC
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIA-NGNIQCLADVEAC---LAQTGV 356 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~-nGgI~s~~da~~~---l~~~Ga 356 (487)
|.+...+.++.+.+.|+|+|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+ .|+..+.+ +.++ .++.||
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~-~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~-ai~la~~A~~~Ga 96 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGESP-TLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAE-AIAFVRHAQNAGA 96 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTGG-GSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHH-HHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChh-hCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHH-HHHHHHHHHHcCC
Confidence 556778888889999999999966554432 121111224455555544 689875 45555544 4333 345799
Q ss_pred cEEEeccccccCc
Q psy7343 357 AGVMTAEGNLYNP 369 (487)
Q Consensus 357 d~VmiGRa~l~~P 369 (487)
|++++....+..|
T Consensus 97 davlv~~P~y~~~ 109 (292)
T 2vc6_A 97 DGVLIVSPYYNKP 109 (292)
T ss_dssp SEEEEECCCSSCC
T ss_pred CEEEEcCCCCCCC
Confidence 9999998877655
No 491
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=90.39 E-value=0.75 Score=45.35 Aligned_cols=109 Identities=12% Similarity=0.106 Sum_probs=62.8
Q ss_pred CChHHHHHHHHHHhhhcc--CcEEEEeeccc-ccccHHHHHHHHHHcCCcEEEEEccccCCC-CCCCCCC--CH-HHHHH
Q psy7343 254 DDWPLLTNLVSSLRQAVQ--VPVSCKIRIYQ-DVNKTVEYARMLERAGCQLLAVHGRTVDQR-GMNTGLA--SW-EHITA 326 (487)
Q Consensus 254 ~d~~~i~eiv~~v~~~~~--iPV~vKiR~~~-d~~~~~e~a~~le~~G~d~I~VhgRt~~~~-g~~~g~~--~~-~~i~~ 326 (487)
-.++.+...++.|.+..+ +||++-+..|. +..+..+.++.++++|+++|.|-+.....+ |...|.. .. +.+.+
T Consensus 69 vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~r 148 (307)
T 3lye_A 69 AQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVR 148 (307)
T ss_dssp SCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHH
T ss_pred CCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHH
Confidence 346666667777777654 99999887653 344567778889999999999965543211 1112221 22 44444
Q ss_pred HHh---h---CCCcEEEcCCCCCH-----HHH-HHH--HHhcCCcEEEec
Q psy7343 327 VRK---A---LTIPVIANGNIQCL-----ADV-EAC--LAQTGVAGVMTA 362 (487)
Q Consensus 327 i~~---~---~~iPVi~nGgI~s~-----~da-~~~--l~~~Gad~VmiG 362 (487)
|+. . .+.+++.++..... +++ ++. ..+.|||++.+=
T Consensus 149 I~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~ 198 (307)
T 3lye_A 149 IRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLE 198 (307)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEec
Confidence 432 2 24455555555443 222 222 225899999984
No 492
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=90.36 E-value=3.6 Score=39.26 Aligned_cols=123 Identities=22% Similarity=0.203 Sum_probs=0.0
Q ss_pred HHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEEEeec-cccc-------ccHHH
Q psy7343 219 TEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRI-YQDV-------NKTVE 289 (487)
Q Consensus 219 ~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~-~~d~-------~~~~e 289 (487)
.+-+..+++. .|-|||+.+- .-+.+......+.. +++.+++||.+=+|. ++|. +...+
T Consensus 11 ~~~a~~A~~~GAdRIELc~~L---------~~GGlTPS~g~i~~----~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~ 77 (256)
T 1twd_A 11 MECALTAQQNGADRVELCAAP---------KEGGLTPSLGVLKS----VRQRVTIPVHPIIRPRGGDFCYSDGEFAAILE 77 (256)
T ss_dssp HHHHHHHHHTTCSEEEECBCG---------GGTCBCCCHHHHHH----HHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCc---------ccCCCCCCHHHHHH----HHHHcCCceEEEECCCCCCCcCCHHHHHHHHH
Q ss_pred HHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEc---CCCCCHHHHHHHHHhcCCcEEE
Q psy7343 290 YARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIAN---GNIQCLADVEACLAQTGVAGVM 360 (487)
Q Consensus 290 ~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~n---GgI~s~~da~~~l~~~Gad~Vm 360 (487)
-++.+.+.|+|+|.+ |--..+ |..|.+.++++.+.. +.|+..- =-+.++..+.+.+.+.|++.|.
T Consensus 78 Di~~~~~~GadGvV~-G~Lt~d-----g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rIL 146 (256)
T 1twd_A 78 DVRTVRELGFPGLVT-GVLDVD-----GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVL 146 (256)
T ss_dssp HHHHHHHTTCSEEEE-CCBCTT-----SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCCEEEE-eeECCC-----CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEE
No 493
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=90.29 E-value=0.5 Score=47.70 Aligned_cols=86 Identities=13% Similarity=0.091 Sum_probs=53.5
Q ss_pred ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHH---HHhcCCc
Q psy7343 283 DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEAC---LAQTGVA 357 (487)
Q Consensus 283 d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~---l~~~Gad 357 (487)
|.+...+.++.+.+.|+++|.+.|-|.+.. .++..-..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|||
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GTTGE~~-~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 156 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGTTGEGQ-LMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMH 156 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTGG-GSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccccChh-hCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 445677888888899999999966554432 111111124455555544 6899874333344444443 3357999
Q ss_pred EEEeccccccCc
Q psy7343 358 GVMTAEGNLYNP 369 (487)
Q Consensus 358 ~VmiGRa~l~~P 369 (487)
++++-...+..|
T Consensus 157 avlvv~PyY~k~ 168 (360)
T 4dpp_A 157 AALHINPYYGKT 168 (360)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999988766555
No 494
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=90.22 E-value=0.45 Score=47.86 Aligned_cols=67 Identities=19% Similarity=0.205 Sum_probs=49.9
Q ss_pred HHHHHHHHc--CCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC-CCcEEEcCCCCCHHHHHHHHHhcCCcEEEecc
Q psy7343 289 EYARMLERA--GCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363 (487)
Q Consensus 289 e~a~~le~~--G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~-~iPVi~nGgI~s~~da~~~l~~~Gad~VmiGR 363 (487)
+.++.+.+. |++.+.+|... + . ....|+.++++++.. ++||++ |+|.|.++++++. +.|+|+|.++-
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~----g-~-~~~~~~~i~~lr~~~~~~~vi~-g~v~t~e~A~~a~-~aGaD~I~v~~ 190 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVAN----G-Y-SEHFVEFVKDVRKRFPQHTIMA-GNVVTGEMVEELI-LSGADIIKVGI 190 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSC----T-T-BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHH-HTTCSEEEECS
T ss_pred HHHHHHHhccCCCCEEEEEecC----C-C-cHHHHHHHHHHHHhcCCCeEEE-EeCCCHHHHHHHH-HhCCCEEEECC
Confidence 344455555 99999887421 1 1 112468899999998 899986 7899999999998 79999998863
No 495
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=90.18 E-value=0.83 Score=42.96 Aligned_cols=90 Identities=17% Similarity=0.132 Sum_probs=64.6
Q ss_pred HHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEc
Q psy7343 259 LTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIAN 338 (487)
Q Consensus 259 i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~n 338 (487)
..++++.+++ .|++.=+|.. +.++..+.++.+.+.|++.|.+.-+ .....+.++++++.+.--+++.
T Consensus 16 ~~~~~~~l~~---~~ii~V~r~~-~~~~~~~~~~al~~gGv~~iel~~k---------~~~~~~~i~~l~~~~~~~~iga 82 (225)
T 1mxs_A 16 AARIDAICEK---ARILPVITIA-REEDILPLADALAAGGIRTLEVTLR---------SQHGLKAIQVLREQRPELCVGA 82 (225)
T ss_dssp HHHHHHHHHH---HSEEEEECCS-CGGGHHHHHHHHHHTTCCEEEEESS---------STHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHH---CCEEEEEeCC-CHHHHHHHHHHHHHCCCCEEEEecC---------CccHHHHHHHHHHhCcccEEee
Confidence 3444444443 3566655543 6678899999999999999999311 2223577888888774345666
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEec
Q psy7343 339 GNIQCLADVEACLAQTGVAGVMTA 362 (487)
Q Consensus 339 GgI~s~~da~~~l~~~Gad~VmiG 362 (487)
|-+.+.+++...+ ..|||+|.+|
T Consensus 83 gtvl~~d~~~~A~-~aGAd~v~~p 105 (225)
T 1mxs_A 83 GTVLDRSMFAAVE-AAGAQFVVTP 105 (225)
T ss_dssp ECCCSHHHHHHHH-HHTCSSEECS
T ss_pred CeEeeHHHHHHHH-HCCCCEEEeC
Confidence 7799999999999 7899999987
No 496
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=90.10 E-value=0.39 Score=44.95 Aligned_cols=72 Identities=8% Similarity=-0.003 Sum_probs=53.5
Q ss_pred cHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCH-HHHHHHHHhcCCcEEEeccc
Q psy7343 286 KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCL-ADVEACLAQTGVAGVMTAEG 364 (487)
Q Consensus 286 ~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~-~da~~~l~~~Gad~VmiGRa 364 (487)
.....++..++.|++++.+.+. ..+.++.+++.++-.++..+||+.. .+..+++ +.|+|.+.+||+
T Consensus 116 ~v~~~a~~a~~~G~~GvV~sat------------~~~e~~~ir~~~~~f~~v~pGI~~~g~~~~~a~-~~Gad~iVvGr~ 182 (215)
T 3ve9_A 116 FYPYLREVARRVNPKGFVAPAT------------RPSMISRVKGDFPDKLVISPGVGTQGAKPGIAL-CHGADYEIVGRS 182 (215)
T ss_dssp GHHHHHHHHHHHCCSEEECCTT------------SHHHHHHHHHHCTTSEEEECCTTSTTCCTTHHH-HTTCSEEEECHH
T ss_pred HHHHHHHHHHHcCCCceeeCCC------------CHHHHHHHHHhCCCcEEEcCCCCcCcCCHHHHH-HcCCCEEEeCHH
Confidence 4678899999999999988221 2345777887774367788999742 1566677 689999999999
Q ss_pred cccCcc
Q psy7343 365 NLYNPA 370 (487)
Q Consensus 365 ~l~~P~ 370 (487)
++..++
T Consensus 183 I~~a~d 188 (215)
T 3ve9_A 183 VYQSAD 188 (215)
T ss_dssp HHTSSS
T ss_pred HcCCCC
Confidence 887644
No 497
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=89.76 E-value=4.9 Score=41.28 Aligned_cols=151 Identities=14% Similarity=0.081 Sum_probs=84.5
Q ss_pred CCeeeeec-c-CCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhh---ccCcEEEE
Q psy7343 204 RPLIIQFC-G-NDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA---VQVPVSCK 277 (487)
Q Consensus 204 ~Pv~Vqi~-g-~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~---~~iPV~vK 277 (487)
.||++-+- | .++.+..+.++.++++ ..+|.|-=... .-.+.|..++.-+.+.+...+-+++++++ .+.++.++
T Consensus 153 lPviaD~DtGyG~~~~v~~tv~~~~~aGaaGi~IEDq~~-~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~Ii 231 (435)
T 3lg3_A 153 LPIVADAEAGFGGVLNAFELMKAMIEAGAAGVHFEDQLA-AVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLI 231 (435)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEESBCG-GGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCeEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEecCCC-CccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 89999986 3 3555677777777666 77777753321 01122322232233455444444445433 36777777
Q ss_pred eeccc--------------------------------ccccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHH
Q psy7343 278 IRIYQ--------------------------------DVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHIT 325 (487)
Q Consensus 278 iR~~~--------------------------------d~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~ 325 (487)
-|..- +.++.++-++...+ |+|.|.++. +..+.+-++
T Consensus 232 ARTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~----------~~~~~~ei~ 300 (435)
T 3lg3_A 232 ARTDADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCET----------STPDLALAK 300 (435)
T ss_dssp EEECTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECC----------SSCCHHHHH
T ss_pred EEcCCccccccccccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecC----------CCCCHHHHH
Confidence 77641 22344555556667 999999943 334566666
Q ss_pred HHHhhCC----CcE-EEcCC-CCC------HHHHHHH---HHhcCCcEEEeccccc
Q psy7343 326 AVRKALT----IPV-IANGN-IQC------LADVEAC---LAQTGVAGVMTAEGNL 366 (487)
Q Consensus 326 ~i~~~~~----iPV-i~nGg-I~s------~~da~~~---l~~~Gad~VmiGRa~l 366 (487)
++.+.++ ..+ .+|.. ..+ .++++.+ |.+.|+..+.++-+.+
T Consensus 301 ~f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~~ 356 (435)
T 3lg3_A 301 RFADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAGI 356 (435)
T ss_dssp HHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHHH
T ss_pred HHHHHhccccCCeEEEeCCCCCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHHH
Confidence 6665543 333 34432 232 3444332 4467999888885543
No 498
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.69 E-value=12 Score=36.33 Aligned_cols=142 Identities=15% Similarity=0.162 Sum_probs=84.3
Q ss_pred cCCCCCCeeeeeccCCHHHHHHHHHhhCCc-CcEEEeecCCCcceeeccCccccccCChHHHHHHHHHHhhhccCcEEE-
Q psy7343 199 STPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSC- 276 (487)
Q Consensus 199 ~~~~~~Pv~Vqi~g~d~~~~~~aa~~~~~~-~d~IdiN~GcP~~i~~~gr~G~~l~~d~~~i~eiv~~v~~~~~iPV~v- 276 (487)
......||++.+.+++.++..+.++.+++. +|++=+ ....|- ..+.+.+.+..++|.+++++||++
T Consensus 69 ~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv---------~~P~y~---~~~~~~l~~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 69 AAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILA---------ILEAYF---PLKDAQIESYFRAIADAVEIPVVIY 136 (300)
T ss_dssp HHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEE---------EECCSS---CCCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE---------cCCCCC---CCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 345568999999988999999999988887 554432 222121 125677788888888889999987
Q ss_pred Eee--cccccccHHHHHHHHHHcC-CcEEEEEccccCCCCCCCCCCCHHHHHHHHhhC--CCcEEEcCCCCCHHHHHHHH
Q psy7343 277 KIR--IYQDVNKTVEYARMLERAG-CQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL--TIPVIANGNIQCLADVEACL 351 (487)
Q Consensus 277 KiR--~~~d~~~~~e~a~~le~~G-~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~--~iPVi~nGgI~s~~da~~~l 351 (487)
|+. .+.+. + .+....+.+.+ +-+|-- ...++..+.++.+.. ++.| ++|+=.. +...+
T Consensus 137 n~P~~tg~~l-~-~~~~~~La~~pnIvgiKd------------ssgd~~~~~~~~~~~~~~f~v-~~G~d~~---~~~~l 198 (300)
T 3eb2_A 137 TNPQFQRSDL-T-LDVIARLAEHPRIRYIKD------------ASTNTGRLLSIINRCGDALQV-FSASAHI---PAAVM 198 (300)
T ss_dssp ECTTTCSSCC-C-HHHHHHHHTSTTEEEEEE------------CSSBHHHHHHHHHHHGGGSEE-EECTTSC---HHHHH
T ss_pred ECccccCCCC-C-HHHHHHHHcCCCEEEEEc------------CCCCHHHHHHHHHHcCCCeEE-EeCcHHH---HHHHH
Confidence 542 22222 2 34444444432 222221 112566666666554 3444 4454332 34455
Q ss_pred HhcCCcEEEeccccccCcccc
Q psy7343 352 AQTGVAGVMTAEGNLYNPALF 372 (487)
Q Consensus 352 ~~~Gad~VmiGRa~l~~P~lf 372 (487)
..|++|++.+.+.+ -|.++
T Consensus 199 -~~G~~G~is~~an~-~P~~~ 217 (300)
T 3eb2_A 199 -LIGGVGWMAGPACI-APRQS 217 (300)
T ss_dssp -HTTCCEEEEGGGGT-CHHHH
T ss_pred -hCCCCEEEeChhhh-hHHHH
Confidence 57999999887754 24443
No 499
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=89.66 E-value=8.5 Score=36.72 Aligned_cols=90 Identities=17% Similarity=0.271 Sum_probs=63.9
Q ss_pred cCcEEEEeec-cc---c-cccHHHHHHHHHHcCCcEEEEEccccCCCCCCCCCCCHHHHHHHHhhCCCcEEEcCCCCCHH
Q psy7343 271 QVPVSCKIRI-YQ---D-VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLA 345 (487)
Q Consensus 271 ~iPV~vKiR~-~~---d-~~~~~e~a~~le~~G~d~I~VhgRt~~~~g~~~g~~~~~~i~~i~~~~~iPVi~nGgI~s~~ 345 (487)
...|++-+.- ++ . ..+..++++.. +.|+++|.|- |... ++.| ..+.+.++++.+++||.---=|-++-
T Consensus 45 ~~~iIAEiKraSPSkg~i~~dp~~iA~~~-~~GA~aiSVL--Td~~--~F~G--s~~~L~~vr~~v~lPvLrKDFiid~y 117 (258)
T 4a29_A 45 ITAIIAVYERKSPSGLDVERDPIEYAKFM-ERYAVGLSIT--TEEK--YFNG--SYETLRKIASSVSIPILMSDFIVKES 117 (258)
T ss_dssp CCCEEEEECSBCTTSCBCCCCHHHHHHHH-TTTCSEEEEE--CCST--TTCC--CHHHHHHHHTTCSSCEEEESCCCSHH
T ss_pred CcEEEEEEecCCCCCCCccCCHHHHHHHH-hCCCeEEEEe--CCCC--CCCC--CHHHHHHHHHhcCCCEeeccccccHH
Confidence 4567764432 11 1 23577888755 5799999883 2222 2444 57889999999999999988889999
Q ss_pred HHHHHHHhcCCcEEEeccccccC
Q psy7343 346 DVEACLAQTGVAGVMTAEGNLYN 368 (487)
Q Consensus 346 da~~~l~~~Gad~VmiGRa~l~~ 368 (487)
++.+.. ..|||+|.+=-+++.+
T Consensus 118 QI~eAr-~~GADaILLI~a~L~~ 139 (258)
T 4a29_A 118 QIDDAY-NLGADTVLLIVKILTE 139 (258)
T ss_dssp HHHHHH-HHTCSEEEEEGGGSCH
T ss_pred HHHHHH-HcCCCeeehHHhhcCH
Confidence 998887 6899999876555544
No 500
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=89.65 E-value=1.4 Score=42.98 Aligned_cols=108 Identities=17% Similarity=0.188 Sum_probs=70.3
Q ss_pred cccccCChHHHHHHHHHHhhhccCcEEEEeecccccccHHHHHHHHHHcCC------cEEEEEccccCCCCCCCC-CCCH
Q psy7343 249 GAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGC------QLLAVHGRTVDQRGMNTG-LASW 321 (487)
Q Consensus 249 G~~l~~d~~~i~eiv~~v~~~~~iPV~vKiR~~~d~~~~~e~a~~le~~G~------d~I~VhgRt~~~~g~~~g-~~~~ 321 (487)
|+....+.+++.+ +. .++.||.+|--..-+.++....++.+.+.|. +-|++.=|+.. . .|.. ..|+
T Consensus 114 gA~~~~n~~LLr~----~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~-y-~~~~~~vdl 186 (288)
T 3tml_A 114 PAFLCRQTDFIHA----CA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVS-F-GYNNLVSDM 186 (288)
T ss_dssp CGGGTTCHHHHHH----HH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEE-C-SSSCEECCH
T ss_pred CcccccCHHHHHH----HH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCC-C-CCCcCcCCH
Confidence 4445567776554 33 4689999997544466788888999988887 66666445432 1 1332 1478
Q ss_pred HHHHHHHhhCCCcEEEc---------------CCCCCHH--HHHHHHHhcCCcEEEecccc
Q psy7343 322 EHITAVRKALTIPVIAN---------------GNIQCLA--DVEACLAQTGVAGVMTAEGN 365 (487)
Q Consensus 322 ~~i~~i~~~~~iPVi~n---------------GgI~s~~--da~~~l~~~Gad~VmiGRa~ 365 (487)
..+..+++ .+.||++. ||-+..- -+.... ..||||++|=+-+
T Consensus 187 ~~i~~lk~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAv-A~GadGl~iE~H~ 245 (288)
T 3tml_A 187 RSLAIMRE-TNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAV-ATGVAGLFMETHP 245 (288)
T ss_dssp HHHHHGGG-GSSCEEEEHHHHTCCCC--------CTTHHHHHHHHHH-HHCCSEEEEEEES
T ss_pred HHHHHHHh-cCCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHH-HcCCCEEEEeecc
Confidence 88888888 89999983 3433332 233445 5799999987643
Done!