Your job contains 1 sequence.
>psy7343
MLVVVDFISSVLCYLSLHWVFGLVTSMELHRHSPVAHPPNPIPQECHSPAARCKGTNVVP
KDCHSSTARSDAWTQLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADK
KLRQEILMSTPEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPM
VSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQ
MVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQ
LLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVM
TAEGNLYNPALFTGQTRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDV
RLLVGKTNHIKDLRKAVDMLRERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVR
PTPEQQE
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7343
(487 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031238 - symbol:CG3645 species:7227 "Drosophila m... 1013 3.3e-102 1
UNIPROTKB|E1BWI8 - symbol:DUS1L "Uncharacterized protein"... 937 3.8e-94 1
UNIPROTKB|E1C6D2 - symbol:DUS1L "Uncharacterized protein"... 937 3.8e-94 1
UNIPROTKB|J9NYR0 - symbol:DUS1L "Uncharacterized protein"... 936 4.8e-94 1
UNIPROTKB|E2R9L8 - symbol:DUS1L "Uncharacterized protein"... 936 4.8e-94 1
UNIPROTKB|Q6P1R4 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 936 4.8e-94 1
UNIPROTKB|G3N340 - symbol:DUS1L "Uncharacterized protein"... 935 6.1e-94 1
MGI|MGI:1915980 - symbol:Dus1l "dihydrouridine synthase 1... 935 6.1e-94 1
ZFIN|ZDB-GENE-030131-1435 - symbol:dus1l "dihydrouridine ... 930 2.1e-93 1
RGD|708389 - symbol:Pp3111 "PP3111 protein" species:10116... 925 7.0e-93 1
UNIPROTKB|J3QLE4 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 893 1.7e-89 1
UNIPROTKB|J3QQZ0 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 731 2.5e-72 1
UNIPROTKB|E1BH75 - symbol:DUS1L "Uncharacterized protein"... 728 5.3e-72 1
TAIR|locus:2155528 - symbol:AT5G67220 species:3702 "Arabi... 666 3.3e-69 2
WB|WBGene00009452 - symbol:F36A2.2 species:6239 "Caenorha... 701 3.8e-69 1
POMBASE|SPBC36B7.04 - symbol:SPBC36B7.04 "tRNA dihydrouri... 688 9.2e-68 1
DICTYBASE|DDB_G0278803 - symbol:dus1l "tRNA-dihydrouridin... 673 3.6e-66 1
SGD|S000004545 - symbol:DUS1 "Dihydrouridine synthase" sp... 636 6.1e-66 2
UNIPROTKB|G4MUR1 - symbol:MGG_08825 "tRNA-dihydrouridine ... 433 1.8e-60 4
CGD|CAL0004455 - symbol:orf19.1404 species:5476 "Candida ... 618 2.4e-60 1
ASPGD|ASPL0000054271 - symbol:AN0956 species:162425 "Emer... 457 9.6e-60 3
UNIPROTKB|J3QKP9 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 566 7.8e-55 1
UNIPROTKB|H0YGW8 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 553 1.9e-53 1
ZFIN|ZDB-GENE-040801-233 - symbol:dus4l "dihydrouridine s... 466 3.1e-44 1
UNIPROTKB|E2RRJ8 - symbol:DUS4L "Uncharacterized protein"... 445 5.2e-42 1
UNIPROTKB|F1NHN2 - symbol:DUS4L "tRNA-dihydrouridine synt... 440 1.7e-41 1
RGD|1311445 - symbol:Dus4l "dihydrouridine synthase 4-lik... 432 1.2e-40 1
UNIPROTKB|D4A0T1 - symbol:Dus4l "Protein Dus4l" species:1... 432 1.2e-40 1
UNIPROTKB|O95620 - symbol:DUS4L "tRNA-dihydrouridine(20a/... 431 1.6e-40 1
MGI|MGI:1919166 - symbol:Dus4l "dihydrouridine synthase 4... 429 2.6e-40 1
DICTYBASE|DDB_G0291360 - symbol:dus4l "tRNA-dihydrouridin... 421 1.8e-39 1
CGD|CAL0003746 - symbol:orf19.966 species:5476 "Candida a... 413 1.3e-38 1
UNIPROTKB|J3QQL9 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 411 2.1e-38 1
UNIPROTKB|A6QPA8 - symbol:DUS4L "DUS4L protein" species:9... 386 9.2e-36 1
UNIPROTKB|I3LP14 - symbol:DUS4L "Uncharacterized protein"... 384 1.5e-35 1
FB|FBgn0032750 - symbol:CG10495 species:7227 "Drosophila ... 384 1.5e-35 1
SGD|S000004397 - symbol:DUS4 "Dihydrouridine synthase" sp... 383 1.9e-35 1
TIGR_CMR|GSU_1005 - symbol:GSU_1005 "dihydrouridine synth... 369 5.8e-34 1
WB|WBGene00016674 - symbol:C45G9.2 species:6239 "Caenorha... 363 2.5e-33 1
POMBASE|SPCC777.15 - symbol:SPCC777.15 "tRNA dihydrouridi... 362 3.2e-33 1
TAIR|locus:2114713 - symbol:AT3G49640 species:3702 "Arabi... 337 1.4e-30 1
UNIPROTKB|Q9NX74 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 334 1.2e-28 1
MGI|MGI:1913619 - symbol:Dus2l "dihydrouridine synthase 2... 332 2.2e-28 1
UNIPROTKB|Q607L4 - symbol:MCA1745 "tRNA-dihydrouridine sy... 318 2.4e-28 1
UNIPROTKB|Q0VC60 - symbol:DUS2L "Uncharacterized protein"... 328 7.8e-28 1
UNIPROTKB|I3LES5 - symbol:DUS2L "Uncharacterized protein"... 327 1.0e-27 1
RGD|1305612 - symbol:Dus2l "dihydrouridine synthase 2-lik... 327 1.0e-27 1
UNIPROTKB|E2RKU2 - symbol:DUS2L "Uncharacterized protein"... 323 3.5e-27 1
UNIPROTKB|Q81VW4 - symbol:BA_0075 "tRNA-dihydrouridine sy... 299 3.7e-26 1
TIGR_CMR|APH_0575 - symbol:APH_0575 "putative tRNA-dihydr... 299 3.7e-26 1
TIGR_CMR|BA_0075 - symbol:BA_0075 "TIM-barrel protein, pu... 299 3.7e-26 1
TIGR_CMR|NSE_0373 - symbol:NSE_0373 "putative tRNA-dihydr... 296 8.1e-26 1
UNIPROTKB|Q87VS1 - symbol:dusB "tRNA-dihydrouridine synth... 295 1.1e-25 1
UNIPROTKB|Q3A9L8 - symbol:CHY_2369 "tRNA-dihydrouridine s... 291 3.0e-25 1
TIGR_CMR|CHY_2369 - symbol:CHY_2369 "putative TIM-barrel ... 291 3.0e-25 1
TIGR_CMR|SPO_2089 - symbol:SPO_2089 "tRNA-dihydrouridine ... 284 1.8e-24 1
TIGR_CMR|ECH_0758 - symbol:ECH_0758 "putative tRNA-dihydr... 280 5.0e-24 1
ZFIN|ZDB-GENE-100922-233 - symbol:dus2l "dihydrouridine s... 293 1.9e-23 1
UNIPROTKB|E1C4F6 - symbol:DUS2L "Uncharacterized protein"... 288 6.6e-23 1
UNIPROTKB|Q8EFG7 - symbol:dusC "tRNA-dihydrouridine synth... 268 1.1e-22 1
TIGR_CMR|SO_2006 - symbol:SO_2006 "NifR3/Smm1 family prot... 268 1.1e-22 1
UNIPROTKB|Q8EJR8 - symbol:dusB "tRNA-dihydrouridine synth... 265 2.3e-22 1
TIGR_CMR|SO_0394 - symbol:SO_0394 "conserved hypothetical... 265 2.3e-22 1
FB|FBgn0030554 - symbol:CG1434 species:7227 "Drosophila m... 281 3.6e-22 1
DICTYBASE|DDB_G0283877 - symbol:dus2l "tRNA-dihydrouridin... 253 1.4e-21 2
WB|WBGene00013201 - symbol:Y54E5A.6 species:6239 "Caenorh... 273 2.0e-21 1
UNIPROTKB|P0ABT5 - symbol:dusB "tRNA-dihydrouridine synth... 249 1.4e-20 1
UNIPROTKB|Q9KV66 - symbol:dusB "tRNA-dihydrouridine synth... 249 1.4e-20 1
TIGR_CMR|VC_0291 - symbol:VC_0291 "NifR3/Smm1 family prot... 249 1.4e-20 1
UNIPROTKB|E1BGZ1 - symbol:DUS3L "Uncharacterized protein"... 268 3.1e-20 1
UNIPROTKB|F1SBU5 - symbol:LOC100513458 "Uncharacterized p... 265 6.8e-20 1
UNIPROTKB|Q487W0 - symbol:CPS_0906 "tRNA-dihydrouridine s... 242 7.9e-20 1
TIGR_CMR|CPS_0906 - symbol:CPS_0906 "NifR3/Smm1 family pr... 242 7.9e-20 1
RGD|1563228 - symbol:Dus3l "dihydrouridine synthase 3-lik... 263 1.1e-19 1
UNIPROTKB|E7EUN9 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 219 1.2e-19 2
TIGR_CMR|CJE_0118 - symbol:CJE_0118 "tRNA-dihydrouridine ... 240 1.3e-19 1
UNIPROTKB|Q96G46 - symbol:DUS3L "tRNA-dihydrouridine(47) ... 256 1.3e-19 2
UNIPROTKB|F1PS34 - symbol:LOC100856098 "Uncharacterized p... 262 1.4e-19 1
UNIPROTKB|Q9KT00 - symbol:dusC "tRNA-dihydrouridine synth... 239 1.7e-19 1
TIGR_CMR|VC_1105 - symbol:VC_1105 "conserved hypothetical... 239 1.7e-19 1
UNIPROTKB|J3QLD5 - symbol:DUS2L "tRNA-dihydrouridine(20) ... 236 3.6e-19 1
UNIPROTKB|P33371 - symbol:dusC "tRNA-dihydrouridine synth... 234 6.0e-19 1
MGI|MGI:2147092 - symbol:Dus3l "dihydrouridine synthase 3... 256 6.6e-19 1
UNIPROTKB|Q489F6 - symbol:CPS_0550 "tRNA-dihydrouridine s... 240 1.6e-18 1
TIGR_CMR|CPS_0550 - symbol:CPS_0550 "NifR3/Smm1 family pr... 240 1.6e-18 1
UNIPROTKB|F1NGP4 - symbol:DUS3L "Uncharacterized protein"... 243 3.8e-18 2
ZFIN|ZDB-GENE-040426-1260 - symbol:dus3l "dihydrouridine ... 249 4.4e-18 1
UNIPROTKB|O53835 - symbol:dus "Probable tRNA-dihydrouridi... 239 1.1e-17 1
UNIPROTKB|Q83D40 - symbol:CBU_0904 "tRNA-dihydrouridine s... 235 1.6e-17 1
TIGR_CMR|CBU_0904 - symbol:CBU_0904 "TIM-barrel protein, ... 235 1.6e-17 1
TIGR_CMR|SPO_2374 - symbol:SPO_2374 "tRNA-dihydrouridine ... 233 2.2e-17 1
UNIPROTKB|Q9KUX9 - symbol:dusA "tRNA-dihydrouridine synth... 230 2.5e-17 1
TIGR_CMR|VC_0379 - symbol:VC_0379 "TIM-barrel protein, yj... 230 2.5e-17 1
UNIPROTKB|Q607T6 - symbol:MCA1669 "tRNA-dihydrouridine sy... 233 3.4e-17 1
DICTYBASE|DDB_G0292686 - symbol:dus3l "tRNA-dihydrouridin... 240 4.5e-17 1
UNIPROTKB|F8WEL2 - symbol:DUS4L "tRNA-dihydrouridine(20a/... 214 9.1e-17 1
CGD|CAL0003882 - symbol:SMM1 species:5476 "Candida albica... 188 2.2e-16 2
UNIPROTKB|Q884C6 - symbol:dusC "tRNA-dihydrouridine synth... 221 2.7e-16 1
UNIPROTKB|Q0C5H0 - symbol:dusA "tRNA-dihydrouridine synth... 220 5.9e-16 1
UNIPROTKB|P32695 - symbol:dusA "tRNA-dihydrouridine synth... 214 3.6e-15 1
WARNING: Descriptions of 25 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0031238 [details] [associations]
symbol:CG3645 species:7227 "Drosophila melanogaster"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:AE014134 Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042
KO:K05542 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:AY051946 EMBL:BT124833
RefSeq:NP_608507.1 RefSeq:NP_722619.1 UniGene:Dm.4432 SMR:Q9VPM1
IntAct:Q9VPM1 MINT:MINT-325917 STRING:Q9VPM1
EnsemblMetazoa:FBtr0078140 EnsemblMetazoa:FBtr0078141 GeneID:33190
KEGG:dme:Dmel_CG3645 UCSC:CG3645-RA FlyBase:FBgn0031238
InParanoid:Q9VPM1 OrthoDB:EOG41VHJ8 GenomeRNAi:33190 NextBio:782335
Uniprot:Q9VPM1
Length = 505
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 176/339 (51%), Positives = 246/339 (72%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRP 205
LGSPR+++APMVD SEL WR+L RRYG+ LCY+PM A+ F D K R++ L + PEDRP
Sbjct: 25 LGSPRYVVAPMVDQSELAWRMLCRRYGAELCYSPMYHANLFATDPKYRKDALQTCPEDRP 84
Query: 206 LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSS 265
LIIQFCGND++ + +AA LA+ HCD +DIN+GCPQ +AKRGHYG++LQD+W LLT +VS+
Sbjct: 85 LIIQFCGNDAQQILDAALLAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEIVST 144
Query: 266 LRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHIT 325
L + VPV+CKIRI++D+ KT+ YA+MLE AGCQLL VHGRT +Q+G TG+A+W +I
Sbjct: 145 LHAKLAVPVTCKIRIFEDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIK 204
Query: 326 AVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASE 385
VR+ + IP++ANGNI L DV CL +TGV GVM+AEGNL+NPA+F G + P W++A E
Sbjct: 205 NVRQHIKIPMLANGNILALDDVHRCLTETGVDGVMSAEGNLHNPAIFKGVSPPVWQMAHE 264
Query: 386 YLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRERFI 445
YL+LV +P + RGH+F + HH++ + +NS++R + N + + V +R ++
Sbjct: 265 YLELVQLHPCPSSFIRGHLFKLFHHIMNIRQNSELRQYLATANQLVQFQAVVQQVRAKYE 324
Query: 446 DYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPE 484
+H+G + P S +L L PW+CQPY+R +PE
Sbjct: 325 PFHKGEVPYEPEQMAAGSEE-DLPLSPWLCQPYIRASPE 362
Score = 222 (83.2 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 74 TQLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPED 133
+ LGSPR+++APMVD SEL WR+L RRYG+ LCY+PM A+ F D K R++ L + PED
Sbjct: 23 SSLGSPRYVVAPMVDQSELAWRMLCRRYGAELCYSPMYHANLFATDPKYRKDALQTCPED 82
Query: 134 RPLIIQ 139
RPLIIQ
Sbjct: 83 RPLIIQ 88
>UNIPROTKB|E1BWI8 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AADN02029975
IPI:IPI00820914 ProteinModelPortal:E1BWI8
Ensembl:ENSGALT00000038896 NextBio:20820685 Uniprot:E1BWI8
Length = 486
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 177/345 (51%), Positives = 240/345 (69%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILM--STPED 203
L +++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L + PED
Sbjct: 14 LRGAHYVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFLRDANYRRENLYGEACPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VP++CKIR++ +++KTV+YA+MLE+AGCQLL VHGRT +Q+G G+ASWEH
Sbjct: 134 LLANEKLSVPITCKIRVFPEIDKTVKYAQMLEKAGCQLLTVHGRTKEQKGPLAGVASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA++IPV ANGNIQCL+DVE C+ +TGV GVM+AEGNL+NPALF G+ WE+A
Sbjct: 194 IQAVRKAVSIPVFANGNIQCLSDVEECIRKTGVHGVMSAEGNLHNPALFEGRNPLVWEMA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKT-NHIKDLRKAVDM-LR 441
EYL++V +YP L Y R H+F + HH L + + L KT I D+ + + + +
Sbjct: 254 EEYLEIVQKYPCPLSYVRAHLFKLWHHTLQVYQQLREELAKVKTLEGIVDVNRELKLRCQ 313
Query: 442 ERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQQ 486
E + EG K P P H WICQPY+RP P+++
Sbjct: 314 EEIANQKEGEK--PKEGLPF---FH------WICQPYIRPGPKER 347
Score = 193 (73.0 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 40/75 (53%), Positives = 52/75 (69%)
Query: 69 RSDA-WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEI 126
R +A W + L +++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E
Sbjct: 5 RGEAFWRETLRGAHYVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFLRDANYRREN 64
Query: 127 LM--STPEDRPLIIQ 139
L + PEDRPLI+Q
Sbjct: 65 LYGEACPEDRPLIVQ 79
>UNIPROTKB|E1C6D2 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:AADN02029975 IPI:IPI00599742
ProteinModelPortal:E1C6D2 Ensembl:ENSGALT00000004402 Uniprot:E1C6D2
Length = 478
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 177/345 (51%), Positives = 240/345 (69%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILM--STPED 203
L +++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L + PED
Sbjct: 14 LRGAHYVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFLRDANYRRENLYGEACPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VP++CKIR++ +++KTV+YA+MLE+AGCQLL VHGRT +Q+G G+ASWEH
Sbjct: 134 LLANEKLSVPITCKIRVFPEIDKTVKYAQMLEKAGCQLLTVHGRTKEQKGPLAGVASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA++IPV ANGNIQCL+DVE C+ +TGV GVM+AEGNL+NPALF G+ WE+A
Sbjct: 194 IQAVRKAVSIPVFANGNIQCLSDVEECIRKTGVHGVMSAEGNLHNPALFEGRNPLVWEMA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKT-NHIKDLRKAVDM-LR 441
EYL++V +YP L Y R H+F + HH L + + L KT I D+ + + + +
Sbjct: 254 EEYLEIVQKYPCPLSYVRAHLFKLWHHTLQVYQQLREELAKVKTLEGIVDVNRELKLRCQ 313
Query: 442 ERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQQ 486
E + EG K P P H WICQPY+RP P+++
Sbjct: 314 EEIANQKEGEK--PKEGLPF---FH------WICQPYIRPGPKER 347
Score = 193 (73.0 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 40/75 (53%), Positives = 52/75 (69%)
Query: 69 RSDA-WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEI 126
R +A W + L +++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E
Sbjct: 5 RGEAFWRETLRGAHYVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFLRDANYRREN 64
Query: 127 LM--STPEDRPLIIQ 139
L + PEDRPLI+Q
Sbjct: 65 LYGEACPEDRPLIVQ 79
>UNIPROTKB|J9NYR0 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AAEX03006160
EMBL:AAEX03006161 Ensembl:ENSCAFT00000045880 Uniprot:J9NYR0
Length = 584
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 186/349 (53%), Positives = 237/349 (67%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
LG R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L PED
Sbjct: 14 LGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VPV+CKIR++ +++KTV+YA+MLE+AGCQLL VHGRT +Q+G +G ASWEH
Sbjct: 134 LLAHEKLSVPVTCKIRVFPEIDKTVKYAQMLEKAGCQLLTVHGRTKEQKGPLSGTASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA+ IPV ANGNIQCL DVE C+ TGV GVM+AEGNL+NPALF G++ WELA
Sbjct: 194 IKAVRKAVAIPVFANGNIQCLRDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAVWELA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTL-----PENSDVRLLVGKT--NHIKDLRKA 436
EYLD+V Q+P L Y R H+F + HH L + E + V+ L G T N LR
Sbjct: 254 EEYLDIVRQHPCPLSYVRAHLFKLWHHTLQVHQELREELAKVKTLEGVTAVNQELKLRCQ 313
Query: 437 VDMLRERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQ 485
D+ R++ EG K P P H WICQPY RP P +
Sbjct: 314 EDISRQK-----EGEK--PSGGLPF---FH------WICQPYFRPGPRE 346
Score = 200 (75.5 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 40/70 (57%), Positives = 50/70 (71%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ LG R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
Score = 39 (18.8 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 297 AGCQLLAVHGRTVDQRGMNT 316
AGC LL V GR Q G T
Sbjct: 523 AGCVLLQVLGR--GQEGTET 540
>UNIPROTKB|E2R9L8 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 CTD:64118 KO:K05542 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AAEX03006160
EMBL:AAEX03006161 RefSeq:XP_848227.1 ProteinModelPortal:E2R9L8
Ensembl:ENSCAFT00000009615 GeneID:475927 KEGG:cfa:475927
NextBio:20851671 Uniprot:E2R9L8
Length = 475
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 186/349 (53%), Positives = 237/349 (67%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
LG R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L PED
Sbjct: 14 LGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VPV+CKIR++ +++KTV+YA+MLE+AGCQLL VHGRT +Q+G +G ASWEH
Sbjct: 134 LLAHEKLSVPVTCKIRVFPEIDKTVKYAQMLEKAGCQLLTVHGRTKEQKGPLSGTASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA+ IPV ANGNIQCL DVE C+ TGV GVM+AEGNL+NPALF G++ WELA
Sbjct: 194 IKAVRKAVAIPVFANGNIQCLRDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAVWELA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTL-----PENSDVRLLVGKT--NHIKDLRKA 436
EYLD+V Q+P L Y R H+F + HH L + E + V+ L G T N LR
Sbjct: 254 EEYLDIVRQHPCPLSYVRAHLFKLWHHTLQVHQELREELAKVKTLEGVTAVNQELKLRCQ 313
Query: 437 VDMLRERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQ 485
D+ R++ EG K P P H WICQPY RP P +
Sbjct: 314 EDISRQK-----EGEK--PSGGLPF---FH------WICQPYFRPGPRE 346
Score = 200 (75.5 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 40/70 (57%), Positives = 50/70 (71%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ LG R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
>UNIPROTKB|Q6P1R4 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC135056 EMBL:BC017081
EMBL:BC062566 EMBL:BC064918 IPI:IPI00335251 RefSeq:NP_071439.3
UniGene:Hs.514599 UniGene:Hs.741994 ProteinModelPortal:Q6P1R4
SMR:Q6P1R4 STRING:Q6P1R4 DMDM:74749069 PaxDb:Q6P1R4 PRIDE:Q6P1R4
DNASU:64118 Ensembl:ENST00000306796 Ensembl:ENST00000354321
GeneID:64118 KEGG:hsa:64118 UCSC:uc002kdq.3 CTD:64118
GeneCards:GC17M080015 H-InvDB:HIX0039074 HGNC:HGNC:30086
HPA:HPA023384 neXtProt:NX_Q6P1R4 PharmGKB:PA142671936
eggNOG:COG0042 HOGENOM:HOG000203649 HOVERGEN:HBG061241
InParanoid:Q6P1R4 KO:K05542 OMA:WEMAEEY OrthoDB:EOG4SN1NJ
GenomeRNAi:64118 NextBio:65992 ArrayExpress:Q6P1R4 Bgee:Q6P1R4
CleanEx:HS_DUS1L Genevestigator:Q6P1R4 GermOnline:ENSG00000169718
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 Uniprot:Q6P1R4
Length = 473
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 182/345 (52%), Positives = 235/345 (68%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L PED
Sbjct: 14 LRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VPV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G +G ASWEH
Sbjct: 134 LLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA+ IPV ANGNIQCL DVE CL TGV GVM+AEGNL+NPALF G++ WELA
Sbjct: 194 IKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSPAVWELA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRER 443
EYLD+V ++P L Y R H+F + HH TL + ++R + K ++ + L+ R
Sbjct: 254 EEYLDIVREHPCPLSYVRAHLFKLWHH--TLQVHQELREELAKVKTLEGIAAVSQELKLR 311
Query: 444 F---IDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQ 485
I EG K P + P H WICQPY+RP P +
Sbjct: 312 CQEEISRQEGAK--PTGDLPF----H------WICQPYIRPGPRE 344
Score = 192 (72.6 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
>UNIPROTKB|G3N340 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:DAAA02049400 EMBL:DAAA02049401
Ensembl:ENSBTAT00000063588 Uniprot:G3N340
Length = 475
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 180/342 (52%), Positives = 234/342 (68%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
LG R ++APMVD SEL WRLLSRR+G+HLCYTPM+ A F+ D R+E L PED
Sbjct: 14 LGGARHVVAPMVDQSELAWRLLSRRHGAHLCYTPMLHAQVFVRDANYRKENLYCDVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMR 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ V PV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G +G ASWEH
Sbjct: 134 TWGHMVVGCPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGTASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA+TIPV ANGNIQCL DVE C+ TGV GVM+AEGNL+NPALF G++ WELA
Sbjct: 194 IKAVRKAVTIPVFANGNIQCLRDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAVWELA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRER 443
EYLD+V Q+P L Y R H+F + HH TL + +R + K ++ + L+ R
Sbjct: 254 EEYLDIVRQHPCPLSYVRAHLFKLWHH--TLQVHQQLREELAKVKTLEGIAAVSQELKLR 311
Query: 444 FIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQ 485
+ +K P+ + H WICQPY RP P++
Sbjct: 312 CQEDISRQKEGEKPSGGLPFFH-------WICQPYFRPGPKE 346
Score = 208 (78.3 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ LG R ++APMVD SEL WRLLSRR+G+HLCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLGGARHVVAPMVDQSELAWRLLSRRHGAHLCYTPMLHAQVFVRDANYRKENLYCDV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
>MGI|MGI:1915980 [details] [associations]
symbol:Dus1l "dihydrouridine synthase 1-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
MGI:MGI:1915980 Gene3D:3.20.20.70 GO:GO:0050660 CTD:64118
eggNOG:COG0042 HOVERGEN:HBG061241 KO:K05542 OrthoDB:EOG4SN1NJ
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 EMBL:AK004041
EMBL:AK088243 EMBL:BC019480 IPI:IPI00224714 RefSeq:NP_081100.2
UniGene:Mm.180622 ProteinModelPortal:Q8C2P3 SMR:Q8C2P3
STRING:Q8C2P3 PRIDE:Q8C2P3 Ensembl:ENSMUST00000167023 GeneID:68730
KEGG:mmu:68730 UCSC:uc007mur.1 GeneTree:ENSGT00550000075089
InParanoid:Q8C2P3 NextBio:327790 Bgee:Q8C2P3 CleanEx:MM_DUS1L
Genevestigator:Q8C2P3 GermOnline:ENSMUSG00000025155 Uniprot:Q8C2P3
Length = 475
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 181/344 (52%), Positives = 234/344 (68%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
LG R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L PED
Sbjct: 14 LGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VPV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G G ASWEH
Sbjct: 134 LLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA+ IPV ANGNIQCL DVE C+ TGV GVM+AEGNL+NPALF G++ WELA
Sbjct: 194 IKAVRKAVGIPVFANGNIQCLQDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAVWELA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKT-NHIKDLRKAVDM-LR 441
EYLD+V Q+P L Y R H+F + HH L + + L KT + + +A+ + +
Sbjct: 254 EEYLDIVRQHPCPLSYVRAHLFKLWHHTLQVHQQLREELAKVKTLEGVAAVSQALKLRCQ 313
Query: 442 ERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQ 485
E EG + P N P H WICQPY+RP P +
Sbjct: 314 EDMSRQQEGVR--PADNLPA---FH------WICQPYIRPGPRE 346
Score = 200 (75.5 bits), Expect = 6.2e-13, P = 6.2e-13
Identities = 40/70 (57%), Positives = 50/70 (71%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ LG R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
>ZFIN|ZDB-GENE-030131-1435 [details] [associations]
symbol:dus1l "dihydrouridine synthase 1-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
ZFIN:ZDB-GENE-030131-1435 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:BX897685 IPI:IPI00481340
ProteinModelPortal:F1QQD1 Ensembl:ENSDART00000127028
ArrayExpress:F1QQD1 Bgee:F1QQD1 Uniprot:F1QQD1
Length = 511
Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
Identities = 176/343 (51%), Positives = 236/343 (68%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS--TPED 203
L RF++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L S ED
Sbjct: 46 LKGARFVVAPMVDQSELAWRLLSRRHGAELCYTPMLHAQVFVRDANYRRENLYSEVNQED 105
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYG +LQD+W LL ++
Sbjct: 106 RPLITQFCANDPEVFIQAALLAQDYCDAIDLNLGCPQMIAKRGHYGVFLQDEWDLLEKMI 165
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VP++CKIR++ ++ KTV+YA+MLE+AGCQLL VHGRT DQ+G TG+ASW+H
Sbjct: 166 KLANEKLSVPITCKIRVFPEIEKTVKYAKMLEKAGCQLLTVHGRTKDQKGALTGIASWKH 225
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVR+A+ IPV ANGNIQ L+DV C+ +TGV GVM+AEGNL+NPALF G++ P WE+A
Sbjct: 226 IKAVREAVNIPVFANGNIQHLSDVHHCMEETGVQGVMSAEGNLHNPALFEGRSPPVWEMA 285
Query: 384 SEYLDLVAQY-PVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRE 442
EYLD+V ++ P L + R H+F + HH TL + D+R + K ++ + + L++
Sbjct: 286 EEYLDIVEKHSPCSLSFVRAHIFKLWHH--TLQIHQDLREDLAKAKNVDGIVEVNRQLKQ 343
Query: 443 RFID-YHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPE 484
R + + W N L P WICQPYVRP P+
Sbjct: 344 RCQEEMAKDESEW---------NQTGLPFPHWICQPYVRPPPK 377
Score = 191 (72.3 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 40/70 (57%), Positives = 48/70 (68%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS-- 129
W + L RF++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L S
Sbjct: 42 WRRTLKGARFVVAPMVDQSELAWRLLSRRHGAELCYTPMLHAQVFVRDANYRRENLYSEV 101
Query: 130 TPEDRPLIIQ 139
EDRPLI Q
Sbjct: 102 NQEDRPLITQ 111
>RGD|708389 [details] [associations]
symbol:Pp3111 "PP3111 protein" species:10116 "Rattus norvegicus"
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 RGD:708389 Gene3D:3.20.20.70
GO:GO:0050660 HOVERGEN:HBG061241 KO:K05542 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:AF508021 EMBL:AY327509
EMBL:AY327510 IPI:IPI00203718 RefSeq:NP_742015.1 UniGene:Rn.179335
ProteinModelPortal:Q8K582 PRIDE:Q8K582 GeneID:246185
KEGG:rno:246185 CTD:246185 NextBio:623466 Genevestigator:Q8K582
Uniprot:Q8K582
Length = 438
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 179/344 (52%), Positives = 234/344 (68%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
LG R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L PED
Sbjct: 14 LGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRG YGA+LQ++W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFLQEEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VPV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G G ASWEH
Sbjct: 134 LLAHERLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA+ IPV ANGNI+CL DVE C+ TGV GVM+AEGNL+NPALF G++ WELA
Sbjct: 194 IKAVRKAVGIPVFANGNIRCLQDVERCIQDTGVQGVMSAEGNLHNPALFEGRSPAVWELA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKT-NHIKDLRKAVDM-LR 441
EYLD+V Q+P L Y R H+F + HH L + + L KT + + +A+ + +
Sbjct: 254 DEYLDIVRQHPCPLSYVRAHLFKLWHHTLQVHQQLREELAKVKTLEGVAAVSQALKLRCQ 313
Query: 442 ERFIDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQ 485
E EG + P N P H WICQPY+RP P++
Sbjct: 314 EDMARQQEGVR--PADNLPA---FH------WICQPYIRPGPKE 346
Score = 202 (76.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 52/113 (46%), Positives = 67/113 (59%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ LG R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRALGGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCDV 69
Query: 131 -PEDRPLIIQRTIF-PRLGSPRFILAP-MVDASEL----PWRLLSR-RYGSHL 175
PEDRPLI+Q P + +LA DA +L P + R RYG+ L
Sbjct: 70 CPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFL 122
>UNIPROTKB|J3QLE4 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000582529 Uniprot:J3QLE4
Length = 309
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 164/290 (56%), Positives = 213/290 (73%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L PED
Sbjct: 14 LRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VPV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G +G ASWEH
Sbjct: 134 LLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA+ IPV ANGNIQCL DVE CL TGV GVM+AEGNL+NPALF G++ WELA
Sbjct: 194 IKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSPAVWELA 253
Query: 384 SEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDL 433
EYLD+V ++P L Y R H+F + HH TL + ++R + K ++ +
Sbjct: 254 EEYLDIVREHPCPLSYVRAHLFKLWHH--TLQVHQELREELAKVKTLEGI 301
Score = 192 (72.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
>UNIPROTKB|J3QQZ0 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000578907 Uniprot:J3QQZ0
Length = 301
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 134/221 (60%), Positives = 168/221 (76%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L PED
Sbjct: 14 LRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL ++
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMI 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VPV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G +G ASWEH
Sbjct: 134 LLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEG 364
I AVRKA+ IPV ANGNIQCL DVE CL TGV GVM+A G
Sbjct: 194 IKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAGG 234
Score = 192 (72.6 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
>UNIPROTKB|E1BH75 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:DAAA02049400 EMBL:DAAA02049401
IPI:IPI00906369 Ensembl:ENSBTAT00000057257 OMA:RMSILAW
Uniprot:E1BH75
Length = 270
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 135/227 (59%), Positives = 170/227 (74%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
LG R ++APMVD SEL WRLLSRR+G+HLCYTPM+ A F+ D R+E L PED
Sbjct: 14 LGGARHVVAPMVDQSELAWRLLSRRHGAHLCYTPMLHAQVFVRDANYRKENLYCDVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+QFC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 74 RPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMS 133
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
PV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G +G ASWEH
Sbjct: 134 ILAWTTSSXPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGTASWEH 193
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370
I AVRKA+TIPV ANGNIQCL DVE C+ TGV GVM+A + +PA
Sbjct: 194 IKAVRKAVTIPVFANGNIQCLRDVERCIQDTGVQGVMSAGEAVPSPA 240
Score = 208 (78.3 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ LG R ++APMVD SEL WRLLSRR+G+HLCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLGGARHVVAPMVDQSELAWRLLSRRHGAHLCYTPMLHAQVFVRDANYRKENLYCDV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
>TAIR|locus:2155528 [details] [associations]
symbol:AT5G67220 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006808
"regulation of nitrogen utilization" evidence=ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:CP002688 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AB020742
HOGENOM:HOG000203649 KO:K05542 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 UniGene:At.66656 UniGene:At.9615 EMBL:AY049299
EMBL:AY102157 IPI:IPI00528780 RefSeq:NP_201523.1
ProteinModelPortal:Q9FH91 SMR:Q9FH91 STRING:Q9FH91 PRIDE:Q9FH91
EnsemblPlants:AT5G67220.1 GeneID:836857 KEGG:ath:AT5G67220
TAIR:At5g67220 InParanoid:Q9FH91 OMA:VERAWAH PhylomeDB:Q9FH91
ProtClustDB:CLSN2686916 Genevestigator:Q9FH91 Uniprot:Q9FH91
Length = 423
Score = 666 (239.5 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 123/241 (51%), Positives = 168/241 (69%)
Query: 145 RLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDR 204
+LG P++I+APMVD SELP+RLL ++YG+ YTPM+ + F +K R + + EDR
Sbjct: 84 KLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAYTPMLHSRIFTETEKYRNQEFTTCKEDR 143
Query: 205 PLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVS 264
PL +QFC ND L EAAK EP+CD +DIN+GCPQ +A+RG+YGA+L D+ PL+ +LV
Sbjct: 144 PLFVQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVE 203
Query: 265 SLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHI 324
L Q + VPVSCKIRI+ ++ T++YA+MLE AGC LLAVHGRT D++ A W I
Sbjct: 204 KLAQNLNVPVSCKIRIFPNLEDTLKYAKMLEDAGCSLLAVHGRTRDEKDGKKFRADWSAI 263
Query: 325 TAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELAS 384
V+ A+ IPV+ANGN++C+ DV+ C+ +TGV GV++AE L NPA F G W +
Sbjct: 264 KEVKNAMRIPVLANGNVRCIEDVDNCIKETGVEGVLSAETLLENPAAFAGFRTAEWAKDN 323
Query: 385 E 385
E
Sbjct: 324 E 324
Score = 179 (68.1 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 37/92 (40%), Positives = 56/92 (60%)
Query: 48 SPAARCKGTNVVPKDCHSSTARSDAWTQLGSPRFILAPMVDASELPWRLLSRRYGSHLCY 107
+PA+ + V+ D A + W +LG P++I+APMVD SELP+RLL ++YG+ Y
Sbjct: 58 APASLGSPSRVLSIDTRVERAWAH-WKKLGRPKYIVAPMVDNSELPFRLLCQKYGAQAAY 116
Query: 108 TPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
TPM+ + F +K R + + EDRPL +Q
Sbjct: 117 TPMLHSRIFTETEKYRNQEFTTCKEDRPLFVQ 148
Score = 54 (24.1 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 381 ELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHI--KDLRKAVD 438
+L EYL L ++PV + R HV M + + VR + N + + L VD
Sbjct: 337 DLVVEYLKLCEKHPVPWRMIRSHVHKMLGEWFRI--HPQVREQLNAQNILTFEFLYGLVD 394
Query: 439 MLRE 442
LRE
Sbjct: 395 QLRE 398
>WB|WBGene00009452 [details] [associations]
symbol:F36A2.2 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:Z81077 PIR:T21830
RefSeq:NP_492379.1 UniGene:Cel.26704 ProteinModelPortal:Q9XVN8
SMR:Q9XVN8 STRING:Q9XVN8 PaxDb:Q9XVN8 EnsemblMetazoa:F36A2.2
GeneID:185334 KEGG:cel:CELE_F36A2.2 UCSC:F36A2.2 CTD:185334
WormBase:F36A2.2 InParanoid:Q9XVN8 OMA:YLFASQP NextBio:927896
Uniprot:Q9XVN8
Length = 527
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 146/342 (42%), Positives = 203/342 (59%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+LAPMVD SEL +R+ +R+YG+ L +TPM+ AH F+ D R+ L DRPL++QFC
Sbjct: 76 VLAPMVDQSELAFRMFTRKYGAQLTFTPMIHAHLFVNDGTYRRNSLALVKADRPLVVQFC 135
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ 271
N A +L E CDG+D+N+GCPQMVAKRG YG++LQD+ L+ +VS++R +
Sbjct: 136 ANKVDTFLAACRLVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDEVDLICEMVSAVRDYCR 195
Query: 272 VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKAL 331
+P+SCKIR+ D +TVEYA+ L AG +L VHGRT D +G TGLA W I V +A+
Sbjct: 196 LPISCKIRVRDDRQQTVEYAKRLVDAGATMLTVHGRTRDMKGAETGLADWSRIRDVVEAV 255
Query: 332 --TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTR--PAWELASEYL 387
+PV+ANGNIQ DVE C+ TG +M+AEG LYNP +F W++A+EYL
Sbjct: 256 GSRVPVMANGNIQFPGDVERCMQATGAVAIMSAEGLLYNPLIFDDANAHVDTWKIAAEYL 315
Query: 388 DLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRERF-ID 446
+ ++ R HVF +CHH +L E D+R+ V + I+D V+ L +R D
Sbjct: 316 EYAKKFNAGTSAIRAHVFRICHH--SLLEYEDLRMRVSLEHRIEDFENIVEELAKRAKSD 373
Query: 447 YHEG-------RKLWPPPNYPMSSNHHNLSLPP-WICQPYVR 480
G R L+ + N +S P WI +PY R
Sbjct: 374 AEAGKNREVEARTLFENIRNGILMNAIEVSKQPHWISKPYFR 415
Score = 154 (59.3 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
+LAPMVD SEL +R+ +R+YG+ L +TPM+ AH F+ D R+ L DRPL++Q
Sbjct: 76 VLAPMVDQSELAFRMFTRKYGAQLTFTPMIHAHLFVNDGTYRRNSLALVKADRPLVVQ 133
>POMBASE|SPBC36B7.04 [details] [associations]
symbol:SPBC36B7.04 "tRNA dihydrouridine synthase Dus1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=ISO]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PomBase:SPBC36B7.04 GO:GO:0005739
GO:GO:0005634 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CU329671
GenomeReviews:CU329671_GR eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 PANTHER:PTHR11082 RefSeq:NP_595986.1
ProteinModelPortal:Q9HGN6 STRING:Q9HGN6 EnsemblFungi:SPBC36B7.04.1
GeneID:2541048 KEGG:spo:SPBC36B7.04 OMA:RCQPYFR OrthoDB:EOG480N5B
NextBio:20802162 Uniprot:Q9HGN6
Length = 399
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 133/327 (40%), Positives = 209/327 (63%)
Query: 140 RTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS 199
R + ++G P+ ILAPMVD SELPWR+L+RR G+ LCY+PM + F + R ++ +
Sbjct: 9 RDFYNKIGRPKRILAPMVDQSELPWRILARRSGADLCYSPMFHSRLFGESEDYRNKVFST 68
Query: 200 T--PEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP 257
PE+RPLIIQFCGND + + +AAK+A P+CD +D+N+GCPQ +AK+G YG++LQ++W
Sbjct: 69 RTIPEERPLIIQFCGNDPEIMLKAAKIAAPYCDAVDVNLGCPQGIAKKGKYGSFLQENWN 128
Query: 258 LLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG 317
L+ ++++ L + +PV+ KIRI+ D KT++YA+M+ +AG +LAVHGR +Q+G TG
Sbjct: 129 LIESIITKLHTELSIPVTAKIRIFPDPQKTLDYAKMILKAGASILAVHGRLREQKGHFTG 188
Query: 318 LASWEHITAVRKALTIPVI--ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQ 375
+A WE I +RK L + ANGNI D++ C+ TGV GV++AEG+LYNP +F
Sbjct: 189 IADWEQIQMLRKNLPSETVLFANGNILHAQDIDRCIKYTGVDGVLSAEGSLYNPRIFLPP 248
Query: 376 TRPAW-------ELASEYLDLVAQYPVRLQYA-----RGHVFNMCHHLLTLPENSDVRLL 423
+ P ++ EYL+++ ++ + Y+ +GH+F + LL++ + +L
Sbjct: 249 SSPLMTLYPRIDDMCEEYLNIIREFKLESDYSSLSAIKGHLFKLMRPLLSIHTDIRSKLA 308
Query: 424 VGKT-NHIKDLRKAVDMLRERFIDYHE 449
G T + V MLR+R ++ E
Sbjct: 309 QGCTPRDFETFPPVVAMLRKRLLECEE 335
Score = 182 (69.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 67/229 (29%), Positives = 110/229 (48%)
Query: 71 DAWTQLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST 130
D + ++G P+ ILAPMVD SELPWR+L+RR G+ LCY+PM + F + R ++ +
Sbjct: 10 DFYNKIGRPKRILAPMVDQSELPWRILARRSGADLCYSPMFHSRLFGESEDYRNKVFSTR 69
Query: 131 --PEDRPLIIQRT-IFPRLG-SPRFILAPMVDASEL----PWRLLSR-RYGSHLCYTPMV 181
PE+RPLIIQ P + I AP DA ++ P + + +YGS L +
Sbjct: 70 TIPEERPLIIQFCGNDPEIMLKAAKIAAPYCDAVDVNLGCPQGIAKKGKYGSFLQENWNL 129
Query: 182 SAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQM 241
I KL E+ S P I+ + K L A + + + ++ G ++
Sbjct: 130 -IESIIT--KLHTEL--SIPVTAK--IRIFPDPQKTLDYAKMILKAGASILAVH-G--RL 179
Query: 242 VAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEY 290
++GH+ DW + L +L + + I QD+++ ++Y
Sbjct: 180 REQKGHFTGIA--DWEQIQMLRKNLPSETVLFANGNILHAQDIDRCIKY 226
Score = 181 (68.8 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 48/163 (29%), Positives = 83/163 (50%)
Query: 335 VIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAW-------ELASEYL 387
+ ANGNI D++ C+ TGV GV++AEG+LYNP +F + P ++ EYL
Sbjct: 208 LFANGNILHAQDIDRCIKYTGVDGVLSAEGSLYNPRIFLPPSSPLMTLYPRIDDMCEEYL 267
Query: 388 DLVAQYPVRLQYA-----RGHVFNMCHHLLTLPENSDVRLLVGKT-NHIKDLRKAVDMLR 441
+++ ++ + Y+ +GH+F + LL++ + +L G T + V MLR
Sbjct: 268 NIIREFKLESDYSSLSAIKGHLFKLMRPLLSIHTDIRSKLAQGCTPRDFETFPPVVAMLR 327
Query: 442 ERFIDYHEGRKLWPPPNYPMSSNHHNLSLP--PWI-CQPYVRP 481
+R ++ E ++ + S ++ P PW QPY+RP
Sbjct: 328 KRLLECEEKGEINEDKDVKESVKD-SMGYPVIPWWRVQPYIRP 369
>DICTYBASE|DDB_G0278803 [details] [associations]
symbol:dus1l "tRNA-dihydrouridine synthase 1-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
dictyBase:DDB_G0278803 GO:GO:0005634 Gene3D:3.20.20.70
GenomeReviews:CM000152_GR GO:GO:0050660 EMBL:AAFI02000024
eggNOG:COG0042 KO:K05542 GO:GO:0017150 PANTHER:PTHR11082
RefSeq:XP_641974.1 ProteinModelPortal:Q54XQ6 STRING:Q54XQ6
EnsemblProtists:DDB0238071 GeneID:8621706 KEGG:ddi:DDB_G0278803
OMA:QIARRGN Uniprot:Q54XQ6
Length = 435
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 127/299 (42%), Positives = 194/299 (64%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRP 205
L SP+ +APMVD + L +R+L R+YG+ + YTPM + F K R++ + PEDRP
Sbjct: 49 LKSPKKTVAPMVDHTFLAFRMLCRKYGADMVYTPMFHSKNFATCKTYRRDYWSTCPEDRP 108
Query: 206 LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSS 265
L++QFCGN+ + + +AAK E HCD ID+N+GCPQ +A+RG+YG++L D ++ +V
Sbjct: 109 LVVQFCGNEPEWVVKAAKYIEDHCDAIDLNLGCPQQIARRGNYGSFLLDKPHIILPIVQE 168
Query: 266 LRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHIT 325
L + ++VP+ CKIR+ +++ T++ A L+ AGCQLL +HGRT +Q+G N+G+A+W+ I
Sbjct: 169 LHKHIKVPIFCKIRLLPNLDDTIKLALQLQEAGCQLLTIHGRTKEQKGHNSGIANWKAIR 228
Query: 326 AVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASE 385
+R+ L+IPVIANG++ D++ CL +TG GVM+AEG L NP+ F+G P +++A E
Sbjct: 229 TIREQLSIPVIANGSVVQYEDIDRCLEETGADGVMSAEGILANPSFFSGLKVPIYQVARE 288
Query: 386 YLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKD-LRKAVDMLRER 443
Y+D Y + R H+F M L + SD+R +G T H D R + L R
Sbjct: 289 YIDFTEIYKTSIHVTRSHIFKMLKEKLDV--YSDLRETMGAT-HTNDGFRDIITDLETR 344
Score = 147 (56.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 61/226 (26%), Positives = 109/226 (48%)
Query: 76 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRP 135
L SP+ +APMVD + L +R+L R+YG+ + YTPM + F K R++ + PEDRP
Sbjct: 49 LKSPKKTVAPMVDHTFLAFRMLCRKYGADMVYTPMFHSKNFATCKTYRRDYWSTCPEDRP 108
Query: 136 LIIQRT-IFPR--LGSPRFILAPMVDASEL----PWRLLSR-RYGSHLCYTPMVSAHQFI 187
L++Q P + + ++I DA +L P ++ R YGS L P + I
Sbjct: 109 LVVQFCGNEPEWVVKAAKYI-EDHCDAIDLNLGCPQQIARRGNYGSFLLDKPHIILP--I 165
Query: 188 ADKKLRQEILMSTPEDRPLI--IQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKR 245
++L + I + P+ I+ N + A +L E C + I+ G + ++
Sbjct: 166 V-QELHKHIKV------PIFCKIRLLPNLDDTIKLALQLQEAGCQLLTIH-G--RTKEQK 215
Query: 246 GHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRI--YQDVNKTVE 289
GH +W + ++R+ + +PV + Y+D+++ +E
Sbjct: 216 GHNSGIA--NW----KAIRTIREQLSIPVIANGSVVQYEDIDRCLE 255
>SGD|S000004545 [details] [associations]
symbol:DUS1 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA;IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 SGD:S000004545
GO:GO:0005634 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:BK006946
EMBL:Z46373 eggNOG:COG0042 HOGENOM:HOG000203649 KO:K05542
GO:GO:0017150 PANTHER:PTHR11082 GeneTree:ENSGT00550000075089
OMA:RCQPYFR OrthoDB:EOG480N5B PIR:S48817 RefSeq:NP_013631.1
ProteinModelPortal:P53759 SMR:P53759 IntAct:P53759
MINT:MINT-4083769 STRING:P53759 PaxDb:P53759 PeptideAtlas:P53759
EnsemblFungi:YML080W GeneID:854895 KEGG:sce:YML080W CYGD:YML080w
BioCyc:MetaCyc:MONOMER-16676 NextBio:977861 Genevestigator:P53759
GermOnline:YML080W Uniprot:P53759
Length = 423
Score = 636 (228.9 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 133/305 (43%), Positives = 188/305 (61%)
Query: 140 RTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQE---I 196
R +F ++G P I+APMVD SEL WR+LSRRYG+ L YTPM+ A F KK R++
Sbjct: 20 RQLFDKIGRPTRIVAPMVDQSELAWRILSRRYGATLAYTPMLHAKLFATSKKYREDNWSS 79
Query: 197 LMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 256
L + DRPL++QFC ND + L AAKL E CD +D+N+GCPQ +AK+GHYG++L ++W
Sbjct: 80 LDGSSVDRPLVVQFCANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIAKKGHYGSFLMEEW 139
Query: 257 PLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT 316
L+ NL+++L + ++VPV+ KIRI+ D K++ YA+M+ AG Q L VHGR +Q+G T
Sbjct: 140 DLIHNLINTLHKNLKVPVTAKIRIFDDCEKSLNYAKMVLDAGAQFLTVHGRVREQKGQKT 199
Query: 317 GLASWEHITAVRKALTIPVI--ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT- 373
GLA+WE I +R L + ANGNI D+ C+ G VM+AEGNLYNP +F
Sbjct: 200 GLANWETIKYLRDNLPKETVFFANGNILYPEDISRCMEHIGADAVMSAEGNLYNPGVFNV 259
Query: 374 GQTR------PAWE-LASEYLDLV--AQYPVRLQYA-RGHVFNMCHHLLTLPENSDVRLL 423
GQT+ P + + EY +V Q + A + H F + L P ++D+R
Sbjct: 260 GQTKNKEKIFPRVDKIIREYFQIVKECQESKASKTAMKSHFFKILRPFL--PHHTDIRST 317
Query: 424 VGKTN 428
+ N
Sbjct: 318 LATMN 322
Score = 170 (64.9 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 35/68 (51%), Positives = 46/68 (67%)
Query: 75 QLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQE---ILMSTP 131
++G P I+APMVD SEL WR+LSRRYG+ L YTPM+ A F KK R++ L +
Sbjct: 25 KIGRPTRIVAPMVDQSELAWRILSRRYGATLAYTPMLHAKLFATSKKYREDNWSSLDGSS 84
Query: 132 EDRPLIIQ 139
DRPL++Q
Sbjct: 85 VDRPLVVQ 92
Score = 53 (23.7 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 469 SLPPWICQPYVRP 481
++P W CQPY RP
Sbjct: 371 TVPYWRCQPYFRP 383
>UNIPROTKB|G4MUR1 [details] [associations]
symbol:MGG_08825 "tRNA-dihydrouridine synthase 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CM001232 KO:K05542
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 RefSeq:XP_003713841.1
ProteinModelPortal:G4MUR1 EnsemblFungi:MGG_08825T0 GeneID:2679811
KEGG:mgr:MGG_08825 Uniprot:G4MUR1
Length = 614
Score = 433 (157.5 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 87/187 (46%), Positives = 116/187 (62%)
Query: 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNL 262
DRPL +QFC ND L EAAK P+CD +D+N+GCPQ +A++GHYGA+LQ+D L+ L
Sbjct: 117 DRPLFVQFCANDPSALLEAAKHVAPYCDAVDLNLGCPQGIARKGHYGAFLQEDQELIHKL 176
Query: 263 VSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWE 322
+ L + +PV+ KIRI T+ YAR + AG +L VHGR +Q+G TG+A W
Sbjct: 177 IRQLHDGLSIPVTAKIRILDTPEATLAYARNVLDAGASILTVHGRRREQKGHLTGVADWS 236
Query: 323 HITAVRKAL---TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPA 379
I +R+ L T+ + ANGNI D+E CL TG VM+AEGNL +P LF + P
Sbjct: 237 AIRHLRENLPPETV-IFANGNILQRGDLERCLEATGADAVMSAEGNLSDPTLFAPEP-PV 294
Query: 380 WELASEY 386
E EY
Sbjct: 295 GEEGREY 301
Score = 115 (45.5 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 134 RPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRY------GSHLCYTPMVSAHQFI 187
+P + R + +GSP+F++APMVD SE WR+L+R + + L YTPM A F
Sbjct: 23 KPKLHGRAFYESIGSPKFVVAPMVDQSEFAWRMLTRSFMPESQRSTVLGYTPMFHARLFG 82
Query: 188 ADKKLRQEILMSTPED 203
+ R + +D
Sbjct: 83 ENPSYRDSHFQAIRKD 98
Score = 106 (42.4 bits), Expect = 1.5e-59, Sum P(4) = 1.5e-59
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 73 WTQLGSPRFILAPMVDASELPWRLLSRRY------GSHLCYTPMVSAHQFIADKKLRQEI 126
+ +GSP+F++APMVD SE WR+L+R + + L YTPM A F + R
Sbjct: 32 YESIGSPKFVVAPMVDQSEFAWRMLTRSFMPESQRSTVLGYTPMFHARLFGENPSYRDSH 91
Query: 127 LMSTPED 133
+ +D
Sbjct: 92 FQAIRKD 98
Score = 60 (26.2 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 401 RGHVFNMCHHLLTLPENSDVRLLVGKTN----HIKDLRKAVDMLRER 443
+ H+F+M H +T +++DVR V ++ HI L + +DM+ +
Sbjct: 416 KAHLFHMLRHFIT--KHTDVRDAVARSRLGEGHINYLERILDMVERK 460
Score = 49 (22.3 bits), Expect = 1.8e-60, Sum P(4) = 1.8e-60
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 471 PPWICQPYVRPTP 483
P W+ QP VRP P
Sbjct: 539 PWWVVQPIVRPLP 551
>CGD|CAL0004455 [details] [associations]
symbol:orf19.1404 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
CGD:CAL0004455 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000101
EMBL:AACQ01000099 eggNOG:COG0042 HOGENOM:HOG000203649 KO:K05542
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 RefSeq:XP_714575.1
RefSeq:XP_714669.1 ProteinModelPortal:Q59YC2 STRING:Q59YC2
GeneID:3643687 GeneID:3643817 KEGG:cal:CaO19.1404
KEGG:cal:CaO19.8982 Uniprot:Q59YC2
Length = 467
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 126/306 (41%), Positives = 189/306 (61%)
Query: 140 RTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS 199
R ++ +G P+ I+APMVD SEL WR+LSRRYG+ LCYTPM A F +K R + +
Sbjct: 49 RQLYNAIGQPKTIVAPMVDQSELAWRILSRRYGAQLCYTPMFHAKLFATQEKYRNSMWTT 108
Query: 200 TPE-----DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
+ DRPL++QFC ND L +AAKL E CD ID+N+GCPQ +A++G YGA+L D
Sbjct: 109 NLDGNKDLDRPLVVQFCANDPDYLLQAAKLIENECDAIDLNLGCPQGIARKGKYGAFLMD 168
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
DW L+ L+ +L + +PV+ KIRIY D K+++YA+M+ AG Q + VHGRT + +G
Sbjct: 169 DWDLVYKLIKNLHDNLSIPVTAKIRIYDDYEKSLKYAKMVLDAGAQFITVHGRTREMKGQ 228
Query: 315 NTGLASWEHITAVRKALTIPVI--ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
TGLA+W+ + +R L + +NGNI +D++ C ++T VM+AEGNLYNP +F
Sbjct: 229 ATGLANWKILKYLRDNLPQDQVFFSNGNILYPSDIQRCQSETACDAVMSAEGNLYNPGVF 288
Query: 373 -------TGQTRPAWELASEYLDLVAQ-YP-VRLQYA-RGHVFNMCHHLLTLPENSDVRL 422
Q ++ EY ++V + Y + ++A + H F + H L + + ++R
Sbjct: 289 WTLDDNKDKQFPRVDKILREYFEIVKENYDSLASRHAMKSHFFKLLHAFLEV--HKELRP 346
Query: 423 LVGKTN 428
++GK N
Sbjct: 347 IIGKAN 352
Score = 173 (66.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 34/72 (47%), Positives = 46/72 (63%)
Query: 73 WTQLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPE 132
+ +G P+ I+APMVD SEL WR+LSRRYG+ LCYTPM A F +K R + + +
Sbjct: 52 YNAIGQPKTIVAPMVDQSELAWRILSRRYGAQLCYTPMFHAKLFATQEKYRNSMWTTNLD 111
Query: 133 -----DRPLIIQ 139
DRPL++Q
Sbjct: 112 GNKDLDRPLVVQ 123
Score = 146 (56.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 47/162 (29%), Positives = 81/162 (50%)
Query: 337 ANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF------TGQTRPAWE-LASEYLDL 389
+NGNI +D++ C ++T VM+AEGNLYNP +F + P + + EY ++
Sbjct: 253 SNGNILYPSDIQRCQSETACDAVMSAEGNLYNPGVFWTLDDNKDKQFPRVDKILREYFEI 312
Query: 390 VAQ-YP-VRLQYA-RGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLR-------KAVDM 439
V + Y + ++A + H F + H L + + ++R ++GK N L K +
Sbjct: 313 VKENYDSLASRHAMKSHFFKLLHAFLEV--HKELRPIIGKANVNGPLDQWESIVVKIESL 370
Query: 440 LRERFIDYHEGRKLWPPPNYPMSS-NHHNLSLPPWICQPYVR 480
++E + + + KL N P+ H ++P W CQPY R
Sbjct: 371 VQEIYSNNPDIEKLDVITNGPIEDWGGHYKTVPYWRCQPYFR 412
>ASPGD|ASPL0000054271 [details] [associations]
symbol:AN0956 species:162425 "Emericella nidulans"
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70 EMBL:BN001308
GO:GO:0050660 EMBL:AACD01000014 eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
OrthoDB:EOG480N5B RefSeq:XP_658560.1 ProteinModelPortal:Q5BES4
STRING:Q5BES4 EnsemblFungi:CADANIAT00001695 GeneID:2876733
KEGG:ani:AN0956.2 OMA:GHNTGLA Uniprot:Q5BES4
Length = 563
Score = 457 (165.9 bits), Expect = 9.6e-60, Sum P(3) = 9.6e-60
Identities = 86/187 (45%), Positives = 122/187 (65%)
Query: 203 DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNL 262
DRPL +QFC ND + AA+ P+CD +D+N+GCPQ +A+RGHYGA+LQ+DW L+ L
Sbjct: 122 DRPLFVQFCANDPDDFFNAARHVAPYCDAVDLNLGCPQGIARRGHYGAFLQEDWDLIYKL 181
Query: 263 VSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWE 322
++ L ++VPV+ K RI + KT+EYA+M+ AG ++ +HGRT +Q+G NTGLA W
Sbjct: 182 INKLHMELEVPVTAKFRIQESKEKTLEYAKMILSAGASIITLHGRTREQKGHNTGLADWS 241
Query: 323 HITAVRKAL---TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPA 379
+I +R L T+ + ANGN D+ CL TG GVM+AEGNL +P++F + P
Sbjct: 242 YIRYLRDNLPPDTV-IFANGNNLNHDDLARCLEATGADGVMSAEGNLSDPSIFA-KPPPV 299
Query: 380 WELASEY 386
EY
Sbjct: 300 GSEGREY 306
Score = 111 (44.1 bits), Expect = 9.6e-60, Sum P(3) = 9.6e-60
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 131 PEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRY------GSHLCYTPMVSAH 184
P R + R + +GSP++I+APMVD SE WR+L+R + S L Y+PM A
Sbjct: 24 PVTRKKLHGRAFYESIGSPKYIVAPMVDRSEFAWRMLTRSFMTPEESKSVLAYSPMYHAR 83
Query: 185 QF 186
F
Sbjct: 84 LF 85
Score = 103 (41.3 bits), Expect = 6.6e-59, Sum P(3) = 6.6e-59
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 73 WTQLGSPRFILAPMVDASELPWRLLSRRY------GSHLCYTPMVSAHQF 116
+ +GSP++I+APMVD SE WR+L+R + S L Y+PM A F
Sbjct: 36 YESIGSPKYIVAPMVDRSEFAWRMLTRSFMTPEESKSVLAYSPMYHARLF 85
Score = 74 (31.1 bits), Expect = 9.6e-60, Sum P(3) = 9.6e-60
Identities = 10/15 (66%), Positives = 14/15 (93%)
Query: 471 PPWICQPYVRPTPEQ 485
P W+CQP++RPTPE+
Sbjct: 492 PFWVCQPHIRPTPEE 506
>UNIPROTKB|J3QKP9 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000578176 Uniprot:J3QKP9
Length = 247
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 121/251 (48%), Positives = 158/251 (62%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRP 205
L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E
Sbjct: 14 LRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKE---------N 64
Query: 206 LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAY-LQDDWP-LLTNLV 263
L + C D + + C D + + + + A L P ++ V
Sbjct: 65 LYCEVCPEDRPLIVQ-------FCAN-DPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRV 116
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ + VPV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G +G ASWEH
Sbjct: 117 LLAHEKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEH 176
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELA 383
I AVRKA+ IPV ANGNIQCL DVE CL TGV GVM+AEGNL+NPALF G++ WELA
Sbjct: 177 IKAVRKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSPAVWELA 236
Query: 384 SEYLDLVAQYP 394
EYLD+V ++P
Sbjct: 237 EEYLDIVREHP 247
Score = 192 (72.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 131 -PEDRPLIIQ 139
PEDRPLI+Q
Sbjct: 70 CPEDRPLIVQ 79
>UNIPROTKB|H0YGW8 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000538833 Uniprot:H0YGW8
Length = 298
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 112/221 (50%), Positives = 146/221 (66%)
Query: 268 QAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAV 327
+ + VPV+CKIR++ +++KTV YA+MLE+AGCQLL VHGRT +Q+G +G ASWEHI AV
Sbjct: 6 EKLSVPVTCKIRVFPEIDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAASWEHIKAV 65
Query: 328 RKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYL 387
RKA+ IPV ANGNIQCL DVE CL TGV GVM+AEGNL+NPALF G++ WELA EYL
Sbjct: 66 RKAVAIPVFANGNIQCLQDVERCLRDTGVQGVMSAEGNLHNPALFEGRSPAVWELAEEYL 125
Query: 388 DLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRERF--- 444
D+V ++P L Y R H+F + HH TL + ++R + K ++ + L+ R
Sbjct: 126 DIVREHPCPLSYVRAHLFKLWHH--TLQVHQELREELAKVKTLEGIAAVSQELKLRCQEE 183
Query: 445 IDYHEGRKLWPPPNYPMSSNHHNLSLPPWICQPYVRPTPEQ 485
I EG K P + P H WICQPY+RP P +
Sbjct: 184 ISRQEGAK--PTGDLPF----H------WICQPYIRPGPRE 212
>ZFIN|ZDB-GENE-040801-233 [details] [associations]
symbol:dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
ZFIN:ZDB-GENE-040801-233 Gene3D:3.20.20.70 GO:GO:0050660
HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
CTD:11062 HOVERGEN:HBG053313 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:BX072538 IPI:IPI00487005
RefSeq:NP_001003490.2 UniGene:Dr.89736 Ensembl:ENSDART00000130623
GeneID:445096 KEGG:dre:445096 InParanoid:Q5RIX6 NextBio:20831860
Uniprot:Q5RIX6
Length = 307
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 103/278 (37%), Positives = 157/278 (56%)
Query: 142 IFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTP 201
+F R P + APMV S+L +R L R+Y +C+TPM+ A F+ K R +
Sbjct: 10 LFSR-EKPVRVCAPMVRYSKLAFRTLVRKYDCDVCFTPMIIAADFMRSAKARDSEFTTNK 68
Query: 202 EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTN 261
DRPLI+QF D++ L +AA + P DG+D+N GCPQ A YGA L + L+ +
Sbjct: 69 NDRPLIVQFAAKDAQTLADAACVVSPFSDGVDLNCGCPQRWAMSEGYGACLINKPELVKD 128
Query: 262 LVSSLRQAVQVP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL 318
+V +R + P VS KIRI++DV +TV+ + +E AG + VHGRT +R
Sbjct: 129 MVRHVRNQIDNPNYAVSIKIRIHKDVRQTVDLCQKVEAAGVSYITVHGRTAIERHQPV-- 186
Query: 319 ASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRP 378
++ I ++ +L+IPVIANG+I+ + DVEA TGV GVM+A G L NPA+F+G
Sbjct: 187 -HYDTIKTIKDSLSIPVIANGDIKSMQDVEAVCELTGVDGVMSARGLLSNPAMFSGFEET 245
Query: 379 AWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPE 416
+ +++D+ A++ H+ +M + + PE
Sbjct: 246 PLQCVWDWVDIAAEHGTPFTCFHHHLIHMLERITSQPE 283
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/108 (33%), Positives = 52/108 (48%)
Query: 79 PRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLII 138
P + APMV S+L +R L R+Y +C+TPM+ A F+ K R + DRPLI+
Sbjct: 16 PVRVCAPMVRYSKLAFRTLVRKYDCDVCFTPMIIAADFMRSAKARDSEFTTNKNDRPLIV 75
Query: 139 QRTI--FPRLGSPRFILAPMVDASEL----PWR-LLSRRYGSHLCYTP 179
Q L +++P D +L P R +S YG+ L P
Sbjct: 76 QFAAKDAQTLADAACVVSPFSDGVDLNCGCPQRWAMSEGYGACLINKP 123
>UNIPROTKB|E2RRJ8 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AAEX03011212 RefSeq:XP_540383.2
Ensembl:ENSCAFT00000006298 GeneID:483264 KEGG:cfa:483264
Uniprot:E2RRJ8
Length = 317
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 99/268 (36%), Positives = 148/268 (55%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+ APMV S+L +R L R+YG LCYTPM+ A F+ K R + D PLI+QF
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYGCDLCYTPMIVAADFVRSIKARDSEFTTNQGDCPLIVQFA 89
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ 271
ND++ L++AA++ P+ +GIDIN GCPQ A YGA L + L+ ++V +R V+
Sbjct: 90 ANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINKPELVRDMVKQVRNQVE 149
Query: 272 VP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
P VS KIRI+ D+ +T++ R E G + VHGRTV++R +E I ++
Sbjct: 150 NPRFSVSIKIRIHDDLTRTIDLCRKAEATGVSWITVHGRTVEERHQPV---HYEAIKIIK 206
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLD 388
+ ++IPVIANG+I+ L + E TG GVM A G L NPA+F G + +++D
Sbjct: 207 ENMSIPVIANGDIRSLKEAENVWHITGTDGVMVARGLLANPAMFAGYNETPLQCIWDWID 266
Query: 389 LVAQYPVRLQYARGHVFNMCHHLLTLPE 416
+ + H+ M + + E
Sbjct: 267 IALELGTPYMCFHQHLMYMMEKITSRQE 294
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
+ APMV S+L +R L R+YG LCYTPM+ A F+ K R + D PLI+Q
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYGCDLCYTPMIVAADFVRSIKARDSEFTTNQGDCPLIVQ 87
>UNIPROTKB|F1NHN2 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine synthase" species:9031
"Gallus gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 OMA:AGPMVRY GeneTree:ENSGT00550000074907
EMBL:AC147596 IPI:IPI00813011 Ensembl:ENSGALT00000039460
Uniprot:F1NHN2
Length = 307
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 102/291 (35%), Positives = 152/291 (52%)
Query: 145 RLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDR 204
R G I APMV S+L +R L RRYG LCYTPMV A F+ K R + D
Sbjct: 11 RAGHVVKICAPMVRYSKLAFRTLVRRYGCDLCYTPMVVAADFVRSAKARDSEFTTNRGDN 70
Query: 205 PLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVS 264
PLI+QF +++ L +AA L P DG+D+N GCPQ A YGA L + L+ ++V
Sbjct: 71 PLIVQFAAKEAQVLCDAALLVCPFADGVDLNCGCPQRWAMAEGYGACLINKPELVRDMVR 130
Query: 265 SLRQAVQVP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASW 321
+R + P VS KIRI++D+ KTV+ + E G + VHGR +++R +
Sbjct: 131 HVRNQIDNPRFSVSIKIRIHEDLKKTVDLCKKAEATGVSWITVHGRNIEERHQPV---HY 187
Query: 322 EHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWE 381
+ I +++++ IPV+ANG+I+ L D E TG GVM A G L NPA+F G +
Sbjct: 188 DAIKVIKESIHIPVVANGDIKTLKDAENVHHLTGADGVMVARGLLANPAMFAGYEETPLK 247
Query: 382 LASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKD 432
+++D+ ++ H+ M + + E +L T+ + D
Sbjct: 248 CIQDWVDIALEHGTPFTCFHHHLMYMMERITSKQEKKVFNIL-SSTSAVLD 297
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 39/105 (37%), Positives = 50/105 (47%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRT 141
I APMV S+L +R L RRYG LCYTPMV A F+ K R + D PLI+Q
Sbjct: 18 ICAPMVRYSKLAFRTLVRRYGCDLCYTPMVVAADFVRSAKARDSEFTTNRGDNPLIVQFA 77
Query: 142 IFPR--LGSPRFILAPMVDASEL----PWR-LLSRRYGSHLCYTP 179
L ++ P D +L P R ++ YG+ L P
Sbjct: 78 AKEAQVLCDAALLVCPFADGVDLNCGCPQRWAMAEGYGACLINKP 122
>RGD|1311445 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 RGD:1311445 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
IPI:IPI00914747 ProteinModelPortal:D4A3L7
Ensembl:ENSRNOT00000011068 UCSC:RGD:1311445 ArrayExpress:D4A3L7
Uniprot:D4A3L7
Length = 324
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 95/268 (35%), Positives = 146/268 (54%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+QF
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQFA 89
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ 271
ND++ L++AA + P+ GIDIN GCPQ A YGA L + L+ ++V +R V+
Sbjct: 90 ANDARLLSDAALIVCPYASGIDINCGCPQRWAMADGYGACLINKPELVLDMVRQVRNRVE 149
Query: 272 VP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
P VS KIRI+ D+ +T++ R +E G + VHGRTV++R ++ I ++
Sbjct: 150 NPRFSVSIKIRIHDDLARTIDLCRKVEATGVSWITVHGRTVEERHQPV---HYDAIKMIK 206
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLD 388
+ ++IP++ANG+I+ L + E TG GVM A G L NPA+F G + +++D
Sbjct: 207 ENVSIPIVANGDIRSLKEAENVWQMTGTDGVMVARGLLANPAMFAGYEETPLKCVWDWVD 266
Query: 389 LVAQYPVRLQYARGHVFNMCHHLLTLPE 416
+ + H+ M + + E
Sbjct: 267 IALELGTPFMCFHQHLMYMMEKITSRQE 294
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+Q
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQ 87
>UNIPROTKB|D4A0T1 [details] [associations]
symbol:Dus4l "Protein Dus4l" species:10116 "Rattus
norvegicus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
RGD:1311445 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CH473947
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 IPI:IPI00951041
RefSeq:NP_001129275.1 UniGene:Rn.41975 Ensembl:ENSRNOT00000068419
GeneID:366593 KEGG:rno:366593 NextBio:689691 Uniprot:D4A0T1
Length = 321
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 95/268 (35%), Positives = 146/268 (54%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+QF
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQFA 89
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ 271
ND++ L++AA + P+ GIDIN GCPQ A YGA L + L+ ++V +R V+
Sbjct: 90 ANDARLLSDAALIVCPYASGIDINCGCPQRWAMADGYGACLINKPELVLDMVRQVRNRVE 149
Query: 272 VP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
P VS KIRI+ D+ +T++ R +E G + VHGRTV++R ++ I ++
Sbjct: 150 NPRFSVSIKIRIHDDLARTIDLCRKVEATGVSWITVHGRTVEERHQPV---HYDAIKMIK 206
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLD 388
+ ++IP++ANG+I+ L + E TG GVM A G L NPA+F G + +++D
Sbjct: 207 ENVSIPIVANGDIRSLKEAENVWQMTGTDGVMVARGLLANPAMFAGYEETPLKCVWDWVD 266
Query: 389 LVAQYPVRLQYARGHVFNMCHHLLTLPE 416
+ + H+ M + + E
Sbjct: 267 IALELGTPFMCFHQHLMYMMEKITSRQE 294
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+Q
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQ 87
>UNIPROTKB|O95620 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CH471070 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:U62767 EMBL:AK297195
EMBL:BC111774 IPI:IPI00021410 IPI:IPI00783809 RefSeq:NP_001257348.1
RefSeq:NP_853559.1 UniGene:Hs.97627 ProteinModelPortal:O95620
SMR:O95620 STRING:O95620 PaxDb:O95620 PRIDE:O95620
Ensembl:ENST00000265720 Ensembl:ENST00000402620 GeneID:11062
KEGG:hsa:11062 UCSC:uc003veh.3 CTD:11062 GeneCards:GC07P107203
HGNC:HGNC:21517 HPA:HPA044301 neXtProt:NX_O95620
PharmGKB:PA142671939 HOVERGEN:HBG053313 InParanoid:O95620 KO:K05545
OMA:AGPMVRY OrthoDB:EOG4ZCT4T PhylomeDB:O95620 GenomeRNAi:11062
NextBio:42037 ArrayExpress:O95620 Bgee:O95620 CleanEx:HS_DUS4L
Genevestigator:O95620 GermOnline:ENSG00000105865 Uniprot:O95620
Length = 317
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 96/268 (35%), Positives = 146/268 (54%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+QF
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTTNQGDCPLIVQFA 89
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ 271
ND++ L++AA++ P+ +GIDIN GCPQ A YGA L + L+ ++V +R V+
Sbjct: 90 ANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINKPELVQDMVKQVRNQVE 149
Query: 272 VP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
P VS KIRI+ D+ +TV+ + E G + VHGRT ++R ++ I ++
Sbjct: 150 TPGFSVSIKIRIHDDLKRTVDLCQKAEATGVSWITVHGRTAEERHQPV---HYDSIKIIK 206
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLD 388
+ ++IPVIANG+I+ L + E TG GVM A G L NPA+F G + +++D
Sbjct: 207 ENMSIPVIANGDIRSLKEAENVWRITGTDGVMVARGLLANPAMFAGYEETPLKCIWDWVD 266
Query: 389 LVAQYPVRLQYARGHVFNMCHHLLTLPE 416
+ + H+ M + + E
Sbjct: 267 IALELGTPYMCFHQHLMYMMEKITSRQE 294
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+Q
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTTNQGDCPLIVQ 87
>MGI|MGI:1919166 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 MGI:MGI:1919166 Gene3D:3.20.20.70
GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313
KO:K05545 OrthoDB:EOG4ZCT4T EMBL:AK010138 EMBL:BC109351
IPI:IPI00109359 RefSeq:NP_082278.1 UniGene:Mm.62979
ProteinModelPortal:Q32M08 SMR:Q32M08 STRING:Q32M08 PRIDE:Q32M08
Ensembl:ENSMUST00000020977 GeneID:71916 KEGG:mmu:71916
UCSC:uc007nhr.1 GeneTree:ENSGT00550000074907 InParanoid:Q32M08
NextBio:334944 Bgee:Q32M08 CleanEx:MM_DUS4L Genevestigator:Q32M08
GermOnline:ENSMUSG00000020648 Uniprot:Q32M08
Length = 324
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 96/268 (35%), Positives = 146/268 (54%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+QF
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIIAADFVRSIKARDSEFTTNQGDCPLIVQFA 89
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ 271
ND++ L++AA L P+ +GIDIN GCPQ A YGA L + L+ ++V +R V+
Sbjct: 90 ANDARLLSDAALLVCPYANGIDINCGCPQRWAMADGYGACLINKPELVHDMVRQVRNRVE 149
Query: 272 VP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
P VS KIRI+ D+ +T++ R E G + VHGRTV++R ++ I ++
Sbjct: 150 SPRFSVSIKIRIHDDLARTIDLCRKAEATGVSWITVHGRTVEERHQPV---HYDAIKMIK 206
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLD 388
+ ++IP++ANG+I+ L + E TG GVM A G L NPA+F G + +++D
Sbjct: 207 ENVSIPIVANGDIRSLKEAENVWQMTGTDGVMVARGLLANPAMFAGYEETPLKCIWDWVD 266
Query: 389 LVAQYPVRLQYARGHVFNMCHHLLTLPE 416
+ + H+ M + + E
Sbjct: 267 ISLELGTPFMCFHQHLMYMMEKITSRQE 294
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 36/121 (29%), Positives = 55/121 (45%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQRT 141
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+Q
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIIAADFVRSIKARDSEFTTNQGDCPLIVQFA 89
Query: 142 IFPR--LGSPRFILAPMVDASEL----PWR-LLSRRYGSHLCYTPMVSAHQFIADKKLRQ 194
L ++ P + ++ P R ++ YG+ L P + H + + R
Sbjct: 90 ANDARLLSDAALLVCPYANGIDINCGCPQRWAMADGYGACLINKPEL-VHDMVRQVRNRV 148
Query: 195 E 195
E
Sbjct: 149 E 149
>DICTYBASE|DDB_G0291360 [details] [associations]
symbol:dus4l "tRNA-dihydrouridine synthase 4-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 dictyBase:DDB_G0291360
GO:GO:0005739 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042 GO:GO:0017150
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY RefSeq:XP_635163.1
ProteinModelPortal:Q54ES7 STRING:Q54ES7 EnsemblProtists:DDB0238074
GeneID:8628109 KEGG:ddi:DDB_G0291360 ProtClustDB:CLSZ2429554
Uniprot:Q54ES7
Length = 344
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 95/270 (35%), Positives = 150/270 (55%)
Query: 132 EDRPLII-----QRTIFPRLGSPRF--ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAH 184
ED+P++ ++ + R+ S F I APMV S LP+R+L +++G + YTPM+ A
Sbjct: 31 EDKPIVKIYDSDKQNLMDRINSGEFMKIQAPMVRFSRLPFRMLVKKWGCDITYTPMIMAA 90
Query: 185 QFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQM-VA 243
+F + R D PLI+QF N+++ L AA+ + +C GIDIN GCPQ V
Sbjct: 91 EFNRSEAARDSDFTINKLDEPLIVQFGVNNAEELVSAAEKVKDYCQGIDINCGCPQRWVM 150
Query: 244 KRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLA 303
K G +GA L + ++V + V +P+S KIR+ D+ T+E A+ ER G +
Sbjct: 151 KEG-FGANLLLHPERIYDMVKQINNRVPIPISIKIRVQSDLKDTIELAKRAERIGVSWIT 209
Query: 304 VHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAE 363
VHGRT + + ++ I V+ +T+PV ANG++ L+ +TGV GVM+A
Sbjct: 210 VHGRTSAMKSSHP--VDYDAIKLVKDNVTLPVFANGDVFTLSQSNEIREKTGVNGVMSAR 267
Query: 364 GNLYNPALFTGQTRPAWELASEYLDLVAQY 393
G L NPALF G + E +++++ ++Y
Sbjct: 268 GLLTNPALFQGYDKTPIECIKDFINIYSEY 297
>CGD|CAL0003746 [details] [associations]
symbol:orf19.966 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
CGD:CAL0003746 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000063
EMBL:AACQ01000062 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05545 RefSeq:XP_716804.1
RefSeq:XP_716864.1 ProteinModelPortal:Q5A4Y0 STRING:Q5A4Y0
GeneID:3641524 GeneID:3641580 KEGG:cal:CaO19.8581
KEGG:cal:CaO19.966 Uniprot:Q5A4Y0
Length = 339
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 107/325 (32%), Positives = 166/325 (51%)
Query: 131 PEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADK 190
P+ RP + + + G P +I PMV S+LP+R L R Y + YTPM+ A +F+ ++
Sbjct: 9 PKYRPTEVIKQCQEK-GRPAYIAGPMVRYSKLPFRELCRFYDVDIVYTPMILAREFVRNE 67
Query: 191 KLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGA 250
R + D+ +I+Q N+ + + ++ P DGI IN GCP R GA
Sbjct: 68 VARSTDFTTNDSDKCVIVQVGVNNVDDFMKFIEMIHPFVDGIGINCGCPIKEQVREGIGA 127
Query: 251 YLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRT 308
L D L+ L+ + + + + KIRI++D+N+T+++ + AG L VHGRT
Sbjct: 128 ALMSDPDLVAELIKTAKDKYGDSICIDTKIRIHRDINQTIDFVNKVVEAGTDTLTVHGRT 187
Query: 309 VDQRGMNTGLASWEHITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLY 367
+ R ++ + + I +R+ +T IPVIANG+ L D + + TGV GVM+A G L
Sbjct: 188 KNTR--SSVPVNLDAIKIIRENVTTIPVIANGDCFTLTDFQKIVDYTGVDGVMSARGVLA 245
Query: 368 NPALFTGQTRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKT 427
NPALFTG + W +L LV Y + + A+ +HL L E+ R V
Sbjct: 246 NPALFTGLDKTPWSAVEMFLHLVTAYGLPYKLAQ-------YHLAKLMEDVIPRKYVKAI 298
Query: 428 NHIKDLRKAVDMLRERFIDYHEGRK 452
N K++ +D L E F +G K
Sbjct: 299 NEKKNMVDIIDYLDEHFDLKRKGDK 323
>UNIPROTKB|J3QQL9 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC135056 HGNC:HGNC:30086
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
Ensembl:ENST00000577907 Uniprot:J3QQL9
Length = 152
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 79/150 (52%), Positives = 105/150 (70%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST--PED 203
L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L PED
Sbjct: 14 LRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEVCPED 73
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 263
RPLI+Q AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL ++
Sbjct: 74 RPLIVQ-----------AALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMI 122
Query: 264 SSLRQAVQVPVSCKIRIYQDVNKTVEYARM 293
+ + VPV+CKIR++ +++KTV YA+M
Sbjct: 123 LLAHEKLSVPVTCKIRVFPEIDKTVRYAQM 152
Score = 193 (73.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 39/73 (53%), Positives = 50/73 (68%)
Query: 73 WTQ-LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST- 130
W++ L R ++APMVD SEL WRLLSRR+G+ LCYTPM+ A F+ D R+E L
Sbjct: 10 WSRTLRGARHVVAPMVDQSELAWRLLSRRHGAQLCYTPMLHAQVFVRDANYRKENLYCEV 69
Query: 131 -PEDRPLIIQRTI 142
PEDRPLI+Q +
Sbjct: 70 CPEDRPLIVQAAL 82
>UNIPROTKB|A6QPA8 [details] [associations]
symbol:DUS4L "DUS4L protein" species:9913 "Bos taurus"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 EMBL:DAAA02010587
EMBL:BC149229 IPI:IPI00866854 RefSeq:NP_001095407.1
UniGene:Bt.13512 STRING:A6QPA8 Ensembl:ENSBTAT00000029128
GeneID:511017 KEGG:bta:511017 InParanoid:A6QPA8 OMA:YLENEHK
NextBio:20869728 Uniprot:A6QPA8
Length = 238
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 84/210 (40%), Positives = 124/210 (59%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
I APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+QF
Sbjct: 30 ICAPMVRYSKLSFRTLVRKYDCDLCYTPMIVAADFVRSAKARDSEFTTNQGDCPLIVQFA 89
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ 271
ND++ L++AA++ P+ +GIDIN GCPQ A YGA L + L+ ++V +R V+
Sbjct: 90 ANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACLINKPELVRDMVKQVRNQVE 149
Query: 272 VP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
P VS KIRI+ D+ +TV+ R E G + VHGRTV++R +E I ++
Sbjct: 150 NPRFSVSIKIRIHDDLTRTVDLCRKAEATGVSWITVHGRTVEERHQPV---HYEAIKIIK 206
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAG 358
++++IP++ANG+I+ L + E TG G
Sbjct: 207 ESMSIPIVANGDIRSLKEAENVWHTTGTDG 236
Score = 121 (47.7 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
I APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+Q
Sbjct: 30 ICAPMVRYSKLSFRTLVRKYDCDLCYTPMIVAADFVRSAKARDSEFTTNQGDCPLIVQ 87
>UNIPROTKB|I3LP14 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000074907 OMA:YLENEHK EMBL:FP565643
Ensembl:ENSSSCT00000023658 Uniprot:I3LP14
Length = 237
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 84/207 (40%), Positives = 123/207 (59%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+QF
Sbjct: 32 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQFA 91
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQ 271
ND++ L++AA++ P+ +GIDIN GCPQ A YGA L + L+ ++V +R V+
Sbjct: 92 ANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACLINKPELVKDMVKQVRNQVE 151
Query: 272 VP---VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
P VS KIRI+ D+ +TV+ R E G + VHGRTV++R +E I ++
Sbjct: 152 NPRFSVSIKIRIHSDLTRTVDLCRKAEATGVSWITVHGRTVEERHQPV---HYEAIKIIK 208
Query: 329 KALTIPVIANGNIQCLADVEACLAQTG 355
++++IPVIANG+I+ L + E TG
Sbjct: 209 ESMSIPVIANGDIRSLKEAENVWHMTG 235
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+Q
Sbjct: 32 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVRSVKARDSEFTTNQGDCPLIVQ 89
>FB|FBgn0032750 [details] [associations]
symbol:CG10495 species:7227 "Drosophila melanogaster"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:AE014134 Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AY069347 RefSeq:NP_609939.1
UniGene:Dm.465 SMR:Q9VJ06 STRING:Q9VJ06 EnsemblMetazoa:FBtr0081150
GeneID:35179 KEGG:dme:Dmel_CG10495 UCSC:CG10495-RA
FlyBase:FBgn0032750 InParanoid:Q9VJ06 OrthoDB:EOG4X3FH5
GenomeRNAi:35179 NextBio:792243 Uniprot:Q9VJ06
Length = 396
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 111/335 (33%), Positives = 165/335 (49%)
Query: 128 MSTPEDRPLIIQRTIFPRLGSPRF-ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQF 186
M P+ RP +F S + APMV S+L +R L R G L +TPM+ +
Sbjct: 1 MHLPQQRPHHDIAAMFAEAQSDFVRVSAPMVRYSKLEFRRLVRLNGVQLAFTPMMISDSI 60
Query: 187 IADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRG 246
+K RQ + +D+PLI QF D +A+L P+ DGID+N GCPQ A
Sbjct: 61 NNSEKARQNEFSTGADDQPLIAQFAAKDPTEFVTSAQLIYPYVDGIDLNCGCPQSWAMAK 120
Query: 247 HYGAYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIY---QDVNKTVEYARMLERAGCQL 301
YG + L+ +V +R+ + VS K+R+ + + +T++ AR LE AG
Sbjct: 121 GYGCGMLRQPELVHQVVQEVRRTLPGDFSVSVKMRLLGGEESLQRTIDLARQLESAGVTF 180
Query: 302 LAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMT 361
L +HGRT Q+ L ++ VR++L IP+I NGN++ D QTG AGVM
Sbjct: 181 LTLHGRTPAQKHSKDTL-DIPAMSQVRQSLQIPLIVNGNVESYRDACDMHEQTGAAGVMA 239
Query: 362 AEGNLYNPALFT-----GQTRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPE 416
A G L NPALF G+T P ++LD+ + L +F HH LT
Sbjct: 240 ARGLLANPALFNSNYPDGKTTPL-SCVQQWLDIASAAGDNL------LFQCFHHHLTFMY 292
Query: 417 NSDV-RLLVGKTNHIKDLRKAVDMLRERF-IDYHE 449
++ + R L + N + + VD L+E + ++Y E
Sbjct: 293 SAQMKRDLRVQFNSLGSKEQVVDFLKEHYNLEYSE 327
>SGD|S000004397 [details] [associations]
symbol:DUS4 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA;ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=ISS;IMP] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
SGD:S000004397 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:BK006945
EMBL:U19729 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 OrthoDB:EOG4PZNGJ EMBL:AY558586
PIR:S55961 RefSeq:NP_013509.1 ProteinModelPortal:Q06063 SMR:Q06063
IntAct:Q06063 STRING:Q06063 PaxDb:Q06063 EnsemblFungi:YLR405W
GeneID:851121 KEGG:sce:YLR405W CYGD:YLR405w
BioCyc:MetaCyc:MONOMER-16679 NextBio:967845 Genevestigator:Q06063
GermOnline:YLR405W Uniprot:Q06063
Length = 367
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 105/320 (32%), Positives = 162/320 (50%)
Query: 130 TPEDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIAD 189
T E PL I +T G P I PMV S+LP+R L R Y + Y+PM+ A +++ +
Sbjct: 20 TEETDPLHIIKTRQKTHGRPVTIAGPMVRYSKLPFRQLCREYNVDIVYSPMILAREYVRN 79
Query: 190 KKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYG 249
+ R L + ED PLI+Q N+ +L + ++ P+CDGI IN GCP R G
Sbjct: 80 EHARISDLSTNNEDTPLIVQVGVNNVADLLKFVEMVAPYCDGIGINCGCPIKEQIREGIG 139
Query: 250 AYLQDDWPLLTNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGR 307
L + LL ++V +++ ++ + KIRI++ +++TVE R L AG + +HGR
Sbjct: 140 CALIYNSDLLCSMVHAVKDKYGDKLRIETKIRIHEALDETVELCRKLCDAGVDWITIHGR 199
Query: 308 TVDQRGMN-TGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNL 366
T R L + ++I +PVIANG+ L+D+E TG GVM G L
Sbjct: 200 TRRTRSSQPANLDAIKYIIENISDKNVPVIANGDCFKLSDLERITKYTGAHGVMAVRGLL 259
Query: 367 YNPALFTGQTRPAWELASEYLDLVAQYPVRLQYARGHVFNMC-HHLLTLPENSDVRL-LV 424
NPALF G T W ++ Y L++ G F + HHL + EN +++ L+
Sbjct: 260 SNPALFAGYTTCPWGCIEKFC-----YWA-LEFG-GLPFQLAQHHLYCMLENMELKKSLL 312
Query: 425 GKTNHIKDLRKAVDMLRERF 444
K ++K+ +D + F
Sbjct: 313 KKMMNLKNYISLIDWFNKTF 332
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 77 GSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPL 136
G P I PMV S+LP+R L R Y + Y+PM+ A +++ ++ R L + ED PL
Sbjct: 37 GRPVTIAGPMVRYSKLPFRQLCREYNVDIVYSPMILAREYVRNEHARISDLSTNNEDTPL 96
Query: 137 IIQ 139
I+Q
Sbjct: 97 IVQ 99
>TIGR_CMR|GSU_1005 [details] [associations]
symbol:GSU_1005 "dihydrouridine synthase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
OMA:PIARKHI HOGENOM:HOG000217853 RefSeq:NP_952059.1
ProteinModelPortal:Q74EF7 GeneID:2685628 KEGG:gsu:GSU1005
PATRIC:22024782 ProtClustDB:CLSK828131
BioCyc:GSUL243231:GH27-991-MONOMER Uniprot:Q74EF7
Length = 325
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 98/263 (37%), Positives = 145/263 (55%)
Query: 146 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRP 205
LG+ ILAPM + LP+RLL+R G+ LC+T MVS + + + K E+L S P DRP
Sbjct: 12 LGN-NLILAPMAGITNLPFRLLAREQGAGLCFTEMVSVNGLVREGKKSFELLRSVPGDRP 70
Query: 206 LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVS 264
L IQ G+D + A + + D IDIN+GCP + V G G+ L + + +V
Sbjct: 71 LGIQLFGDDPDVMGRVAATVDGYGDLIDINMGCPVKKVVGTGA-GSALMREPDKVRAIVR 129
Query: 265 SLRQAVQVPVSCKIRI---YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASW 321
++R+A ++P++ KIR +D N ++ AR+ E GC + +H R+ Q M G A W
Sbjct: 130 AVRRATRLPLTVKIRSGWSCEDAN-FIQIARIAEEEGCNAVTLHPRSRAQ--MFEGTADW 186
Query: 322 EHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWE 381
+ +++A+ IPVI +G++ ADV A L +TG GVM A G L NP +F R A +
Sbjct: 187 TKLAELKQAVAIPVIGSGDLFSAADVAAMLDRTGCDGVMIARGALGNPWIF----RQALD 242
Query: 382 LASEYLDLVAQYPVRLQYARGHV 404
L + A RL AR H+
Sbjct: 243 LMAGREPAAASPAERLAVARRHL 265
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 76 LGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRP 135
LG+ ILAPM + LP+RLL+R G+ LC+T MVS + + + K E+L S P DRP
Sbjct: 12 LGN-NLILAPMAGITNLPFRLLAREQGAGLCFTEMVSVNGLVREGKKSFELLRSVPGDRP 70
Query: 136 LIIQ 139
L IQ
Sbjct: 71 LGIQ 74
>WB|WBGene00016674 [details] [associations]
symbol:C45G9.2 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:FO080873 PIR:A88449
RefSeq:NP_498078.2 ProteinModelPortal:Q09504 SMR:Q09504
STRING:Q09504 EnsemblMetazoa:C45G9.2 GeneID:183479
KEGG:cel:CELE_C45G9.2 UCSC:C45G9.2 CTD:183479 WormBase:C45G9.2
InParanoid:Q09504 NextBio:921288 Uniprot:Q09504
Length = 284
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 88/241 (36%), Positives = 125/241 (51%)
Query: 156 MVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCGNDS 215
MV S+L +R L R Y +C+TPM+ A FI +K R L D PLI+QF +D
Sbjct: 1 MVRYSKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSVCEGDSPLIVQFATDDP 60
Query: 216 KNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVP-- 273
L+EAA++ G+D+N GCP+ + +G+ L LL ++V R + P
Sbjct: 61 FVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELLADMVRQTRARIPDPDF 120
Query: 274 -VSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVRKALT 332
VS KIRI D+ KTV+ R E AG L VHGRT QR + + + V+ +++
Sbjct: 121 SVSLKIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQA---LRIVKDSVS 177
Query: 333 IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQ 392
+P+IANG I + QTGV G+M A G L NPALF G + ++ L +
Sbjct: 178 VPIIANGGITTREEALFLAEQTGVDGIMAANGLLDNPALFAGHEHTPSDCVENFMRLSRE 237
Query: 393 Y 393
Y
Sbjct: 238 Y 238
>POMBASE|SPCC777.15 [details] [associations]
symbol:SPCC777.15 "tRNA dihydrouridine synthase Dus4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
PomBase:SPCC777.15 GO:GO:0005739 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 PANTHER:PTHR11082
KO:K05545 OMA:AGPMVRY PIR:T11721 RefSeq:NP_588262.1
ProteinModelPortal:O74553 STRING:O74553 EnsemblFungi:SPCC777.15.1
GeneID:2538996 KEGG:spo:SPCC777.15 OrthoDB:EOG4PZNGJ
NextBio:20800171 Uniprot:O74553
Length = 326
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 98/299 (32%), Positives = 148/299 (49%)
Query: 149 PRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLII 208
P I APMV S+LP+R L R Y + + YTPM+ A +F+ K R + D LI+
Sbjct: 20 PVHIAAPMVRYSKLPFRQLVRDYNTDIVYTPMILAKEFLHPKG-RYFDFSTNDADASLIL 78
Query: 209 QFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQ 268
QF +D L +AA+L P+ DGI IN GCPQ A + G+ L D+ + LV +++
Sbjct: 79 QFGVDDPVILEKAAQLVGPYVDGIGINCGCPQTWAIQEGIGSALLDEPEKVHKLVRAVKS 138
Query: 269 AV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITA 326
+ KIRI +D+NKT +++E++G ++ VHGRT R ++ + + I
Sbjct: 139 TLGESFCTEVKIRIAKDLNKTRHLMQVIEKSGADIITVHGRTRQDR--SSFPVNLDAIRE 196
Query: 327 VRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQTRPAWELASEY 386
VR + IPV+ANG+++ L T G+M+A G L NPALF G W +
Sbjct: 197 VRPCVQIPVVANGDVKSLRKGLEIAKYTETQGIMSARGLLENPALFAGYEETPWGCVERF 256
Query: 387 LDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLRKAVDMLRERFI 445
L Y + H+ M + T E R+ + K + +D L E F+
Sbjct: 257 LWYSTSYSLNFHLFYHHLTTMMGQMTTKRE----RMTIPKDS----FASVMDWLDEHFV 307
>TAIR|locus:2114713 [details] [associations]
symbol:AT3G49640 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006808 "regulation of nitrogen
utilization" evidence=ISS] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
EMBL:CP002686 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05543 OMA:KEMIMHY
IPI:IPI00548775 RefSeq:NP_190533.3 UniGene:At.74022
ProteinModelPortal:F4IY04 SMR:F4IY04 PRIDE:F4IY04
EnsemblPlants:AT3G49640.1 GeneID:824126 KEGG:ath:AT3G49640
Uniprot:F4IY04
Length = 329
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 90/309 (29%), Positives = 159/309 (51%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFI-ADKKLR-------------QE 195
+ +LAPMV L +R+L+ YG+ + Y + H+ + +++L
Sbjct: 6 KLVLAPMVRVGTLSFRMLAAEYGADITYGEEIIDHKLVKCERRLNVASGTSEFVEKGTDN 65
Query: 196 ILMSTPEDRP--LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQ 253
++ ST ++ ++ Q +D+ +A+++ IDIN+GCP+ + +G GA L
Sbjct: 66 VVFSTCDEEKSRVVFQMGTSDAVRALKASEIVCNDVATIDINMGCPKAFSIQGGMGAALL 125
Query: 254 DDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRG 313
L+ +++++L++ + VPV+CKIR+ + TVE AR +E+ G LAVHGR + R
Sbjct: 126 SKPELIHDILATLKRNLDVPVTCKIRLLKSPADTVELARRIEKLGVPALAVHGRKIADRP 185
Query: 314 MNTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373
+ A W+ I V AL+IPVIANG++ D TG A VM A G ++N ++F+
Sbjct: 186 RDP--AKWDEIADVVAALSIPVIANGDVLEYDDFSRIKTATGAASVMVARGAMWNASIFS 243
Query: 374 GQTRPAWE-LASEYLDLVAQYPVRLQYARGHVFNM-CHH-LLTLPENSDVRLLVGKTNHI 430
+ + WE + +YL + ++ + + M HH L LPE + K + +
Sbjct: 244 PKGKSHWEDVKKKYLRKSILWNNDVKSTKYTIKEMIAHHSCLELPEGKSIN----KADTL 299
Query: 431 KDLRKAVDM 439
+DL + D+
Sbjct: 300 EDLARLYDL 308
>UNIPROTKB|Q9NX74 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005783
GO:GO:0005739 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 EMBL:CH471092 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 EMBL:AB101210
EMBL:AK000406 EMBL:AK290578 EMBL:BC006527 IPI:IPI00015804
RefSeq:NP_001258691.1 RefSeq:NP_060273.1 UniGene:Hs.534460
ProteinModelPortal:Q9NX74 SMR:Q9NX74 IntAct:Q9NX74 STRING:Q9NX74
PhosphoSite:Q9NX74 DMDM:73620832 PaxDb:Q9NX74 PRIDE:Q9NX74
DNASU:54920 Ensembl:ENST00000358896 Ensembl:ENST00000565263
GeneID:54920 KEGG:hsa:54920 UCSC:uc002evi.3 CTD:54920
GeneCards:GC16P068058 HGNC:HGNC:26014 HPA:HPA042560 HPA:HPA043528
MIM:609707 neXtProt:NX_Q9NX74 PharmGKB:PA142671937
HOGENOM:HOG000195580 HOVERGEN:HBG079551 InParanoid:Q9NX74 KO:K05543
OMA:YHNKLIL OrthoDB:EOG4MW85W PhylomeDB:Q9NX74 GenomeRNAi:54920
NextBio:57992 ArrayExpress:Q9NX74 Bgee:Q9NX74 CleanEx:HS_DUS2L
Genevestigator:Q9NX74 Uniprot:Q9NX74
Length = 493
Score = 334 (122.6 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 92/294 (31%), Positives = 147/294 (50%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + I K++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
+ + Q +D++ A+L E GID+N+GCP+ + +G GA L
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
D + ++S+L + + PV+CKIRI + T+ + +ER G +AVHGR ++R
Sbjct: 133 DPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQ 192
Query: 315 NTGLASWEHITAVRKALTIPVIANG----NIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370
+ S E I A+ L+IPVIANG +IQ +D+E T + VM A ++NP+
Sbjct: 193 HP--VSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATAASSVMVARAAMWNPS 250
Query: 371 LFTGQ-TRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLL 423
+F + RP E+ +Y+ QY + + +C L E+ RLL
Sbjct: 251 IFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTK---YCLCQMLREQLESPQGRLL 301
>MGI|MGI:1913619 [details] [associations]
symbol:Dus2l "dihydrouridine synthase 2-like (SMM1, S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 MGI:MGI:1913619 GO:GO:0005783
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 Gene3D:3.30.160.20
GO:GO:0003725 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580 HOVERGEN:HBG079551
KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W EMBL:AK009391 EMBL:BC058431
IPI:IPI00110119 RefSeq:NP_079794.1 UniGene:Mm.287500 PDB:1WHN
PDBsum:1WHN ProteinModelPortal:Q9D7B1 SMR:Q9D7B1 STRING:Q9D7B1
PhosphoSite:Q9D7B1 PaxDb:Q9D7B1 PRIDE:Q9D7B1
Ensembl:ENSMUST00000034375 GeneID:66369 KEGG:mmu:66369
GeneTree:ENSGT00550000075019 InParanoid:Q9D7B1
EvolutionaryTrace:Q9D7B1 NextBio:321469 Bgee:Q9D7B1
Genevestigator:Q9D7B1 GermOnline:ENSMUSG00000031901 Uniprot:Q9D7B1
Length = 493
Score = 332 (121.9 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 92/294 (31%), Positives = 145/294 (49%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + + K++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEVLSTVDFVAPDDRV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
+ + Q +D++ A+L E GID+N+GCP+ + +G GA L
Sbjct: 73 VFRTCEREQSRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYSTKGGMGAALLS 132
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
D + ++S+L + PV+CKIRI + T+ + +ER G +AVHGR D+R
Sbjct: 133 DPDKIEKILSTLVKGTHRPVTCKIRILPSLEDTLNLVKRIERTGISAIAVHGRNRDERPQ 192
Query: 315 NTGLASWEHITAVRKALTIPVIANG----NIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370
+ S E I A+ + L+IPVIANG +IQ D+E T + VM A ++NP+
Sbjct: 193 HP--VSCEVIRAIAETLSIPVIANGGSHDHIQQHVDIEDFRQATAASSVMVARAAMWNPS 250
Query: 371 LFTGQ-TRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLL 423
+F RP E+ +Y+ QY + + +C L E+ RLL
Sbjct: 251 IFLKDGLRPLEEVMQKYIRYAVQYDNHYTNTK---YCLCQMLREQLESPQGRLL 301
>UNIPROTKB|Q607L4 [details] [associations]
symbol:MCA1745 "tRNA-dihydrouridine synthase"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE017282 GenomeReviews:AE017282_GR GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 KO:K05540
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 OMA:PIARKHI
RefSeq:YP_114184.1 ProteinModelPortal:Q607L4 GeneID:3104455
KEGG:mca:MCA1745 PATRIC:22607332 Uniprot:Q607L4
Length = 327
Score = 318 (117.0 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 91/234 (38%), Positives = 123/234 (52%)
Query: 145 RLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFI-ADKK--LRQEILMSTP 201
RL SP ILAPM ++LP+R L R++G+ L + M+SA + A +K LRQ+
Sbjct: 7 RLSSP-VILAPMAGVTDLPFRRLCRQFGAGLAVSEMISASPALQATRKSRLRQD---HRG 62
Query: 202 EDRPLIIQFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLT 260
E P+ +Q G D + + EAA+ + D IDIN+GCP G+ L D L+
Sbjct: 63 EPGPISVQIVGADPREMAEAARRTVDLGADIIDINMGCPAKKVCNVAAGSALLRDEKLVA 122
Query: 261 NLVSSLRQAVQVPVSCKIRIYQDV--NKTVEYARMLERAGCQLLAVHGRTVDQRGMN-TG 317
N++ ++ QAV VPV+ KIR D V ++ E AG + L VHGRT R G
Sbjct: 123 NILEAVVQAVPVPVTLKIRTGWDSASRNAVSIGKIAESAGIRALTVHGRT---RACGFAG 179
Query: 318 LASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
A + IT V+KA+ IPVIANG+I EA L TG VM G P L
Sbjct: 180 AAEYSTITEVKKAIGIPVIANGDIDSPGKAEAVLRSTGADAVMIGRGAWGRPWL 233
>UNIPROTKB|Q0VC60 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 SMART:SM00358
InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580
HOVERGEN:HBG079551 KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W
GeneTree:ENSGT00550000075019 EMBL:DAAA02046690 EMBL:BC120342
IPI:IPI00715355 RefSeq:NP_001068887.1 UniGene:Bt.15762 SMR:Q0VC60
STRING:Q0VC60 Ensembl:ENSBTAT00000019500 GeneID:509795
KEGG:bta:509795 InParanoid:Q0VC60 NextBio:20869132 Uniprot:Q0VC60
Length = 493
Score = 328 (120.5 bits), Expect = 7.8e-28, P = 7.8e-28
Identities = 91/294 (30%), Positives = 146/294 (49%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDR- 204
+ ILAPMV LP RLL+ YG+ + Y + + + K++ E L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELVDLKMLQCKRVVNEALSTVDFVAPDDRV 72
Query: 205 ----------PLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
++ Q +D++ A+L E GID+N+GCP+ + +G GA L
Sbjct: 73 VFRTCEREQSKVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYSTKGGMGAALLS 132
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
D + ++S+L + + PV+CKIRI + T+ + +ER G +AVHGR ++R
Sbjct: 133 DPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQ 192
Query: 315 NTGLASWEHITAVRKALTIPVIANG----NIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370
+ S E I A+ + L+IPVIANG +IQ D+E T + VM A ++NP+
Sbjct: 193 HP--VSCEAIKAIAETLSIPVIANGGSHDHIQGYLDIEDFRRATAASSVMVARAAMWNPS 250
Query: 371 LFTGQ-TRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLL 423
+F + RP E+ +Y+ QY + + +C L E+ RLL
Sbjct: 251 IFLKEGPRPLEEVMQKYIRYAVQYDNHYTNTK---YCLCQMLREQLESPQGRLL 301
>UNIPROTKB|I3LES5 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 SMART:SM00358
InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:54920 KO:K05543 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:FP565347 RefSeq:XP_003355825.1
Ensembl:ENSSSCT00000028203 GeneID:100621573 KEGG:ssc:100621573
Uniprot:I3LES5
Length = 493
Score = 327 (120.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 91/294 (30%), Positives = 146/294 (49%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + + K++ E L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEALSTVDFVAPDDRV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
+ + Q +D++ AKL E GID+N+GCP+ + +G GA L
Sbjct: 73 VFRTCEREQSRVVFQMGTSDAERALAVAKLVENDVAGIDVNMGCPKEYSTKGGMGAALLS 132
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
D + ++S+L + + PV+CKIR+ + T+ + +ER G +AVHGR ++R
Sbjct: 133 DPDKIEKILSTLVKGTRRPVTCKIRLLPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQ 192
Query: 315 NTGLASWEHITAVRKALTIPVIANG----NIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370
+ S E I A+ + L+IPVIANG +IQ D+E T + VM A ++NP+
Sbjct: 193 HP--VSCEAIKAIAETLSIPVIANGGSHDHIQKYLDIEDFRQATAASSVMVARAAMWNPS 250
Query: 371 LFTGQ-TRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLL 423
+F + RP E+ +Y+ QY + + +C L E+ RLL
Sbjct: 251 VFLKEGPRPLEEVMQKYIRYAVQYD---NHHTNTKYCLCQMLREQLESPQGRLL 301
>RGD|1305612 [details] [associations]
symbol:Dus2l "dihydrouridine synthase 2-like, SMM1 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 RGD:1305612
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660 Gene3D:3.30.160.20
GO:GO:0003725 EMBL:CH473972 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 HOGENOM:HOG000195580
HOVERGEN:HBG079551 KO:K05543 OMA:YHNKLIL OrthoDB:EOG4MW85W
GeneTree:ENSGT00550000075019 EMBL:BC158728 IPI:IPI00363521
RefSeq:NP_001099651.1 UniGene:Rn.18304 SMR:B0BN89 STRING:B0BN89
Ensembl:ENSRNOT00000026827 GeneID:291978 KEGG:rno:291978
UCSC:RGD:1305612 NextBio:633545 Genevestigator:B0BN89
Uniprot:B0BN89
Length = 493
Score = 327 (120.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 85/264 (32%), Positives = 135/264 (51%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + + +++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCRRVVNEVLSTVDFVAPDDRV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
+ + Q +D++ A+L E GID+N+GCP+ + +G GA L
Sbjct: 73 VFRTCEREQSRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKEYSTKGGMGAALLS 132
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
D + ++S+L + PV+CKIRI + T+ + +ER G +AVHGR D+R
Sbjct: 133 DPDKIEKILSTLVKGTHRPVTCKIRILPSLEDTLNLVKRIERTGISAIAVHGRNRDERPQ 192
Query: 315 NTGLASWEHITAVRKALTIPVIANG----NIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370
+ S E I A+ + L+IPVIANG +IQ D+E T + VM A ++NP+
Sbjct: 193 HP--VSCEVIRAIAETLSIPVIANGGSHDHIQQHLDIEDFRQATAASSVMVARAAMWNPS 250
Query: 371 LFTGQ-TRPAWELASEYLDLVAQY 393
+F RP E+ +Y+ QY
Sbjct: 251 IFLKDGLRPLEEVMQKYIRYAVQY 274
>UNIPROTKB|E2RKU2 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
SMART:SM00358 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 KO:K05543 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:AAEX03004122 RefSeq:XP_546866.3
ProteinModelPortal:E2RKU2 Ensembl:ENSCAFT00000032371 GeneID:489746
KEGG:cfa:489746 NextBio:20862882 Uniprot:E2RKU2
Length = 493
Score = 323 (118.8 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 89/294 (30%), Positives = 146/294 (49%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + + K++ E+L + P++R
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMLQCKRVVNEVLSTVDFVAPDERV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
+ + Q +D+ AKL E GID+N+GCP+ + +G GA L
Sbjct: 73 VFRTCEREQSRVVFQMGTSDADRALAVAKLVENDVAGIDVNMGCPKEYSTKGGMGAALLS 132
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
D + ++S+L + ++ PV+CKIRI + T+ + +ER G + VHGR ++R
Sbjct: 133 DPDKIEKILSTLVKGIRRPVTCKIRILPSLEDTLSLVKRIERTGIAAVTVHGRKREERPQ 192
Query: 315 NTGLASWEHITAVRKALTIPVIANG----NIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370
+ S E I A+ + ++IPVIANG +IQ D+E T + VM A ++NP+
Sbjct: 193 HP--VSCEAIKAIAETVSIPVIANGGSHDHIQKYLDIEDFRQATAASSVMVARAAMWNPS 250
Query: 371 LFTGQ-TRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLL 423
+F + RP E+ +Y+ QY + + +C L E+ RLL
Sbjct: 251 IFLKEGLRPLEEVMQKYIRYAVQYENHYTNTK---YCLCQMLREQLESPQGRLL 301
>UNIPROTKB|Q81VW4 [details] [associations]
symbol:BA_0075 "tRNA-dihydrouridine synthase" species:1392
"Bacillus anthracis" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR004652 InterPro:IPR013785
InterPro:IPR018517 InterPro:IPR024036 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
HOGENOM:HOG000217853 RefSeq:NP_842644.2 ProteinModelPortal:Q81VW4
IntAct:Q81VW4 DNASU:1087319 EnsemblBacteria:EBBACT00000009344
GeneID:1087319 KEGG:ban:BA_0075 PATRIC:18777630
ProtClustDB:CLSK872617 Uniprot:Q81VW4
Length = 339
Score = 299 (110.3 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 77/222 (34%), Positives = 119/222 (53%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+LAPM +RL + +G+ L MVS + + K ++L ++PL +Q
Sbjct: 21 VLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILLNNKRTLDMLYIDEREKPLSLQIF 80
Query: 212 GNDSKNLTEAAKLAEPH--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA 269
G + + L +AAK + + D IDIN+GCP + GA D + +V+++ A
Sbjct: 81 GGEKETLVDAAKYVDQYTTADIIDINMGCPVPKIVKCDAGAKWLLDPNKIYEMVAAVVDA 140
Query: 270 VQVPVSCKIRIYQDVNK--TVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAV 327
V+ PV+ K+RI D + +E A+ +ERAG Q++AVHGRT Q M G A W+ I V
Sbjct: 141 VEKPVTVKMRIGWDEDHIFAIENAKAVERAGGQVVAVHGRTRVQ--MYEGKADWDIIKQV 198
Query: 328 RKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369
++A+ IPVI NG++ D + L + GV GVM L +P
Sbjct: 199 KQAVNIPVIGNGDVATPQDAKRMLDEIGVDGVMIGRAALGDP 240
>TIGR_CMR|APH_0575 [details] [associations]
symbol:APH_0575 "putative tRNA-dihydrouridine synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 KO:K05540
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 OMA:PIARKHI
RefSeq:YP_505166.1 ProteinModelPortal:Q2GKD5 STRING:Q2GKD5
GeneID:3930783 KEGG:aph:APH_0575 PATRIC:20949816
ProtClustDB:CLSK2766800 BioCyc:APHA212042:GHPM-599-MONOMER
Uniprot:Q2GKD5
Length = 315
Score = 299 (110.3 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 78/224 (34%), Positives = 118/224 (52%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRP-LIIQF 210
ILAPM ++LP+R R+ G+ L + MV++ I K RQ M E P +Q
Sbjct: 11 ILAPMSGVTDLPFRTTVRKLGAGLLISEMVASRAMIL--KTRQS--MQKSEVCPNTSVQL 66
Query: 211 CGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA 269
G + + EAAK+ E ID+N GCP G+ G+ L D + T ++ S+ +A
Sbjct: 67 AGCTPEIMAEAAKINEDLGAKSIDLNFGCPAKKVVDGYAGSALMKDEVIATKIMESVVKA 126
Query: 270 VQVPVSCKIRIYQDVNK--TVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAV 327
V+VPV+ K+R+ D A++ E G Q++ +HGRT Q M +G A W+ + V
Sbjct: 127 VKVPVTVKMRMGWDTTNLNAPTLAKVAEDVGIQMITIHGRTRSQ--MFSGSADWKFVKRV 184
Query: 328 RKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
++ + IPVI NG+I+ L D+ L ++G GVM G P L
Sbjct: 185 KECVKIPVIVNGDIRTLDDIVVALNESGADGVMIGRGAYGKPWL 228
>TIGR_CMR|BA_0075 [details] [associations]
symbol:BA_0075 "TIM-barrel protein, putative, NifR3 family"
species:198094 "Bacillus anthracis str. Ames" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 HOGENOM:HOG000217853 RefSeq:NP_842644.2
ProteinModelPortal:Q81VW4 IntAct:Q81VW4 DNASU:1087319
EnsemblBacteria:EBBACT00000009344 GeneID:1087319 KEGG:ban:BA_0075
PATRIC:18777630 ProtClustDB:CLSK872617 Uniprot:Q81VW4
Length = 339
Score = 299 (110.3 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 77/222 (34%), Positives = 119/222 (53%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+LAPM +RL + +G+ L MVS + + K ++L ++PL +Q
Sbjct: 21 VLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILLNNKRTLDMLYIDEREKPLSLQIF 80
Query: 212 GNDSKNLTEAAKLAEPH--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA 269
G + + L +AAK + + D IDIN+GCP + GA D + +V+++ A
Sbjct: 81 GGEKETLVDAAKYVDQYTTADIIDINMGCPVPKIVKCDAGAKWLLDPNKIYEMVAAVVDA 140
Query: 270 VQVPVSCKIRIYQDVNK--TVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAV 327
V+ PV+ K+RI D + +E A+ +ERAG Q++AVHGRT Q M G A W+ I V
Sbjct: 141 VEKPVTVKMRIGWDEDHIFAIENAKAVERAGGQVVAVHGRTRVQ--MYEGKADWDIIKQV 198
Query: 328 RKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369
++A+ IPVI NG++ D + L + GV GVM L +P
Sbjct: 199 KQAVNIPVIGNGDVATPQDAKRMLDEIGVDGVMIGRAALGDP 240
>TIGR_CMR|NSE_0373 [details] [associations]
symbol:NSE_0373 "putative tRNA-dihydrouridine synthase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 KO:K05540
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 RefSeq:YP_506262.1
ProteinModelPortal:Q2GE34 STRING:Q2GE34 GeneID:3932261
KEGG:nse:NSE_0373 PATRIC:22680819 OMA:ECAKEHL
ProtClustDB:CLSK2527833 BioCyc:NSEN222891:GHFU-398-MONOMER
Uniprot:Q2GE34
Length = 331
Score = 296 (109.3 bits), Expect = 8.1e-26, P = 8.1e-26
Identities = 71/221 (32%), Positives = 115/221 (52%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
ILAPM +++P+R L + +G+ L + M+++ I K + + +P + IQ
Sbjct: 15 ILAPMSGVTDMPYRDLVKSFGAGLVVSEMIASRAMILKTKDTMKKVSLSPREDITAIQLA 74
Query: 212 GNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV 270
G + + EAAK+ E IDIN GCP G+ G+YL D ++ + +AV
Sbjct: 75 GFEPDVMAEAAKINEDMGAKIIDINFGCPVKKVVNGYAGSYLMKDECHAAKILEATVKAV 134
Query: 271 QVPVSCKIRIYQDVN--KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
++PV+ K+R D N + A++ E G +++ +HGRT Q M G + W+ I V+
Sbjct: 135 KIPVTLKMRTGWDENHRNAPKLAKIAEDLGIKMITIHGRTRAQ--MYKGKSDWQFIRTVK 192
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369
+ IPVIANG+I+ D E L ++G G+M G P
Sbjct: 193 NTVKIPVIANGDIKTYEDAERALVESGADGIMIGRGAYGKP 233
>UNIPROTKB|Q87VS1 [details] [associations]
symbol:dusB "tRNA-dihydrouridine synthase B" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE016853 GenomeReviews:AE016853_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217855 KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 RefSeq:NP_794598.1 ProteinModelPortal:Q87VS1
GeneID:1186547 KEGG:pst:PSPTO_4864 PATRIC:20001236
ProtClustDB:CLSK868944 BioCyc:PSYR223283:GJIX-4930-MONOMER
Uniprot:Q87VS1
Length = 337
Score = 295 (108.9 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 95/312 (30%), Positives = 161/312 (51%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
ILAPM ++ P+R L R+ G+ L + MV++ + + + + ++ + P +Q
Sbjct: 16 ILAPMAGVTDQPFRQLCRQLGAGLVVSEMVTSDMSLWNSRKSRLRMIHAGDPEPRSVQIA 75
Query: 212 GNDSKNLTEAAKL-AEPHCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVSSLRQA 269
G D++ + +AA+ E IDIN+GCP + V + A L+D+ L+ +++ ++ A
Sbjct: 76 GGDAQMMADAARANVELGAQIIDINMGCPAKKVCNKAAGSALLKDE-QLVNDILQAVVAA 134
Query: 270 VQVPVSCKIRIYQDV-NKT-VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAV 327
V VPV+ KIR D N+ + A++ E+AG Q LAVHGRT + + TG A ++ I +
Sbjct: 135 VDVPVTLKIRTGWDRDNRNGLTVAKIAEQAGIQALAVHGRT--RADLYTGEAEYDTIAMI 192
Query: 328 RKALTIPVIANGNIQCLADVEACLAQTGVAGVM---TAEGN--LYNPA---LFTGQTRPA 379
++A++IPV ANG+I L TG G++ A+G ++ L TG+T PA
Sbjct: 193 KQAVSIPVFANGDIDSPEKARHVLQATGADGLLIGRAAQGRPWIFREIEHYLLTGKTLPA 252
Query: 380 WELASEYLDLVAQYPVRLQYARGHVFNMC----H---HLLTLPENSDVRLLVGKTNHIKD 432
+ +SE ++ ++ L G V + H +L TLP + R L N ++D
Sbjct: 253 LQ-SSEVERILLEHLAALHVFYGDVMGVRIARKHVGWYLATLPGAREFRALF---NRLED 308
Query: 433 LRKAVDMLRERF 444
+RE F
Sbjct: 309 TEAQCANVREFF 320
>UNIPROTKB|Q3A9L8 [details] [associations]
symbol:CHY_2369 "tRNA-dihydrouridine synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:VTDQPFR Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 RefSeq:YP_361166.1 ProteinModelPortal:Q3A9L8
STRING:Q3A9L8 GeneID:3727443 KEGG:chy:CHY_2369 PATRIC:21277805
HOGENOM:HOG000217853 BioCyc:CHYD246194:GJCN-2368-MONOMER
Uniprot:Q3A9L8
Length = 321
Score = 291 (107.5 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 80/232 (34%), Positives = 123/232 (53%)
Query: 145 RLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFI-ADKKLRQEILMSTPED 203
+L +P I+APM ++ +RL+ + +G+ L T M++ + + K RQ I + E
Sbjct: 9 KLKNP-VIVAPMAGVTDKAFRLICQSFGAGLTVTEMINDLALLHGNSKTRQMIDLQG-EA 66
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQ-MVAKRGHYGAYLQDDWPLLTN 261
P+ +Q G+ + + EAA++ E IDIN+GCP + K G GA L L
Sbjct: 67 MPVAVQIFGSSPEKMAEAARIVEEAGASMIDINMGCPAPKIVKNGE-GAALMLKPELAEK 125
Query: 262 LVSSLRQAVQVPVSCKIRIYQDVN--KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLA 319
+V +++ AV VPVS KIR D N +E+A+ +E AG L+ VHGRT +Q +G A
Sbjct: 126 IVMAVKNAVSVPVSVKIRKGFDDNTVNAIEFAQRMEAAGADLITVHGRTREQ--FYSGKA 183
Query: 320 SWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
WE I V++A+ + V NG++ + L TGV VM + NP L
Sbjct: 184 DWEIIRRVKQAVKVKVAGNGDVDSPQKAKEMLELTGVDFVMIGRAVMGNPWL 235
>TIGR_CMR|CHY_2369 [details] [associations]
symbol:CHY_2369 "putative TIM-barrel protein, NifR3
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:VTDQPFR Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 RefSeq:YP_361166.1 ProteinModelPortal:Q3A9L8
STRING:Q3A9L8 GeneID:3727443 KEGG:chy:CHY_2369 PATRIC:21277805
HOGENOM:HOG000217853 BioCyc:CHYD246194:GJCN-2368-MONOMER
Uniprot:Q3A9L8
Length = 321
Score = 291 (107.5 bits), Expect = 3.0e-25, P = 3.0e-25
Identities = 80/232 (34%), Positives = 123/232 (53%)
Query: 145 RLGSPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFI-ADKKLRQEILMSTPED 203
+L +P I+APM ++ +RL+ + +G+ L T M++ + + K RQ I + E
Sbjct: 9 KLKNP-VIVAPMAGVTDKAFRLICQSFGAGLTVTEMINDLALLHGNSKTRQMIDLQG-EA 66
Query: 204 RPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQ-MVAKRGHYGAYLQDDWPLLTN 261
P+ +Q G+ + + EAA++ E IDIN+GCP + K G GA L L
Sbjct: 67 MPVAVQIFGSSPEKMAEAARIVEEAGASMIDINMGCPAPKIVKNGE-GAALMLKPELAEK 125
Query: 262 LVSSLRQAVQVPVSCKIRIYQDVN--KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLA 319
+V +++ AV VPVS KIR D N +E+A+ +E AG L+ VHGRT +Q +G A
Sbjct: 126 IVMAVKNAVSVPVSVKIRKGFDDNTVNAIEFAQRMEAAGADLITVHGRTREQ--FYSGKA 183
Query: 320 SWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
WE I V++A+ + V NG++ + L TGV VM + NP L
Sbjct: 184 DWEIIRRVKQAVKVKVAGNGDVDSPQKAKEMLELTGVDFVMIGRAVMGNPWL 235
>TIGR_CMR|SPO_2089 [details] [associations]
symbol:SPO_2089 "tRNA-dihydrouridine synthase, putative"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217855 Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
OMA:PIARKHI RefSeq:YP_167319.1 ProteinModelPortal:Q5LRN6
GeneID:3193240 KEGG:sil:SPO2089 PATRIC:23377519
ProtClustDB:CLSK2767269 Uniprot:Q5LRN6
Length = 327
Score = 284 (105.0 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 81/264 (30%), Positives = 128/264 (48%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKK-LRQEILMSTPEDRPL 206
+P ILAPM ++ P+R L +G+ + + MV++ + + K +R+ +S +
Sbjct: 11 APPVILAPMAGITDRPFRDLVMEFGAGMVVSEMVASQEMVQAKPGVRERAELSADVENTA 70
Query: 207 IIQFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSS 265
+ Q G D+ + EAA+ +A+ IDIN+GCP G+ G+ L L+ +
Sbjct: 71 V-QLAGRDTHWIAEAARQVADRGARVIDINMGCPAKKVTNGYSGSALLKTPDHALRLIEA 129
Query: 266 LRQAVQVPVSCKIRIYQD--VNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEH 323
+ AV VPV+ K R+ D + + AR AG +++ +HGRT Q G A W
Sbjct: 130 VVAAVDVPVTLKTRLGWDDTLMNAPDVARRAAEAGVRMVTIHGRTRCQ--FYKGRADWAA 187
Query: 324 ITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT-------GQT 376
I AVR+A+ +P+IANG+I C L ++G GVM G P L G
Sbjct: 188 IAAVREAVDVPLIANGDITCAHTARQALDRSGADGVMVGRGAQGRPWLLAQIAHALYGTP 247
Query: 377 RPAWELASEYLDLVAQ-YPVRLQY 399
P +E D+VA+ Y L +
Sbjct: 248 APEVPQGAELADMVARHYQAMLDF 271
>TIGR_CMR|ECH_0758 [details] [associations]
symbol:ECH_0758 "putative tRNA-dihydrouridine synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000236
GenomeReviews:CP000236_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 OMA:VTDQPFR
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 RefSeq:YP_507556.1
ProteinModelPortal:Q2GG77 STRING:Q2GG77 GeneID:3927061
KEGG:ech:ECH_0758 PATRIC:20576950 ProtClustDB:CLSK749467
BioCyc:ECHA205920:GJNR-761-MONOMER Uniprot:Q2GG77
Length = 317
Score = 280 (103.6 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 72/227 (31%), Positives = 115/227 (50%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
ILAPM ++ P+R L + G+ L + M+++ I K + L + +Q
Sbjct: 13 ILAPMSGVTDFPFRYLVKSLGAGLLVSEMIASRAMIIQTK---QSLQKSQIQINTAVQLA 69
Query: 212 GNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV 270
G D + +AAKL E IDIN GCP + G+ L D ++ S+ +AV
Sbjct: 70 GCDPTIMADAAKLNEDMGAQIIDINFGCPVKKVVNSYAGSALMKDETTAAKILESVVKAV 129
Query: 271 QVPVSCKIRIYQDVNK--TVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
++PV+ K+R D N + + A++ E G +++ +HGRT Q M TG A W+ I ++
Sbjct: 130 KIPVTLKMRTGWDNNNLNSPKLAKIAEETGIKMITIHGRTRTQ--MFTGKADWKFIRNIK 187
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQ 375
K + IPVI NG+I+ L D++ L ++ G+M G Y F Q
Sbjct: 188 KCVKIPVIVNGDIKNLNDIKTSLEESQADGIMIGRG-AYGKPWFINQ 233
>ZFIN|ZDB-GENE-100922-233 [details] [associations]
symbol:dus2l "dihydrouridine synthase 2-like, SMM1
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001159 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
ZFIN:ZDB-GENE-100922-233 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:54920 KO:K05543
GeneTree:ENSGT00550000075019 EMBL:CU855766 EMBL:CU855937
IPI:IPI00902127 RefSeq:XP_001342694.3 Ensembl:ENSDART00000110221
Ensembl:ENSDART00000139002 GeneID:100003049 KEGG:dre:100003049
NextBio:20785702 Uniprot:E7F220
Length = 504
Score = 293 (108.2 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 74/262 (28%), Positives = 131/262 (50%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS----TPEDRPL- 206
ILAPMV LP RLL+ YG+ + Y + + +++ ++L + P++R +
Sbjct: 20 ILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMAQCERVENDVLQTIDFVAPDERVMF 79
Query: 207 ----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 256
+ Q D + AKL E +D+N+GCP+ + +G G+ L D
Sbjct: 80 RTCSKESGRVVFQMGTADPERALAVAKLVENDVAAVDVNMGCPKEYSTKGGMGSALLSDP 139
Query: 257 PLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT 316
+ ++++L + + PV+CKIRI + TV + +E+ G +AVHGR D+R +
Sbjct: 140 EKIEAILTTLVKGISKPVTCKIRILSTIEDTVNLVKRIEKTGVAAIAVHGRMKDERPRHP 199
Query: 317 GLASWEHITAVRKALTIPVIANGN----IQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
++I AV +++++PVIANG ++ D+E TG + VM A ++NP++F
Sbjct: 200 --VHCDYIQAVAQSVSVPVIANGGSSDIVKEFEDIETFRESTGASSVMLARAAMWNPSVF 257
Query: 373 TGQ-TRPAWELASEYLDLVAQY 393
Q ++ EY+ +Y
Sbjct: 258 RQQGALSVDQVMQEYITYAVRY 279
>UNIPROTKB|E1C4F6 [details] [associations]
symbol:DUS2L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001159
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF00035 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:YHNKLIL
GeneTree:ENSGT00550000075019 EMBL:AADN02038196 IPI:IPI00588517
ProteinModelPortal:E1C4F6 Ensembl:ENSGALT00000005388 Uniprot:E1C4F6
Length = 493
Score = 288 (106.4 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 82/265 (30%), Positives = 133/265 (50%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRPL- 206
ILAPMV LP RLL+ YG+ + Y + + + K++ EIL + P +R +
Sbjct: 14 ILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMMQCKRVVNEILETVDFVAPNERVVF 73
Query: 207 ----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 256
I Q D+ AKL E GIDIN+GCP+ + +G GA L D
Sbjct: 74 RTCERERHRVIFQMGSADAGRALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDP 133
Query: 257 PLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTV---DQRG 313
+ +++++L + + PV+CKIRI V TV+ + +E+ G +AVHGR ++R
Sbjct: 134 DKIESILTTLVKGICKPVTCKIRILPSVEDTVDLVKRIEKTGIAAIAVHGRLERKKEERP 193
Query: 314 MNTGLASWEHITAVRKALTIPVIANGN----IQCLADVEACLAQTGVAGVMTAEGNLYNP 369
+ + I A+ +A++IPVIANG I+ D+E T + VM A ++NP
Sbjct: 194 QHP--VHCDVIKAISEAVSIPVIANGGSHDFIKEYGDIETFQKATAASSVMIARAAMWNP 251
Query: 370 ALFTGQTR-PAWELASEYLDLVAQY 393
++F + P ++ +Y+ +Y
Sbjct: 252 SIFRKEGPFPLRKVMQDYIKYAVRY 276
>UNIPROTKB|Q8EFG7 [details] [associations]
symbol:dusC "tRNA-dihydrouridine synthase C" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
PIRSF:PIRSF006621 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217854 KO:K05541
OMA:FYHVARI RefSeq:NP_717612.1 ProteinModelPortal:Q8EFG7
GeneID:1169758 KEGG:son:SO_2006 PATRIC:23523633
ProtClustDB:CLSK906542 Uniprot:Q8EFG7
Length = 315
Score = 268 (99.4 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 92/263 (34%), Positives = 127/263 (48%)
Query: 150 RFILAPMVDA-SELPWRLLSRRYGSHLCYTPMVSA-HQFIADK---KLRQEILMS--TPE 202
R ILAPM +L +LS L T V Q + +K KL E+L TP
Sbjct: 2 RVILAPMEGVVDDLMRDILSSINPYDLLVTEFVRVVDQLLPEKVFLKLCPELLSGGYTPS 61
Query: 203 DRPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTN 261
P+ +Q G + + E A A E G+D N GCP + R + GA L + +
Sbjct: 62 GTPVRVQLLGQEPNCMAENAMRAIELGSHGVDANFGCPAKMVNRSNGGAVLLQYPNTIHD 121
Query: 262 LVSSLRQAVQV--PVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRT-VDQRGMNTG 317
+V ++RQAV PV+ KIR+ Y+D + +E A + AG LA+H R+ VD G
Sbjct: 122 IVRAMRQAVPAEHPVTAKIRLGYEDKSLFMENALAVYEAGATELAIHARSKVD--GYKPP 179
Query: 318 LASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF----T 373
A WE+IT VR+ L IPVIANG I D + C+ TG +M G + P L T
Sbjct: 180 -AYWEYITEVRERLPIPVIANGEIWNRDDAKRCMQVTGCDSIMIGRGAISLPNLADTIKT 238
Query: 374 GQTRPAWELASEYLDLVAQYPVR 396
G T +W ++ L L+ Y R
Sbjct: 239 GATPYSW---ADTLQLMLSYTQR 258
>TIGR_CMR|SO_2006 [details] [associations]
symbol:SO_2006 "NifR3/Smm1 family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
PIRSF:PIRSF006621 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217854 KO:K05541
OMA:FYHVARI RefSeq:NP_717612.1 ProteinModelPortal:Q8EFG7
GeneID:1169758 KEGG:son:SO_2006 PATRIC:23523633
ProtClustDB:CLSK906542 Uniprot:Q8EFG7
Length = 315
Score = 268 (99.4 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 92/263 (34%), Positives = 127/263 (48%)
Query: 150 RFILAPMVDA-SELPWRLLSRRYGSHLCYTPMVSA-HQFIADK---KLRQEILMS--TPE 202
R ILAPM +L +LS L T V Q + +K KL E+L TP
Sbjct: 2 RVILAPMEGVVDDLMRDILSSINPYDLLVTEFVRVVDQLLPEKVFLKLCPELLSGGYTPS 61
Query: 203 DRPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTN 261
P+ +Q G + + E A A E G+D N GCP + R + GA L + +
Sbjct: 62 GTPVRVQLLGQEPNCMAENAMRAIELGSHGVDANFGCPAKMVNRSNGGAVLLQYPNTIHD 121
Query: 262 LVSSLRQAVQV--PVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRT-VDQRGMNTG 317
+V ++RQAV PV+ KIR+ Y+D + +E A + AG LA+H R+ VD G
Sbjct: 122 IVRAMRQAVPAEHPVTAKIRLGYEDKSLFMENALAVYEAGATELAIHARSKVD--GYKPP 179
Query: 318 LASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF----T 373
A WE+IT VR+ L IPVIANG I D + C+ TG +M G + P L T
Sbjct: 180 -AYWEYITEVRERLPIPVIANGEIWNRDDAKRCMQVTGCDSIMIGRGAISLPNLADTIKT 238
Query: 374 GQTRPAWELASEYLDLVAQYPVR 396
G T +W ++ L L+ Y R
Sbjct: 239 GATPYSW---ADTLQLMLSYTQR 258
>UNIPROTKB|Q8EJR8 [details] [associations]
symbol:dusB "tRNA-dihydrouridine synthase B" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855 KO:K05540
OMA:VTDQPFR Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
RefSeq:NP_716032.1 ProteinModelPortal:Q8EJR8 GeneID:1168271
KEGG:son:SO_0394 PATRIC:23520491 ProtClustDB:CLSK905725
Uniprot:Q8EJR8
Length = 322
Score = 265 (98.3 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 70/226 (30%), Positives = 122/226 (53%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
+ I+APM ++ +R L RYG+ L + M+S++ + D ++ + + E+ +Q
Sbjct: 11 QLIVAPMAGVTDQAFRNLCLRYGAALAVSEMLSSNPEVWDTDKSRQRMTHSGEEGIRSVQ 70
Query: 210 FCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQ 268
G D + + +AA+ E IDIN+GCP + G+ L + PL+ +++ ++
Sbjct: 71 IAGADPELMAQAAQFNVEQGAHIIDINMGCPAKKVNKKLAGSALMQNPPLVKDILQAVVA 130
Query: 269 AVQVPVSCKIRI-YQDVNKT-VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITA 326
AV VPV+ KIR ++ ++ V+ A++ E G LAVHGRT ++ M G A ++ I A
Sbjct: 131 AVDVPVTLKIRTGWEPEHRNGVQIAQIAEDCGIASLAVHGRT--RQCMYKGNAEYDTIKA 188
Query: 327 VRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
+++ ++IPV+ANG+I L TGV +M G P +F
Sbjct: 189 IKQNVSIPVVANGDIDSPEKARFVLDYTGVDALMIGRGAQGRPWIF 234
>TIGR_CMR|SO_0394 [details] [associations]
symbol:SO_0394 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001269 InterPro:IPR004652 InterPro:IPR013785
InterPro:IPR018517 InterPro:IPR024036 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855
KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
RefSeq:NP_716032.1 ProteinModelPortal:Q8EJR8 GeneID:1168271
KEGG:son:SO_0394 PATRIC:23520491 ProtClustDB:CLSK905725
Uniprot:Q8EJR8
Length = 322
Score = 265 (98.3 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 70/226 (30%), Positives = 122/226 (53%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
+ I+APM ++ +R L RYG+ L + M+S++ + D ++ + + E+ +Q
Sbjct: 11 QLIVAPMAGVTDQAFRNLCLRYGAALAVSEMLSSNPEVWDTDKSRQRMTHSGEEGIRSVQ 70
Query: 210 FCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQ 268
G D + + +AA+ E IDIN+GCP + G+ L + PL+ +++ ++
Sbjct: 71 IAGADPELMAQAAQFNVEQGAHIIDINMGCPAKKVNKKLAGSALMQNPPLVKDILQAVVA 130
Query: 269 AVQVPVSCKIRI-YQDVNKT-VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITA 326
AV VPV+ KIR ++ ++ V+ A++ E G LAVHGRT ++ M G A ++ I A
Sbjct: 131 AVDVPVTLKIRTGWEPEHRNGVQIAQIAEDCGIASLAVHGRT--RQCMYKGNAEYDTIKA 188
Query: 327 VRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
+++ ++IPV+ANG+I L TGV +M G P +F
Sbjct: 189 IKQNVSIPVVANGDIDSPEKARFVLDYTGVDALMIGRGAQGRPWIF 234
>FB|FBgn0030554 [details] [associations]
symbol:CG1434 species:7227 "Drosophila melanogaster"
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=ISS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207
PROSITE:PS01136 SMART:SM00358 InterPro:IPR014720 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE014298 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05543 GeneTree:ENSGT00550000075019 OMA:KEMIMHY
FlyBase:FBgn0030554 EMBL:BT031195 RefSeq:NP_572950.2 UniGene:Dm.163
SMR:Q9VY45 STRING:Q9VY45 EnsemblMetazoa:FBtr0073903 GeneID:32377
KEGG:dme:Dmel_CG1434 UCSC:CG1434-RA InParanoid:Q9VY45
GenomeRNAi:32377 NextBio:778177 Uniprot:Q9VY45
Length = 473
Score = 281 (104.0 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 80/264 (30%), Positives = 126/264 (47%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ G+ + YT + + I + L + P D
Sbjct: 25 KLILAPMVRVGTLPMRLLALEMGADIVYTEELVDIKLIKSIRRPNPALGTVDFVDPSDGT 84
Query: 206 LIIQFCGNDSKNL------TEAA------KLAEPHCDGIDINIGCPQMVAKRGHYGAYLQ 253
++ + C ++ L ++A KL + G+DIN+GCP+ + +G GA L
Sbjct: 85 IVFRTCAQETSRLVLQMGTSDAGRALAVGKLLQRDISGLDINMGCPKEFSIKGGMGAALL 144
Query: 254 DDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRG 313
D +++ +L + +PV+CKIRI DV T++ + L G + +H RT D+R
Sbjct: 145 ADPDKAAHILRTLCSGLDIPVTCKIRILPDVEGTIDLVQKLAATGIAAIGIHARTRDERP 204
Query: 314 MNTGLASWEHITAVRKALTIPVIANG---NIQCLADVEACLAQTGVAGVMTAEGNLYNPA 370
+ A E + AV +A+ IP+IANG N+ C D+ + G VM A N +
Sbjct: 205 QHP--AHPEVLRAVAQAVDIPIIANGGSKNMHCYDDLRKFQMECGADSVMVARAAQINVS 262
Query: 371 LFTGQ-TRPAWELASEYLDLVAQY 393
+F + P EL +YL L Y
Sbjct: 263 IFRPEGLLPMDELIEKYLRLCVDY 286
>DICTYBASE|DDB_G0283877 [details] [associations]
symbol:dus2l "tRNA-dihydrouridine synthase 2-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
dictyBase:DDB_G0283877 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000153_GR Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AAFI02000057 eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082
KO:K05543 RefSeq:XP_638879.1 ProteinModelPortal:Q54QJ2
EnsemblProtists:DDB0238070 GeneID:8624277 KEGG:ddi:DDB_G0283877
OMA:TMTKYVV ProtClustDB:CLSZ2430328 Uniprot:Q54QJ2
Length = 402
Score = 253 (94.1 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 72/276 (26%), Positives = 136/276 (49%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTP-MVSAHQF----IADKKLR--------QEILM 198
I+APMV P R+L+ YG + Y+ ++ + ++KL+ Q +
Sbjct: 35 IMAPMVRVGTYPMRILAYNYGCDIAYSEELIDLKLMKSTRVVNEKLKTIDFIAKDQTLCY 94
Query: 199 STPE-DRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP 257
T E D ++Q S EAAK+ +DIN+GCP+ + +G G+ L
Sbjct: 95 RTSEKDVRNVLQLGTASSMTALEAAKVVCNDICALDINMGCPKFFSVQGGMGSALLSKPE 154
Query: 258 LLTNLVSSLRQAVQ-VPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT 316
+ +++++L++ + +P++CKIR+ +T++ R++E G + VH R + +R +
Sbjct: 155 TIKDILTTLKRNLNGIPITCKIRLLSTDQETIDLLRIIESTGVSAIGVHCRMIPERPRDP 214
Query: 317 GLASWEHITAV--RKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG 374
A W+ + + + ++P+IANG+I AD+E QT V +M A G + N ++F+
Sbjct: 215 --AHWDRLENILSNASFSVPIIANGDIFEHADIEKIKKQTKVDSIMIARGVVKNVSIFSK 272
Query: 375 QTR-PAWELASEYLDLVAQY---PVRLQYARGHVFN 406
+ ++ EY ++ Q PV +Y + N
Sbjct: 273 PSPIDLKQIIQEYTEIAYQTNNSPVNTKYVINSMLN 308
Score = 59 (25.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYT 108
I+APMV P R+L+ YG + Y+
Sbjct: 35 IMAPMVRVGTYPMRILAYNYGCDIAYS 61
>WB|WBGene00013201 [details] [associations]
symbol:Y54E5A.6 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF00035 Pfam:PF01207
PROSITE:PS01136 SMART:SM00358 InterPro:IPR014720 Gene3D:3.20.20.70
GO:GO:0050660 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
EMBL:AL032643 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000195580 KO:K05543
GeneTree:ENSGT00550000075019 OMA:TMTKYVV PIR:T27160
RefSeq:NP_493554.1 UniGene:Cel.16372 ProteinModelPortal:Q9XWJ9
SMR:Q9XWJ9 PaxDb:Q9XWJ9 EnsemblMetazoa:Y54E5A.6 GeneID:173331
KEGG:cel:CELE_Y54E5A.6 UCSC:Y54E5A.6 CTD:173331 WormBase:Y54E5A.6
InParanoid:Q9XWJ9 NextBio:879203 Uniprot:Q9XWJ9
Length = 436
Score = 273 (101.2 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 80/261 (30%), Positives = 127/261 (48%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQE-------------ILM 198
ILAPMV A P RLL +YG+ LCYT + + I ++ E IL
Sbjct: 10 ILAPMVRAGRTPLRLLCLKYGADLCYTEEIVDKKLIEATRVVNEALGTIDYRNGDDIILR 69
Query: 199 STPEDRP-LIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP 257
PE++ I+Q N + + A++ GID+N+GCP+ + GA L
Sbjct: 70 LAPEEKGRCILQIGTNSGEKAAKIAQIVGDDVAGIDVNMGCPKPFSIHCGMGAALLTQTE 129
Query: 258 LLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG 317
+ ++++SL+ A +VPV+CKIR+ D T++ + +E+ L VHGR D+R +
Sbjct: 130 KIVDILTSLKSAAKVPVTCKIRVLDDPEDTLKLVQEIEKCRVSALGVHGRRRDERQPDK- 188
Query: 318 LASWEHITAVRKAL-TIPVIANG---NIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373
+ I V +A+ +IPVI+NG I+ +D E T + M A L P++F
Sbjct: 189 -CRIDEIRDVAQAVQSIPVISNGLSDEIEQYSDFEKYQLLTETSSTMIARKALSTPSIFR 247
Query: 374 GQ-TRPAWELASEYLDLVAQY 393
+ +E +L+L QY
Sbjct: 248 REGCLDKYEDIRNFLELACQY 268
>UNIPROTKB|P0ABT5 [details] [associations]
symbol:dusB "tRNA-dihydrouridine synthase B" species:83333
"Escherichia coli K-12" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;IMP] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA;IMP] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 eggNOG:COG0042 GO:GO:0017150
PANTHER:PTHR11082 EMBL:X62399 EMBL:M95784 EMBL:S67010 EMBL:J03816
EMBL:J03245 PIR:B47043 RefSeq:NP_417726.1 RefSeq:YP_491442.1
ProteinModelPortal:P0ABT5 SMR:P0ABT5 DIP:DIP-48240N IntAct:P0ABT5
EnsemblBacteria:EBESCT00000004917 EnsemblBacteria:EBESCT00000016888
GeneID:12932871 GeneID:947707 KEGG:ecj:Y75_p3178 KEGG:eco:b3260
PATRIC:32121950 EchoBASE:EB1287 EcoGene:EG11311
HOGENOM:HOG000217855 KO:K05540 OMA:VTDQPFR ProtClustDB:PRK10415
BioCyc:EcoCyc:EG11311-MONOMER BioCyc:ECOL316407:JW3228-MONOMER
BioCyc:MetaCyc:EG11311-MONOMER Genevestigator:P0ABT5
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 Uniprot:P0ABT5
Length = 321
Score = 249 (92.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 71/228 (31%), Positives = 115/228 (50%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFI--ADKKLRQEILMSTPEDRPLI 207
R I APM ++ P+R L G+ L + M+S++ + +DK + + + P R
Sbjct: 11 RLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVHIDEPGIRT-- 68
Query: 208 IQFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSL 266
+Q G+D K + +AA++ E IDIN+GCP R G+ L ++ ++++ +
Sbjct: 69 VQIAGSDPKEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPDVVKSILTEV 128
Query: 267 RQAVQVPVSCKIRI--YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHI 324
AV VPV+ KIR + E A++ E G Q L +HGRT + + G A ++ I
Sbjct: 129 VNAVDVPVTLKIRTGWAPEHRNCEEIAQLAEDCGIQALTIHGRT--RACLFNGEAEYDSI 186
Query: 325 TAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
AV++ ++IPVIANG+I A L TG +M P +F
Sbjct: 187 RAVKQKVSIPVIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIF 234
>UNIPROTKB|Q9KV66 [details] [associations]
symbol:dusB "tRNA-dihydrouridine synthase B" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE003852
GenomeReviews:AE003852_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05540 OMA:VTDQPFR
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 PIR:B82341
RefSeq:NP_229946.1 ProteinModelPortal:Q9KV66 DNASU:2615014
GeneID:2615014 KEGG:vch:VC0291 PATRIC:20079629
ProtClustDB:CLSK873929 Uniprot:Q9KV66
Length = 322
Score = 249 (92.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 71/224 (31%), Positives = 113/224 (50%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
I+APM ++ P+R L RYG+ + + M+S + + Q ++ E +Q
Sbjct: 13 IVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQIA 72
Query: 212 GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV 270
G+D + + EAA+ + E IDIN+GCP + G+ L ++ +++ ++ AV
Sbjct: 73 GSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVNAV 132
Query: 271 QVPVSCKIRIYQDV-NKT-VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
VPV+ K R D NK + A++ E G Q LA+HGRT + M G A ++ I AV+
Sbjct: 133 NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRT--RACMYKGEAEYDSIKAVK 190
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
A++IPVIANG+I L TG +M P +F
Sbjct: 191 AAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIF 234
>TIGR_CMR|VC_0291 [details] [associations]
symbol:VC_0291 "NifR3/Smm1 family protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
PIR:B82341 RefSeq:NP_229946.1 ProteinModelPortal:Q9KV66
DNASU:2615014 GeneID:2615014 KEGG:vch:VC0291 PATRIC:20079629
ProtClustDB:CLSK873929 Uniprot:Q9KV66
Length = 322
Score = 249 (92.7 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 71/224 (31%), Positives = 113/224 (50%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
I+APM ++ P+R L RYG+ + + M+S + + Q ++ E +Q
Sbjct: 13 IVAPMAGVTDRPFRELCLRYGAGMAVSEMMSCNPALWKTAKSQNRMVHEGESGIRSVQIA 72
Query: 212 GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV 270
G+D + + EAA+ + E IDIN+GCP + G+ L ++ +++ ++ AV
Sbjct: 73 GSDPQLMAEAAQFSVENGAQIIDINMGCPAKKVNKKLAGSALLRYPDVIEDILKAVVNAV 132
Query: 271 QVPVSCKIRIYQDV-NKT-VEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAVR 328
VPV+ K R D NK + A++ E G Q LA+HGRT + M G A ++ I AV+
Sbjct: 133 NVPVTLKTRTGWDTDNKNCLSIAQLAEDCGIQALALHGRT--RACMYKGEAEYDSIKAVK 190
Query: 329 KALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
A++IPVIANG+I L TG +M P +F
Sbjct: 191 AAVSIPVIANGDIDSPEKARYVLEYTGADALMIGRPAQGRPWIF 234
>UNIPROTKB|E1BGZ1 [details] [associations]
symbol:DUS3L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0008270 GO:GO:0003676 EMBL:DAAA02019576
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 CTD:56931
OMA:MSEWALL GeneTree:ENSGT00550000075134 IPI:IPI00715519
RefSeq:NP_001193247.1 UniGene:Bt.15641 ProteinModelPortal:E1BGZ1
Ensembl:ENSBTAT00000015715 GeneID:508812 KEGG:bta:508812
NextBio:20868690 Uniprot:E1BGZ1
Length = 650
Score = 268 (99.4 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 77/254 (30%), Positives = 124/254 (48%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLI 207
S + LAP+ LP+R + +R+G+ + M + + +L P +
Sbjct: 304 SGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQTSEWALLKRHPCEDIFG 363
Query: 208 IQFCGNDSKNLTEAAKLAEP--HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVS 264
+Q G +T+ A+L D +DIN+GCP +V K+G G L + +V
Sbjct: 364 VQLEGAFPDTMTKCAELLNRTIEVDFVDINVGCPIDLVFKKGG-GCALMNRLAKFQQIVR 422
Query: 265 SLRQAVQVPVSCKIR--IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWE 322
+ Q + VP++ K+R + + VN L G L+ +HGR+ +QR T LA W+
Sbjct: 423 GMNQVLDVPLTVKLRTGVQERVNLAHRLLPDLRDWGAALVTLHGRSREQR--YTKLADWQ 480
Query: 323 HIT-AVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAW 380
+I V A +P+ NG++ D L QTGVAGVM A G L P LFT + + W
Sbjct: 481 YIEQCVAAARPMPLFGNGDVLSYEDANRAL-QTGVAGVMIARGALLKPWLFTEIKEQRHW 539
Query: 381 ELAS-EYLDLVAQY 393
+++S E LD++ +
Sbjct: 540 DISSSERLDILRDF 553
>UNIPROTKB|F1SBU5 [details] [associations]
symbol:LOC100513458 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0008270 GO:GO:0003676 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 OMA:MSEWALL
GeneTree:ENSGT00550000075134 EMBL:CU928983 EMBL:FP089464
RefSeq:XP_003123132.1 RefSeq:XP_003123140.1 UniGene:Ssc.48250
UniGene:Ssc.82799 Ensembl:ENSSSCT00000014768
Ensembl:ENSSSCT00000014775 GeneID:100512091 GeneID:100513458
KEGG:ssc:100512091 KEGG:ssc:100513458 Uniprot:F1SBU5
Length = 652
Score = 265 (98.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 76/254 (29%), Positives = 124/254 (48%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLI 207
S + LAP+ LP+R + +R+G+ + M + + +L P +
Sbjct: 306 SGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQTSEWALLKRHPCEDVFG 365
Query: 208 IQFCGNDSKNLTEAAKLAEP--HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVS 264
+Q G +T+ A+L D +DIN+GCP +V K+G G L + +V
Sbjct: 366 VQLEGAFPDTMTKCAELLNRTIEVDFVDINVGCPIDLVYKKGG-GCALMNRSAKFQQIVR 424
Query: 265 SLRQAVQVPVSCKIR--IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWE 322
+ Q + VP++ KIR + + VN L G L+ +HGR+ +QR T LA W+
Sbjct: 425 GMNQVLDVPLTVKIRTGVQERVNLAHRLLPELRDWGAALVTLHGRSREQR--YTKLADWQ 482
Query: 323 HIT-AVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAW 380
+I V A +P+ NG+I D + +TGVAG+M A G L P LFT + + W
Sbjct: 483 YIEQCVTAASPMPLFGNGDILSYEDANRAM-KTGVAGIMIARGALLKPWLFTEIKEQRHW 541
Query: 381 ELAS-EYLDLVAQY 393
+++S E LD++ +
Sbjct: 542 DISSSERLDILRDF 555
>UNIPROTKB|Q487W0 [details] [associations]
symbol:CPS_0906 "tRNA-dihydrouridine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217854 KO:K05541
OMA:FYHVARI RefSeq:YP_267655.1 ProteinModelPortal:Q487W0
STRING:Q487W0 DNASU:3523360 GeneID:3523360 KEGG:cps:CPS_0906
PATRIC:21465097 BioCyc:CPSY167879:GI48-992-MONOMER Uniprot:Q487W0
Length = 310
Score = 242 (90.2 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 75/237 (31%), Positives = 110/237 (46%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSA-HQFIADKKLRQ---EILMS----- 199
R +LAPM + R L + GS+ LC T + Q + D+ + E++ +
Sbjct: 2 RVVLAPMEGVLDYRMRDLLTQVGSYDLCVTEFIRVVDQVLPDRVFHRYCPELIDADVYGS 61
Query: 200 -TPEDRPLIIQFCGNDSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP 257
T P+ +Q G + + E AAK+ E GID+N GCP + G+ L D
Sbjct: 62 CTKAGTPVRVQLLGQYPEYMAENAAKVIELGSSGIDLNFGCPSKTVNKSRGGSILLKDPE 121
Query: 258 LLTNLVSSLRQAV--QVPVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
L ++ ++++AV VS KIR+ Y+D +E + +E AG L +H RT G
Sbjct: 122 NLYQIIKAVKEAVPSDTIVSAKIRLGYEDKTLAIENGQAVEAAGANELTIHART-KLEGY 180
Query: 315 NTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
A W I V+ A+ IPVIANG I L D C +G +M G L P L
Sbjct: 181 KPP-AHWHWIAKVKNAINIPVIANGEIWNLEDAIKCREISGCTDLMVGRGALTIPNL 236
>TIGR_CMR|CPS_0906 [details] [associations]
symbol:CPS_0906 "NifR3/Smm1 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217854 KO:K05541 OMA:FYHVARI RefSeq:YP_267655.1
ProteinModelPortal:Q487W0 STRING:Q487W0 DNASU:3523360
GeneID:3523360 KEGG:cps:CPS_0906 PATRIC:21465097
BioCyc:CPSY167879:GI48-992-MONOMER Uniprot:Q487W0
Length = 310
Score = 242 (90.2 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 75/237 (31%), Positives = 110/237 (46%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSA-HQFIADKKLRQ---EILMS----- 199
R +LAPM + R L + GS+ LC T + Q + D+ + E++ +
Sbjct: 2 RVVLAPMEGVLDYRMRDLLTQVGSYDLCVTEFIRVVDQVLPDRVFHRYCPELIDADVYGS 61
Query: 200 -TPEDRPLIIQFCGNDSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP 257
T P+ +Q G + + E AAK+ E GID+N GCP + G+ L D
Sbjct: 62 CTKAGTPVRVQLLGQYPEYMAENAAKVIELGSSGIDLNFGCPSKTVNKSRGGSILLKDPE 121
Query: 258 LLTNLVSSLRQAV--QVPVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
L ++ ++++AV VS KIR+ Y+D +E + +E AG L +H RT G
Sbjct: 122 NLYQIIKAVKEAVPSDTIVSAKIRLGYEDKTLAIENGQAVEAAGANELTIHART-KLEGY 180
Query: 315 NTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
A W I V+ A+ IPVIANG I L D C +G +M G L P L
Sbjct: 181 KPP-AHWHWIAKVKNAINIPVIANGEIWNLEDAIKCREISGCTDLMVGRGALTIPNL 236
>RGD|1563228 [details] [associations]
symbol:Dus3l "dihydrouridine synthase 3-like (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
RGD:1563228 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05544 CTD:56931 HOVERGEN:HBG062413
EMBL:BC105780 IPI:IPI00373725 RefSeq:NP_001030095.1
UniGene:Rn.42187 ProteinModelPortal:Q3KRC5 PhosphoSite:Q3KRC5
PRIDE:Q3KRC5 GeneID:301122 KEGG:rno:301122 NextBio:648195
Genevestigator:Q3KRC5 Uniprot:Q3KRC5
Length = 640
Score = 263 (97.6 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 75/254 (29%), Positives = 123/254 (48%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLI 207
S + LAP+ LP+R + +R+G+ + M + + +L P +
Sbjct: 294 SGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAMCTNLLQGQMSEWALLKRHPCEDIFG 353
Query: 208 IQFCGNDSKNLTEAAKLAEP--HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVS 264
+Q G +T+ A+L D +DIN+GCP +V K+G G L + +V
Sbjct: 354 VQLEGAFPDTMTKCAELLNRTIDVDFVDINVGCPIDLVYKKGG-GCALMNRSAKFQQIVR 412
Query: 265 SLRQAVQVPVSCKIR--IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWE 322
+ + + VP++ K+R + + V+ L G L+ +HGR+ +QR T LA W
Sbjct: 413 GMNEVLDVPLTVKMRTGVQERVSLAHRLLPELRNWGVALVTLHGRSREQR--YTRLADWP 470
Query: 323 HITAVRK-ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAW 380
+I K A +P+ NG+I D C QTGVAG+M A G L P LFT + + W
Sbjct: 471 YIEQCAKVASPMPLFGNGDILSFEDAN-CAMQTGVAGIMVARGALLKPWLFTEIKEQRHW 529
Query: 381 ELAS-EYLDLVAQY 393
+++S E LD++ +
Sbjct: 530 DISSSERLDILRDF 543
>UNIPROTKB|E7EUN9 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001159 InterPro:IPR001269
InterPro:IPR013785 Pfam:PF00035 Pfam:PF01207 SMART:SM00358
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0050660
Gene3D:3.30.160.20 GO:GO:0003725 EMBL:AC130462 EMBL:AC040162
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 GeneID:54920
HGNC:HGNC:26014 IPI:IPI00909876 RefSeq:NP_001258692.1
ProteinModelPortal:E7EUN9 SMR:E7EUN9 Ensembl:ENST00000432752
UCSC:uc010vkk.2 ArrayExpress:E7EUN9 Bgee:E7EUN9 Uniprot:E7EUN9
Length = 458
Score = 219 (82.2 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 60/189 (31%), Positives = 96/189 (50%)
Query: 240 QMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGC 299
++V + G GA L D + ++S+L + + PV+CKIRI + T+ + +ER G
Sbjct: 83 RVVFQMGGMGAALLSDPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGI 142
Query: 300 QLLAVHGRTVDQRGMNTGLASWEHITAVRKALTIPVIANG----NIQCLADVEACLAQTG 355
+AVHGR ++R + S E I A+ L+IPVIANG +IQ +D+E T
Sbjct: 143 AAIAVHGRKREERPQHP--VSCEVIKAIADTLSIPVIANGGSHDHIQQYSDIEDFRQATA 200
Query: 356 VAGVMTAEGNLYNPALFTGQ-TRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTL 414
+ VM A ++NP++F + RP E+ +Y+ QY + + +C L
Sbjct: 201 ASSVMVARAAMWNPSIFLKEGLRPLEEVMQKYIRYAVQYDNHYTNTK---YCLCQMLREQ 257
Query: 415 PENSDVRLL 423
E+ RLL
Sbjct: 258 LESPQGRLL 266
Score = 85 (35.0 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + I K++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDR- 71
Query: 206 LIIQFCGNDSKNL 218
++ + C + +
Sbjct: 72 VVFRTCEREQNRV 84
Score = 83 (34.3 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 80 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 135
+ ILAPMV LP RLL+ YG+ + Y + + I K++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDR- 71
Query: 136 LIIQRT 141
++ RT
Sbjct: 72 -VVFRT 76
>TIGR_CMR|CJE_0118 [details] [associations]
symbol:CJE_0118 "tRNA-dihydrouridine synthase B"
species:195099 "Campylobacter jejuni RM1221" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217855 KO:K05540 Gene3D:1.10.1200.80 OMA:ECAKEHL
RefSeq:YP_178142.1 ProteinModelPortal:Q5HX43 STRING:Q5HX43
GeneID:3230881 KEGG:cjr:CJE0118 PATRIC:20041943
ProtClustDB:CLSK872423 BioCyc:CJEJ195099:GJC0-122-MONOMER
Uniprot:Q5HX43
Length = 308
Score = 240 (89.5 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 63/227 (27%), Positives = 115/227 (50%)
Query: 149 PRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLII 208
P F LAPM S+LP+R + +++G+ + + M+S++ + + +L + P I+
Sbjct: 8 PLF-LAPMAGFSDLPFRNVVKKFGADITISEMISSNALVYESSKTLHMLERAELENPYIV 66
Query: 209 QFCGNDSKNLTEAAKLAEP--HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSL 266
Q G D + L +A ++ DGID N GCP + G+ L ++ L NLV +
Sbjct: 67 QIAGGDKEVLKKAVQMLNEMDFVDGIDFNCGCPVNKVVKQCAGSALLENLELFKNLVGVI 126
Query: 267 RQAVQVPV-SCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHIT 325
++ + + S K R+ + + A++ E G +++HGRT Q + +G A + I
Sbjct: 127 KENNKKSLTSVKFRLGFNEKYPEKMAKICESLGVDFISIHGRTRKQ--LYSGKADYGSIA 184
Query: 326 AVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
+ + ++ IPVIANG+I + + T G+M ++ NP +F
Sbjct: 185 SAKASVKIPVIANGDINA-QNAKEVYKITKCDGLMIGRASVGNPWIF 230
>UNIPROTKB|Q96G46 [details] [associations]
symbol:DUS3L "tRNA-dihydrouridine(47) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50103 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:AC011499 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544
EMBL:AK023958 EMBL:BC004549 EMBL:BC008362 EMBL:BC009973
EMBL:AL365411 IPI:IPI00186125 IPI:IPI00640947 IPI:IPI00784107
RefSeq:NP_001155091.1 RefSeq:NP_064560.2 UniGene:Hs.284297
ProteinModelPortal:Q96G46 SMR:Q96G46 IntAct:Q96G46 STRING:Q96G46
PhosphoSite:Q96G46 DMDM:110808212 PaxDb:Q96G46 PRIDE:Q96G46
DNASU:56931 Ensembl:ENST00000309061 Ensembl:ENST00000320699
GeneID:56931 KEGG:hsa:56931 UCSC:uc002mdc.3 UCSC:uc002mdd.3
CTD:56931 GeneCards:GC19M005737 HGNC:HGNC:26920 HPA:HPA041854
HPA:HPA041944 neXtProt:NX_Q96G46 PharmGKB:PA142671938
HOGENOM:HOG000240610 HOVERGEN:HBG062413 InParanoid:Q96G46
OMA:MSEWALL OrthoDB:EOG4K6G43 GenomeRNAi:56931 NextBio:62471
ArrayExpress:Q96G46 Bgee:Q96G46 CleanEx:HS_DUS3L
Genevestigator:Q96G46 GermOnline:ENSG00000141994 Uniprot:Q96G46
Length = 650
Score = 256 (95.2 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 74/252 (29%), Positives = 122/252 (48%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
+ LAP+ LP+R + +R+G+ + M + + +L + +Q
Sbjct: 306 KLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHQCEDIFGVQ 365
Query: 210 FCGNDSKNLTEAAKLAEP--HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVSSL 266
G +T+ A+L D +DIN+GCP +V K+G G L + +V +
Sbjct: 366 LEGAFPDTMTKCAELLSRTVEVDFVDINVGCPIDLVYKKGG-GCALMNRSTKFQQIVRGM 424
Query: 267 RQAVQVPVSCKIR--IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHI 324
Q + VP++ KIR + + VN L G L+ +HGR+ +QR T LA W++I
Sbjct: 425 NQVLDVPLTVKIRTGVQERVNLAHRLLPELRDWGVALVTLHGRSREQR--YTKLADWQYI 482
Query: 325 T-AVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAWEL 382
V+ A +P+ NG+I D + QTGV G+M A G L P LFT + + W++
Sbjct: 483 EECVQAASPMPLFGNGDILSFEDANRAM-QTGVTGIMIARGALLKPWLFTEIKEQRHWDI 541
Query: 383 AS-EYLDLVAQY 393
+S E LD++ +
Sbjct: 542 SSSERLDILRDF 553
Score = 50 (22.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 80 RFILAPMVDASELPWRLLSRRYGS 103
+ LAP+ LP+R + +R+G+
Sbjct: 306 KLYLAPLTTCGNLPFRRICKRFGA 329
>UNIPROTKB|F1PS34 [details] [associations]
symbol:LOC100856098 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0008270 GO:GO:0003676
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 OMA:MSEWALL
GeneTree:ENSGT00550000075134 EMBL:AAEX03012510
RefSeq:XP_003639789.1 Ensembl:ENSCAFT00000029778 GeneID:100856098
KEGG:cfa:100856098 Uniprot:F1PS34
Length = 645
Score = 262 (97.3 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 76/252 (30%), Positives = 122/252 (48%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
+ LAP+ LP+R + +R+G+ + M + + +L P + +Q
Sbjct: 301 KLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQTSEWALLRRHPCEDVFGVQ 360
Query: 210 FCGNDSKNLTEAAKLAEP--HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVSSL 266
G +T+ A+L D +DIN+GCP +V K+G G L + +V +
Sbjct: 361 LEGAFPDTMTKCAELLNRTIEVDFVDINVGCPIDLVYKKGG-GCALMNRSAKFQQIVRGM 419
Query: 267 RQAVQVPVSCKIR--IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHI 324
Q + VP++ KIR + + VN L G L+ +HGR+ +QR T LA W++I
Sbjct: 420 NQVLDVPLTVKIRTGVQERVNLAHRLLPELREWGAALVTLHGRSREQR--YTKLADWQYI 477
Query: 325 T-AVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAWEL 382
V A +P+ NG+I D + QTGVAGVM A G L P LFT + + W++
Sbjct: 478 EQCVTAASPMPLFGNGDILSYEDANRAM-QTGVAGVMIARGALLKPWLFTEIKEQRHWDI 536
Query: 383 AS-EYLDLVAQY 393
+S E L ++ +
Sbjct: 537 SSSERLAILQDF 548
>UNIPROTKB|Q9KT00 [details] [associations]
symbol:dusC "tRNA-dihydrouridine synthase C" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05541 OMA:FYHVARI PIR:D82241 RefSeq:NP_230750.1
ProteinModelPortal:Q9KT00 DNASU:2614375 GeneID:2614375
KEGG:vch:VC1105 PATRIC:20081304 ProtClustDB:CLSK874217
Uniprot:Q9KT00
Length = 323
Score = 239 (89.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 74/233 (31%), Positives = 107/233 (45%)
Query: 150 RFILAPMVDASELPWR-LLSRRYGSHLCYTPMVSA-HQFIADK---KLRQEILMS--TPE 202
R IL PM + R +L++ C T V + + D +L E+ TP
Sbjct: 2 RVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPS 61
Query: 203 DRPLIIQFCGNDSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTN 261
P+ +Q G D + E A + AE GID+N GCP + + GA L L+
Sbjct: 62 GVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQ 121
Query: 262 LVSSLRQAV--QVPVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL 318
+V + R AV +PVS KIR+ ++D E + +A L VH RT G
Sbjct: 122 VVKACRDAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHART-KAGGYKASE 180
Query: 319 ASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
W +I +R+ +IP+IANG + AD +AC+ TGV +M G L P L
Sbjct: 181 IKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNL 233
>TIGR_CMR|VC_1105 [details] [associations]
symbol:VC_1105 "conserved hypothetical protein" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05541 OMA:FYHVARI
PIR:D82241 RefSeq:NP_230750.1 ProteinModelPortal:Q9KT00
DNASU:2614375 GeneID:2614375 KEGG:vch:VC1105 PATRIC:20081304
ProtClustDB:CLSK874217 Uniprot:Q9KT00
Length = 323
Score = 239 (89.2 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 74/233 (31%), Positives = 107/233 (45%)
Query: 150 RFILAPMVDASELPWR-LLSRRYGSHLCYTPMVSA-HQFIADK---KLRQEILMS--TPE 202
R IL PM + R +L++ C T V + + D +L E+ TP
Sbjct: 2 RVILGPMEGVLDHLMRDMLTQINDYDFCVTEFVRVVNLLLPDHVFYRLCPELQQGSKTPS 61
Query: 203 DRPLIIQFCGNDSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTN 261
P+ +Q G D + E A + AE GID+N GCP + + GA L L+
Sbjct: 62 GVPVKVQLLGQDPHWMAENAIRAAELGAYGIDLNFGCPAKMVNQSKGGAALLQHPELIYQ 121
Query: 262 LVSSLRQAV--QVPVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL 318
+V + R AV +PVS KIR+ ++D E + +A L VH RT G
Sbjct: 122 VVKACRDAVPAHIPVSAKIRLGWEDPEDCFEIVDAVAQAKADELTVHART-KAGGYKASE 180
Query: 319 ASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
W +I +R+ +IP+IANG + AD +AC+ TGV +M G L P L
Sbjct: 181 IKWHYIDQIRQKCSIPLIANGEVWNYADGQACIQTTGVDSLMVCRGALNVPNL 233
>UNIPROTKB|J3QLD5 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AC130462 EMBL:AC040162 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HGNC:HGNC:26014
Ensembl:ENST00000562246 Uniprot:J3QLD5
Length = 208
Score = 236 (88.1 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 62/198 (31%), Positives = 101/198 (51%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + I K++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
+ + Q +D++ A+L E GID+N+GCP+ + +G GA L
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGM 314
D + ++S+L + + PV+CKIRI + T+ + +ER G +AVHGR ++R
Sbjct: 133 DPDKIEKILSTLVKGTRRPVTCKIRILPSLEDTLSLVKRIERTGIAAIAVHGRKREERPQ 192
Query: 315 NTGLASWEHITAVRKALT 332
+ S E I A+ L+
Sbjct: 193 HP--VSCEVIKAIADTLS 208
>UNIPROTKB|P33371 [details] [associations]
symbol:dusC "tRNA-dihydrouridine synthase C" species:83333
"Escherichia coli K-12" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;IMP] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA;IMP] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U00007
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 PIR:C64982
RefSeq:NP_416645.1 RefSeq:YP_490379.1 ProteinModelPortal:P33371
SMR:P33371 DIP:DIP-12808N IntAct:P33371 PRIDE:P33371
EnsemblBacteria:EBESCT00000002162 EnsemblBacteria:EBESCT00000017846
GeneID:12931463 GeneID:945458 KEGG:ecj:Y75_p2102 KEGG:eco:b2140
PATRIC:32119623 EchoBASE:EB1957 EcoGene:EG12022
HOGENOM:HOG000217854 KO:K05541 OMA:FYHVARI ProtClustDB:PRK10550
BioCyc:EcoCyc:EG12022-MONOMER BioCyc:ECOL316407:JW2128-MONOMER
BioCyc:MetaCyc:EG12022-MONOMER Genevestigator:P33371 Uniprot:P33371
Length = 315
Score = 234 (87.4 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 78/233 (33%), Positives = 107/233 (45%)
Query: 150 RFILAPMVDASE-LPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEI---LMS---TPE 202
R +LAPM + L LL+ LC T V + K+ I L + TP
Sbjct: 2 RVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPS 61
Query: 203 DRPLIIQFCGNDSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTN 261
+ +Q G + L E AA+ E G+D+N GCP GA L D L+
Sbjct: 62 GTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQ 121
Query: 262 LVSSLRQAV--QVPVSCKIRIYQDVN-KTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL 318
++R+AV +PVS K+R+ D K E A +++AG L VHGRT +Q G
Sbjct: 122 GAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQ-GYRAEH 180
Query: 319 ASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
W+ I +R+ L IPVIANG I + C+A +G VM G L P L
Sbjct: 181 IDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNL 233
>MGI|MGI:2147092 [details] [associations]
symbol:Dus3l "dihydrouridine synthase 3-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
MGI:MGI:2147092 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 KO:K05544 CTD:56931
HOGENOM:HOG000240610 HOVERGEN:HBG062413 OrthoDB:EOG4K6G43
EMBL:AY040840 EMBL:AK157702 EMBL:BC052481 IPI:IPI00129184
IPI:IPI00776080 RefSeq:NP_659107.2 UniGene:Mm.293973
ProteinModelPortal:Q91XI1 SMR:Q91XI1 STRING:Q91XI1
PhosphoSite:Q91XI1 PaxDb:Q91XI1 PRIDE:Q91XI1
Ensembl:ENSMUST00000007747 GeneID:224907 KEGG:mmu:224907
UCSC:uc008ddd.2 GeneTree:ENSGT00550000075134 InParanoid:Q91XI1
NextBio:377458 Bgee:Q91XI1 CleanEx:MM_DUS3L Genevestigator:Q91XI1
GermOnline:ENSMUSG00000007603 Uniprot:Q91XI1
Length = 637
Score = 256 (95.2 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 78/256 (30%), Positives = 124/256 (48%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLI 207
S + LAP+ LP+R + +R+G+ + M + + +L P +
Sbjct: 291 SGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQMSEWALLKRHPCEDIFG 350
Query: 208 IQFCGNDSKNLTEAAKLAEP--HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVS 264
+Q G +T+ A+L D +DIN+GCP +V K+G G L + +V
Sbjct: 351 VQLEGAFPDTMTKCAELLNRTIDVDFVDINVGCPIDLVYKKGG-GCALMNRSAKFQQIVR 409
Query: 265 SLRQAVQVPVSCKIRIYQDVNKTVEYA-RMLERA---GCQLLAVHGRTVDQRGMNTGLAS 320
+ + VP++ K+R V + V A R+L G L+ +HGR+ +QR T LA
Sbjct: 410 GVNGVLDVPLTVKMRT--GVQERVSLAHRLLPELRDWGVALVTLHGRSREQR--YTRLAD 465
Query: 321 WEHITAVRK-ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRP 378
W +I K A +P+ NG+I D C QTGVAG+M A G L P LFT + +
Sbjct: 466 WPYIEQCAKVASPMPLFGNGDILSFEDAN-CAMQTGVAGIMVARGALLKPWLFTEIKEQR 524
Query: 379 AWELAS-EYLDLVAQY 393
W+++S E LD++ +
Sbjct: 525 HWDISSSERLDILRDF 540
>UNIPROTKB|Q489F6 [details] [associations]
symbol:CPS_0550 "tRNA-dihydrouridine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004652
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CP000083 GenomeReviews:CP000083_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000217855 KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80
TIGRFAMs:TIGR00737 RefSeq:YP_267308.1 ProteinModelPortal:Q489F6
STRING:Q489F6 GeneID:3522222 KEGG:cps:CPS_0550 PATRIC:21464439
BioCyc:CPSY167879:GI48-645-MONOMER Uniprot:Q489F6
Length = 338
Score = 240 (89.5 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 78/263 (29%), Positives = 128/263 (48%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPL-IIQF 210
+LAPM ++ P+R L + G+ L + M+S++ + + + + ++ M + + +Q
Sbjct: 13 MLAPMAGITDQPFRQLCCQLGAGLAVSEMLSSNPKVWNTE-KSKLRMLHGDAAGIRSVQI 71
Query: 211 CGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA 269
G+ L AAK+ A+ IDIN+GCP + G+ L + + +V S+ A
Sbjct: 72 AGSCPDELAFAAKVNADNGAQIIDINMGCPAKKVNKKLAGSALLREPAQVERIVQSVVNA 131
Query: 270 VQVPVSCKIRI--YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAV 327
V +PV+ KIR +D +E A++ E +G LAVHGRT + G A ++ I A+
Sbjct: 132 VDIPVTLKIRTGWCEDTRNGIEIAKIAENSGIASLAVHGRT--RNDFYKGNAEYDTIKAI 189
Query: 328 RKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF--------TGQTRPA 379
+ A++IPV+ANG+I L TG +M G P +F TG A
Sbjct: 190 KLAISIPVVANGDITSPEKALQVLDHTGADAIMVGRGAQGRPWIFREINYFLATGNKMSA 249
Query: 380 WELASEYLDLVAQYPVRLQYARG 402
EL SE +V + + L G
Sbjct: 250 PEL-SEVRSIVLAHVMELHQFYG 271
>TIGR_CMR|CPS_0550 [details] [associations]
symbol:CPS_0550 "NifR3/Smm1 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR004652 InterPro:IPR013785
InterPro:IPR018517 InterPro:IPR024036 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217855
KO:K05540 OMA:VTDQPFR Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737
RefSeq:YP_267308.1 ProteinModelPortal:Q489F6 STRING:Q489F6
GeneID:3522222 KEGG:cps:CPS_0550 PATRIC:21464439
BioCyc:CPSY167879:GI48-645-MONOMER Uniprot:Q489F6
Length = 338
Score = 240 (89.5 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 78/263 (29%), Positives = 128/263 (48%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPL-IIQF 210
+LAPM ++ P+R L + G+ L + M+S++ + + + + ++ M + + +Q
Sbjct: 13 MLAPMAGITDQPFRQLCCQLGAGLAVSEMLSSNPKVWNTE-KSKLRMLHGDAAGIRSVQI 71
Query: 211 CGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQA 269
G+ L AAK+ A+ IDIN+GCP + G+ L + + +V S+ A
Sbjct: 72 AGSCPDELAFAAKVNADNGAQIIDINMGCPAKKVNKKLAGSALLREPAQVERIVQSVVNA 131
Query: 270 VQVPVSCKIRI--YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHITAV 327
V +PV+ KIR +D +E A++ E +G LAVHGRT + G A ++ I A+
Sbjct: 132 VDIPVTLKIRTGWCEDTRNGIEIAKIAENSGIASLAVHGRT--RNDFYKGNAEYDTIKAI 189
Query: 328 RKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF--------TGQTRPA 379
+ A++IPV+ANG+I L TG +M G P +F TG A
Sbjct: 190 KLAISIPVVANGDITSPEKALQVLDHTGADAIMVGRGAQGRPWIFREINYFLATGNKMSA 249
Query: 380 WELASEYLDLVAQYPVRLQYARG 402
EL SE +V + + L G
Sbjct: 250 PEL-SEVRSIVLAHVMELHQFYG 271
>UNIPROTKB|F1NGP4 [details] [associations]
symbol:DUS3L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0008270 GO:GO:0003676 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 OMA:MSEWALL
GeneTree:ENSGT00550000075134 EMBL:AADN02072212 IPI:IPI00581852
Ensembl:ENSGALT00000002780 Uniprot:F1NGP4
Length = 630
Score = 243 (90.6 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 68/252 (26%), Positives = 120/252 (47%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
+ LAP+ LP+R + +R+G+ + M + + +L + +Q
Sbjct: 286 KLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQSSEWALLKRHHTEDIFGVQ 345
Query: 210 FCGNDSKNLTEAAKLAEP--HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVSSL 266
G +T+ A+L D +DIN+GCP +V K+G G L +V +
Sbjct: 346 LEGAFPDTMTKCAELLNQTIDVDFVDINVGCPIDLVYKKGG-GCALMTRSNKFEQIVRGM 404
Query: 267 RQAVQVPVSCKIR--IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHI 324
+ VP++ KIR + + +N + + G ++ +HGR+ +QR T +A W++I
Sbjct: 405 NSVLDVPLTVKIRTGVQEKMNVAHKIIPKIREWGASMVTLHGRSREQR--YTRVADWDYI 462
Query: 325 TAVRK-ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAWEL 382
K A +P+ NG+I D + QTGV+G+M A G L P LFT + + W++
Sbjct: 463 AECAKIASPMPLFGNGDILSYEDANQAM-QTGVSGIMIARGALIKPWLFTEIKEQRHWDI 521
Query: 383 AS-EYLDLVAQY 393
+S E D++ +
Sbjct: 522 SSSERFDILRDF 533
Score = 50 (22.7 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 80 RFILAPMVDASELPWRLLSRRYGS 103
+ LAP+ LP+R + +R+G+
Sbjct: 286 KLYLAPLTTCGNLPFRRICKRFGA 309
>ZFIN|ZDB-GENE-040426-1260 [details] [associations]
symbol:dus3l "dihydrouridine synthase 3-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
ZFIN:ZDB-GENE-040426-1260 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0008270 GO:GO:0003676 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05544 CTD:56931 HOGENOM:HOG000240610
HOVERGEN:HBG062413 EMBL:BC058066 IPI:IPI00486931 RefSeq:NP_956968.1
UniGene:Dr.81366 ProteinModelPortal:Q6PEH0 STRING:Q6PEH0
GeneID:393647 KEGG:dre:393647 InParanoid:Q6PEH0 NextBio:20814655
ArrayExpress:Q6PEH0 Uniprot:Q6PEH0
Length = 660
Score = 249 (92.7 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 71/252 (28%), Positives = 121/252 (48%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
+ LAP+ LP+R + +R+G+ + M + + +L + +Q
Sbjct: 316 KLYLAPLTTCGNLPFRRVCKRFGADITCGEMAMCTNLLQGQASEWALLKRHASEDLFGVQ 375
Query: 210 FCGNDSKNLTEAAKLAEPHCDG--IDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVSSL 266
G +T A+L + D +DIN GCP +V K+G G L +V +
Sbjct: 376 LEGCFPDTMTRCAELLNQNIDVDFVDINSGCPIDLVYKKGG-GCGLMTRTSKFEQIVRGM 434
Query: 267 RQAVQVPVSCKIR--IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHI 324
+ VP++ KIR + Q+ N + +++ G L+ +HGR+ +QR T LA W++I
Sbjct: 435 NSVLDVPLTVKIRTGVQQNSNIAHKLIPEMKKWGVSLITLHGRSREQR--YTKLADWDYI 492
Query: 325 -TAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAWEL 382
T + A +P+ NG+I D +TGV+G+M A G L P LFT + W++
Sbjct: 493 NTCAQLAAPVPLFGNGDILSYEDAMKA-RETGVSGIMVARGALIKPWLFTEIKESRHWDI 551
Query: 383 AS-EYLDLVAQY 393
+S E LD++ +
Sbjct: 552 SSTERLDILRDF 563
>UNIPROTKB|O53835 [details] [associations]
symbol:dus "Probable tRNA-dihydrouridine synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0019217 "regulation
of fatty acid metabolic process" evidence=IDA] InterPro:IPR001269
InterPro:IPR004652 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0050660 GO:GO:0019217 EMBL:BX842574
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
Gene3D:1.10.1200.80 TIGRFAMs:TIGR00737 PIR:G70810
RefSeq:NP_215338.1 RefSeq:NP_335273.1 RefSeq:YP_006514173.1
ProteinModelPortal:O53835 SMR:O53835
EnsemblBacteria:EBMYCT00000002102 EnsemblBacteria:EBMYCT00000070313
GeneID:13318720 GeneID:885380 GeneID:926148 KEGG:mtc:MT0845
KEGG:mtu:Rv0823c KEGG:mtv:RVBD_0823c PATRIC:18123594
TubercuList:Rv0823c HOGENOM:HOG000217856 OMA:PIARKHI
ProtClustDB:CLSK871859 Uniprot:O53835
Length = 389
Score = 239 (89.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 84/271 (30%), Positives = 126/271 (46%)
Query: 146 LGSPRFILAPMVDASELPWRLLSR-----RYG--SHLCYTPMVSAHQFIADKKLRQEILM 198
L SP +LAPM + + +R L R + G S L MV+A I + +
Sbjct: 20 LASP-VVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTT 78
Query: 199 STPEDRPLIIQFCGNDSKNLTEAAKL--AEPHCDGIDINIGCP-QMVAKRGHYGAYLQDD 255
+ ++ P +Q D AA++ E D ID+N GCP V KRG GA L
Sbjct: 79 FSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGG-GAALPFK 137
Query: 256 WPLLTNLVSSLRQAVQ---VPVSCKIRI-YQDVNKT-VEYARMLERAGCQLLAVHGRTVD 310
L +V++ +A + +PV+ K RI D + T ++ R+ E G +A+H RT
Sbjct: 138 RRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAA 197
Query: 311 QRGMNTGLASWEHITAVRKAL-TIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369
QR +G A WE I +++ + TIPV+ NG+I D A ++ TG GV+ G L P
Sbjct: 198 QR--YSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRP 255
Query: 370 -------ALFTGQTRPAWELASEYLDLVAQY 393
A FTG P E D++ ++
Sbjct: 256 WLFAELSAAFTGSPAPTPPTLGEVADIIRRH 286
>UNIPROTKB|Q83D40 [details] [associations]
symbol:CBU_0904 "tRNA-dihydrouridine synthase"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539 OMA:IPPLDYD
ProtClustDB:PRK11815 TIGRFAMs:TIGR00742 RefSeq:NP_819919.1
ProteinModelPortal:Q83D40 PRIDE:Q83D40 GeneID:1208797
KEGG:cbu:CBU_0904 PATRIC:17930509
BioCyc:CBUR227377:GJ7S-895-MONOMER Uniprot:Q83D40
Length = 353
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 75/264 (28%), Positives = 129/264 (48%)
Query: 136 LIIQRTIFPRLGSPRFI-LAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLR 193
L IQ I+ RL R I +APM+ ++ +R+ R+ H L YT MV+ + K+ R
Sbjct: 15 LKIQSIIYNRLMLNRRISIAPMMGCTDRHFRMFMRQISRHVLLYTEMVTTGALLKGKQWR 74
Query: 194 QEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYL 252
L +PE+ PL +Q G+D ++L A+LAE D I++N+GCP G +GA L
Sbjct: 75 --CLDYSPEEHPLALQVGGSDPQSLALCARLAEEKGFDEINLNVGCPSGRVIAGRFGACL 132
Query: 253 QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVE----YARMLERAGCQLLAVHGRT 308
+ L+ + V+++ V +PVS K R D + E + + + AGC++ +H R
Sbjct: 133 LKEAELVADCVAAMSAEVNIPVSVKTRTGVDDQDSYEHLYHFVKTVAEAGCRIFIIHARK 192
Query: 309 VDQRGMNTGL------ASWEHITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAGVMT 361
+G++ ++ + +++ + +I NG I+ + + L + V GVM
Sbjct: 193 AWLKGLSPAENRTVPPLAYPMVYQLKQDFPGLEIIINGGIKTIEAINDHLRE--VDGVMI 250
Query: 362 AEGNLYNP---ALFTGQTRPAWEL 382
NP A F ++P + L
Sbjct: 251 GREAYANPLFCAAFDDLSKPVFSL 274
>TIGR_CMR|CBU_0904 [details] [associations]
symbol:CBU_0904 "TIM-barrel protein, yjbN family"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539 OMA:IPPLDYD
ProtClustDB:PRK11815 TIGRFAMs:TIGR00742 RefSeq:NP_819919.1
ProteinModelPortal:Q83D40 PRIDE:Q83D40 GeneID:1208797
KEGG:cbu:CBU_0904 PATRIC:17930509
BioCyc:CBUR227377:GJ7S-895-MONOMER Uniprot:Q83D40
Length = 353
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 75/264 (28%), Positives = 129/264 (48%)
Query: 136 LIIQRTIFPRLGSPRFI-LAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLR 193
L IQ I+ RL R I +APM+ ++ +R+ R+ H L YT MV+ + K+ R
Sbjct: 15 LKIQSIIYNRLMLNRRISIAPMMGCTDRHFRMFMRQISRHVLLYTEMVTTGALLKGKQWR 74
Query: 194 QEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYL 252
L +PE+ PL +Q G+D ++L A+LAE D I++N+GCP G +GA L
Sbjct: 75 --CLDYSPEEHPLALQVGGSDPQSLALCARLAEEKGFDEINLNVGCPSGRVIAGRFGACL 132
Query: 253 QDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVE----YARMLERAGCQLLAVHGRT 308
+ L+ + V+++ V +PVS K R D + E + + + AGC++ +H R
Sbjct: 133 LKEAELVADCVAAMSAEVNIPVSVKTRTGVDDQDSYEHLYHFVKTVAEAGCRIFIIHARK 192
Query: 309 VDQRGMNTGL------ASWEHITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAGVMT 361
+G++ ++ + +++ + +I NG I+ + + L + V GVM
Sbjct: 193 AWLKGLSPAENRTVPPLAYPMVYQLKQDFPGLEIIINGGIKTIEAINDHLRE--VDGVMI 250
Query: 362 AEGNLYNP---ALFTGQTRPAWEL 382
NP A F ++P + L
Sbjct: 251 GREAYANPLFCAAFDDLSKPVFSL 274
>TIGR_CMR|SPO_2374 [details] [associations]
symbol:SPO_2374 "tRNA-dihydrouridine synthase A"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=ISS] InterPro:IPR001269
InterPro:IPR004653 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0050660 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539
OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:YP_167596.1 ProteinModelPortal:Q5LQV9 GeneID:3194172
KEGG:sil:SPO2374 PATRIC:23378123 Uniprot:Q5LQV9
Length = 344
Score = 233 (87.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 80/268 (29%), Positives = 120/268 (44%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPLII 208
R APM+D ++ R L R L YT MV+A + L +L + E+ P+ +
Sbjct: 12 RMSCAPMMDWTDRHCRYLHRLLSRQTLLYTEMVTAPALVRGGALH--LLEYSVEEHPVAL 69
Query: 209 QFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLR 267
Q G+D + L +AA+L AE D I++N GCP + G +GA L L+ + V+++R
Sbjct: 70 QLGGSDPEELAQAARLGAEAGYDEINLNCGCPSDRVQSGTFGAVLMKHPGLVADCVTAMR 129
Query: 268 QAVQVPVSCKIRIYQDVN--KTV--EYARMLERAGCQLLAVHGRTVDQRGM----NTGLA 319
+AV V V+ K RI D +TV E+ + AGCQ + +H R +G+ N +
Sbjct: 130 EAVDVEVTVKCRIGVDDQDPETVLPEFLEQIAGAGCQRVIIHARKAWLQGLSPKENRDIP 189
Query: 320 SWEHITAVRKALTIP---VIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQT 376
++ R P + NG I LA A L G+ GVM + PA +
Sbjct: 190 PLDYDLVHRMKARFPGMHISINGGIDTLAAARAHL-DAGLDGVMIGRAAYHQPADILCKA 248
Query: 377 RPAWELASEYLDLVAQYPVRLQYARGHV 404
P D V L Y H+
Sbjct: 249 DPLIYGTGTASDPVTAVRAMLPYIEAHL 276
>UNIPROTKB|Q9KUX9 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase A" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004653 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
PIR:G82330 RefSeq:NP_230033.1 ProteinModelPortal:Q9KUX9
DNASU:2615022 GeneID:2615022 KEGG:vch:VC0379 PATRIC:20079827
Uniprot:Q9KUX9
Length = 327
Score = 230 (86.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 80/291 (27%), Positives = 134/291 (46%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPL 206
S R +APM+D ++ R R + L YT MV+ I R + L E+ P+
Sbjct: 4 SCRLSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHG---RGDFLAYNQEEHPV 60
Query: 207 IIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSS 265
+QF G++ K+L AKLA+ D I++N+GCP + G +GA L + L+ V++
Sbjct: 61 ALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAA 120
Query: 266 LRQAVQVPVSCKIRIYQDVNKTVEY-----ARMLERAGCQLLAVHGRTVDQRGM----NT 316
+R V +PV+ K RI D + E+ A + E+ GC+ +H R G+ N
Sbjct: 121 MRAVVDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENR 180
Query: 317 GLASWEHITAVRKALTIP---VIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373
+ ++ A + P + NG ++ L EA L + GVM NP L
Sbjct: 181 EIPPLDYPRAYQIKRDFPHLTIAVNGGVKSLE--EAKLHLQHLDGVMIGREAYQNPYLLA 238
Query: 374 GQTRPAWELA------SEYLDLVAQYPVRLQYARG-HVFNMCHHLLTLPEN 417
+ + L S+ + + Y + + ++G H+ +M H+L L +N
Sbjct: 239 EVDQQIFGLETPVKKRSQVIHEMMPY-IERELSQGTHLGHMTRHMLGLFQN 288
>TIGR_CMR|VC_0379 [details] [associations]
symbol:VC_0379 "TIM-barrel protein, yjbN family"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR004653 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
PIR:G82330 RefSeq:NP_230033.1 ProteinModelPortal:Q9KUX9
DNASU:2615022 GeneID:2615022 KEGG:vch:VC0379 PATRIC:20079827
Uniprot:Q9KUX9
Length = 327
Score = 230 (86.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 80/291 (27%), Positives = 134/291 (46%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPL 206
S R +APM+D ++ R R + L YT MV+ I R + L E+ P+
Sbjct: 4 SCRLSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHG---RGDFLAYNQEEHPV 60
Query: 207 IIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSS 265
+QF G++ K+L AKLA+ D I++N+GCP + G +GA L + L+ V++
Sbjct: 61 ALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAA 120
Query: 266 LRQAVQVPVSCKIRIYQDVNKTVEY-----ARMLERAGCQLLAVHGRTVDQRGM----NT 316
+R V +PV+ K RI D + E+ A + E+ GC+ +H R G+ N
Sbjct: 121 MRAVVDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENR 180
Query: 317 GLASWEHITAVRKALTIP---VIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373
+ ++ A + P + NG ++ L EA L + GVM NP L
Sbjct: 181 EIPPLDYPRAYQIKRDFPHLTIAVNGGVKSLE--EAKLHLQHLDGVMIGREAYQNPYLLA 238
Query: 374 GQTRPAWELA------SEYLDLVAQYPVRLQYARG-HVFNMCHHLLTLPEN 417
+ + L S+ + + Y + + ++G H+ +M H+L L +N
Sbjct: 239 EVDQQIFGLETPVKKRSQVIHEMMPY-IERELSQGTHLGHMTRHMLGLFQN 288
>UNIPROTKB|Q607T6 [details] [associations]
symbol:MCA1669 "tRNA-dihydrouridine synthase"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE017282 GenomeReviews:AE017282_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539 OMA:IPPLDYD
ProtClustDB:PRK11815 TIGRFAMs:TIGR00742 RefSeq:YP_114112.1
ProteinModelPortal:Q607T6 GeneID:3102115 KEGG:mca:MCA1669
PATRIC:22607174 Uniprot:Q607T6
Length = 360
Score = 233 (87.1 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 71/241 (29%), Positives = 115/241 (47%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPLII 208
R +APM+D ++ R R H L YT MV+ + R+ +L P + PL I
Sbjct: 29 RLSVAPMMDWTDRHCRFFLRLISRHTLLYTEMVTTAAILHGD--RERLLGFHPAEHPLAI 86
Query: 209 QFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLR 267
Q G+D + L E AK+AE D +++N+GCP + G +GA L + + + V ++
Sbjct: 87 QLGGSDPEALAECAKIAEFRGFDEVNLNVGCPSPRVQTGRFGACLMAEPERVADCVRAMC 146
Query: 268 QAVQVPVSCKIRIYQDVNKTVE----YARMLERAGCQLLAVHGRTVDQRGMN------TG 317
+AV VPV+ K RI D + E + ++ AGC+ VH R +G++ T
Sbjct: 147 EAVSVPVTVKTRIGIDDRDSYEDLLHFVTIVAEAGCRTFIVHARKAWLQGLSPKENRQTP 206
Query: 318 LASWEHITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQT 376
++ + ++ L + ++ NG IQ L + E L+ GVM +NP L
Sbjct: 207 PLRYDVVRRLKSELPELAIVLNGGIQTLDEAERHLSWCD--GVMIGRAAYHNPYLLAEAD 264
Query: 377 R 377
R
Sbjct: 265 R 265
>DICTYBASE|DDB_G0292686 [details] [associations]
symbol:dus3l "tRNA-dihydrouridine synthase 3-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA;ISS] [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
SMART:SM00356 dictyBase:DDB_G0292686 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AAFI02000194 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 RefSeq:XP_629571.1
ProteinModelPortal:Q54CU9 STRING:Q54CU9 EnsemblProtists:DDB0238072
GeneID:8628832 KEGG:ddi:DDB_G0292686 KO:K05544 OMA:WGASAIT
ProtClustDB:CLSZ2495295 Uniprot:Q54CU9
Length = 671
Score = 240 (89.5 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 69/251 (27%), Positives = 117/251 (46%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
+ ILAP+ LP+R + +R G+ + M + + K +L P + +Q
Sbjct: 325 QLILAPLTTVGNLPFRRICKRLGADITIGEMALTTKLLEGTKSELALLKRHPCEDKFGVQ 384
Query: 210 FCGNDSKNLTEAAKLAEPHCDG--IDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVSSL 266
CG+ + A+ E D +DIN GCP +V G GA L + + L+ +
Sbjct: 385 ICGSYVDAAVKCAEFIENEIDADFVDINSGCPIDLVCNMGA-GAALMERPKKVEQLLRGI 443
Query: 267 RQAVQVPVSCKIRI--YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWEHI 324
++ P + KIRI +D + L G + +HGR+ QR + LA+W+++
Sbjct: 444 SSSLSCPTTIKIRIGKSEDAPTAHKLIPSLGEWGACAVTLHGRSRAQR--YSRLANWDYV 501
Query: 325 TAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAWEL- 382
+ +IP+I NG+I DV + V+ +M A G L P +FT + + W++
Sbjct: 502 KQCSEVSSIPLIGNGDIYNYQDVVNIYDSSKVSSIMIARGALIKPWIFTEIKEKREWDIS 561
Query: 383 ASEYLDLVAQY 393
ASE LD + +
Sbjct: 562 ASERLDFIRDF 572
>UNIPROTKB|F8WEL2 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC004839 EMBL:AC002381 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HGNC:HGNC:21517 IPI:IPI00925668
ProteinModelPortal:F8WEL2 SMR:F8WEL2 Ensembl:ENST00000443233
ArrayExpress:F8WEL2 Bgee:F8WEL2 Uniprot:F8WEL2
Length = 119
Score = 214 (80.4 bits), Expect = 9.1e-17, P = 9.1e-17
Identities = 41/89 (46%), Positives = 57/89 (64%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFC 211
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+QF
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTTNQGDCPLIVQFA 89
Query: 212 GNDSKNLTEAAKLAEPHCDGIDINIGCPQ 240
ND++ L++AA++ P+ +GIDIN GCPQ
Sbjct: 90 ANDARLLSDAARIVCPYANGIDINCGCPQ 118
Score = 119 (46.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 139
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R + D PLI+Q
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKARDSEFTTNQGDCPLIVQ 87
>CGD|CAL0003882 [details] [associations]
symbol:SMM1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
CGD:CAL0003882 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000101
EMBL:AACQ01000099 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05543 RefSeq:XP_714536.1 RefSeq:XP_714632.1
ProteinModelPortal:Q59YG4 STRING:Q59YG4 GeneID:3643710
GeneID:3643778 KEGG:cal:CaO19.1362 KEGG:cal:CaO19.8942
Uniprot:Q59YG4
Length = 433
Score = 188 (71.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 60/239 (25%), Positives = 112/239 (46%)
Query: 180 MVSAHQFIADKKLRQEILMSTP-EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGC 238
+VS HQ +DKK I P E LI+Q +D + +AA+ DGID+N GC
Sbjct: 60 IVSNHQQ-SDKKT--VIFRKHPVETGRLILQLGSSDPQLAVDAARKVIDDVDGIDLNCGC 116
Query: 239 PQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVP----VSCKIRIYQDVNKTVEYARML 294
P+ + GA L L +++ +L + + +P +SCKIR++ + +++ +
Sbjct: 117 PKNFSTHSGMGAELLKTPDKLCSILINLVEKIGIPNKKSISCKIRLFNNYDQSKNLIEKI 176
Query: 295 ERAGCQLLAVHGRTVDQRGMNTGLASW-EHITAVRKALTIPVIANGNIQCLADV---EAC 350
+ G L +H RT R + ++ + + + + ++ NGN+Q +AD+ ++
Sbjct: 177 LQTGISNLTIHCRTPIMRNRQDPVWNFLPKLIPIIQTAGVNLVINGNMQNVADLKNLQSA 236
Query: 351 LAQTGVA--GVMTAEGNLYNPALFTGQTRPAWELASEYLDLVAQYPVRLQYARGHVFNM 407
L G +M AE NP++F+ +P + E ++ +Y + + NM
Sbjct: 237 LNDNGGGKLSIMIAEAAEANPSVFSHSPKPQCLIIQELFEICQKYYQNFSATKFLMLNM 295
Score = 87 (35.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 80 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQ 124
+ LAPMV + ELP RLLS RYG L +TP + DKK+ Q
Sbjct: 7 KLCLAPMVRSGELPIRLLSLRYGCDLLWTPE------LVDKKILQ 45
Score = 87 (35.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQ 194
+ LAPMV + ELP RLLS RYG L +TP + DKK+ Q
Sbjct: 7 KLCLAPMVRSGELPIRLLSLRYGCDLLWTPE------LVDKKILQ 45
Score = 41 (19.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 101 YGSHLCYTPMVSAHQF-IADKKLRQEI-LMSTPE--DRPLIIQRT 141
Y + LC PMV + + I LR L+ TPE D+ I+Q T
Sbjct: 4 YANKLCLAPMVRSGELPIRLLSLRYGCDLLWTPELVDKK-ILQST 47
Score = 39 (18.8 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 171 YGSHLCYTPMVSAHQF-IADKKLRQEI-LMSTPE 202
Y + LC PMV + + I LR L+ TPE
Sbjct: 4 YANKLCLAPMVRSGELPIRLLSLRYGCDLLWTPE 37
>UNIPROTKB|Q884C6 [details] [associations]
symbol:dusC "tRNA-dihydrouridine synthase C" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE016853
GenomeReviews:AE016853_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000217854 KO:K05541
RefSeq:NP_791991.1 ProteinModelPortal:Q884C6 GeneID:1183820
KEGG:pst:PSPTO_2169 PATRIC:19995624 OMA:EWIARIQ
ProtClustDB:CLSK867771 BioCyc:PSYR223283:GJIX-2214-MONOMER
Uniprot:Q884C6
Length = 317
Score = 221 (82.9 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 60/177 (33%), Positives = 87/177 (49%)
Query: 200 TPEDRPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPL 258
T PL +Q G+D L E A A E +D+N GCP R GA L + L
Sbjct: 59 TDAGTPLRLQLLGSDPVCLAENAAFACELGAPVLDLNFGCPAKTVNRSRGGAILLKEPEL 118
Query: 259 LTNLVSSLRQAV--QVPVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRT-VDQRGM 314
L +VS +R+AV +PV+ K+R+ Y++ + ++ AR L G + VH RT VD G
Sbjct: 119 LHTIVSQVRRAVPKDIPVTAKMRLGYENTDGALDCARALADGGAAQIVVHARTKVD--GY 176
Query: 315 NTGLASWEHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPAL 371
A WE I +++ + +PV+ANG I + D C G +M G + P L
Sbjct: 177 KPP-AHWEWIARIQEVVKVPVVANGEIWTVEDWRRCREICGARDIMIGRGLVARPDL 232
>UNIPROTKB|Q0C5H0 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0002943 "tRNA dihydrouridine
synthesis" evidence=ISS] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=ISS] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CP000158 GenomeReviews:CP000158_GR eggNOG:COG0042
GO:GO:0017150 PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539
OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:YP_759023.1 ProteinModelPortal:Q0C5H0 STRING:Q0C5H0
GeneID:4288047 KEGG:hne:HNE_0293 PATRIC:32213376
BioCyc:HNEP228405:GI69-337-MONOMER Uniprot:Q0C5H0
Length = 328
Score = 220 (82.5 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 72/240 (30%), Positives = 117/240 (48%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPLII 208
RF +APM+D ++ R R L +T MV+A I RQ ++ + + PL++
Sbjct: 8 RFSVAPMMDWTDRHCRAFHRTLTKRALLWTEMVTADAVIHGD--RQRLIGFSDVEHPLVL 65
Query: 209 QFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLR 267
Q G++ L EAA++AE + D +++N GCP + G +GA L + L+ + V+++R
Sbjct: 66 QLGGSEPGKLAEAARIAEGYGYDEVNLNCGCPSERVQSGAFGACLMAEPDLVADCVAAMR 125
Query: 268 QAVQVPVSCKIRIYQD---VNKTV-EYARMLERAGCQLLAVHGRTVDQRGM----NTGLA 319
AV +PV+ K RI D +T+ + + AGC + VH R +G+ N +
Sbjct: 126 AAVSIPVTVKNRIAIDDLPARETLFTFIEKVSVAGCSVFTVHARKAWLKGLSPKENREVP 185
Query: 320 SWEH-ITAVRKALT--IPVIANGNIQCLADVEACLAQTGVA-GVMTAEGNLYNPALFTGQ 375
++ + A K + +I NG I A ++ C GV GVM P L GQ
Sbjct: 186 PLDYGLVAELKTARPDLTIILNGGI---ATIDQCRDHIGVFDGVMLGRAAYQTPGLL-GQ 241
>UNIPROTKB|P32695 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase A" species:83333
"Escherichia coli K-12" [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;IMP] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA;IMP] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U00006 eggNOG:COG0042 GO:GO:0017150
PANTHER:PTHR11082 RefSeq:NP_418473.2 RefSeq:YP_492192.1
ProteinModelPortal:P32695 SMR:P32695 PRIDE:P32695
EnsemblBacteria:EBESCT00000004365 EnsemblBacteria:EBESCT00000018223
GeneID:12930614 GeneID:948558 KEGG:ecj:Y75_p3936 KEGG:eco:b4049
PATRIC:32123637 EchoBASE:EB1876 EcoGene:EG11932
HOGENOM:HOG000259834 KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815
BioCyc:EcoCyc:EG11932-MONOMER BioCyc:ECOL316407:JW5950-MONOMER
BioCyc:MetaCyc:EG11932-MONOMER Genevestigator:P32695
TIGRFAMs:TIGR00742 Uniprot:P32695
Length = 330
Score = 214 (80.4 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 76/287 (26%), Positives = 130/287 (45%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPL 206
S RF +APM+D ++ R R + L YT MV+ I K + L + E+ P+
Sbjct: 10 SGRFSVAPMLDWTDRHCRYFLRLLSRNTLLYTEMVTTGAIIHGKG---DYLAYSEEEHPV 66
Query: 207 IIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSS 265
+Q G+D L + AKLAE D I++N+GCP + G +GA L + L+ + V +
Sbjct: 67 ALQLGGSDPAALAQCAKLAEARGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKA 126
Query: 266 LRQAVQVPVSCKIRIYQDVNKTVEYA-----RMLERAGCQLLAVHGRTVDQRGM----NT 316
+R V +PV+ K RI D + E+ + + C++ +H R G+ N
Sbjct: 127 MRDVVSIPVTVKTRIGIDDQDSYEFLCDFINTVSGKGECEMFIIHARKAWLSGLSPKENR 186
Query: 317 GLASWEHITAVRKALTIPVIA---NGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373
+ ++ + P + NG I+ L + +A L + GVM NP +
Sbjct: 187 EIPPLDYPRVYQLKRDFPHLTMSINGGIKSLEEAKAHLQH--MDGVMVGREAYQNPGILA 244
Query: 374 GQTRPAWELASEYLDLVA----QYP-VRLQYARG-HVFNMCHHLLTL 414
R + + D VA YP + + ++G ++ ++ H+L L
Sbjct: 245 AVDREIFGSSDTDADPVAVVRAMYPYIERELSQGTYLGHITRHMLGL 291
>FB|FBgn0032819 [details] [associations]
symbol:CG10463 species:7227 "Drosophila melanogaster"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50103 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0008270
GO:GO:0003676 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 EMBL:AY119278 ProteinModelPortal:Q8MRT5
SMR:Q8MRT5 STRING:Q8MRT5 PaxDb:Q8MRT5 PRIDE:Q8MRT5
FlyBase:FBgn0032819 InParanoid:Q8MRT5 OrthoDB:EOG49CNPV
ArrayExpress:Q8MRT5 Bgee:Q8MRT5 Uniprot:Q8MRT5
Length = 604
Score = 220 (82.5 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 69/245 (28%), Positives = 118/245 (48%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQE-ILMSTPEDRPLI- 207
+ +L+P+ LP+R + + +G+ + M A + K + QE L + +
Sbjct: 258 KLVLSPLTTLGNLPFRRICKEFGADITCGEMACAQPLL--KGMGQEWALTKRHQSEDVFG 315
Query: 208 IQFCGNDSKNLTEAAKLAEP--HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVS 264
+Q CGN+ L +AA++ D ID+NIGCP ++ ++G A ++ L + S
Sbjct: 316 VQLCGNNPNMLNQAAQVIHETAQVDFIDLNIGCPIDLIYQQGGGSALMRRTNILELTVRS 375
Query: 265 SLRQAVQVPVSCKIR--IYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGLASWE 322
+ ++P + K+R IY D + E ++E G + +HGR+ +QR T A+W
Sbjct: 376 CAALSDRLPFTVKMRTGIYADKSVAHELLPLVEEWGASAVTLHGRSREQR--YTKHANWA 433
Query: 323 HIT-AVRKALTIPVIANGNIQCLAD-VEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPA 379
+I KA +PVI NG+I D +E V+ VM G L P +F + + A
Sbjct: 434 YIEECAAKAKRMPVIGNGDILSYEDYMERRTLAPHVSSVMIGRGALIKPWIFQEIKEKQA 493
Query: 380 WELAS 384
W +S
Sbjct: 494 WSPSS 498
>UNIPROTKB|Q48A03 [details] [associations]
symbol:CPS_0353 "tRNA-dihydrouridine synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:YP_267111.1 ProteinModelPortal:Q48A03 STRING:Q48A03
GeneID:3519427 KEGG:cps:CPS_0353 PATRIC:21464085
BioCyc:CPSY167879:GI48-448-MONOMER Uniprot:Q48A03
Length = 335
Score = 212 (79.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 77/303 (25%), Positives = 137/303 (45%)
Query: 132 EDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADK 190
+ +P I + TI +L +APM+D ++ R R H + YT MV+ + K
Sbjct: 6 DSKPYIARATINHKLS-----VAPMLDWTDKHSRYFYRLMTQHTVLYTEMVTTGAILRGK 60
Query: 191 KLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYG 249
+ L + PL++Q G+D K +TE AK+AE + D ++IN+GCP + G +G
Sbjct: 61 G---DYLSYNDAEHPLVLQLGGSDVKAMTECAKIAEQYGYDEVNINVGCPSDRVQNGRFG 117
Query: 250 AYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARM----LERAGCQLLAVH 305
A L + L+ V+ ++ A +PV+ K RI D + E+ + +A C+ +H
Sbjct: 118 ACLMAEPALVAQCVNQMQSATNIPVTVKSRIGIDDLDSYEFLHTFIEEVSKADCRHFIIH 177
Query: 306 GRTVDQRGM----NTGLA--SWEHITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAG 358
R G+ N + ++ + ++ + V NG I+ ++ L + G
Sbjct: 178 ARKAWLTGLSPKQNRDVPPLDYDRVYQIKNDFKDLEVSINGGIKTFSEANEHLQH--IDG 235
Query: 359 VMTAEGNLYN-PALFTGQTRPAWE-----LA-SEYLDLVAQYPVRLQYARGHVFNMCHHL 411
VM +YN P + ++ L+ SE +DL+ Y G +++ H+
Sbjct: 236 VMIGR-EIYNSPYMLADADNEIYQSDTIKLSRSEVIDLMVPYIDETIANGGRAWHVLRHM 294
Query: 412 LTL 414
L L
Sbjct: 295 LGL 297
>TIGR_CMR|CPS_0353 [details] [associations]
symbol:CPS_0353 "TIM-barrel protein, yjbN family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:YP_267111.1 ProteinModelPortal:Q48A03 STRING:Q48A03
GeneID:3519427 KEGG:cps:CPS_0353 PATRIC:21464085
BioCyc:CPSY167879:GI48-448-MONOMER Uniprot:Q48A03
Length = 335
Score = 212 (79.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 77/303 (25%), Positives = 137/303 (45%)
Query: 132 EDRPLIIQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADK 190
+ +P I + TI +L +APM+D ++ R R H + YT MV+ + K
Sbjct: 6 DSKPYIARATINHKLS-----VAPMLDWTDKHSRYFYRLMTQHTVLYTEMVTTGAILRGK 60
Query: 191 KLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYG 249
+ L + PL++Q G+D K +TE AK+AE + D ++IN+GCP + G +G
Sbjct: 61 G---DYLSYNDAEHPLVLQLGGSDVKAMTECAKIAEQYGYDEVNINVGCPSDRVQNGRFG 117
Query: 250 AYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARM----LERAGCQLLAVH 305
A L + L+ V+ ++ A +PV+ K RI D + E+ + +A C+ +H
Sbjct: 118 ACLMAEPALVAQCVNQMQSATNIPVTVKSRIGIDDLDSYEFLHTFIEEVSKADCRHFIIH 177
Query: 306 GRTVDQRGM----NTGLA--SWEHITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAG 358
R G+ N + ++ + ++ + V NG I+ ++ L + G
Sbjct: 178 ARKAWLTGLSPKQNRDVPPLDYDRVYQIKNDFKDLEVSINGGIKTFSEANEHLQH--IDG 235
Query: 359 VMTAEGNLYN-PALFTGQTRPAWE-----LA-SEYLDLVAQYPVRLQYARGHVFNMCHHL 411
VM +YN P + ++ L+ SE +DL+ Y G +++ H+
Sbjct: 236 VMIGR-EIYNSPYMLADADNEIYQSDTIKLSRSEVIDLMVPYIDETIANGGRAWHVLRHM 294
Query: 412 LTL 414
L L
Sbjct: 295 LGL 297
>DICTYBASE|DDB_G0277081 [details] [associations]
symbol:DDB_G0277081 "tRNA-dihydrouridine synthase A"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
dictyBase:DDB_G0277081 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AAFI02000019 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 RefSeq:XP_642936.1 ProteinModelPortal:Q86L21
EnsemblProtists:DDB0217898 GeneID:8620805 KEGG:ddi:DDB_G0277081
InParanoid:Q86L21 OMA:PIVAQFF Uniprot:Q86L21
Length = 392
Score = 215 (80.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 69/243 (28%), Positives = 125/243 (51%)
Query: 145 RLGSPRFILAPMVDASELPWR-LLSRRYGS-HLCYTPMVSAHQFIADKKLRQEILMSTPE 202
+L P F LAPM D +++ +R LL+ G ++ + VSA +++ + L + +
Sbjct: 7 KLSKPIFSLAPMADVTDISFRFLLANCMGKPNVIFNEFVSADGLARNREALIDKLGYSTQ 66
Query: 203 DRPLIIQFCGNDSKNLTEAAKLA-EPHCDGIDINIGCP--QMVAKRGHYGAYLQDDWPLL 259
++P++ QF GN + E+AK+A E DG+DIN+GCP ++++ + GA L + L
Sbjct: 67 EKPIVAQFFGNKPEYFYESAKIANELGYDGVDINMGCPSRKVLSPKQASGAALITNPSLA 126
Query: 260 TNLVSSLRQAV--QVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG 317
+V ++A+ + PVS K RI D + E+ ++ + L +H RT ++ ++
Sbjct: 127 KEIVKITKEALNFEKPVSVKTRIGFDKIEIDEWIPLILESEPACLTLHLRT--KKELSLV 184
Query: 318 LASWEH-----ITAVRKALTIP---VIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369
A WEH + +R ++ P ++ NG+++ + Q G+ GVM NP
Sbjct: 185 PAHWEHQVLDRVVELRNQIS-PNTLLVGNGDVETYEQGIDYINQFGIDGVMIGRAVYGNP 243
Query: 370 ALF 372
LF
Sbjct: 244 WLF 246
>POMBASE|SPBC1709.06 [details] [associations]
symbol:dus2 "tRNA dihydrouridine synthase Dus2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006400 "tRNA modification" evidence=ISO] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=ISO] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PomBase:SPBC1709.06 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:CU329671 GenomeReviews:CU329671_GR
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 KO:K05543 PIR:T39634
RefSeq:NP_595439.1 ProteinModelPortal:O74731 STRING:O74731
EnsemblFungi:SPBC1709.06.1 GeneID:2540200 KEGG:spo:SPBC1709.06
OMA:LVERICD OrthoDB:EOG4PG98M NextBio:20801332 Uniprot:O74731
Length = 479
Score = 175 (66.7 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 63/245 (25%), Positives = 109/245 (44%)
Query: 202 EDRPLIIQFCGNDSKNLT-EAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYL---QDDW- 256
E LI Q G+ S L EAAKL GID+N GCP+ + GA L QD
Sbjct: 80 EANRLIFQL-GSASPELAVEAAKLVANDVAGIDLNCGCPKHFSVHAGMGAGLLKNQDRLV 138
Query: 257 PLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT 316
+L LV+ + + ++ +SCKIR+ + T++ + G + + VH RT R
Sbjct: 139 SILDALVNEIGKPYKISISCKIRLLETKEDTLKLVERICDTGVRAITVHCRTTPMRNTEP 198
Query: 317 GLASW-EHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTGQ 375
S+ I V + + ++ NG++ D + + GV GV+ A N + F +
Sbjct: 199 ADRSYLSEIVGVCRNKDVSILVNGDVLSYNDGLDVIEKYGVDGVLIARAAERNVSCFRIE 258
Query: 376 -TRPAWELASEYLDLVAQYPVRLQYARGHVFNMCHHLLTLPENSDVRLLVGKTNHIKDLR 434
++++A E+L + + G+ + ++ +VR L +DL+
Sbjct: 259 GPLSSFKVAEEFLKMALEVDNNF----GNTKYCLNQIMQGSFRKNVRQLAQTAKTYEDLK 314
Query: 435 KAVDM 439
KA ++
Sbjct: 315 KAFEI 319
Score = 82 (33.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 78 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDR 134
S + LAPMV ELP RLL+ RYG++L + P I DK L L TP +R
Sbjct: 7 SNKVCLAPMVRIGELPMRLLALRYGANLVWGPE------IVDKAL----LSGTPVER 53
Score = 82 (33.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDR 204
S + LAPMV ELP RLL+ RYG++L + P I DK L L TP +R
Sbjct: 7 SNKVCLAPMVRIGELPMRLLALRYGANLVWGPE------IVDKAL----LSGTPVER 53
>TAIR|locus:2087408 [details] [associations]
symbol:AT3G63510 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006808
"regulation of nitrogen utilization" evidence=ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016556 "mRNA modification" evidence=RCA]
[GO:0019243 "methylglyoxal catabolic process to D-lactate"
evidence=RCA] InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.20.20.70
GO:GO:0050660 UniGene:At.43820 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HOGENOM:HOG000259834 EMBL:BT000879
IPI:IPI00546722 RefSeq:NP_567149.2 ProteinModelPortal:Q8H128
SMR:Q8H128 EnsemblPlants:AT3G63510.1 GeneID:825526
KEGG:ath:AT3G63510 TAIR:At3g63510 InParanoid:Q8H128 OMA:SPTRHFI
PhylomeDB:Q8H128 ProtClustDB:CLSN2686569 ArrayExpress:Q8H128
Genevestigator:Q8H128 Uniprot:Q8H128
Length = 419
Score = 205 (77.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 76/271 (28%), Positives = 122/271 (45%)
Query: 125 EILMSTPEDRPLI-IQRTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHL-CYTPMVS 182
E+ +P +P T P L P F +APM+D ++ +R L+R H YT M++
Sbjct: 28 EMFFKSPMLKPTARFSSTSSPYL-PPSFSVAPMMDWTDNHYRTLARLITKHAWLYTEMIA 86
Query: 183 AHQFIADKKLRQEILMSTPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQ- 240
A + + L +P+ P+++Q G++ +NL +AAKL++ + D I++N GCP
Sbjct: 87 AETLVHQQTNLDRFLAFSPQQHPIVLQLGGSNVENLAKAAKLSDAYGYDEINLNCGCPSP 146
Query: 241 MVAKRGHYGAYLQDDWPLLTNLVSSLRQAVQVPVSCKIRIYQDVNKTV-EYARMLERAGC 299
VA G +G L L+ +S++ VPV+ K RI D + + E + +
Sbjct: 147 KVAGHGCFGVSLMLKPKLVGEAMSAIAANTNVPVTVKCRIGVDNHDSYDELCDFIYKVST 206
Query: 300 ----QLLAVHGRTVDQRGM----NTGLA--SWEHITA-VRKALTIPVIANGNIQCLADVE 348
+ VH R G+ N + +E+ A VR + NG I ++ V
Sbjct: 207 LSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYYYALVRDFPDLRFTINGGITSVSKVN 266
Query: 349 ACLAQTGVAGVMTAEGNLYNPALFTGQTRPA 379
A L + G GVM NP GQ A
Sbjct: 267 AALKE-GAHGVMVGRAAYNNPWQTLGQVDTA 296
>UNIPROTKB|Q884G7 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase A" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:NP_791948.1 ProteinModelPortal:Q884G7 GeneID:1183773
KEGG:pst:PSPTO_2126 PATRIC:19995530
BioCyc:PSYR223283:GJIX-2167-MONOMER Uniprot:Q884G7
Length = 336
Score = 198 (74.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 77/282 (27%), Positives = 117/282 (41%)
Query: 148 SPRFILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPL 206
S RF +APM+D ++ R R S L YT MV+ + R+ L + PL
Sbjct: 17 SRRFSVAPMMDWTDHHCRYFMRLLSSQALLYTEMVTTGALLHGD--RERFLRHDETEHPL 74
Query: 207 IIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSS 265
+Q G+ + L A+LAE D +++N+GCP + GA L L+ + V +
Sbjct: 75 ALQLGGSTAAGLAACARLAEAAGYDEVNLNVGCPSDRVQNNMIGACLMAHPQLVADCVKA 134
Query: 266 LRQAVQVPVSCKIRIYQDVNKTVEYARMLE------RAGCQLLAVHGRTVDQRGM----N 315
+R AV +PV+ K RI +N YA + + AGCQ VH R G+ N
Sbjct: 135 MRDAVGIPVTVKHRI--GINGRDSYAELCDFVGTVHDAGCQSFTVHARIAILEGLSPKEN 192
Query: 316 TGLASWEHITAVRKALTIP---VIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
+ + + P ++ NG I+ L L QT GVM +NP L
Sbjct: 193 RDIPPLRYDVVAQLKTDFPELEIVLNGGIKTLEQCSEHL-QT-FDGVMLGREAYHNPYLL 250
Query: 373 TGQTRPAWELASEYLDLVAQYPVRLQYARGHVF---NMCHHL 411
+ + + + A Y H+ NM HH+
Sbjct: 251 AQVDQQLFGSVAPVISRHAALESMRPYIAAHIASGGNM-HHV 291
>UNIPROTKB|I3L4Y9 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 GO:GO:0005739
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462 EMBL:AC040162
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HGNC:HGNC:26014
Ensembl:ENST00000575677 Bgee:I3L4Y9 Uniprot:I3L4Y9
Length = 158
Score = 179 (68.1 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 47/146 (32%), Positives = 76/146 (52%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + I K++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 254
+ + Q +D++ A+L E GID+N+GCP+ + +G GA L
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKGGMGAALLS 132
Query: 255 DWPLLTNLVSSLRQAVQVPVSCKIRI 280
D + ++S+L + + PV+CKIRI
Sbjct: 133 DPDKIEKILSTLVKGTRRPVTCKIRI 158
>UNIPROTKB|Q8EAJ0 [details] [associations]
symbol:dusA "tRNA-dihydrouridine synthase A" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR004653 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0042 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834 KO:K05539
OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:NP_719443.1 ProteinModelPortal:Q8EAJ0 GeneID:1171552
KEGG:son:SO_3912 PATRIC:23527504 Uniprot:Q8EAJ0
Length = 335
Score = 195 (73.7 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 64/234 (27%), Positives = 109/234 (46%)
Query: 151 FILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
F +APM+D ++ +R +R ++ L YT MV+ + R + L E+ PL +Q
Sbjct: 16 FSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHG---RGDYLTYNQEEHPLALQ 72
Query: 210 FCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQ 268
G++ L AKLA E D +++N+GCP + G +GA L + L+ V +++Q
Sbjct: 73 LGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPELVAECVDAMKQ 132
Query: 269 AVQVPVSCKIRIYQDVNKTVEY-ARMLERA---GCQLLAVHGRTVDQRGM----NTGLA- 319
V +PV+ K RI D + E+ ++ GC +H R +G+ N +
Sbjct: 133 VVDIPVTVKTRIGIDEQDSYEFLTHFIDTVMAKGCGEFIIHARKAWLQGLSPKENREIPP 192
Query: 320 -SWEHITAVRK---ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369
++ + +++ AL I + NG I L + L + GVM NP
Sbjct: 193 LDYDRVYQLKRDYPALNISI--NGGITSLEQAQTHLQH--LDGVMVGREAYQNP 242
>TIGR_CMR|SO_3912 [details] [associations]
symbol:SO_3912 "TIM-barrel protein, yjbN family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001269 InterPro:IPR004653
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000259834
KO:K05539 OMA:IPPLDYD ProtClustDB:PRK11815 TIGRFAMs:TIGR00742
RefSeq:NP_719443.1 ProteinModelPortal:Q8EAJ0 GeneID:1171552
KEGG:son:SO_3912 PATRIC:23527504 Uniprot:Q8EAJ0
Length = 335
Score = 195 (73.7 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 64/234 (27%), Positives = 109/234 (46%)
Query: 151 FILAPMVDASELPWRLLSRRYGSH-LCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQ 209
F +APM+D ++ +R +R ++ L YT MV+ + R + L E+ PL +Q
Sbjct: 16 FSIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHG---RGDYLTYNQEEHPLALQ 72
Query: 210 FCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQ 268
G++ L AKLA E D +++N+GCP + G +GA L + L+ V +++Q
Sbjct: 73 LGGSNPVELARCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPELVAECVDAMKQ 132
Query: 269 AVQVPVSCKIRIYQDVNKTVEY-ARMLERA---GCQLLAVHGRTVDQRGM----NTGLA- 319
V +PV+ K RI D + E+ ++ GC +H R +G+ N +
Sbjct: 133 VVDIPVTVKTRIGIDEQDSYEFLTHFIDTVMAKGCGEFIIHARKAWLQGLSPKENREIPP 192
Query: 320 -SWEHITAVRK---ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNP 369
++ + +++ AL I + NG I L + L + GVM NP
Sbjct: 193 LDYDRVYQLKRDYPALNISI--NGGITSLEQAQTHLQH--LDGVMVGREAYQNP 242
>WB|WBGene00021377 [details] [associations]
symbol:Y37E11B.5 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0008270 GO:GO:0003676 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544
HOGENOM:HOG000240610 OMA:MSEWALL GeneTree:ENSGT00550000075134
EMBL:FO080119 PIR:T33894 RefSeq:NP_500379.1
ProteinModelPortal:Q9TYN2 SMR:Q9TYN2 STRING:Q9TYN2 PaxDb:Q9TYN2
EnsemblMetazoa:Y37E11B.5.1 EnsemblMetazoa:Y37E11B.5.2 GeneID:177120
KEGG:cel:CELE_Y37E11B.5 UCSC:Y37E11B.5 CTD:177120
WormBase:Y37E11B.5 InParanoid:Q9TYN2 NextBio:895428 Uniprot:Q9TYN2
Length = 554
Score = 195 (73.7 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 66/253 (26%), Positives = 117/253 (46%)
Query: 153 LAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLIIQFCG 212
LAP+ LP+R + YG+ + M A ++ +L P ++ +Q G
Sbjct: 208 LAPLTTVGNLPFRRICVDYGADITCGEMALATSILSGTASEYSLLKRHPCEKIFGVQLAG 267
Query: 213 NDSKNLTEAAKLAEPH--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV 270
+ + +A+++ + D IDIN+GCP V + G L L ++++ + +
Sbjct: 268 GFADTMAKASQIVVENFDVDFIDINMGCPIDVVNQKGGGCALPSRPQKLFEVLAATKSVL 327
Query: 271 Q--VPVSCKIR--IYQDVNKTVEYARMLERAGCQ---LLAVHGRTVDQRGMNTGLASWEH 323
P++ KIR + + V K EY +++ L+ H R+ +QR T LA+W+
Sbjct: 328 GGCCPLTVKIRTGMKEGVLKAPEYVEHMKKHSWHTPDLITFHPRSKEQR--YTRLANWDF 385
Query: 324 ITAVRKALT-IPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFTG-QTRPAWE 381
V++A +P+ G+I D L Q V G+M G L P +FT R W+
Sbjct: 386 TFPVQEATKPVPLWVCGDILSWEDYYERLEQYPVNGIMIGRGALIKPWIFTEIDERRTWD 445
Query: 382 LAS-EYLDLVAQY 393
++S E DL+ ++
Sbjct: 446 ISSTERFDLLKKF 458
>TAIR|locus:2152758 [details] [associations]
symbol:AT5G47970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006808
"regulation of nitrogen utilization" evidence=ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0019243 "methylglyoxal catabolic process to D-lactate"
evidence=RCA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0009524 EMBL:AB017064
eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HOGENOM:HOG000259834 KO:K05539 EMBL:AB024025
ProtClustDB:CLSN2686569 EMBL:AY072094 EMBL:AY096579 IPI:IPI00520234
RefSeq:NP_001078731.1 RefSeq:NP_199608.1 UniGene:At.66758
ProteinModelPortal:Q9FI41 SMR:Q9FI41 EnsemblPlants:AT5G47970.1
EnsemblPlants:AT5G47970.2 GeneID:834848 KEGG:ath:AT5G47970
TAIR:At5g47970 InParanoid:Q9FI41 OMA:KATRLAN PhylomeDB:Q9FI41
ArrayExpress:Q9FI41 Genevestigator:Q9FI41 Uniprot:Q9FI41
Length = 387
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 62/244 (25%), Positives = 108/244 (44%)
Query: 141 TIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHL-CYTPMVSAHQFIADKKLRQEILMS 199
T+ P F +APM+ ++ +R L+R H YT M++A + + L
Sbjct: 2 TVSEAYSPPLFSIAPMMGWTDNHYRTLARLITKHAWLYTEMLAAETIVYQEDNLDSFLAF 61
Query: 200 TPEDRPLIIQFCGNDSKNLTEAAKLAEPHC-DGIDINIGCPQ-MVAKRGHYGAYLQDDWP 257
+P+ P+++Q G + +NL +A +LA + D I+ N GCP V+ RG +GA L D
Sbjct: 62 SPDQHPIVLQIGGRNLENLAKATRLANAYAYDEINFNCGCPSPKVSGRGCFGALLMLDPK 121
Query: 258 LLTNLVSSLRQAVQVPVSCKIRI----YQDVNKTVEYARMLERAG-CQLLAVHGRTVDQR 312
+ +S + V+ K RI + N+ ++ ++ + +H R
Sbjct: 122 FVGEAMSVIAANTNAAVTVKCRIGVDDHDSYNELCDFIHIVSSLSPTKHFIIHSRKALLS 181
Query: 313 GM----NTGLA--SWEHITAV-RKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGN 365
G+ N + +E A+ R + NG I + + +A L ++G GVM
Sbjct: 182 GLSPSDNRRIPPLKYEFFFALLRDFPDLKFTINGGINSVVEADAAL-RSGAHGVMLGRAV 240
Query: 366 LYNP 369
YNP
Sbjct: 241 YYNP 244
>UNIPROTKB|Q81ZD5 [details] [associations]
symbol:BAS0319 "tRNA-dihydrouridine synthase" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 InterPro:IPR024036
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Gene3D:1.10.1200.80 RefSeq:NP_842881.1
RefSeq:YP_016950.1 RefSeq:YP_026599.1 ProteinModelPortal:Q81ZD5
IntAct:Q81ZD5 DNASU:1086580 EnsemblBacteria:EBBACT00000010670
EnsemblBacteria:EBBACT00000015965 EnsemblBacteria:EBBACT00000023568
GeneID:1086580 GeneID:2815968 GeneID:2848698 KEGG:ban:BA_0334
KEGG:bar:GBAA_0334 KEGG:bat:BAS0319 HOGENOM:HOG000217857
OMA:NTESYCH ProtClustDB:CLSK865525
BioCyc:BANT260799:GJAJ-361-MONOMER
BioCyc:BANT261594:GJ7F-371-MONOMER Uniprot:Q81ZD5
Length = 329
Score = 185 (70.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 70/268 (26%), Positives = 133/268 (49%)
Query: 146 LGSPRFILAPMVDASELPWR-LLSRRYGSHLCYTPMVSAHQFIADKKLR--QEILMSTPE 202
L P F+LAPM D +++ +R ++S + +T ++ + + ++ + L+ T +
Sbjct: 9 LPRPFFVLAPMEDVTDVVFRHVVSEAGRPDVFFTEFTNSDSYCHPEGMKSVRGRLIFTED 68
Query: 203 DRPLIIQFCGNDSKNLTEAA-KLAEPHCDGIDINIGCP-QMVAKRGH-YGAYLQDDWPLL 259
++P++ G++ + + + +AE GIDIN+GCP VA RG G L+ D +
Sbjct: 69 EQPMVAHIWGDNPEYFRQMSIGMAELGFKGIDINMGCPVPNVASRGKGSGLILRPD--VA 126
Query: 260 TNLVSSLRQAVQVPVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL 318
L+ + + A +PVS K R+ ++++++ ++ + + L++H RT ++ M+
Sbjct: 127 AELIQAAK-AGGLPVSVKTRLGFKELSEWEDWLTHIFKQDIANLSIHLRTREE--MSQVD 183
Query: 319 ASWEHITAVRK-----ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373
A WE I ++K A + NG+I + G+ GVM G NP F
Sbjct: 184 AHWELIPEIKKLRDRIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFKNPFAF- 242
Query: 374 GQTRPAWELASEYLDLVA-QYPVRLQYA 400
+ P + E+LDL+ Q ++ QYA
Sbjct: 243 -EKEPREHSSKEHLDLLRLQLDLQDQYA 269
>TIGR_CMR|BA_0334 [details] [associations]
symbol:BA_0334 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
InterPro:IPR024036 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Gene3D:1.10.1200.80 RefSeq:NP_842881.1
RefSeq:YP_016950.1 RefSeq:YP_026599.1 ProteinModelPortal:Q81ZD5
IntAct:Q81ZD5 DNASU:1086580 EnsemblBacteria:EBBACT00000010670
EnsemblBacteria:EBBACT00000015965 EnsemblBacteria:EBBACT00000023568
GeneID:1086580 GeneID:2815968 GeneID:2848698 KEGG:ban:BA_0334
KEGG:bar:GBAA_0334 KEGG:bat:BAS0319 HOGENOM:HOG000217857
OMA:NTESYCH ProtClustDB:CLSK865525
BioCyc:BANT260799:GJAJ-361-MONOMER
BioCyc:BANT261594:GJ7F-371-MONOMER Uniprot:Q81ZD5
Length = 329
Score = 185 (70.2 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 70/268 (26%), Positives = 133/268 (49%)
Query: 146 LGSPRFILAPMVDASELPWR-LLSRRYGSHLCYTPMVSAHQFIADKKLR--QEILMSTPE 202
L P F+LAPM D +++ +R ++S + +T ++ + + ++ + L+ T +
Sbjct: 9 LPRPFFVLAPMEDVTDVVFRHVVSEAGRPDVFFTEFTNSDSYCHPEGMKSVRGRLIFTED 68
Query: 203 DRPLIIQFCGNDSKNLTEAA-KLAEPHCDGIDINIGCP-QMVAKRGH-YGAYLQDDWPLL 259
++P++ G++ + + + +AE GIDIN+GCP VA RG G L+ D +
Sbjct: 69 EQPMVAHIWGDNPEYFRQMSIGMAELGFKGIDINMGCPVPNVASRGKGSGLILRPD--VA 126
Query: 260 TNLVSSLRQAVQVPVSCKIRI-YQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTGL 318
L+ + + A +PVS K R+ ++++++ ++ + + L++H RT ++ M+
Sbjct: 127 AELIQAAK-AGGLPVSVKTRLGFKELSEWEDWLTHIFKQDIANLSIHLRTREE--MSQVD 183
Query: 319 ASWEHITAVRK-----ALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT 373
A WE I ++K A + NG+I + G+ GVM G NP F
Sbjct: 184 AHWELIPEIKKLRDRIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFKNPFAF- 242
Query: 374 GQTRPAWELASEYLDLVA-QYPVRLQYA 400
+ P + E+LDL+ Q ++ QYA
Sbjct: 243 -EKEPREHSSKEHLDLLRLQLDLQDQYA 269
>ASPGD|ASPL0000038251 [details] [associations]
symbol:AN2967 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:BN001306 EMBL:AACD01000051 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 HOGENOM:HOG000195580
KO:K05543 OrthoDB:EOG4PG98M RefSeq:XP_660571.1
ProteinModelPortal:Q5B913 STRING:Q5B913
EnsemblFungi:CADANIAT00010113 GeneID:2873785 KEGG:ani:AN2967.2
OMA:KEMIMHY Uniprot:Q5B913
Length = 437
Score = 147 (56.8 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 56/215 (26%), Positives = 86/215 (40%)
Query: 202 EDRPLIIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYL---QDDW-P 257
E LI Q + + +A KL +GID+N GCP+ + G GA L D
Sbjct: 98 EKGKLIFQMGTANPELAVQAGKLVAADVNGIDVNSGCPKPFSTSGGMGAALLRTPDKLVS 157
Query: 258 LLTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNTG 317
+L LV + + Q+ +S KIR+ + T L R G L +H RT R
Sbjct: 158 ILEALVKEVGEPYQIGISVKIRLLETPELTESLVSRLVRTGITGLTIHCRTTPMRPRERA 217
Query: 318 LASW-EHITAVRKALTIPVIANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALFT--- 373
+ I + + I NG++ + A + + G G M A N + F
Sbjct: 218 IRDQLRMIVSTCHNAGVACIMNGDVTSRDEALALMQEYGADGAMIATAAEANSSCFRSEA 277
Query: 374 -GQTRPAWELASEYLDLVAQYPVRLQYARGHVFNM 407
G P E+ EY+ L + R + ++ NM
Sbjct: 278 DGGLAPWREVVHEYVKLCIECENRFGNTK-YLINM 311
Score = 87 (35.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 80 RFILAPMVDASELPWRLLSRRYGSHLCYTP 109
+ +LAPMV + ELP RLL+ +YG+ LC+ P
Sbjct: 20 KVVLAPMVRSGELPSRLLALKYGADLCWGP 49
Score = 87 (35.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTP 179
+ +LAPMV + ELP RLL+ +YG+ LC+ P
Sbjct: 20 KVVLAPMVRSGELPSRLLALKYGADLCWGP 49
>GENEDB_PFALCIPARUM|PFI0920c [details] [associations]
symbol:PFI0920c "Dihydrouridine synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05539 GO:GO:0020011 EMBL:AL844508 RefSeq:XP_001352059.1
ProteinModelPortal:Q8I2W5 EnsemblProtists:PFI0920c:mRNA
GeneID:813464 KEGG:pfa:PFI0920c EuPathDB:PlasmoDB:PF3D7_0918800
HOGENOM:HOG000282922 ProtClustDB:CLSZ2432702 Uniprot:Q8I2W5
Length = 577
Score = 175 (66.7 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 50/183 (27%), Positives = 88/183 (48%)
Query: 140 RTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHL-CYTPMVSAHQFIADKKLRQEILM 198
R I + +P +APM++ + +R + R +T M+ + + + +E L
Sbjct: 189 RKINEKSTTPFIQVAPMINVTNRHFRAMVRIITKRAQLWTEMIVDNTLLYNLNNLEEHLG 248
Query: 199 STPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQM-VAKRGHYGAYLQDDW 256
+ P++ Q G D +++EAA L E D I+IN+GCP VA +G +GA L +
Sbjct: 249 FDNNEHPIVCQLGGCDMNSMSEAAILVEQAGYDEININVGCPSTKVANKGAFGASLMKNP 308
Query: 257 PLLTNLVSSLRQAVQVPVSCKIRI----YQDVNKTVEYARMLERAGCQLLAVHGRTVDQR 312
+ N+V +++ VQ+PV+ KIR Y + + + GC VH R +
Sbjct: 309 EQVRNIVYEIKKKVQIPVTVKIRTGVDNYDSFDFLKTFIETVSSVGCNHFIVHARKAWLK 368
Query: 313 GMN 315
G++
Sbjct: 369 GLD 371
>UNIPROTKB|Q8I2W5 [details] [associations]
symbol:PFI0920c "Dihydrouridine synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
KO:K05539 GO:GO:0020011 EMBL:AL844508 RefSeq:XP_001352059.1
ProteinModelPortal:Q8I2W5 EnsemblProtists:PFI0920c:mRNA
GeneID:813464 KEGG:pfa:PFI0920c EuPathDB:PlasmoDB:PF3D7_0918800
HOGENOM:HOG000282922 ProtClustDB:CLSZ2432702 Uniprot:Q8I2W5
Length = 577
Score = 175 (66.7 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 50/183 (27%), Positives = 88/183 (48%)
Query: 140 RTIFPRLGSPRFILAPMVDASELPWRLLSRRYGSHL-CYTPMVSAHQFIADKKLRQEILM 198
R I + +P +APM++ + +R + R +T M+ + + + +E L
Sbjct: 189 RKINEKSTTPFIQVAPMINVTNRHFRAMVRIITKRAQLWTEMIVDNTLLYNLNNLEEHLG 248
Query: 199 STPEDRPLIIQFCGNDSKNLTEAAKLAEPH-CDGIDINIGCPQM-VAKRGHYGAYLQDDW 256
+ P++ Q G D +++EAA L E D I+IN+GCP VA +G +GA L +
Sbjct: 249 FDNNEHPIVCQLGGCDMNSMSEAAILVEQAGYDEININVGCPSTKVANKGAFGASLMKNP 308
Query: 257 PLLTNLVSSLRQAVQVPVSCKIRI----YQDVNKTVEYARMLERAGCQLLAVHGRTVDQR 312
+ N+V +++ VQ+PV+ KIR Y + + + GC VH R +
Sbjct: 309 EQVRNIVYEIKKKVQIPVTVKIRTGVDNYDSFDFLKTFIETVSSVGCNHFIVHARKAWLK 368
Query: 313 GMN 315
G++
Sbjct: 369 GLD 371
>SGD|S000005298 [details] [associations]
symbol:SMM1 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0002943 "tRNA dihydrouridine
synthesis" evidence=IEA] [GO:0006400 "tRNA modification"
evidence=IMP;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA;IGI] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA;IDA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
SGD:S000005298 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 EMBL:BK006947 EMBL:Z71631 eggNOG:COG0042
GO:GO:0017150 PANTHER:PTHR11082 HOGENOM:HOG000195580 KO:K05543
GeneTree:ENSGT00550000075019 OrthoDB:EOG4PG98M EMBL:X91816
EMBL:Z71630 PIR:S63345 RefSeq:NP_014412.1 ProteinModelPortal:P53720
DIP:DIP-4102N MINT:MINT-551094 STRING:P53720 PaxDb:P53720
PeptideAtlas:P53720 EnsemblFungi:YNR015W GeneID:855749
KEGG:sce:YNR015W CYGD:YNR015w OMA:VEESMFY
BioCyc:MetaCyc:MONOMER-16677 NextBio:980160 Genevestigator:P53720
GermOnline:YNR015W Uniprot:P53720
Length = 384
Score = 129 (50.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 54/188 (28%), Positives = 83/188 (44%)
Query: 202 EDRPLIIQFCGNDSKNL-TEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYL---QDDWP 257
E LI Q G+ S L T+AA GIDIN GCP+ + G+ L D
Sbjct: 81 ESSKLIFQI-GSASPALATQAALKVINDVSGIDINAGCPKHFSIHSGMGSALLRTPDTLC 139
Query: 258 L-LTNLVSSLRQAVQVPVSCKIRIYQDVNKTVEYARMLERAGCQLLAVHGRTVDQRGMNT 316
L L LV ++ P+S KIR+ T++ + L G L VH R + R
Sbjct: 140 LILKELVKNVGNPHSKPISVKIRLLDTKQDTLQLVKRLCATGITNLTVHCRKTEMRNREQ 199
Query: 317 GLASW-EHITAVRKALTIPVIANGNIQCLA---DVEAC-LAQTGVAGVMTAEGNLYNPAL 371
+ + I + +A + +I NG I+ + D++A T + G M AE +P +
Sbjct: 200 PITDYIAEIYEICQANNVSLIVNGAIRDRSHFHDLQANHWKNTNIGG-MIAECAERDPTV 258
Query: 372 FTGQTRPA 379
F ++P+
Sbjct: 259 FDHTSKPS 266
Score = 82 (33.9 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 80 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQE---------ILMST 130
+ +LAPMV A ELP RL++ +G+ L ++P + + I + +R+E ++ S
Sbjct: 7 KLVLAPMVRAGELPTRLMALAHGADLVWSPEIIDKKLI--QCVRKENTALQTVDYVVPSK 64
Query: 131 PEDRP-LIIQRTIFPRLGSPRFI 152
+ RP ++ RT +P+L S + I
Sbjct: 65 VQTRPETLVFRT-YPKLESSKLI 86
Score = 79 (32.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQ 194
+ +LAPMV A ELP RL++ +G+ L ++P I DKKL Q
Sbjct: 7 KLVLAPMVRAGELPTRLMALAHGADLVWSPE------IIDKKLIQ 45
>UNIPROTKB|I3L4H0 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC130462
EMBL:AC040162 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
HGNC:HGNC:26014 Ensembl:ENST00000570709 Uniprot:I3L4H0
Length = 124
Score = 125 (49.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 34/112 (30%), Positives = 56/112 (50%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + I K++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRG 246
+ + Q +D++ A+L E GID+N+GCP+ + +G
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMGCPKQYSTKG 124
>POMBASE|SPAC16.04 [details] [associations]
symbol:dus3 "tRNA dihydrouridine synthase Dus3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006400 "tRNA modification" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=ISO] [GO:0050660 "flavin adenine dinucleotide
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
PROSITE:PS50103 PomBase:SPAC16.04 GO:GO:0005634 GO:GO:0005737
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
eggNOG:COG0042 GO:GO:0017150 PANTHER:PTHR11082 KO:K05544
HOGENOM:HOG000240610 OrthoDB:EOG4M950K PIR:T37732
RefSeq:NP_594572.1 ProteinModelPortal:Q9UTH9 STRING:Q9UTH9
EnsemblFungi:SPAC16.04.1 GeneID:2541573 KEGG:spo:SPAC16.04
OMA:PWIFEEV NextBio:20802667 Uniprot:Q9UTH9
Length = 617
Score = 146 (56.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 52/192 (27%), Positives = 88/192 (45%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSH-------LCYTPMVSAHQ--FIADKKLRQEILMST 200
R ILAP+ P+R L G+ +CY P++ HQ + + L E M
Sbjct: 240 RKILAPLTTVGNPPFRRLCGSLGADTFYSEMAMCY-PLMQGHQPEWALVRGLNYEREMMR 298
Query: 201 PEDRPLI-IQFCGNDSKNLTEAAKLAEPHCDGID---INIGCP-QMVAKRGHYGAYLQDD 255
R ++ +Q T+ A++ CDG+D +N GCP +V ++G + L++
Sbjct: 299 GGRRGILGVQLATGKLWQATKTAQVIAEQCDGVDFLDLNCGCPIDLVFRQGAGSSLLENP 358
Query: 256 WPLLTNLVSSLRQAVQVPVSCKIRI-YQDVNKTVE--YARMLERAGCQLLAVHGRTVDQR 312
LL NL + Q+PV+ K+R+ +D + V+ R+ +HGR+ QR
Sbjct: 359 GRLLRNLQGMDAVSGQIPVTVKLRMGNKDDHPVVKNLIGRIFNETNTSAATLHGRSRQQR 418
Query: 313 GMNTGLASWEHI 324
A+W++I
Sbjct: 419 YSKN--ANWDYI 428
>CGD|CAL0005565 [details] [associations]
symbol:orf19.1565 species:5476 "Candida albicans" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006400 "tRNA
modification" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
CGD:CAL0005565 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0046872 GO:GO:0003700 EMBL:AACQ01000008
EMBL:AACQ01000007 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05544 RefSeq:XP_722466.1 RefSeq:XP_722607.1
ProteinModelPortal:Q5ALL3 STRING:Q5ALL3 GeneID:3635756
GeneID:3635912 KEGG:cal:CaO19.1565 KEGG:cal:CaO19.9138
Uniprot:Q5ALL3
Length = 613
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 57/208 (27%), Positives = 88/208 (42%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLI-IQF 210
I++P+ LP+R L + G+ + Y+ M + I + + + P +Q
Sbjct: 248 IVSPLTTVGNLPYRRLMKTLGADVTYSEMALSVPLIQGHNPEWALPKAHVSEYPGFGVQI 307
Query: 211 CGNDSKNLTEAAKLAEP------HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLV 263
SK+ AAK AE H +++N GCP ++ K+G A L LL L
Sbjct: 308 AS--SKHWA-AAKAAEAIYRNTTHVSELNLNCGCPIDLLYKQGQGSALLDQPSKLLRILS 364
Query: 264 SSLRQAVQVPVSCKIR--IYQDVNKTVEY-ARMLERAGCQLLAVHGRTVDQRGMNTGLAS 320
+ +PV+ KIR I + N V +R+LE + +HGR+ QR A
Sbjct: 365 GMNASSGDIPVTVKIRTGIKEGKNTAVNLVSRVLEEGNAAAITLHGRSRQQRYSKE--AD 422
Query: 321 WEHITAVRKALTIPVIANGNIQCLADVE 348
W +I V V+ N N Q D E
Sbjct: 423 WNYIAEVGT-----VVKNWNEQQKEDKE 445
>UNIPROTKB|Q5ALL3 [details] [associations]
symbol:DUS3 "tRNA-dihydrouridine(47) synthase [NAD(P)(+)]"
species:237561 "Candida albicans SC5314" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103
CGD:CAL0005565 GO:GO:0005634 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0046872 GO:GO:0003700 EMBL:AACQ01000008
EMBL:AACQ01000007 eggNOG:COG0042 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05544 RefSeq:XP_722466.1 RefSeq:XP_722607.1
ProteinModelPortal:Q5ALL3 STRING:Q5ALL3 GeneID:3635756
GeneID:3635912 KEGG:cal:CaO19.1565 KEGG:cal:CaO19.9138
Uniprot:Q5ALL3
Length = 613
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 57/208 (27%), Positives = 88/208 (42%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMSTPEDRPLI-IQF 210
I++P+ LP+R L + G+ + Y+ M + I + + + P +Q
Sbjct: 248 IVSPLTTVGNLPYRRLMKTLGADVTYSEMALSVPLIQGHNPEWALPKAHVSEYPGFGVQI 307
Query: 211 CGNDSKNLTEAAKLAEP------HCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLV 263
SK+ AAK AE H +++N GCP ++ K+G A L LL L
Sbjct: 308 AS--SKHWA-AAKAAEAIYRNTTHVSELNLNCGCPIDLLYKQGQGSALLDQPSKLLRILS 364
Query: 264 SSLRQAVQVPVSCKIR--IYQDVNKTVEY-ARMLERAGCQLLAVHGRTVDQRGMNTGLAS 320
+ +PV+ KIR I + N V +R+LE + +HGR+ QR A
Sbjct: 365 GMNASSGDIPVTVKIRTGIKEGKNTAVNLVSRVLEEGNAAAITLHGRSRQQRYSKE--AD 422
Query: 321 WEHITAVRKALTIPVIANGNIQCLADVE 348
W +I V V+ N N Q D E
Sbjct: 423 WNYIAEVGT-----VVKNWNEQQKEDKE 445
>UNIPROTKB|A4RLF4 [details] [associations]
symbol:DUS3 "tRNA-dihydrouridine(47) synthase [NAD(P)(+)]"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000571
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PROSITE:PS50103 GO:GO:0005634
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:CM001232 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05544
OrthoDB:EOG4M950K RefSeq:XP_003714097.1 ProteinModelPortal:A4RLF4
STRING:A4RLF4 EnsemblFungi:MGG_01205T0 GeneID:2679761
KEGG:mgr:MGG_01205 Uniprot:A4RLF4
Length = 739
Score = 106 (42.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 35/113 (30%), Positives = 51/113 (45%)
Query: 227 PHCDGIDINIGCP-QMVAKRGHYGAYLQDDWPLLTNLVSSLRQAV-QVPVSCKIRIYQDV 284
PH ID+N GCP M+ K G G+ L + + ++ + +VP++CK+RI
Sbjct: 431 PHLRLIDLNCGCPIDMIYKAGA-GSALLEQHNKIERIIRGMNAVSGEVPITCKLRIGVKE 489
Query: 285 N-----KTVEYA--------RMLERAGCQLLAVHGRTVDQRGMNTGLASWEHI 324
N K +E A L GC + +HGRT QR A W +I
Sbjct: 490 NHPLAKKNIERAVFGSPDFRNQLGAPGCAAITLHGRTRQQRYKKP--ADWGYI 540
Score = 66 (28.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 107 YTPMVSA-HQFIADKKLRQEIL---MST---PEDRPLIIQRTIFPRLGSPRFILAPMVDA 159
YT +V H D+K R+E L +T P +P +R F R +P +LAP+
Sbjct: 278 YTNLVKQLHNARVDEKKREEELGELRATFVEPPFKPSEKRRLYFGR-ETP--VLAPLTTQ 334
Query: 160 SELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMS-TPEDRP 205
LP+R L G+ Y+ M A + ++ ++ + E RP
Sbjct: 335 GNLPFRRLCVDLGAQGTYSEMAMAKPIVQGQQSEWALMKAHESETRP 381
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 336 IANGNIQCLADVEACLAQTGVAGVMTAEGNLYNPALF 372
+ NG+ AD + ++ V VM G L P +F
Sbjct: 578 LGNGDCYSHADYYKAIDESHVDTVMIGRGALIKPWVF 614
>UNIPROTKB|H3BM64 [details] [associations]
symbol:DUS2L "tRNA-dihydrouridine(20) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
Pfam:PF01207 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC130462 EMBL:AC040162 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HGNC:HGNC:26014 Ensembl:ENST00000566306
Bgee:H3BM64 Uniprot:H3BM64
Length = 115
Score = 101 (40.6 bits), Expect = 0.00015, P = 0.00015
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 150 RFILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLRQEILMST----PEDRP 205
+ ILAPMV LP RLL+ YG+ + Y + + I K++ E+L + P+DR
Sbjct: 13 KLILAPMVRVGTLPMRLLALDYGADIVYCEELIDLKMIQCKRVVNEVLSTVDFVAPDDRV 72
Query: 206 L-----------IIQFCGNDSKNLTEAAKLAEPHCDGIDINIG 237
+ + Q +D++ A+L E GID+N+G
Sbjct: 73 VFRTCEREQNRVVFQMGTSDAERALAVARLVENDVAGIDVNMG 115
>UNIPROTKB|F2Z2E4 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC004839 EMBL:AC002381 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HGNC:HGNC:21517 IPI:IPI00924597 SMR:F2Z2E4
Ensembl:ENST00000422290 Ensembl:ENST00000431839
Ensembl:ENST00000436411 Uniprot:F2Z2E4
Length = 90
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 82 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLR 123
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKAR 71
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 152 ILAPMVDASELPWRLLSRRYGSHLCYTPMVSAHQFIADKKLR 193
+ APMV S+L +R L R+Y LCYTPM+ A F+ K R
Sbjct: 30 VCAPMVRYSKLAFRTLVRKYSCDLCYTPMIVAADFVKSIKAR 71
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 487 487 0.00081 119 3 11 22 0.49 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 125
No. of states in DFA: 624 (66 KB)
Total size of DFA: 320 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.15u 0.08s 45.23t Elapsed: 00:00:10
Total cpu time: 45.19u 0.08s 45.27t Elapsed: 00:00:10
Start: Thu Aug 15 15:08:48 2013 End: Thu Aug 15 15:08:58 2013
WARNINGS ISSUED: 1