Query psy7344
Match_columns 240
No_of_seqs 209 out of 2193
Neff 7.5
Searched_HMMs 29240
Date Sat Aug 17 00:21:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7344.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7344hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vhn_A Putative flavin oxidore 99.8 1.5E-20 5.2E-25 167.2 14.3 158 63-239 3-175 (318)
2 3b0p_A TRNA-dihydrouridine syn 99.8 1.8E-20 6E-25 169.0 11.9 153 63-229 2-171 (350)
3 4ef8_A Dihydroorotate dehydrog 99.5 3.1E-14 1.1E-18 128.3 10.3 96 114-225 126-231 (354)
4 3zwt_A Dihydroorotate dehydrog 99.5 9E-14 3.1E-18 125.9 10.5 104 114-227 146-259 (367)
5 3oix_A Putative dihydroorotate 99.5 1.3E-13 4.5E-18 123.8 9.4 93 113-221 127-223 (345)
6 3b0p_A TRNA-dihydrouridine syn 99.5 1.9E-14 6.4E-19 129.6 3.2 133 8-148 77-227 (350)
7 3i65_A Dihydroorotate dehydrog 99.4 1E-13 3.6E-18 126.8 7.1 107 115-227 182-308 (415)
8 1vhn_A Putative flavin oxidore 99.4 6.9E-14 2.4E-18 124.2 5.6 142 10-179 80-232 (318)
9 1jub_A Dihydroorotate dehydrog 99.4 1.2E-12 4.1E-17 115.5 10.6 96 114-225 93-195 (311)
10 1gte_A Dihydropyrimidine dehyd 99.3 1.4E-12 4.7E-17 131.9 7.8 111 114-238 634-771 (1025)
11 2e6f_A Dihydroorotate dehydrog 99.3 5.6E-12 1.9E-16 111.3 8.4 96 114-225 93-198 (314)
12 1tv5_A Dhodehase, dihydroorota 99.3 1.2E-11 4.2E-16 114.3 9.8 107 115-227 180-336 (443)
13 1f76_A Dihydroorotate dehydrog 99.2 5.4E-11 1.8E-15 106.1 9.5 105 114-226 133-249 (336)
14 1ep3_A Dihydroorotate dehydrog 99.2 8.2E-11 2.8E-15 103.3 9.3 99 114-227 98-210 (311)
15 1z41_A YQJM, probable NADH-dep 99.0 5.7E-10 1.9E-14 99.8 8.1 90 127-227 144-254 (338)
16 4ef8_A Dihydroorotate dehydrog 98.9 1.3E-10 4.4E-15 104.6 1.0 142 13-179 154-326 (354)
17 1icp_A OPR1, 12-oxophytodienoa 98.9 4.8E-09 1.6E-13 95.1 9.0 93 127-229 167-283 (376)
18 2r14_A Morphinone reductase; H 98.9 4E-09 1.4E-13 95.6 8.0 93 127-229 166-282 (377)
19 3gr7_A NADPH dehydrogenase; fl 98.8 4E-09 1.4E-13 94.4 7.5 91 126-227 143-255 (340)
20 3oix_A Putative dihydroorotate 98.8 1.8E-09 6.3E-14 96.8 5.1 147 8-179 148-324 (345)
21 3zwt_A Dihydroorotate dehydrog 98.8 2.3E-09 8E-14 96.9 4.3 138 13-179 175-347 (367)
22 1vyr_A Pentaerythritol tetrani 98.8 8.1E-09 2.8E-13 93.2 7.8 92 127-228 161-277 (364)
23 2hsa_B 12-oxophytodienoate red 98.8 1.3E-08 4.3E-13 93.1 7.5 92 127-228 171-292 (402)
24 2gou_A Oxidoreductase, FMN-bin 98.7 1.1E-08 3.9E-13 92.3 7.0 90 127-226 161-274 (365)
25 1ps9_A 2,4-dienoyl-COA reducta 98.7 1.7E-08 5.7E-13 97.6 7.8 93 127-228 141-254 (671)
26 3hgj_A Chromate reductase; TIM 98.7 2.6E-08 8.9E-13 89.4 7.2 93 126-227 151-265 (349)
27 1jub_A Dihydroorotate dehydrog 98.7 2E-08 6.9E-13 88.3 5.7 146 8-179 113-291 (311)
28 3i65_A Dihydroorotate dehydrog 98.7 6.8E-09 2.3E-13 95.0 2.4 137 13-179 210-394 (415)
29 1gte_A Dihydropyrimidine dehyd 98.6 2.5E-08 8.5E-13 100.8 4.8 146 9-179 656-836 (1025)
30 2nli_A Lactate oxidase; flavoe 98.6 6.3E-08 2.1E-12 87.5 6.8 110 114-238 132-271 (368)
31 3tjx_A Dihydroorotate dehydrog 98.6 2.4E-07 8.3E-12 83.0 10.3 92 113-220 125-226 (354)
32 4ab4_A Xenobiotic reductase B; 98.6 7.6E-08 2.6E-12 86.8 6.8 90 126-225 152-265 (362)
33 1o94_A Tmadh, trimethylamine d 98.5 9E-08 3.1E-12 93.4 6.7 90 127-225 149-260 (729)
34 3gka_A N-ethylmaleimide reduct 98.5 1.2E-07 4.1E-12 85.5 6.4 90 126-225 160-273 (361)
35 2nzl_A Hydroxyacid oxidase 1; 98.5 1.6E-07 5.3E-12 85.6 6.2 110 114-238 146-294 (392)
36 1tv5_A Dhodehase, dihydroorota 98.4 6.3E-08 2.1E-12 89.5 2.9 137 14-179 209-422 (443)
37 3kru_A NADH:flavin oxidoreduct 98.4 2.8E-07 9.7E-12 82.5 6.2 94 126-228 142-256 (343)
38 3aty_A Tcoye, prostaglandin F2 98.4 4.7E-07 1.6E-11 82.1 7.4 90 126-225 173-289 (379)
39 3l5l_A Xenobiotic reductase A; 98.4 4.1E-07 1.4E-11 82.0 6.9 91 126-225 157-269 (363)
40 2e6f_A Dihydroorotate dehydrog 98.4 4.8E-08 1.6E-12 86.0 0.6 144 10-179 115-293 (314)
41 3l5a_A NADH/flavin oxidoreduct 98.4 4.8E-07 1.6E-11 83.1 6.9 95 127-226 170-289 (419)
42 1p0k_A Isopentenyl-diphosphate 98.3 1.3E-06 4.4E-11 78.1 8.1 92 114-225 116-214 (349)
43 1f76_A Dihydroorotate dehydrog 98.3 2.5E-07 8.5E-12 82.2 3.3 137 13-176 164-335 (336)
44 3gr7_A NADPH dehydrogenase; fl 98.3 1.7E-07 5.8E-12 83.8 2.3 147 10-178 153-325 (340)
45 1gox_A (S)-2-hydroxy-acid oxid 98.2 2.7E-06 9.2E-11 76.8 8.2 95 115-222 123-253 (370)
46 1z41_A YQJM, probable NADH-dep 98.2 1.8E-07 6.3E-12 83.4 -0.0 149 9-179 152-326 (338)
47 3tjl_A NADPH dehydrogenase; OL 98.2 1.9E-06 6.4E-11 78.7 6.5 93 127-229 167-294 (407)
48 3k30_A Histamine dehydrogenase 98.2 2.7E-06 9.1E-11 82.4 7.7 91 127-226 156-267 (690)
49 1ep3_A Dihydroorotate dehydrog 98.2 1.5E-06 5.2E-11 75.9 4.9 141 10-179 120-289 (311)
50 1kbi_A Cytochrome B2, L-LCR; f 98.1 4.7E-06 1.6E-10 78.3 8.1 110 114-238 246-385 (511)
51 2r14_A Morphinone reductase; H 98.1 6.3E-07 2.1E-11 81.2 1.8 142 11-175 176-343 (377)
52 1icp_A OPR1, 12-oxophytodienoa 98.1 3.2E-07 1.1E-11 83.1 -0.7 144 9-175 175-345 (376)
53 2gou_A Oxidoreductase, FMN-bin 98.0 6.6E-07 2.3E-11 80.7 0.2 144 10-176 170-338 (365)
54 1vyr_A Pentaerythritol tetrani 98.0 8.9E-07 3E-11 79.8 0.6 142 11-175 171-338 (364)
55 3hgj_A Chromate reductase; TIM 98.0 2.2E-06 7.4E-11 76.8 2.4 148 10-179 161-337 (349)
56 4ab4_A Xenobiotic reductase B; 97.9 9.2E-07 3.1E-11 79.7 -0.8 139 10-176 162-324 (362)
57 3gka_A N-ethylmaleimide reduct 97.9 1.3E-06 4.5E-11 78.7 0.0 142 10-176 170-332 (361)
58 3tjx_A Dihydroorotate dehydrog 97.9 3.1E-06 1.1E-10 75.8 1.9 143 14-179 155-326 (354)
59 1ypf_A GMP reductase; GUAC, pu 97.9 7.6E-05 2.6E-09 66.3 10.6 132 63-224 45-181 (336)
60 2hsa_B 12-oxophytodienoate red 97.8 1.1E-05 3.8E-10 73.6 4.1 145 10-176 180-364 (402)
61 2yzr_A Pyridoxal biosynthesis 97.8 6.1E-06 2.1E-10 72.9 1.9 53 8-67 31-83 (330)
62 2nli_A Lactate oxidase; flavoe 97.6 1.2E-05 4.1E-10 72.5 1.1 130 10-147 155-314 (368)
63 3l5a_A NADH/flavin oxidoreduct 97.6 1.2E-05 4.1E-10 73.8 0.9 149 10-179 179-365 (419)
64 2z6i_A Trans-2-enoyl-ACP reduc 97.6 0.00019 6.5E-09 63.5 8.5 122 66-225 14-140 (332)
65 1xg4_A Probable methylisocitra 97.6 0.00024 8.2E-09 62.1 8.8 101 114-226 78-191 (295)
66 3sr7_A Isopentenyl-diphosphate 97.6 0.00015 5.1E-09 65.3 7.4 97 114-228 144-243 (365)
67 3vkj_A Isopentenyl-diphosphate 97.5 0.00015 5E-09 65.4 7.1 144 63-225 58-223 (368)
68 3kru_A NADH:flavin oxidoreduct 97.5 0.00014 4.7E-09 65.0 6.7 134 72-225 156-309 (343)
69 2yzr_A Pyridoxal biosynthesis 97.5 0.00024 8E-09 62.8 7.9 74 130-221 27-102 (330)
70 3k30_A Histamine dehydrogenase 97.5 1.7E-05 5.7E-10 76.8 0.7 142 10-176 165-340 (690)
71 1mzh_A Deoxyribose-phosphate a 97.5 4.6E-05 1.6E-09 64.0 3.3 79 131-239 75-163 (225)
72 3aty_A Tcoye, prostaglandin F2 97.4 2.3E-05 7.8E-10 71.0 0.4 141 12-176 186-352 (379)
73 2nzl_A Hydroxyacid oxidase 1; 97.4 1.5E-05 5E-10 72.5 -1.0 130 11-148 170-338 (392)
74 3l5l_A Xenobiotic reductase A; 97.4 4.5E-05 1.5E-09 68.5 1.6 146 11-178 168-343 (363)
75 2y88_A Phosphoribosyl isomeras 97.3 0.00037 1.3E-08 58.4 6.6 109 101-239 64-183 (244)
76 3bo9_A Putative nitroalkan dio 97.2 0.0017 5.8E-08 57.3 10.2 123 66-226 28-155 (326)
77 3o07_A Pyridoxine biosynthesis 97.2 0.00062 2.1E-08 58.7 7.0 73 131-221 22-96 (291)
78 3o07_A Pyridoxine biosynthesis 97.2 0.00013 4.4E-09 63.0 2.6 50 8-64 25-74 (291)
79 1qo2_A Molecule: N-((5-phospho 97.2 0.00042 1.4E-08 58.2 5.3 106 98-239 61-178 (241)
80 1o94_A Tmadh, trimethylamine d 97.0 0.00088 3E-08 65.2 6.2 136 72-225 162-323 (729)
81 1jvn_A Glutamine, bifunctional 97.0 0.00096 3.3E-08 63.1 6.2 95 130-239 351-486 (555)
82 1ps9_A 2,4-dienoyl-COA reducta 97.0 0.0011 3.7E-08 63.8 6.7 138 71-225 153-312 (671)
83 3khj_A Inosine-5-monophosphate 96.9 0.0046 1.6E-07 55.4 10.3 126 63-221 44-172 (361)
84 1p0k_A Isopentenyl-diphosphate 96.9 0.0002 6.7E-09 63.8 1.3 123 11-148 137-282 (349)
85 3tdn_A FLR symmetric alpha-bet 96.9 0.00047 1.6E-08 58.2 3.2 104 99-229 67-183 (247)
86 2agk_A 1-(5-phosphoribosyl)-5- 96.9 0.0011 3.8E-08 56.7 5.6 105 99-239 64-191 (260)
87 1vcf_A Isopentenyl-diphosphate 96.7 0.0023 7.7E-08 56.5 6.0 92 114-225 117-217 (332)
88 2gjl_A Hypothetical protein PA 96.7 0.0087 3E-07 52.5 9.7 123 67-226 18-149 (328)
89 1vzw_A Phosphoribosyl isomeras 96.7 0.0029 9.9E-08 53.0 6.3 99 101-230 65-174 (244)
90 3tjl_A NADPH dehydrogenase; OL 96.6 0.00042 1.5E-08 63.2 0.8 54 10-64 177-240 (407)
91 1ka9_F Imidazole glycerol phos 96.6 0.0037 1.3E-07 52.4 6.6 107 100-239 64-186 (252)
92 1thf_D HISF protein; thermophI 96.6 0.0041 1.4E-07 52.2 6.9 107 100-239 63-185 (253)
93 1kbi_A Cytochrome B2, L-LCR; f 96.6 0.00032 1.1E-08 65.8 -0.2 131 11-148 270-434 (511)
94 1p4c_A L(+)-mandelate dehydrog 96.6 0.0035 1.2E-07 56.5 6.5 109 114-239 123-268 (380)
95 1eep_A Inosine 5'-monophosphat 96.6 0.015 5.2E-07 52.6 10.7 76 117-221 144-221 (404)
96 1gox_A (S)-2-hydroxy-acid oxid 96.5 0.00083 2.8E-08 60.4 1.8 132 9-148 144-311 (370)
97 1mzh_A Deoxyribose-phosphate a 96.4 0.015 5.2E-07 48.5 9.1 82 116-221 117-203 (225)
98 1geq_A Tryptophan synthase alp 96.2 0.015 5.1E-07 48.7 8.2 95 115-223 5-116 (248)
99 1jvn_A Glutamine, bifunctional 96.2 0.001 3.5E-08 63.0 0.9 147 9-179 355-545 (555)
100 3bw2_A 2-nitropropane dioxygen 96.2 0.026 8.8E-07 50.4 9.8 126 64-225 10-175 (369)
101 1h5y_A HISF; histidine biosynt 96.1 0.0069 2.3E-07 50.3 5.6 103 100-229 66-181 (253)
102 2nv1_A Pyridoxal biosynthesis 95.8 0.018 6.2E-07 50.0 7.1 81 116-220 23-105 (305)
103 3r2g_A Inosine 5'-monophosphat 95.5 0.041 1.4E-06 49.2 8.2 125 63-221 41-168 (361)
104 3sgz_A Hydroxyacid oxidase 2; 95.5 0.01 3.5E-07 53.0 4.2 109 115-238 122-259 (352)
105 4a3u_A NCR, NADH\:flavin oxido 95.3 0.025 8.5E-07 50.5 6.0 91 127-227 152-266 (358)
106 2pgw_A Muconate cycloisomerase 95.2 0.066 2.3E-06 47.8 8.7 80 115-220 137-222 (384)
107 1p4c_A L(+)-mandelate dehydrog 95.1 0.0036 1.2E-07 56.4 -0.1 99 41-149 209-310 (380)
108 2w6r_A Imidazole glycerol phos 94.8 0.051 1.7E-06 45.8 6.3 100 99-229 62-183 (266)
109 3inp_A D-ribulose-phosphate 3- 94.8 0.1 3.6E-06 44.1 8.2 83 117-225 30-119 (246)
110 3vnd_A TSA, tryptophan synthas 94.5 0.077 2.6E-06 45.5 6.8 98 115-223 18-131 (267)
111 3sgz_A Hydroxyacid oxidase 2; 94.5 0.2 6.9E-06 44.6 9.7 98 99-224 205-302 (352)
112 4fo4_A Inosine 5'-monophosphat 94.3 0.17 5.7E-06 45.3 8.9 129 63-221 45-176 (366)
113 1rpx_A Protein (ribulose-phosp 94.3 0.12 4.3E-06 42.5 7.4 84 117-224 13-100 (230)
114 3eez_A Putative mandelate race 94.2 0.16 5.4E-06 45.4 8.4 80 114-219 134-219 (378)
115 1qop_A Tryptophan synthase alp 94.0 0.25 8.5E-06 42.0 9.0 95 115-225 17-132 (268)
116 3eoo_A Methylisocitrate lyase; 93.8 0.3 1E-05 42.5 9.2 100 114-225 83-194 (298)
117 1tqj_A Ribulose-phosphate 3-ep 93.7 0.14 4.6E-06 42.7 6.6 86 117-224 7-94 (230)
118 2zbt_A Pyridoxal biosynthesis 93.7 0.25 8.7E-06 42.4 8.6 85 115-223 22-108 (297)
119 2agk_A 1-(5-phosphoribosyl)-5- 93.7 0.028 9.5E-07 47.9 2.3 110 34-148 102-238 (260)
120 2hjp_A Phosphonopyruvate hydro 93.6 0.36 1.2E-05 41.8 9.4 104 114-226 75-190 (290)
121 3ih1_A Methylisocitrate lyase; 93.5 0.3 1E-05 42.6 8.6 101 114-226 89-199 (305)
122 2rdx_A Mandelate racemase/muco 93.5 0.25 8.5E-06 44.0 8.3 79 115-219 135-219 (379)
123 3ovp_A Ribulose-phosphate 3-ep 93.4 0.19 6.5E-06 41.9 7.0 85 117-225 7-97 (228)
124 1mdl_A Mandelate racemase; iso 93.4 0.18 6.1E-06 44.5 7.2 81 115-219 134-220 (359)
125 1rd5_A Tryptophan synthase alp 93.3 0.12 4.2E-06 43.6 5.7 97 115-223 18-126 (262)
126 1h1y_A D-ribulose-5-phosphate 93.3 0.15 5.1E-06 42.2 6.1 87 117-225 9-97 (228)
127 1vcf_A Isopentenyl-diphosphate 93.2 0.34 1.2E-05 42.4 8.7 105 100-225 171-287 (332)
128 2nv1_A Pyridoxal biosynthesis 93.2 0.14 4.7E-06 44.4 5.9 49 9-64 36-84 (305)
129 3ctl_A D-allulose-6-phosphate 93.1 0.14 4.7E-06 42.8 5.7 83 117-225 3-90 (231)
130 3ajx_A 3-hexulose-6-phosphate 93.1 0.19 6.4E-06 40.5 6.4 82 117-225 3-87 (207)
131 1wa3_A 2-keto-3-deoxy-6-phosph 93.1 0.2 6.7E-06 40.4 6.5 36 115-150 10-46 (205)
132 3ozy_A Putative mandelate race 93.0 0.38 1.3E-05 43.1 8.8 80 115-219 139-226 (389)
133 3oa3_A Aldolase; structural ge 93.0 0.89 3.1E-05 39.2 10.7 164 30-221 15-207 (288)
134 2fli_A Ribulose-phosphate 3-ep 92.8 0.21 7E-06 40.6 6.3 85 117-225 6-94 (220)
135 1s2w_A Phosphoenolpyruvate pho 92.6 0.67 2.3E-05 40.1 9.5 102 114-224 79-192 (295)
136 3ffs_A Inosine-5-monophosphate 92.5 0.77 2.6E-05 41.5 10.2 64 131-222 147-212 (400)
137 1zlp_A PSR132, petal death pro 92.3 0.56 1.9E-05 41.1 8.7 103 114-226 101-213 (318)
138 1jcn_A Inosine monophosphate d 92.3 0.34 1.1E-05 45.0 7.7 68 126-221 254-323 (514)
139 2ovl_A Putative racemase; stru 92.2 0.3 1E-05 43.3 7.0 71 125-219 146-222 (371)
140 2nql_A AGR_PAT_674P, isomerase 92.2 0.26 8.7E-06 44.1 6.5 80 115-219 153-239 (388)
141 3f4w_A Putative hexulose 6 pho 92.1 0.47 1.6E-05 38.2 7.6 76 124-225 10-87 (211)
142 3vkj_A Isopentenyl-diphosphate 91.9 0.57 1.9E-05 41.8 8.4 105 100-224 176-297 (368)
143 2p8b_A Mandelate racemase/muco 91.9 0.36 1.2E-05 42.7 7.1 81 115-220 131-218 (369)
144 4fxs_A Inosine-5'-monophosphat 91.9 0.14 4.8E-06 47.6 4.5 78 125-229 229-313 (496)
145 2qr6_A IMP dehydrogenase/GMP r 91.5 0.63 2.2E-05 41.6 8.3 106 99-225 199-308 (393)
146 2c6q_A GMP reductase 2; TIM ba 91.4 2 7E-05 37.9 11.5 128 62-221 55-188 (351)
147 1rvk_A Isomerase/lactonizing e 91.4 0.95 3.3E-05 40.1 9.4 78 124-219 148-231 (382)
148 3jr2_A Hexulose-6-phosphate sy 91.2 1.1 3.9E-05 36.4 9.0 85 116-225 8-93 (218)
149 3q58_A N-acetylmannosamine-6-p 91.2 0.38 1.3E-05 40.0 6.1 100 97-228 55-164 (229)
150 3b8i_A PA4872 oxaloacetate dec 91.1 1.4 4.7E-05 38.0 9.7 101 114-225 82-191 (287)
151 1nu5_A Chloromuconate cycloiso 91.0 0.79 2.7E-05 40.5 8.4 80 116-219 133-219 (370)
152 2ps2_A Putative mandelate race 91.0 1 3.5E-05 39.8 9.1 79 115-219 136-221 (371)
153 1y0e_A Putative N-acetylmannos 90.8 0.39 1.3E-05 39.1 5.8 75 117-225 9-98 (223)
154 3fa4_A 2,3-dimethylmalate lyas 90.7 1.5 5E-05 38.2 9.6 102 114-225 80-193 (302)
155 4avf_A Inosine-5'-monophosphat 90.6 0.29 1E-05 45.3 5.4 78 124-228 226-310 (490)
156 4fxs_A Inosine-5'-monophosphat 90.6 0.63 2.1E-05 43.2 7.6 77 134-225 288-365 (496)
157 4adt_A Pyridoxine biosynthetic 90.4 0.71 2.4E-05 40.0 7.3 69 131-219 32-104 (297)
158 3lye_A Oxaloacetate acetyl hyd 89.9 1.8 6.2E-05 37.6 9.5 102 115-226 89-202 (307)
159 1wv2_A Thiazole moeity, thiazo 89.9 0.77 2.6E-05 39.1 6.9 68 132-222 148-216 (265)
160 3igs_A N-acetylmannosamine-6-p 89.8 0.53 1.8E-05 39.2 5.8 100 97-228 55-164 (232)
161 3b4u_A Dihydrodipicolinate syn 89.7 1.6 5.4E-05 37.5 9.0 79 125-222 22-105 (294)
162 1eep_A Inosine 5'-monophosphat 89.7 0.65 2.2E-05 41.7 6.8 91 114-225 194-287 (404)
163 4avf_A Inosine-5'-monophosphat 89.7 0.79 2.7E-05 42.4 7.4 78 131-224 283-362 (490)
164 4af0_A Inosine-5'-monophosphat 89.7 0.69 2.4E-05 43.4 7.0 87 123-222 327-413 (556)
165 2ekc_A AQ_1548, tryptophan syn 89.6 0.95 3.2E-05 38.2 7.4 94 117-223 19-130 (262)
166 3l21_A DHDPS, dihydrodipicolin 89.5 1.4 4.8E-05 38.1 8.5 79 125-222 34-117 (304)
167 1xky_A Dihydrodipicolinate syn 89.4 1.4 4.9E-05 38.0 8.5 79 125-222 31-114 (301)
168 3flu_A DHDPS, dihydrodipicolin 89.2 1.5 5.1E-05 37.7 8.5 79 125-222 26-109 (297)
169 2wkj_A N-acetylneuraminate lya 89.2 1.5 5.3E-05 37.8 8.5 79 125-222 30-113 (303)
170 2ehh_A DHDPS, dihydrodipicolin 89.1 1.9 6.4E-05 37.0 9.0 79 125-222 19-102 (294)
171 3m5v_A DHDPS, dihydrodipicolin 89.1 1.6 5.6E-05 37.5 8.6 80 125-222 26-110 (301)
172 3s5o_A 4-hydroxy-2-oxoglutarat 88.9 2.5 8.4E-05 36.5 9.7 79 125-222 33-116 (307)
173 4gbu_A NADPH dehydrogenase 1; 88.9 1 3.5E-05 40.5 7.4 65 127-201 172-246 (400)
174 2qjg_A Putative aldolase MJ040 88.8 0.49 1.7E-05 39.8 5.0 129 68-223 37-187 (273)
175 2r8w_A AGR_C_1641P; APC7498, d 88.8 1.7 6E-05 38.0 8.7 79 125-222 53-136 (332)
176 2yxg_A DHDPS, dihydrodipicolin 88.8 1.8 6E-05 37.1 8.6 79 125-222 19-102 (289)
177 3na8_A Putative dihydrodipicol 88.7 1.3 4.5E-05 38.5 7.8 79 125-222 43-126 (315)
178 3cu2_A Ribulose-5-phosphate 3- 88.5 1.3 4.4E-05 37.1 7.3 81 117-225 16-102 (237)
179 3qze_A DHDPS, dihydrodipicolin 88.5 1.6 5.4E-05 37.9 8.2 79 125-222 42-125 (314)
180 1o5k_A DHDPS, dihydrodipicolin 88.5 1.6 5.5E-05 37.7 8.2 79 125-222 31-114 (306)
181 3ffs_A Inosine-5-monophosphate 88.5 1.4 4.8E-05 39.8 8.0 78 132-222 198-275 (400)
182 2ojp_A DHDPS, dihydrodipicolin 88.5 1.7 5.9E-05 37.2 8.3 79 125-222 20-103 (292)
183 3tak_A DHDPS, dihydrodipicolin 88.5 1.8 6.2E-05 37.1 8.5 79 125-222 20-103 (291)
184 1f6k_A N-acetylneuraminate lya 88.5 2 6.7E-05 36.9 8.7 79 125-222 22-106 (293)
185 1ypf_A GMP reductase; GUAC, pu 88.4 0.97 3.3E-05 39.6 6.8 35 192-227 209-243 (336)
186 1jcn_A Inosine monophosphate d 88.3 0.71 2.4E-05 42.8 6.2 32 192-224 357-388 (514)
187 3cpr_A Dihydrodipicolinate syn 88.3 2 6.8E-05 37.1 8.6 79 125-222 35-118 (304)
188 2p10_A MLL9387 protein; putati 88.2 0.44 1.5E-05 41.0 4.2 93 114-224 94-192 (286)
189 2rfg_A Dihydrodipicolinate syn 88.1 1.6 5.4E-05 37.6 7.8 79 125-222 19-102 (297)
190 3a5f_A Dihydrodipicolinate syn 88.0 1.8 6.2E-05 37.1 8.1 79 125-222 20-103 (291)
191 3daq_A DHDPS, dihydrodipicolin 88.0 1.8 6.2E-05 37.1 8.1 79 125-222 21-104 (292)
192 2qgy_A Enolase from the enviro 88.0 1.8 6.1E-05 38.6 8.4 73 123-219 147-225 (391)
193 1vrd_A Inosine-5'-monophosphat 88.0 1.3 4.5E-05 40.7 7.7 104 100-225 266-371 (494)
194 1f6y_A 5-methyltetrahydrofolat 87.9 1.5 5.1E-05 37.2 7.4 78 124-224 22-125 (262)
195 2y88_A Phosphoribosyl isomeras 87.9 0.066 2.3E-06 44.4 -1.1 60 98-177 180-242 (244)
196 2v9d_A YAGE; dihydrodipicolini 87.8 1.7 5.9E-05 38.2 8.1 79 125-222 50-133 (343)
197 3dz1_A Dihydrodipicolinate syn 87.8 2.2 7.4E-05 37.0 8.6 77 125-221 27-108 (313)
198 3si9_A DHDPS, dihydrodipicolin 87.7 1.9 6.4E-05 37.5 8.1 79 125-222 41-124 (315)
199 3r2g_A Inosine 5'-monophosphat 87.6 0.83 2.8E-05 40.7 5.9 101 100-225 129-230 (361)
200 3qfe_A Putative dihydrodipicol 87.5 2.2 7.5E-05 37.1 8.5 78 125-221 30-112 (318)
201 3eb2_A Putative dihydrodipicol 87.3 1.4 4.7E-05 38.0 6.9 79 125-222 23-106 (300)
202 3r4e_A Mandelate racemase/muco 87.2 3.2 0.00011 37.4 9.6 97 115-220 133-252 (418)
203 2c6q_A GMP reductase 2; TIM ba 87.2 1.6 5.5E-05 38.6 7.5 104 100-224 149-253 (351)
204 2vc6_A MOSA, dihydrodipicolina 87.2 1.8 6E-05 37.1 7.6 80 125-223 19-103 (292)
205 3fkr_A L-2-keto-3-deoxyarabona 87.0 1.9 6.6E-05 37.3 7.8 79 125-222 27-110 (309)
206 3rcy_A Mandelate racemase/muco 87.0 2.2 7.5E-05 38.7 8.4 85 124-220 145-235 (433)
207 3ro6_B Putative chloromuconate 86.9 2.5 8.6E-05 37.1 8.6 80 115-219 130-215 (356)
208 2qde_A Mandelate racemase/muco 86.9 2.1 7.2E-05 38.1 8.2 80 115-219 135-220 (397)
209 2v82_A 2-dehydro-3-deoxy-6-pho 86.8 1.7 5.7E-05 35.0 6.9 36 114-149 6-42 (212)
210 2yci_X 5-methyltetrahydrofolat 86.6 2 6.7E-05 36.7 7.4 76 125-223 32-133 (271)
211 2czd_A Orotidine 5'-phosphate 86.5 1.5 5.1E-05 35.4 6.4 34 192-225 52-88 (208)
212 3e96_A Dihydrodipicolinate syn 86.3 2.4 8.3E-05 36.7 8.1 79 125-222 31-113 (316)
213 2qdd_A Mandelate racemase/muco 86.1 1.4 4.8E-05 39.0 6.6 74 115-212 135-213 (378)
214 3tdn_A FLR symmetric alpha-bet 86.1 1.1 3.8E-05 37.1 5.6 74 128-225 36-110 (247)
215 3exr_A RMPD (hexulose-6-phosph 86.1 3 0.0001 34.3 8.1 86 115-225 6-92 (221)
216 3usb_A Inosine-5'-monophosphat 85.6 1.2 4.1E-05 41.4 6.0 79 131-225 310-390 (511)
217 1yxy_A Putative N-acetylmannos 85.5 1.1 3.7E-05 36.7 5.2 67 126-226 33-112 (234)
218 4dpp_A DHDPS 2, dihydrodipicol 85.5 3.4 0.00011 36.7 8.6 79 125-222 78-161 (360)
219 1ujp_A Tryptophan synthase alp 84.8 3.2 0.00011 35.2 7.9 88 117-221 18-125 (271)
220 2nuw_A 2-keto-3-deoxygluconate 84.4 5.9 0.0002 33.7 9.5 76 125-222 18-98 (288)
221 2ze3_A DFA0005; organic waste 84.4 4.7 0.00016 34.4 8.8 96 114-225 76-191 (275)
222 2hmc_A AGR_L_411P, dihydrodipi 84.2 3.4 0.00012 36.3 8.1 76 125-222 45-125 (344)
223 2gl5_A Putative dehydratase pr 84.2 2.1 7.3E-05 38.2 6.9 86 125-220 150-250 (410)
224 3o1n_A 3-dehydroquinate dehydr 83.9 6 0.0002 33.7 9.3 91 114-225 38-143 (276)
225 3h5d_A DHDPS, dihydrodipicolin 83.9 3.9 0.00013 35.4 8.2 79 125-222 26-110 (311)
226 1zfj_A Inosine monophosphate d 83.8 3.3 0.00011 37.8 8.1 78 130-225 286-367 (491)
227 3d0c_A Dihydrodipicolinate syn 83.7 3.3 0.00011 35.9 7.6 79 125-222 31-113 (314)
228 1tzz_A Hypothetical protein L1 83.6 4.4 0.00015 35.9 8.7 71 125-219 165-241 (392)
229 3rr1_A GALD, putative D-galact 83.3 4.2 0.00014 36.5 8.4 90 115-220 115-210 (405)
230 1to3_A Putative aldolase YIHT; 83.3 5.5 0.00019 34.4 8.9 104 102-229 143-260 (304)
231 2hzg_A Mandelate racemase/muco 83.2 2.6 9E-05 37.5 7.0 83 115-219 134-226 (401)
232 4dwd_A Mandelate racemase/muco 83.1 5.6 0.00019 35.5 9.1 88 115-220 126-223 (393)
233 3nav_A Tryptophan synthase alp 83.0 6 0.0002 33.6 8.9 96 116-222 21-132 (271)
234 2qr6_A IMP dehydrogenase/GMP r 83.0 2.5 8.4E-05 37.7 6.7 69 143-229 122-192 (393)
235 2vc6_A MOSA, dihydrodipicolina 82.7 2.5 8.5E-05 36.2 6.4 55 114-180 69-124 (292)
236 3sbf_A Mandelate racemase / mu 82.5 4.6 0.00016 36.0 8.4 97 115-220 123-233 (401)
237 4aaj_A N-(5'-phosphoribosyl)an 82.5 7 0.00024 32.3 8.9 82 115-225 19-102 (228)
238 2y5s_A DHPS, dihydropteroate s 82.4 2.6 8.8E-05 36.4 6.4 84 125-224 44-149 (294)
239 3stp_A Galactonate dehydratase 82.3 7.1 0.00024 35.1 9.5 87 115-219 168-261 (412)
240 2r91_A 2-keto-3-deoxy-(6-phosp 82.2 6.3 0.00022 33.5 8.8 76 125-222 17-97 (286)
241 2ox4_A Putative mandelate race 82.2 3.2 0.00011 37.0 7.1 83 125-219 146-240 (403)
242 1nsj_A PRAI, phosphoribosyl an 82.2 8.7 0.0003 31.1 9.2 82 118-225 3-86 (205)
243 3sr7_A Isopentenyl-diphosphate 82.1 5 0.00017 35.7 8.3 32 193-225 278-309 (365)
244 3k13_A 5-methyltetrahydrofolat 82.1 4.1 0.00014 35.3 7.5 79 124-225 34-143 (300)
245 1w3i_A EDA, 2-keto-3-deoxy glu 82.0 6.8 0.00023 33.4 8.9 76 125-222 18-98 (293)
246 3eb2_A Putative dihydrodipicol 81.9 2.3 7.9E-05 36.6 5.9 32 114-145 73-105 (300)
247 3khj_A Inosine-5-monophosphate 81.8 2.3 7.9E-05 37.7 6.0 89 114-221 145-235 (361)
248 1eix_A Orotidine 5'-monophosph 81.6 4 0.00014 33.9 7.2 82 115-225 15-102 (245)
249 1thf_D HISF protein; thermophI 81.6 1.6 5.5E-05 36.0 4.7 32 192-223 73-104 (253)
250 1v5x_A PRA isomerase, phosphor 81.3 10 0.00034 30.7 9.3 81 119-225 3-85 (203)
251 3m47_A Orotidine 5'-phosphate 81.3 3 0.0001 34.5 6.1 86 115-225 13-101 (228)
252 3na8_A Putative dihydrodipicol 81.2 3 0.0001 36.2 6.4 55 114-180 93-148 (315)
253 4h3d_A 3-dehydroquinate dehydr 81.1 13 0.00043 31.2 10.2 90 114-224 18-122 (258)
254 2rfg_A Dihydrodipicolinate syn 80.9 3.2 0.00011 35.6 6.5 55 114-180 69-124 (297)
255 2og9_A Mandelate racemase/muco 80.9 4.6 0.00016 35.9 7.7 71 125-219 162-238 (393)
256 2ojp_A DHDPS, dihydrodipicolin 80.8 3.5 0.00012 35.3 6.6 55 114-180 70-125 (292)
257 2vef_A Dihydropteroate synthas 80.8 2.4 8E-05 37.0 5.6 82 125-224 31-138 (314)
258 1q6o_A Humps, 3-keto-L-gulonat 80.8 4.7 0.00016 32.5 7.2 85 116-225 5-90 (216)
259 1dbt_A Orotidine 5'-phosphate 80.6 4.7 0.00016 33.3 7.2 81 116-225 5-91 (239)
260 1xky_A Dihydrodipicolinate syn 80.6 3.1 0.00011 35.8 6.3 55 114-180 81-136 (301)
261 3i4k_A Muconate lactonizing en 80.5 7.5 0.00026 34.4 9.0 82 115-220 138-226 (383)
262 1tx2_A DHPS, dihydropteroate s 80.5 3.1 0.0001 36.0 6.2 82 125-224 61-168 (297)
263 1nsj_A PRAI, phosphoribosyl an 80.5 3.4 0.00012 33.6 6.2 68 96-179 137-204 (205)
264 2poz_A Putative dehydratase; o 80.5 2.6 8.8E-05 37.4 5.9 87 124-219 136-230 (392)
265 2zad_A Muconate cycloisomerase 80.3 7.2 0.00025 33.8 8.7 79 115-219 129-215 (345)
266 4fo4_A Inosine 5'-monophosphat 80.2 3.1 0.0001 37.0 6.2 78 132-223 163-241 (366)
267 1q7z_A 5-methyltetrahydrofolat 80.0 5.7 0.0002 37.4 8.3 78 125-225 338-441 (566)
268 4aaj_A N-(5'-phosphoribosyl)an 79.9 3.5 0.00012 34.2 6.1 65 97-180 161-226 (228)
269 3tr9_A Dihydropteroate synthas 79.8 3.5 0.00012 35.9 6.3 84 124-225 46-158 (314)
270 2vp8_A Dihydropteroate synthas 79.7 3.3 0.00011 36.2 6.1 81 125-224 63-169 (318)
271 4e5t_A Mandelate racemase / mu 79.7 3.8 0.00013 36.7 6.8 84 124-220 150-240 (404)
272 1o5k_A DHDPS, dihydrodipicolin 79.6 3.5 0.00012 35.5 6.3 55 114-180 81-136 (306)
273 2ehh_A DHDPS, dihydrodipicolin 79.6 2.7 9.3E-05 36.0 5.6 55 114-180 69-124 (294)
274 3l21_A DHDPS, dihydrodipicolin 79.5 3.2 0.00011 35.8 6.0 55 114-180 84-139 (304)
275 2r8w_A AGR_C_1641P; APC7498, d 79.5 3.6 0.00012 36.0 6.4 55 114-180 103-158 (332)
276 2v9d_A YAGE; dihydrodipicolini 79.3 2.9 9.8E-05 36.8 5.7 55 114-180 100-155 (343)
277 3m5v_A DHDPS, dihydrodipicolin 79.3 3.2 0.00011 35.6 6.0 55 114-180 77-132 (301)
278 3flu_A DHDPS, dihydrodipicolin 79.2 3.5 0.00012 35.4 6.1 33 114-146 76-109 (297)
279 3sjn_A Mandelate racemase/muco 79.2 5.2 0.00018 35.3 7.4 73 125-219 146-225 (374)
280 1ofd_A Ferredoxin-dependent gl 78.9 6.3 0.00022 41.3 8.8 93 114-225 1028-1130(1520)
281 3qze_A DHDPS, dihydrodipicolin 78.8 3.6 0.00012 35.6 6.2 33 114-146 92-125 (314)
282 2hmc_A AGR_L_411P, dihydrodipi 78.8 3.9 0.00013 36.0 6.4 54 114-179 92-147 (344)
283 2qiw_A PEP phosphonomutase; st 78.5 12 0.0004 31.5 9.1 94 114-225 80-191 (255)
284 1tkk_A Similar to chloromucona 78.5 5.3 0.00018 34.9 7.3 76 115-214 130-210 (366)
285 2zbt_A Pyridoxal biosynthesis 78.5 5.2 0.00018 33.9 7.0 48 10-64 37-84 (297)
286 1zco_A 2-dehydro-3-deoxyphosph 78.5 3 0.0001 35.3 5.4 47 98-148 118-167 (262)
287 2qjg_A Putative aldolase MJ040 78.4 9.3 0.00032 31.7 8.5 81 114-226 145-240 (273)
288 2pgw_A Muconate cycloisomerase 78.4 17 0.00058 31.9 10.6 78 114-221 190-270 (384)
289 3fkr_A L-2-keto-3-deoxyarabona 78.3 3.9 0.00013 35.3 6.2 33 114-146 77-110 (309)
290 3bjs_A Mandelate racemase/muco 78.3 5.6 0.00019 35.9 7.4 71 124-219 183-260 (428)
291 2yxg_A DHDPS, dihydrodipicolin 78.2 3.6 0.00012 35.1 5.9 55 114-180 69-124 (289)
292 3r12_A Deoxyribose-phosphate a 78.2 9.4 0.00032 32.3 8.3 99 99-221 79-192 (260)
293 3usb_A Inosine-5'-monophosphat 78.0 4.4 0.00015 37.5 6.8 70 125-221 254-324 (511)
294 2w6r_A Imidazole glycerol phos 77.9 2.2 7.5E-05 35.5 4.3 62 98-179 187-248 (266)
295 3tak_A DHDPS, dihydrodipicolin 77.9 4.8 0.00016 34.4 6.6 33 114-146 70-103 (291)
296 1f6k_A N-acetylneuraminate lya 77.5 3.3 0.00011 35.4 5.4 33 114-146 73-106 (293)
297 2htm_A Thiazole biosynthesis p 77.5 5.9 0.0002 33.7 6.8 70 131-222 136-207 (268)
298 1w8s_A FBP aldolase, fructose- 77.5 9.5 0.00032 32.0 8.3 89 114-229 138-237 (263)
299 3si9_A DHDPS, dihydrodipicolin 77.5 4.2 0.00014 35.2 6.2 33 114-146 91-124 (315)
300 1ea0_A Glutamate synthase [NAD 77.4 7.7 0.00026 40.6 8.9 93 114-225 993-1095(1479)
301 3gd6_A Muconate cycloisomerase 77.4 8.7 0.0003 34.1 8.4 81 115-220 128-221 (391)
302 1eye_A DHPS 1, dihydropteroate 77.3 4.2 0.00014 34.8 6.0 84 125-224 27-133 (280)
303 3ngj_A Deoxyribose-phosphate a 77.0 8.3 0.00028 32.2 7.6 103 99-221 63-176 (239)
304 3jva_A Dipeptide epimerase; en 77.0 7 0.00024 34.2 7.6 80 116-220 130-215 (354)
305 3cpr_A Dihydrodipicolinate syn 77.0 3.7 0.00013 35.3 5.7 55 114-180 85-140 (304)
306 3daq_A DHDPS, dihydrodipicolin 76.8 3.8 0.00013 35.0 5.6 33 114-146 71-104 (292)
307 3noy_A 4-hydroxy-3-methylbut-2 76.4 13 0.00046 32.9 9.0 78 114-222 29-112 (366)
308 2o56_A Putative mandelate race 76.3 7.5 0.00026 34.5 7.7 84 125-220 152-247 (407)
309 2wkj_A N-acetylneuraminate lya 76.3 3.5 0.00012 35.5 5.3 55 114-180 80-135 (303)
310 1aj0_A DHPS, dihydropteroate s 76.2 4.4 0.00015 34.7 5.8 82 125-224 36-142 (282)
311 2pcq_A Putative dihydrodipicol 76.0 3 0.0001 35.5 4.7 57 89-146 38-95 (283)
312 1qwg_A PSL synthase;, (2R)-pho 76.0 34 0.0012 28.7 11.5 37 203-239 148-186 (251)
313 3q45_A Mandelate racemase/muco 76.0 14 0.00047 32.4 9.2 80 116-220 131-216 (368)
314 3gk0_A PNP synthase, pyridoxin 75.9 1.9 6.4E-05 36.8 3.3 24 203-226 53-77 (278)
315 1m5w_A Pyridoxal phosphate bio 75.9 1.8 6.2E-05 36.3 3.2 25 202-226 24-49 (243)
316 1ub3_A Aldolase protein; schif 75.8 13 0.00044 30.5 8.4 73 129-221 74-152 (220)
317 2pp0_A L-talarate/galactarate 75.7 8 0.00027 34.4 7.7 71 125-219 175-251 (398)
318 3igs_A N-acetylmannosamine-6-p 75.2 16 0.00054 30.1 8.9 95 99-221 114-209 (232)
319 3b4u_A Dihydrodipicolinate syn 75.2 5.7 0.0002 33.9 6.3 33 114-146 72-105 (294)
320 1h5y_A HISF; histidine biosynt 75.0 2.1 7.3E-05 34.8 3.4 31 192-223 76-107 (253)
321 3ru6_A Orotidine 5'-phosphate 74.9 21 0.00071 30.8 9.8 85 115-224 25-112 (303)
322 3d0c_A Dihydrodipicolinate syn 74.8 6.6 0.00023 33.9 6.7 54 114-180 81-135 (314)
323 1tqx_A D-ribulose-5-phosphate 74.7 3.6 0.00012 34.0 4.7 82 117-225 8-95 (227)
324 1u83_A Phosphosulfolactate syn 74.7 6.4 0.00022 33.6 6.3 95 129-239 112-209 (276)
325 3a5f_A Dihydrodipicolinate syn 74.6 3.8 0.00013 35.0 5.0 33 114-146 70-103 (291)
326 3bw2_A 2-nitropropane dioxygen 74.6 11 0.00036 33.2 8.1 95 100-225 135-239 (369)
327 3tfx_A Orotidine 5'-phosphate 74.5 9.8 0.00033 32.1 7.5 82 115-224 5-92 (259)
328 1y0e_A Putative N-acetylmannos 74.3 6.3 0.00021 31.7 6.1 97 101-224 108-205 (223)
329 1qo2_A Molecule: N-((5-phospho 74.2 6.4 0.00022 32.2 6.2 74 128-225 145-225 (241)
330 3s5o_A 4-hydroxy-2-oxoglutarat 74.1 7.3 0.00025 33.5 6.7 33 114-146 83-116 (307)
331 3fv9_G Mandelate racemase/muco 74.1 20 0.00069 31.6 9.9 85 114-219 134-225 (386)
332 2gjl_A Hypothetical protein PA 74.0 7.8 0.00027 33.4 7.0 84 114-224 118-202 (328)
333 1ka9_F Imidazole glycerol phos 73.8 12 0.0004 30.6 7.8 73 129-225 154-227 (252)
334 3q58_A N-acetylmannosamine-6-p 73.4 15 0.00053 30.1 8.4 95 99-221 114-209 (229)
335 2nuw_A 2-keto-3-deoxygluconate 73.2 14 0.00047 31.4 8.2 30 117-146 68-98 (288)
336 3my9_A Muconate cycloisomerase 73.0 18 0.00062 31.7 9.3 81 115-219 136-222 (377)
337 3tji_A Mandelate racemase/muco 73.0 24 0.00083 31.6 10.2 97 115-220 144-254 (422)
338 2yyu_A Orotidine 5'-phosphate 72.9 9.7 0.00033 31.5 7.1 81 116-225 6-92 (246)
339 4hb7_A Dihydropteroate synthas 72.8 12 0.00041 31.8 7.6 87 125-227 28-137 (270)
340 2dqw_A Dihydropteroate synthas 72.7 3.2 0.00011 35.9 4.0 84 125-224 50-155 (294)
341 3i6e_A Muconate cycloisomerase 72.7 26 0.0009 30.8 10.3 80 115-219 138-223 (385)
342 3h5d_A DHDPS, dihydrodipicolin 72.7 5.4 0.00019 34.4 5.6 55 114-180 76-132 (311)
343 4e4u_A Mandalate racemase/muco 72.4 10 0.00035 34.0 7.5 84 124-220 143-233 (412)
344 1vrd_A Inosine-5'-monophosphat 72.4 7.9 0.00027 35.4 6.9 63 131-221 241-305 (494)
345 2hxt_A L-fuconate dehydratase; 72.1 8.7 0.0003 34.6 7.1 70 125-219 198-273 (441)
346 3qfe_A Putative dihydrodipicol 72.1 6.6 0.00023 34.0 6.0 32 114-145 80-112 (318)
347 3tr2_A Orotidine 5'-phosphate 71.2 7.1 0.00024 32.5 5.8 33 192-224 60-95 (239)
348 1me8_A Inosine-5'-monophosphat 70.4 5.6 0.00019 36.7 5.5 92 127-225 293-384 (503)
349 1w3i_A EDA, 2-keto-3-deoxy glu 70.2 14 0.00049 31.3 7.7 52 117-180 68-121 (293)
350 2qq6_A Mandelate racemase/muco 70.0 12 0.00042 33.2 7.5 82 125-220 149-242 (410)
351 1o60_A 2-dehydro-3-deoxyphosph 69.9 13 0.00044 31.9 7.3 46 99-148 121-169 (292)
352 3dz1_A Dihydrodipicolinate syn 69.8 12 0.0004 32.3 7.1 54 114-180 76-130 (313)
353 3ndo_A Deoxyribose-phosphate a 69.6 22 0.00076 29.4 8.4 69 129-221 83-165 (231)
354 3v3w_A Starvation sensing prot 69.5 31 0.0011 30.9 10.1 93 115-219 139-257 (424)
355 3ldv_A Orotidine 5'-phosphate 69.5 7.5 0.00026 32.7 5.6 84 115-224 28-114 (255)
356 2uva_G Fatty acid synthase bet 69.4 28 0.00095 37.9 11.0 123 66-220 584-721 (2060)
357 3e96_A Dihydrodipicolinate syn 69.2 7.3 0.00025 33.6 5.7 54 114-180 81-135 (316)
358 1zco_A 2-dehydro-3-deoxyphosph 69.2 3.2 0.00011 35.1 3.2 135 34-180 112-258 (262)
359 3ddm_A Putative mandelate race 68.6 11 0.00036 33.6 6.7 73 123-220 153-231 (392)
360 1vcv_A Probable deoxyribose-ph 68.4 12 0.0004 31.0 6.5 74 129-221 70-147 (226)
361 2yr1_A 3-dehydroquinate dehydr 67.8 34 0.0012 28.5 9.4 89 115-225 19-124 (257)
362 1sfl_A 3-dehydroquinate dehydr 67.8 35 0.0012 28.0 9.4 87 117-225 6-107 (238)
363 1v5x_A PRA isomerase, phosphor 67.8 8.8 0.0003 31.1 5.5 67 97-180 133-199 (203)
364 4gj1_A 1-(5-phosphoribosyl)-5- 67.8 50 0.0017 27.1 10.5 94 99-222 63-171 (243)
365 3toy_A Mandelate racemase/muco 67.6 30 0.001 30.5 9.5 81 115-219 157-244 (383)
366 2oz8_A MLL7089 protein; struct 66.9 23 0.0008 31.2 8.6 69 125-217 145-219 (389)
367 3ugv_A Enolase; enzyme functio 66.7 23 0.00078 31.4 8.5 81 115-219 158-250 (390)
368 1vs1_A 3-deoxy-7-phosphoheptul 66.3 7.8 0.00027 33.0 5.1 27 114-140 145-173 (276)
369 3dg3_A Muconate cycloisomerase 65.9 16 0.00053 32.1 7.2 81 115-220 129-217 (367)
370 2h9a_B CO dehydrogenase/acetyl 65.5 20 0.00069 31.0 7.6 74 132-224 80-182 (310)
371 2qkf_A 3-deoxy-D-manno-octulos 64.9 19 0.00064 30.6 7.3 35 114-148 129-166 (280)
372 1ydn_A Hydroxymethylglutaryl-C 64.8 45 0.0015 28.0 9.7 74 124-221 152-230 (295)
373 2r91_A 2-keto-3-deoxy-(6-phosp 64.5 15 0.0005 31.2 6.5 52 117-180 67-120 (286)
374 2qgy_A Enolase from the enviro 64.2 41 0.0014 29.6 9.7 78 114-221 194-274 (391)
375 2rdx_A Mandelate racemase/muco 64.1 31 0.0011 30.1 8.9 24 115-138 190-214 (379)
376 3vcn_A Mannonate dehydratase; 64.1 23 0.00078 31.8 8.1 97 115-220 140-259 (425)
377 1rvk_A Isomerase/lactonizing e 63.7 54 0.0019 28.5 10.4 78 114-221 200-281 (382)
378 4eiv_A Deoxyribose-phosphate a 62.5 17 0.00059 31.3 6.5 69 128-220 102-184 (297)
379 2ovl_A Putative racemase; stru 62.5 28 0.00097 30.3 8.2 48 114-176 191-240 (371)
380 3tj4_A Mandelate racemase; eno 62.4 31 0.0011 30.2 8.5 71 125-219 151-228 (372)
381 1vc4_A Indole-3-glycerol phosp 62.3 46 0.0016 27.6 9.1 72 127-224 65-137 (254)
382 3nvt_A 3-deoxy-D-arabino-heptu 62.3 41 0.0014 29.9 9.3 96 114-229 249-355 (385)
383 3qw3_A Orotidine-5-phosphate d 62.0 36 0.0012 28.4 8.4 91 115-225 14-114 (255)
384 3eww_A Ompdecase, orotidine-5' 61.9 52 0.0018 27.6 9.4 86 115-224 32-125 (260)
385 2yw3_A 4-hydroxy-2-oxoglutarat 61.3 41 0.0014 26.9 8.4 38 115-152 13-51 (207)
386 3vzx_A Heptaprenylglyceryl pho 60.5 10 0.00034 31.5 4.6 61 99-179 167-227 (228)
387 2ftp_A Hydroxymethylglutaryl-C 60.4 57 0.002 27.6 9.6 75 124-221 156-234 (302)
388 1mdl_A Mandelate racemase; iso 60.4 30 0.001 29.9 8.0 77 115-221 190-269 (359)
389 3lab_A Putative KDPG (2-keto-3 60.3 43 0.0015 27.4 8.4 34 115-148 13-47 (217)
390 1m3u_A 3-methyl-2-oxobutanoate 59.6 24 0.00081 29.9 6.8 23 203-225 161-184 (264)
391 3t6c_A RSPA, putative MAND fam 59.4 66 0.0023 28.9 10.3 97 115-220 145-272 (440)
392 1vzw_A Phosphoribosyl isomeras 58.8 12 0.00042 30.4 4.9 32 192-224 74-106 (244)
393 1lt8_A Betaine-homocysteine me 58.7 21 0.00071 32.1 6.7 35 114-148 178-218 (406)
394 2nql_A AGR_PAT_674P, isomerase 58.4 31 0.0011 30.3 7.8 78 114-221 208-288 (388)
395 1q7z_A 5-methyltetrahydrofolat 58.3 20 0.00068 33.7 6.7 51 114-180 167-224 (566)
396 2hjp_A Phosphonopyruvate hydro 58.3 18 0.0006 31.0 5.9 79 133-225 28-113 (290)
397 1ofd_A Ferredoxin-dependent gl 58.3 15 0.0005 38.6 6.2 51 165-225 1010-1062(1520)
398 2pcq_A Putative dihydrodipicol 58.3 30 0.001 29.1 7.4 74 125-222 17-95 (283)
399 1ea0_A Glutamate synthase [NAD 58.0 15 0.00052 38.4 6.2 50 165-224 975-1026(1479)
400 1chr_A Chloromuconate cycloiso 57.9 35 0.0012 29.8 8.0 81 115-219 132-219 (370)
401 4e8g_A Enolase, mandelate race 57.6 17 0.00059 32.2 6.0 81 115-219 154-240 (391)
402 1nvm_A HOA, 4-hydroxy-2-oxoval 57.4 24 0.00083 30.6 6.8 79 125-222 28-113 (345)
403 2og9_A Mandelate racemase/muco 57.3 53 0.0018 28.9 9.1 78 114-221 207-287 (393)
404 3p6l_A Sugar phosphate isomera 57.2 44 0.0015 26.8 8.1 94 117-223 12-112 (262)
405 3bo9_A Putative nitroalkan dio 56.7 19 0.00066 31.0 6.0 50 165-225 60-112 (326)
406 4hnl_A Mandelate racemase/muco 56.5 75 0.0026 28.1 10.1 98 115-219 143-252 (421)
407 3qw4_B UMP synthase; N-termina 56.3 38 0.0013 30.7 8.2 30 196-225 82-115 (453)
408 1vr6_A Phospho-2-dehydro-3-deo 56.0 37 0.0013 29.8 7.7 43 99-145 202-246 (350)
409 3go2_A Putative L-alanine-DL-g 55.9 59 0.002 28.8 9.3 76 114-221 213-291 (409)
410 1twd_A Copper homeostasis prot 55.0 52 0.0018 27.6 8.1 76 121-223 6-94 (256)
411 3mcm_A 2-amino-4-hydroxy-6-hyd 55.0 31 0.0011 31.4 7.2 88 125-225 210-325 (442)
412 1ydo_A HMG-COA lyase; TIM-barr 54.6 66 0.0023 27.4 9.0 74 124-220 154-231 (307)
413 3oa3_A Aldolase; structural ge 54.4 40 0.0014 28.8 7.5 72 125-219 186-260 (288)
414 2gdq_A YITF; mandelate racemas 54.4 35 0.0012 29.9 7.4 81 115-219 124-216 (382)
415 3stp_A Galactonate dehydratase 54.3 44 0.0015 29.8 8.1 77 115-221 231-310 (412)
416 3paj_A Nicotinate-nucleotide p 54.0 19 0.00064 31.4 5.4 62 130-223 242-304 (320)
417 3epo_A Thiamine biosynthesis p 54.0 32 0.0011 32.2 7.1 23 203-225 293-316 (612)
418 4e38_A Keto-hydroxyglutarate-a 53.8 52 0.0018 27.1 7.9 34 115-148 34-68 (232)
419 3l0g_A Nicotinate-nucleotide p 53.5 23 0.0008 30.5 5.8 70 115-221 208-278 (300)
420 1nu5_A Chloromuconate cycloiso 53.2 83 0.0029 27.1 9.7 20 125-144 200-220 (370)
421 3noy_A 4-hydroxy-3-methylbut-2 52.5 35 0.0012 30.2 6.9 80 114-223 84-184 (366)
422 3vk5_A MOEO5; TIM barrel, tran 52.2 20 0.00067 30.8 5.1 59 100-176 214-274 (286)
423 2cw6_A Hydroxymethylglutaryl-C 52.1 76 0.0026 26.7 9.0 73 125-220 154-230 (298)
424 1yxy_A Putative N-acetylmannos 51.9 15 0.0005 29.7 4.2 66 134-226 96-166 (234)
425 3tqv_A Nicotinate-nucleotide p 51.8 21 0.00071 30.6 5.2 63 129-223 208-271 (287)
426 3ble_A Citramalate synthase fr 51.6 81 0.0028 27.2 9.2 73 125-220 167-243 (337)
427 2z6i_A Trans-2-enoyl-ACP reduc 51.6 23 0.00077 30.5 5.6 50 165-225 46-98 (332)
428 2bmb_A Folic acid synthesis pr 50.9 22 0.00075 33.3 5.7 90 125-224 247-365 (545)
429 2ze3_A DFA0005; organic waste 50.8 29 0.00098 29.4 6.0 78 133-225 29-115 (275)
430 3aam_A Endonuclease IV, endoiv 50.7 45 0.0015 27.0 7.1 77 128-223 15-109 (270)
431 3iwp_A Copper homeostasis prot 50.5 39 0.0013 28.9 6.8 82 117-225 40-134 (287)
432 3sz8_A 2-dehydro-3-deoxyphosph 50.5 51 0.0018 28.1 7.5 35 114-148 134-171 (285)
433 3i4k_A Muconate lactonizing en 50.2 61 0.0021 28.4 8.3 29 193-221 245-274 (383)
434 3gnn_A Nicotinate-nucleotide p 50.0 17 0.00057 31.4 4.4 64 130-225 220-284 (298)
435 1vcv_A Probable deoxyribose-ph 49.9 38 0.0013 27.8 6.4 33 116-148 117-150 (226)
436 3lmz_A Putative sugar isomeras 49.7 86 0.0029 25.1 8.7 73 128-223 31-110 (257)
437 1oy0_A Ketopantoate hydroxymet 49.5 36 0.0012 29.0 6.4 23 203-225 179-202 (281)
438 2pp0_A L-talarate/galactarate 49.4 69 0.0024 28.2 8.6 77 115-221 221-300 (398)
439 1o66_A 3-methyl-2-oxobutanoate 49.2 35 0.0012 29.0 6.2 68 125-223 93-182 (275)
440 1wv2_A Thiazole moeity, thiazo 49.1 13 0.00045 31.5 3.5 45 98-148 174-218 (265)
441 4adt_A Pyridoxine biosynthetic 48.7 37 0.0013 29.1 6.4 45 164-224 193-239 (297)
442 3o6c_A PNP synthase, pyridoxin 48.6 9 0.00031 32.4 2.4 24 202-226 24-48 (260)
443 3g3d_A UMP synthase, uridine 5 48.5 74 0.0025 27.4 8.3 86 115-224 84-177 (312)
444 3qtg_A Pyruvate kinase, PK; TI 48.5 49 0.0017 30.3 7.4 91 115-229 225-329 (461)
445 2ffc_A Orotidine 5-monophospha 48.1 30 0.001 30.5 5.9 69 138-225 127-199 (353)
446 3vk5_A MOEO5; TIM barrel, tran 48.1 30 0.001 29.6 5.6 50 126-201 52-104 (286)
447 2o56_A Putative mandelate race 48.0 77 0.0026 27.8 8.7 78 114-221 215-295 (407)
448 1s2w_A Phosphoenolpyruvate pho 47.9 31 0.001 29.6 5.8 78 133-225 32-117 (295)
449 4e4f_A Mannonate dehydratase; 47.7 1E+02 0.0034 27.5 9.4 97 115-220 139-260 (426)
450 3eoo_A Methylisocitrate lyase; 47.1 38 0.0013 29.0 6.2 80 133-226 35-122 (298)
451 1xg4_A Probable methylisocitra 46.9 38 0.0013 29.0 6.2 80 133-225 30-117 (295)
452 2a4a_A Deoxyribose-phosphate a 46.8 33 0.0011 29.2 5.7 70 129-220 109-190 (281)
453 3vav_A 3-methyl-2-oxobutanoate 46.8 93 0.0032 26.3 8.5 80 132-224 41-128 (275)
454 3b8i_A PA4872 oxaloacetate dec 46.6 33 0.0011 29.2 5.8 81 132-225 33-120 (287)
455 3tsm_A IGPS, indole-3-glycerol 46.6 65 0.0022 27.1 7.6 72 128-225 80-152 (272)
456 2q02_A Putative cytoplasmic pr 46.4 1E+02 0.0034 24.6 8.6 21 204-224 86-107 (272)
457 3ngj_A Deoxyribose-phosphate a 46.3 31 0.0011 28.7 5.4 69 125-219 155-226 (239)
458 3jva_A Dipeptide epimerase; en 46.2 67 0.0023 27.7 7.8 30 192-221 233-263 (354)
459 3lg3_A Isocitrate lyase; conse 45.8 1.1E+02 0.0036 27.8 9.1 35 115-149 153-190 (435)
460 3rcy_A Mandelate racemase/muco 45.7 80 0.0028 28.3 8.5 78 114-221 203-283 (433)
461 2qde_A Mandelate racemase/muco 45.6 92 0.0031 27.3 8.8 30 115-144 190-221 (397)
462 3mqt_A Mandelate racemase/muco 45.4 68 0.0023 28.2 7.9 30 192-221 251-281 (394)
463 3ozy_A Putative mandelate race 45.4 51 0.0018 29.0 7.1 30 192-221 246-276 (389)
464 1zlp_A PSR132, petal death pro 45.4 42 0.0014 29.1 6.3 80 133-225 52-139 (318)
465 2gl5_A Putative dehydratase pr 45.4 66 0.0022 28.3 7.8 31 114-144 218-250 (410)
466 3mkc_A Racemase; metabolic pro 45.3 76 0.0026 27.9 8.2 30 192-221 256-286 (394)
467 2hzg_A Mandelate racemase/muco 45.1 58 0.002 28.6 7.4 30 115-144 194-227 (401)
468 2poz_A Putative dehydratase; o 44.2 76 0.0026 27.7 8.0 48 114-176 199-248 (392)
469 3kts_A Glycerol uptake operon 44.1 62 0.0021 25.9 6.7 141 41-225 39-182 (192)
470 1nvm_A HOA, 4-hydroxy-2-oxoval 44.0 1.2E+02 0.0041 26.1 9.2 76 101-200 120-201 (345)
471 4djd_D C/Fe-SP, corrinoid/iron 43.9 61 0.0021 28.1 7.1 52 129-199 82-135 (323)
472 3sjn_A Mandelate racemase/muco 43.8 67 0.0023 28.0 7.5 30 192-221 244-274 (374)
473 3eez_A Putative mandelate race 43.8 70 0.0024 28.0 7.6 30 192-221 236-266 (378)
474 3f4w_A Putative hexulose 6 pho 43.8 1.1E+02 0.0038 23.7 10.2 94 100-224 41-136 (211)
475 3fcp_A L-Ala-D/L-Glu epimerase 43.7 1.1E+02 0.0037 26.7 8.9 81 115-219 137-224 (381)
476 3l52_A Orotidine 5'-phosphate 43.4 42 0.0014 28.6 5.8 47 167-225 81-136 (284)
477 2ox4_A Putative mandelate race 43.2 66 0.0023 28.2 7.4 78 114-221 209-289 (403)
478 4dpp_A DHDPS 2, dihydrodipicol 43.2 10 0.00034 33.6 2.0 58 114-183 128-186 (360)
479 2ocz_A 3-dehydroquinate dehydr 42.8 32 0.0011 28.2 4.9 82 117-225 6-102 (231)
480 3vav_A 3-methyl-2-oxobutanoate 42.4 1.4E+02 0.0048 25.2 9.0 90 115-224 91-195 (275)
481 1pii_A N-(5'phosphoribosyl)ant 42.2 23 0.00078 32.3 4.2 68 93-179 384-451 (452)
482 3dgb_A Muconate cycloisomerase 42.1 72 0.0025 27.9 7.5 81 115-219 138-225 (382)
483 3ih1_A Methylisocitrate lyase; 42.0 33 0.0011 29.5 5.1 80 132-225 41-127 (305)
484 1viz_A PCRB protein homolog; s 41.9 24 0.00083 29.3 4.1 60 100-180 170-230 (240)
485 1wbh_A KHG/KDPG aldolase; lyas 41.8 1.2E+02 0.0041 24.3 8.2 33 115-147 16-49 (214)
486 1p1x_A Deoxyribose-phosphate a 41.8 28 0.00095 29.3 4.4 73 129-221 88-169 (260)
487 3fs2_A 2-dehydro-3-deoxyphosph 41.6 82 0.0028 27.0 7.4 102 93-222 138-262 (298)
488 4drs_A Pyruvate kinase; glycol 41.6 44 0.0015 31.1 6.1 91 115-229 265-369 (526)
489 1vli_A Spore coat polysacchari 40.9 76 0.0026 28.2 7.4 45 163-223 144-193 (385)
490 3g8r_A Probable spore coat pol 40.7 93 0.0032 27.3 7.8 89 100-224 77-170 (350)
491 2p8b_A Mandelate racemase/muco 40.6 77 0.0026 27.3 7.4 20 125-144 197-218 (369)
492 3w01_A Heptaprenylglyceryl pho 40.6 14 0.00048 30.7 2.3 61 99-179 173-233 (235)
493 1rd5_A Tryptophan synthase alp 40.5 1.5E+02 0.005 24.1 12.8 42 170-222 189-230 (262)
494 4a35_A Mitochondrial enolase s 40.4 46 0.0016 30.0 6.0 73 124-219 200-276 (441)
495 3ewb_X 2-isopropylmalate synth 40.3 51 0.0017 28.0 5.9 73 125-223 25-101 (293)
496 3n3m_A Orotidine 5'-phosphate 40.1 46 0.0016 29.2 5.7 75 132-225 109-187 (342)
497 3tcs_A Racemase, putative; PSI 39.8 81 0.0028 27.8 7.4 78 125-219 146-230 (388)
498 2qq6_A Mandelate racemase/muco 39.7 1.1E+02 0.0039 26.7 8.5 32 114-145 210-243 (410)
499 2nwr_A 2-dehydro-3-deoxyphosph 39.7 61 0.0021 27.2 6.3 100 93-221 101-221 (267)
500 3tsm_A IGPS, indole-3-glycerol 39.6 1.7E+02 0.0057 24.5 9.7 93 99-227 108-201 (272)
No 1
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.84 E-value=1.5e-20 Score=167.23 Aligned_cols=158 Identities=14% Similarity=0.140 Sum_probs=124.3
Q ss_pred ecccccccCCCccccccCchhhhhhhhcccceeeeCC----------hhhHHHhhhcccCCCCceeEEeecCCHHHHHHH
Q psy7344 63 MGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDD----------WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEA 132 (240)
Q Consensus 63 vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l~~d----------~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~a 132 (240)
++.+.+++||.+++|.+|+ ......| .|...+.. ....+.+ +.+.+.|+++||+|++++.+.++
T Consensus 3 l~nri~~APM~~~t~~~~r--~~~~~~G-~gli~te~~~~~~~~~~~~~~~~~l---~~~~~~~~~~QL~g~~~~~~~~a 76 (318)
T 1vhn_A 3 LEVKVGLAPMAGYTDSAFR--TLAFEWG-ADFAFSEMVSAKGFLMNSQKTEELL---PQPHERNVAVQIFGSEPNELSEA 76 (318)
T ss_dssp --CEEEECCCTTTCSHHHH--HHHHTTT-CCCEECSCEEHHHHHTTCHHHHHHS---CCTTCTTEEEEEECSCHHHHHHH
T ss_pred cCCCEEECCCCCCCcHHHH--HHHHHHC-cCEEEeCCEEEcccccCCHhHHHhh---hCcCCCeEEEEeCCCCHHHHHHH
Confidence 4566788999999988886 3333332 23322211 1111222 34456899999999999999999
Q ss_pred HHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh----hcHHHH
Q psy7344 133 AKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV----AKRGHY 208 (240)
Q Consensus 133 a~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~----~~~~~~ 208 (240)
++.+++.+|+||||+|||+......++|++|+.+|+.+.++++++++. .++||++|+|. ++..++
T Consensus 77 a~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~-----------~~~pv~vKir~G~~~~~~~~~ 145 (318)
T 1vhn_A 77 ARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKS-----------VSGKFSVKTRLGWEKNEVEEI 145 (318)
T ss_dssp HHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHH-----------CSSEEEEEEESCSSSCCHHHH
T ss_pred HHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHh-----------hCCCEEEEecCCCChHHHHHH
Confidence 999976699999999999988888899999999999999999999998 67899999993 345699
Q ss_pred HHHHhC-CCCeEEEecccccccCCCCCCCCCC
Q psy7344 209 GAYLQD-DWPLLTELGKMAMLVGILDNTGSWT 239 (240)
Q Consensus 209 ~~~l~~-G~~~itih~R~~~~~~~~~~~adw~ 239 (240)
++.+++ |+|+|++|+|++.+. |+++++|+
T Consensus 146 a~~l~~~G~d~i~v~g~~~~~~--~~~~~~~~ 175 (318)
T 1vhn_A 146 YRILVEEGVDEVFIHTRTVVQS--FTGRAEWK 175 (318)
T ss_dssp HHHHHHTTCCEEEEESSCTTTT--TSSCCCGG
T ss_pred HHHHHHhCCCEEEEcCCCcccc--CCCCcCHH
Confidence 999999 999999999999887 46888885
No 2
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.83 E-value=1.8e-20 Score=169.02 Aligned_cols=153 Identities=21% Similarity=0.290 Sum_probs=121.3
Q ss_pred ecccccccCCCccccccCchhhhhhhhcccceeeeCC---hhhHH----HhhhcccCCCCceeEEeecCCHHHHHHHHHH
Q psy7344 63 MGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDD---WPLLT----ELGFKTRSHMCGHSLMFCGNDSKNLTEAAKL 135 (240)
Q Consensus 63 vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l~~d---~eli~----~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~ 135 (240)
++.+.+++||.+.+|..|+ ......|+.|...+.- ..++. ++. .+.+.+.|+++||+|++++++.+++++
T Consensus 2 l~nriv~APM~g~td~~~r--~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~-~~~~~~~p~~vQL~g~~p~~~~~aA~~ 78 (350)
T 3b0p_A 2 LDPRLSVAPMVDRTDRHFR--FLVRQVSLGVRLYTEMTVDQAVLRGNRERLL-AFRPEEHPIALQLAGSDPKSLAEAARI 78 (350)
T ss_dssp CCCSEEECCCTTTSSHHHH--HHHHHHCSSSBEECCCEEHHHHHHSCHHHHH-CCCGGGCSEEEEEECSCHHHHHHHHHH
T ss_pred CCCCEEECCCCCCCHHHHH--HHHHHcCCCCEEEeCCEEechhhcCCHHHHh-ccCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 3456788999999999997 4444455544433211 12222 222 234456899999999999999999999
Q ss_pred Hcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh--h------cHH
Q psy7344 136 AEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV--A------KRG 206 (240)
Q Consensus 136 le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~--~------~~~ 206 (240)
+++ |+|+||||+|||+....+.++|++|+.+|+.+.++++++++. .++||++|+|+ + ++.
T Consensus 79 a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~-----------v~~PV~vKiR~g~~~~~~~~~~~ 147 (350)
T 3b0p_A 79 GEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA-----------VRVPVTVKMRLGLEGKETYRGLA 147 (350)
T ss_dssp HHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH-----------CSSCEEEEEESCBTTCCCHHHHH
T ss_pred HHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH-----------hCCceEEEEecCcCccccHHHHH
Confidence 965 799999999999988888999999999999999999999998 67899999993 2 468
Q ss_pred HHHHHHhC-CCCeEEEeccccccc
Q psy7344 207 HYGAYLQD-DWPLLTELGKMAMLV 229 (240)
Q Consensus 207 ~~~~~l~~-G~~~itih~R~~~~~ 229 (240)
++++.+++ |+|+|++|+|++.+.
T Consensus 148 ~~a~~l~~aG~d~I~V~~r~~~~g 171 (350)
T 3b0p_A 148 QSVEAMAEAGVKVFVVHARSALLA 171 (350)
T ss_dssp HHHHHHHHTTCCEEEEECSCBC--
T ss_pred HHHHHHHHcCCCEEEEecCchhcc
Confidence 89999999 999999999998764
No 3
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.52 E-value=3.1e-14 Score=128.26 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=81.8
Q ss_pred CCceeEEeecCCHHHHHHHHHHHc---c-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAE---P-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHC 189 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le---~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~ 189 (240)
+.|+++||.|.+++++.++++.++ + ++|+||||+|||+.. | |+.|+.+|+.+.++++++++.
T Consensus 126 ~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~----g-g~~l~~~~e~~~~il~av~~~--------- 191 (354)
T 4ef8_A 126 KKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP----G-KPQVAYDFDAMRQCLTAVSEV--------- 191 (354)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST----T-SCCGGGSHHHHHHHHHHHHHH---------
T ss_pred CCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC----C-chhhccCHHHHHHHHHHHHHh---------
Confidence 579999999999999999999998 3 699999999999973 2 567889999999999999998
Q ss_pred CCCCeeeEEeeeh----hcHHHHHHHHhC-C-CCeEEEeccc
Q psy7344 190 DGNDINIGCPQMV----AKRGHYGAYLQD-D-WPLLTELGKM 225 (240)
Q Consensus 190 ~~~~~pvsvK~r~----~~~~~~~~~l~~-G-~~~itih~R~ 225 (240)
+++||++|+|. ..+.++++.+++ | +|+|++|+++
T Consensus 192 --~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 192 --YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp --CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred --hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 78999999992 234566777778 8 9999975543
No 4
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.49 E-value=9e-14 Score=125.85 Aligned_cols=104 Identities=9% Similarity=0.024 Sum_probs=83.9
Q ss_pred CCceeEEeecC-----CHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCC
Q psy7344 114 MCGHSLMFCGN-----DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPH 188 (240)
Q Consensus 114 ~~pvivqi~g~-----d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~ 188 (240)
..|+++||+++ +++++.++++.+.+.+|+|+||+|||+.. | ..++.+++.+.++++++++....+..
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~----G--~~~l~~~~~l~~ll~av~~~~~~~~~-- 217 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTA----G--LRSLQGKAELRRLLTKVLQERDGLRR-- 217 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST----T--GGGGGSHHHHHHHHHHHHHHHHTSCG--
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCC----C--ccccCCHHHHHHHHHHHHHHHhhccc--
Confidence 46999999886 68889999999988899999999999973 2 33679999999999998763110100
Q ss_pred CCCCCeeeEEeee--hh--cHHHHHHHHhC-CCCeEEEeccccc
Q psy7344 189 CDGNDINIGCPQM--VA--KRGHYGAYLQD-DWPLLTELGKMAM 227 (240)
Q Consensus 189 ~~~~~~pvsvK~r--~~--~~~~~~~~l~~-G~~~itih~R~~~ 227 (240)
..++||++|++ ++ ++.++++.+++ |+|+|++|+||..
T Consensus 218 --~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~ 259 (367)
T 3zwt_A 218 --VHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVS 259 (367)
T ss_dssp --GGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSC
T ss_pred --cCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcc
Confidence 04689999999 33 67889999999 9999999999954
No 5
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.46 E-value=1.3e-13 Score=123.77 Aligned_cols=93 Identities=13% Similarity=0.119 Sum_probs=79.9
Q ss_pred CCCceeEEeecCCHHHHHHHHHHHcc-CC-CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 113 HMCGHSLMFCGNDSKNLTEAAKLAEP-HC-DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 113 ~~~pvivqi~g~d~~~~~~aa~~le~-~~-d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
.+.|+++||+|.+++++.++++.+++ ++ |+||||+|||+.. | +++|+.||+.+.++++++++.
T Consensus 127 ~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~----G-~~~l~~~~e~l~~il~av~~~---------- 191 (345)
T 3oix_A 127 DSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP----G-XPQIAYDFETTDQILSEVFTY---------- 191 (345)
T ss_dssp TCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST----T-CCCGGGCHHHHHHHHHHHTTT----------
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC----C-chhhcCCHHHHHHHHHHHHHH----------
Confidence 35799999999999999999999975 55 5999999999974 2 477889999999999999998
Q ss_pred CCCeeeEEeeeh-hcHHHHHHHHhC-CCCeEEE
Q psy7344 191 GNDINIGCPQMV-AKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 191 ~~~~pvsvK~r~-~~~~~~~~~l~~-G~~~iti 221 (240)
+++||++|++. .+..++++.+++ |+++|++
T Consensus 192 -~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~ 223 (345)
T 3oix_A 192 -FTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTF 223 (345)
T ss_dssp -CCSCEEEEECCCCCHHHHHHHHHHHTTSCCSE
T ss_pred -hCCCeEEEECCCCCHHHHHHHHHHhCCCceEE
Confidence 78999999994 367888999888 8877653
No 6
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.45 E-value=1.9e-14 Score=129.59 Aligned_cols=133 Identities=20% Similarity=0.191 Sum_probs=95.3
Q ss_pred cccccCCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccccccCCC---ccccc-----c
Q psy7344 8 RIETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAEPHC---DGIDI-----N 79 (240)
Q Consensus 8 ~~~~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~lap~~---~~~dl-----~ 79 (240)
+.+.+.|+|.||||+|||+.++++.++|++|+++++++.+++.++. +..+.|+++|.+....... +..++ .
T Consensus 77 ~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~-~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~ 155 (350)
T 3b0p_A 77 RIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMG-EAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAE 155 (350)
T ss_dssp HHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHH-HHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHH-HHhCCceEEEEecCcCccccHHHHHHHHHHHHH
Confidence 3445678999999999999999999999999999999999999999 4668999987542111110 11111 4
Q ss_pred Cchhhhhhhhcccce-ee---------eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCC
Q psy7344 80 IGCPQMVAKRGHYGA-YL---------QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIG 148 (240)
Q Consensus 80 ~gC~~~i~~~g~~ga-~l---------~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~g 148 (240)
.| ...+.+|+++.. .+ ..+|+++.+++..+. +.||+++ +++.+..++.++++ |+|+|+++++
T Consensus 156 aG-~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~--~iPVian---GgI~s~eda~~~l~-GaD~V~iGRa 227 (350)
T 3b0p_A 156 AG-VKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP--QLTFVTN---GGIRSLEEALFHLK-RVDGVMLGRA 227 (350)
T ss_dssp TT-CCEEEEECSCBC----------CCCCCHHHHHHHHHHCT--TSEEEEE---SSCCSHHHHHHHHT-TSSEEEECHH
T ss_pred cC-CCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC--CCeEEEE---CCcCCHHHHHHHHh-CCCEEEECHH
Confidence 45 355667776532 11 136888888876541 3677765 77777777778887 8999999877
No 7
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.44 E-value=1e-13 Score=126.83 Aligned_cols=107 Identities=11% Similarity=0.029 Sum_probs=79.4
Q ss_pred CceeEEeecCC-----HHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCC-
Q psy7344 115 CGHSLMFCGND-----SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPH- 188 (240)
Q Consensus 115 ~pvivqi~g~d-----~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~- 188 (240)
.|+++||++++ ++++.++++.+++.+|.|+||+|||+.. |..++++++.+.++++++++....+...+
T Consensus 182 ~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~------Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~ 255 (415)
T 3i65_A 182 HIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNNI 255 (415)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------------CCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCC------CcccccCHHHHHHHHHHHHHHHHhhccccc
Confidence 46889998886 7899999999988899999999999973 45678999999999999987521000000
Q ss_pred --------CCCCCee-eEEeee--hh--cHHHHHHHHhC-CCCeEEEeccccc
Q psy7344 189 --------CDGNDIN-IGCPQM--VA--KRGHYGAYLQD-DWPLLTELGKMAM 227 (240)
Q Consensus 189 --------~~~~~~p-vsvK~r--~~--~~~~~~~~l~~-G~~~itih~R~~~ 227 (240)
-...++| |++|++ ++ ++.++++.+++ |+|+|++|+||..
T Consensus 256 ~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~ 308 (415)
T 3i65_A 256 MNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQ 308 (415)
T ss_dssp SCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSC
T ss_pred ccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcc
Confidence 0002578 999999 33 57899999999 9999999999974
No 8
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.44 E-value=6.9e-14 Score=124.20 Aligned_cols=142 Identities=18% Similarity=0.171 Sum_probs=104.9
Q ss_pred cccCCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccccccCCCc--cccc-----cCch
Q psy7344 10 ETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAEPHCD--GIDI-----NIGC 82 (240)
Q Consensus 10 ~~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~lap~~~--~~dl-----~~gC 82 (240)
..+. +|.||||+|||+.++++.++|+.|+++++++.+++.++. +..+.|+++|... ++.. ..++ ..|
T Consensus 80 a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~-~~~~~pv~vKir~---G~~~~~~~~~a~~l~~~G- 153 (318)
T 1vhn_A 80 LSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELR-KSVSGKFSVKTRL---GWEKNEVEEIYRILVEEG- 153 (318)
T ss_dssp HTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHH-HHCSSEEEEEEES---CSSSCCHHHHHHHHHHTT-
T ss_pred HHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHH-HhhCCCEEEEecC---CCChHHHHHHHHHHHHhC-
Confidence 4455 999999999999999999999999999999999999998 4667899988542 2111 0111 445
Q ss_pred hhhhhhhccccee-e--eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhccc
Q psy7344 83 PQMVAKRGHYGAY-L--QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGH 158 (240)
Q Consensus 83 ~~~i~~~g~~ga~-l--~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g 158 (240)
...+++|+++... + ..+|+++.+++. +.||++. +++.+..++.+.++. ++|+|+++++
T Consensus 154 ~d~i~v~g~~~~~~~~~~~~~~~i~~i~~-----~ipVi~~---GgI~s~~da~~~l~~~gad~V~iGR~---------- 215 (318)
T 1vhn_A 154 VDEVFIHTRTVVQSFTGRAEWKALSVLEK-----RIPTFVS---GDIFTPEDAKRALEESGCDGLLVARG---------- 215 (318)
T ss_dssp CCEEEEESSCTTTTTSSCCCGGGGGGSCC-----SSCEEEE---SSCCSHHHHHHHHHHHCCSEEEESGG----------
T ss_pred CCEEEEcCCCccccCCCCcCHHHHHHHHc-----CCeEEEE---CCcCCHHHHHHHHHcCCCCEEEECHH----------
Confidence 3566777765431 1 245676666543 5787765 777777788888874 8999999887
Q ss_pred ccccccCCHHHHHHHHHHhhh
Q psy7344 159 YGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 159 ~G~~l~~~p~~i~~iv~~~~~ 179 (240)
++.||+.+.++.+.+..
T Consensus 216 ----~l~~P~l~~~~~~~~~~ 232 (318)
T 1vhn_A 216 ----AIGRPWIFKQIKDFLRS 232 (318)
T ss_dssp ----GTTCTTHHHHHHHHHHH
T ss_pred ----HHhCcchHHHHHHHHhC
Confidence 56899999888876653
No 9
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.39 E-value=1.2e-12 Score=115.49 Aligned_cols=96 Identities=10% Similarity=0.088 Sum_probs=84.3
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCC-EEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCD-GIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d-~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.|+++||.+.+++++.++++++++ ++| +|+||++||+. + .+..++.+++.+.++++++++.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~---~--g~~~~g~~~e~~~~iv~~vr~~----------- 156 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNV---P--GEPQLAYDFEATEKLLKEVFTF----------- 156 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS---S--SCCCGGGCHHHHHHHHHHHTTT-----------
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC---C--CcccccCCHHHHHHHHHHHHHh-----------
Confidence 5799999999999999999999976 789 99999999996 2 2566778999999999999988
Q ss_pred CCeeeEEeeeh----hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 192 NDINIGCPQMV----AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 192 ~~~pvsvK~r~----~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.++||++|++. ++..++++.+++ |+|+|++|+|+
T Consensus 157 ~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~ 195 (311)
T 1jub_A 157 FTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSI 195 (311)
T ss_dssp CCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCC
Confidence 68899999993 245678999999 99999999997
No 10
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.33 E-value=1.4e-12 Score=131.87 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=92.0
Q ss_pred CCceeEEe-ecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMF-CGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi-~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.|+++++ .+.+++++.++++++++ ++|+|+||+|||+. ....++|++++.+|+.+.++++++++.
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~----------- 701 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGMGLACGQDPELVRNICRWVRQA----------- 701 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-----SBGGGCHHHHHHHHHHHHHH-----------
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCcccccccCHHHHHHHHHHHHHh-----------
Confidence 46888888 57799999999999964 89999999999997 345678999999999999999999998
Q ss_pred CCeeeEEeee--hhcHHHHHHHHhC-CCCeEEE----------------------ecccccccCCCCCCCCC
Q psy7344 192 NDINIGCPQM--VAKRGHYGAYLQD-DWPLLTE----------------------LGKMAMLVGILDNTGSW 238 (240)
Q Consensus 192 ~~~pvsvK~r--~~~~~~~~~~l~~-G~~~iti----------------------h~R~~~~~~~~~~~adw 238 (240)
+++||++|++ +.++.++++.+++ |+|+|++ |+|+..+. ++++++|
T Consensus 702 ~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg--~sg~~~~ 771 (1025)
T 1gte_A 702 VQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGG--VSGTAIR 771 (1025)
T ss_dssp CSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEE--EESGGGH
T ss_pred hCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCC--CCcccch
Confidence 7899999999 5678999999999 9999999 77776665 3577665
No 11
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.29 E-value=5.6e-12 Score=111.32 Aligned_cols=96 Identities=14% Similarity=0.209 Sum_probs=84.4
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCC---EEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCD---GIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHC 189 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d---~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~ 189 (240)
+.|+++||.+.+++++.++++++++ ++| +|+||++||+. ++ +..++.+++.+.++++++++.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~---~g--~~~~g~~~~~~~~ii~~vr~~--------- 158 (314)
T 2e6f_A 93 KKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV---PG--KPQVAYDFEAMRTYLQQVSLA--------- 158 (314)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS---TT--CCCGGGSHHHHHHHHHHHHHH---------
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC---CC--chhhcCCHHHHHHHHHHHHHh---------
Confidence 5799999999999999999999976 689 99999999996 22 456778999999999999998
Q ss_pred CCCCeeeEEeeeh----hcHHHHHHHHhC-C-CCeEEEeccc
Q psy7344 190 DGNDINIGCPQMV----AKRGHYGAYLQD-D-WPLLTELGKM 225 (240)
Q Consensus 190 ~~~~~pvsvK~r~----~~~~~~~~~l~~-G-~~~itih~R~ 225 (240)
.++||++|++. ++..++++.+++ | +|+|++|+|+
T Consensus 159 --~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 159 --YGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp --HCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred --cCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 67899999993 256778999999 9 9999999998
No 12
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.27 E-value=1.2e-11 Score=114.27 Aligned_cols=107 Identities=11% Similarity=0.017 Sum_probs=84.9
Q ss_pred CceeEEeecCC-----HHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCC-
Q psy7344 115 CGHSLMFCGND-----SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPH- 188 (240)
Q Consensus 115 ~pvivqi~g~d-----~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~- 188 (240)
.|+++||++++ ++++.++++.+.+++|+|+||++||+.. |...+.+++.+.+|++++++....++..+
T Consensus 180 ~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~------Glr~lq~~~~l~~il~~v~~~~~~~~~~~~ 253 (443)
T 1tv5_A 180 HIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNNI 253 (443)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHHHHHHHHC----
T ss_pred ceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCc------ccccccCHHHHHHHHHHHHHHHhhhcccCc
Confidence 57999999987 8899999999988899999999999962 45678999999999999986521111000
Q ss_pred --------------------------------------CCCCCee-eEEeeeh--h--cHHHHHHHHhC-CCCeEEEecc
Q psy7344 189 --------------------------------------CDGNDIN-IGCPQMV--A--KRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 189 --------------------------------------~~~~~~p-vsvK~r~--~--~~~~~~~~l~~-G~~~itih~R 224 (240)
..+.++| |++|++. + +..++++.+++ |+|+|++|+|
T Consensus 254 ~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~nt 333 (443)
T 1tv5_A 254 MNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNT 333 (443)
T ss_dssp ----------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECC
Confidence 0014678 9999993 2 67889999999 9999999999
Q ss_pred ccc
Q psy7344 225 MAM 227 (240)
Q Consensus 225 ~~~ 227 (240)
|..
T Consensus 334 t~~ 336 (443)
T 1tv5_A 334 TTQ 336 (443)
T ss_dssp BSC
T ss_pred Ccc
Confidence 984
No 13
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.19 E-value=5.4e-11 Score=106.07 Aligned_cols=105 Identities=10% Similarity=-0.043 Sum_probs=82.2
Q ss_pred CCceeEEeecCC-------HHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccC
Q psy7344 114 MCGHSLMFCGND-------SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAE 186 (240)
Q Consensus 114 ~~pvivqi~g~d-------~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~ 186 (240)
+.|+++|+.+++ ++++.++++++.+++|+|+||++||+.. |...+.+++.+.++++++++.++.+++
T Consensus 133 ~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~------g~~~~~~~~~~~~il~~vr~~~~~~~~ 206 (336)
T 1f76_A 133 DGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTP------GLRTLQYGEALDDLLTAIKNKQNDLQA 206 (336)
T ss_dssp CSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSST------TGGGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCC------CcccccCHHHHHHHHHHHHHHHHhhhh
Confidence 358999998887 8899999998877999999999999842 223467899999999999987200000
Q ss_pred CCCCCCCeeeEEeeeh----hcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 187 PHCDGNDINIGCPQMV----AKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 187 ~~~~~~~~pvsvK~r~----~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
. .+.++||++|++. +++.++++.+++ |+|+|++|+++.
T Consensus 207 ~--~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~ 249 (336)
T 1f76_A 207 M--HHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTL 249 (336)
T ss_dssp H--HTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBC
T ss_pred c--ccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcc
Confidence 0 0017899999993 367889999999 999999999874
No 14
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.16 E-value=8.2e-11 Score=103.27 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=85.2
Q ss_pred CCceeEEeecCCHHHHHHHHHHHc--cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAE--PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le--~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.|+++||++++++++.+++++++ .++|+|+||++||+.. ++ |..++.+++.+.++++++++.
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~--~g--~~~~g~~~~~~~eii~~v~~~----------- 162 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVK--HG--GQAFGTDPEVAAALVKACKAV----------- 162 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGG--GT--TEEGGGCHHHHHHHHHHHHHH-----------
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCC--Cc--hhhhcCCHHHHHHHHHHHHHh-----------
Confidence 579999999999999999999997 5799999999999842 22 455677999999999999987
Q ss_pred CCeeeEEeee--hhcHHHHHHHHhC-CCCeEEE---------eccccc
Q psy7344 192 NDINIGCPQM--VAKRGHYGAYLQD-DWPLLTE---------LGKMAM 227 (240)
Q Consensus 192 ~~~pvsvK~r--~~~~~~~~~~l~~-G~~~iti---------h~R~~~ 227 (240)
.++||++|++ +.+..++++.+++ |+|+|++ |.|++.
T Consensus 163 ~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~ 210 (311)
T 1ep3_A 163 SKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQ 210 (311)
T ss_dssp CSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCS
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCC
Confidence 6789999998 4566899999999 9999999 777654
No 15
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.01 E-value=5.7e-10 Score=99.75 Aligned_cols=90 Identities=16% Similarity=0.210 Sum_probs=74.2
Q ss_pred HHHHHHHHHHc-cCCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAE-PHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le-~~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|+.+. .|+|+|+||.+| |........+|..+..++..+.+++++++++ .++||
T Consensus 144 ~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~-----------v~~pv 212 (338)
T 1z41_A 144 QEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQV-----------WDGPL 212 (338)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-----------CCSCE
T ss_pred HHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHH-----------cCCcE
Confidence 56788888775 489999999998 6543334557777888899999999999998 67899
Q ss_pred EEeeeh----------hcHHHHHHHHhC-CCCeEEEeccccc
Q psy7344 197 GCPQMV----------AKRGHYGAYLQD-DWPLLTELGKMAM 227 (240)
Q Consensus 197 svK~r~----------~~~~~~~~~l~~-G~~~itih~R~~~ 227 (240)
++|++. +++.++++.|++ |+|+|++|+++..
T Consensus 213 ~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~ 254 (338)
T 1z41_A 213 FVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALV 254 (338)
T ss_dssp EEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred EEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccc
Confidence 999983 356789999999 9999999999754
No 16
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=98.94 E-value=1.3e-10 Score=104.65 Aligned_cols=142 Identities=9% Similarity=0.023 Sum_probs=89.7
Q ss_pred CCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeeccccccc--CCCccccc--cCchhhhhh-
Q psy7344 13 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAE--PHCDGIDI--NIGCPQMVA- 87 (240)
Q Consensus 13 ~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~la--p~~~~~dl--~~gC~~~i~- 87 (240)
.++|.||||++||..+ + |..|++||+++.+++.++. +..+.|++||..-.+. .+.+..++ .+|....++
T Consensus 154 ~g~d~ielNisCPn~~---g--g~~l~~~~e~~~~il~av~-~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 154 EKGVILELNLSCPNVP---G--KPQVAYDFDAMRQCLTAVS-EVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp HHCCEEEEECSSCCST---T--SCCGGGSHHHHHHHHHHHH-HHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEE
T ss_pred cCCCEEEEeCCCCCCC---C--chhhccCHHHHHHHHHHHH-HhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEE
Confidence 4689999999999975 2 6889999999999999999 5778999998432111 00000100 121011111
Q ss_pred -----------hhcc---------cceee-----eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCE
Q psy7344 88 -----------KRGH---------YGAYL-----QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDG 142 (240)
Q Consensus 88 -----------~~g~---------~ga~l-----~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~ 142 (240)
.|++ +|.+. ..+|+++.++.... .+.|++.. +++.+..++.+++..|+|+
T Consensus 228 ~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~--~~ipII~~---GGI~s~~da~~~l~aGAd~ 302 (354)
T 4ef8_A 228 INSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC--PGKLIFGC---GGVYTGEDAFLHVLAGASM 302 (354)
T ss_dssp CCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC--TTSEEEEE---SCCCSHHHHHHHHHHTEEE
T ss_pred ecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhC--CCCCEEEE---CCcCCHHHHHHHHHcCCCE
Confidence 1111 11111 12366666665542 13676655 7888888899999889999
Q ss_pred EEecCCCchhhhhcccccccccCC-HHHHHHHHHHhhh
Q psy7344 143 IDINIGCPQMVAKRGHYGAYLQDD-WPLLTNLVYSPNM 179 (240)
Q Consensus 143 Idin~gCP~~~~~~~g~G~~l~~~-p~~i~~iv~~~~~ 179 (240)
|+++++ ++.+ |+.+.+|.+.++.
T Consensus 303 V~vgra--------------~l~~GP~~~~~i~~~l~~ 326 (354)
T 4ef8_A 303 VQVGTA--------------LQEEGPSIFERLTSELLG 326 (354)
T ss_dssp EEECHH--------------HHHHCTTHHHHHHHHHHH
T ss_pred EEEhHH--------------HHHhCHHHHHHHHHHHHH
Confidence 999776 3345 7777777776654
No 17
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=98.87 E-value=4.8e-09 Score=95.15 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=73.1
Q ss_pred HHHHHHHHHHc-cCCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAE-PHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le-~~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|+.+. .|+|+|+||.+| |........+|..+..++..+.++++++++++ +.+ ||
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av---------g~~-~V 236 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEI---------GSD-RV 236 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---------CGG-GE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHh---------cCC-ce
Confidence 47788888775 489999999998 55333345577778888999999999999983 124 99
Q ss_pred EEeeehh-------------cHHHHHHHHhC-CCCeEEEeccccccc
Q psy7344 197 GCPQMVA-------------KRGHYGAYLQD-DWPLLTELGKMAMLV 229 (240)
Q Consensus 197 svK~r~~-------------~~~~~~~~l~~-G~~~itih~R~~~~~ 229 (240)
++|++.. ++.++++.|++ |+|+|++|+|+..+.
T Consensus 237 ~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~ 283 (376)
T 1icp_A 237 GIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTA 283 (376)
T ss_dssp EEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC-
T ss_pred EEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCC
Confidence 9999821 25789999999 999999999986653
No 18
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.86 E-value=4e-09 Score=95.64 Aligned_cols=93 Identities=14% Similarity=0.098 Sum_probs=72.3
Q ss_pred HHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|+.+.+ |+|+|+||.+| |........+|..+..++..+.++++++++++ +.+ ||
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av---------g~~-~v 235 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVF---------GPE-RV 235 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---------CGG-GE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHc---------CCC-cE
Confidence 578888888754 89999999998 76443445677778889999999999999983 124 99
Q ss_pred EEeeeh-------------hcHHHHHHHHhC-CCCeEEEeccccccc
Q psy7344 197 GCPQMV-------------AKRGHYGAYLQD-DWPLLTELGKMAMLV 229 (240)
Q Consensus 197 svK~r~-------------~~~~~~~~~l~~-G~~~itih~R~~~~~ 229 (240)
++|++. +++.++++.|++ |+|+|++|+|+..+.
T Consensus 236 ~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~ 282 (377)
T 2r14_A 236 GIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGG 282 (377)
T ss_dssp EEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC----
T ss_pred EEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCC
Confidence 999973 236788999999 999999999986553
No 19
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.85 E-value=4e-09 Score=94.39 Aligned_cols=91 Identities=15% Similarity=0.197 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 126 SKNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 126 ~~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++++.++|+.+.+ |+|+||||.+| |........||..+..++..+.+++++++++ .+.|
T Consensus 143 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~-----------v~~p 211 (340)
T 3gr7_A 143 VQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREV-----------WDGP 211 (340)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHH-----------CCSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHh-----------cCCc
Confidence 4567778887765 89999999996 7643344567777888899999999999998 6889
Q ss_pred eEEeeeh----------hcHHHHHHHHhC-CCCeEEEe-ccccc
Q psy7344 196 IGCPQMV----------AKRGHYGAYLQD-DWPLLTEL-GKMAM 227 (240)
Q Consensus 196 vsvK~r~----------~~~~~~~~~l~~-G~~~itih-~R~~~ 227 (240)
|++|++. +++.++++.|++ |+|+|++| +++..
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~ 255 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP 255 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSC
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccC
Confidence 9999992 467899999999 99999999 45444
No 20
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=98.85 E-value=1.8e-09 Score=96.77 Aligned_cols=147 Identities=9% Similarity=0.028 Sum_probs=92.2
Q ss_pred cccccCCC-CeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeeccccccc----------CCCccc
Q psy7344 8 RIETEPHC-DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAE----------PHCDGI 76 (240)
Q Consensus 8 ~~~~~~~~-d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~la----------p~~~~~ 76 (240)
|.+.+.++ |.||||++||..+ .++.|++||+++.+++.++. +..+.|++||..-... -.++.+
T Consensus 148 ~~l~~~g~~d~ielNisCPn~~-----G~~~l~~~~e~l~~il~av~-~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i 221 (345)
T 3oix_A 148 XMVEASKYQGLVELNLSCPNVP-----GXPQIAYDFETTDQILSEVF-TYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPL 221 (345)
T ss_dssp HHHHHSSCCSEEEEECSCCCST-----TCCCGGGCHHHHHHHHHHHT-TTCCSCEEEEECCCCCHHHHHHHHHHHTTSCC
T ss_pred HHHhccCCCcEEEEecCCCCcC-----CchhhcCCHHHHHHHHHHHH-HHhCCCeEEEECCCCCHHHHHHHHHHhCCCce
Confidence 44554565 5999999999976 25889999999999999999 5778999998431110 001111
Q ss_pred cc----c-Cchhhhhhhhc---------ccceee-eCC----hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHc
Q psy7344 77 DI----N-IGCPQMVAKRG---------HYGAYL-QDD----WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAE 137 (240)
Q Consensus 77 dl----~-~gC~~~i~~~g---------~~ga~l-~~d----~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le 137 (240)
++ | .| ..+.+|. .+|-+. ... +++++++...+. .+.|++.. +++.+..++.++++
T Consensus 222 ~~int~nt~g--~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~-~~ipIIg~---GGI~s~~da~~~l~ 295 (345)
T 3oix_A 222 TFVNCINSIG--NGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLN-PSIQIIGT---GGVXTGRDAFEHIL 295 (345)
T ss_dssp SEEEECCCEE--EEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSC-TTSEEEEE---SSCCSHHHHHHHHH
T ss_pred EEEEeecccc--cceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcC-CCCcEEEE---CCCCChHHHHHHHH
Confidence 10 0 00 0001111 122222 112 456666655442 13676655 88888889999998
Q ss_pred cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 138 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 138 ~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
.|+|+|+++++- +..+|+.+.++.+.++.
T Consensus 296 aGAd~V~igra~-------------~~~gP~~~~~i~~~L~~ 324 (345)
T 3oix_A 296 CGASMVQIGTAL-------------HQEGPQIFKRITKELXA 324 (345)
T ss_dssp HTCSEEEESHHH-------------HHHCTHHHHHHHHHHHH
T ss_pred hCCCEEEEChHH-------------HhcChHHHHHHHHHHHH
Confidence 899999997651 24688888888877655
No 21
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=98.80 E-value=2.3e-09 Score=96.88 Aligned_cols=138 Identities=12% Similarity=0.067 Sum_probs=90.1
Q ss_pred CCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhccc-------CCCceeecccccccCCCc---cccc----
Q psy7344 13 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVS-------KNGPLFMGPLFIAEPHCD---GIDI---- 78 (240)
Q Consensus 13 ~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~-------~~~p~~vk~~~~lap~~~---~~dl---- 78 (240)
.++|.||||++||..+ |..+|++++.+.+++.++. +. .+.|++||.. |..+ ..++
T Consensus 175 ~~ad~ielNisCPn~~------G~~~l~~~~~l~~ll~av~-~~~~~~~~~~~~Pv~vKi~----p~~~~~~~~~ia~~~ 243 (367)
T 3zwt_A 175 PLADYLVVNVSSPNTA------GLRSLQGKAELRRLLTKVL-QERDGLRRVHRPAVLVKIA----PDLTSQDKEDIASVV 243 (367)
T ss_dssp GGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHH-HHHHTSCGGGCCEEEEEEC----SCCCHHHHHHHHHHH
T ss_pred hhCCEEEEECCCCCCC------CccccCCHHHHHHHHHHHH-HHHhhccccCCceEEEEeC----CCCCHHHHHHHHHHH
Confidence 4689999999999885 3457899999999999886 22 4689999843 2221 1111
Q ss_pred -cCchhhhhhhhccc---------------ceee-eC----ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHc
Q psy7344 79 -NIGCPQMVAKRGHY---------------GAYL-QD----DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAE 137 (240)
Q Consensus 79 -~~gC~~~i~~~g~~---------------ga~l-~~----d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le 137 (240)
..| ...++.|+++ |.+. .. .+++++++...+. ...|++.. +++.+..++.++++
T Consensus 244 ~~aG-adgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~-~~ipvI~~---GGI~s~~da~~~l~ 318 (367)
T 3zwt_A 244 KELG-IDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQ-GRVPIIGV---GGVSSGQDALEKIR 318 (367)
T ss_dssp HHHT-CCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTT-TCSCEEEE---SSCCSHHHHHHHHH
T ss_pred HHcC-CCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcC-CCceEEEE---CCCCCHHHHHHHHH
Confidence 333 2334444333 1111 11 1356666665542 13677665 78888888889988
Q ss_pred cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 138 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 138 ~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
.|+|+|+++++. +..+|+.+.++.+.+..
T Consensus 319 ~GAd~V~vgra~-------------l~~gP~~~~~i~~~l~~ 347 (367)
T 3zwt_A 319 AGASLVQLYTAL-------------TFWGPPVVGKVKRELEA 347 (367)
T ss_dssp HTCSEEEESHHH-------------HHHCTHHHHHHHHHHHH
T ss_pred cCCCEEEECHHH-------------HhcCcHHHHHHHHHHHH
Confidence 899999997761 12468888888877655
No 22
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.80 E-value=8.1e-09 Score=93.21 Aligned_cols=92 Identities=14% Similarity=0.085 Sum_probs=71.9
Q ss_pred HHHHHHHHHHc-cCCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAE-PHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le-~~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|+.+. .|+|+|+||.+| |........+|..+..++..+.++++++++++ +.+ ||
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---------g~~-~v 230 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEW---------SAD-RI 230 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHS---------CGG-GE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhc---------CCC-cE
Confidence 57788888775 489999999998 54332334577778888999999999999983 124 99
Q ss_pred EEeeehh--------------cHHHHHHHHhC-CCCeEEEecccccc
Q psy7344 197 GCPQMVA--------------KRGHYGAYLQD-DWPLLTELGKMAML 228 (240)
Q Consensus 197 svK~r~~--------------~~~~~~~~l~~-G~~~itih~R~~~~ 228 (240)
++|++.. ++.++++.|++ |+|+|++|+|+..+
T Consensus 231 ~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~ 277 (364)
T 1vyr_A 231 GIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAG 277 (364)
T ss_dssp EEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTB
T ss_pred EEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccC
Confidence 9999932 24668999999 99999999987644
No 23
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=98.75 E-value=1.3e-08 Score=93.12 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=74.2
Q ss_pred HHHHHHHHHHc-cCCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAE-PHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le-~~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|+.+. .|+|+||||.+| |........+|..+..++..+.+|++++++++ .+.||
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~av----------g~~~V 240 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAI----------GADRV 240 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH----------CGGGE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHh----------CCCcE
Confidence 57888888875 489999999997 77443445677778888999999999999983 22389
Q ss_pred EEeeeh-------------hcHHHHHHHHhC-C------CCeEEEecccccc
Q psy7344 197 GCPQMV-------------AKRGHYGAYLQD-D------WPLLTELGKMAML 228 (240)
Q Consensus 197 svK~r~-------------~~~~~~~~~l~~-G------~~~itih~R~~~~ 228 (240)
++|++. +++.++++.|++ | +|+|++|+|+..+
T Consensus 241 ~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~ 292 (402)
T 2hsa_B 241 GVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVA 292 (402)
T ss_dssp EEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCT
T ss_pred EEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCcccc
Confidence 999982 236789999999 9 9999999998655
No 24
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.75 E-value=1.1e-08 Score=92.32 Aligned_cols=90 Identities=18% Similarity=0.171 Sum_probs=71.1
Q ss_pred HHHHHHHHHHc-cCCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAE-PHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le-~~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|+.+. .|+|+|+||.+| |........+|..+..++..+.++++++++.+ +.+ ||
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---------g~~-pv 230 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---------GAE-RV 230 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---------CGG-GE
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---------CCC-cE
Confidence 67888888775 489999999998 55333344577778888899999999999973 124 99
Q ss_pred EEeeehh-------------cHHHHHHHHhC-CCCeEEEecccc
Q psy7344 197 GCPQMVA-------------KRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 197 svK~r~~-------------~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
++|++.. ++.++++.|++ |+|+|++|+|+.
T Consensus 231 ~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~ 274 (365)
T 2gou_A 231 GVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDW 274 (365)
T ss_dssp EEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBT
T ss_pred EEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 9999931 35678999999 999999999874
No 25
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.73 E-value=1.7e-08 Score=97.60 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=74.9
Q ss_pred HHHHHHHHHHc-cCCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAE-PHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le-~~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|+.+. .|+|+|+||.|| |........||..+..++..+.++++++++++ +.++||
T Consensus 141 ~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~v---------G~~~~v 211 (671)
T 1ps9_A 141 DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERV---------GNDFII 211 (671)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---------CSSSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHc---------CCCceE
Confidence 57888888775 489999999998 54333345677778888999999999999983 247899
Q ss_pred EEeeeh----------hcHHHHHHHHhC-CCCeEEEecccccc
Q psy7344 197 GCPQMV----------AKRGHYGAYLQD-DWPLLTELGKMAML 228 (240)
Q Consensus 197 svK~r~----------~~~~~~~~~l~~-G~~~itih~R~~~~ 228 (240)
++|++. +++.++++.|++ |+|+|++|+|+.++
T Consensus 212 ~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~ 254 (671)
T 1ps9_A 212 IYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEA 254 (671)
T ss_dssp EEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTC
T ss_pred EEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCcccc
Confidence 999992 356789999999 99999999988654
No 26
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=98.68 E-value=2.6e-08 Score=89.37 Aligned_cols=93 Identities=14% Similarity=0.178 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 126 SKNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 126 ~~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++++.++|+.+.+ |+|+|+||.+| |........||..+..++..+.++++++++++ +.++|
T Consensus 151 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~av---------G~d~p 221 (349)
T 3hgj_A 151 LQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVV---------PRELP 221 (349)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHS---------CTTSC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHh---------cCCce
Confidence 4567777777754 89999999999 77544455678778888889999999999982 23789
Q ss_pred eEEeeeh----------hcHHHHHHHHhC-CCCeEEEe-ccccc
Q psy7344 196 IGCPQMV----------AKRGHYGAYLQD-DWPLLTEL-GKMAM 227 (240)
Q Consensus 196 vsvK~r~----------~~~~~~~~~l~~-G~~~itih-~R~~~ 227 (240)
|++|++. +++.++++.|++ |+|+|.+| +++..
T Consensus 222 V~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~ 265 (349)
T 3hgj_A 222 LFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVL 265 (349)
T ss_dssp EEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCS
T ss_pred EEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCc
Confidence 9999993 357889999999 99999999 56543
No 27
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.66 E-value=2e-08 Score=88.30 Aligned_cols=146 Identities=10% Similarity=-0.015 Sum_probs=91.6
Q ss_pred cccccCCCC-eecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccccccCCCcccc-----ccCc
Q psy7344 8 RIETEPHCD-GIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAEPHCDGID-----INIG 81 (240)
Q Consensus 8 ~~~~~~~~d-~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~lap~~~~~d-----l~~g 81 (240)
+.+.+.++| .|+||++||.. + .+..+..+++.+.+++.++. +..+.|+++|....+.. .+..+ ...|
T Consensus 113 ~~~~~~g~d~~iein~~~P~~---~--g~~~~g~~~e~~~~iv~~vr-~~~~~Pv~vKi~~~~~~-~~~~~~a~~~~~~G 185 (311)
T 1jub_A 113 KKIQESDFSGITELNLSCPNV---P--GEPQLAYDFEATEKLLKEVF-TFFTKPLGVKLPPYFDL-VHFDIMAEILNQFP 185 (311)
T ss_dssp HHHHHSCCCSEEEEESCCCCS---S--SCCCGGGCHHHHHHHHHHHT-TTCCSCEEEEECCCCSH-HHHHHHHHHHTTSC
T ss_pred HHHHhcCCCeEEEEeccCCCC---C--CcccccCCHHHHHHHHHHHH-HhcCCCEEEEECCCCCH-HHHHHHHHHHHHcC
Confidence 445567789 99999999996 2 36778889999999999998 45678999874211100 00000 1223
Q ss_pred hhhhhhhhcccc-------------------e-eeeC------ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHH
Q psy7344 82 CPQMVAKRGHYG-------------------A-YLQD------DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKL 135 (240)
Q Consensus 82 C~~~i~~~g~~g-------------------a-~l~~------d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~ 135 (240)
...+.++++++ . .+.. .+++++++...+. .+.|++.. +++.+..++.++
T Consensus 186 -~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~-~~ipvi~~---GGI~~~~da~~~ 260 (311)
T 1jub_A 186 -LTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLK-PEIQIIGT---GGIETGQDAFEH 260 (311)
T ss_dssp -CCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSC-TTSEEEEE---SSCCSHHHHHHH
T ss_pred -CcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcC-CCCCEEEE---CCCCCHHHHHHH
Confidence 22333333221 0 1111 1455555554432 14676655 777777788888
Q ss_pred HccCCCEEEecCCCchhhhhcccccccccC-CHHHHHHHHHHhhh
Q psy7344 136 AEPHCDGIDINIGCPQMVAKRGHYGAYLQD-DWPLLTNLVYSPNM 179 (240)
Q Consensus 136 le~~~d~Idin~gCP~~~~~~~g~G~~l~~-~p~~i~~iv~~~~~ 179 (240)
++.|+|+|+++.+ ++. +|+.+.++.+.++.
T Consensus 261 l~~GAd~V~vg~~--------------~l~~~p~~~~~i~~~l~~ 291 (311)
T 1jub_A 261 LLCGATMLQIGTA--------------LHKEGPAIFDRIIKELEE 291 (311)
T ss_dssp HHHTCSEEEECHH--------------HHHHCTHHHHHHHHHHHH
T ss_pred HHcCCCEEEEchH--------------HHhcCcHHHHHHHHHHHH
Confidence 8779999999666 443 88888888876654
No 28
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=98.65 E-value=6.8e-09 Score=94.99 Aligned_cols=137 Identities=13% Similarity=0.043 Sum_probs=82.1
Q ss_pred CCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhccc--------------------CCCc-eeecccccccC
Q psy7344 13 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVS--------------------KNGP-LFMGPLFIAEP 71 (240)
Q Consensus 13 ~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~--------------------~~~p-~~vk~~~~lap 71 (240)
.++|.|+||++||..+ |..++++++.+.+++.++. +. .+.| ++||.. |
T Consensus 210 ~~ad~ieiNiScPNt~------Gl~~lq~~~~l~~ll~aV~-~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~----p 278 (415)
T 3i65_A 210 RYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVK-EEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLA----P 278 (415)
T ss_dssp GGCSEEEEECCCCC--------------CCHHHHHHHHHHH-HHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEEC----S
T ss_pred hhCCEEEEECCCCCCC------CcccccCHHHHHHHHHHHH-HHHHhhcccccccccccccccCCCCCeEEEEec----C
Confidence 3489999999999975 6779999999999999987 33 2578 888842 2
Q ss_pred CCc---cccc-----cCchhhhhhhhcccc-------------eee-eCC----hhhHHHhhhcccCCCCceeEEeecCC
Q psy7344 72 HCD---GIDI-----NIGCPQMVAKRGHYG-------------AYL-QDD----WPLLTELGFKTRSHMCGHSLMFCGND 125 (240)
Q Consensus 72 ~~~---~~dl-----~~gC~~~i~~~g~~g-------------a~l-~~d----~eli~~i~~~~~~~~~pvivqi~g~d 125 (240)
..+ ..++ ..| ...++.++++. .+. ... +++++++...+. ...|+|.. ++
T Consensus 279 d~~~~~i~~iA~~a~~aG-aDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~-~~iPIIg~---GG 353 (415)
T 3i65_A 279 DLNQEQKKEIADVLLETN-IDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTN-KQIPIIAS---GG 353 (415)
T ss_dssp CCCHHHHHHHHHHHHHHT-CSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTT-TCSCEEEC---SS
T ss_pred CCCHHHHHHHHHHHHHcC-CcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhC-CCCCEEEE---CC
Confidence 211 1111 223 23333443332 111 111 255666655442 13676654 88
Q ss_pred HHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCC-HHHHHHHHHHhhh
Q psy7344 126 SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDD-WPLLTNLVYSPNM 179 (240)
Q Consensus 126 ~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~-p~~i~~iv~~~~~ 179 (240)
+.+..++.+++..|+|+|+++.+ ++.+ |+.+.+|.+.+.+
T Consensus 354 I~s~eDa~e~l~aGAd~VqIgra--------------~l~~GP~~~~~i~~~L~~ 394 (415)
T 3i65_A 354 IFSGLDALEKIEAGASVCQLYSC--------------LVFNGMKSAVQIKRELNH 394 (415)
T ss_dssp CCSHHHHHHHHHHTEEEEEESHH--------------HHHHGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEEcHH--------------HHhcCHHHHHHHHHHHHH
Confidence 88888999999889999999776 2333 6677777776654
No 29
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.59 E-value=2.5e-08 Score=100.83 Aligned_cols=146 Identities=11% Similarity=0.089 Sum_probs=89.7
Q ss_pred ccccCCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccccccCCCccccc-----cCchh
Q psy7344 9 IETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAEPHCDGIDI-----NIGCP 83 (240)
Q Consensus 9 ~~~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~lap~~~~~dl-----~~gC~ 83 (240)
.+.+.++|.|+||++||.. ..+.++|++++++++++.+++.++. +..+.|+++|... ...+..++ ..| .
T Consensus 656 ~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~~~iv~~v~-~~~~~Pv~vK~~~---~~~~~~~~a~~~~~~G-~ 729 (1025)
T 1gte_A 656 KAEASGADALELNLSCPHG-MGERGMGLACGQDPELVRNICRWVR-QAVQIPFFAKLTP---NVTDIVSIARAAKEGG-A 729 (1025)
T ss_dssp HHHHTTCSEEEEECCCBCC-CC-----SBGGGCHHHHHHHHHHHH-HHCSSCEEEEECS---CSSCHHHHHHHHHHHT-C
T ss_pred HHHhcCCCEEEEECCCCCC-CCCCCcccccccCHHHHHHHHHHHH-HhhCCceEEEeCC---ChHHHHHHHHHHHHcC-C
Confidence 3445789999999999998 5566799999999999999999998 4668999987421 11111110 111 1
Q ss_pred hhhhh----------------------hcccce--ee-eCCh----hhHHHhhhcccCCCCceeEEeecCCHHHHHHHHH
Q psy7344 84 QMVAK----------------------RGHYGA--YL-QDDW----PLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAK 134 (240)
Q Consensus 84 ~~i~~----------------------~g~~ga--~l-~~d~----eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~ 134 (240)
..+.. |+++.. +. ...| +++.++...+ .+.|++.. +++.+..++.+
T Consensus 730 d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~--~~ipvi~~---GGI~s~~da~~ 804 (1025)
T 1gte_A 730 DGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL--PGFPILAT---GGIDSAESGLQ 804 (1025)
T ss_dssp SEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS--TTCCEEEE---SSCCSHHHHHH
T ss_pred CEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc--CCCCEEEe---cCcCCHHHHHH
Confidence 11111 443222 22 2233 4555655443 13677665 88888888999
Q ss_pred HHccCCCEEEecCCCchhhhhccccccccc-CCHHHHHHHHHHhhh
Q psy7344 135 LAEPHCDGIDINIGCPQMVAKRGHYGAYLQ-DDWPLLTNLVYSPNM 179 (240)
Q Consensus 135 ~le~~~d~Idin~gCP~~~~~~~g~G~~l~-~~p~~i~~iv~~~~~ 179 (240)
++..|+|+|+++++ ++ ..|..+.++.+.++.
T Consensus 805 ~l~~Ga~~v~vg~~--------------~l~~~~~~~~~~~~~l~~ 836 (1025)
T 1gte_A 805 FLHSGASVLQVCSA--------------VQNQDFTVIQDYCTGLKA 836 (1025)
T ss_dssp HHHTTCSEEEESHH--------------HHTSCTTHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeec--------------cccCCccHHHHHHHHHHH
Confidence 98889999999765 22 255556666555544
No 30
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=98.59 E-value=6.3e-08 Score=87.53 Aligned_cols=110 Identities=7% Similarity=-0.073 Sum_probs=77.4
Q ss_pred CCceeEEeec-CCHHHHHHHHHHHcc-CCCEEEecCCCchh-----------------hhhc-----ccccccc---cC-
Q psy7344 114 MCGHSLMFCG-NDSKNLTEAAKLAEP-HCDGIDINIGCPQM-----------------VAKR-----GHYGAYL---QD- 165 (240)
Q Consensus 114 ~~pvivqi~g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~-----------------~~~~-----~g~G~~l---~~- 165 (240)
+.|+.+||.+ .|.+...++++.++. |+++|+||++||.. .... .+.|+.+ +.
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~ 211 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGA 211 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhc
Confidence 4689999976 788888899988865 89999999999972 1110 1234443 22
Q ss_pred -CHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCC
Q psy7344 166 -DWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSW 238 (240)
Q Consensus 166 -~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw 238 (240)
|+....+.++++++. +++||++|.- .+.+.++.+++ |+|+|+++++...|.+ .++++|
T Consensus 212 ~d~~~~~~~i~~lr~~-----------~~~PvivK~v--~~~e~a~~a~~~Gad~I~vs~~ggr~~~--~g~~~~ 271 (368)
T 2nli_A 212 SKQKISPRDIEEIAGH-----------SGLPVFVKGI--QHPEDADMAIKRGASGIWVSNHGARQLY--EAPGSF 271 (368)
T ss_dssp BCSBCCHHHHHHHHHH-----------SSSCEEEEEE--CSHHHHHHHHHTTCSEEEECCGGGTSCS--SCCCHH
T ss_pred cCchhhHHHHHHHHHH-----------cCCCEEEEcC--CCHHHHHHHHHcCCCEEEEcCCCcCCCC--CCCChH
Confidence 455555667777776 6889999964 34577888999 9999999776665553 466655
No 31
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=98.57 E-value=2.4e-07 Score=83.03 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=65.0
Q ss_pred CCCceeEEeecCCHHHHHHHHHHHcc----CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCC
Q psy7344 113 HMCGHSLMFCGNDSKNLTEAAKLAEP----HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPH 188 (240)
Q Consensus 113 ~~~pvivqi~g~d~~~~~~aa~~le~----~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~ 188 (240)
.+.|++++|.+.+++++.+.++.+++ ++|.|+||++||+.. .+..+..+++.+.++++++++.
T Consensus 125 ~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v~~~-------- 191 (354)
T 3tjx_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAVSEV-------- 191 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHHHHH--------
T ss_pred CCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHHHHH--------
Confidence 35799999999999888887776643 689999999999863 2456788999999999999998
Q ss_pred CCCCCeeeEEeee--hh--cHHHHHHHHhC--CCCeEE
Q psy7344 189 CDGNDINIGCPQM--VA--KRGHYGAYLQD--DWPLLT 220 (240)
Q Consensus 189 ~~~~~~pvsvK~r--~~--~~~~~~~~l~~--G~~~it 220 (240)
++.|+.+|++ +. .....+..+.+ +++.++
T Consensus 192 ---~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~ 226 (354)
T 3tjx_A 192 ---YPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFIT 226 (354)
T ss_dssp ---CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEE
T ss_pred ---hhcccccccCCCCCchhHHHHHHHHHhhcccchhh
Confidence 7889999999 32 23445555554 444443
No 32
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=98.57 E-value=7.6e-08 Score=86.81 Aligned_cols=90 Identities=16% Similarity=0.177 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 126 SKNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 126 ~~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++++.++|+.+.+ |+|+||||.+| |........||..+..++..+.++++++++++ +.+ |
T Consensus 152 i~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~v---------g~~-~ 221 (362)
T 4ab4_A 152 VEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVW---------GAQ-R 221 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---------CGG-G
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhc---------CCC-c
Confidence 3456677777754 89999999999 75433345577778888999999999999983 124 9
Q ss_pred eEEeeehh-------------cHHHHHHHHhC-CCCeEEEeccc
Q psy7344 196 IGCPQMVA-------------KRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r~~-------------~~~~~~~~l~~-G~~~itih~R~ 225 (240)
|++|++.. ++.++++.|++ |+|+|++|+++
T Consensus 222 v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 265 (362)
T 4ab4_A 222 VGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE 265 (362)
T ss_dssp EEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred eEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 99999921 35778999999 99999999987
No 33
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.53 E-value=9e-08 Score=93.43 Aligned_cols=90 Identities=13% Similarity=0.054 Sum_probs=72.7
Q ss_pred HHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|+.+.+ |+|+||||.+| |..-.....||.++..++..+.+|++++++++ +.++||
T Consensus 149 ~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~v---------g~~~pv 219 (729)
T 1o94_A 149 QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAV---------GSDCAI 219 (729)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---------TTTSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHh---------CCCceE
Confidence 678888888754 89999999999 65433345677778889999999999999983 137899
Q ss_pred EEeeeh------------hcHHHHHHHHhCCCCeEEEeccc
Q psy7344 197 GCPQMV------------AKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 197 svK~r~------------~~~~~~~~~l~~G~~~itih~R~ 225 (240)
++|++. ++..++++.|++|+|.+.+|.++
T Consensus 220 ~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~ 260 (729)
T 1o94_A 220 ATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGD 260 (729)
T ss_dssp EEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECC
T ss_pred EEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeec
Confidence 999982 25678888887799999999986
No 34
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=98.51 E-value=1.2e-07 Score=85.50 Aligned_cols=90 Identities=18% Similarity=0.206 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 126 SKNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 126 ~~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++++.++|+.+.+ |+|+||||.+| |........||..+..++..+.++++++++++ +.+ |
T Consensus 160 i~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~v---------g~~-~ 229 (361)
T 3gka_A 160 VAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVW---------SAA-R 229 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHH---------CGG-G
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHc---------CCC-e
Confidence 3456677777754 89999999999 76433445577778888899999999999983 124 9
Q ss_pred eEEeeeh-------------hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 196 IGCPQMV-------------AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r~-------------~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
|++|++. +++.++++.|++ |+|+|++|+++
T Consensus 230 v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 273 (361)
T 3gka_A 230 VGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESF 273 (361)
T ss_dssp EEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred EEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 9999993 135779999999 99999999987
No 35
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=98.47 E-value=1.6e-07 Score=85.60 Aligned_cols=110 Identities=10% Similarity=-0.037 Sum_probs=76.3
Q ss_pred CCceeEEeec-CCHHHHHHHHHHHcc-CCCEEEecCCCchh---------------hh-h----------cc----cccc
Q psy7344 114 MCGHSLMFCG-NDSKNLTEAAKLAEP-HCDGIDINIGCPQM---------------VA-K----------RG----HYGA 161 (240)
Q Consensus 114 ~~pvivqi~g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~---------------~~-~----------~~----g~G~ 161 (240)
+.|+.+||.. .|.+...++++.++. |+++++||.+||.. .. . .. +.|+
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~ 225 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDS 225 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcc
Confidence 4689999966 789888899988865 89999999999984 10 0 00 1122
Q ss_pred ---cccC---CHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEecccccccCCCCC
Q psy7344 162 ---YLQD---DWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDN 234 (240)
Q Consensus 162 ---~l~~---~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~ 234 (240)
+++. ||+...+.++++++. +++||++|.- .+.+.++.+++ |+|+|+++++...|.+ .+
T Consensus 226 ~~~~~~~~~~d~~~~~~~i~~lr~~-----------~~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~ggr~~~--~g 290 (392)
T 2nzl_A 226 GLAAYVAKAIDPSISWEDIKWLRRL-----------TSLPIVAKGI--LRGDDAREAVKHGLNGILVSNHGARQLD--GV 290 (392)
T ss_dssp CHHHHHHHHBCTTCCHHHHHHHC-------------CCSCEEEEEE--CCHHHHHHHHHTTCCEEEECCGGGTSST--TC
T ss_pred hHHHHHhhcCChHHHHHHHHHHHHh-----------hCCCEEEEec--CCHHHHHHHHHcCCCEEEeCCCCCCcCC--CC
Confidence 1222 555555667777777 6889999965 33667888989 9999999887776653 46
Q ss_pred CCCC
Q psy7344 235 TGSW 238 (240)
Q Consensus 235 ~adw 238 (240)
++.|
T Consensus 291 ~~~~ 294 (392)
T 2nzl_A 291 PATI 294 (392)
T ss_dssp CCHH
T ss_pred cChH
Confidence 6555
No 36
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=98.44 E-value=6.3e-08 Score=89.46 Aligned_cols=137 Identities=12% Similarity=0.061 Sum_probs=87.5
Q ss_pred CCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhccc-------------------------------------
Q psy7344 14 HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVS------------------------------------- 56 (240)
Q Consensus 14 ~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~------------------------------------- 56 (240)
++|.|+||++||..+ |..++++++.+.+|+.++. +.
T Consensus 209 ~aD~ieiNiscPnt~------Glr~lq~~~~l~~il~~v~-~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~ 281 (443)
T 1tv5_A 209 YADYIAINVSSPNTP------GLRDNQEAGKLKNIILSVK-EEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMM 281 (443)
T ss_dssp GCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHH-HHHHHHC--------------------------------
T ss_pred CCCEEEEeccCCCCc------ccccccCHHHHHHHHHHHH-HHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhh
Confidence 689999999999974 6788999999999998876 22
Q ss_pred -------------CCCc-eeecccccccCCC---ccccc-----cCchhhhhhhhccccee------------eeC----
Q psy7344 57 -------------KNGP-LFMGPLFIAEPHC---DGIDI-----NIGCPQMVAKRGHYGAY------------LQD---- 98 (240)
Q Consensus 57 -------------~~~p-~~vk~~~~lap~~---~~~dl-----~~gC~~~i~~~g~~ga~------------l~~---- 98 (240)
.+.| +++|.. |.. +..++ ..| ...+++++++... +..
T Consensus 282 ~~~~~~~~~~~~~~~~P~V~vKis----pd~~~ed~~~iA~~~~~aG-aDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~ 356 (443)
T 1tv5_A 282 KDAKDNFLWFNTTKKKPLVFVKLA----PDLNQEQKKEIADVLLETN-IDGMIISNTTTQINDIKSFENKKGGVSGAKLK 356 (443)
T ss_dssp ------CCCCSSSSSCCEEEEEEC----SCCCHHHHHHHHHHHHHTT-CSEEEECCCBSCCCCCGGGTTCCSEEEEHHHH
T ss_pred hhhhhcchhcccCCCCCeEEEEeC----CCCCHHHHHHHHHHHHHcC-CCEEEEECCCcccccccccccccCCcCCCcch
Confidence 2467 788732 211 11111 233 2344444443321 100
Q ss_pred --ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 99 --DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 99 --d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
.+++++++...+. ...|+|.. +++.+..++.+++..|+|+|+++.+- +..+|+.+.+|.+.
T Consensus 357 ~~sl~~i~~v~~~v~-~~iPVIg~---GGI~s~~DA~e~l~aGAd~Vqigral-------------l~~gP~l~~~i~~~ 419 (443)
T 1tv5_A 357 DISTKFICEMYNYTN-KQIPIIAS---GGIFSGLDALEKIEAGASVCQLYSCL-------------VFNGMKSAVQIKRE 419 (443)
T ss_dssp HHHHHHHHHHHHHTT-TCSCEEEE---SSCCSHHHHHHHHHTTEEEEEESHHH-------------HHHGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCCcEEEE---CCCCCHHHHHHHHHcCCCEEEEcHHH-------------HhcChHHHHHHHHH
Confidence 1355666655442 14677655 88888889999998899999997661 11367777777766
Q ss_pred hhh
Q psy7344 177 PNM 179 (240)
Q Consensus 177 ~~~ 179 (240)
+..
T Consensus 420 l~~ 422 (443)
T 1tv5_A 420 LNH 422 (443)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 37
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=98.41 E-value=2.8e-07 Score=82.48 Aligned_cols=94 Identities=18% Similarity=0.182 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHcc-CCCEEEec---------CCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 126 SKNLTEAAKLAEP-HCDGIDIN---------IGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 126 ~~~~~~aa~~le~-~~d~Idin---------~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++++.++|+.+.+ |+|+|||| +.||........||..+..++..+.++++++++++ +.++|
T Consensus 142 i~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~av---------g~d~p 212 (343)
T 3kru_A 142 VKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNW---------PENKP 212 (343)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTS---------CTTSC
T ss_pred HHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcC---------CccCC
Confidence 4567777887755 89999999 77998655566788888888999999999999982 13789
Q ss_pred eEEeeeh----------hcHHHHHHHHhCCCCeEEE-ecccccc
Q psy7344 196 IGCPQMV----------AKRGHYGAYLQDDWPLLTE-LGKMAML 228 (240)
Q Consensus 196 vsvK~r~----------~~~~~~~~~l~~G~~~iti-h~R~~~~ 228 (240)
|++|++. +++.++++.|++-+|+|++ |||+..+
T Consensus 213 v~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~ 256 (343)
T 3kru_A 213 IFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNV 256 (343)
T ss_dssp EEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCC
T ss_pred eEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEee
Confidence 9999993 3456777777656999999 7887654
No 38
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.40 E-value=4.7e-07 Score=82.10 Aligned_cols=90 Identities=18% Similarity=0.128 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHc-c-CCCEEEecCCC---------chhhhh-cccccc-cccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 126 SKNLTEAAKLAE-P-HCDGIDINIGC---------PQMVAK-RGHYGA-YLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 126 ~~~~~~aa~~le-~-~~d~Idin~gC---------P~~~~~-~~g~G~-~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
++++.++|+.+. + |+|+|+||.+| |..-.. ...+|. .+..++..+.++++++++++ .
T Consensus 173 i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~av----------g 242 (379)
T 3aty_A 173 IPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAV----------G 242 (379)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHH----------C
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhc----------C
Confidence 445667777765 4 89999999998 543222 344666 78888899999999999983 2
Q ss_pred CeeeEEeeeh-------------hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 193 DINIGCPQMV-------------AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 193 ~~pvsvK~r~-------------~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.-||++|++. +++.++++.|++ |+|+|.+|+|+
T Consensus 243 ~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~ 289 (379)
T 3aty_A 243 SDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGD 289 (379)
T ss_dssp GGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSC
T ss_pred CCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 2379999983 135789999999 99999999986
No 39
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=98.39 E-value=4.1e-07 Score=81.99 Aligned_cols=91 Identities=12% Similarity=0.153 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 126 SKNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 126 ~~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++++.++|+.+.+ |+|+|+||.+| |........||..+..+...+.++++++++++ +.++|
T Consensus 157 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av---------g~d~p 227 (363)
T 3l5l_A 157 KQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVW---------PENLP 227 (363)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTS---------CTTSC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHc---------CCCce
Confidence 3456777777755 89999999984 66433445677777777888999999999983 23789
Q ss_pred eEEeeeh-----------hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 196 IGCPQMV-----------AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r~-----------~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
|.+|++. +++.++++.|++ |+|+|.+|+++
T Consensus 228 V~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~ 269 (363)
T 3l5l_A 228 LTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGF 269 (363)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred EEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 9999982 245778999999 99999999865
No 40
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.38 E-value=4.8e-08 Score=85.97 Aligned_cols=144 Identities=10% Similarity=-0.038 Sum_probs=88.2
Q ss_pred cccCCCC---eecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccccccCCCcccc-----ccCc
Q psy7344 10 ETEPHCD---GIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAEPHCDGID-----INIG 81 (240)
Q Consensus 10 ~~~~~~d---~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~lap~~~~~d-----l~~g 81 (240)
+.+.++| .|+||++||.. + .+..+..+++.+.+++.++. +..+.|+++|....+.. .+..+ ...|
T Consensus 115 ~~~~g~d~~~~iein~~~P~~---~--g~~~~g~~~~~~~~ii~~vr-~~~~~Pv~vK~~~~~~~-~~~~~~a~~~~~aG 187 (314)
T 2e6f_A 115 LAPVAQEKGVLLELNLSCPNV---P--GKPQVAYDFEAMRTYLQQVS-LAYGLPFGVKMPPYFDI-AHFDTAAAVLNEFP 187 (314)
T ss_dssp HHHHHHHHCCEEEEECCCCCS---T--TCCCGGGSHHHHHHHHHHHH-HHHCSCEEEEECCCCCH-HHHHHHHHHHHTCT
T ss_pred HHHhCCCcCceEEEEcCCCCC---C--CchhhcCCHHHHHHHHHHHH-HhcCCCEEEEECCCCCH-HHHHHHHHHHHhcC
Confidence 4445678 99999999996 2 26778889999999999998 35578999874211100 00000 0122
Q ss_pred hhhhhhhhcccc-------------------e-eee------CChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHH
Q psy7344 82 CPQMVAKRGHYG-------------------A-YLQ------DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKL 135 (240)
Q Consensus 82 C~~~i~~~g~~g-------------------a-~l~------~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~ 135 (240)
+...+..+++++ . .+. ..+++++++...+ .+.|++.. +++.+..++.++
T Consensus 188 ~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~--~~ipvi~~---GGI~~~~da~~~ 262 (314)
T 2e6f_A 188 LVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC--PDKLVFGC---GGVYSGEDAFLH 262 (314)
T ss_dssp TEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC--TTSEEEEE---SSCCSHHHHHHH
T ss_pred CceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc--CCCCEEEE---CCCCCHHHHHHH
Confidence 112222222221 0 011 1145666655544 14677655 777777788888
Q ss_pred HccCCCEEEecCCCchhhhhcccccccccC-CHHHHHHHHHHhhh
Q psy7344 136 AEPHCDGIDINIGCPQMVAKRGHYGAYLQD-DWPLLTNLVYSPNM 179 (240)
Q Consensus 136 le~~~d~Idin~gCP~~~~~~~g~G~~l~~-~p~~i~~iv~~~~~ 179 (240)
+..|+|+|+++++ ++. +|+.+.++.+.++.
T Consensus 263 l~~GAd~V~ig~~--------------~l~~~p~~~~~i~~~l~~ 293 (314)
T 2e6f_A 263 ILAGASMVQVGTA--------------LQEEGPGIFTRLEDELLE 293 (314)
T ss_dssp HHHTCSSEEECHH--------------HHHHCTTHHHHHHHHHHH
T ss_pred HHcCCCEEEEchh--------------hHhcCcHHHHHHHHHHHH
Confidence 8779999999665 453 88888888876655
No 41
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=98.37 E-value=4.8e-07 Score=83.08 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=71.3
Q ss_pred HHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccc-cCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 127 KNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYL-QDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 127 ~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l-~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
+++.++|+++.+ |+|+||||.+| |..-.....||..+ ......+.+|++++++++ +. -.+.++|
T Consensus 170 ~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v---~~--~~~~~f~ 244 (419)
T 3l5a_A 170 QQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVI---DK--EAPDNFI 244 (419)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHH---HH--HCCTTCE
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHH---hh--hcCCCee
Confidence 456777777754 89999999998 76433445577777 777888999999999872 00 0013789
Q ss_pred eEEeeeh------------hcHHHHHHHHhC--CCCeEEEecccc
Q psy7344 196 IGCPQMV------------AKRGHYGAYLQD--DWPLLTELGKMA 226 (240)
Q Consensus 196 vsvK~r~------------~~~~~~~~~l~~--G~~~itih~R~~ 226 (240)
|++|++. +++.++++.|++ |+|+|+||+++.
T Consensus 245 v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~ 289 (419)
T 3l5a_A 245 LGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGR 289 (419)
T ss_dssp EEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTC
T ss_pred EEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCc
Confidence 9999972 346788898876 999999999986
No 42
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=98.31 E-value=1.3e-06 Score=78.08 Aligned_cols=92 Identities=8% Similarity=-0.009 Sum_probs=61.0
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHH--HHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPL--LTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~--i~~iv~~~~~~~~~i~~~~~~ 190 (240)
+.|+++|+. +.+++.+.++++. .++|+|+||.+||+...... .+++. +.++++++++.
T Consensus 116 ~~pv~~~i~~~~~~~~~~~~~~~--~gad~i~i~~~~~~~~~~~~-------~~~~~~~~~~~i~~vr~~---------- 176 (349)
T 1p0k_A 116 NGLIFANLGSEATAAQAKEAVEM--IGANALQIHLNVIQEIVMPE-------GDRSFSGALKRIEQICSR---------- 176 (349)
T ss_dssp SSCEEEEEETTCCHHHHHHHHHH--TTCSEEEEEECTTTTC---------------CTTHHHHHHHHHHH----------
T ss_pred CceeEEeecCCCCHHHHHHHHHh--cCCCeEEecccchhhhcCCC-------CCcchHHHHHHHHHHHHH----------
Confidence 579999998 6777765544332 37999999999998533221 13322 45677777776
Q ss_pred CCCeeeEEeee-hhcHHHHHHHHhC-CCCeEEE--eccc
Q psy7344 191 GNDINIGCPQM-VAKRGHYGAYLQD-DWPLLTE--LGKM 225 (240)
Q Consensus 191 ~~~~pvsvK~r-~~~~~~~~~~l~~-G~~~iti--h~R~ 225 (240)
+++||.+|+. .....+.++.+++ |+|+|++ ||+|
T Consensus 177 -~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt 214 (349)
T 1p0k_A 177 -VSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGT 214 (349)
T ss_dssp -CSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC----
T ss_pred -cCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCc
Confidence 6889999984 3334677899999 9999999 8886
No 43
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.31 E-value=2.5e-07 Score=82.23 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=84.5
Q ss_pred CCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccC---------CCceeecccccccCCCcccc-----c
Q psy7344 13 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSK---------NGPLFMGPLFIAEPHCDGID-----I 78 (240)
Q Consensus 13 ~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~---------~~p~~vk~~~~lap~~~~~d-----l 78 (240)
.++|.|+||++||..+ |..+++++.++.+++.++. +.. +.|+++|....+.. .+..+ .
T Consensus 164 ~g~d~iein~~sP~~~------g~~~~~~~~~~~~il~~vr-~~~~~~~~~~g~~~Pv~vKi~~~~~~-~~~~~~a~~l~ 235 (336)
T 1f76_A 164 AYAGYIAINISSPNTP------GLRTLQYGEALDDLLTAIK-NKQNDLQAMHHKYVPIAVKIAPDLSE-EELIQVADSLV 235 (336)
T ss_dssp GGCSEEEEECCCSSST------TGGGGGSHHHHHHHHHHHH-HHHHHHHHHHTSCCCEEEECCSCCCH-HHHHHHHHHHH
T ss_pred ccCCEEEEEccCCCCC------CcccccCHHHHHHHHHHHH-HHHHhhhhcccccCceEEEecCCCCH-HHHHHHHHHHH
Confidence 3799999999999843 3446778999999999888 344 68999873211000 00000 0
Q ss_pred cCchhhhhhhhccc---------------ceeee-----CChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHcc
Q psy7344 79 NIGCPQMVAKRGHY---------------GAYLQ-----DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEP 138 (240)
Q Consensus 79 ~~gC~~~i~~~g~~---------------ga~l~-----~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~ 138 (240)
..| ...+.+++++ |.+.. ..+++++++...+. .+.|++.. +++.+..++.++++.
T Consensus 236 ~~G-vd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~-~~ipVi~~---GGI~~~~da~~~l~~ 310 (336)
T 1f76_A 236 RHN-IDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELN-GRLPIIGV---GGIDSVIAAREKIAA 310 (336)
T ss_dssp HTT-CSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHT-TSSCEEEE---SSCCSHHHHHHHHHH
T ss_pred HcC-CcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhC-CCCCEEEE---CCCCCHHHHHHHHHC
Confidence 223 2233333221 11110 11355555554442 24687765 777778888888888
Q ss_pred CCCEEEecCCCchhhhhcccccccccC-CHHHHHHHHHH
Q psy7344 139 HCDGIDINIGCPQMVAKRGHYGAYLQD-DWPLLTNLVYS 176 (240)
Q Consensus 139 ~~d~Idin~gCP~~~~~~~g~G~~l~~-~p~~i~~iv~~ 176 (240)
|+|+|+++++ ++. +|+.+.++.+.
T Consensus 311 GAd~V~igr~--------------~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 311 GASLVQIYSG--------------FIFKGPPLIKEIVTH 335 (336)
T ss_dssp TCSEEEESHH--------------HHHHCHHHHHHHHHH
T ss_pred CCCEEEeeHH--------------HHhcCcHHHHHHHhh
Confidence 9999999766 455 89999888764
No 44
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=98.31 E-value=1.7e-07 Score=83.78 Aligned_cols=147 Identities=14% Similarity=0.100 Sum_probs=94.9
Q ss_pred cccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccc--cccC---CCcc
Q psy7344 10 ETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLF--IAEP---HCDG 75 (240)
Q Consensus 10 ~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~--~lap---~~~~ 75 (240)
..+.|+|.|+||+|| |..+.+...||..|++++.++.+++.++. +..+.|+.+|..- +... ..+.
T Consensus 153 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr-~~v~~pv~vRls~~~~~~~g~~~~~~ 231 (340)
T 3gr7_A 153 AKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVR-EVWDGPLFVRISASDYHPDGLTAKDY 231 (340)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHCCSCEEEEEESCCCSTTSCCGGGH
T ss_pred HHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHH-HhcCCceEEEeccccccCCCCCHHHH
Confidence 345689999999995 98776666788889999999999999999 4668888886321 1100 0111
Q ss_pred ccc-----cCchhhhhhhh-ccccee---e--eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CCEE
Q psy7344 76 IDI-----NIGCPQMVAKR-GHYGAY---L--QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CDGI 143 (240)
Q Consensus 76 ~dl-----~~gC~~~i~~~-g~~ga~---l--~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d~I 143 (240)
.++ ..| ...+.++ |++... . ..+++++..++..+ ..|+++. ++..+..++.++++.+ +|.|
T Consensus 232 ~~la~~L~~~G-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~---~iPVi~~---GgI~s~e~a~~~L~~G~aD~V 304 (340)
T 3gr7_A 232 VPYAKRMKEQG-VDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA---DIPTGAV---GLITSGWQAEEILQNGRADLV 304 (340)
T ss_dssp HHHHHHHHHTT-CCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT---TCCEEEE---SSCCCHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHcC-CCEEEEecCCccCCCCCCCccccHHHHHHHHHHc---CCcEEee---CCCCCHHHHHHHHHCCCeeEE
Confidence 111 222 2223333 111110 0 11356666665544 3677654 6655666777888886 9999
Q ss_pred EecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 144 DINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 144 din~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
.++++ ++.||+++.++.+.+.
T Consensus 305 ~iGR~--------------~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 305 FLGRE--------------LLRNPYWPYAAARELG 325 (340)
T ss_dssp EECHH--------------HHHCTTHHHHHHHHTT
T ss_pred EecHH--------------HHhCchHHHHHHHHCC
Confidence 99766 6789999999988754
No 45
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=98.22 E-value=2.7e-06 Score=76.78 Aligned_cols=95 Identities=12% Similarity=0.019 Sum_probs=65.0
Q ss_pred CceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhh--------------------hhc-------ccccccc--
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMV--------------------AKR-------GHYGAYL-- 163 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~--------------------~~~-------~g~G~~l-- 163 (240)
.|..+|+. +.|.+...++++.+++ |++.|+|+.+||..- ... ...|+.+
T Consensus 123 ~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 202 (370)
T 1gox_A 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSS 202 (370)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHH
T ss_pred CCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHH
Confidence 57899985 7899888888888865 899999999998640 000 1123322
Q ss_pred ----cCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEe
Q psy7344 164 ----QDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 164 ----~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih 222 (240)
+.+|....+.++++++. +++||.+|.... .+.++.+++ |+|+|++.
T Consensus 203 ~v~~~~~~~~~~~~i~~l~~~-----------~~~pv~vK~~~~--~e~a~~a~~~Gad~I~vs 253 (370)
T 1gox_A 203 YVAGQIDRSLSWKDVAWLQTI-----------TSLPILVKGVIT--AEDARLAVQHGAAGIIVS 253 (370)
T ss_dssp HHHHTBCTTCCHHHHHHHHHH-----------CCSCEEEECCCS--HHHHHHHHHTTCSEEEEC
T ss_pred HHHhhcCccchHHHHHHHHHH-----------hCCCEEEEecCC--HHHHHHHHHcCCCEEEEC
Confidence 22333333456666666 678999999843 467788888 99999993
No 46
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=98.20 E-value=1.8e-07 Score=83.40 Aligned_cols=149 Identities=16% Similarity=0.141 Sum_probs=95.2
Q ss_pred ccccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccc--cccCCC---c
Q psy7344 9 IETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLF--IAEPHC---D 74 (240)
Q Consensus 9 ~~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~--~lap~~---~ 74 (240)
...+.|+|.|+||+|| |..+.+...||..|++++.++.+++.++. +..+.|+.+|... +..... +
T Consensus 152 ~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr-~~v~~pv~vris~~~~~~~g~~~~~ 230 (338)
T 1z41_A 152 RAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVK-QVWDGPLFVRVSASDYTDKGLDIAD 230 (338)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHCCSCEEEEEECCCCSTTSCCHHH
T ss_pred HHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHH-HHcCCcEEEEecCcccCCCCCCHHH
Confidence 3456789999999998 87665556688889999999999999998 4667888887321 111000 0
Q ss_pred cccc-----cCchhhhhhhhcccc--e--ee--eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CCE
Q psy7344 75 GIDI-----NIGCPQMVAKRGHYG--A--YL--QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CDG 142 (240)
Q Consensus 75 ~~dl-----~~gC~~~i~~~g~~g--a--~l--~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d~ 142 (240)
..++ ..| ...+.+++++. . .. ..+++++..++..+ +.|+++. ++..+..++.++++.+ +|.
T Consensus 231 ~~~~a~~l~~~G-vd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~---Ggi~s~~~a~~~l~~G~aD~ 303 (338)
T 1z41_A 231 HIGFAKWMKEQG-VDLIDCSSGALVHADINVFPGYQVSFAEKIREQA---DMATGAV---GMITDGSMAEEILQNGRADL 303 (338)
T ss_dssp HHHHHHHHHHTT-CCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH---CCEEEEC---SSCCSHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHcC-CCEEEEecCccccCCCCCCccchHHHHHHHHHHC---CCCEEEE---CCCCCHHHHHHHHHcCCceE
Confidence 0101 222 22333333221 1 00 01345666665543 3676543 6666667788888886 999
Q ss_pred EEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 143 IDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 143 Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
|.++++ ++.||+++.++.+.+.+
T Consensus 304 V~iGR~--------------~i~nPdl~~ki~~~~~~ 326 (338)
T 1z41_A 304 IFIGRE--------------LLRDPFFARTAAKQLNT 326 (338)
T ss_dssp EEECHH--------------HHHCTTHHHHHHHHTTC
T ss_pred EeecHH--------------HHhCchHHHHHHcCCCc
Confidence 998666 57899999999877543
No 47
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=98.19 E-value=1.9e-06 Score=78.72 Aligned_cols=93 Identities=18% Similarity=0.171 Sum_probs=71.1
Q ss_pred HH-HHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 127 KN-LTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 127 ~~-~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++ +.++|+.+.+ |+|+||||.+| |........||..+..+...+.+|++++++++ ...|
T Consensus 167 ~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~----------~~~~ 236 (407)
T 3tjl_A 167 YEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIV----------GADK 236 (407)
T ss_dssp HTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH----------CGGG
T ss_pred HHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHh----------CCCe
Confidence 44 6777777754 89999999999 75333344577778888999999999999984 2237
Q ss_pred eEEeeeh-h---------c-------HHHHHHHH---hC-C--CCeEEEe-ccccccc
Q psy7344 196 IGCPQMV-A---------K-------RGHYGAYL---QD-D--WPLLTEL-GKMAMLV 229 (240)
Q Consensus 196 vsvK~r~-~---------~-------~~~~~~~l---~~-G--~~~itih-~R~~~~~ 229 (240)
|++|++. + + +.++++.| ++ | +++|++| +|+..+.
T Consensus 237 v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~ 294 (407)
T 3tjl_A 237 IGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNV 294 (407)
T ss_dssp EEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTE
T ss_pred EEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCC
Confidence 9999992 1 2 36788889 88 9 9999999 8876653
No 48
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.18 E-value=2.7e-06 Score=82.43 Aligned_cols=91 Identities=12% Similarity=-0.032 Sum_probs=70.7
Q ss_pred HHHHHHHHHHcc-CCCEEEecCCCch-h---------hhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 127 KNLTEAAKLAEP-HCDGIDINIGCPQ-M---------VAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 127 ~~~~~aa~~le~-~~d~Idin~gCP~-~---------~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
+++.++|+.+.+ |+|+|||+.+|+. - -.....||..+..+...+.+|++++++++ +.++|
T Consensus 156 ~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~---------g~~~~ 226 (690)
T 3k30_A 156 RWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDEC---------AGRAA 226 (690)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---------TTSSE
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHh---------CCCce
Confidence 678888888765 8999999999876 1 11223467778778889999999999983 13679
Q ss_pred eEEeee----------hhcHHHHHHHHhCCCCeEEEecccc
Q psy7344 196 IGCPQM----------VAKRGHYGAYLQDDWPLLTELGKMA 226 (240)
Q Consensus 196 vsvK~r----------~~~~~~~~~~l~~G~~~itih~R~~ 226 (240)
|.+|+. .++..++++.|++|+|+|++|+++.
T Consensus 227 v~~r~s~~~~~~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~ 267 (690)
T 3k30_A 227 VACRITVEEEIDGGITREDIEGVLRELGELPDLWDFAMGSW 267 (690)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHTTSSSEEEEECSCH
T ss_pred EEEEECccccCCCCCCHHHHHHHHHHHHhhcCEEEEecccc
Confidence 999996 2456788888877999999999863
No 49
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=98.16 E-value=1.5e-06 Score=75.88 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=84.5
Q ss_pred ccc-CCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccccccCCCccccc-----cCchh
Q psy7344 10 ETE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAEPHCDGIDI-----NIGCP 83 (240)
Q Consensus 10 ~~~-~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~lap~~~~~dl-----~~gC~ 83 (240)
+.+ .++|.|+||++||..+ + .|..+..+++++.+++.++. +..+.|+.+|... .+.+..++ ..| .
T Consensus 120 ~~~~~g~d~iei~~~~p~~~--~--g~~~~g~~~~~~~eii~~v~-~~~~~pv~vk~~~---~~~~~~~~a~~l~~~G-~ 190 (311)
T 1ep3_A 120 IGDAANVKAIELNISCPNVK--H--GGQAFGTDPEVAAALVKACK-AVSKVPLYVKLSP---NVTDIVPIAKAVEAAG-A 190 (311)
T ss_dssp HTTSTTEEEEEEECCSEEGG--G--TTEEGGGCHHHHHHHHHHHH-HHCSSCEEEEECS---CSSCSHHHHHHHHHTT-C
T ss_pred HhccCCCCEEEEeCCCCCCC--C--chhhhcCCHHHHHHHHHHHH-HhcCCCEEEEECC---ChHHHHHHHHHHHHcC-C
Confidence 344 6799999999999842 2 26777789999999999998 3557898886321 11111110 222 1
Q ss_pred hhhhh---------hccc---------ceee-eCC----hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCC
Q psy7344 84 QMVAK---------RGHY---------GAYL-QDD----WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHC 140 (240)
Q Consensus 84 ~~i~~---------~g~~---------ga~l-~~d----~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~ 140 (240)
..+.. |.++ +.+. ... ++++.++...+ +.|+++. +.+.+..++.++++.|+
T Consensus 191 d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~---~ipvia~---GGI~~~~d~~~~l~~GA 264 (311)
T 1ep3_A 191 DGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV---DIPIIGM---GGVANAQDVLEMYMAGA 264 (311)
T ss_dssp SEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC---SSCEEEC---SSCCSHHHHHHHHHHTC
T ss_pred CEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc---CCCEEEE---CCcCCHHHHHHHHHcCC
Confidence 11111 1111 1111 111 24555554332 4677654 55656667777777799
Q ss_pred CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 141 DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 141 d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
|+|.++.+ ++.+|+.+.++.+.++.
T Consensus 265 d~V~vg~~--------------~l~~p~~~~~i~~~l~~ 289 (311)
T 1ep3_A 265 SAVAVGTA--------------NFADPFVCPKIIDKLPE 289 (311)
T ss_dssp SEEEECTH--------------HHHCTTHHHHHHHHHHH
T ss_pred CEEEECHH--------------HHcCcHHHHHHHHHHHH
Confidence 99998766 44578888888776654
No 50
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=98.13 E-value=4.7e-06 Score=78.26 Aligned_cols=110 Identities=8% Similarity=-0.075 Sum_probs=75.1
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchh----hhhcc-------------------ccc-cccc---
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQM----VAKRG-------------------HYG-AYLQ--- 164 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~----~~~~~-------------------g~G-~~l~--- 164 (240)
..|...||. +.|.+.+.+++++++. |+++|.|+..||+. ...+. +.| +.++
T Consensus 246 ~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~ 325 (511)
T 1kbi_A 246 KQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKF 325 (511)
T ss_dssp SCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTT
T ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhc
Confidence 468899997 7899999999999876 89999999999971 11111 111 1122
Q ss_pred CCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCC
Q psy7344 165 DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSW 238 (240)
Q Consensus 165 ~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw 238 (240)
.+|....++++++++. +++||++|.-.. .+.++.+++ |+|+|+++++...|.+ .+.+.|
T Consensus 326 ~d~~~~~~~i~~lr~~-----------~~~PvivKgv~~--~e~A~~a~~aGad~I~vs~hgG~~~d--~~~~~~ 385 (511)
T 1kbi_A 326 IDPSLTWKDIEELKKK-----------TKLPIVIKGVQR--TEDVIKAAEIGVSGVVLSNHGGRQLD--FSRAPI 385 (511)
T ss_dssp BCTTCCHHHHHHHHHH-----------CSSCEEEEEECS--HHHHHHHHHTTCSEEEECCTTTTSST--TCCCHH
T ss_pred cChHhHHHHHHHHHHH-----------hCCcEEEEeCCC--HHHHHHHHHcCCCEEEEcCCCCccCC--CCCchH
Confidence 3444445567777776 688999996432 567888889 9999999555444543 344444
No 51
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=98.12 E-value=6.3e-07 Score=81.21 Aligned_cols=142 Identities=8% Similarity=-0.034 Sum_probs=90.4
Q ss_pred ccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccCC-Cceeecccc--cccCCCccccc
Q psy7344 11 TEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKN-GPLFMGPLF--IAEPHCDGIDI 78 (240)
Q Consensus 11 ~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~-~p~~vk~~~--~lap~~~~~dl 78 (240)
.+.|+|.|+||+|| |..+.+...||..|++++.++.++|.++. +... .|+.++... ....+.+..+.
T Consensus 176 ~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr-~avg~~~v~vrls~~~~~~~~~~~~~~ 254 (377)
T 2r14_A 176 KRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVA-EVFGPERVGIRLTPFLELFGLTDDEPE 254 (377)
T ss_dssp HHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHHCGGGEEEEECTTCCCTTCCCSCHH
T ss_pred HHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHH-HHcCCCcEEEEeccccccCCCCCCCCH
Confidence 45689999999998 98776666788889999999999999988 3443 388876321 11111111111
Q ss_pred -----------cCchhhhhhhhcccce--eeeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CCEEE
Q psy7344 79 -----------NIGCPQMVAKRGHYGA--YLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CDGID 144 (240)
Q Consensus 79 -----------~~gC~~~i~~~g~~ga--~l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d~Id 144 (240)
..| ...+.+++++.. .-..+++++..++..+ ..|++.. ++. +..++.++++++ +|+|+
T Consensus 255 ~~~~~la~~le~~G-vd~i~v~~~~~~~~~~~~~~~~~~~ik~~~---~iPvi~~---Ggi-~~~~a~~~l~~g~aD~V~ 326 (377)
T 2r14_A 255 AMAFYLAGELDRRG-LAYLHFNEPDWIGGDITYPEGFREQMRQRF---KGGLIYC---GNY-DAGRAQARLDDNTADAVA 326 (377)
T ss_dssp HHHHHHHHHHHHTT-CSEEEEECCC------CCCTTHHHHHHHHC---CSEEEEE---SSC-CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHcC-CCEEEEeCCcccCCCCcchHHHHHHHHHHC---CCCEEEE---CCC-CHHHHHHHHHCCCceEEe
Confidence 223 233344433211 0012466777766554 3677654 555 467788888885 99999
Q ss_pred ecCCCchhhhhcccccccccCCHHHHHHHHH
Q psy7344 145 INIGCPQMVAKRGHYGAYLQDDWPLLTNLVY 175 (240)
Q Consensus 145 in~gCP~~~~~~~g~G~~l~~~p~~i~~iv~ 175 (240)
++++ ++.||+++.++.+
T Consensus 327 igR~--------------~l~~P~l~~k~~~ 343 (377)
T 2r14_A 327 FGRP--------------FIANPDLPERFRL 343 (377)
T ss_dssp ESHH--------------HHHCTTHHHHHHH
T ss_pred ecHH--------------HHhCchHHHHHHc
Confidence 9776 6789999888875
No 52
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=98.09 E-value=3.2e-07 Score=83.11 Aligned_cols=144 Identities=10% Similarity=-0.012 Sum_probs=89.8
Q ss_pred ccccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccCC-Cceeecccc--cccCCCcc-
Q psy7344 9 IETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKN-GPLFMGPLF--IAEPHCDG- 75 (240)
Q Consensus 9 ~~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~-~p~~vk~~~--~lap~~~~- 75 (240)
...+.|+|.|+||+|| |..+.+...||..|++++.++.++|.++. ++.. .|+.++... ....+.+.
T Consensus 175 ~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr-~avg~~~V~vrls~~~~~~g~~~~~ 253 (376)
T 1icp_A 175 NAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVA-NEIGSDRVGIRISPFAHYNEAGDTN 253 (376)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHHCGGGEEEEECTTCCTTTCCCSC
T ss_pred HHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHH-HHhcCCceEEEeccccccCCCCCCC
Confidence 3456789999999998 87666556688779999999999999998 3543 388876321 11111110
Q ss_pred -----ccc-----cCchhhhhhhhcccce-ee--eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CC
Q psy7344 76 -----IDI-----NIGCPQMVAKRGHYGA-YL--QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CD 141 (240)
Q Consensus 76 -----~dl-----~~gC~~~i~~~g~~ga-~l--~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d 141 (240)
+.+ ..| ...+.+++++.. .. ..+++++..++..+ ..|++.. ++. +..++.++++++ +|
T Consensus 254 ~~~~~~~la~~le~~G-vd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~---~iPvi~~---G~i-~~~~a~~~l~~g~aD 325 (376)
T 1icp_A 254 PTALGLYMVESLNKYD-LAYCHVVEPRMKTAWEKIECTESLVPMRKAY---KGTFIVA---GGY-DREDGNRALIEDRAD 325 (376)
T ss_dssp HHHHHHHHHHHHGGGC-CSEEEEECCSCCC------CCCCSHHHHHHC---CSCEEEE---SSC-CHHHHHHHHHTTSCS
T ss_pred CHHHHHHHHHHHHHcC-CCEEEEcCCcccCCCCccccHHHHHHHHHHc---CCCEEEe---CCC-CHHHHHHHHHCCCCc
Confidence 111 223 233344433210 00 12355555655443 3677654 556 567788888875 99
Q ss_pred EEEecCCCchhhhhcccccccccCCHHHHHHHHH
Q psy7344 142 GIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVY 175 (240)
Q Consensus 142 ~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~ 175 (240)
.|+++++ ++.||+++.++.+
T Consensus 326 ~V~~gR~--------------~l~~P~l~~k~~~ 345 (376)
T 1icp_A 326 LVAYGRL--------------FISNPDLPKRFEL 345 (376)
T ss_dssp EEEESHH--------------HHHCTTHHHHHHH
T ss_pred EEeecHH--------------HHhCccHHHHHHc
Confidence 9999777 5789999988875
No 53
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=98.04 E-value=6.6e-07 Score=80.68 Aligned_cols=144 Identities=13% Similarity=0.021 Sum_probs=88.9
Q ss_pred cccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccCC-Cceeecccc--cccCCCcccc
Q psy7344 10 ETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKN-GPLFMGPLF--IAEPHCDGID 77 (240)
Q Consensus 10 ~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~-~p~~vk~~~--~lap~~~~~d 77 (240)
..+.|+|.|+||+|| |..+.+...||..|++++.++.+++.++. +... .|+.+|... ....+.+..+
T Consensus 170 a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr-~~vg~~pv~vris~~~~~~~~~~~~~ 248 (365)
T 2gou_A 170 AMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALV-DAIGAERVGVRLAPLTTLNGTVDADP 248 (365)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHH-HHHCGGGEEEEECSSCCTTSCCCSSH
T ss_pred HHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHH-HHcCCCcEEEEEccccccCCCCCCCC
Confidence 356789999999998 77655556688889999999999999887 3442 388876321 1101111111
Q ss_pred c-----------cCchhhhhhhhccccee-eeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CCEEE
Q psy7344 78 I-----------NIGCPQMVAKRGHYGAY-LQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CDGID 144 (240)
Q Consensus 78 l-----------~~gC~~~i~~~g~~ga~-l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d~Id 144 (240)
. ..| ...+.+++++-.. -...+++++.++..+ ..|++.. ++. +..++.++++++ +|+|+
T Consensus 249 ~~~~~~~a~~l~~~G-~d~i~v~~~~~~~~~~~~~~~~~~i~~~~---~iPvi~~---Ggi-~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 249 ILTYTAAAALLNKHR-IVYLHIAEVDWDDAPDTPVSFKRALREAY---QGVLIYA---GRY-NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp HHHHHHHHHHHHHTT-CSEEEEECCBTTBCCCCCHHHHHHHHHHC---CSEEEEE---SSC-CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHcC-CCEEEEeCCCcCCCCCccHHHHHHHHHHC---CCcEEEe---CCC-CHHHHHHHHHCCCcceeh
Confidence 1 122 1223333321000 001246666665544 3676654 555 567788888886 99999
Q ss_pred ecCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 145 INIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 145 in~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
++++ ++.||+++.++.+.
T Consensus 321 igR~--------------~i~~P~l~~~~~~g 338 (365)
T 2gou_A 321 FGRP--------------FIANPDLPERLRHG 338 (365)
T ss_dssp CCHH--------------HHHCTTHHHHHHHT
T ss_pred hcHH--------------HHhCchHHHHHHcC
Confidence 8766 56899998888753
No 54
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=98.01 E-value=8.9e-07 Score=79.81 Aligned_cols=142 Identities=11% Similarity=-0.007 Sum_probs=87.9
Q ss_pred ccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccCC-Cceeeccccc--ccCC-Ccccc
Q psy7344 11 TEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKN-GPLFMGPLFI--AEPH-CDGID 77 (240)
Q Consensus 11 ~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~-~p~~vk~~~~--lap~-~~~~d 77 (240)
.+.|+|.|+||+|| |..+.+...||..|++++.++.+++.++. +... .|+.+|.... ...+ .+..+
T Consensus 171 ~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr-~~vg~~~v~vrls~~~~~~~~~~~~~~ 249 (364)
T 1vyr_A 171 REAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVC-NEWSADRIGIRVSPIGTFQNVDNGPNE 249 (364)
T ss_dssp HHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHH-HHSCGGGEEEEECCSSCBTTBCCCTTH
T ss_pred HHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHH-HhcCCCcEEEEEccccccccccCCCCC
Confidence 56789999999998 77555555678779999999999999998 3542 3887752211 0000 00001
Q ss_pred c-----------cCchhhhhhhhcccce-eeeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CCEEE
Q psy7344 78 I-----------NIGCPQMVAKRGHYGA-YLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CDGID 144 (240)
Q Consensus 78 l-----------~~gC~~~i~~~g~~ga-~l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d~Id 144 (240)
+ ..| ...+.+++++-. .-...++++..++..+ ..|++.. ++. +..++.++++++ +|+|+
T Consensus 250 ~~~~~~~a~~l~~~G-~d~i~v~~~~~~~~~~~~~~~~~~v~~~~---~iPvi~~---Ggi-t~~~a~~~l~~g~aD~V~ 321 (364)
T 1vyr_A 250 EADALYLIEELAKRG-IAYLHMSETDLAGGKPYSEAFRQKVRERF---HGVIIGA---GAY-TAEKAEDLIGKGLIDAVA 321 (364)
T ss_dssp HHHHHHHHHHHHHTT-CSEEEEECCBTTBCCCCCHHHHHHHHHHC---CSEEEEE---SSC-CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHhC-CCEEEEecCcccCCCcccHHHHHHHHHHC---CCCEEEE---CCc-CHHHHHHHHHCCCccEEE
Confidence 1 122 222333322100 0012356666665544 3676654 555 567788888886 99999
Q ss_pred ecCCCchhhhhcccccccccCCHHHHHHHHH
Q psy7344 145 INIGCPQMVAKRGHYGAYLQDDWPLLTNLVY 175 (240)
Q Consensus 145 in~gCP~~~~~~~g~G~~l~~~p~~i~~iv~ 175 (240)
++++ ++.||+++.++.+
T Consensus 322 ~gR~--------------~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 322 FGRD--------------YIANPDLVARLQK 338 (364)
T ss_dssp ESHH--------------HHHCTTHHHHHHH
T ss_pred ECHH--------------HHhChhHHHHHHc
Confidence 9766 5689999888875
No 55
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=97.98 E-value=2.2e-06 Score=76.81 Aligned_cols=148 Identities=11% Similarity=0.077 Sum_probs=91.7
Q ss_pred cccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccC--CCceeeccc--ccccCCCc--
Q psy7344 10 ETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSK--NGPLFMGPL--FIAEPHCD-- 74 (240)
Q Consensus 10 ~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~--~~p~~vk~~--~~lap~~~-- 74 (240)
..+.|+|.|+||++| |..+.+...||..+.++..++.+++.++. +.. +.|+.++.. .+.....+
T Consensus 161 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR-~avG~d~pV~vRls~~~~~~~g~~~~ 239 (349)
T 3hgj_A 161 ALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVR-EVVPRELPLFVRVSATDWGEGGWSLE 239 (349)
T ss_dssp HHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHSCTTSCEEEEEESCCCSTTSCCHH
T ss_pred HHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHH-HHhcCCceEEEEeccccccCCCCCHH
Confidence 445789999999999 99877777899889999999999999988 354 567777521 11100000
Q ss_pred -cccc-----cCchhhhhhhh-ccccee--e----eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-C
Q psy7344 75 -GIDI-----NIGCPQMVAKR-GHYGAY--L----QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-C 140 (240)
Q Consensus 75 -~~dl-----~~gC~~~i~~~-g~~ga~--l----~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~ 140 (240)
.+.+ ..| ...+.++ |++... . ..+++++..+...+ ..|++.. +...+..++.+.++++ +
T Consensus 240 ~~~~la~~L~~~G-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~---Ggi~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 240 DTLAFARRLKELG-VDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV---GLRTGAV---GLITTPEQAETLLQAGSA 312 (349)
T ss_dssp HHHHHHHHHHHTT-CCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH---CCEEEEC---SSCCCHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHcC-CCEEEEecCCcCcccccCCCccccHHHHHHHHHHc---CceEEEE---CCCCCHHHHHHHHHCCCc
Confidence 0000 112 1222222 111100 0 01345555555443 3566543 5555556677888886 9
Q ss_pred CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 141 DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 141 d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
|.|.++++ ++.||+++.++.+.+..
T Consensus 313 D~V~iGR~--------------~lanPdl~~k~~~~l~~ 337 (349)
T 3hgj_A 313 DLVLLGRV--------------LLRDPYFPLRAAKALGV 337 (349)
T ss_dssp SEEEESTH--------------HHHCTTHHHHHHHHTTC
T ss_pred eEEEecHH--------------HHhCchHHHHHHHHCCC
Confidence 99999776 67899999999887643
No 56
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=97.94 E-value=9.2e-07 Score=79.70 Aligned_cols=139 Identities=13% Similarity=0.030 Sum_probs=87.3
Q ss_pred cccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccC-CCceeeccccc--ccCCCcccc
Q psy7344 10 ETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSK-NGPLFMGPLFI--AEPHCDGID 77 (240)
Q Consensus 10 ~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~-~~p~~vk~~~~--lap~~~~~d 77 (240)
..+.|+|.|+||++| |.-+-+...||..|.++..++.+++.++. +.. ..|+.++..-. ...+.+...
T Consensus 162 a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr-~~vg~~~v~vRls~~~~~~g~~~~~~ 240 (362)
T 4ab4_A 162 AKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAI-EVWGAQRVGVHLAPRADAHDMGDADR 240 (362)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHHCGGGEEEEECTTCCSSSCCCTTH
T ss_pred HHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHH-HhcCCCceEEEeeccccccccCCCCc
Confidence 456789999999999 97666666788889999999999999998 354 23887763211 011100000
Q ss_pred c-----------cCchhhhhhhhcccceeeeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CCEEEe
Q psy7344 78 I-----------NIGCPQMVAKRGHYGAYLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CDGIDI 145 (240)
Q Consensus 78 l-----------~~gC~~~i~~~g~~ga~l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d~Idi 145 (240)
. ..| ...+.+++++ ..++++..++..+ ..|+++. ++. +..++.++++++ +|.|.+
T Consensus 241 ~~~~~~la~~l~~~G-vd~i~v~~~~-----~~~~~~~~ik~~~---~iPvi~~---Ggi-t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 241 AETFTYVARELGKRG-IAFICSRERE-----ADDSIGPLIKEAF---GGPYIVN---ERF-DKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHHHHHHHHTT-CSEEEEECCC-----CTTCCHHHHHHHH---CSCEEEE---SSC-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHHhC-CCEEEECCCC-----CCHHHHHHHHHHC---CCCEEEe---CCC-CHHHHHHHHHcCCccEEEE
Confidence 0 111 1112222211 1125566665544 3677655 455 666777888875 999999
Q ss_pred cCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 146 NIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 146 n~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
+++ ++.||+++.++.+.
T Consensus 308 GR~--------------~lanPdl~~k~~~g 324 (362)
T 4ab4_A 308 GVP--------------FIANPDLPARLAAD 324 (362)
T ss_dssp SHH--------------HHHCTTHHHHHHTT
T ss_pred CHH--------------hHhCcHHHHHHHcC
Confidence 776 67899988887764
No 57
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=97.93 E-value=1.3e-06 Score=78.65 Aligned_cols=142 Identities=12% Similarity=0.047 Sum_probs=87.9
Q ss_pred cccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccC-CCceeeccccc--ccCCCcccc
Q psy7344 10 ETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSK-NGPLFMGPLFI--AEPHCDGID 77 (240)
Q Consensus 10 ~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~-~~p~~vk~~~~--lap~~~~~d 77 (240)
..+.|+|.|+||++| |..+-+...||..|.+...++.+++.++. +.. ..|+.++..-. ...+.+...
T Consensus 170 A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr-~~vg~~~v~vRls~~~~~~g~~~~~~ 248 (361)
T 3gka_A 170 ARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAI-DVWSAARVGVHLAPRGDAHTMGDSDP 248 (361)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHH-HHHCGGGEEEEECTTCCSSSCCCSCH
T ss_pred HHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHH-HHcCCCeEEEecccccccCCCCCCCc
Confidence 456789999999999 98777666788889999999999999998 354 23877763211 011110000
Q ss_pred cc-Cc-hhhhhhhhcccce-ee--e---CChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CCEEEecCC
Q psy7344 78 IN-IG-CPQMVAKRGHYGA-YL--Q---DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CDGIDINIG 148 (240)
Q Consensus 78 l~-~g-C~~~i~~~g~~ga-~l--~---~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d~Idin~g 148 (240)
.. +. ..+.+. ..|. ++ . ..++++..++..+ ..|++.. ++. +..++.++++++ +|.|.++++
T Consensus 249 ~~~~~~la~~l~---~~Gvd~i~v~~~~~~~~~~~~ik~~~---~iPvi~~---Ggi-t~e~a~~~l~~G~aD~V~iGR~ 318 (361)
T 3gka_A 249 AATFGHVARELG---RRRIAFLFARESFGGDAIGQQLKAAF---GGPFIVN---ENF-TLDSAQAALDAGQADAVAWGKL 318 (361)
T ss_dssp HHHHHHHHHHHH---HTTCSEEEEECCCSTTCCHHHHHHHH---CSCEEEE---SSC-CHHHHHHHHHTTSCSEEEESHH
T ss_pred HHHHHHHHHHHH---HcCCCEEEECCCCCCHHHHHHHHHHc---CCCEEEe---CCC-CHHHHHHHHHcCCccEEEECHH
Confidence 00 00 001111 1122 22 1 1235556655544 3677655 445 666777888875 999999776
Q ss_pred CchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 149 CPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 149 CP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
++.||+++.++.+.
T Consensus 319 --------------~ladPdl~~k~~~g 332 (361)
T 3gka_A 319 --------------FIANPDLPRRFKLN 332 (361)
T ss_dssp --------------HHHCTTHHHHHHHT
T ss_pred --------------hHhCcHHHHHHHhC
Confidence 67899998888764
No 58
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=97.90 E-value=3.1e-06 Score=75.79 Aligned_cols=143 Identities=9% Similarity=-0.030 Sum_probs=78.6
Q ss_pred CCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeeccccccc--------------CCCcccc--
Q psy7344 14 HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAE--------------PHCDGID-- 77 (240)
Q Consensus 14 ~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~la--------------p~~~~~d-- 77 (240)
++|.|+||++||..+ .+..++.+++++.+++.++. +..+.|+++|..-.+. ...+.+-
T Consensus 155 ~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v~-~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i~~i 228 (354)
T 3tjx_A 155 KGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAVS-EVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp HCCEEEEECC--------------CTTSHHHHHHHHHHHH-HHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHHH-HHhhcccccccCCCCCchhHHHHHHHHHhhcccchhhee
Confidence 578999999999765 35678999999999999998 5778898887321110 0000000
Q ss_pred --------ccCchhhhhhhhc--ccceee-eCChhhHHHhhhcccC--CCCceeEEeecCCHHHHHHHHHHHccCCCEEE
Q psy7344 78 --------INIGCPQMVAKRG--HYGAYL-QDDWPLLTELGFKTRS--HMCGHSLMFCGNDSKNLTEAAKLAEPHCDGID 144 (240)
Q Consensus 78 --------l~~gC~~~i~~~g--~~ga~l-~~d~eli~~i~~~~~~--~~~pvivqi~g~d~~~~~~aa~~le~~~d~Id 144 (240)
+..+ ......+. ++|.+. ...+++..+++..+.. ...|+| +.+++.+..++.+++..|++.|+
T Consensus 229 ~t~~~~~~id~~-~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~pII---g~GGI~s~~Da~e~i~aGAs~Vq 304 (354)
T 3tjx_A 229 NSIGNGLVIDAE-TESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIF---GCGGVYTGEDAFLHVLAGASMVQ 304 (354)
T ss_dssp CCEEEEECEETT-TTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEE---EESSCCSHHHHHHHHHHTEEEEE
T ss_pred cccccccccccc-cccccccCcccccccCchhhHHHHHHHHHHHHHhcCCCcEE---EeCCcCCHHHHHHHHHcCCCEEE
Confidence 0000 00001111 122222 2334444444333321 134544 44888899999999988999999
Q ss_pred ecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 145 INIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 145 in~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
|..+- +...|+.+.+|++.+.+
T Consensus 305 v~Ta~-------------~y~GP~~~~~I~~~L~~ 326 (354)
T 3tjx_A 305 VGTAL-------------QEEGPSIFERLTSELLG 326 (354)
T ss_dssp ECHHH-------------HHHCTTHHHHHHHHHHH
T ss_pred EChhh-------------hhcCchHHHHHHHHHHH
Confidence 96551 12467788888776654
No 59
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.88 E-value=7.6e-05 Score=66.33 Aligned_cols=132 Identities=13% Similarity=-0.030 Sum_probs=84.1
Q ss_pred ecccccccCCCccccccCchhhhhhhhcccceeeeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC--C
Q psy7344 63 MGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH--C 140 (240)
Q Consensus 63 vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~--~ 140 (240)
++.+.+++||...++..+. ..++..++.+.+...+++...+.+...+....|+.+++ +.+++.+..+..+++.+ +
T Consensus 45 l~~Pi~~a~mag~s~~~la--~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~~v~v~~-g~~~~~~~~a~~~~~~g~~~ 121 (336)
T 1ypf_A 45 FKLPVVPANMQTIIDERIA--TYLAENNYFYIMHRFQPEKRISFIRDMQSRGLIASISV-GVKEDEYEFVQQLAAEHLTP 121 (336)
T ss_dssp ESSSEEECSSTTTCCHHHH--HHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCCCEEEE-CCSHHHHHHHHHHHHTTCCC
T ss_pred ecCcEEECCCCCCChHHHH--HHHHhCCCEEEecCCCCHHHHHHHHHHHhcCCeEEEeC-CCCHHHHHHHHHHHhcCCCC
Confidence 3445677899988876663 34555556555555555555544433333345888885 55666665554555667 8
Q ss_pred CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeE
Q psy7344 141 DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 141 d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~i 219 (240)
+.|++|.+. | ++....++++++++. ++.|+.+|..+. +.+.++.+++ |+|+|
T Consensus 122 ~~i~i~~~~----------G-----~~~~~~~~i~~lr~~-----------~~~~~vi~G~v~-s~e~A~~a~~aGad~I 174 (336)
T 1ypf_A 122 EYITIDIAH----------G-----HSNAVINMIQHIKKH-----------LPESFVIAGNVG-TPEAVRELENAGADAT 174 (336)
T ss_dssp SEEEEECSS----------C-----CSHHHHHHHHHHHHH-----------CTTSEEEEEEEC-SHHHHHHHHHHTCSEE
T ss_pred CEEEEECCC----------C-----CcHHHHHHHHHHHHh-----------CCCCEEEECCcC-CHHHHHHHHHcCCCEE
Confidence 999998751 1 555666777777776 433444454333 3578889999 99999
Q ss_pred EE--ecc
Q psy7344 220 TE--LGK 224 (240)
Q Consensus 220 ti--h~R 224 (240)
++ |++
T Consensus 175 vvs~hgG 181 (336)
T 1ypf_A 175 KVGIGPG 181 (336)
T ss_dssp EECSSCS
T ss_pred EEecCCC
Confidence 99 775
No 60
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=97.81 E-value=1.1e-05 Score=73.55 Aligned_cols=145 Identities=11% Similarity=0.015 Sum_probs=87.7
Q ss_pred cccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccC-CCceeecccc--cccCCCcccc
Q psy7344 10 ETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSK-NGPLFMGPLF--IAEPHCDGID 77 (240)
Q Consensus 10 ~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~-~~p~~vk~~~--~lap~~~~~d 77 (240)
..+.|+|.|+||+|| |..+-+...||..|++++.++.+++.++. +.. ..|+.+|... ....+.+..+
T Consensus 180 a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr-~avg~~~V~vRls~~~~~~g~~~~~~ 258 (402)
T 2hsa_B 180 AIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVV-SAIGADRVGVRVSPAIDHLDAMDSNP 258 (402)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHHCGGGEEEEECSSCCSTTCCCSCH
T ss_pred HHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHH-HHhCCCcEEEEeccccccCCCCCCCC
Confidence 456789999999997 98766666688789999999999999998 344 3488776321 1101111000
Q ss_pred c-----------cCch-----hhhhhhhccccee-e--e--------CChhhHHHhhhcccCCCCceeEEeecCCHHHHH
Q psy7344 78 I-----------NIGC-----PQMVAKRGHYGAY-L--Q--------DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLT 130 (240)
Q Consensus 78 l-----------~~gC-----~~~i~~~g~~ga~-l--~--------~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~ 130 (240)
+ ..|. ...+.+++++... . . .+++++..++..+ ..|+++. ++. +..
T Consensus 259 ~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~---~iPvi~~---G~i-~~~ 331 (402)
T 2hsa_B 259 LSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY---QGTFICS---GGY-TRE 331 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC---SSCEEEE---SSC-CHH
T ss_pred HHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHC---CCCEEEe---CCC-CHH
Confidence 0 1110 1122222221000 0 0 1133444444433 3677655 566 667
Q ss_pred HHHHHHccC-CCEEEecCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 131 EAAKLAEPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 131 ~aa~~le~~-~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
++.++++++ +|.|+++++ ++.||+++.++.+.
T Consensus 332 ~a~~~l~~g~aD~V~igR~--------------~l~dP~l~~k~~~g 364 (402)
T 2hsa_B 332 LGIEAVAQGDADLVSYGRL--------------FISNPDLVMRIKLN 364 (402)
T ss_dssp HHHHHHHTTSCSEEEESHH--------------HHHCTTHHHHHHHT
T ss_pred HHHHHHHCCCCceeeecHH--------------HHhCchHHHHHHhC
Confidence 788888885 999999776 67899999888753
No 61
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=97.79 E-value=6.1e-06 Score=72.90 Aligned_cols=53 Identities=15% Similarity=0.046 Sum_probs=38.9
Q ss_pred cccccCCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccc
Q psy7344 8 RIETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLF 67 (240)
Q Consensus 8 ~~~~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~ 67 (240)
|+.++.|++.|... ||+++..+...|+++|++|+.+.+|.. +.+.|++.|.+.
T Consensus 31 ~~ae~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~~-----av~iPV~~K~ri 83 (330)
T 2yzr_A 31 QIAEEAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIMD-----AVSIPVMAKCRI 83 (330)
T ss_dssp HHHHHHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHHH-----HCSSCEEEEEET
T ss_pred HHHHHcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHHH-----hcCCCeEEEEee
Confidence 44556678887222 299999999999999999999777643 457999988654
No 62
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=97.61 E-value=1.2e-05 Score=72.51 Aligned_cols=130 Identities=11% Similarity=0.082 Sum_probs=78.7
Q ss_pred cccCCCCeecccCCCchh-----------------hhhc-----cCCCccc---C--CCchhHHHHHHHhhcccCCCcee
Q psy7344 10 ETEPHCDGIDINIGCPQM-----------------VAKR-----GHYGAYL---Q--DDWPLLTELVVHFSWVSKNGPLF 62 (240)
Q Consensus 10 ~~~~~~d~id~N~gcP~~-----------------kv~k-----~~~G~~l---~--~~~~l~~~iv~ql~~~~~~~p~~ 62 (240)
..+.+++.|+||++||+. +..+ ...|+.+ + .++++..+.+.++. +..+.|++
T Consensus 155 a~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr-~~~~~Pvi 233 (368)
T 2nli_A 155 AKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIA-GHSGLPVF 233 (368)
T ss_dssp HHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHH-HHSSSCEE
T ss_pred HHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHH-HHcCCCEE
Confidence 345689999999999982 2221 2345554 4 37888888899998 45688998
Q ss_pred ecccccccCCCccccccCchhhhhhhhcccceee---eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC
Q psy7344 63 MGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYL---QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH 139 (240)
Q Consensus 63 vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l---~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~ 139 (240)
+|-. ..+.....-...| ...|.++++.|..+ ..+++.+.+++..+. .+.|++.. +++.+..++++++..|
T Consensus 234 vK~v--~~~e~a~~a~~~G-ad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~-~~ipVia~---GGI~~g~D~~kalalG 306 (368)
T 2nli_A 234 VKGI--QHPEDADMAIKRG-ASGIWVSNHGARQLYEAPGSFDTLPAIAERVN-KRVPIVFD---SGVRRGEHVAKALASG 306 (368)
T ss_dssp EEEE--CSHHHHHHHHHTT-CSEEEECCGGGTSCSSCCCHHHHHHHHHHHHT-TSSCEEEC---SSCCSHHHHHHHHHTT
T ss_pred EEcC--CCHHHHHHHHHcC-CCEEEEcCCCcCCCCCCCChHHHHHHHHHHhC-CCCeEEEE---CCCCCHHHHHHHHHcC
Confidence 8721 1110000001344 33444422222111 334677777766553 24677655 8888888999999999
Q ss_pred CCEEEecC
Q psy7344 140 CDGIDINI 147 (240)
Q Consensus 140 ~d~Idin~ 147 (240)
+|+|+|++
T Consensus 307 Ad~V~iGr 314 (368)
T 2nli_A 307 ADVVALGR 314 (368)
T ss_dssp CSEEEECH
T ss_pred CCEEEECH
Confidence 99999986
No 63
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=97.60 E-value=1.2e-05 Score=73.76 Aligned_cols=149 Identities=12% Similarity=-0.013 Sum_probs=90.3
Q ss_pred cccCCCCeecccCCC---------chhhhhccCCCccc-CCCchhHHHHHHHhhcccC------CCceeeccc--ccccC
Q psy7344 10 ETEPHCDGIDINIGC---------PQMVAKRGHYGAYL-QDDWPLLTELVVHFSWVSK------NGPLFMGPL--FIAEP 71 (240)
Q Consensus 10 ~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l-~~~~~l~~~iv~ql~~~~~------~~p~~vk~~--~~lap 71 (240)
..+-|+|.|+||+|| |.-..+...||..+ .+...++.+++.++. +.. +-|+.++.. ....+
T Consensus 179 A~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr-~~v~~~~~~~f~v~vRis~~~~~~~ 257 (419)
T 3l5a_A 179 AIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQ-EVIDKEAPDNFILGFRATPEETRGS 257 (419)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHH-HHHHHHCCTTCEEEEEECSCEEETT
T ss_pred HHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHH-HHHhhhcCCCeeEEEecccccccCC
Confidence 446789999999999 97666555677777 888999999999888 343 346666521 11111
Q ss_pred ---C--Cccccc-----c-Cchhhhhhhhcccce---e----e-e-CChhhHHHhhhcccCCCCceeEEeecCCHHHHHH
Q psy7344 72 ---H--CDGIDI-----N-IGCPQMVAKRGHYGA---Y----L-Q-DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTE 131 (240)
Q Consensus 72 ---~--~~~~dl-----~-~gC~~~i~~~g~~ga---~----l-~-~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~ 131 (240)
+ .+..++ . .| ...+.++++... + . . .+++++..++..+. ...||++. +++.+..+
T Consensus 258 ~~G~~~ed~~~la~~L~~~~G-vd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~-~~iPVI~~---GgI~t~e~ 332 (419)
T 3l5a_A 258 DLGYTIDEFNQLIDWVMDVSN-IQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLA-GRIPLIAS---GGINSPES 332 (419)
T ss_dssp EEEECHHHHHHHHHHHHHHSC-CCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHT-TSSCEEEC---SSCCSHHH
T ss_pred CCCCCHHHHHHHHHHHHhhcC-CcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcC-CCCeEEEE---CCCCCHHH
Confidence 0 011111 2 33 233333433210 0 0 0 13456666554432 13676654 55556667
Q ss_pred HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 132 AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 132 aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
+.+++++ +|.|.++++ ++.||+++.++.+...+
T Consensus 333 Ae~~L~~-aDlVaiGR~--------------~IanPdlv~ki~~G~~~ 365 (419)
T 3l5a_A 333 ALDALQH-ADMVGMSSP--------------FVTEPDFVHKLAEQRPH 365 (419)
T ss_dssp HHHHGGG-CSEEEESTH--------------HHHCTTHHHHHHTTCGG
T ss_pred HHHHHHh-CCcHHHHHH--------------HHHCcHHHHHHHcCCcc
Confidence 7778878 999999777 67899999888875443
No 64
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=97.59 E-value=0.00019 Score=63.54 Aligned_cols=122 Identities=11% Similarity=-0.051 Sum_probs=74.2
Q ss_pred cccccCCCccccccCchhhhhhhhcccceeee--CChhhHHHhhhcccC-CCCceeEEeecCCHHHHHHHHHHH-ccCCC
Q psy7344 66 LFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQ--DDWPLLTELGFKTRS-HMCGHSLMFCGNDSKNLTEAAKLA-EPHCD 141 (240)
Q Consensus 66 ~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l~--~d~eli~~i~~~~~~-~~~pvivqi~g~d~~~~~~aa~~l-e~~~d 141 (240)
+.+.+||.+.++..+. ..+...|..|.... .+++.+.+....++. .+.|+.+++...++. +.+.++.+ +.++|
T Consensus 14 Pii~apM~g~s~~~la--~av~~aG~lG~i~~~~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~~-~~~~~~~a~~~g~d 90 (332)
T 2z6i_A 14 PIFQGGMAWVADGDLA--GAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPF-VEDIVDLVIEEGVK 90 (332)
T ss_dssp SEEECCCTTTCCHHHH--HHHHHHTSBEEEECTTCCHHHHHHHHHHHHHHCCSCEEEEECTTSTT-HHHHHHHHHHTTCS
T ss_pred CEEeCCCCCCCcHHHH--HHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEecCCCCC-HHHHHHHHHHCCCC
Confidence 3466899876655553 44555554344321 234444433322221 246899999875544 44555554 55899
Q ss_pred EEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEE
Q psy7344 142 GIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 142 ~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~it 220 (240)
+|.++.|||.. +++.+++ ..+|+.+|+. +.+.++.+++ |+|+|.
T Consensus 91 ~V~~~~g~p~~--------------------~i~~l~~------------~g~~v~~~v~---~~~~a~~~~~~GaD~i~ 135 (332)
T 2z6i_A 91 VVTTGAGNPSK--------------------YMERFHE------------AGIIVIPVVP---SVALAKRMEKIGADAVI 135 (332)
T ss_dssp EEEECSSCGGG--------------------THHHHHH------------TTCEEEEEES---SHHHHHHHHHTTCSCEE
T ss_pred EEEECCCChHH--------------------HHHHHHH------------cCCeEEEEeC---CHHHHHHHHHcCCCEEE
Confidence 99999998732 2333333 2468888763 3456778888 999999
Q ss_pred Eeccc
Q psy7344 221 ELGKM 225 (240)
Q Consensus 221 ih~R~ 225 (240)
++++.
T Consensus 136 v~g~~ 140 (332)
T 2z6i_A 136 AEGME 140 (332)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 99873
No 65
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.57 E-value=0.00024 Score=62.13 Aligned_cols=101 Identities=7% Similarity=-0.065 Sum_probs=73.8
Q ss_pred CCceeEEe---ecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCC
Q psy7344 114 MCGHSLMF---CGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHC 189 (240)
Q Consensus 114 ~~pvivqi---~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~ 189 (240)
+.|+++.+ .|.+++...+.++.+++ |+++|.|.-++..++..|. .|..|....+.+.+|..++...
T Consensus 78 ~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~-~gk~L~p~~~~~~~I~Aa~~a~--------- 147 (295)
T 1xg4_A 78 SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHR-PNKAIVSKEEMVDRIRAAVDAK--------- 147 (295)
T ss_dssp CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTS-SSCCBCCHHHHHHHHHHHHHHC---------
T ss_pred CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCC-CCCccCCHHHHHHHHHHHHHhc---------
Confidence 46999998 34488888888887765 8999999999854543333 2455777777777777666655
Q ss_pred CCCCeeeEEeeeh--------hcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 190 DGNDINIGCPQMV--------AKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 190 ~~~~~pvsvK~r~--------~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
...++.++-|. +..++-++++++ |||.|.+|+++.
T Consensus 148 --~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~~~ 191 (295)
T 1xg4_A 148 --TDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAITE 191 (295)
T ss_dssp --SSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTCCS
T ss_pred --cCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 23456666662 467788888999 999999999874
No 66
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=97.56 E-value=0.00015 Score=65.29 Aligned_cols=97 Identities=4% Similarity=-0.158 Sum_probs=60.1
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
+.|++.+|...... .++.+.++. ++|++.++.-..+......|- .++....+.++++++. +
T Consensus 144 ~~~~ianig~~~~~--e~~~~~ve~~~adal~ihln~~qe~~~p~Gd-----~~~~~~~~~I~~l~~~-----------~ 205 (365)
T 3sr7_A 144 HLLLATNIGLDKPY--QAGLQAVRDLQPLFLQVHINLMQELLMPEGE-----REFRSWKKHLSDYAKK-----------L 205 (365)
T ss_dssp -CCEEEEEETTSCH--HHHHHHHHHHCCSCEEEEECHHHHHTSSSSC-----CCCHHHHHHHHHHHHH-----------C
T ss_pred CCcEEEEeCCCCCH--HHHHHHHHhcCCCEEEEeccccccccCCCCC-----CcHHHHHHHHHHHHHh-----------h
Confidence 46788888654322 244455543 677777766643433332221 3443444667777776 7
Q ss_pred CeeeEEeee-hhcHHHHHHHHhC-CCCeEEEecccccc
Q psy7344 193 DINIGCPQM-VAKRGHYGAYLQD-DWPLLTELGKMAML 228 (240)
Q Consensus 193 ~~pvsvK~r-~~~~~~~~~~l~~-G~~~itih~R~~~~ 228 (240)
++||.+|.- +..+.+.++.+++ |+|+|+++++...+
T Consensus 206 ~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~ 243 (365)
T 3sr7_A 206 QLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTS 243 (365)
T ss_dssp CSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC---
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcc
Confidence 889999953 3456678999999 99999998875543
No 67
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=97.53 E-value=0.00015 Score=65.42 Aligned_cols=144 Identities=10% Similarity=-0.004 Sum_probs=81.4
Q ss_pred ecccccccCCCccccccC----chhhhhhhhc---cccee--eeCChhhHHHh--hhcccCCCCceeEEeec------CC
Q psy7344 63 MGPLFIAEPHCDGIDINI----GCPQMVAKRG---HYGAY--LQDDWPLLTEL--GFKTRSHMCGHSLMFCG------ND 125 (240)
Q Consensus 63 vk~~~~lap~~~~~dl~~----gC~~~i~~~g---~~ga~--l~~d~eli~~i--~~~~~~~~~pvivqi~g------~d 125 (240)
++.+.+++||.+.++.++ .-.+.....| ..|+. ...++++.... +.+..+ +.|++.++.. .+
T Consensus 58 l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap-~~~~~anlg~~ql~~~~~ 136 (368)
T 3vkj_A 58 ISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAP-TIPIIANLGMPQLVKGYG 136 (368)
T ss_dssp ESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHHHCS-SSCEEEEEEGGGGGTTCC
T ss_pred ccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHHhCc-CcceecCcCeeecCCCCC
Confidence 345678899988876542 1012222221 11121 11144443322 222222 4677777654 56
Q ss_pred HHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHH-HHHHHHHHhhhccccccCCCCCCCCeeeEEeee-hh
Q psy7344 126 SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP-LLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-VA 203 (240)
Q Consensus 126 ~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~-~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-~~ 203 (240)
++...+++++++.++..|++| |...+... .|. .|+. ...+.++++++. +++||.+|.- ..
T Consensus 137 ~~~~~~av~~~~a~al~Ihln---~~~~~~~p-~g~---~~~~~~~~~~i~~i~~~-----------~~vPVivK~vG~g 198 (368)
T 3vkj_A 137 LKEFQDAIQMIEADAIAVHLN---PAQEVFQP-EGE---PEYQIYALEKLRDISKE-----------LSVPIIVKESGNG 198 (368)
T ss_dssp HHHHHHHHHHTTCSEEEEECC---HHHHHHSS-SCC---CBCBTHHHHHHHHHHTT-----------CSSCEEEECSSSC
T ss_pred HHHHHHHHHHhcCCCeEEEec---chhhhhCC-CCC---chhhHHHHHHHHHHHHH-----------cCCCEEEEeCCCC
Confidence 788888888886666667777 33332211 111 2222 244566777766 7889999963 22
Q ss_pred cHHHHHHHHhC-CCCeEEE--eccc
Q psy7344 204 KRGHYGAYLQD-DWPLLTE--LGKM 225 (240)
Q Consensus 204 ~~~~~~~~l~~-G~~~iti--h~R~ 225 (240)
.+.+.++.+++ |+|+|+| ||.|
T Consensus 199 ~s~~~A~~l~~aGad~I~V~g~GGt 223 (368)
T 3vkj_A 199 ISMETAKLLYSYGIKNFDTSGQGGT 223 (368)
T ss_dssp CCHHHHHHHHHTTCCEEECCCBTSB
T ss_pred CCHHHHHHHHhCCCCEEEEeCCCCC
Confidence 34677899999 9999999 5554
No 68
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=97.52 E-value=0.00014 Score=64.97 Aligned_cols=134 Identities=13% Similarity=0.126 Sum_probs=85.6
Q ss_pred CCcccccc---------CchhhhhhhhcccceeeeCChhhHHHhhhcccC---CCCceeEEeecC-------CHHHHHHH
Q psy7344 72 HCDGIDIN---------IGCPQMVAKRGHYGAYLQDDWPLLTELGFKTRS---HMCGHSLMFCGN-------DSKNLTEA 132 (240)
Q Consensus 72 ~~~~~dl~---------~gC~~~i~~~g~~ga~l~~d~eli~~i~~~~~~---~~~pvivqi~g~-------d~~~~~~a 132 (240)
.+|++|++ |.||..=.+.-.||..+.....++.+++.+++. .+.|+.+.|... +.+++.++
T Consensus 156 GfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~ 235 (343)
T 3kru_A 156 GYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEY 235 (343)
T ss_dssp TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHH
T ss_pred CCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHH
Confidence 46788887 667654323345666554445566665554443 256899998643 47788899
Q ss_pred HHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHH
Q psy7344 133 AKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYL 212 (240)
Q Consensus 133 a~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l 212 (240)
++.+++.+|.|++..|..... ....+. ..+++.++++.+. +++||.+-.++.+..+..+.+
T Consensus 236 a~~l~~~vd~i~vs~g~~~~~--~~~~~~--~~~~~~~~~ir~~---------------~~iPVi~~Ggi~t~e~Ae~~l 296 (343)
T 3kru_A 236 INMIKDKVDLIDVSSGGLLNV--DINLYP--GYQVKYAETIKKR---------------CNIKTSAVGLITTQELAEEIL 296 (343)
T ss_dssp HHHHTTTCSEEEEECCCSSCC--CCCCCT--TTTHHHHHHHHHH---------------HTCEEEEESSCCCHHHHHHHH
T ss_pred HHHhhccccEEeccCCceEee--eecccC--ceeehHHHHHHHh---------------cCcccceeeeeeHHHHHHHHH
Confidence 999976699999954422110 000011 1356655555543 456888888887777888888
Q ss_pred hC-CCCeEEEeccc
Q psy7344 213 QD-DWPLLTELGKM 225 (240)
Q Consensus 213 ~~-G~~~itih~R~ 225 (240)
++ ++|.|.+ ||-
T Consensus 297 ~~G~aD~V~i-GR~ 309 (343)
T 3kru_A 297 SNERADLVAL-GRE 309 (343)
T ss_dssp HTTSCSEEEE-SHH
T ss_pred hchhhHHHHH-HHH
Confidence 88 7999999 885
No 69
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=97.51 E-value=0.00024 Score=62.80 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=58.6
Q ss_pred HHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHH
Q psy7344 130 TEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHY 208 (240)
Q Consensus 130 ~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~ 208 (240)
.+.|+..++ |+++|+... |.+...+...|+++|.+|+.+.+|.++ +++||..|.|+.. .+-
T Consensus 27 ~e~A~~ae~aGA~aI~~l~--~v~~d~~~~~G~arm~~p~~i~~I~~a---------------v~iPV~~K~rig~-~~e 88 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALE--RVPADIRAAGGVARMSDPALIEEIMDA---------------VSIPVMAKCRIGH-TTE 88 (330)
T ss_dssp HHHHHHHHHHTCSEEEECS--SCHHHHC--CCCCCCCCHHHHHHHHHH---------------CSSCEEEEEETTC-HHH
T ss_pred HHHHHHHHHcCCCEEEecC--CccccccCCcchhhcCCHHHHHHHHHh---------------cCCCeEEEEeecc-hHH
Confidence 457777766 899997644 787778888899999999999999864 6889999999754 355
Q ss_pred HHHHhC-CCCeEEE
Q psy7344 209 GAYLQD-DWPLLTE 221 (240)
Q Consensus 209 ~~~l~~-G~~~iti 221 (240)
++.++. |+|.|-.
T Consensus 89 ~qilea~GaD~Id~ 102 (330)
T 2yzr_A 89 ALVLEAIGVDMIDE 102 (330)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEeh
Confidence 888999 9999865
No 70
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.51 E-value=1.7e-05 Score=76.81 Aligned_cols=142 Identities=13% Similarity=-0.032 Sum_probs=82.1
Q ss_pred cccCCCCeecccCCCch-----------hhhhccCCCcccCCCchhHHHHHHHhhcccC--CCceeecccccccCC-Ccc
Q psy7344 10 ETEPHCDGIDINIGCPQ-----------MVAKRGHYGAYLQDDWPLLTELVVHFSWVSK--NGPLFMGPLFIAEPH-CDG 75 (240)
Q Consensus 10 ~~~~~~d~id~N~gcP~-----------~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~--~~p~~vk~~~~lap~-~~~ 75 (240)
..+.|+|.|+|+++|+. ++-+. .||..+.+...++.+++.++. +.. +.|+.++.. ...+ .+.
T Consensus 165 a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D-~yGGs~enR~r~~~ei~~avr-~~~g~~~~v~~r~s--~~~~~~~g 240 (690)
T 3k30_A 165 SIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTD-EYGGSLENRMRLLRELLEDTL-DECAGRAAVACRIT--VEEEIDGG 240 (690)
T ss_dssp HHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCS-TTSSSHHHHTHHHHHHHHHHH-HHHTTSSEEEEEEE--CCCCSTTS
T ss_pred HHHcCCCEEEEcccccchHHHHhCCCccCCCcc-ccCCCHHHHHHHHHHHHHHHH-HHhCCCceEEEEEC--ccccCCCC
Confidence 34568999999999887 44443 477779999999999999988 354 336655421 0000 011
Q ss_pred ccc----------cCchhhhhhhhcccc------e-ee--eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHH
Q psy7344 76 IDI----------NIGCPQMVAKRGHYG------A-YL--QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLA 136 (240)
Q Consensus 76 ~dl----------~~gC~~~i~~~g~~g------a-~l--~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~l 136 (240)
.+. .-+ ...+.+++++- . +. ..+++++..++..+ ..|++.. ++..+..++.+++
T Consensus 241 ~~~~~~~~~~~~l~~~-~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pvi~~---G~i~~~~~a~~~l 313 (690)
T 3k30_A 241 ITREDIEGVLRELGEL-PDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT---TKPVVGV---GRFTSPDAMVRQI 313 (690)
T ss_dssp CCHHHHHHHHHHHTTS-SSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC---SSCEEEC---SCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh-cCEEEEecccccccCCCCccCCccccHHHHHHHHHHc---CCeEEEe---CCCCCHHHHHHHH
Confidence 111 001 11222222110 0 00 01134444444433 4677654 6666667778888
Q ss_pred ccC-CCEEEecCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 137 EPH-CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 137 e~~-~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
+++ +|.|+++++ ++.||+++.++.+.
T Consensus 314 ~~g~~d~v~~gR~--------------~~~~P~~~~~~~~g 340 (690)
T 3k30_A 314 KAGILDLIGAARP--------------SIADPFLPNKIRDG 340 (690)
T ss_dssp HTTSCSEEEESHH--------------HHHCTTHHHHHHTT
T ss_pred HCCCcceEEEcHH--------------hHhCccHHHHHHcC
Confidence 885 999999877 45777777777654
No 71
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=97.51 E-value=4.6e-05 Score=64.01 Aligned_cols=79 Identities=5% Similarity=-0.029 Sum_probs=55.8
Q ss_pred HHHHHHccCCCEEE--ecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEee---e--h-
Q psy7344 131 EAAKLAEPHCDGID--INIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQ---M--V- 202 (240)
Q Consensus 131 ~aa~~le~~~d~Id--in~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~---r--~- 202 (240)
++.+.++.|+|+|| +|+|| .+. .+++.+.+.++++++. .. |+++|+ + +
T Consensus 75 ~~~~A~~~Gad~Id~viN~g~-----~~~-------~~~~~~~~~i~~v~~a-----------~~-pv~vKvi~e~~~l~ 130 (225)
T 1mzh_A 75 EAVEAVRDGAQELDIVWNLSA-----FKS-------EKYDFVVEELKEIFRE-----------TP-SAVHKVIVETPYLN 130 (225)
T ss_dssp HHHHHHHTTCSEEEEECCHHH-----HHT-------TCHHHHHHHHHHHHHT-----------CT-TSEEEEECCGGGCC
T ss_pred HHHHHHHcCCCEEEEEecHHH-----Hhc-------CChHHHHHHHHHHHHH-----------hc-CceEEEEEeCCCCC
Confidence 34445567999999 89998 111 3677888888988887 45 899999 4 2
Q ss_pred -hcHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCCC
Q psy7344 203 -AKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSWT 239 (240)
Q Consensus 203 -~~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw~ 239 (240)
++..++++.+++ |+|+| +-+| .. +.+-++|+
T Consensus 131 ~~~~~~~a~~a~eaGad~I--~tst--g~--~~gga~~~ 163 (225)
T 1mzh_A 131 EEEIKKAVEICIEAGADFI--KTST--GF--APRGTTLE 163 (225)
T ss_dssp HHHHHHHHHHHHHHTCSEE--ECCC--SC--SSSCCCHH
T ss_pred HHHHHHHHHHHHHhCCCEE--EECC--CC--CCCCCCHH
Confidence 246788999999 99999 3444 33 23555653
No 72
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=97.43 E-value=2.3e-05 Score=70.96 Aligned_cols=141 Identities=9% Similarity=-0.048 Sum_probs=82.7
Q ss_pred cCCCCeecccCCC---------chhhhh-ccCCCc-ccCCCchhHHHHHHHhhcccC-CCceeecccc--cccCCCcccc
Q psy7344 12 EPHCDGIDINIGC---------PQMVAK-RGHYGA-YLQDDWPLLTELVVHFSWVSK-NGPLFMGPLF--IAEPHCDGID 77 (240)
Q Consensus 12 ~~~~d~id~N~gc---------P~~kv~-k~~~G~-~l~~~~~l~~~iv~ql~~~~~-~~p~~vk~~~--~lap~~~~~d 77 (240)
+.|+|.|+||+|| |.-.-+ ...||. .|.++..++.+++.++. +.. ..|+.++..- ....+.+..+
T Consensus 186 ~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr-~avg~~~v~vRis~~~~~~~~~~~~~ 264 (379)
T 3aty_A 186 KAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVC-DAVGSDRVGLRISPLNGVHGMIDSNP 264 (379)
T ss_dssp TSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHH-HHHCGGGEEEEECTTCCGGGCCCSCH
T ss_pred hcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHH-HhcCCCeEEEEECcccccccCCCCCC
Confidence 6789999999997 665444 456777 89999999999999998 343 3477665211 1001111111
Q ss_pred c-----------cCchhhhhhhhcccceeeeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-CCEEEe
Q psy7344 78 I-----------NIGCPQMVAKRGHYGAYLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-CDGIDI 145 (240)
Q Consensus 78 l-----------~~gC~~~i~~~g~~ga~l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~d~Idi 145 (240)
. ..| ...+.+++++-..-....+ +..++..+ ..|++.. ++. +..++.++++++ +|.|++
T Consensus 265 ~~~~~~la~~l~~~G-vd~i~v~~~~~~~~~~~~~-~~~ir~~~---~iPvi~~---G~i-t~~~a~~~l~~g~aD~V~i 335 (379)
T 3aty_A 265 EALTKHLCKKIEPLS-LAYLHYLRGDMVNQQIGDV-VAWVRGSY---SGVKISN---LRY-DFEEADQQIREGKVDAVAF 335 (379)
T ss_dssp HHHHHHHHHHHGGGC-CSEEEEECSCTTSCCCCCH-HHHHHTTC---CSCEEEE---SSC-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHHhC-CCEEEEcCCCcCCCCccHH-HHHHHHHC---CCcEEEE---CCC-CHHHHHHHHHcCCCeEEEe
Confidence 1 112 1122222211000000123 44444433 3676654 555 566778888875 999999
Q ss_pred cCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 146 NIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 146 n~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
+++ ++.||+++.++.+.
T Consensus 336 gR~--------------~l~~P~l~~k~~~g 352 (379)
T 3aty_A 336 GAK--------------FIANPDLVERAQQN 352 (379)
T ss_dssp SHH--------------HHHCTTHHHHHHHT
T ss_pred cHH--------------HHhCcHHHHHHHcC
Confidence 776 67899998888753
No 73
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=97.42 E-value=1.5e-05 Score=72.53 Aligned_cols=130 Identities=10% Similarity=0.003 Sum_probs=77.5
Q ss_pred ccCCCCeecccCCCchh---------------hh-hcc--------------CCCc---ccCC---CchhHHHHHHHhhc
Q psy7344 11 TEPHCDGIDINIGCPQM---------------VA-KRG--------------HYGA---YLQD---DWPLLTELVVHFSW 54 (240)
Q Consensus 11 ~~~~~d~id~N~gcP~~---------------kv-~k~--------------~~G~---~l~~---~~~l~~~iv~ql~~ 54 (240)
...+++.++||++||+. ++ .++ ..|+ .++. ||++..+.+.++.
T Consensus 170 ~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr- 248 (392)
T 2nzl_A 170 EKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLR- 248 (392)
T ss_dssp HHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC-
T ss_pred HHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHH-
Confidence 45689999999999995 33 010 1222 3444 8887788899998
Q ss_pred ccCCCceeecccccccCCCccccccCchhhhhhhhcccceee---eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHH
Q psy7344 55 VSKNGPLFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYL---QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTE 131 (240)
Q Consensus 55 ~~~~~p~~vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l---~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~ 131 (240)
+..+.|+.+|-. ..+.....-...| +..|.++++.|..+ ...++.+.++...+.. +.||++. +++.+..+
T Consensus 249 ~~~~~PvivKgv--~~~e~A~~a~~aG-ad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~-~ipVia~---GGI~~g~D 321 (392)
T 2nzl_A 249 RLTSLPIVAKGI--LRGDDAREAVKHG-LNGILVSNHGARQLDGVPATIDVLPEIVEAVEG-KVEVFLD---GGVRKGTD 321 (392)
T ss_dssp --CCSCEEEEEE--CCHHHHHHHHHTT-CCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTT-SSEEEEC---SSCCSHHH
T ss_pred HhhCCCEEEEec--CCHHHHHHHHHcC-CCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCC-CCEEEEE---CCCCCHHH
Confidence 466789988721 1110000001344 34444433222211 2335677777655432 3676654 78888888
Q ss_pred HHHHHccCCCEEEecCC
Q psy7344 132 AAKLAEPHCDGIDINIG 148 (240)
Q Consensus 132 aa~~le~~~d~Idin~g 148 (240)
+++.+..|+|+|++++.
T Consensus 322 v~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 322 VLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHHHHHTTCSEEEECHH
T ss_pred HHHHHHhCCCeeEECHH
Confidence 99999899999999874
No 74
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=97.38 E-value=4.5e-05 Score=68.55 Aligned_cols=146 Identities=10% Similarity=-0.021 Sum_probs=90.0
Q ss_pred ccCCCCeecccCC---------CchhhhhccCCCcccCCCchhHHHHHHHhhcccC--CCceeecccc--cccCC----C
Q psy7344 11 TEPHCDGIDINIG---------CPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSK--NGPLFMGPLF--IAEPH----C 73 (240)
Q Consensus 11 ~~~~~d~id~N~g---------cP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~--~~p~~vk~~~--~lap~----~ 73 (240)
.+.|+|.|+||++ ||..+.+...||..|.+...++.+++.++. +.. +.|+.++..- +.... .
T Consensus 168 ~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr-~avg~d~pV~vRis~~~~~~~G~~~~~ 246 (363)
T 3l5l_A 168 RDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVR-EVWPENLPLTARFGVLEYDGRDEQTLE 246 (363)
T ss_dssp HHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-TTSCTTSCEEEEEEEECSSSCHHHHHH
T ss_pred HHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHH-HHcCCCceEEEEecchhcCCCCCCCHH
Confidence 4568999999998 598777667788889999999999999998 354 3577775321 10000 0
Q ss_pred ccccc-----cCchhhhhhhhcc-cce-e---e--eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccC-C
Q psy7344 74 DGIDI-----NIGCPQMVAKRGH-YGA-Y---L--QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPH-C 140 (240)
Q Consensus 74 ~~~dl-----~~gC~~~i~~~g~-~ga-~---l--~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~-~ 140 (240)
+.+.+ ..| ...+.++++ +.. . . ..+++++..++..+ ..|++.. +...+..++.++++++ +
T Consensus 247 ~~~~la~~L~~~G-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~---~iPVi~~---GgI~s~e~a~~~l~~G~a 319 (363)
T 3l5l_A 247 ESIELARRFKAGG-LDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA---KLPVTSA---WGFGTPQLAEAALQANQL 319 (363)
T ss_dssp HHHHHHHHHHHTT-CCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH---TCCEEEC---SSTTSHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHcC-CCEEEEecCccccccccCCCcchhHHHHHHHHHHc---CCcEEEe---CCCCCHHHHHHHHHCCCc
Confidence 00000 122 122222221 000 0 0 01345555555443 3676643 6666666777888886 9
Q ss_pred CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 141 DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 141 d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
|.|.++++ ++.||+++.++.+.+.
T Consensus 320 D~V~iGR~--------------~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 320 DLVSVGRA--------------HLADPHWAYFAAKELG 343 (363)
T ss_dssp SEEECCHH--------------HHHCTTHHHHHHHHTT
T ss_pred cEEEecHH--------------HHhCchHHHHHHHHcC
Confidence 99988666 6789999999988754
No 75
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.32 E-value=0.00037 Score=58.40 Aligned_cols=109 Identities=10% Similarity=-0.045 Sum_probs=71.3
Q ss_pred hhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 101 PLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 101 eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
+.++++...+ ..|+++..+-.++++ +.+.++.|+|+|.++.. ++.+|+.+.++++.+...
T Consensus 64 ~~i~~i~~~~---~ipv~v~ggi~~~~~---~~~~l~~Gad~V~lg~~--------------~l~~p~~~~~~~~~~g~~ 123 (244)
T 2y88_A 64 ELLAEVVGKL---DVQVELSGGIRDDES---LAAALATGCARVNVGTA--------------ALENPQWCARVIGEHGDQ 123 (244)
T ss_dssp HHHHHHHHHC---SSEEEEESSCCSHHH---HHHHHHTTCSEEEECHH--------------HHHCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHhc---CCcEEEECCCCCHHH---HHHHHHcCCCEEEECch--------------HhhChHHHHHHHHHcCCC
Confidence 5666665433 468777644455554 44455568898877544 467899999998876543
Q ss_pred cccccCCCCCCCCee-----eEEeee-hh----cHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCCC
Q psy7344 181 HFVIAEPHCDGNDIN-----IGCPQM-VA----KRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSWT 239 (240)
Q Consensus 181 ~~~i~~~~~~~~~~p-----vsvK~r-~~----~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw~ 239 (240)
+ ++ +.+.+ .++|+| +. ++.++++.+++ |++.|.+|+|++.+.+ .+. ||+
T Consensus 124 ~-~~------~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~--~g~-~~~ 183 (244)
T 2y88_A 124 V-AV------GLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTL--GGP-NLD 183 (244)
T ss_dssp E-EE------EEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTT--SCC-CHH
T ss_pred E-EE------EEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCCCCEEEEEecCCcccc--CCC-CHH
Confidence 1 00 02222 356666 22 57899999999 9999999999998763 343 653
No 76
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=97.23 E-value=0.0017 Score=57.28 Aligned_cols=123 Identities=9% Similarity=-0.036 Sum_probs=75.1
Q ss_pred cccccCCCccccccCchhhhhhhhcccceeee--CChhhHHHhhhcccC-CCCceeEEeecCCHHHHHHHHHHH-ccCCC
Q psy7344 66 LFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQ--DDWPLLTELGFKTRS-HMCGHSLMFCGNDSKNLTEAAKLA-EPHCD 141 (240)
Q Consensus 66 ~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l~--~d~eli~~i~~~~~~-~~~pvivqi~g~d~~~~~~aa~~l-e~~~d 141 (240)
+.+.+||.+.++..+. ..++..|+.|.... .+++.+.+....++. .+.|+.+++...++. +.+.++.+ +.++|
T Consensus 28 Pii~apM~gvs~~~la--~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~-~~~~~~~~~~~g~d 104 (326)
T 3bo9_A 28 PILMGGMAWAGTPTLA--AAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDKPFGVNIILVSPW-ADDLVKVCIEEKVP 104 (326)
T ss_dssp SEEECCCTTTSCHHHH--HHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSSCEEEEEETTSTT-HHHHHHHHHHTTCS
T ss_pred CEEECCCCCCCCHHHH--HHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCCCEEEEEeccCCC-HHHHHHHHHHCCCC
Confidence 3567899977766663 45555565454322 245555444433333 246899998775543 23444444 56899
Q ss_pred EEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEE
Q psy7344 142 GIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 142 ~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~it 220 (240)
.|.++.|||.. . ++.+++ ..+++.+++. +.+.++.+++ |+|+|.
T Consensus 105 ~V~l~~g~p~~----------------~----~~~l~~------------~g~~v~~~v~---s~~~a~~a~~~GaD~i~ 149 (326)
T 3bo9_A 105 VVTFGAGNPTK----------------Y----IRELKE------------NGTKVIPVVA---SDSLARMVERAGADAVI 149 (326)
T ss_dssp EEEEESSCCHH----------------H----HHHHHH------------TTCEEEEEES---SHHHHHHHHHTTCSCEE
T ss_pred EEEECCCCcHH----------------H----HHHHHH------------cCCcEEEEcC---CHHHHHHHHHcCCCEEE
Confidence 99999997632 1 222333 2457777653 3456677778 999999
Q ss_pred Eecccc
Q psy7344 221 ELGKMA 226 (240)
Q Consensus 221 ih~R~~ 226 (240)
++++..
T Consensus 150 v~g~~~ 155 (326)
T 3bo9_A 150 AEGMES 155 (326)
T ss_dssp EECTTS
T ss_pred EECCCC
Confidence 999753
No 77
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=97.23 E-value=0.00062 Score=58.74 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=57.7
Q ss_pred HHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHH
Q psy7344 131 EAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYG 209 (240)
Q Consensus 131 ~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~ 209 (240)
+.|+..|+ |+.+||...+||...-..+ |.+-|.+|+.|++|.++ +++||..|.|+.. ..-+
T Consensus 22 eqa~iae~aGa~av~~l~~~p~d~r~~g--Gv~Rm~dp~~I~~I~~a---------------VsIPVm~k~righ-~~EA 83 (291)
T 3o07_A 22 EQAKIAEKSGACAVMALESIPADMRKSG--KVCRMSDPKMIKDIMNS---------------VSIPVMAKVRIGH-FVEA 83 (291)
T ss_dssp HHHHHHHHHTCSEEEECSSCHHHHHTTT--CCCCCCCHHHHHHHHTT---------------CSSCEEEEEETTC-HHHH
T ss_pred HHHHHHHHhCchhhhhccCCCchhhhcC--CccccCCHHHHHHHHHh---------------CCCCeEEEEecCc-HHHH
Confidence 45666666 8999999999999764433 55568999998888754 7889999999755 4567
Q ss_pred HHHhC-CCCeEEE
Q psy7344 210 AYLQD-DWPLLTE 221 (240)
Q Consensus 210 ~~l~~-G~~~iti 221 (240)
+.|+. |+|.|--
T Consensus 84 qilea~GaD~IDe 96 (291)
T 3o07_A 84 QIIEALEVDYIDE 96 (291)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEec
Confidence 88999 9999844
No 78
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=97.22 E-value=0.00013 Score=63.02 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=38.5
Q ss_pred cccccCCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeec
Q psy7344 8 RIETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMG 64 (240)
Q Consensus 8 ~~~~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk 64 (240)
|+.++-|+..|-..-+||...-.. .|.+.|++|+.+.+| . ++.+.|+.-+
T Consensus 25 ~iae~aGa~av~~l~~~p~d~r~~--gGv~Rm~dp~~I~~I----~-~aVsIPVm~k 74 (291)
T 3o07_A 25 KIAEKSGACAVMALESIPADMRKS--GKVCRMSDPKMIKDI----M-NSVSIPVMAK 74 (291)
T ss_dssp HHHHHHTCSEEEECSSCHHHHHTT--TCCCCCCCHHHHHHH----H-TTCSSCEEEE
T ss_pred HHHHHhCchhhhhccCCCchhhhc--CCccccCCHHHHHHH----H-HhCCCCeEEE
Confidence 455666788888899999988744 489999999996654 4 3668998755
No 79
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.16 E-value=0.00042 Score=58.21 Aligned_cols=106 Identities=10% Similarity=0.029 Sum_probs=68.8
Q ss_pred CChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHh
Q psy7344 98 DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSP 177 (240)
Q Consensus 98 ~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~ 177 (240)
.++++++++. .. ..|+++. +...+..++.+.++.|+|+|.++.. ++.+|+.+.++ +..
T Consensus 61 ~~~~~i~~i~-~~---~ipvi~~---Ggi~~~~~~~~~~~~Gad~V~lg~~--------------~l~~p~~~~~~-~~~ 118 (241)
T 1qo2_A 61 ENLPVLEKLS-EF---AEHIQIG---GGIRSLDYAEKLRKLGYRRQIVSSK--------------VLEDPSFLKSL-REI 118 (241)
T ss_dssp TTHHHHHHGG-GG---GGGEEEE---SSCCSHHHHHHHHHTTCCEEEECHH--------------HHHCTTHHHHH-HTT
T ss_pred hhHHHHHHHH-hc---CCcEEEE---CCCCCHHHHHHHHHCCCCEEEECch--------------HhhChHHHHHH-HHc
Confidence 3467777765 42 4677655 4444444566666678998876444 56789888888 654
Q ss_pred hhccccccCCCCCCCCeeeEE-----eee-hh-----cHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCCC
Q psy7344 178 NMVHFVIAEPHCDGNDINIGC-----PQM-VA-----KRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSWT 239 (240)
Q Consensus 178 ~~~~~~i~~~~~~~~~~pvsv-----K~r-~~-----~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw~ 239 (240)
.+. .-+.+++ +++ +. ++.++++.+++ |++.|.+|+|++.+.+ .+. ||+
T Consensus 119 g~~-----------i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~--~g~-~~~ 178 (241)
T 1qo2_A 119 DVE-----------PVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTL--QEH-DFS 178 (241)
T ss_dssp TCE-----------EEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHT--CCC-CHH
T ss_pred CCc-----------EEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccC--CcC-CHH
Confidence 322 1223334 232 21 67899999999 9999999999987753 343 664
No 80
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.97 E-value=0.00088 Score=65.21 Aligned_cols=136 Identities=13% Similarity=0.057 Sum_probs=85.4
Q ss_pred CCccccccCch----hhhhh-----hhcccceeeeCChhhHHHhhhcccC---CCCceeEEeec--------CC-HHHHH
Q psy7344 72 HCDGIDINIGC----PQMVA-----KRGHYGAYLQDDWPLLTELGFKTRS---HMCGHSLMFCG--------ND-SKNLT 130 (240)
Q Consensus 72 ~~~~~dl~~gC----~~~i~-----~~g~~ga~l~~d~eli~~i~~~~~~---~~~pvivqi~g--------~d-~~~~~ 130 (240)
.+|++|++++| -|++. +...||..+.....++.+++.+++. .+.||.+.|.. .+ .++..
T Consensus 162 GfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~ 241 (729)
T 1o94_A 162 GFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQ 241 (729)
T ss_dssp TCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHH
T ss_pred CCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHH
Confidence 47888999887 22221 1224555454445666666555443 35789999853 23 45778
Q ss_pred HHHHHHccCCCEEEecCCCchhhhhcccccccc----cCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHH
Q psy7344 131 EAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYL----QDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRG 206 (240)
Q Consensus 131 ~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l----~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~ 206 (240)
++++.+++++|.+++..|........ ..... ..+++.+ +.+++. .++||.+-.++.+..
T Consensus 242 ~~~~~l~~~~d~~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~----~~i~~~-----------~~~pvi~~G~i~~~~ 304 (729)
T 1o94_A 242 KFVEMADSLVDMWDITIGDIAEWGED--AGPSRFYQQGHTIPWV----KLVKQV-----------SKKPVLGVGRYTDPE 304 (729)
T ss_dssp HHHHHHGGGCSEEEEEECCSTTGGGT--SCCTTTCCTTTTHHHH----HHHHTT-----------CSSCEECCSCCCCHH
T ss_pred HHHHHHHhhcCEEEEeeecccccccc--cCCccccCccccHHHH----HHHHHH-----------CCCEEEEeCCCCCHH
Confidence 89999988889999987731110000 00000 1134444 444455 577888888888888
Q ss_pred HHHHHHhC-CCCeEEEeccc
Q psy7344 207 HYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 207 ~~~~~l~~-G~~~itih~R~ 225 (240)
+..+.+++ ++|+|.+ ||-
T Consensus 305 ~a~~~l~~g~aD~V~~-gR~ 323 (729)
T 1o94_A 305 KMIEIVTKGYADIIGC-ARP 323 (729)
T ss_dssp HHHHHHHTTSCSBEEE-SHH
T ss_pred HHHHHHHCCCCCEEEe-Cch
Confidence 88889999 7999999 874
No 81
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.96 E-value=0.00096 Score=63.13 Aligned_cols=95 Identities=6% Similarity=-0.167 Sum_probs=62.6
Q ss_pred HHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh-ccccccCCCCCCCCeeeEEe---------
Q psy7344 130 TEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM-VHFVIAEPHCDGNDINIGCP--------- 199 (240)
Q Consensus 130 ~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~-~~~~i~~~~~~~~~~pvsvK--------- 199 (240)
..+.+.++.|+|.|.||.+|-.. ..+-..++.++.+|+.++++.+..-. .+ + +.+.+|
T Consensus 351 ~~a~~~l~aGad~V~igt~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~g~~~i--v---------v~iD~~~~~~~~~~~ 418 (555)
T 1jvn_A 351 EVASLYFRSGADKVSIGTDAVYA-AEKYYELGNRGDGTSPIETISKAYGAQAV--V---------ISVDPKRVYVNSQAD 418 (555)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHH-HHHHHHTTSCCCSCSHHHHHHHHHCGGGE--E---------EEECEEEEEESSGGG
T ss_pred HHHHHHHHcCCCEEEECCHHhhC-chhhccccccccCHHHHHHHHHHhCCCcE--E---------EEEEccccccccccc
Confidence 34555566799999999998321 11111233357899999999987532 21 0 111121
Q ss_pred ------------------------ee-h-----hcHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCCC
Q psy7344 200 ------------------------QM-V-----AKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSWT 239 (240)
Q Consensus 200 ------------------------~r-~-----~~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw~ 239 (240)
++ + .++.++++.+++ |++.|.+|+|++.+.+ +|. ||+
T Consensus 419 ~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~--~G~-d~~ 486 (555)
T 1jvn_A 419 TKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSN--SGY-DLE 486 (555)
T ss_dssp CSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTC--SCC-CHH
T ss_pred cccccccccccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCC--CCC-CHH
Confidence 11 2 247899999999 9999999999999874 564 775
No 82
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.96 E-value=0.0011 Score=63.80 Aligned_cols=138 Identities=10% Similarity=0.029 Sum_probs=84.5
Q ss_pred CCCccccccCchh----hhhh-----hhcccceeeeCChhhHHHhhhcccC---CCCceeEEee-------cCCHHHHHH
Q psy7344 71 PHCDGIDINIGCP----QMVA-----KRGHYGAYLQDDWPLLTELGFKTRS---HMCGHSLMFC-------GNDSKNLTE 131 (240)
Q Consensus 71 p~~~~~dl~~gC~----~~i~-----~~g~~ga~l~~d~eli~~i~~~~~~---~~~pvivqi~-------g~d~~~~~~ 131 (240)
-.+|.++++++|. |+++ +...||..+.....++.+++.+++. .+.|+.+.|. |.+.+++.+
T Consensus 153 aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~ 232 (671)
T 1ps9_A 153 AGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVE 232 (671)
T ss_dssp TTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHH
T ss_pred cCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHH
Confidence 3468888988873 2221 1223555444445555665554443 3578888876 346778888
Q ss_pred HHHHHcc-CCCEEEecCCCchhhhh-cccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHH
Q psy7344 132 AAKLAEP-HCDGIDINIGCPQMVAK-RGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYG 209 (240)
Q Consensus 132 aa~~le~-~~d~Idin~gCP~~~~~-~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~ 209 (240)
+++.+++ ++|.|++..|....... ...+ ..-...++ .++.+++. .++||.+-.++.+..+..
T Consensus 233 ~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~-~~~~~~~~----~~~~i~~~-----------~~iPvi~~Ggi~~~~~a~ 296 (671)
T 1ps9_A 233 LAQAIEAAGATIINTGIGWHEARIPTIATP-VPRGAFSW----VTRKLKGH-----------VSLPLVTTNRINDPQVAD 296 (671)
T ss_dssp HHHHHHHHTCSEEEEEECBTTCSSCSSSTT-SCTTTTHH----HHHHHTTS-----------CSSCEEECSSCCSHHHHH
T ss_pred HHHHHHhcCCCEEEcCCCcccccccccccc-CCcchHHH----HHHHHHHh-----------cCceEEEeCCCCCHHHHH
Confidence 8999976 89999986542211000 0000 00011223 44555555 678999888887788888
Q ss_pred HHHhC-CCCeEEEeccc
Q psy7344 210 AYLQD-DWPLLTELGKM 225 (240)
Q Consensus 210 ~~l~~-G~~~itih~R~ 225 (240)
+.+++ ++|.|.+ ||-
T Consensus 297 ~~l~~g~aD~V~~-gR~ 312 (671)
T 1ps9_A 297 DILSRGDADMVSM-ARP 312 (671)
T ss_dssp HHHHTTSCSEEEE-STH
T ss_pred HHHHcCCCCEEEe-CHH
Confidence 88888 7999999 875
No 83
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.95 E-value=0.0046 Score=55.41 Aligned_cols=126 Identities=11% Similarity=-0.017 Sum_probs=79.0
Q ss_pred ecccccccCCCccccccCchhhhhhhhcccceee-eCChhhHHHhhhcccC-CCCceeEEeecCCHHHHHHHHHHHccCC
Q psy7344 63 MGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYL-QDDWPLLTELGFKTRS-HMCGHSLMFCGNDSKNLTEAAKLAEPHC 140 (240)
Q Consensus 63 vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l-~~d~eli~~i~~~~~~-~~~pvivqi~g~d~~~~~~aa~~le~~~ 140 (240)
++.+.+.+||.++++..+. ..++..|+.+... ..+++-..+.+.+++. ...|+.+++..++ ...+..+++.++
T Consensus 44 l~~Pii~apM~~vt~~~lA--~avA~~GGlgii~~~~s~e~~~~~I~~vk~~~~~pvga~ig~~~---~e~a~~l~eaGa 118 (361)
T 3khj_A 44 LKIPLISSAMDTVTEHLMA--VGMARLGGIGIIHKNMDMESQVNEVLKVKNSGGLRVGAAIGVNE---IERAKLLVEAGV 118 (361)
T ss_dssp ESSSEEECSSTTTCSHHHH--HHHHHTTCEEEECSSSCHHHHHHHHHHHHHTTCCCCEEEECTTC---HHHHHHHHHTTC
T ss_pred cCCCEEeecCCCCCcHHHH--HHHHHcCCCeEEecCCCHHHHHHHHHHHHhccCceEEEEeCCCH---HHHHHHHHHcCc
Confidence 4456678899988877663 4566666555432 1233333333333322 2368888886555 223334446689
Q ss_pred CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeE
Q psy7344 141 DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 141 d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~i 219 (240)
|.|.||.+. .+++.+.+.++.+++. .++||.++.- .+.+.++.+++ |+|+|
T Consensus 119 d~I~ld~a~---------------G~~~~~~~~i~~i~~~-----------~~~~Vivg~v--~t~e~A~~l~~aGaD~I 170 (361)
T 3khj_A 119 DVIVLDSAH---------------GHSLNIIRTLKEIKSK-----------MNIDVIVGNV--VTEEATKELIENGADGI 170 (361)
T ss_dssp SEEEECCSC---------------CSBHHHHHHHHHHHHH-----------CCCEEEEEEE--CSHHHHHHHHHTTCSEE
T ss_pred CeEEEeCCC---------------CCcHHHHHHHHHHHHh-----------cCCcEEEccC--CCHHHHHHHHHcCcCEE
Confidence 999998661 2455566677777776 5678887543 34567888888 99999
Q ss_pred EE
Q psy7344 220 TE 221 (240)
Q Consensus 220 ti 221 (240)
.+
T Consensus 171 ~V 172 (361)
T 3khj_A 171 KV 172 (361)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 84
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=96.95 E-value=0.0002 Score=63.81 Aligned_cols=123 Identities=11% Similarity=0.053 Sum_probs=65.3
Q ss_pred ccCCCCeecccCCCchhhhhccCCCcccCCCchh--HHHHHHHhhcccCCCceeeccc-ccccCC-CccccccCchhhhh
Q psy7344 11 TEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPL--LTELVVHFSWVSKNGPLFMGPL-FIAEPH-CDGIDINIGCPQMV 86 (240)
Q Consensus 11 ~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l--~~~iv~ql~~~~~~~p~~vk~~-~~lap~-~~~~dl~~gC~~~i 86 (240)
...++|.|+||++||....... | ++++ +.+++.++. +..+.|+++|-. ....+. +... ...| ...+
T Consensus 137 ~~~gad~i~i~~~~~~~~~~~~--~-----~~~~~~~~~~i~~vr-~~~~~Pv~vK~~~~~~~~~~a~~a-~~~G-ad~I 206 (349)
T 1p0k_A 137 EMIGANALQIHLNVIQEIVMPE--G-----DRSFSGALKRIEQIC-SRVSVPVIVKEVGFGMSKASAGKL-YEAG-AAAV 206 (349)
T ss_dssp HHTTCSEEEEEECTTTTC---------------CTTHHHHHHHHH-HHCSSCEEEEEESSCCCHHHHHHH-HHHT-CSEE
T ss_pred HhcCCCeEEecccchhhhcCCC--C-----CcchHHHHHHHHHHH-HHcCCCEEEEecCCCCCHHHHHHH-HHcC-CCEE
Confidence 3457899999999997644321 2 4443 567788887 356889998731 111110 0000 1233 2233
Q ss_pred hh--hcccc--------e--------e-eeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecC
Q psy7344 87 AK--RGHYG--------A--------Y-LQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINI 147 (240)
Q Consensus 87 ~~--~g~~g--------a--------~-l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~ 147 (240)
.+ ||++. . + -...++.+.++...+ .+.|+++. +++.+..++.+++..|+|+|.++.
T Consensus 207 ~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~--~~ipvia~---GGI~~~~d~~k~l~~GAd~V~iG~ 281 (349)
T 1p0k_A 207 DIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF--PASTMIAS---GGLQDALDVAKAIALGASCTGMAG 281 (349)
T ss_dssp EEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC--TTSEEEEE---SSCCSHHHHHHHHHTTCSEEEECH
T ss_pred EEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc--CCCeEEEE---CCCCCHHHHHHHHHcCCCEEEEcH
Confidence 22 44321 0 0 012245566554433 24676655 777777788888888999999977
Q ss_pred C
Q psy7344 148 G 148 (240)
Q Consensus 148 g 148 (240)
.
T Consensus 282 ~ 282 (349)
T 1p0k_A 282 H 282 (349)
T ss_dssp H
T ss_pred H
Confidence 4
No 85
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=96.90 E-value=0.00047 Score=58.17 Aligned_cols=104 Identities=8% Similarity=-0.099 Sum_probs=41.0
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
++++++++...+ ..|+++. +.+.+..++.++++.|+|+|.++.. ++.||+.+.++.+.+-
T Consensus 67 ~~~~i~~i~~~~---~ipvi~~---Ggi~~~~~~~~~l~~Gad~V~ig~~--------------~l~dp~~~~~~~~~~g 126 (247)
T 3tdn_A 67 DTEMIRFVRPLT---TLPIIAS---GGAGKMEHFLEAFLRGADKVSINTA--------------AVENPSLITQIAQTFG 126 (247)
T ss_dssp CHHHHHHHGGGC---CSCEEEE---SCCCSHHHHHHHHHTTCSEECCSHH--------------HHHCTHHHHHHHHHHC
T ss_pred cHHHHHHHHHhC---CCCEEEe---CCCCCHHHHHHHHHcCCCeeehhhH--------------HhhChHHHHHHHHHhC
Confidence 567888776553 4787765 4444445555666678999877544 5679998888887752
Q ss_pred -hccccccCCCCCCCCee-----eEEeee-h-----hcHHHHHHHHhC-CCCeEEEeccccccc
Q psy7344 179 -MVHFVIAEPHCDGNDIN-----IGCPQM-V-----AKRGHYGAYLQD-DWPLLTELGKMAMLV 229 (240)
Q Consensus 179 -~~~~~i~~~~~~~~~~p-----vsvK~r-~-----~~~~~~~~~l~~-G~~~itih~R~~~~~ 229 (240)
+.+ + -+.+.+ ..++++ + .+..++++.+++ |++.|.+|.+++...
T Consensus 127 ~~~i--v-----~~ld~~~~~~~~~v~~~g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~ 183 (247)
T 3tdn_A 127 SQAV--V-----VAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT 183 (247)
T ss_dssp ----------------------------------------------------------------
T ss_pred CCcE--E-----EEEEeccCCCCEEEEECCCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCC
Confidence 221 0 001211 233333 2 245678999999 999999999987754
No 86
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.0011 Score=56.74 Aligned_cols=105 Identities=8% Similarity=-0.100 Sum_probs=65.6
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCC-----HHHHHHH
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDD-----WPLLTNL 173 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~-----p~~i~~i 173 (240)
+.+.++++..++ ++-+|++|+-. +. ++.+.+ .|++.|-+ |++++.| |+.++++
T Consensus 64 n~~~i~~i~~~~-----~~pv~vgGGir-~~-~~~~~l-~Ga~~Vii--------------gs~a~~~~g~~~p~~~~~~ 121 (260)
T 2agk_A 64 NDDAAREALQES-----PQFLQVGGGIN-DT-NCLEWL-KWASKVIV--------------TSWLFTKEGHFQLKRLERL 121 (260)
T ss_dssp CHHHHHHHHHHS-----TTTSEEESSCC-TT-THHHHT-TTCSCEEE--------------CGGGBCTTCCBCHHHHHHH
T ss_pred CHHHHHHHHhcC-----CceEEEeCCCC-HH-HHHHHh-cCCCEEEE--------------CcHHHhhcCCCCHHHHHHH
Confidence 466777775442 34456766654 33 777888 87776654 4557788 9999999
Q ss_pred HHHhh-hccccccCCCCCCCCeeeEEe----------ee-hh-----cHH-HHHHHHhCCCCeEEEecccccccCCCCCC
Q psy7344 174 VYSPN-MVHFVIAEPHCDGNDINIGCP----------QM-VA-----KRG-HYGAYLQDDWPLLTELGKMAMLVGILDNT 235 (240)
Q Consensus 174 v~~~~-~~~~~i~~~~~~~~~~pvsvK----------~r-~~-----~~~-~~~~~l~~G~~~itih~R~~~~~~~~~~~ 235 (240)
++.+. +. .-+++.+| ++ +. +.. ++++.+++=++.|++|+|++.+.+ +|+
T Consensus 122 ~~~~g~~~-----------ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~a~~il~t~i~~dG~~--~G~ 188 (260)
T 2agk_A 122 TELCGKDR-----------IVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKYTNEFLIHAADVEGLC--GGI 188 (260)
T ss_dssp HHHHCGGG-----------EEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTTCSEEEEEC---------CCC
T ss_pred HHHhCcCc-----------EEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHhcCEEEEEeeccccCc--CCC
Confidence 99886 33 23355555 22 21 335 888888666999999999999884 576
Q ss_pred CCCC
Q psy7344 236 GSWT 239 (240)
Q Consensus 236 adw~ 239 (240)
||+
T Consensus 189 -d~e 191 (260)
T 2agk_A 189 -DEL 191 (260)
T ss_dssp -CHH
T ss_pred -CHH
Confidence 875
No 87
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=96.68 E-value=0.0023 Score=56.55 Aligned_cols=92 Identities=11% Similarity=0.011 Sum_probs=56.9
Q ss_pred CCceeEEe-----ecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCC
Q psy7344 114 MCGHSLMF-----CGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPH 188 (240)
Q Consensus 114 ~~pvivqi-----~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~ 188 (240)
+.|++.++ .+.+++.+.++++++. ++++.++..+.+.... . |. .++..+.++++++++
T Consensus 117 d~pv~~~~~~~q~~~~~~~~~~~a~~~~~--~~a~~i~~n~~~~~~~-~--~~---~~~~~~~~~i~~vr~--------- 179 (332)
T 1vcf_A 117 KALLIANLGLAQLRRYGRDDLLRLVEMLE--ADALAFHVNPLQEAVQ-R--GD---TDFRGLVERLAELLP--------- 179 (332)
T ss_dssp SSCEEEEEEGGGGGTCCHHHHHHHHHHHT--CSEEEEECCHHHHHHT-T--SC---CCCTTHHHHHHHHCS---------
T ss_pred CceeecccChhhhhccChHHHHHHHhhcC--CCceeeccchHHHHhc-C--CC---ccHHHHHHHHHHHHc---------
Confidence 57887554 3456777777777653 5665555443333222 1 11 232224456666655
Q ss_pred CCCCCeeeEEe-eehhcHHHHHHHHhC-CCCeEEE--eccc
Q psy7344 189 CDGNDINIGCP-QMVAKRGHYGAYLQD-DWPLLTE--LGKM 225 (240)
Q Consensus 189 ~~~~~~pvsvK-~r~~~~~~~~~~l~~-G~~~iti--h~R~ 225 (240)
.++||++| +....+.+.++.+++ |+|+|++ |++|
T Consensus 180 ---~~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs~~ggt 217 (332)
T 1vcf_A 180 ---LPFPVMVKEVGHGLSREAALALRDLPLAAVDVAGAGGT 217 (332)
T ss_dssp ---CSSCEEEECSSSCCCHHHHHHHTTSCCSEEECCCBTSC
T ss_pred ---CCCCEEEEecCCCCCHHHHHHHHHcCCCEEEeCCCCCC
Confidence 25699999 444345567889999 9999999 8876
No 88
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=96.67 E-value=0.0087 Score=52.53 Aligned_cols=123 Identities=7% Similarity=-0.128 Sum_probs=71.7
Q ss_pred ccccCCCccccccCchhhhhhhhcccceeee---CChhhHHHhhhcccC-CCCceeEEeecCC---HHHHHHHHHHH-cc
Q psy7344 67 FIAEPHCDGIDINIGCPQMVAKRGHYGAYLQ---DDWPLLTELGFKTRS-HMCGHSLMFCGND---SKNLTEAAKLA-EP 138 (240)
Q Consensus 67 ~~lap~~~~~dl~~gC~~~i~~~g~~ga~l~---~d~eli~~i~~~~~~-~~~pvivqi~g~d---~~~~~~aa~~l-e~ 138 (240)
.+.+||.+.++..+. ..++..|+.|.... .+++.+.+...+++. .+.|+.+++..+. ..++.+.++.+ +.
T Consensus 18 ii~apM~gvs~~~la--~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~ 95 (328)
T 2gjl_A 18 IMQGGMQWVGRAEMA--AAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEA 95 (328)
T ss_dssp EEECCCTTTCSHHHH--HHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHT
T ss_pred EEECCCCCCCcHHHH--HHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhc
Confidence 466899876665553 45565565454322 124444433332222 2468888887751 22344555555 45
Q ss_pred CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCC
Q psy7344 139 HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWP 217 (240)
Q Consensus 139 ~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~ 217 (240)
++|+|.++.||| ++. ++.+++ ..+|+..+.. +.+.++.+++ |+|
T Consensus 96 g~d~V~~~~g~p----------------~~~----~~~l~~------------~gi~vi~~v~---t~~~a~~~~~~GaD 140 (328)
T 2gjl_A 96 GIRVVETAGNDP----------------GEH----IAEFRR------------HGVKVIHKCT---AVRHALKAERLGVD 140 (328)
T ss_dssp TCCEEEEEESCC----------------HHH----HHHHHH------------TTCEEEEEES---SHHHHHHHHHTTCS
T ss_pred CCCEEEEcCCCc----------------HHH----HHHHHH------------cCCCEEeeCC---CHHHHHHHHHcCCC
Confidence 899999998865 222 333333 2456766542 3345667777 999
Q ss_pred eEEEecccc
Q psy7344 218 LLTELGKMA 226 (240)
Q Consensus 218 ~itih~R~~ 226 (240)
+|.+++++.
T Consensus 141 ~i~v~g~~~ 149 (328)
T 2gjl_A 141 AVSIDGFEC 149 (328)
T ss_dssp EEEEECTTC
T ss_pred EEEEECCCC
Confidence 999999865
No 89
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=96.66 E-value=0.0029 Score=52.97 Aligned_cols=99 Identities=7% Similarity=-0.068 Sum_probs=61.0
Q ss_pred hhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 101 PLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 101 eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
+.++++...+ ..|+++..+-.++++ +.+.++.|+|+|-++.. ++.+|+.+.++++.....
T Consensus 65 ~~i~~i~~~~---~ipv~v~ggI~~~~~---~~~~l~~Gad~V~lg~~--------------~l~~p~~~~~~~~~~g~~ 124 (244)
T 1vzw_A 65 ALIAEVAQAM---DIKVELSGGIRDDDT---LAAALATGCTRVNLGTA--------------ALETPEWVAKVIAEHGDK 124 (244)
T ss_dssp HHHHHHHHHC---SSEEEEESSCCSHHH---HHHHHHTTCSEEEECHH--------------HHHCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHhc---CCcEEEECCcCCHHH---HHHHHHcCCCEEEECch--------------HhhCHHHHHHHHHHcCCc
Confidence 5566665432 468777644456554 44455568888876443 467899998888875433
Q ss_pred cccccCCCCCCCCeeeEEe-----ee-hh----cHHHHHHHHhC-CCCeEEEecccccccC
Q psy7344 181 HFVIAEPHCDGNDINIGCP-----QM-VA----KRGHYGAYLQD-DWPLLTELGKMAMLVG 230 (240)
Q Consensus 181 ~~~i~~~~~~~~~~pvsvK-----~r-~~----~~~~~~~~l~~-G~~~itih~R~~~~~~ 230 (240)
..+.++++ .. +. +..++++.+++ |++.|.+|++++.+.+
T Consensus 125 -----------~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~ 174 (244)
T 1vzw_A 125 -----------IAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTL 174 (244)
T ss_dssp -----------EEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC------
T ss_pred -----------EEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCccccc
Confidence 12334443 11 21 67889999999 9999999999987653
No 90
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=96.62 E-value=0.00042 Score=63.16 Aligned_cols=54 Identities=19% Similarity=0.300 Sum_probs=41.6
Q ss_pred cccCCCCeecccCCC---------chhhhhccCCCcccCCCchhHHHHHHHhhcccC-CCceeec
Q psy7344 10 ETEPHCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSK-NGPLFMG 64 (240)
Q Consensus 10 ~~~~~~d~id~N~gc---------P~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~-~~p~~vk 64 (240)
..+.|+|.|+||+|| |.-+-+...||..+.+...++.+++.++. +.. ..|+.++
T Consensus 177 a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~-~~~~~~~v~~r 240 (407)
T 3tjl_A 177 AMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLS-TIVGADKIGIR 240 (407)
T ss_dssp HHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHH-HHHCGGGEEEE
T ss_pred HHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHH-HHhCCCeEEEE
Confidence 445789999999999 96555445678779999999999999988 343 3466664
No 91
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=96.61 E-value=0.0037 Score=52.42 Aligned_cols=107 Identities=7% Similarity=-0.084 Sum_probs=67.0
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
.++++++...+ +.|+++.=+-++++ ++.+.++.|+|+|-++.. ++.+|+.+.++.+....
T Consensus 64 ~~~i~~i~~~~---~iPvi~~Ggi~~~~---~~~~~~~~Gad~V~lg~~--------------~l~~p~~~~~~~~~~~~ 123 (252)
T 1ka9_F 64 LDVVARVAERV---FIPLTVGGGVRSLE---DARKLLLSGADKVSVNSA--------------AVRRPELIRELADHFGA 123 (252)
T ss_dssp HHHHHHHHTTC---CSCEEEESSCCSHH---HHHHHHHHTCSEEEECHH--------------HHHCTHHHHHHHHHHCG
T ss_pred HHHHHHHHHhC---CCCEEEECCcCCHH---HHHHHHHcCCCEEEEChH--------------HHhCcHHHHHHHHHcCC
Confidence 45666665432 47887752223444 444445558999987544 45788888888877542
Q ss_pred ccccccCCCCCCCCeeeEEe---------ee-h-----hcHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCCC
Q psy7344 180 VHFVIAEPHCDGNDINIGCP---------QM-V-----AKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSWT 239 (240)
Q Consensus 180 ~~~~i~~~~~~~~~~pvsvK---------~r-~-----~~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw~ 239 (240)
.. ..+.+++| +. + .++.+.++.+++ |++.|.+|.+++.+.+ .+. ||+
T Consensus 124 ~~----------i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~--~g~-~~~ 186 (252)
T 1ka9_F 124 QA----------VVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTK--EGY-DLR 186 (252)
T ss_dssp GG----------EEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTC--SCC-CHH
T ss_pred Cc----------EEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCc--CCC-CHH
Confidence 10 12234443 22 2 256899999999 9999999988877653 343 554
No 92
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.60 E-value=0.0041 Score=52.18 Aligned_cols=107 Identities=9% Similarity=-0.060 Sum_probs=67.6
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
++.++++...+ ..|+++.-+-.++++ +.+.++.|+|+|.++.. ++.+|+.+.++.+....
T Consensus 63 ~~~i~~i~~~~---~ipvi~~ggI~~~~~---~~~~~~~Gad~V~lg~~--------------~l~~p~~~~~~~~~~g~ 122 (253)
T 1thf_D 63 LELVEKVAEQI---DIPFTVGGGIHDFET---ASELILRGADKVSINTA--------------AVENPSLITQIAQTFGS 122 (253)
T ss_dssp HHHHHHHHTTC---CSCEEEESSCCSHHH---HHHHHHTTCSEEEESHH--------------HHHCTHHHHHHHHHHCG
T ss_pred HHHHHHHHHhC---CCCEEEeCCCCCHHH---HHHHHHcCCCEEEEChH--------------HHhChHHHHHHHHHcCC
Confidence 56666665432 468777633345544 44555568999977444 45788888888887542
Q ss_pred ccccccCCCCCCCCeeeEEe---------ee-h-----hcHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCCC
Q psy7344 180 VHFVIAEPHCDGNDINIGCP---------QM-V-----AKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSWT 239 (240)
Q Consensus 180 ~~~~i~~~~~~~~~~pvsvK---------~r-~-----~~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw~ 239 (240)
.. ..+.+++| ++ + .+..++++.+++ |++.|.+|.+++...+ .+. ||+
T Consensus 123 ~~----------i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~--~g~-~~~ 185 (253)
T 1thf_D 123 QA----------VVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTK--SGY-DTE 185 (253)
T ss_dssp GG----------EEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSC--SCC-CHH
T ss_pred Cc----------EEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCC--CCC-CHH
Confidence 10 11234443 33 2 157889999999 9999999999887653 343 553
No 93
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=96.59 E-value=0.00032 Score=65.84 Aligned_cols=131 Identities=11% Similarity=0.001 Sum_probs=77.7
Q ss_pred ccCCCCeecccCCCch----hhhhccC-------------------CC-cccC---CCchhHHHHHHHhhcccCCCceee
Q psy7344 11 TEPHCDGIDINIGCPQ----MVAKRGH-------------------YG-AYLQ---DDWPLLTELVVHFSWVSKNGPLFM 63 (240)
Q Consensus 11 ~~~~~d~id~N~gcP~----~kv~k~~-------------------~G-~~l~---~~~~l~~~iv~ql~~~~~~~p~~v 63 (240)
.+.+++.|.|++.||+ .+..|++ .| +.+| .+|.+..+.+.++. +..+.|+.+
T Consensus 270 e~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr-~~~~~Pviv 348 (511)
T 1kbi_A 270 EKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELK-KKTKLPIVI 348 (511)
T ss_dssp HHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHH-HHCSSCEEE
T ss_pred HHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHH-HHhCCcEEE
Confidence 3457898888888998 3333221 11 2334 57888888888998 456899998
Q ss_pred cccccccCCCccccccCchhhhhhh--hcccceee-eCChhhHHHhhhcccC----CCCceeEEeecCCHHHHHHHHHHH
Q psy7344 64 GPLFIAEPHCDGIDINIGCPQMVAK--RGHYGAYL-QDDWPLLTELGFKTRS----HMCGHSLMFCGNDSKNLTEAAKLA 136 (240)
Q Consensus 64 k~~~~lap~~~~~dl~~gC~~~i~~--~g~~ga~l-~~d~eli~~i~~~~~~----~~~pvivqi~g~d~~~~~~aa~~l 136 (240)
|-. ..+.....-...| +..|.+ ||++..+. ...++++.++...+.. ...||++. +++.+..++++++
T Consensus 349 Kgv--~~~e~A~~a~~aG-ad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~---GGI~~g~Dv~kaL 422 (511)
T 1kbi_A 349 KGV--QRTEDVIKAAEIG-VSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD---GGVRRGTDVLKAL 422 (511)
T ss_dssp EEE--CSHHHHHHHHHTT-CSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE---SSCCSHHHHHHHH
T ss_pred EeC--CCHHHHHHHHHcC-CCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE---CCCCCHHHHHHHH
Confidence 721 1110000001344 344444 44321111 2235667666655421 23676655 8888888899999
Q ss_pred ccCCCEEEecCC
Q psy7344 137 EPHCDGIDINIG 148 (240)
Q Consensus 137 e~~~d~Idin~g 148 (240)
..|+|+|+|++.
T Consensus 423 alGAdaV~iGr~ 434 (511)
T 1kbi_A 423 CLGAKGVGLGRP 434 (511)
T ss_dssp HHTCSEEEECHH
T ss_pred HcCCCEEEECHH
Confidence 889999999873
No 94
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=96.56 E-value=0.0035 Score=56.50 Aligned_cols=109 Identities=4% Similarity=-0.232 Sum_probs=67.2
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEE--------------ecCCCchhh---hh--------c--ccccccc--
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGID--------------INIGCPQMV---AK--------R--GHYGAYL-- 163 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Id--------------in~gCP~~~---~~--------~--~g~G~~l-- 163 (240)
+.|...|+.....+...+..+.+++ |+.++. +|.||+.+. .. . ...++++
T Consensus 123 ~~~~~fQly~~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~ 202 (380)
T 1p4c_A 123 DGDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAA 202 (380)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHH
T ss_pred CCCeEEEEEechHHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHH
Confidence 4678889864335555566666654 676664 366884321 00 0 0111211
Q ss_pred -cC---CHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEE--ecccccccCCCCCCC
Q psy7344 164 -QD---DWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTE--LGKMAMLVGILDNTG 236 (240)
Q Consensus 164 -~~---~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti--h~R~~~~~~~~~~~a 236 (240)
+. +|+...++++++++. +++||++|.- .+.+.++.+++ |+|+|++ ||++ |.+ .+.+
T Consensus 203 ~~~~~~~p~~~~~~i~~i~~~-----------~~~Pv~vkgv--~t~e~a~~a~~aGad~I~vs~~gg~--~~d--~~~~ 265 (380)
T 1p4c_A 203 LMSRQMDASFNWEALRWLRDL-----------WPHKLLVKGL--LSAEDADRCIAEGADGVILSNHGGR--QLD--CAIS 265 (380)
T ss_dssp HTSSCCCTTCCHHHHHHHHHH-----------CCSEEEEEEE--CCHHHHHHHHHTTCSEEEECCGGGT--SCT--TCCC
T ss_pred HHHhhcCccccHHHHHHHHHh-----------cCCCEEEEec--CcHHHHHHHHHcCCCEEEEcCCCCC--cCC--CCcC
Confidence 12 565556777777777 7889999963 45677888888 9999999 7765 332 3556
Q ss_pred CCC
Q psy7344 237 SWT 239 (240)
Q Consensus 237 dw~ 239 (240)
+|+
T Consensus 266 ~~~ 268 (380)
T 1p4c_A 266 PME 268 (380)
T ss_dssp GGG
T ss_pred HHH
Confidence 664
No 95
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=96.55 E-value=0.015 Score=52.55 Aligned_cols=76 Identities=11% Similarity=0.055 Sum_probs=52.4
Q ss_pred eeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC-Cee
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN-DIN 195 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~-~~p 195 (240)
+.+++.. +.+....+...++.++|.|++|.++ .+|+.+.++++++++. . ++|
T Consensus 144 ~~~~i~~-~~~~~~~a~~~~~~G~d~i~i~~~~---------------g~~~~~~e~i~~ir~~-----------~~~~p 196 (404)
T 1eep_A 144 VGAAVSI-DIDTIERVEELVKAHVDILVIDSAH---------------GHSTRIIELIKKIKTK-----------YPNLD 196 (404)
T ss_dssp CEEEECS-CTTHHHHHHHHHHTTCSEEEECCSC---------------CSSHHHHHHHHHHHHH-----------CTTCE
T ss_pred EEEEeCC-ChhHHHHHHHHHHCCCCEEEEeCCC---------------CChHHHHHHHHHHHHH-----------CCCCe
Confidence 4556543 3333444444556689999998763 1456777788888877 4 678
Q ss_pred eEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 196 IGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 196 vsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
|.++.- .+.+.++.+++ |+|+|.+
T Consensus 197 viv~~v--~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 197 LIAGNI--VTKEAALDLISVGADCLKV 221 (404)
T ss_dssp EEEEEE--CSHHHHHHHHTTTCSEEEE
T ss_pred EEEcCC--CcHHHHHHHHhcCCCEEEE
Confidence 887533 23578888999 9999999
No 96
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=96.48 E-value=0.00083 Score=60.39 Aligned_cols=132 Identities=14% Similarity=0.094 Sum_probs=74.7
Q ss_pred ccccCCCCeecccCCCchh---------------hh-----hc-------cCCCccc------CCCchhHHHHHHHhhcc
Q psy7344 9 IETEPHCDGIDINIGCPQM---------------VA-----KR-------GHYGAYL------QDDWPLLTELVVHFSWV 55 (240)
Q Consensus 9 ~~~~~~~d~id~N~gcP~~---------------kv-----~k-------~~~G~~l------~~~~~l~~~iv~ql~~~ 55 (240)
...+.+++.|+||++||+. ++ .+ ...|+.+ +.+|++..+.+.++. +
T Consensus 144 ~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~-~ 222 (370)
T 1gox_A 144 RAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQ-T 222 (370)
T ss_dssp HHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHH-H
T ss_pred HHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHH-H
Confidence 3455679999999999986 21 11 2334444 557776667788888 4
Q ss_pred cCCCceeecccccccCCCccccccCchhhhhhh--hcccce-eeeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHH
Q psy7344 56 SKNGPLFMGPLFIAEPHCDGIDINIGCPQMVAK--RGHYGA-YLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEA 132 (240)
Q Consensus 56 ~~~~p~~vk~~~~lap~~~~~dl~~gC~~~i~~--~g~~ga-~l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~a 132 (240)
..+.|+.+|-. ..+..-..-...| +..+.+ ||+... ....+++.+.++...+.+ ..|++.. +++.+..++
T Consensus 223 ~~~~pv~vK~~--~~~e~a~~a~~~G-ad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~-~ipvia~---GGI~~~~D~ 295 (370)
T 1gox_A 223 ITSLPILVKGV--ITAEDARLAVQHG-AAGIIVSNHGARQLDYVPATIMALEEVVKAAQG-RIPVFLD---GGVRRGTDV 295 (370)
T ss_dssp HCCSCEEEECC--CSHHHHHHHHHTT-CSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTT-SSCEEEE---SSCCSHHHH
T ss_pred HhCCCEEEEec--CCHHHHHHHHHcC-CCEEEECCCCCccCCCcccHHHHHHHHHHHhCC-CCEEEEE---CCCCCHHHH
Confidence 56789887632 1110000001333 223322 332110 012345667776655432 4677665 777777788
Q ss_pred HHHHccCCCEEEecCC
Q psy7344 133 AKLAEPHCDGIDINIG 148 (240)
Q Consensus 133 a~~le~~~d~Idin~g 148 (240)
.+.+..|+|+|.++..
T Consensus 296 ~k~l~~GAdaV~iGr~ 311 (370)
T 1gox_A 296 FKALALGAAGVFIGRP 311 (370)
T ss_dssp HHHHHHTCSEEEECHH
T ss_pred HHHHHcCCCEEeecHH
Confidence 8888889999999874
No 97
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=96.41 E-value=0.015 Score=48.45 Aligned_cols=82 Identities=7% Similarity=-0.017 Sum_probs=57.3
Q ss_pred ceeEEe---ec-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 116 GHSLMF---CG-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 116 pvivqi---~g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
|+++++ .+ -+.++..++++.+++ |+|+|..|.|- ..| ..+++.++.+.+.+..
T Consensus 117 pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~--------~~g---ga~~~~i~~v~~~v~~----------- 174 (225)
T 1mzh_A 117 SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGF--------APR---GTTLEEVRLIKSSAKG----------- 174 (225)
T ss_dssp TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSC--------SSS---CCCHHHHHHHHHHHTT-----------
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCC--------CCC---CCCHHHHHHHHHHhCC-----------
Confidence 888888 33 467778889998866 89999888761 012 1588888888876532
Q ss_pred CCCeeeEEeeehhcHHHHHHHHhCCCCeEEE
Q psy7344 191 GNDINIGCPQMVAKRGHYGAYLQDDWPLLTE 221 (240)
Q Consensus 191 ~~~~pvsvK~r~~~~~~~~~~l~~G~~~iti 221 (240)
++||.+-..+.+..+..++++.|++.|-+
T Consensus 175 --~ipVia~GGI~t~~da~~~l~aGA~~iG~ 203 (225)
T 1mzh_A 175 --RIKVKASGGIRDLETAISMIEAGADRIGT 203 (225)
T ss_dssp --SSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred --CCcEEEECCCCCHHHHHHHHHhCchHHHH
Confidence 45666665566777777777669996543
No 98
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.24 E-value=0.015 Score=48.67 Aligned_cols=95 Identities=7% Similarity=-0.115 Sum_probs=66.3
Q ss_pred CceeEEeecCCH--HHHHHHHHHHccCCCEEEec--CCCchhhhhcccccc-----c--ccCCHHHHHHHHHHhhhcccc
Q psy7344 115 CGHSLMFCGNDS--KNLTEAAKLAEPHCDGIDIN--IGCPQMVAKRGHYGA-----Y--LQDDWPLLTNLVYSPNMVHFV 183 (240)
Q Consensus 115 ~pvivqi~g~d~--~~~~~aa~~le~~~d~Idin--~gCP~~~~~~~g~G~-----~--l~~~p~~i~~iv~~~~~~~~~ 183 (240)
..++..|..+|+ +.+.+.++.+++++|.|+++ .+||..- +..-. + -..+.+...++++.+++.
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~a~~~~~~ad~iel~~p~sdp~~D---G~~~~~~~~~al~~g~~~~~~~~~i~~i~~~--- 78 (248)
T 1geq_A 5 GSLIPYLTAGDPDKQSTLNFLLALDEYAGAIELGIPFSDPIAD---GKTIQESHYRALKNGFKLREAFWIVKEFRRH--- 78 (248)
T ss_dssp TEEEEEEETTSSCHHHHHHHHHHHGGGBSCEEEECCCSCCTTS---CHHHHHHHHHHHHTTCCHHHHHHHHHHHHTT---
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEECCCCCCCCCC---CHHHHHHHHHHHHCCCCHHHHHHHHHHHHhh---
Confidence 357888888877 58888888886559999998 6676541 10000 0 013666667788888776
Q ss_pred ccCCCCCCCCeeeEEeeehh-----cHHHHHHHHhC-CCCeEEEec
Q psy7344 184 IAEPHCDGNDINIGCPQMVA-----KRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 184 i~~~~~~~~~~pvsvK~r~~-----~~~~~~~~l~~-G~~~itih~ 223 (240)
+++||.+-..++ .+.++++.+.+ |+|.|++|.
T Consensus 79 --------~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~ 116 (248)
T 1geq_A 79 --------SSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD 116 (248)
T ss_dssp --------CCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred --------CCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC
Confidence 567888766432 23688999999 999999985
No 99
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.22 E-value=0.001 Score=62.96 Aligned_cols=147 Identities=7% Similarity=-0.070 Sum_probs=85.3
Q ss_pred ccccCCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeecccc---------------------
Q psy7344 9 IETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLF--------------------- 67 (240)
Q Consensus 9 ~~~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~--------------------- 67 (240)
.+.+.|+|.|.||++| ++++.+...++.++.+|+++.++....- ....-+.+.++.
T Consensus 355 ~~l~aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g--~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~ 431 (555)
T 1jvn_A 355 LYFRSGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYG--AQAVVISVDPKRVYVNSQADTKNKVFETEYPGP 431 (555)
T ss_dssp HHHHHTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHC--GGGEEEEECEEEEEESSGGGCSSCCEECSSCCT
T ss_pred HHHHcCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhC--CCcEEEEEEccccccccccccccccccccccCC
Confidence 3456789999999999 6665555556668999999998877542 111222222110
Q ss_pred ----------cccCCCccccc----------cCchhhhhhhhccc--ceeeeCChhhHHHhhhcccCCCCceeEEeecCC
Q psy7344 68 ----------IAEPHCDGIDI----------NIGCPQMVAKRGHY--GAYLQDDWPLLTELGFKTRSHMCGHSLMFCGND 125 (240)
Q Consensus 68 ----------~lap~~~~~dl----------~~gC~~~i~~~g~~--ga~l~~d~eli~~i~~~~~~~~~pvivqi~g~d 125 (240)
...++...+++ ..|| ..+..|+.+ |.+.-.|+++++++...+ ..|+|.+ ++
T Consensus 432 ~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga-~~il~t~~~~dG~~~G~d~~li~~l~~~~---~iPVIas---GG 504 (555)
T 1jvn_A 432 NGEKYCWYQCTIKGGRESRDLGVWELTRACEALGA-GEILLNCIDKDGSNSGYDLELIEHVKDAV---KIPVIAS---SG 504 (555)
T ss_dssp TCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTC-CEEEECCGGGTTTCSCCCHHHHHHHHHHC---SSCEEEC---SC
T ss_pred CCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCC-CEEEEeCCCCCCCCCCCCHHHHHHHHHhC---CccEEEE---CC
Confidence 11122211111 3332 223333322 222234789999987654 4788776 66
Q ss_pred HHHHHHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 126 SKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 126 ~~~~~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
+.+..++.++++ .+++++.++.+ +...+..+.++++.+++
T Consensus 505 i~s~~d~~~~~~~~G~~gvivg~a--------------~~~~~~~~~e~~~~l~~ 545 (555)
T 1jvn_A 505 AGVPEHFEEAFLKTRADACLGAGM--------------FHRGEFTVNDVKEYLLE 545 (555)
T ss_dssp CCSHHHHHHHHHHSCCSEEEESHH--------------HHTTSCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCChHHHHHHH--------------HHcCCCCHHHHHHHHHH
Confidence 666667777776 58999998665 23344455566666555
No 100
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=96.15 E-value=0.026 Score=50.36 Aligned_cols=126 Identities=7% Similarity=-0.009 Sum_probs=73.0
Q ss_pred cccccccCCCc-cccccCchhhhhhhhcccceeee--CChhhHHHhhhcccC-CCCceeEEeecCCHH------------
Q psy7344 64 GPLFIAEPHCD-GIDINIGCPQMVAKRGHYGAYLQ--DDWPLLTELGFKTRS-HMCGHSLMFCGNDSK------------ 127 (240)
Q Consensus 64 k~~~~lap~~~-~~dl~~gC~~~i~~~g~~ga~l~--~d~eli~~i~~~~~~-~~~pvivqi~g~d~~------------ 127 (240)
+...+.+||.+ .++..+. ..++..|+.|.... .+++.+.+...+++. .+.|+.+++....+.
T Consensus 10 ~~Pii~apMaggvs~~~la--~av~~aGglG~i~~~~~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~ 87 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLA--AAVCEAGGLGFLAAGYKTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAH 87 (369)
T ss_dssp SSSEEECCCTTTTSCHHHH--HHHHHTTSBEEEECTTSCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHH
T ss_pred cCCEEeCCCCCCCCcHHHH--HHHHHCCCEEEcCCCCCCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHH
Confidence 44567889985 6665663 55666665554322 234544433322222 135888888654321
Q ss_pred ----------------------HHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccc
Q psy7344 128 ----------------------NLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVI 184 (240)
Q Consensus 128 ----------------------~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i 184 (240)
.+.+.++.+ +.+++.|.++.|||. ++.++++. +
T Consensus 88 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~---------------~~~i~~~~----~----- 143 (369)
T 3bw2_A 88 QLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPD---------------REVIARLR----R----- 143 (369)
T ss_dssp HTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCC---------------HHHHHHHH----H-----
T ss_pred HHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCc---------------HHHHHHHH----H-----
Confidence 123444444 347889988888752 33444433 2
Q ss_pred cCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 185 AEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 185 ~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
..+++.+++. +.+.++.+++ |+|+|.++++.
T Consensus 144 -------~g~~v~~~v~---t~~~a~~a~~~GaD~i~v~g~~ 175 (369)
T 3bw2_A 144 -------AGTLTLVTAT---TPEEARAVEAAGADAVIAQGVE 175 (369)
T ss_dssp -------TTCEEEEEES---SHHHHHHHHHTTCSEEEEECTT
T ss_pred -------CCCeEEEECC---CHHHHHHHHHcCCCEEEEeCCC
Confidence 2447776653 3345777888 99999998875
No 101
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.15 E-value=0.0069 Score=50.27 Aligned_cols=103 Identities=8% Similarity=-0.109 Sum_probs=65.2
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
+++++++...+ ..|+++.-.-.++++ +.+.++.|+|+|.++.. ++.+|+.+.++.+....
T Consensus 66 ~~~i~~i~~~~---~ipvi~~g~i~~~~~---~~~~~~~Gad~V~i~~~--------------~~~~~~~~~~~~~~~g~ 125 (253)
T 1h5y_A 66 IDSVKRVAEAV---SIPVLVGGGVRSLED---ATTLFRAGADKVSVNTA--------------AVRNPQLVALLAREFGS 125 (253)
T ss_dssp HHHHHHHHHHC---SSCEEEESSCCSHHH---HHHHHHHTCSEEEESHH--------------HHHCTHHHHHHHHHHCG
T ss_pred HHHHHHHHHhc---CCCEEEECCCCCHHH---HHHHHHcCCCEEEEChH--------------HhhCcHHHHHHHHHcCC
Confidence 45666665443 468776533345554 44444568999999743 34688888888776432
Q ss_pred -ccccccCCCCCCCCee-----eEEeeeh------hcHHHHHHHHhC-CCCeEEEeccccccc
Q psy7344 180 -VHFVIAEPHCDGNDIN-----IGCPQMV------AKRGHYGAYLQD-DWPLLTELGKMAMLV 229 (240)
Q Consensus 180 -~~~~i~~~~~~~~~~p-----vsvK~r~------~~~~~~~~~l~~-G~~~itih~R~~~~~ 229 (240)
.+.+ +.+.+ +.++.+. .+..++++.+++ |++.|.+|+|++...
T Consensus 126 ~~i~~-------~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~ 181 (253)
T 1h5y_A 126 QSTVV-------AIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGT 181 (253)
T ss_dssp GGEEE-------EEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTT
T ss_pred CcEEE-------EEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCC
Confidence 1100 02221 4666661 357888999999 999999999987544
No 102
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=95.85 E-value=0.018 Score=50.03 Aligned_cols=81 Identities=14% Similarity=0.023 Sum_probs=52.4
Q ss_pred ceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 116 GHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
+++.. .|+. +.++.+++ |+++|++.. |.+...+...|+..+.+++.++++.+. +++
T Consensus 23 g~i~~---~~~~---~~a~~~~~~Ga~~I~~l~--p~~~~~~~~~G~~~~~~~~~i~~I~~~---------------~~i 79 (305)
T 2nv1_A 23 GVIMD---VINA---EQAKIAEEAGAVAVMALE--RVPADIRAAGGVARMADPTIVEEVMNA---------------VSI 79 (305)
T ss_dssp CEEEE---ESSH---HHHHHHHHTTCSEEEECC--C-------CCCCCCCCCHHHHHHHHHH---------------CSS
T ss_pred Ceeec---CCHH---HHHHHHHHcCCCEEEEcC--CCcchhhhccCcccCCCHHHHHHHHHh---------------CCC
Confidence 56554 3444 45565544 899996542 555445555677778899998888653 577
Q ss_pred eeEEeeehhcHHHHHHHHhC-CCCeEE
Q psy7344 195 NIGCPQMVAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 195 pvsvK~r~~~~~~~~~~l~~-G~~~it 220 (240)
|+.+|.|... .+.++.+++ |+|+|.
T Consensus 80 Pv~~k~r~g~-~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 80 PVMAKARIGH-IVEARVLEAMGVDYID 105 (305)
T ss_dssp CEEEEECTTC-HHHHHHHHHHTCSEEE
T ss_pred CEEecccccc-hHHHHHHHHCCCCEEE
Confidence 9999999643 456777888 999996
No 103
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.51 E-value=0.041 Score=49.21 Aligned_cols=125 Identities=10% Similarity=0.004 Sum_probs=71.6
Q ss_pred ecccccccCCCccccccCchhhhhhhhcccceeee-CChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHH-ccCC
Q psy7344 63 MGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQ-DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLA-EPHC 140 (240)
Q Consensus 63 vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l~-~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~l-e~~~ 140 (240)
++.+.+.+||...++..+. ..++..|+.+.... ...+-+.+..... ...+.+.+ ++.+...+.++.+ +.++
T Consensus 41 l~~Pii~ApM~~vte~~lA--~A~a~~Gg~gvi~~~~s~ee~~~~i~~~---~~~~~~~~--g~~~~~~e~~~~a~~aGv 113 (361)
T 3r2g_A 41 LNLPVISANMDTITESNMA--NFMHSKGAMGALHRFMTIEENIQEFKKC---KGPVFVSV--GCTENELQRAEALRDAGA 113 (361)
T ss_dssp ESSCEEECCSTTTCSHHHH--HHHHHTTCEEBCCSCSCHHHHHHHHHTC---CSCCBEEE--CSSHHHHHHHHHHHHTTC
T ss_pred cCCCEEECCCCCchHHHHH--HHHHHcCCCEEEeCCCCHHHHHHHHhhc---ceEEEEEc--CCCHHHHHHHHHHHHcCC
Confidence 3445677899777777664 56666665443221 2233333222222 12333333 4445556666666 4589
Q ss_pred CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeE
Q psy7344 141 DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 141 d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~i 219 (240)
|.|.++..+. +++.+.++++++++.. .++||.+|.- .+.+.++.+++ |+|+|
T Consensus 114 dvI~id~a~G---------------~~~~~~e~I~~ir~~~----------~~~~Vi~G~V--~T~e~A~~a~~aGaD~I 166 (361)
T 3r2g_A 114 DFFCVDVAHA---------------HAKYVGKTLKSLRQLL----------GSRCIMAGNV--ATYAGADYLASCGADII 166 (361)
T ss_dssp CEEEEECSCC---------------SSHHHHHHHHHHHHHH----------TTCEEEEEEE--CSHHHHHHHHHTTCSEE
T ss_pred CEEEEeCCCC---------------CcHhHHHHHHHHHHhc----------CCCeEEEcCc--CCHHHHHHHHHcCCCEE
Confidence 9998865531 1223445666666651 2678888632 23456888888 99999
Q ss_pred EE
Q psy7344 220 TE 221 (240)
Q Consensus 220 ti 221 (240)
.+
T Consensus 167 ~V 168 (361)
T 3r2g_A 167 KA 168 (361)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 104
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=95.49 E-value=0.01 Score=52.98 Aligned_cols=109 Identities=11% Similarity=-0.006 Sum_probs=67.6
Q ss_pred CceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhh----hcccc-------------------ccc---ccCC
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVA----KRGHY-------------------GAY---LQDD 166 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~----~~~g~-------------------G~~---l~~~ 166 (240)
.|...|+. -.|.+...+..++.+. |+.+|-+..=.|..-. .+.|+ ++. -..|
T Consensus 122 ~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 201 (352)
T 3sgz_A 122 GFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPK 201 (352)
T ss_dssp CEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCC
T ss_pred ccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccC
Confidence 46788884 4578888888888876 7777666554443100 00000 000 1123
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEecccccccCCCCCCCCC
Q psy7344 167 WPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTGSW 238 (240)
Q Consensus 167 p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw 238 (240)
|....+.++++++. +++||.+|... +.+.++.+++ |+|+|+++++...|.+ .+++.|
T Consensus 202 ~~~~w~~i~~lr~~-----------~~~PvivK~v~--~~e~A~~a~~~GaD~I~vsn~GG~~~d--~~~~~~ 259 (352)
T 3sgz_A 202 ASFCWNDLSLLQSI-----------TRLPIILKGIL--TKEDAELAMKHNVQGIVVSNHGGRQLD--EVSASI 259 (352)
T ss_dssp TTCCHHHHHHHHHH-----------CCSCEEEEEEC--SHHHHHHHHHTTCSEEEECCGGGTSSC--SSCCHH
T ss_pred CCCCHHHHHHHHHh-----------cCCCEEEEecC--cHHHHHHHHHcCCCEEEEeCCCCCccC--CCccHH
Confidence 43444456666666 78899999873 3567888889 9999999887766653 345444
No 105
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=95.28 E-value=0.025 Score=50.47 Aligned_cols=91 Identities=15% Similarity=0.105 Sum_probs=60.3
Q ss_pred HHHHHHHHHHcc-CCCEEEecCC---------CchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAEP-HCDGIDINIG---------CPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le~-~~d~Idin~g---------CP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|++..+ |+|+|+|..+ .|..-...-.||..+-..--.+.+|++++++.+ .+-+|
T Consensus 152 ~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~v----------g~~~v 221 (358)
T 4a3u_A 152 DDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATI----------GKERT 221 (358)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHH----------CGGGE
T ss_pred HHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHc----------Cccce
Confidence 456777777755 8999999876 343222334566665444446788999999874 23357
Q ss_pred EEeeeh-------------hcHHHHHHHHhC-CCCeEEEeccccc
Q psy7344 197 GCPQMV-------------AKRGHYGAYLQD-DWPLLTELGKMAM 227 (240)
Q Consensus 197 svK~r~-------------~~~~~~~~~l~~-G~~~itih~R~~~ 227 (240)
.+|+.. .....+++.+++ |++.+.++.....
T Consensus 222 ~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 266 (358)
T 4a3u_A 222 AVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVD 266 (358)
T ss_dssp EEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTT
T ss_pred EEEeccCcccCCCcccchHHHHHHHHHhhhccCcccccccccccc
Confidence 777761 123567788889 9999998765433
No 106
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=95.24 E-value=0.066 Score=47.85 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=59.1
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+.+.+++++.+.++.+ +.|+++|.++.|| +++...++++++++++ + +
T Consensus 137 v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~---------g-d 190 (384)
T 2pgw_A 137 VGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR----------------GEKLDLEITAAVRGEI---------G-D 190 (384)
T ss_dssp EEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHTTS---------T-T
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC----------------CHHHHHHHHHHHHHHc---------C-C
Confidence 4554445557898888776665 5689999999885 5566678888888872 2 5
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+++.++.. .++..++++.|++ |+++|-
T Consensus 191 ~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE 222 (384)
T 2pgw_A 191 ARLRLDANEGWSVHDAINMCRKLEKYDIEFIE 222 (384)
T ss_dssp CEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE
T ss_pred cEEEEecCCCCCHHHHHHHHHHHHhcCCCEEe
Confidence 67777655 3567889999999 999874
No 107
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=95.11 E-value=0.0036 Score=56.43 Aligned_cols=99 Identities=11% Similarity=-0.041 Sum_probs=59.8
Q ss_pred CchhHHHHHHHhhcccCCCceeecccccccCCCccccccCchhhhhhh--hcccce-eeeCChhhHHHhhhcccCCCCce
Q psy7344 41 DWPLLTELVVHFSWVSKNGPLFMGPLFIAEPHCDGIDINIGCPQMVAK--RGHYGA-YLQDDWPLLTELGFKTRSHMCGH 117 (240)
Q Consensus 41 ~~~l~~~iv~ql~~~~~~~p~~vk~~~~lap~~~~~dl~~gC~~~i~~--~g~~ga-~l~~d~eli~~i~~~~~~~~~pv 117 (240)
+|++..+++.++. +..+.|+.+|- +..+..-..-...| ...+.+ ||+... ....+++.+.++...+. .|+
T Consensus 209 ~p~~~~~~i~~i~-~~~~~Pv~vkg--v~t~e~a~~a~~aG-ad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~---~pV 281 (380)
T 1p4c_A 209 DASFNWEALRWLR-DLWPHKLLVKG--LLSAEDADRCIAEG-ADGVILSNHGGRQLDCAISPMEVLAQSVAKTG---KPV 281 (380)
T ss_dssp CTTCCHHHHHHHH-HHCCSEEEEEE--ECCHHHHHHHHHTT-CSEEEECCGGGTSCTTCCCGGGTHHHHHHHHC---SCE
T ss_pred CccccHHHHHHHH-HhcCCCEEEEe--cCcHHHHHHHHHcC-CCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcC---CeE
Confidence 7888888999998 46688988872 11110000001344 233333 443211 11234677777765442 477
Q ss_pred eEEeecCCHHHHHHHHHHHccCCCEEEecCCC
Q psy7344 118 SLMFCGNDSKNLTEAAKLAEPHCDGIDINIGC 149 (240)
Q Consensus 118 ivqi~g~d~~~~~~aa~~le~~~d~Idin~gC 149 (240)
+.. +++.+..++++.+..|+|+|.+++..
T Consensus 282 ia~---GGI~~~~dv~kal~~GAdaV~iGr~~ 310 (380)
T 1p4c_A 282 LID---SGFRRGSDIVKALALGAEAVLLGRAT 310 (380)
T ss_dssp EEC---SSCCSHHHHHHHHHTTCSCEEESHHH
T ss_pred EEE---CCCCCHHHHHHHHHhCCcHhhehHHH
Confidence 655 77777778888888899999998763
No 108
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=94.79 E-value=0.051 Score=45.76 Aligned_cols=100 Identities=6% Similarity=-0.180 Sum_probs=60.3
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhccccccccc-C--CHHHHHHHHH
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQ-D--DWPLLTNLVY 175 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~-~--~p~~i~~iv~ 175 (240)
+.++++++...+ ..|+++.-+-++++++. +.++.|+|+|-++.. ++ . +|+.++++++
T Consensus 62 ~~~~i~~i~~~~---~iPvi~~ggi~~~~~i~---~~~~~Gad~v~lg~~--------------~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 62 DTEMIRFVRPLT---TLPIIASGGAGKMEHFL---EAFLAGADKALAASV--------------FHFREIDMRELKEYLK 121 (266)
T ss_dssp CHHHHHHHGGGC---CSCEEEESCCCSTHHHH---HHHHHTCSEEECCCC--------------C------CHHHHHHCC
T ss_pred cHHHHHHHHHhc---CCCEEEECCCCCHHHHH---HHHHcCCcHhhhhHH--------------HHhCCCCHHHHHHHHH
Confidence 467777765443 47887753234555544 444458899888665 33 3 7888877766
Q ss_pred Hhh---hccccccCCCCCCCCeeeE---------Eeee-h-----hcHHHHHHHHhC-CCCeEEEeccccccc
Q psy7344 176 SPN---MVHFVIAEPHCDGNDINIG---------CPQM-V-----AKRGHYGAYLQD-DWPLLTELGKMAMLV 229 (240)
Q Consensus 176 ~~~---~~~~~i~~~~~~~~~~pvs---------vK~r-~-----~~~~~~~~~l~~-G~~~itih~R~~~~~ 229 (240)
... +. .-+.++ ++++ + .+..++++.+++ |++.|.+|.+++...
T Consensus 122 ~~g~~~~~-----------i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~ 183 (266)
T 2w6r_A 122 KHGGSGQA-----------VVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGT 183 (266)
T ss_dssp ----CCCE-----------EEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTT
T ss_pred HcCCCCCE-----------EEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcCCCEEEEEeecCCCC
Confidence 543 11 012233 3333 2 257889999999 999999999887765
No 109
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=94.78 E-value=0.1 Score=44.12 Aligned_cols=83 Identities=10% Similarity=-0.023 Sum_probs=60.6
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCC--EEEecCC--CchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCD--GIDINIG--CPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d--~Idin~g--CP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+..+|...|...+.+..+.+++ |+| .+|+--| .|+. .--|+ +++++++.
T Consensus 30 i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpni-----------t~G~~----~v~~lr~~----------- 83 (246)
T 3inp_A 30 INPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL-----------TFGPM----VLKALRDY----------- 83 (246)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-----------CCCHH----HHHHHHHH-----------
T ss_pred eehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcch-----------hcCHH----HHHHHHHh-----------
Confidence 5667888899989999998876 676 5666444 1222 12344 44555554
Q ss_pred C-CeeeEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 192 N-DINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 192 ~-~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+ ++|+-+.+.+.+..++.+.+.+ |+|.||+|.-.
T Consensus 84 ~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea 119 (246)
T 3inp_A 84 GITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEA 119 (246)
T ss_dssp TCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGG
T ss_pred CCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEcccc
Confidence 5 7799999998888889999999 99999999753
No 110
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=94.53 E-value=0.077 Score=45.46 Aligned_cols=98 Identities=10% Similarity=-0.000 Sum_probs=61.8
Q ss_pred CceeEEeecCCH--HHHHHHHHHHcc-CCCEEEecCC--Cch---hhhhcccccccc--cCCHHHHHHHHHHhhhccccc
Q psy7344 115 CGHSLMFCGNDS--KNLTEAAKLAEP-HCDGIDINIG--CPQ---MVAKRGHYGAYL--QDDWPLLTNLVYSPNMVHFVI 184 (240)
Q Consensus 115 ~pvivqi~g~d~--~~~~~aa~~le~-~~d~Idin~g--CP~---~~~~~~g~G~~l--~~~p~~i~~iv~~~~~~~~~i 184 (240)
..++.-|..+|| +.+.+.++.+++ |+|.|+|+.= =|. +.+.+.. -.+| .-+.+.+-++++.+++..
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~-~~AL~~G~~~~~~~~~v~~ir~~~--- 93 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGAN-LRSLAAGTTSSDCFDIITKVRAQH--- 93 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHC---
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHH-HHHHHcCCCHHHHHHHHHHHHhcC---
Confidence 346667766766 889999998875 8999999832 111 1111100 0001 134555667777777641
Q ss_pred cCCCCCCCCeeeEEeeehh-----cHHHHHHHHhC-CCCeEEEec
Q psy7344 185 AEPHCDGNDINIGCPQMVA-----KRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 185 ~~~~~~~~~~pvsvK~r~~-----~~~~~~~~l~~-G~~~itih~ 223 (240)
.++|+.+-.-++ -+..|++.+.+ |+|.+.+|-
T Consensus 94 -------~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~D 131 (267)
T 3vnd_A 94 -------PDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIAD 131 (267)
T ss_dssp -------TTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT
T ss_pred -------CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCC
Confidence 467877754433 24789999999 999999974
No 111
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=94.49 E-value=0.2 Score=44.59 Aligned_cols=98 Identities=15% Similarity=-0.027 Sum_probs=65.0
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
.|+.++.+...+ +.|++++.. .++ .++.+..+.|+|+|.+.-. .- +.-.| ....++.+.++.+++.
T Consensus 205 ~w~~i~~lr~~~---~~PvivK~v-~~~---e~A~~a~~~GaD~I~vsn~---GG--~~~d~--~~~~~~~L~~i~~av~ 270 (352)
T 3sgz_A 205 CWNDLSLLQSIT---RLPIILKGI-LTK---EDAELAMKHNVQGIVVSNH---GG--RQLDE--VSASIDALREVVAAVK 270 (352)
T ss_dssp CHHHHHHHHHHC---CSCEEEEEE-CSH---HHHHHHHHTTCSEEEECCG---GG--TSSCS--SCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhc---CCCEEEEec-CcH---HHHHHHHHcCCCEEEEeCC---CC--CccCC--CccHHHHHHHHHHHhC
Confidence 478888776554 479999865 233 2344444569999997321 00 01111 1466788888877653
Q ss_pred hccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEecc
Q psy7344 179 MVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGK 224 (240)
Q Consensus 179 ~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R 224 (240)
. ++||.+-..+.+-.+.++++..||+++.+ ||
T Consensus 271 ~-------------~ipVia~GGI~~g~Dv~kaLalGA~aV~i-Gr 302 (352)
T 3sgz_A 271 G-------------KIEVYMDGGVRTGTDVLKALALGARCIFL-GR 302 (352)
T ss_dssp T-------------SSEEEEESSCCSHHHHHHHHHTTCSEEEE-SH
T ss_pred C-------------CCeEEEECCCCCHHHHHHHHHcCCCEEEE-CH
Confidence 2 45777777788888999999889999998 76
No 112
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.35 E-value=0.17 Score=45.31 Aligned_cols=129 Identities=9% Similarity=-0.012 Sum_probs=72.3
Q ss_pred ecccccccCCCccccccCchhhhhhhhcccceee-eCChhhHHHhhhcccCCCCceeEEeec-CCHHHHHHHHHHHccCC
Q psy7344 63 MGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYL-QDDWPLLTELGFKTRSHMCGHSLMFCG-NDSKNLTEAAKLAEPHC 140 (240)
Q Consensus 63 vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l-~~d~eli~~i~~~~~~~~~pvivqi~g-~d~~~~~~aa~~le~~~ 140 (240)
++.+.+.+||...++..+- ..++..|+.|..- ..+++...+.+..++.. .++.+.+.. .+++....+..+++.++
T Consensus 45 l~~Pii~apM~~vs~~~lA--~avA~aGGlg~i~~~~s~e~~~~~i~~vk~~-~~l~vga~vg~~~~~~~~~~~lieaGv 121 (366)
T 4fo4_A 45 LNIPMVSASMDTVTEARLA--IALAQEGGIGFIHKNMSIEQQAAQVHQVKIS-GGLRVGAAVGAAPGNEERVKALVEAGV 121 (366)
T ss_dssp ESSSEEECCCTTTCSHHHH--HHHHHTTCEEEECSSSCHHHHHHHHHHHHTT-TSCCCEEECCSCTTCHHHHHHHHHTTC
T ss_pred cCCCEEeCCCCCCChHHHH--HHHHHcCCceEeecCCCHHHHHHHHHHHHhc-CceeEEEEeccChhHHHHHHHHHhCCC
Confidence 3445677899988876653 5567667655432 23344444333333321 234334322 23333333444456689
Q ss_pred CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeE
Q psy7344 141 DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 141 d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~i 219 (240)
|.|.|+.. + .+++.+.+.++.+++.. .++||.+..- .+.+.++.+++ |+|+|
T Consensus 122 d~I~idta--------~-------G~~~~~~~~I~~ik~~~----------p~v~Vi~G~v--~t~e~A~~a~~aGAD~I 174 (366)
T 4fo4_A 122 DVLLIDSS--------H-------GHSEGVLQRIRETRAAY----------PHLEIIGGNV--ATAEGARALIEAGVSAV 174 (366)
T ss_dssp SEEEEECS--------C-------TTSHHHHHHHHHHHHHC----------TTCEEEEEEE--CSHHHHHHHHHHTCSEE
T ss_pred CEEEEeCC--------C-------CCCHHHHHHHHHHHHhc----------CCCceEeeee--CCHHHHHHHHHcCCCEE
Confidence 99988754 1 13334445666666651 2567765321 34567888889 99999
Q ss_pred EE
Q psy7344 220 TE 221 (240)
Q Consensus 220 ti 221 (240)
.+
T Consensus 175 ~v 176 (366)
T 4fo4_A 175 KV 176 (366)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 113
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=94.27 E-value=0.12 Score=42.49 Aligned_cols=84 Identities=13% Similarity=0.138 Sum_probs=55.0
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCEEEecC--CCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDGIDINI--GCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~Idin~--gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
++..|...|+.++.+.++.+.+ |+|.|.+.. | |... .+-.-++.+++ +++. ++
T Consensus 13 i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg-~f~~--------~~~~~~~~i~~----l~~~-----------~~ 68 (230)
T 1rpx_A 13 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDG-RFVP--------NITIGPLVVDS----LRPI-----------TD 68 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBS-SSSS--------CBCCCHHHHHH----HGGG-----------CC
T ss_pred EEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccC-Cccc--------ccccCHHHHHH----HHhc-----------cC
Confidence 4556678899998888888865 788777753 2 1100 01112444444 4443 34
Q ss_pred eeeEEeeehhcHHHHHHHHhC-CCCeEEEecc
Q psy7344 194 INIGCPQMVAKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 194 ~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R 224 (240)
.|+.+-+-+.+..++++.+.+ |+|.|++|+-
T Consensus 69 ~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 69 LPLDVHLMIVEPDQRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp SCEEEEEESSSHHHHHHHHHHTTCSEEEEECS
T ss_pred CcEEEEEEecCHHHHHHHHHHcCCCEEEEEec
Confidence 466666666667778888888 9999999987
No 114
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=94.20 E-value=0.16 Score=45.44 Aligned_cols=80 Identities=5% Similarity=-0.134 Sum_probs=60.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
..|+..++...+++++.+.++.+ +.|+..|.++.|| +++.-.+.++++++++ +.
T Consensus 134 ~v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~---------g~ 188 (378)
T 3eez_A 134 PRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------DVERDIARIRDVEDIR---------EP 188 (378)
T ss_dssp CEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHTTSC---------CT
T ss_pred eEEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHHc---------CC
Confidence 35676677778999988877665 5699999999985 4566667888888872 13
Q ss_pred CeeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 193 DINIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 193 ~~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
++++.++.. .++..++++.|++ |+ +|
T Consensus 189 ~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~i 219 (378)
T 3eez_A 189 GEIVLYDVNRGWTRQQALRVMRATEDLHV-MF 219 (378)
T ss_dssp TCEEEEECTTCCCHHHHHHHHHHTGGGTC-CE
T ss_pred CceEEEECCCCCCHHHHHHHHHHhccCCe-EE
Confidence 678887776 3567889999999 98 76
No 115
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=94.03 E-value=0.25 Score=41.98 Aligned_cols=95 Identities=8% Similarity=-0.050 Sum_probs=59.1
Q ss_pred CceeEEeecCCH--HHHHHHHHHHcc-CCCEEEecCCCchhh------------hhcccccccccCCHHHHHHHHHHhhh
Q psy7344 115 CGHSLMFCGNDS--KNLTEAAKLAEP-HCDGIDINIGCPQMV------------AKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 115 ~pvivqi~g~d~--~~~~~aa~~le~-~~d~Idin~gCP~~~------------~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
..++..|..+|+ +.+.+.++.+++ |+|.|+++.--..+. +...| -+.+..-++++.+++
T Consensus 17 ~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G------~~~~~~~~~v~~ir~ 90 (268)
T 1qop_A 17 GAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAG------VTPAQCFEMLAIIRE 90 (268)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT------CCHHHHHHHHHHHHH
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcC------CCHHHHHHHHHHHHh
Confidence 346666766776 888888888876 799999976211010 01111 133444466777666
Q ss_pred ccccccCCCCCCCCeeeEEeeehh-----cHHHHHHHHhC-CCCeEEEeccc
Q psy7344 180 VHFVIAEPHCDGNDINIGCPQMVA-----KRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 180 ~~~~i~~~~~~~~~~pvsvK~r~~-----~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.. +++|+.+=..++ .+.++++.+.+ |+|++++|.=+
T Consensus 91 ~~----------~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~ 132 (268)
T 1qop_A 91 KH----------PTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVP 132 (268)
T ss_dssp HC----------SSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCC
T ss_pred cC----------CCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCC
Confidence 41 366876511121 34789999999 99999998644
No 116
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.83 E-value=0.3 Score=42.49 Aligned_cols=100 Identities=5% Similarity=-0.094 Sum_probs=60.9
Q ss_pred CCceeEEee-c-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFC-G-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~-g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
+.|+++-+- | ++++...+.++.+++ |+.+|.|-=+-..+..-|- .|..|..--+.+.+|..+....
T Consensus 83 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~-~gk~l~~~~e~~~ri~Aa~~A~---------- 151 (298)
T 3eoo_A 83 NLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHR-PGKECVPAGEMVDRIKAAVDAR---------- 151 (298)
T ss_dssp CSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCC-CCCCBCCHHHHHHHHHHHHHHC----------
T ss_pred CCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCC-CCCeecCHHHHHHHHHHHHHhc----------
Confidence 478888762 2 488888887787754 8999988655322221111 2334444444555555444333
Q ss_pred CCCeeeEEeee--------hhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 191 GNDINIGCPQM--------VAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 191 ~~~~pvsvK~r--------~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.+.++.+.-| ++++++-++++.+ |||.|-+|+.+
T Consensus 152 -~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~~ 194 (298)
T 3eoo_A 152 -TDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAMK 194 (298)
T ss_dssp -SSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred -cCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCCC
Confidence 2234444444 3456777788888 99999999975
No 117
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=93.73 E-value=0.14 Score=42.69 Aligned_cols=86 Identities=12% Similarity=0.107 Sum_probs=57.8
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++.+|...|...+.+.++.+++ |+|.|.+.. ..+.+=..+..-+ ++++.+++. ++.|
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi-------~DG~fvp~~~~g~----~~v~~lr~~-----------~~~~ 64 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDV-------MDGRFVPNITIGP----LIVDAIRPL-----------TKKT 64 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEE-------EBSSSSSCBCBCH----HHHHHHGGG-----------CCSE
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEE-------EecCCCcchhhhH----HHHHHHHhh-----------cCCc
Confidence 5667778898899998888866 788754432 1111100111123 456666665 5668
Q ss_pred eEEeeehhcHHHHHHHHhC-CCCeEEEecc
Q psy7344 196 IGCPQMVAKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 196 vsvK~r~~~~~~~~~~l~~-G~~~itih~R 224 (240)
+-+-+.+.+..++.+.+.+ |+|++++|.=
T Consensus 65 ~~vhlmv~dp~~~i~~~~~aGadgv~vh~e 94 (230)
T 1tqj_A 65 LDVHLMIVEPEKYVEDFAKAGADIISVHVE 94 (230)
T ss_dssp EEEEEESSSGGGTHHHHHHHTCSEEEEECS
T ss_pred EEEEEEccCHHHHHHHHHHcCCCEEEECcc
Confidence 8877777777778898999 9999999965
No 118
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=93.71 E-value=0.25 Score=42.36 Aligned_cols=85 Identities=13% Similarity=0.055 Sum_probs=57.5
Q ss_pred CceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+++.+.. .+.++.+++ |+++|.++.+.|...... .|..+..+++.++++.+ . ++
T Consensus 22 ~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~--~G~~~~~~~~~i~~i~~----~-----------~~ 78 (297)
T 2zbt_A 22 GGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADIRAQ--GGVARMSDPKIIKEIMA----A-----------VS 78 (297)
T ss_dssp TEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHHHHT--TCCCCCCCHHHHHHHHT----T-----------CS
T ss_pred CCeeeeech------HHHHHHHHHCCCcEEEeccccchHHHhh--cCCccCCCHHHHHHHHH----h-----------cC
Confidence 467776533 456666654 899999987766542222 34456778887766553 3 57
Q ss_pred eeeEEeeehhcHHHHHHHHhC-CCCeEEEec
Q psy7344 194 INIGCPQMVAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 194 ~pvsvK~r~~~~~~~~~~l~~-G~~~itih~ 223 (240)
+|+.++.+..+ .+.++.+++ |+|+|..|.
T Consensus 79 ~Pvi~~~~~~~-~~~~~~~~~aGad~v~~~~ 108 (297)
T 2zbt_A 79 IPVMAKVRIGH-FVEAMILEAIGVDFIDESE 108 (297)
T ss_dssp SCEEEEEETTC-HHHHHHHHHTTCSEEEEET
T ss_pred CCeEEEeccCC-HHHHHHHHHCCCCEEeeeC
Confidence 79998888654 677888888 999995543
No 119
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=93.67 E-value=0.028 Score=47.95 Aligned_cols=110 Identities=10% Similarity=-0.090 Sum_probs=59.4
Q ss_pred CCcccCCC-----chhHHHHHHHhhcccCCC--ceeec---c---cccccCCCccc------cccCch---hhhhhhhcc
Q psy7344 34 YGAYLQDD-----WPLLTELVVHFSWVSKNG--PLFMG---P---LFIAEPHCDGI------DINIGC---PQMVAKRGH 91 (240)
Q Consensus 34 ~G~~l~~~-----~~l~~~iv~ql~~~~~~~--p~~vk---~---~~~lap~~~~~------dl~~gC---~~~i~~~g~ 91 (240)
.||+++++ |+++.+++.++. .... ++.++ . .....++...+ ++.-++ ...+..|+.
T Consensus 102 igs~a~~~~g~~~p~~~~~~~~~~g--~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~a~~il~t~i 179 (260)
T 2agk_A 102 VTSWLFTKEGHFQLKRLERLTELCG--KDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKYTNEFLIHAA 179 (260)
T ss_dssp ECGGGBCTTCCBCHHHHHHHHHHHC--GGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTTCSEEEEEC-
T ss_pred ECcHHHhhcCCCCHHHHHHHHHHhC--cCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHhcCEEEEEee
Confidence 67999999 999999988875 1222 22222 0 00111232211 110000 122333443
Q ss_pred cce--eeeCChhhHHHhhhcccC-CCCceeEEeecCCHHHHHHHHHHHcc--CCCEEEecCC
Q psy7344 92 YGA--YLQDDWPLLTELGFKTRS-HMCGHSLMFCGNDSKNLTEAAKLAEP--HCDGIDINIG 148 (240)
Q Consensus 92 ~ga--~l~~d~eli~~i~~~~~~-~~~pvivqi~g~d~~~~~~aa~~le~--~~d~Idin~g 148 (240)
+.. +.-.|+++++++...+.+ ...|++.+ ++..+..++.++++. |+++++++.+
T Consensus 180 ~~dG~~~G~d~eli~~l~~~~~~~~~iPVIas---GGi~s~ed~~~l~~~~~G~~gvivg~a 238 (260)
T 2agk_A 180 DVEGLCGGIDELLVSKLFEWTKDYDDLKIVYA---GGAKSVDDLKLVDELSHGKVDLTFGSS 238 (260)
T ss_dssp ------CCCCHHHHHHHHHHHTTCSSCEEEEE---SCCCCTHHHHHHHHHHTTCEEEECCTT
T ss_pred ccccCcCCCCHHHHHHHHHhhcccCCceEEEe---CCCCCHHHHHHHHHhcCCCCEEEeeCC
Confidence 332 223479999998765410 03688776 555555566666654 8999999887
No 120
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=93.64 E-value=0.36 Score=41.77 Aligned_cols=104 Identities=8% Similarity=-0.095 Sum_probs=61.3
Q ss_pred CCceeEEee-c-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccc-cccccCCHHHHHHHHHHhhhccccccCCCC
Q psy7344 114 MCGHSLMFC-G-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHY-GAYLQDDWPLLTNLVYSPNMVHFVIAEPHC 189 (240)
Q Consensus 114 ~~pvivqi~-g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~-G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~ 189 (240)
+.|+++-+- | ++++...+.++.+++ |+.+|.|-=+-..++..|-+. |..|..-.+.+.+|..+.....
T Consensus 75 ~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~-------- 146 (290)
T 2hjp_A 75 SIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARA-------- 146 (290)
T ss_dssp SSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCS--------
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcc--------
Confidence 578887762 2 488888887777765 899998876642232222221 3334333344555554443331
Q ss_pred CCCCeeeEEeee-------hhcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 190 DGNDINIGCPQM-------VAKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 190 ~~~~~pvsvK~r-------~~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
. .++-|..++. ++.+++-++++++ |||.|.+|+|..
T Consensus 147 ~-~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~~ 190 (290)
T 2hjp_A 147 D-RDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQK 190 (290)
T ss_dssp S-TTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred c-CCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCCC
Confidence 0 2334445443 2567778888899 999999999543
No 121
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=93.48 E-value=0.3 Score=42.63 Aligned_cols=101 Identities=9% Similarity=-0.105 Sum_probs=63.4
Q ss_pred CCceeEEee-c-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFC-G-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~-g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
+.|+++-+- | ++++...+.++.+++ |+.+|.|-=+-..+..-|- .|..| ...+...+-+++++++-
T Consensus 89 ~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~-~gk~l-~~~~e~~~rI~Aa~~A~--------- 157 (305)
T 3ih1_A 89 DLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHL-NGKKL-VTTEELVQKIKAIKEVA--------- 157 (305)
T ss_dssp CCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCT-TCCCB-CCHHHHHHHHHHHHHHC---------
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCC-CCCcc-cCHHHHHHHHHHHHHcC---------
Confidence 468888762 2 478887888887755 8999988766322211111 23333 45554444444445441
Q ss_pred CCCeeeEEeee------hhcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 191 GNDINIGCPQM------VAKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 191 ~~~~pvsvK~r------~~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
.++.|.+++. ++.+++-++++++ |||.|.+|+...
T Consensus 158 -~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~~~ 199 (305)
T 3ih1_A 158 -PSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEALQS 199 (305)
T ss_dssp -TTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTCCS
T ss_pred -CCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 4455666655 3467788888899 999999998754
No 122
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=93.45 E-value=0.25 Score=44.00 Aligned_cols=79 Identities=10% Similarity=0.049 Sum_probs=57.9
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+...+++++.+.++.+ +.|+++|.++.|+ +++...++++++++++ +.+
T Consensus 135 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~---------g~d 189 (379)
T 2rdx_A 135 APMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------DWQSDIDRIRACLPLL---------EPG 189 (379)
T ss_dssp EEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHGGGS---------CTT
T ss_pred eeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------CHHHHHHHHHHHHHhc---------CCC
Confidence 4554444446888888776665 5689999998884 4566678888888872 136
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+++.++.. .++..++++.|++ |+ +|
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~~~i-~i 219 (379)
T 2rdx_A 190 EKAMADANQGWRVDNAIRLARATRDLDY-IL 219 (379)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHTTTSCC-EE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhCCe-EE
Confidence 78888766 3567889999999 99 76
No 123
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=93.39 E-value=0.19 Score=41.88 Aligned_cols=85 Identities=16% Similarity=0.056 Sum_probs=58.8
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCC--EEEecCCC--chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCD--GIDINIGC--PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d--~Idin~gC--P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+..+|..-|...+.+..+.+++ |+| ++|+--|- |+. .--|+.++++.+.. +
T Consensus 7 i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~-----------~~G~~~v~~ir~~~--~----------- 62 (228)
T 3ovp_A 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNI-----------TFGHPVVESLRKQL--G----------- 62 (228)
T ss_dssp EEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCB-----------CBCHHHHHHHHHHH--C-----------
T ss_pred eeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCccc-----------ccCHHHHHHHHHhh--C-----------
Confidence 4456667788888898888876 676 56665441 222 12455555554431 1
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.++|+.+++.+.+..++.+.+.+ |+|.||+|.=.
T Consensus 63 ~~~~~dvhLmv~~p~~~i~~~~~aGad~itvH~Ea 97 (228)
T 3ovp_A 63 QDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEA 97 (228)
T ss_dssp SSSCEEEEEECSCGGGGHHHHHHHTCSEEEEEGGG
T ss_pred CCCcEEEEEEeCCHHHHHHHHHHcCCCEEEEccCC
Confidence 35689999998877888899999 99999999843
No 124
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=93.36 E-value=0.18 Score=44.51 Aligned_cols=81 Identities=21% Similarity=0.080 Sum_probs=57.8
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+...+++++.+.++.+ +.|++.|.++.||+ +++...++++++++++ +.+
T Consensus 134 vp~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~---------g~~ 189 (359)
T 1mdl_A 134 VQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAV---------GDD 189 (359)
T ss_dssp EEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHH---------CSS
T ss_pred eeeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHh---------CCC
Confidence 4554443235788887766655 56899999998862 4556667788888762 136
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+++.++.. .++..++++.|++ |+++|
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 220 (359)
T 1mdl_A 190 FGIMVDYNQSLDVPAAIKRSQALQQEGVTWI 220 (359)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHHHHTCSCE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCCCeE
Confidence 78887766 3567889999999 99987
No 125
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=93.30 E-value=0.12 Score=43.57 Aligned_cols=97 Identities=11% Similarity=0.039 Sum_probs=60.5
Q ss_pred CceeEEeecCCH--HHHHHHHHHHcc-CCCEEEecCCCchhhhhcccc-----cccc--cCCHHHHHHHHHHhhhccccc
Q psy7344 115 CGHSLMFCGNDS--KNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHY-----GAYL--QDDWPLLTNLVYSPNMVHFVI 184 (240)
Q Consensus 115 ~pvivqi~g~d~--~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~-----G~~l--~~~p~~i~~iv~~~~~~~~~i 184 (240)
..++..|..+|+ +++.+.++.+++ |+|.|+++.-+..+.. .+.. ..++ ..+++...++++.+++.
T Consensus 18 ~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~-dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~---- 92 (262)
T 1rd5_A 18 TAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYI-DGPIIQASVARALASGTTMDAVLEMLREVTPE---- 92 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTT-SCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG----
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCccc-CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc----
Confidence 346666666666 788888888865 7999999876543221 0000 0000 13677777888888887
Q ss_pred cCCCCCCCCeeeEEeeehhcHH-HHHHHHhC-CCCeEEEec
Q psy7344 185 AEPHCDGNDINIGCPQMVAKRG-HYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 185 ~~~~~~~~~~pvsvK~r~~~~~-~~~~~l~~-G~~~itih~ 223 (240)
+++|+.+..+++... ...+.+.+ |+|++++|.
T Consensus 93 -------~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d 126 (262)
T 1rd5_A 93 -------LSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPD 126 (262)
T ss_dssp -------CSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTT
T ss_pred -------CCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcC
Confidence 678988865443211 11223666 999999875
No 126
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.28 E-value=0.15 Score=42.19 Aligned_cols=87 Identities=20% Similarity=0.203 Sum_probs=55.5
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++.+|...|..++.+.++.+++ |+|.|.+.. ..+.+-..+-.-++.++++ ++. ++.|
T Consensus 9 i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i-------~Dg~fv~~~~~~~~~~~~l----r~~-----------~~~~ 66 (228)
T 1h1y_A 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDI-------MDGHFVPNLTIGAPVIQSL----RKH-----------TKAY 66 (228)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEE-------EBSSSSSCBCBCHHHHHHH----HTT-----------CCSE
T ss_pred EEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEE-------ecCCcCcchhhCHHHHHHH----Hhh-----------cCCc
Confidence 5667888898888888888865 788755432 1111100111235555444 443 4456
Q ss_pred eEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 196 IGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+.+-+-+.+..++.+.+.+ |+|.|++|+-.
T Consensus 67 ~~v~lmv~d~~~~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 67 LDCHLMVTNPSDYVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp EEEEEESSCGGGGHHHHHHHTCSEEEEEGGG
T ss_pred EEEEEEecCHHHHHHHHHHcCCCEEEECCCC
Confidence 6666666666778888888 99999999854
No 127
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=93.21 E-value=0.34 Score=42.36 Aligned_cols=105 Identities=12% Similarity=-0.098 Sum_probs=58.6
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHc-cCCCEEEec-CCCchh---hhhcc----cc---cccccCCH
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAE-PHCDGIDIN-IGCPQM---VAKRG----HY---GAYLQDDW 167 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le-~~~d~Idin-~gCP~~---~~~~~----g~---G~~l~~~p 167 (240)
++.++.+.. + +.|++++..+.+ .+. +.++.++ .|+|+|.+. .|.... ...+. +. -..-...+
T Consensus 171 ~~~i~~vr~-~---~~Pv~vK~v~~g-~~~-e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~ 244 (332)
T 1vcf_A 171 VERLAELLP-L---PFPVMVKEVGHG-LSR-EAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTA 244 (332)
T ss_dssp HHHHHHHCS-C---SSCEEEECSSSC-CCH-HHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHH
T ss_pred HHHHHHHHc-C---CCCEEEEecCCC-CCH-HHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHH
Confidence 455555544 3 579999942222 112 2345554 489999983 222110 00010 00 00012445
Q ss_pred HHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 168 PLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 168 ~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
+.+.++.+++ .++||.+-..+.+..+.++++..|||++.+ ||-
T Consensus 245 ~~l~~v~~~~--------------~~ipvia~GGI~~~~d~~kal~~GAd~V~i-gr~ 287 (332)
T 1vcf_A 245 RAILEVREVL--------------PHLPLVASGGVYTGTDGAKALALGADLLAV-ARP 287 (332)
T ss_dssp HHHHHHHHHC--------------SSSCEEEESSCCSHHHHHHHHHHTCSEEEE-CGG
T ss_pred HHHHHHHHhc--------------CCCeEEEECCCCCHHHHHHHHHhCCChHhh-hHH
Confidence 6565555542 156788777788888888888779999998 774
No 128
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=93.16 E-value=0.14 Score=44.41 Aligned_cols=49 Identities=14% Similarity=0.045 Sum_probs=29.7
Q ss_pred ccccCCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeec
Q psy7344 9 IETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMG 64 (240)
Q Consensus 9 ~~~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk 64 (240)
...+.|+|.|.+. ||+++..+...|+.++++++.+.++.. ..+.|+.++
T Consensus 36 ~~~~~Ga~~I~~l--~p~~~~~~~~~G~~~~~~~~~i~~I~~-----~~~iPv~~k 84 (305)
T 2nv1_A 36 IAEEAGAVAVMAL--ERVPADIRAAGGVARMADPTIVEEVMN-----AVSIPVMAK 84 (305)
T ss_dssp HHHHTTCSEEEEC--CC-------CCCCCCCCCHHHHHHHHH-----HCSSCEEEE
T ss_pred HHHHcCCCEEEEc--CCCcchhhhccCcccCCCHHHHHHHHH-----hCCCCEEec
Confidence 4456689999544 388888888888899999998776532 346887765
No 129
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=93.14 E-value=0.14 Score=42.85 Aligned_cols=83 Identities=22% Similarity=0.212 Sum_probs=58.8
Q ss_pred eeEEeecCCHHHHHHHHHHHccCCCE--EEecCCC--chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEPHCDG--IDINIGC--PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~~~d~--Idin~gC--P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
+..+|..-|...+.+..+.++.++|. +|+=-|. |+. .+ -++ +++++++. +
T Consensus 3 i~pSila~D~~~l~~~i~~~~~gad~lHvDvmDG~fvpn~-----t~------G~~----~v~~lr~~-----------~ 56 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNL-----TL------SPF----FVSQVKKL-----------A 56 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHTTCSCEEEEEECSSSSSCC-----CB------CHH----HHHHHHTT-----------C
T ss_pred EEeehhhCChhhHHHHHHHHHcCCCEEEEEEEeCccCccc-----hh------cHH----HHHHHHhc-----------c
Confidence 34567778888888888888557775 5654442 321 11 233 56666665 5
Q ss_pred CeeeEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 193 DINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 193 ~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+.|+-+-+.+.+...+.+.+.+ |+|.+|+|.=.
T Consensus 57 ~~~~dvhLmv~dp~~~i~~~~~aGAd~itvh~Ea 90 (231)
T 3ctl_A 57 TKPLDCHLMVTRPQDYIAQLARAGADFITLHPET 90 (231)
T ss_dssp CSCEEEEEESSCGGGTHHHHHHHTCSEEEECGGG
T ss_pred CCcEEEEEEecCHHHHHHHHHHcCCCEEEECccc
Confidence 7788888888787888899999 99999999754
No 130
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=93.10 E-value=0.19 Score=40.54 Aligned_cols=82 Identities=13% Similarity=0.010 Sum_probs=51.9
Q ss_pred eeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC-Cee
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN-DIN 195 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~-~~p 195 (240)
+++.+...+.++..+.++.+..+++.|+++.+ +..+ .| ++.+ +.+++. . +.|
T Consensus 3 li~a~d~~~~~~~~~~~~~~~~~v~~iev~~~--~~~~----~g------~~~i----~~l~~~-----------~~~~~ 55 (207)
T 3ajx_A 3 LQVAIDLLSTEAALELAGKVAEYVDIIELGTP--LIKA----EG------LSVI----TAVKKA-----------HPDKI 55 (207)
T ss_dssp EEEEECCSCHHHHHHHHHHHGGGCSEEEECHH--HHHH----HC------THHH----HHHHHH-----------STTSE
T ss_pred EEEEeCCCCHHHHHHHHHHhhccCCEEEECcH--HHHh----hC------HHHH----HHHHHh-----------CCCCe
Confidence 44455456788888888888668899999554 2211 11 3344 444443 3 567
Q ss_pred eEEeeehhc-HHHHHHHHhC-CCCeEEEeccc
Q psy7344 196 IGCPQMVAK-RGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r~~~-~~~~~~~l~~-G~~~itih~R~ 225 (240)
+.+-+.+.+ ...+++.+.+ |+|++++|.=.
T Consensus 56 i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~ 87 (207)
T 3ajx_A 56 VFADMKTMDAGELEADIAFKAGADLVTVLGSA 87 (207)
T ss_dssp EEEEEEECSCHHHHHHHHHHTTCSEEEEETTS
T ss_pred EEEEEEecCccHHHHHHHHhCCCCEEEEeccC
Confidence 775333334 4567888888 99999999743
No 131
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=93.09 E-value=0.2 Score=40.39 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=31.6
Q ss_pred CceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCc
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCP 150 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP 150 (240)
.|+++.+.+.|.+++.+.++.+.+ |++.|+++.+||
T Consensus 10 ~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~ 46 (205)
T 1wa3_A 10 HKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVP 46 (205)
T ss_dssp HCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTST
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCh
Confidence 579999999999999999998866 799999988865
No 132
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=93.00 E-value=0.38 Score=43.07 Aligned_cols=80 Identities=8% Similarity=-0.099 Sum_probs=59.4
Q ss_pred CceeEEe-e-cCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 115 CGHSLMF-C-GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 115 ~pvivqi-~-g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
.|+...+ . ..+++++.+.++.+ +.|++.+.++.|| +++.-.++++++++++ +
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~---------g 193 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------APRKDAANLRAMRQRV---------G 193 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHH---------C
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------CHHHHHHHHHHHHHHc---------C
Confidence 5666665 4 57899888877765 5699999999885 4556667778887762 1
Q ss_pred CCeeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 192 NDINIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 192 ~~~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
.++++.++.. .++..++++.|++ |+++|
T Consensus 194 ~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i 226 (389)
T 3ozy_A 194 ADVEILVDANQSLGRHDALAMLRILDEAGCYWF 226 (389)
T ss_dssp TTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCceEEEECCCCcCHHHHHHHHHHHHhcCCCEE
Confidence 3567777765 3567889999999 99988
No 133
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=92.97 E-value=0.89 Score=39.25 Aligned_cols=164 Identities=8% Similarity=0.004 Sum_probs=85.6
Q ss_pred hccCCCcccCCCchhHHHHHHHhhcccCCCceeecc-----cccccCCCccccc---------cCchhhhhhhhccccee
Q psy7344 30 KRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGP-----LFIAEPHCDGIDI---------NIGCPQMVAKRGHYGAY 95 (240)
Q Consensus 30 ~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~-----~~~lap~~~~~dl---------~~gC~~~i~~~g~~ga~ 95 (240)
+-.+-|+-.+....-+..++..++ +...-|...+. ..-++.+.|.+-| .--|-. +...++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~IDhTlL~p~~T~~dI~~lc~e--A~~~g~aa- 90 (288)
T 3oa3_A 15 QTQGPGSMSSLNNEEWDLLISGKK-ATLQYPIPLLCYPAPEVVSIAQIIDHTQLSLSATGSQIDVLCAE--AKEYGFAT- 90 (288)
T ss_dssp -------CTTCCHHHHHHHHHHHH-TTSCSSCCCSCSCCCCGGGGGGGEEEECCCTTCCHHHHHHHHHH--HHHHTCSE-
T ss_pred cccCCCCCCCCCcHHHHHHHHHHH-HhcCCccccccCCCCCHHHHHHhcCcccCCCCCCHHHHHHHHHH--HHhcCCcE-
Confidence 445678888888888888888887 23321333321 1223444444422 112212 12222333
Q ss_pred eeCChhhHHHhhhcccCCCCceeEEee---cC-CHH-HHHHHHHHHccCCCEEE--ecCCCchhhhhcccccccccCCHH
Q psy7344 96 LQDDWPLLTELGFKTRSHMCGHSLMFC---GN-DSK-NLTEAAKLAEPHCDGID--INIGCPQMVAKRGHYGAYLQDDWP 168 (240)
Q Consensus 96 l~~d~eli~~i~~~~~~~~~pvivqi~---g~-d~~-~~~~aa~~le~~~d~Id--in~gCP~~~~~~~g~G~~l~~~p~ 168 (240)
...+|.++......+...+.++...+. |. ..+ ...++...++.|+|.|| ||.| +..-.+|+
T Consensus 91 VCV~P~~V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig------------~lk~g~~~ 158 (288)
T 3oa3_A 91 VCVRPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYP------------WLSEKRYT 158 (288)
T ss_dssp EEECGGGHHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHH------------HHHTTCHH
T ss_pred EEECHHHHHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehh------------hhcCCcHH
Confidence 223477777665555333344433332 22 222 34456666788999999 7766 11235888
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh-------hcHHHHHHHHhC-CCCeEEE
Q psy7344 169 LLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV-------AKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 169 ~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~-------~~~~~~~~~l~~-G~~~iti 221 (240)
.+.+-++.+++. ..-| .+|+-+ +.....++...+ |+|+|--
T Consensus 159 ~v~~eI~~V~~a-----------~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKT 207 (288)
T 3oa3_A 159 DVFQDIRAVRLA-----------AKDA-ILKVILETSQLTADEIIAGCVLSSLAGADYVKT 207 (288)
T ss_dssp HHHHHHHHHHHH-----------TTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHHHH-----------hcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEEc
Confidence 888888888876 2223 255542 234456777778 9999854
No 134
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=92.80 E-value=0.21 Score=40.64 Aligned_cols=85 Identities=13% Similarity=0.161 Sum_probs=53.3
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCEEEecC--CCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDGIDINI--GCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~Idin~--gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
+...|...|..++.+.++.+++ |+|.+.+-. |. +-..+...++.++++.+. ++
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~---------~~~~~~~g~~~i~~i~~~---------------~~ 61 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEETDAEYVHIDIMDGQ---------FVPNISFGADVVASMRKH---------------SK 61 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSS---------SSSCBCBCHHHHHHHHTT---------------CC
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCC---------CCCccccCHHHHHHHHHh---------------CC
Confidence 3445667899888888888865 677754432 31 001122236766665542 34
Q ss_pred eeeEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 194 INIGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 194 ~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.|+.+-+-+.+..++.+.+.+ |+|.+++|+-.
T Consensus 62 ~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 62 LVFDCHLMVVDPERYVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp SEEEEEEESSSGGGGHHHHHHHTCSEEEEEGGG
T ss_pred CCEEEEEeecCHHHHHHHHHHcCCCEEEEccCc
Confidence 466655555555556688888 99999999854
No 135
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=92.56 E-value=0.67 Score=40.14 Aligned_cols=102 Identities=10% Similarity=-0.093 Sum_probs=59.5
Q ss_pred CCceeEEee-c-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccc-cccccCCHHHHHHHHHHhhhccccccCCCC
Q psy7344 114 MCGHSLMFC-G-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHY-GAYLQDDWPLLTNLVYSPNMVHFVIAEPHC 189 (240)
Q Consensus 114 ~~pvivqi~-g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~-G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~ 189 (240)
+.|+++-+- | +++....+.++.+++ |+.+|.|-=+-..++.-|-+. +..|..-.+.+.+|..+.....
T Consensus 79 ~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~-------- 150 (295)
T 1s2w_A 79 DVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQT-------- 150 (295)
T ss_dssp SSCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCS--------
T ss_pred CCCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcc--------
Confidence 578888763 2 467777777777654 899999876643333323221 2334443444555554443330
Q ss_pred CCCCeeeEEeee-h------hcHHHHHHHHhC-CCCeEEEecc
Q psy7344 190 DGNDINIGCPQM-V------AKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 190 ~~~~~pvsvK~r-~------~~~~~~~~~l~~-G~~~itih~R 224 (240)
+.++-|..+.. . +.+++-++++++ |||.|.+|+.
T Consensus 151 -~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~ 192 (295)
T 1s2w_A 151 -DPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSK 192 (295)
T ss_dssp -STTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred -cCCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 12344555544 2 567778888999 9999999974
No 136
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.53 E-value=0.77 Score=41.49 Aligned_cols=64 Identities=14% Similarity=-0.016 Sum_probs=41.9
Q ss_pred HHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHH
Q psy7344 131 EAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYG 209 (240)
Q Consensus 131 ~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~ 209 (240)
+.++.+ +.++|.|.++.+- .+++.+.++++.+++. .++||.++.- .+.+.+
T Consensus 147 e~~~~lveaGvdvIvldta~---------------G~~~~~~e~I~~ik~~-----------~~i~Vi~g~V--~t~e~A 198 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSAH---------------GHSLNIIRTLKEIKSK-----------MNIDVIVGNV--VTEEAT 198 (400)
T ss_dssp HHHHHHHHHTCSEEEECCSC---------------CSBHHHHHHHHHHHTT-----------CCCEEEEEEE--CSHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCC---------------CCcccHHHHHHHHHhc-----------CCCeEEEeec--CCHHHH
Confidence 334443 5578888775441 1445555677777665 5678887532 346778
Q ss_pred HHHhC-CCCeEEEe
Q psy7344 210 AYLQD-DWPLLTEL 222 (240)
Q Consensus 210 ~~l~~-G~~~itih 222 (240)
+.+++ |+|+|.++
T Consensus 199 ~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 199 KELIENGADGIKVG 212 (400)
T ss_dssp HHHHHTTCSEEEEC
T ss_pred HHHHHcCCCEEEEe
Confidence 88888 99999993
No 137
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=92.33 E-value=0.56 Score=41.12 Aligned_cols=103 Identities=5% Similarity=-0.127 Sum_probs=61.9
Q ss_pred CCceeEEee-c-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFC-G-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~-g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
+.|+++-+- | ++++...+.++.+++ |+.+|.|-=+-..++.-|- .|..|..-.+.+.+|..+.....
T Consensus 101 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~-~gk~L~p~~e~~~rI~Aa~~A~~--------- 170 (318)
T 1zlp_A 101 NLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHM-RGKAVVPAEEHALKIAAAREAIG--------- 170 (318)
T ss_dssp SSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSS-SCCCBCCHHHHHHHHHHHHHHHT---------
T ss_pred CCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCC-CCCccCCHHHHHHHHHHHHHhcc---------
Confidence 478888873 2 388888887777755 8999988766322222222 13334444444444444433330
Q ss_pred CCCeeeEEeee------hhcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 191 GNDINIGCPQM------VAKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 191 ~~~~pvsvK~r------~~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
..++-|..+.. ++..++-++++++ |||.|.+++...
T Consensus 171 ~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~~~ 213 (318)
T 1zlp_A 171 DSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAPAN 213 (318)
T ss_dssp TSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred cCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 02334444443 2467778888899 999999998653
No 138
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=92.29 E-value=0.34 Score=45.00 Aligned_cols=68 Identities=10% Similarity=-0.042 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC-CeeeEEeeehhc
Q psy7344 126 SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN-DINIGCPQMVAK 204 (240)
Q Consensus 126 ~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~-~~pvsvK~r~~~ 204 (240)
+.....+.++++.++|+|.||.+|. ++....++++++++. . ++||.+|.- .
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~-----------~~~~pvi~~~v--~ 305 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQG---------------NSVYQIAMVHYIKQK-----------YPHLQVIGGNV--V 305 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC---------------CSHHHHHHHHHHHHH-----------CTTCEEEEEEE--C
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCC---------------cchhHHHHHHHHHHh-----------CCCCceEeccc--c
Confidence 3444445555566899999988851 233444666666666 4 678888632 3
Q ss_pred HHHHHHHHhC-CCCeEEE
Q psy7344 205 RGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 205 ~~~~~~~l~~-G~~~iti 221 (240)
+.+.++.+++ |+|+|.+
T Consensus 306 t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 306 TAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp SHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHcCCCEEEE
Confidence 4567899999 9999988
No 139
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=92.21 E-value=0.3 Score=43.32 Aligned_cols=71 Identities=15% Similarity=0.094 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++++.+.++.+ +.|++.|.|+.||+ +++...++++++++++ +.++++.++..
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~---------G~d~~l~vDan~~ 201 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP---------------DLKEDVDRVSALREHL---------GDSFPLMVDANMK 201 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHH---------CTTSCEEEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHh---------CCCCeEEEECCCC
Confidence 788887766655 66899999999863 4556667778887762 13567777766
Q ss_pred --hhcHHHHHHHHhC-CCCeE
Q psy7344 202 --VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 --~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 202 ~~~~~a~~~~~~l~~~~i~~i 222 (371)
T 2ovl_A 202 WTVDGAIRAARALAPFDLHWI 222 (371)
T ss_dssp SCHHHHHHHHHHHGGGCCSEE
T ss_pred CCHHHHHHHHHHHHhcCCCEE
Confidence 3567899999999 99987
No 140
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=92.17 E-value=0.26 Score=44.09 Aligned_cols=80 Identities=14% Similarity=-0.056 Sum_probs=56.7
Q ss_pred CceeEEee-cCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.|+...+. .++++++.+.++.+ +.|+++|.|+.|| .+++. .++++++++++ +.
T Consensus 153 vp~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~---------g~ 207 (388)
T 2nql_A 153 FPAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV---------------ADDGP-AAEIANLRQVL---------GP 207 (388)
T ss_dssp EEEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHH---------CT
T ss_pred eEeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHh---------CC
Confidence 46555443 35888888776665 5689999998774 13445 57777777762 13
Q ss_pred CeeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 193 DINIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 193 ~~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
++++.++.. .++..++++.|++ |+++|
T Consensus 208 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 239 (388)
T 2nql_A 208 QAKIAADMHWNQTPERALELIAEMQPFDPWFA 239 (388)
T ss_dssp TSEEEEECCSCSCHHHHHHHHHHHGGGCCSCE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhcCCCEE
Confidence 678887766 3567899999999 99987
No 141
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=92.15 E-value=0.47 Score=38.24 Aligned_cols=76 Identities=12% Similarity=0.028 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehh
Q psy7344 124 NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVA 203 (240)
Q Consensus 124 ~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~ 203 (240)
.+.++..+.++.+..++|.||++. |+... . | ++.+ +.+++.. .++|+.+..-+.
T Consensus 10 ~~~~~~~~~~~~~~~~~diie~G~--p~~~~--~--g------~~~i----~~ir~~~----------~~~~i~~~~~~~ 63 (211)
T 3f4w_A 10 LTLPEAMVFMDKVVDDVDIIEVGT--PFLIR--E--G------VNAI----KAIKEKY----------PHKEVLADAKIM 63 (211)
T ss_dssp CCHHHHHHHHHHHGGGCSEEEECH--HHHHH--H--T------THHH----HHHHHHC----------TTSEEEEEEEEC
T ss_pred CCHHHHHHHHHHhhcCccEEEeCc--HHHHh--c--c------HHHH----HHHHHhC----------CCCEEEEEEEec
Confidence 577788888887766789999976 65321 1 1 3444 4444431 356776655543
Q ss_pred c-HHHHHHHHhC-CCCeEEEeccc
Q psy7344 204 K-RGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 204 ~-~~~~~~~l~~-G~~~itih~R~ 225 (240)
+ ...+++.+.+ |+|.+++|.-.
T Consensus 64 ~~~~~~~~~~~~~Gad~v~v~~~~ 87 (211)
T 3f4w_A 64 DGGHFESQLLFDAGADYVTVLGVT 87 (211)
T ss_dssp SCHHHHHHHHHHTTCSEEEEETTS
T ss_pred cchHHHHHHHHhcCCCEEEEeCCC
Confidence 3 3345888888 99999999865
No 142
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=91.92 E-value=0.57 Score=41.84 Aligned_cols=105 Identities=12% Similarity=0.017 Sum_probs=58.1
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecC-CCchhh-h--hccc--------ccccccCCH
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINI-GCPQMV-A--KRGH--------YGAYLQDDW 167 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~-gCP~~~-~--~~~g--------~G~~l~~~p 167 (240)
++.|+.++..+ ..||+++..|++. +...+.+..+.|+|+|++.- |-.... . .+.. .+. ...+|
T Consensus 176 ~~~i~~i~~~~---~vPVivK~vG~g~-s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~-~~~~~ 250 (368)
T 3vkj_A 176 LEKLRDISKEL---SVPIIVKESGNGI-SMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAK-NFLDW 250 (368)
T ss_dssp HHHHHHHHTTC---SSCEEEECSSSCC-CHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHH-HTTTC
T ss_pred HHHHHHHHHHc---CCCEEEEeCCCCC-CHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhcc-ccccc
Confidence 44555555443 5799999654332 12233334455999999832 211000 0 0000 001 12222
Q ss_pred -----HHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEecc
Q psy7344 168 -----PLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGK 224 (240)
Q Consensus 168 -----~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R 224 (240)
..+.++.+++ .++||.+-..+.+..+.++++..||+++.+ ||
T Consensus 251 g~pt~~~l~~v~~~~--------------~~ipvia~GGI~~~~d~~kal~lGA~~v~i-g~ 297 (368)
T 3vkj_A 251 GVPTAASIMEVRYSV--------------PDSFLVGSGGIRSGLDAAKAIALGADIAGM-AL 297 (368)
T ss_dssp SCBHHHHHHHHHHHS--------------TTCEEEEESSCCSHHHHHHHHHHTCSEEEE-CH
T ss_pred cccHHHHHHHHHHHc--------------CCCcEEEECCCCCHHHHHHHHHcCCCEEEE-cH
Confidence 3444444332 246888877788888899888889999998 66
No 143
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=91.89 E-value=0.36 Score=42.66 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=58.4
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+.+++++++.+.++.+ +.|++.|.|+.|. +++...++++++++++ +.+
T Consensus 131 v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~---------g~~ 185 (369)
T 2p8b_A 131 FPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT----------------NVKEDVKRIEAVRERV---------GND 185 (369)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHH---------CTT
T ss_pred eeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHh---------CCC
Confidence 4555566667898887766655 6689999998772 4566667788887762 135
Q ss_pred eeeEEeee----hhcHH-HHHHHHhC-CCCeEE
Q psy7344 194 INIGCPQM----VAKRG-HYGAYLQD-DWPLLT 220 (240)
Q Consensus 194 ~pvsvK~r----~~~~~-~~~~~l~~-G~~~it 220 (240)
+++.++.. .++.. ++++.|++ |+++|-
T Consensus 186 ~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iE 218 (369)
T 2p8b_A 186 IAIRVDVNQGWKNSANTLTALRSLGHLNIDWIE 218 (369)
T ss_dssp SEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEE
Confidence 67777665 35677 89999999 999873
No 144
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=91.88 E-value=0.14 Score=47.61 Aligned_cols=78 Identities=9% Similarity=0.004 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhc
Q psy7344 125 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAK 204 (240)
Q Consensus 125 d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~ 204 (240)
..+....+.++++.|+|.|.||..||+ ...+.++++.+++.. .++||.+..- .
T Consensus 229 ~~d~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~i~~ir~~~----------p~~~Vi~g~v--~ 281 (496)
T 4fxs_A 229 APGNEERVKALVEAGVDVLLIDSSHGH---------------SEGVLQRIRETRAAY----------PHLEIIGGNV--A 281 (496)
T ss_dssp SSCCHHHHHHHHHTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHC----------TTCCEEEEEE--C
T ss_pred ccchHHHHHHHHhccCceEEecccccc---------------chHHHHHHHHHHHHC----------CCceEEEccc--C
Confidence 344445555566779999999999752 234446666666651 2568877432 2
Q ss_pred HHHHHHHHhC-CCCeEEE------eccccccc
Q psy7344 205 RGHYGAYLQD-DWPLLTE------LGKMAMLV 229 (240)
Q Consensus 205 ~~~~~~~l~~-G~~~iti------h~R~~~~~ 229 (240)
+.+.++.+.+ |+|+|.+ |+.|+...
T Consensus 282 t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~ 313 (496)
T 4fxs_A 282 TAEGARALIEAGVSAVKVGIGPGSICTTRIVT 313 (496)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHH
T ss_pred cHHHHHHHHHhCCCEEEECCCCCcCccccccc
Confidence 3467888899 9999998 56665543
No 145
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=91.48 E-value=0.63 Score=41.59 Aligned_cols=106 Identities=12% Similarity=-0.046 Sum_probs=62.2
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHh-
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSP- 177 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~- 177 (240)
+|+.+.++.... ..|+++. ...++ .++.++++.|+|+|.++.|- +....-.+.| ...++.+.++.++.
T Consensus 199 ~~~~i~~l~~~~---~~pvi~g-gi~t~---e~a~~~~~~Gad~i~vg~Gg-~~~~~~~~~g---~~~~~~l~~v~~~~~ 267 (393)
T 2qr6_A 199 EALNLKEFIGSL---DVPVIAG-GVNDY---TTALHMMRTGAVGIIVGGGE-NTNSLALGME---VSMATAIADVAAARR 267 (393)
T ss_dssp ---CHHHHHHHC---SSCEEEE-CCCSH---HHHHHHHTTTCSEEEESCCS-CCHHHHTSCC---CCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhc---CCCEEEC-CcCCH---HHHHHHHHcCCCEEEECCCc-ccccccCCCC---CChHHHHHHHHHHHH
Confidence 455566665543 4788773 11233 34555556799999997762 2100001111 35677777777662
Q ss_pred ---hhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 178 ---NMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 178 ---~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
.+. + +.++||.+-..+.+..+.++++..||+++.+ ||.
T Consensus 268 ~~~~~~------~---~~~ipvia~GGI~~~~dv~kalalGA~~V~i-G~~ 308 (393)
T 2qr6_A 268 DYLDET------G---GRYVHIIADGSIENSGDVVKAIACGADAVVL-GSP 308 (393)
T ss_dssp HHHHHH------T---SCCCEEEECSSCCSHHHHHHHHHHTCSEEEE-CGG
T ss_pred HhHhhc------C---CcceEEEEECCCCCHHHHHHHHHcCCCEEEE-CHH
Confidence 211 0 0126777777777788888888779999999 776
No 146
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=91.42 E-value=2 Score=37.87 Aligned_cols=128 Identities=13% Similarity=0.082 Sum_probs=69.4
Q ss_pred eecccccccCCCccccccCchhhhhhhhcccceeee-CChhhHHHhhhcccCC-CCceeEEeecCCHHHHHHHHHHHcc-
Q psy7344 62 FMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQ-DDWPLLTELGFKTRSH-MCGHSLMFCGNDSKNLTEAAKLAEP- 138 (240)
Q Consensus 62 ~vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga~l~-~d~eli~~i~~~~~~~-~~pvivqi~g~d~~~~~~aa~~le~- 138 (240)
.++.+.+.+||....+..+ ...++..|+.|.... ...+........ .+. ..++.+.+ +.+.+....+..+++.
T Consensus 55 ~l~~PIi~ApM~~~~~~~l--A~Ava~~Gglg~i~~~~s~e~~~~~i~~-~p~~l~~v~~~~-g~~~~~~~~~~~l~~~~ 130 (351)
T 2c6q_A 55 YSGVPIIAANMDTVGTFEM--AKVLCKFSLFTAVHKHYSLVQWQEFAGQ-NPDCLEHLAASS-GTGSSDFEQLEQILEAI 130 (351)
T ss_dssp EEECCEEECSSTTTSCHHH--HHHHHHTTCEEECCTTCCHHHHHHHHHH-CGGGCTTEEEEE-CSSHHHHHHHHHHHHHC
T ss_pred cccCCEEECCCCCCCcHHH--HHHHHHCCCEEEEcCCCCHHHHHHHHhh-CchhhheeEeec-CCChHHHHHHHHHHhcc
Confidence 3555678889987665444 244555554333221 112222221111 111 12355554 3345555555556664
Q ss_pred -CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC-CeeeEEeeehhcHHHHHHHHhC-C
Q psy7344 139 -HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN-DINIGCPQMVAKRGHYGAYLQD-D 215 (240)
Q Consensus 139 -~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~-~~pvsvK~r~~~~~~~~~~l~~-G 215 (240)
+++.|.+... . | ++..+.+.++++++. . ++||.+|.-. +.+.++.+.+ |
T Consensus 131 ~g~~~i~i~~~--------~--g-----~~~~~~~~i~~lr~~-----------~~~~~vi~g~v~--t~e~A~~a~~aG 182 (351)
T 2c6q_A 131 PQVKYICLDVA--------N--G-----YSEHFVEFVKDVRKR-----------FPQHTIMAGNVV--TGEMVEELILSG 182 (351)
T ss_dssp TTCCEEEEECS--------C--T-----TBHHHHHHHHHHHHH-----------CTTSEEEEEEEC--SHHHHHHHHHTT
T ss_pred CCCCEEEEEec--------C--C-----CcHHHHHHHHHHHHh-----------cCCCeEEEEeCC--CHHHHHHHHHhC
Confidence 7888766432 0 1 333444666676666 4 6788877432 3567788888 9
Q ss_pred CCeEEE
Q psy7344 216 WPLLTE 221 (240)
Q Consensus 216 ~~~iti 221 (240)
+|+|.+
T Consensus 183 aD~I~v 188 (351)
T 2c6q_A 183 ADIIKV 188 (351)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999977
No 147
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=91.40 E-value=0.95 Score=40.10 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=58.7
Q ss_pred CCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-
Q psy7344 124 NDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM- 201 (240)
Q Consensus 124 ~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r- 201 (240)
.+++++.+.++.+ +.|+++|.|..|++. ++ .+.+++...++++++++++ +.++++.++..
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~-------~~--~~~~~~~~~e~v~avr~a~---------g~d~~l~vDan~ 209 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP-------VS--WAPDVKMDLKACAAVREAV---------GPDIRLMIDAFH 209 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT-------ST--TCCCHHHHHHHHHHHHHHH---------CTTSEEEEECCT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-------cc--cccchHHHHHHHHHHHHHh---------CCCCeEEEECCC
Confidence 5788887776655 569999999999742 12 3458888888999998873 13677777765
Q ss_pred ---hhcHHHHHHHHhC-CCCeE
Q psy7344 202 ---VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 ---~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 210 ~~~~~~a~~~~~~l~~~~i~~i 231 (382)
T 1rvk_A 210 WYSRTDALALGRGLEKLGFDWI 231 (382)
T ss_dssp TCCHHHHHHHHHHHHTTTCSEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEE
Confidence 3567889999999 99987
No 148
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=91.21 E-value=1.1 Score=36.42 Aligned_cols=85 Identities=9% Similarity=0.006 Sum_probs=53.4
Q ss_pred ceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 116 GHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++++.+--.+.++..+.++.++.++|.+++++ |.... . | ++.++++ ++.. .+..++
T Consensus 8 ~lilalD~~~~~~~~~~~~~~~~~vd~ie~g~--~~~~~--~--G------~~~i~~l----r~~~--------~~~~i~ 63 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNVASYVDVIEVGT--ILAFA--E--G------MKAVSTL----RHNH--------PNHILV 63 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHHGGGCSEEEECH--HHHHH--H--T------THHHHHH----HHHC--------TTSEEE
T ss_pred CeEEEeCCCCHHHHHHHHHHhcCCceEEEeCc--HHHHh--c--C------HHHHHHH----HHhC--------CCCcEE
Confidence 35665545678888888887766899999875 22211 1 1 3444444 4331 002455
Q ss_pred eEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 196 IGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+-+|+. +....+++.+.+ |+|.|++|+=.
T Consensus 64 ld~~l~-d~p~~~~~~~~~aGad~i~vh~~~ 93 (218)
T 3jr2_A 64 CDMKTT-DGGAILSRMAFEAGADWITVSAAA 93 (218)
T ss_dssp EEEEEC-SCHHHHHHHHHHHTCSEEEEETTS
T ss_pred EEEeec-ccHHHHHHHHHhcCCCEEEEecCC
Confidence 667776 334457788889 99999999754
No 149
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=91.16 E-value=0.38 Score=40.04 Aligned_cols=100 Identities=9% Similarity=-0.028 Sum_probs=60.5
Q ss_pred eCChhhHHHhhhcccCCCCceeEEee---cC-CH---HHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHH
Q psy7344 97 QDDWPLLTELGFKTRSHMCGHSLMFC---GN-DS---KNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPL 169 (240)
Q Consensus 97 ~~d~eli~~i~~~~~~~~~pvivqi~---g~-d~---~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~ 169 (240)
...++.|+++...+ +.|++.... ++ +. .++.++.+.++.|+|.|-++..+ ..+|+.
T Consensus 55 ~~~~~~i~~ir~~v---~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~--------------~~~p~~ 117 (229)
T 3q58_A 55 IEGIENLRTVRPHL---SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASF--------------RSRPVD 117 (229)
T ss_dssp EESHHHHHHHGGGC---CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCS--------------SCCSSC
T ss_pred ECCHHHHHHHHHhc---CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccc--------------cCChHH
Confidence 34577788877654 478763321 11 11 12334444556699999887662 235566
Q ss_pred HHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEE--Eecccccc
Q psy7344 170 LTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLT--ELGKMAML 228 (240)
Q Consensus 170 i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~it--ih~R~~~~ 228 (240)
+.++++.+++. .+++.+.. .+.+.++.+++ |+|.|. +||+|...
T Consensus 118 l~~~i~~~~~~------------g~~v~~~v---~t~eea~~a~~~Gad~Ig~~~~g~t~~~ 164 (229)
T 3q58_A 118 IDSLLTRIRLH------------GLLAMADC---STVNEGISCHQKGIEFIGTTLSGYTGPI 164 (229)
T ss_dssp HHHHHHHHHHT------------TCEEEEEC---SSHHHHHHHHHTTCSEEECTTTTSSSSC
T ss_pred HHHHHHHHHHC------------CCEEEEec---CCHHHHHHHHhCCCCEEEecCccCCCCC
Confidence 77777777653 44565543 34556677778 999994 57777654
No 150
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=91.09 E-value=1.4 Score=38.04 Aligned_cols=101 Identities=9% Similarity=-0.127 Sum_probs=64.3
Q ss_pred CCceeEEee-c-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFC-G-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~-g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
+.|+++-+- | +++++..+.++.+++ |+.+|.|-=+-..+.. ++.... +.+.+...+-+++++++- +
T Consensus 82 ~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrc--gh~~gk-l~~~~e~~~~I~aa~~a~--~------ 150 (287)
T 3b8i_A 82 RLPVIADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQF--GRKSTD-LICVEEGVGKIRAALEAR--V------ 150 (287)
T ss_dssp SSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCT--TTCTTC-BCCHHHHHHHHHHHHHHC--C------
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCcccc--CCCCCC-ccCHHHHHHHHHHHHHcC--C------
Confidence 568888763 2 488888887777765 8999998766322221 222233 566666656666666541 0
Q ss_pred CCCeeeEEeee-----hhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 191 GNDINIGCPQM-----VAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 191 ~~~~pvsvK~r-----~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+.++-|..+.. ++.+++-++++++ |||.|.+++-.
T Consensus 151 ~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~~~ 191 (287)
T 3b8i_A 151 DPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGVR 191 (287)
T ss_dssp STTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred CCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEEecCCC
Confidence 12344444443 2467788888999 99999999865
No 151
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=90.99 E-value=0.79 Score=40.45 Aligned_cols=80 Identities=10% Similarity=0.056 Sum_probs=54.2
Q ss_pred ceeEEeecCCHHHHHHHHHH-Hc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 116 GHSLMFCGNDSKNLTEAAKL-AE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~-le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
|+...+..++++++.+.++. ++ .|++.|.|+.|++ +++...++++++++++ +.+
T Consensus 133 ~~~~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~---------g~~ 188 (370)
T 1nu5_A 133 PIAWTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAV---------GDR 188 (370)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHH---------GGG
T ss_pred EeeEEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhc---------CCC
Confidence 44434445688888776655 46 7899999998863 3444456677777652 124
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+++.++.. .++..++++.|++ |+++|
T Consensus 189 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 219 (370)
T 1nu5_A 189 ASVRVDVNQGWDEQTASIWIPRLEEAGVELV 219 (370)
T ss_dssp CEEEEECTTCCCHHHHHHHHHHHHHHTCCEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCcceE
Confidence 56666554 3567889999999 99987
No 152
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=90.96 E-value=1 Score=39.79 Aligned_cols=79 Identities=9% Similarity=-0.042 Sum_probs=58.1
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+.+++++++.+.++.+ +.|++.|.|+.|. +++...++++++++++ +.+
T Consensus 136 vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~---------g~~ 190 (371)
T 2ps2_A 136 LPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG----------------EPVTDAKRITAALANQ---------QPD 190 (371)
T ss_dssp EEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS----------------CHHHHHHHHHHHTTTC---------CTT
T ss_pred eEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC----------------CHHHHHHHHHHHHHhc---------CCC
Confidence 5666666667899888776665 6689999998772 4666678888888862 135
Q ss_pred eeeEEeee----hhcHHHHHHHH-hC-CCCeE
Q psy7344 194 INIGCPQM----VAKRGHYGAYL-QD-DWPLL 219 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l-~~-G~~~i 219 (240)
+++.++.. .++..++++.| ++ |+ +|
T Consensus 191 ~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~i 221 (371)
T 2ps2_A 191 EFFIVDANGKLSVETALRLLRLLPHGLDF-AL 221 (371)
T ss_dssp CEEEEECTTBCCHHHHHHHHHHSCTTCCC-EE
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHhhcCC-cC
Confidence 67777665 35678899999 88 98 65
No 153
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=90.79 E-value=0.39 Score=39.10 Aligned_cols=75 Identities=12% Similarity=-0.027 Sum_probs=48.4
Q ss_pred eeEEeecC----CHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 117 HSLMFCGN----DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 117 vivqi~g~----d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
|++|..++ +.+.+.+.++.+++ |++++.++ .++.++++.+.
T Consensus 9 ~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~-------------------~~~~i~~i~~~--------------- 54 (223)
T 1y0e_A 9 VSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN-------------------TKEDILAIKET--------------- 54 (223)
T ss_dssp EECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE-------------------SHHHHHHHHHH---------------
T ss_pred EEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC-------------------CHHHHHHHHHh---------------
Confidence 45566666 77888888888866 78888653 34555555543
Q ss_pred CCeeeEEeee---------hhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 192 NDINIGCPQM---------VAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 192 ~~~pvsvK~r---------~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+++|+....+ +....+.++.+.+ |+|.+++|...
T Consensus 55 ~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~ 98 (223)
T 1y0e_A 55 VDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATL 98 (223)
T ss_dssp CCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSC
T ss_pred cCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeec
Confidence 4556632111 2234556666777 99999999754
No 154
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=90.70 E-value=1.5 Score=38.16 Aligned_cols=102 Identities=9% Similarity=-0.142 Sum_probs=59.4
Q ss_pred CCceeEEee-c-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFC-G-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~-g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
+.|+++-+- | +++....+.++.+++ |+.+|.|-=....+...|. .|..+..-.+.+.+|..+.... ..
T Consensus 80 ~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~-~gk~l~~~~e~~~rI~Aa~~A~-~~------- 150 (302)
T 3fa4_A 80 STPVIADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHL-AGKILVDTDTYVTRIRAAVQAR-QR------- 150 (302)
T ss_dssp TSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC--------CCCBCCHHHHHHHHHHHHHHH-HH-------
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCC-CCCeecCHHHHHHHHHHHHHHH-Hh-------
Confidence 578888873 3 478887888887755 8999988655322211111 2334444344555554443322 00
Q ss_pred CCCeeeEEeee--------hhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 191 GNDINIGCPQM--------VAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 191 ~~~~pvsvK~r--------~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.+.++.+--| ++++++-+++..+ |+|.|-+|+-+
T Consensus 151 -~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~ 193 (302)
T 3fa4_A 151 -IGSDIVVIARTDSLQTHGYEESVARLRAARDAGADVGFLEGIT 193 (302)
T ss_dssp -HTCCCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTCC
T ss_pred -cCCCEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCCC
Confidence 0224444444 3557778888899 99999999854
No 155
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=90.61 E-value=0.29 Score=45.33 Aligned_cols=78 Identities=8% Similarity=0.017 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehh
Q psy7344 124 NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVA 203 (240)
Q Consensus 124 ~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~ 203 (240)
...+....+.++++.++|.|.|+.+|++ +..+.++++.+++.. .++||.++.-
T Consensus 226 ~~~~~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~----------p~~~Vi~g~v-- 278 (490)
T 4avf_A 226 TGADTGERVAALVAAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTF----------PDVQVIGGNI-- 278 (490)
T ss_dssp SSTTHHHHHHHHHHTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHC----------TTSEEEEEEE--
T ss_pred cccchHHHHHHHhhcccceEEecccCCc---------------chhHHHHHHHHHHHC----------CCceEEEeee--
Confidence 3444555555566779999999988643 234446666666651 2568877532
Q ss_pred cHHHHHHHHhC-CCCeEEE------ecccccc
Q psy7344 204 KRGHYGAYLQD-DWPLLTE------LGKMAML 228 (240)
Q Consensus 204 ~~~~~~~~l~~-G~~~iti------h~R~~~~ 228 (240)
.+.+.++.+++ |+|+|.+ |..|+..
T Consensus 279 ~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~ 310 (490)
T 4avf_A 279 ATAEAAKALAEAGADAVKVGIGPGSICTTRIV 310 (490)
T ss_dssp CSHHHHHHHHHTTCSEEEECSSCSTTCHHHHH
T ss_pred CcHHHHHHHHHcCCCEEEECCCCCcCCCcccc
Confidence 23467888888 9999998 5555544
No 156
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.61 E-value=0.63 Score=43.18 Aligned_cols=77 Identities=16% Similarity=0.144 Sum_probs=50.6
Q ss_pred HHHccCCCEEEecCCCchh-hhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHH
Q psy7344 134 KLAEPHCDGIDINIGCPQM-VAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYL 212 (240)
Q Consensus 134 ~~le~~~d~Idin~gCP~~-~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l 212 (240)
.+++.|+|+|.++.| |-. ...+...|. -..++..+.++.+++++ .++||.+-..+.+..++++++
T Consensus 288 ~l~~aGaD~I~Vg~g-~Gs~~~tr~~~g~-g~p~~~~i~~v~~~~~~------------~~iPVIa~GGI~~~~di~kal 353 (496)
T 4fxs_A 288 ALIEAGVSAVKVGIG-PGSICTTRIVTGV-GVPQITAIADAAGVANE------------YGIPVIADGGIRFSGDISKAI 353 (496)
T ss_dssp HHHHHTCSEEEECSS-CCTTBCHHHHHCC-CCCHHHHHHHHHHHHGG------------GTCCEEEESCCCSHHHHHHHH
T ss_pred HHHHhCCCEEEECCC-CCcCcccccccCC-CccHHHHHHHHHHHhcc------------CCCeEEEeCCCCCHHHHHHHH
Confidence 334459999998754 211 111111111 13578888888887654 356888877777888898888
Q ss_pred hCCCCeEEEeccc
Q psy7344 213 QDDWPLLTELGKM 225 (240)
Q Consensus 213 ~~G~~~itih~R~ 225 (240)
..|||++.+ ||.
T Consensus 354 a~GAd~V~i-Gs~ 365 (496)
T 4fxs_A 354 AAGASCVMV-GSM 365 (496)
T ss_dssp HTTCSEEEE-STT
T ss_pred HcCCCeEEe-cHH
Confidence 779999998 553
No 157
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=90.39 E-value=0.71 Score=40.04 Aligned_cols=69 Identities=19% Similarity=0.080 Sum_probs=45.2
Q ss_pred HHHHHHcc-CCCEEEec--CCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHH
Q psy7344 131 EAAKLAEP-HCDGIDIN--IGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGH 207 (240)
Q Consensus 131 ~aa~~le~-~~d~Idin--~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~ 207 (240)
+.|+..++ |++.|.+- ..|... ..+| ...+.+++.++++.+. +++||.+|.++.. .+
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~--~~~g--~~R~~~~~~i~~i~~~---------------v~iPvl~k~~i~~-id 91 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELR--NTDG--VARSVDPLKIEEIRKC---------------ISINVLAKVRIGH-FV 91 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-------CCC--CCCCCCHHHHHHHHTT---------------CCSEEEEEEETTC-HH
T ss_pred HHHHHHHHcCCCEEEEecCCCCcch--hcCC--cccCCCHHHHHHHHHh---------------cCCCEEEeccCCc-HH
Confidence 44666665 78888754 444433 2222 1235688888776653 6889999998655 67
Q ss_pred HHHHHhC-CCCeE
Q psy7344 208 YGAYLQD-DWPLL 219 (240)
Q Consensus 208 ~~~~l~~-G~~~i 219 (240)
.++.+++ |||.|
T Consensus 92 e~qil~aaGAD~I 104 (297)
T 4adt_A 92 EAQILEELKVDML 104 (297)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEE
Confidence 7888888 99999
No 158
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=89.93 E-value=1.8 Score=37.64 Aligned_cols=102 Identities=6% Similarity=-0.202 Sum_probs=58.0
Q ss_pred CceeEEee-c-CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 115 CGHSLMFC-G-NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 115 ~pvivqi~-g-~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
.|+++-+- | ++++...+.++.+++ |+.+|.|-=.-..+..-|- .|..|..-.+.+.+|..+.... ..
T Consensus 89 ~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~-~gk~l~~~~e~~~rI~Aa~~A~-~~-------- 158 (307)
T 3lye_A 89 PPLIADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHL-SGKKVVSRDEYLVRIRAAVATK-RR-------- 158 (307)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC---------CBCCHHHHHHHHHHHHHHH-HH--------
T ss_pred CcEEEECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCC-CCCeecCHHHHHHHHHHHHHHH-Hh--------
Confidence 78888772 2 478887888887754 8999988655322221111 1333433344444544433221 00
Q ss_pred CCeeeEEeee--------hhcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 192 NDINIGCPQM--------VAKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 192 ~~~pvsvK~r--------~~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
.+.++.+.-| ++++++-++++.+ |||.|-+|+.+.
T Consensus 159 ~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~ 202 (307)
T 3lye_A 159 LRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEGFRS 202 (307)
T ss_dssp TTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCCSC
T ss_pred cCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCCCC
Confidence 1234445555 2456777788888 999999998654
No 159
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=89.92 E-value=0.77 Score=39.10 Aligned_cols=68 Identities=7% Similarity=-0.099 Sum_probs=48.0
Q ss_pred HHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHH
Q psy7344 132 AAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGA 210 (240)
Q Consensus 132 aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~ 210 (240)
.++++++ |++.||- .|.|. |.|.. +.||+.++.+++. .++||.+.-.+.+..+.++
T Consensus 148 ~akrl~~~G~~aVmP-lg~pI------GsG~G-i~~~~lI~~I~e~---------------~~vPVI~eGGI~TPsDAa~ 204 (265)
T 1wv2_A 148 IARQLAEIGCIAVMP-LAGLI------GSGLG-ICNPYNLRIILEE---------------AKVPVLVDAGVGTASDAAI 204 (265)
T ss_dssp HHHHHHHSCCSEEEE-CSSST------TCCCC-CSCHHHHHHHHHH---------------CSSCBEEESCCCSHHHHHH
T ss_pred HHHHHHHhCCCEEEe-CCccC------CCCCC-cCCHHHHHHHHhc---------------CCCCEEEeCCCCCHHHHHH
Confidence 4555544 7888854 34342 23332 3689999887764 5679999888888888888
Q ss_pred HHhCCCCeEEEe
Q psy7344 211 YLQDDWPLLTEL 222 (240)
Q Consensus 211 ~l~~G~~~itih 222 (240)
+++.|+|++.+-
T Consensus 205 AmeLGAdgVlVg 216 (265)
T 1wv2_A 205 AMELGCEAVLMN 216 (265)
T ss_dssp HHHHTCSEEEES
T ss_pred HHHcCCCEEEEC
Confidence 888899999874
No 160
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=89.84 E-value=0.53 Score=39.20 Aligned_cols=100 Identities=9% Similarity=-0.104 Sum_probs=60.4
Q ss_pred eCChhhHHHhhhcccCCCCceeEEee---cC-CH---HHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHH
Q psy7344 97 QDDWPLLTELGFKTRSHMCGHSLMFC---GN-DS---KNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPL 169 (240)
Q Consensus 97 ~~d~eli~~i~~~~~~~~~pvivqi~---g~-d~---~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~ 169 (240)
...++.|+++...+ +.|++.... ++ +. .++.++.+.++.|+|.|-++... ..+|+.
T Consensus 55 ~~~~~~i~~ir~~v---~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~--------------~~~p~~ 117 (232)
T 3igs_A 55 IEGIDNLRMTRSLV---SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTA--------------RQRPVA 117 (232)
T ss_dssp EESHHHHHHHHTTC---CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCS--------------SCCSSC
T ss_pred ECCHHHHHHHHHhc---CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccc--------------cCCHHH
Confidence 34577788876654 478753321 11 11 12334444556699999887662 235667
Q ss_pred HHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEE--Eecccccc
Q psy7344 170 LTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLT--ELGKMAML 228 (240)
Q Consensus 170 i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~it--ih~R~~~~ 228 (240)
+.++++.+++. .+++.+.. .+.+.++.+++ |+|.|. +|++|...
T Consensus 118 l~~~i~~~~~~------------g~~v~~~v---~t~eea~~a~~~Gad~Ig~~~~g~t~~~ 164 (232)
T 3igs_A 118 VEALLARIHHH------------HLLTMADC---SSVDDGLACQRLGADIIGTTMSGYTTPD 164 (232)
T ss_dssp HHHHHHHHHHT------------TCEEEEEC---CSHHHHHHHHHTTCSEEECTTTTSSSSS
T ss_pred HHHHHHHHHHC------------CCEEEEeC---CCHHHHHHHHhCCCCEEEEcCccCCCCC
Confidence 77788777653 44565543 34566777778 999995 56766544
No 161
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.74 E-value=1.6 Score=37.51 Aligned_cols=79 Identities=10% Similarity=-0.046 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+=+-
T Consensus 22 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-gr~pviaGvg~~ 82 (294)
T 3b4u_A 22 DIDAMIAHARRCLSNGCDSVTLFGT----------TGEGCSVGSRERQAILSSFIAAG--------I-APSRIVTGVLVD 82 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHTT--------C-CGGGEEEEECCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCCc
Confidence 667777777766 458999887433 44444446666667777776651 1 2678887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 83 ~t~~ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 83 SIEDAADQSAEALNAGARNILLA 105 (294)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCEEEEc
Confidence 5677899999999 99999884
No 162
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=89.74 E-value=0.65 Score=41.68 Aligned_cols=91 Identities=13% Similarity=0.038 Sum_probs=53.0
Q ss_pred CCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchh--hh-hcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQM--VA-KRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~--~~-~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
+.|+++. ...++ .++.+..+.|+|+|.++.+ |-. .+ ...+.| ..+++.+.++.+.+..
T Consensus 194 ~~pviv~-~v~~~---~~a~~a~~~Gad~I~vg~~-~G~~~~~~~~~~~g---~p~~~~l~~v~~~~~~----------- 254 (404)
T 1eep_A 194 NLDLIAG-NIVTK---EAALDLISVGADCLKVGIG-PGSICTTRIVAGVG---VPQITAICDVYEACNN----------- 254 (404)
T ss_dssp TCEEEEE-EECSH---HHHHHHHTTTCSEEEECSS-CSTTSHHHHHHCCC---CCHHHHHHHHHHHHTT-----------
T ss_pred CCeEEEc-CCCcH---HHHHHHHhcCCCEEEECCC-CCcCcCccccCCCC---cchHHHHHHHHHHHhh-----------
Confidence 4677652 11333 2333344568999999543 111 00 011112 2355666666654332
Q ss_pred CCCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 191 GNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 191 ~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
.++||.+-..+.+..+.++++..|||++.+ ||-
T Consensus 255 -~~ipVia~GGI~~~~d~~~ala~GAd~V~i-G~~ 287 (404)
T 1eep_A 255 -TNICIIADGGIRFSGDVVKAIAAGADSVMI-GNL 287 (404)
T ss_dssp -SSCEEEEESCCCSHHHHHHHHHHTCSEEEE-CHH
T ss_pred -cCceEEEECCCCCHHHHHHHHHcCCCHHhh-CHH
Confidence 467888877777778888888779999998 554
No 163
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.67 E-value=0.79 Score=42.40 Aligned_cols=78 Identities=15% Similarity=0.174 Sum_probs=51.0
Q ss_pred HHHHHHccCCCEEEecCCCchhhhhc--ccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHH
Q psy7344 131 EAAKLAEPHCDGIDINIGCPQMVAKR--GHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHY 208 (240)
Q Consensus 131 ~aa~~le~~~d~Idin~gCP~~~~~~--~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~ 208 (240)
.+.++.+.|+|+|-++.|--.....+ .+.| ..+++.+.++.+++++ .++||.+-..+.+..++
T Consensus 283 ~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g---~p~~~~l~~v~~~~~~------------~~iPVIa~GGI~~~~di 347 (490)
T 4avf_A 283 AAKALAEAGADAVKVGIGPGSICTTRIVAGVG---VPQISAIANVAAALEG------------TGVPLIADGGIRFSGDL 347 (490)
T ss_dssp HHHHHHHTTCSEEEECSSCSTTCHHHHHTCBC---CCHHHHHHHHHHHHTT------------TTCCEEEESCCCSHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCcCCCccccCCCC---ccHHHHHHHHHHHhcc------------CCCcEEEeCCCCCHHHH
Confidence 34444456999999965511111111 1222 3577888888877654 35788887777778888
Q ss_pred HHHHhCCCCeEEEecc
Q psy7344 209 GAYLQDDWPLLTELGK 224 (240)
Q Consensus 209 ~~~l~~G~~~itih~R 224 (240)
++++..||+++.+ |+
T Consensus 348 ~kal~~GAd~V~v-Gs 362 (490)
T 4avf_A 348 AKAMVAGAYCVMM-GS 362 (490)
T ss_dssp HHHHHHTCSEEEE-CT
T ss_pred HHHHHcCCCeeee-cH
Confidence 8888669999998 54
No 164
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=89.66 E-value=0.69 Score=43.39 Aligned_cols=87 Identities=13% Similarity=0.050 Sum_probs=59.7
Q ss_pred cCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh
Q psy7344 123 GNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV 202 (240)
Q Consensus 123 g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~ 202 (240)
++++.+...+..+++.|+|+|-++.|.-+..+.+.-.|-.. .....+.++.++.++ ..+||.+-..+
T Consensus 327 aGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~-PQ~tAi~~~a~~a~~------------~~vpvIADGGI 393 (556)
T 4af0_A 327 AGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGR-PQGTAVYAVAEFASR------------FGIPCIADGGI 393 (556)
T ss_dssp EEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCC-CHHHHHHHHHHHHGG------------GTCCEEEESCC
T ss_pred eccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCC-cHHHHHHHHHHHHHH------------cCCCEEecCCc
Confidence 34555554455555679999999999555555554444322 344455555555444 46789888888
Q ss_pred hcHHHHHHHHhCCCCeEEEe
Q psy7344 203 AKRGHYGAYLQDDWPLLTEL 222 (240)
Q Consensus 203 ~~~~~~~~~l~~G~~~itih 222 (240)
...-+++++|..|||.+.+-
T Consensus 394 ~~sGDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 394 GNIGHIAKALALGASAVMMG 413 (556)
T ss_dssp CSHHHHHHHHHTTCSEEEES
T ss_pred CcchHHHHHhhcCCCEEEEc
Confidence 88899999999999999983
No 165
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=89.63 E-value=0.95 Score=38.23 Aligned_cols=94 Identities=12% Similarity=-0.034 Sum_probs=55.9
Q ss_pred eeEEeecC--CHHHHHHHHHHHcc-CCCEEEecCCC--ch---hhhhcccccccc--cCCHHHHHHHHHHhhhccccccC
Q psy7344 117 HSLMFCGN--DSKNLTEAAKLAEP-HCDGIDINIGC--PQ---MVAKRGHYGAYL--QDDWPLLTNLVYSPNMVHFVIAE 186 (240)
Q Consensus 117 vivqi~g~--d~~~~~~aa~~le~-~~d~Idin~gC--P~---~~~~~~g~G~~l--~~~p~~i~~iv~~~~~~~~~i~~ 186 (240)
++.-|..+ +.+.+.+.++.+++ |+|+|+|+.=- |. +...+.. -.+| .-+.+.+-++++.+++.
T Consensus 19 ~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~-~~al~~G~~~~~~~~~v~~ir~~------ 91 (262)
T 2ekc_A 19 LVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAH-EVALKNGIRFEDVLELSETLRKE------ 91 (262)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHH------
T ss_pred EEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHH-HHHHHcCCCHHHHHHHHHHHHhh------
Confidence 44444444 55678888888866 79999996521 11 0000000 0000 12445556777777776
Q ss_pred CCCCCC-CeeeEEeee-hh-----cHHHHHHHHhC-CCCeEEEec
Q psy7344 187 PHCDGN-DINIGCPQM-VA-----KRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 187 ~~~~~~-~~pvsvK~r-~~-----~~~~~~~~l~~-G~~~itih~ 223 (240)
. ++|+.+ +. ++ .+..+++.+.+ |+|++.++.
T Consensus 92 -----~~~~Pi~~-m~y~n~v~~~g~~~f~~~~~~aG~dgvii~d 130 (262)
T 2ekc_A 92 -----FPDIPFLL-MTYYNPIFRIGLEKFCRLSREKGIDGFIVPD 130 (262)
T ss_dssp -----CTTSCEEE-ECCHHHHHHHCHHHHHHHHHHTTCCEEECTT
T ss_pred -----cCCCCEEE-EecCcHHHHhhHHHHHHHHHHcCCCEEEECC
Confidence 4 678877 32 22 23678888888 999998864
No 166
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=89.52 E-value=1.4 Score=38.07 Aligned_cols=79 Identities=11% Similarity=-0.013 Sum_probs=56.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+.
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~Gt----------tGE~~~Lt~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 94 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGT----------TGESPTTTDGEKIELLRAVLEAV--------G-DRARVIAGAGTY 94 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TTSEEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHh--------C-CCCeEEEeCCCC
Confidence 677777877776 458999977443 34444445666667777766641 1 2678888775
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 95 ~t~~ai~la~~a~~~Gadavlv~ 117 (304)
T 3l21_A 95 DTAHSIRLAKACAAEGAHGLLVV 117 (304)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC
Confidence 5678899999999 99999884
No 167
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=89.39 E-value=1.4 Score=37.97 Aligned_cols=79 Identities=9% Similarity=-0.096 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~~--------~-grvpViaGvg~~ 91 (301)
T 1xky_A 31 DFAKTTKLVNYLIDNGTTAIVVGGT----------TGESPTLTSEEKVALYRHVVSVV--------D-KRVPVIAGTGSN 91 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCceEEeCCCCC
Confidence 667777777766 458999987433 44444446666667777766641 1 2678887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 92 ~t~~ai~la~~A~~~Gadavlv~ 114 (301)
T 1xky_A 92 NTHASIDLTKKATEVGVDAVMLV 114 (301)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEc
Confidence 5677899999999 99999884
No 168
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=89.22 E-value=1.5 Score=37.72 Aligned_cols=79 Identities=9% Similarity=-0.078 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . -++||.+-+.
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 86 (297)
T 3flu_A 26 HYEQLRDLIDWHIENGTDGIVAVGT----------TGESATLSVEEHTAVIEAVVKHV--------A-KRVPVIAGTGAN 86 (297)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------ccCcccCCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCCc
Confidence 667777777766 558999987544 34444445666667777666641 1 2578888666
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 87 ~t~~ai~la~~a~~~Gadavlv~ 109 (297)
T 3flu_A 87 NTVEAIALSQAAEKAGADYTLSV 109 (297)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC
Confidence 5678899999999 99999884
No 169
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=89.21 E-value=1.5 Score=37.78 Aligned_cols=79 Identities=10% Similarity=0.102 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+.
T Consensus 30 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~~--------~-grvpViaGvg~~ 90 (303)
T 2wkj_A 30 DKASLRRLVQFNIQQGIDGLYVGGS----------TGEAFVQSLSEREQVLEIVAEEA--------K-GKIKLIAHVGCV 90 (303)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TTSEEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECee----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEecCCC
Confidence 667777777766 558999988433 44444446666667777766641 1 2678888776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 91 ~t~~ai~la~~A~~~Gadavlv~ 113 (303)
T 2wkj_A 91 STAESQQLAASAKRYGFDAVSAV 113 (303)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHhCCCCEEEec
Confidence 4677899999999 99999884
No 170
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=89.15 E-value=1.9 Score=37.03 Aligned_cols=79 Identities=10% Similarity=-0.041 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 79 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGT----------TGESPTLTFEEHEKVIEFAVKRA--------A-GRIKVIAGTGGN 79 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSEEEEECCCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEecCCC
Confidence 777788888876 558999887433 44444445555567777666641 1 2578887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~ 102 (294)
T 2ehh_A 80 ATHEAVHLTAHAKEVGADGALVV 102 (294)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC
Confidence 4677889999999 99999884
No 171
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.05 E-value=1.6 Score=37.54 Aligned_cols=80 Identities=8% Similarity=-0.038 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ .+.++||.+=+.
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~g~rvpviaGvg~~ 87 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGT----------TGESATLTHEEHRTCIEIAVETC--------KGTKVKVLAGAGSN 87 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSST----------TTTGGGSCHHHHHHHHHHHHHHH--------TTSSCEEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------CCCCCeEEEeCCCC
Confidence 677777877776 558999977433 44444445666667777766641 112678888766
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 88 ~t~~ai~la~~a~~~Gadavlv~ 110 (301)
T 3m5v_A 88 ATHEAVGLAKFAKEHGADGILSV 110 (301)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Confidence 5678899999999 99999884
No 172
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.94 E-value=2.5 Score=36.54 Aligned_cols=79 Identities=8% Similarity=-0.098 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+. .|++||-++-. +|....-..+.-.++++.+.+.+ . .++||.+=+.
T Consensus 33 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~--------~-gr~pviaGvg~~ 93 (307)
T 3s5o_A 33 DYGKLEENLHKLGTFPFRGFVVQGS----------NGEFPFLTSSERLEVVSRVRQAM--------P-KNRLLLAGSGCE 93 (307)
T ss_dssp CHHHHHHHHHHHTTSCCSEEEESSG----------GGTGGGSCHHHHHHHHHHHHHTS--------C-TTSEEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccchhhCCHHHHHHHHHHHHHHc--------C-CCCcEEEecCCC
Confidence 6677777777764 48899877433 44444445666667777776651 1 3678887665
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 94 ~t~~ai~la~~A~~~Gadavlv~ 116 (307)
T 3s5o_A 94 STQATVEMTVSMAQVGADAAMVV 116 (307)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Confidence 5677899999999 99999884
No 173
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=88.92 E-value=1 Score=40.51 Aligned_cols=65 Identities=18% Similarity=0.258 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcc-CCCEEEecCCC---------chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 127 KNLTEAAKLAEP-HCDGIDINIGC---------PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 127 ~~~~~aa~~le~-~~d~Idin~gC---------P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
+++.++|++..+ |+|+|+|..+- |..-...-.||..+-..--.+.+|++++++++ -+-||
T Consensus 172 ~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~v----------g~d~v 241 (400)
T 4gbu_A 172 KEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAI----------GHEKV 241 (400)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHH----------CGGGE
T ss_pred HHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHc----------CCCcE
Confidence 357777777755 89999997752 22111223466655333446789999999984 23489
Q ss_pred EEeee
Q psy7344 197 GCPQM 201 (240)
Q Consensus 197 svK~r 201 (240)
.+|+.
T Consensus 242 gvRlS 246 (400)
T 4gbu_A 242 GLRLS 246 (400)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98886
No 174
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=88.84 E-value=0.49 Score=39.83 Aligned_cols=129 Identities=12% Similarity=0.035 Sum_probs=67.4
Q ss_pred cccCCCccccccCchhhhhhhhcccceeeeCChhhHHHhhhcccCCCCceeEEeecCC-----HHH---HHHHHHHHccC
Q psy7344 68 IAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELGFKTRSHMCGHSLMFCGND-----SKN---LTEAAKLAEPH 139 (240)
Q Consensus 68 ~lap~~~~~dl~~gC~~~i~~~g~~ga~l~~d~eli~~i~~~~~~~~~pvivqi~g~d-----~~~---~~~aa~~le~~ 139 (240)
.+.|+.+..++..-|.. ...++..+.+. ++..+..+.... ....|+++++..+. +.+ ...+.+.++.|
T Consensus 37 ~l~p~~~~~~~~~~~~~--~~~~g~~~i~~-~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~G 112 (273)
T 2qjg_A 37 SNGPIKGLIDIRKTVND--VAEGGANAVLL-HKGIVRHGHRGY-GKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMG 112 (273)
T ss_dssp HHCSCTTSSSHHHHHHH--HHHHTCSEEEE-CHHHHHSCCCSS-SCCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTT
T ss_pred ccCCCcchhhHHHHHHH--HHhcCCCEEEe-CHHHHHHHHHhh-cCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcC
Confidence 36777665554322111 12222223222 344444332222 12468888987654 211 23344455679
Q ss_pred CCEE--EecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-----------hhcHH
Q psy7344 140 CDGI--DINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-----------VAKRG 206 (240)
Q Consensus 140 ~d~I--din~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-----------~~~~~ 206 (240)
++.| .+|.+|+... . ..+.++++++..++ ..+|+.+..- .....
T Consensus 113 a~~v~~~l~~~~~~~~--------~---~~~~~~~v~~~~~~------------~g~~viv~~~~~G~~l~~~~~~~~~~ 169 (273)
T 2qjg_A 113 ADAVSIHVNVGSDEDW--------E---AYRDLGMIAETCEY------------WGMPLIAMMYPRGKHIQNERDPELVA 169 (273)
T ss_dssp CSEEEEEEEETSTTHH--------H---HHHHHHHHHHHHHH------------HTCCEEEEEEECSTTCSCTTCHHHHH
T ss_pred CCEEEEEEecCCCCHH--------H---HHHHHHHHHHHHHH------------cCCCEEEEeCCCCcccCCCCCHhHHH
Confidence 9999 7888865221 1 11345555555443 2446666541 12335
Q ss_pred HHHHHHhC-CCCeEEEec
Q psy7344 207 HYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 207 ~~~~~l~~-G~~~itih~ 223 (240)
+.++.+++ |+|.|.++.
T Consensus 170 ~~a~~a~~~Gad~i~~~~ 187 (273)
T 2qjg_A 170 HAARLGAELGADIVKTSY 187 (273)
T ss_dssp HHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEECC
Confidence 56688888 999999973
No 175
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=88.83 E-value=1.7 Score=38.01 Aligned_cols=79 Identities=8% Similarity=-0.049 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 53 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~ve~~--------~-grvpViaGvg~~ 113 (332)
T 2r8w_A 53 DIEAFSALIARLDAAEVDSVGILGS----------TGIYMYLTREERRRAIEAAATIL--------R-GRRTLMAGIGAL 113 (332)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSEEEEEECCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEecCCC
Confidence 667777777766 458999887433 44444446666667777766641 1 2678888776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 114 st~eai~la~~A~~~Gadavlv~ 136 (332)
T 2r8w_A 114 RTDEAVALAKDAEAAGADALLLA 136 (332)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC
Confidence 5677899999999 99999883
No 176
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=88.81 E-value=1.8 Score=37.09 Aligned_cols=79 Identities=11% Similarity=0.026 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-gr~pviaGvg~~ 79 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGT----------TGESPTLSHEEHKKVIEKVVDVV--------N-GRVQVIAGAGSN 79 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSEEEEECCCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCCC
Confidence 777788887776 558999887433 44444445666667777666641 1 2578887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 80 ~t~~ai~la~~a~~~Gadavlv~ 102 (289)
T 2yxg_A 80 CTEEAIELSVFAEDVGADAVLSI 102 (289)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC
Confidence 5677899999999 99999884
No 177
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=88.69 E-value=1.3 Score=38.46 Aligned_cols=79 Identities=11% Similarity=-0.058 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~Gt----------TGE~~~Ls~~Er~~v~~~~v~~~--------~-grvpViaGvg~~ 103 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGS----------TGEGAYLSDPEWDEVVDFTLKTV--------A-HRVPTIVSVSDL 103 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSCBEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEecCCC
Confidence 667777777776 558999977433 44444445666667777766641 1 2578888766
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 104 ~t~~ai~la~~A~~~Gadavlv~ 126 (315)
T 3na8_A 104 TTAKTVRRAQFAESLGAEAVMVL 126 (315)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC
Confidence 5678899999999 99999883
No 178
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=88.55 E-value=1.3 Score=37.06 Aligned_cols=81 Identities=14% Similarity=-0.079 Sum_probs=56.7
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCE--EEecCCC--chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDG--IDINIGC--PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~--Idin~gC--P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+..+|...|...+.+.++.+++ |+|. +|+==|- |+. .+| + .+++.+++.
T Consensus 16 i~psila~D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~-----t~G------~----~~v~~lr~~----------- 69 (237)
T 3cu2_A 16 LSVGILSANWLQLNEEVTTLLENQINVLHFDIADGQFSSLF-----TVG------A----IGIKYFPTH----------- 69 (237)
T ss_dssp EEEEGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCB-----CBC------T----HHHHTSCTT-----------
T ss_pred EEEeeeeCCcccHHHHHHHHHHcCCCEEEEEEecCccccch-----hhh------H----HHHHHHhhh-----------
Confidence 5667778898888888888865 6775 4552231 321 011 2 466776665
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
++. -+++.+++...+++.+.+ |+|.+|+|.=.
T Consensus 70 ~~~--DvhLMv~~p~~~i~~~~~aGAd~itvH~ea 102 (237)
T 3cu2_A 70 CFK--DVHLMVRNQLEVAKAVVANGANLVTLQLEQ 102 (237)
T ss_dssp SEE--EEEEECSCHHHHHHHHHHTTCSEEEEETTC
T ss_pred CCC--CeEEEEECHHHHHHHHHHcCCCEEEEecCC
Confidence 443 888888888899999999 99999999743
No 179
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=88.54 E-value=1.6 Score=37.94 Aligned_cols=79 Identities=8% Similarity=-0.113 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . -++||.+=+.
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~v~~~--------~-grvpViaGvg~~ 102 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGT----------TGESATLDVEEHIQVIRRVVDQV--------K-GRIPVIAGTGAN 102 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSG----------GGTGGGCCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCCc
Confidence 667777777776 458999977433 44444445666667777666641 1 2578888666
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 103 st~eai~la~~A~~~Gadavlv~ 125 (314)
T 3qze_A 103 STREAVALTEAAKSGGADACLLV 125 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Confidence 5678899999999 99999884
No 180
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=88.53 E-value=1.6 Score=37.72 Aligned_cols=79 Identities=10% Similarity=-0.063 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~~~~~--------~-grvpViaGvg~~ 91 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGT----------TGESPTVNEDEREKLVSRTLEIV--------D-GKIPVIVGAGTN 91 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSG----------GGTGGGCCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHh--------C-CCCeEEEcCCCc
Confidence 677788887776 458999877433 44444446666667777766641 1 2578887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 92 st~~ai~la~~A~~~Gadavlv~ 114 (306)
T 1o5k_A 92 STEKTLKLVKQAEKLGANGVLVV 114 (306)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCEEEEC
Confidence 5677899999999 99999884
No 181
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=88.53 E-value=1.4 Score=39.79 Aligned_cols=78 Identities=18% Similarity=0.097 Sum_probs=46.8
Q ss_pred HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHH
Q psy7344 132 AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAY 211 (240)
Q Consensus 132 aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~ 211 (240)
+.++.+.|+|+|-++.+.-+..+.+...+. -..+++.+.++.+.++. .++||.+-..+.+..+++++
T Consensus 198 A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~-g~p~~~al~~v~~~~~~------------~~IPVIA~GGI~~~~di~ka 264 (400)
T 3ffs_A 198 TKELIENGADGIKVGIGPGSICTTRIVAGV-GVPQITAIEKCSSVASK------------FGIPIIADGGIRYSGDIGKA 264 (400)
T ss_dssp HHHHHHTTCSEEEECC---------CCSCB-CCCHHHHHHHHHHHHTT------------TTCCEEEESCCCSHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCCCcCccccccccc-chhHHHHHHHHHHHHHh------------cCCCEEecCCCCCHHHHHHH
Confidence 333445599999996551111111111111 13567777777776543 36788887777777888888
Q ss_pred HhCCCCeEEEe
Q psy7344 212 LQDDWPLLTEL 222 (240)
Q Consensus 212 l~~G~~~itih 222 (240)
+..||+++.+-
T Consensus 265 lalGAd~V~vG 275 (400)
T 3ffs_A 265 LAVGASSVMIG 275 (400)
T ss_dssp HTTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 87799999883
No 182
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=88.52 E-value=1.7 Score=37.21 Aligned_cols=79 Identities=10% Similarity=-0.074 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+.
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-gr~pviaGvg~~ 80 (292)
T 2ojp_A 20 CRASLKKLIDYHVASGTSAIVSVGT----------TGESATLNHDEHADVVMMTLDLA--------D-GRIPVIAGTGAN 80 (292)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccchhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEecCCc
Confidence 677777877776 458999887433 44444445655567777666641 1 2578887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~ 103 (292)
T 2ojp_A 81 ATAEAISLTQRFNDSGIVGCLTV 103 (292)
T ss_dssp SHHHHHHHHHHTTTSSCSEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCEEEEC
Confidence 4667889999999 99999884
No 183
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=88.51 E-value=1.8 Score=37.06 Aligned_cols=79 Identities=14% Similarity=-0.051 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-gr~pviaGvg~~ 80 (291)
T 3tak_A 20 DWKSLEKLVEWHIEQGTNSIVAVGT----------TGEASTLSMEEHTQVIKEIIRVA--------N-KRIPIIAGTGAN 80 (291)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc----------ccccccCCHHHHHHHHHHHHHHh--------C-CCCeEEEeCCCC
Confidence 667777777776 458999977433 34444345565567777766641 1 2578888666
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~ 103 (291)
T 3tak_A 81 STREAIELTKAAKDLGADAALLV 103 (291)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEc
Confidence 5678899999999 99999884
No 184
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.47 E-value=2 Score=36.86 Aligned_cols=79 Identities=11% Similarity=0.147 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHH-c-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-
Q psy7344 125 DSKNLTEAAKLA-E-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r- 201 (240)
|.+.+.+.++.+ + .|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+.
T Consensus 22 D~~~l~~lv~~li~~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpviaGvg~ 82 (293)
T 1f6k_A 22 NEKGLRQIIRHNIDKMKVDGLYVGGS----------TGENFMLSTEEKKEIFRIAKDEA--------K-DQIALIAQVGS 82 (293)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSEEEEECCC
T ss_pred CHHHHHHHHHHHHhhCCCcEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHh--------C-CCCeEEEecCC
Confidence 677777877765 6 68999887433 44444445666667777766641 1 2678887776
Q ss_pred --hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 --VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 --~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 83 ~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 83 VNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEC
Confidence 5677899999999 99999884
No 185
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=88.39 E-value=0.97 Score=39.59 Aligned_cols=35 Identities=9% Similarity=0.033 Sum_probs=27.6
Q ss_pred CCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccccc
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKMAM 227 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~~~ 227 (240)
.++||.+-..+.+..+.++++..||+++.+ ||--.
T Consensus 209 ~~ipVIa~GGI~~g~Dv~kalalGAdaV~i-Gr~~l 243 (336)
T 1ypf_A 209 ASKPIIADGGIRTNGDVAKSIRFGATMVMI-GSLFA 243 (336)
T ss_dssp CSSCEEEESCCCSTHHHHHHHHTTCSEEEE-SGGGT
T ss_pred cCCcEEEeCCCCCHHHHHHHHHcCCCEEEe-Chhhh
Confidence 466888877777778888888779999998 77543
No 186
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=88.33 E-value=0.71 Score=42.77 Aligned_cols=32 Identities=16% Similarity=0.022 Sum_probs=27.4
Q ss_pred CCeeeEEeeehhcHHHHHHHHhCCCCeEEEecc
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQDDWPLLTELGK 224 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R 224 (240)
.++||.+-..+.+..+.++++..||+++.+ ||
T Consensus 357 ~~ipVia~GGI~~~~di~kala~GAd~V~i-G~ 388 (514)
T 1jcn_A 357 FGVPIIADGGIQTVGHVVKALALGASTVMM-GS 388 (514)
T ss_dssp GTCCEEEESCCCSHHHHHHHHHTTCSEEEE-ST
T ss_pred CCCCEEEECCCCCHHHHHHHHHcCCCeeeE-CH
Confidence 567898888888888899988889999999 76
No 187
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=88.31 E-value=2 Score=37.11 Aligned_cols=79 Identities=9% Similarity=-0.105 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.=.++++.+.+.+ . .++||.+-+-
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 95 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGT----------TGESPTTTAAEKLELLKAVREEV--------G-DRAKLIAGVGTN 95 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST----------TTTTTTSCHHHHHHHHHHHHHHH--------T-TTSEEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEecCCCC
Confidence 677777877766 458999877433 44444445555567777666641 1 2578887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 96 st~~ai~la~~A~~~Gadavlv~ 118 (304)
T 3cpr_A 96 NTRTSVELAEAAASAGADGLLVV 118 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC
Confidence 5677899999999 99999873
No 188
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=88.16 E-value=0.44 Score=41.04 Aligned_cols=93 Identities=9% Similarity=0.022 Sum_probs=52.5
Q ss_pred CCceeEEeecCCHH-HHHHHHHHHcc-CCCEEEecCCCchhhhhccccccccc---CCHHHHHHHHHHhhhccccccCCC
Q psy7344 114 MCGHSLMFCGNDSK-NLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQ---DDWPLLTNLVYSPNMVHFVIAEPH 188 (240)
Q Consensus 114 ~~pvivqi~g~d~~-~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~---~~p~~i~~iv~~~~~~~~~i~~~~ 188 (240)
+.||+.|+.+.||. .+-...+.+.+ |+.|| +|.. .... ..+.++..|- --.+...++++..++.
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~p-tvgl-idG~fr~~LEE~gm~~~~eve~I~~A~~~-------- 162 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFP-TVGL-IDGLFRQNLEETGMSYAQEVEMIAEAHKL-------- 162 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECS-CGGG-CCHHHHHHHHHTTCCHHHHHHHHHHHHHT--------
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECC-Cccc-ccchhhhhHhhcCCCHHHHHHHHHHHHHC--------
Confidence 58999999888886 45555566655 89999 9985 2221 2233333331 1234444455444442
Q ss_pred CCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEecc
Q psy7344 189 CDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 189 ~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R 224 (240)
++ +|+ -+....+-++...+ |+|.|.+|.=
T Consensus 163 ----gL-~Ti--~~v~~~eeA~amA~agpDiI~~h~g 192 (286)
T 2p10_A 163 ----DL-LTT--PYVFSPEDAVAMAKAGADILVCHMG 192 (286)
T ss_dssp ----TC-EEC--CEECSHHHHHHHHHHTCSEEEEECS
T ss_pred ----CC-eEE--EecCCHHHHHHHHHcCCCEEEECCC
Confidence 11 111 01233444555566 9999999964
No 189
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=88.09 E-value=1.6 Score=37.62 Aligned_cols=79 Identities=10% Similarity=-0.068 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+.
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 79 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGT----------TGESPTLTEEEHKRVVALVAEQA--------Q-GRVPVIAGAGSN 79 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSCBEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccchhhCCHHHHHHHHHHHHHHh--------C-CCCeEEEccCCC
Confidence 777777877766 558999877332 44444445655567777666641 1 2578887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~ 102 (297)
T 2rfg_A 80 NPVEAVRYAQHAQQAGADAVLCV 102 (297)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEc
Confidence 5677899999999 99999883
No 190
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=88.03 E-value=1.8 Score=37.05 Aligned_cols=79 Identities=11% Similarity=-0.058 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-gr~pvi~Gvg~~ 80 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGT----------TGEATTMTETERKETIKFVIDKV--------N-KRIPVIAGTGSN 80 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCcc
Confidence 566677777765 458999877433 44444445555567777666541 1 2578887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 81 ~t~~ai~la~~a~~~Gadavlv~ 103 (291)
T 3a5f_A 81 NTAASIAMSKWAESIGVDGLLVI 103 (291)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cHHHHHHHHHHHHhcCCCEEEEc
Confidence 5677889999999 99999884
No 191
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.00 E-value=1.8 Score=37.08 Aligned_cols=79 Identities=8% Similarity=-0.076 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-..+.-.++++.+.+.+ . .++||.+-+.
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Lt~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 81 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGT----------TAESPTLTTDEKELILKTVIDLV--------D-KRVPVIAGTGTN 81 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccccccCCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCcc
Confidence 666777777765 558999977433 34444345555556777666541 1 3678888765
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 82 ~t~~ai~la~~a~~~Gadavlv~ 104 (292)
T 3daq_A 82 DTEKSIQASIQAKALGADAIMLI 104 (292)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEEC
Confidence 5678899999999 99999884
No 192
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=87.97 E-value=1.8 Score=38.57 Aligned_cols=73 Identities=10% Similarity=0.097 Sum_probs=53.3
Q ss_pred cCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee
Q psy7344 123 GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM 201 (240)
Q Consensus 123 g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r 201 (240)
+.+++++.+.++.+ +.|+++|.|..|. ..++...++++++++++ +.++++.++..
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~---------G~d~~l~vDan 202 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPML---------------DSLSISIQFVEKVREIV---------GDELPLMLDLA 202 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCC---------------SSHHHHHHHHHHHHHHH---------CSSSCEEEECC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC---------------ChHHHHHHHHHHHHHHh---------CCCCEEEEEcC
Confidence 46888888776655 5689999998762 11466667888888762 13567777765
Q ss_pred ----hhcHHHHHHHHhC-CCCeE
Q psy7344 202 ----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 ----~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 203 ~~~~~~~a~~~~~~l~~~~i~~i 225 (391)
T 2qgy_A 203 VPEDLDQTKSFLKEVSSFNPYWI 225 (391)
T ss_dssp CCSCHHHHHHHHHHHGGGCCSEE
T ss_pred CCCCHHHHHHHHHHHHhcCCCeE
Confidence 4567899999999 99987
No 193
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=87.95 E-value=1.3 Score=40.66 Aligned_cols=104 Identities=10% Similarity=0.012 Sum_probs=60.4
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhh--cccccccccCCHHHHHHHHHHh
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAK--RGHYGAYLQDDWPLLTNLVYSP 177 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~--~~g~G~~l~~~p~~i~~iv~~~ 177 (240)
++.++.+..... +.|+++. .+.+++ ++.++.+.|+|+|.++.|.-..... ..+.| ....+.+.++.+.+
T Consensus 266 ~e~i~~i~~~~p--~~pvi~g-~~~t~e---~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g---~p~~~~l~~v~~~~ 336 (494)
T 1vrd_A 266 IETLEMIKADYP--DLPVVAG-NVATPE---GTEALIKAGADAVKVGVGPGSICTTRVVAGVG---VPQLTAVMECSEVA 336 (494)
T ss_dssp HHHHHHHHHHCT--TSCEEEE-EECSHH---HHHHHHHTTCSEEEECSSCSTTCHHHHHHCCC---CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC--CceEEeC-CcCCHH---HHHHHHHcCCCEEEEcCCCCccccccccCCCC---ccHHHHHHHHHHHH
Confidence 445555544331 3566553 123443 3334445699999996652100000 01111 24566666666654
Q ss_pred hhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 178 NMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 178 ~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
+. .++||.+-..+.+..+.++++..|||++.+ ||-
T Consensus 337 ~~------------~~ipvia~GGI~~~~di~kala~GAd~V~i-Gr~ 371 (494)
T 1vrd_A 337 RK------------YDVPIIADGGIRYSGDIVKALAAGAESVMV-GSI 371 (494)
T ss_dssp HT------------TTCCEEEESCCCSHHHHHHHHHTTCSEEEE-SHH
T ss_pred hh------------cCCCEEEECCcCCHHHHHHHHHcCCCEEEE-CHH
Confidence 33 467888877777888889888889999987 654
No 194
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=87.95 E-value=1.5 Score=37.21 Aligned_cols=78 Identities=18% Similarity=0.167 Sum_probs=54.0
Q ss_pred CCHHHHHHHHH-HHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-
Q psy7344 124 NDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM- 201 (240)
Q Consensus 124 ~d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r- 201 (240)
.|.+...+.++ ++++|+|.||||.|- .....++.+++++..+++. .++|+|+-..
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~------------~~v~~~ee~~rvv~~i~~~-----------~~~pisIDT~~ 78 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGP------------AVQDKVSAMEWLVEVTQEV-----------SNLTLCLDSTN 78 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----------------CHHHHHHHHHHHHHTT-----------CCSEEEEECSC
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCC------------CCCChHHHHHHHHHHHHHh-----------CCCeEEEeCCC
Confidence 46676666555 456799999999862 1235788888888888775 5778888765
Q ss_pred -------h----------------hcHHHHHHHHhC-CCCeEEEecc
Q psy7344 202 -------V----------------AKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 202 -------~----------------~~~~~~~~~l~~-G~~~itih~R 224 (240)
+ +...++++.+.+ |+..|.+|.+
T Consensus 79 ~~v~~aAl~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~ 125 (262)
T 1f6y_A 79 IKAIEAGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMN 125 (262)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCC
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCC
Confidence 0 112267777778 9999999974
No 195
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=87.92 E-value=0.066 Score=44.39 Aligned_cols=60 Identities=13% Similarity=0.063 Sum_probs=40.9
Q ss_pred CChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHcc---CCCEEEecCCCchhhhhcccccccccCCHHHHHHHH
Q psy7344 98 DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEP---HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 174 (240)
Q Consensus 98 ~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~---~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv 174 (240)
.+++++.++...+ ..|+++. +++.+..++.++++. |+|+|+++.+ ++.+|+.+.+++
T Consensus 180 ~~~~~~~~l~~~~---~ipvia~---GGI~~~~d~~~~~~~~~~Gad~v~vG~a--------------l~~~~~~~~~~~ 239 (244)
T 2y88_A 180 PNLDLLAGVADRT---DAPVIAS---GGVSSLDDLRAIATLTHRGVEGAIVGKA--------------LYARRFTLPQAL 239 (244)
T ss_dssp CCHHHHHHHHTTC---SSCEEEE---SCCCSHHHHHHHHTTGGGTEEEEEECHH--------------HHTTSSCHHHHH
T ss_pred CCHHHHHHHHHhC---CCCEEEE---CCCCCHHHHHHHHhhccCCCCEEEEcHH--------------HHCCCcCHHHHH
Confidence 3688888876543 4787766 666666677777776 8999998655 444555566666
Q ss_pred HHh
Q psy7344 175 YSP 177 (240)
Q Consensus 175 ~~~ 177 (240)
+.+
T Consensus 240 ~~~ 242 (244)
T 2y88_A 240 AAV 242 (244)
T ss_dssp HHT
T ss_pred HHh
Confidence 654
No 196
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=87.81 E-value=1.7 Score=38.22 Aligned_cols=79 Identities=9% Similarity=-0.098 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~ve~~--------~-grvpViaGvg~~ 110 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGS----------GGEFSQLGAEERKAIARFAIDHV--------D-RRVPVLIGTGGT 110 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSCEEEECCSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEecCCC
Confidence 667777777766 458899877433 44444446666667777766641 1 2678887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 111 st~eai~la~~A~~~Gadavlv~ 133 (343)
T 2v9d_A 111 NARETIELSQHAQQAGADGIVVI 133 (343)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC
Confidence 5677899999999 99999884
No 197
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.79 E-value=2.2 Score=37.01 Aligned_cols=77 Identities=10% Similarity=0.005 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-..+.-.++++.+.+. + -++||.+=+.
T Consensus 27 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Lt~~Er~~v~~~~v~~--------~--grvpViaGvg~~ 86 (313)
T 3dz1_A 27 DDVSIDRLTDFYAEVGCEGVTVLGI----------LGEAPKLDAAEAEAVATRFIKR--------A--KSMQVIVGVSAP 86 (313)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESTG----------GGTGGGSCHHHHHHHHHHHHHH--------C--TTSEEEEECCCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEeCcc----------CcChhhCCHHHHHHHHHHHHHH--------c--CCCcEEEecCCC
Confidence 667777877776 558999977433 4444444566666777777665 1 2678888766
Q ss_pred -hhcHHHHHHHHhC-CCCeEEE
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~iti 221 (240)
..+++++++.+++ |+|++.+
T Consensus 87 ~t~~ai~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 87 GFAAMRRLARLSMDAGAAGVMI 108 (313)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 5678899999999 9999988
No 198
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=87.72 E-value=1.9 Score=37.54 Aligned_cols=79 Identities=5% Similarity=-0.087 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+=+.
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~v~~~--------~-grvpViaGvg~~ 101 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGT----------TGESPTLTHEEHKRIIELCVEQV--------A-KRVPVVAGAGSN 101 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TSSCBEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------ccCccccCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCCC
Confidence 677777877776 558999976433 44444445666667777666641 1 2578888666
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 102 st~~ai~la~~A~~~Gadavlv~ 124 (315)
T 3si9_A 102 STSEAVELAKHAEKAGADAVLVV 124 (315)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC
Confidence 5678899999999 99999884
No 199
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=87.64 E-value=0.83 Score=40.72 Aligned_cols=101 Identities=16% Similarity=-0.013 Sum_probs=54.7
Q ss_pred hhhHHHhhhcccCCCCceeE-EeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 100 WPLLTELGFKTRSHMCGHSL-MFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pviv-qi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
|+.++.++.... +.|+++ ++ .+++ ++.++.+.|+|+|.++.|.-.....+.-.|.. ....+.+.+++
T Consensus 129 ~e~I~~ir~~~~--~~~Vi~G~V--~T~e---~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g-~p~l~aI~~~~---- 196 (361)
T 3r2g_A 129 GKTLKSLRQLLG--SRCIMAGNV--ATYA---GADYLASCGADIIKAGIGGGSVCSTRIKTGFG-VPMLTCIQDCS---- 196 (361)
T ss_dssp HHHHHHHHHHHT--TCEEEEEEE--CSHH---HHHHHHHTTCSEEEECCSSSSCHHHHHHHCCC-CCHHHHHHHHT----
T ss_pred HHHHHHHHHhcC--CCeEEEcCc--CCHH---HHHHHHHcCCCEEEEcCCCCcCccccccCCcc-HHHHHHHHHHH----
Confidence 455555554321 356766 33 3333 34444556999999965510111111000111 12233333222
Q ss_pred hccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 179 MVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 179 ~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
+. .. ||.+-..+.+..+.+++|..|||++.+ ||-
T Consensus 197 ~~-----------~~-PVIAdGGI~~~~di~kALa~GAd~V~i-Gr~ 230 (361)
T 3r2g_A 197 RA-----------DR-SIVADGGIKTSGDIVKALAFGADFVMI-GGM 230 (361)
T ss_dssp TS-----------SS-EEEEESCCCSHHHHHHHHHTTCSEEEE-SGG
T ss_pred Hh-----------CC-CEEEECCCCCHHHHHHHHHcCCCEEEE-ChH
Confidence 22 22 787777787888899999889999999 664
No 200
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=87.55 E-value=2.2 Score=37.13 Aligned_cols=78 Identities=8% Similarity=-0.165 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-..+.-.++++.+.+.+ . .++||.+=+.
T Consensus 30 D~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 90 (318)
T 3qfe_A 30 DLASQERYYAYLARSGLTGLVILGT----------NAEAFLLTREERAQLIATARKAV--------G-PDFPIMAGVGAH 90 (318)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEESSG----------GGTGGGSCHHHHHHHHHHHHHHH--------C-TTSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCCC
Confidence 667777777776 458999977433 34444345555567777666641 1 3678888666
Q ss_pred -hhcHHHHHHHHhC-CCCeEEE
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~iti 221 (240)
..+++++++.+++ |+|++.+
T Consensus 91 ~t~~ai~la~~a~~~Gadavlv 112 (318)
T 3qfe_A 91 STRQVLEHINDASVAGANYVLV 112 (318)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 5678899999999 9999988
No 201
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.27 E-value=1.4 Score=38.04 Aligned_cols=79 Identities=6% Similarity=-0.045 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+.
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 83 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLGS----------TGEFAYLGTAQREAVVRATIEAA--------Q-RRVPVVAGVAST 83 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTSG----------GGTGGGCCHHHHHHHHHHHHHHH--------T-TSSCBEEEEEES
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccCccccCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCCC
Confidence 667777777776 558888866322 44444445666567777766641 1 3678887666
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 84 ~t~~ai~la~~a~~~Gadavlv~ 106 (300)
T 3eb2_A 84 SVADAVAQAKLYEKLGADGILAI 106 (300)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Confidence 5678899999999 99999883
No 202
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=87.24 E-value=3.2 Score=37.41 Aligned_cols=97 Identities=14% Similarity=0.043 Sum_probs=61.9
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhccc----------cc-------ccccCCHHHHHHHHHH
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGH----------YG-------AYLQDDWPLLTNLVYS 176 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g----------~G-------~~l~~~p~~i~~iv~~ 176 (240)
.|+...+.+.+++++.+.++.. ++|+..+-+..|+|...+..+. .| ....++++...+++++
T Consensus 133 v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~a 212 (418)
T 3r4e_A 133 IMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEE 212 (418)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHH
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHH
Confidence 5665556678899888766654 6799999999998753221100 00 0001124556677888
Q ss_pred hhhccccccCCCCCCCCeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 177 PNMVHFVIAEPHCDGNDINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 177 ~~~~~~~i~~~~~~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+++++ +.++++.+... .++.+++++.|++ |+++|-
T Consensus 213 vR~a~---------G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 252 (418)
T 3r4e_A 213 LRKTY---------GFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE 252 (418)
T ss_dssp HHHHH---------CSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE
T ss_pred HHHHc---------CCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE
Confidence 88863 13567776655 4567899999999 999883
No 203
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=87.21 E-value=1.6 Score=38.55 Aligned_cols=104 Identities=11% Similarity=-0.000 Sum_probs=59.5
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchh-hhhcccccccccCCHHHHHHHHHHhh
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQM-VAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~-~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
|+.++++..... +.|+++. +..+..++.+..+.|+|+|.+..| |-. ...+.-.|. .......+.++.+...
T Consensus 149 ~~~i~~lr~~~~--~~~vi~g----~v~t~e~A~~a~~aGaD~I~v~~g-~G~~~~~r~~~g~-~~p~~~~l~~v~~~~~ 220 (351)
T 2c6q_A 149 VEFVKDVRKRFP--QHTIMAG----NVVTGEMVEELILSGADIIKVGIG-PGSVCTTRKKTGV-GYPQLSAVMECADAAH 220 (351)
T ss_dssp HHHHHHHHHHCT--TSEEEEE----EECSHHHHHHHHHTTCSEEEECSS-CSTTBCHHHHHCB-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCeEEEE----eCCCHHHHHHHHHhCCCEEEECCC-CCcCcCccccCCC-CccHHHHHHHHHHHHh
Confidence 344555544321 3566643 122233444555679999999654 210 000000010 1234556666666543
Q ss_pred hccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEecc
Q psy7344 179 MVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGK 224 (240)
Q Consensus 179 ~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R 224 (240)
. .++||.+-..+.+-.++++++..||+++.+ ||
T Consensus 221 ~------------~~ipvIa~GGI~~g~di~kAlalGA~~V~v-G~ 253 (351)
T 2c6q_A 221 G------------LKGHIISDGGCSCPGDVAKAFGAGADFVML-GG 253 (351)
T ss_dssp H------------TTCEEEEESCCCSHHHHHHHHHTTCSEEEE-ST
T ss_pred h------------cCCcEEEeCCCCCHHHHHHHHHcCCCceec-cH
Confidence 3 357888877788888999999889999988 55
No 204
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=87.20 E-value=1.8 Score=37.15 Aligned_cols=80 Identities=10% Similarity=-0.089 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+-
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~--------~-gr~pviaGvg~~ 79 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGT----------TGESPTLSKSEHEQVVEITIKTA--------N-GRVPVIAGAGSN 79 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSCBEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEecCCc
Confidence 777788887776 558899876332 44444446666667777766641 1 2578887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEec
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih~ 223 (240)
..+++++++.+++ |+|++.+-.
T Consensus 80 ~t~~ai~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 80 STAEAIAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cHHHHHHHHHHHHHcCCCEEEEcC
Confidence 4677889999999 999998843
No 205
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=86.99 E-value=1.9 Score=37.29 Aligned_cols=79 Identities=9% Similarity=-0.011 Sum_probs=55.4
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.=.++++.+.+.+ . .++||.+-+.
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpviaGvg~~ 87 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILAN----------FSEQFAITDDERDVLTRTILEHV--------A-GRVPVIVTTSHY 87 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccCcccCCHHHHHHHHHHHHHHh--------C-CCCcEEEecCCc
Confidence 667777777776 558899877333 44444445555567777666641 1 3678888776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 88 ~t~~ai~la~~A~~~Gadavlv~ 110 (309)
T 3fkr_A 88 STQVCAARSLRAQQLGAAMVMAM 110 (309)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHHHHcCCCEEEEc
Confidence 5678899999999 99999884
No 206
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=86.97 E-value=2.2 Score=38.75 Aligned_cols=85 Identities=11% Similarity=0.035 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-
Q psy7344 124 NDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM- 201 (240)
Q Consensus 124 ~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r- 201 (240)
.+++++.+.++.. +.|+..|-++.|+|.... .|.. ....+++...++++++++++ |.++++.+...
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~--~G~~-~~~~~~~~d~e~v~avR~av---------G~d~~L~vDan~ 212 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR--GGHM-PAMTDISLSVEFCRKIRAAV---------GDKADLLFGTHG 212 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT--CCBC-CCHHHHHHHHHHHHHHHHHH---------TTSSEEEECCCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc--cCCC-cchhhHHHHHHHHHHHHHHh---------CCCCeEEEeCCC
Confidence 5788887766654 679999999999886421 1111 11124566667788888763 13566766554
Q ss_pred ---hhcHHHHHHHHhC-CCCeEE
Q psy7344 202 ---VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 202 ---~~~~~~~~~~l~~-G~~~it 220 (240)
.++..++++.|++ |+++|-
T Consensus 213 ~~t~~~A~~~~~~Le~~~i~~iE 235 (433)
T 3rcy_A 213 QFTTAGAIRLGQAIEPYSPLWYE 235 (433)
T ss_dssp CBCHHHHHHHHHHHGGGCCSEEE
T ss_pred CCCHHHHHHHHHHhhhcCCCEEE
Confidence 4567889999999 999883
No 207
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=86.86 E-value=2.5 Score=37.12 Aligned_cols=80 Identities=5% Similarity=-0.105 Sum_probs=56.4
Q ss_pred CceeEEeecCCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+...+++++.+.++. ++.|+..+.+..|| +++.-.+.++++++++ +.+
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~---------g~~ 184 (356)
T 3ro6_B 130 LPTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG----------------DEEQDFERLRRLHETL---------AGR 184 (356)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHH---------TTS
T ss_pred eeeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHh---------CCC
Confidence 455566666788888776655 46789999998884 3445556677777762 135
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+++.+... .++..++++.|++ |+++|
T Consensus 185 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 215 (356)
T 3ro6_B 185 AVVRVDPNQSYDRDGLLRLDRLVQELGIEFI 215 (356)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 56666655 3567889999999 99998
No 208
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=86.85 E-value=2.1 Score=38.12 Aligned_cols=80 Identities=10% Similarity=0.050 Sum_probs=54.6
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+...+++.+.+.++.+ +.|+++|.+..|. +++...++++++++++ +.+
T Consensus 135 vp~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~---------g~d 189 (397)
T 2qde_A 135 IPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG----------------PLKADIAMVAEVRRAV---------GDD 189 (397)
T ss_dssp EEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS----------------CHHHHHHHHHHHHHHH---------CTT
T ss_pred cceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC----------------CHHHHHHHHHHHHHhh---------CCC
Confidence 4554444336888887766655 5699999997772 4555567777777762 134
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+++.+... .++..++++.|++ |+++|
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 220 (397)
T 2qde_A 190 VDLFIDINGAWTYDQALTTIRALEKYNLSKI 220 (397)
T ss_dssp SCEEEECTTCCCHHHHHHHHHHHGGGCCSCE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhCCCCEE
Confidence 56665544 3567889999999 99987
No 209
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=86.81 E-value=1.7 Score=34.98 Aligned_cols=36 Identities=8% Similarity=0.048 Sum_probs=30.5
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGC 149 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gC 149 (240)
..|++.+|.+.|.+++.+.++.+.+ |++.|.+...+
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~ 42 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNS 42 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTS
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999998888865 79999987664
No 210
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=86.55 E-value=2 Score=36.65 Aligned_cols=76 Identities=18% Similarity=0.126 Sum_probs=52.3
Q ss_pred CHHHHHHHHH-HHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh-
Q psy7344 125 DSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV- 202 (240)
Q Consensus 125 d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~- 202 (240)
|.+...+.++ ++++|+|.||||.+-+ .-..++.+..+++.+++. .++|+++-..-
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~------------~~eE~~rv~~vi~~l~~~-----------~~~pisIDT~~~ 88 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPT------------ADDPVRVMEWLVKTIQEV-----------VDLPCCLDSTNP 88 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSC------------SSCHHHHHHHHHHHHHHH-----------CCCCEEEECSCH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcC------------chhHHHHHHHHHHHHHHh-----------CCCeEEEeCCCH
Confidence 4555555444 4567999999998831 224688888888888876 56788776550
Q ss_pred -----------------------hcHHHHHHHHhC-CCCeEEEec
Q psy7344 203 -----------------------AKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 203 -----------------------~~~~~~~~~l~~-G~~~itih~ 223 (240)
++..++++.+.+ |+..|.+|.
T Consensus 89 ~v~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 89 DAIEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp HHHHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCCEEEEec
Confidence 112456666777 888888886
No 211
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=86.45 E-value=1.5 Score=35.43 Aligned_cols=34 Identities=3% Similarity=-0.205 Sum_probs=28.4
Q ss_pred CCeeeEEeee--hhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 192 NDINIGCPQM--VAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 192 ~~~pvsvK~r--~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
..+++-+|+- ..+...+++.+.+ |+|.+|+|+=.
T Consensus 52 ~~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~ 88 (208)
T 2czd_A 52 VEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFV 88 (208)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTT
T ss_pred CEEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEeccC
Confidence 5678899998 5666788888888 99999999854
No 212
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=86.29 E-value=2.4 Score=36.73 Aligned_cols=79 Identities=8% Similarity=-0.135 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.=.++++.+.+.+ . -++||.+-+.
T Consensus 31 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~v~~~--------~-grvpViaGvg~~ 91 (316)
T 3e96_A 31 DWHHYKETVDRIVDNGIDVIVPCGN----------TSEFYALSLEEAKEEVRRTVEYV--------H-GRALVVAGIGYA 91 (316)
T ss_dssp CHHHHHHHHHHHHTTTCCEECTTSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSEEEEEECSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------ccCcccCCHHHHHHHHHHHHHHh--------C-CCCcEEEEeCcC
Confidence 667777777776 558899866332 44444445655567777666541 1 2578877665
Q ss_pred hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 ~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 92 t~~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 92 TSTAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEc
Confidence 5667889999999 99999883
No 213
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=86.14 E-value=1.4 Score=38.99 Aligned_cols=74 Identities=7% Similarity=-0.148 Sum_probs=49.1
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+...+++.+.+.++.+ +.|++.|.++.||| +++...++++++++++ +.+
T Consensus 135 v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~---------g~~ 190 (378)
T 2qdd_A 135 VPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS---------------DPAQDIARIEAISAGL---------PDG 190 (378)
T ss_dssp EEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSC---------CTT
T ss_pred CceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC---------------ChHHHHHHHHHHHHHh---------CCC
Confidence 4555555457888887776655 56999999998874 4566667888888862 135
Q ss_pred eeeEEeee--h--hcHHHHHHHH
Q psy7344 194 INIGCPQM--V--AKRGHYGAYL 212 (240)
Q Consensus 194 ~pvsvK~r--~--~~~~~~~~~l 212 (240)
+++.++.. + ++..++++.|
T Consensus 191 ~~l~vDan~~~~~~~a~~~~~~l 213 (378)
T 2qdd_A 191 HRVTFDVNRAWTPAIAVEVLNSV 213 (378)
T ss_dssp CEEEEECTTCCCHHHHHHHHTSC
T ss_pred CEEEEeCCCCCCHHHHHHHHHHh
Confidence 67777765 3 3344555544
No 214
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=86.08 E-value=1.1 Score=37.08 Aligned_cols=74 Identities=11% Similarity=-0.048 Sum_probs=45.6
Q ss_pred HHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHH
Q psy7344 128 NLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRG 206 (240)
Q Consensus 128 ~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~ 206 (240)
++.+.++.+++ |++.|-+.-- ...+.+ -..+++.++++.+ . .++||.+...+.+..
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~------~~~~~~--~~~~~~~i~~i~~----~-----------~~ipvi~~Ggi~~~~ 92 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSI------DRDGTK--SGYDTEMIRFVRP----L-----------TTLPIIASGGAGKME 92 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEET------TTTTCS--SCCCHHHHHHHGG----G-----------CCSCEEEESCCCSHH
T ss_pred CHHHHHHHHHHcCCCEEEEEec------CcccCC--CcccHHHHHHHHH----h-----------CCCCEEEeCCCCCHH
Confidence 56778888765 7888865321 001111 1357776665554 3 577898888776666
Q ss_pred HHHHHHhCCCCeEEEeccc
Q psy7344 207 HYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 207 ~~~~~l~~G~~~itih~R~ 225 (240)
++.+.++.|+|.+.+ ||.
T Consensus 93 ~~~~~l~~Gad~V~i-g~~ 110 (247)
T 3tdn_A 93 HFLEAFLRGADKVSI-NTA 110 (247)
T ss_dssp HHHHHHHTTCSEECC-SHH
T ss_pred HHHHHHHcCCCeeeh-hhH
Confidence 655555448888877 553
No 215
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=86.06 E-value=3 Score=34.26 Aligned_cols=86 Identities=12% Similarity=-0.072 Sum_probs=51.9
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
.++++-+--.+.++..+.++.+...++.|.++.+ .-. . + -|+.++++.+... . ..+
T Consensus 6 ~~livAlD~~~~~~a~~~~~~~~~~~~~ikvg~~--lf~--~--~------G~~~v~~l~~~~p-~-----------~~i 61 (221)
T 3exr_A 6 PNLQVALDHSNLKGAITAAVSVGNEVDVIEAGTV--CLL--Q--V------GSELVEVLRSLFP-D-----------KII 61 (221)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHGGGCSEEEECHH--HHH--H--H------CTHHHHHHHHHCT-T-----------SEE
T ss_pred CCEEEEeCCCCHHHHHHHHHhhCCCceEEEECHH--HHH--h--c------CHHHHHHHHHhCC-C-----------CcE
Confidence 3466665445667667777776666889999554 221 1 1 2344544443210 1 456
Q ss_pred eeEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 195 NIGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 195 pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.+-+|+- +...-+++.+.+ |+|.+|+|+=.
T Consensus 62 flDlKl~-Dip~t~~~~~~~~Gad~vtVH~~~ 92 (221)
T 3exr_A 62 VADTKCA-DAGGTVAKNNAVRGADWMTCICSA 92 (221)
T ss_dssp EEEEEEC-SCHHHHHHHHHTTTCSEEEEETTS
T ss_pred EEEEEee-ccHHHHHHHHHHcCCCEEEEeccC
Confidence 7778887 333344566788 99999999853
No 216
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=85.60 E-value=1.2 Score=41.43 Aligned_cols=79 Identities=14% Similarity=0.151 Sum_probs=51.3
Q ss_pred HHHHHHccCCCEEEecCCCchhhhhc--ccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHH
Q psy7344 131 EAAKLAEPHCDGIDINIGCPQMVAKR--GHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHY 208 (240)
Q Consensus 131 ~aa~~le~~~d~Idin~gCP~~~~~~--~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~ 208 (240)
.+.+..+.|+|+|.++.|.-...+.+ .|.| ..+...+.++.+.+++ .++||.+-..+.+..++
T Consensus 310 ~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g---~p~~~~l~~v~~~~~~------------~~iPVIa~GGI~~~~di 374 (511)
T 3usb_A 310 ATKALIEAGANVVKVGIGPGSICTTRVVAGVG---VPQLTAVYDCATEARK------------HGIPVIADGGIKYSGDM 374 (511)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTCCHHHHHCCC---CCHHHHHHHHHHHHHT------------TTCCEEEESCCCSHHHH
T ss_pred HHHHHHHhCCCEEEECCCCccccccccccCCC---CCcHHHHHHHHHHHHh------------CCCcEEEeCCCCCHHHH
Confidence 33344455999999876521111111 1222 3566777777766554 35788887778888899
Q ss_pred HHHHhCCCCeEEEeccc
Q psy7344 209 GAYLQDDWPLLTELGKM 225 (240)
Q Consensus 209 ~~~l~~G~~~itih~R~ 225 (240)
++++..||+++.+ ||-
T Consensus 375 ~kala~GA~~V~v-Gs~ 390 (511)
T 3usb_A 375 VKALAAGAHVVML-GSM 390 (511)
T ss_dssp HHHHHTTCSEEEE-STT
T ss_pred HHHHHhCchhhee-cHH
Confidence 9998889999998 653
No 217
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=85.48 E-value=1.1 Score=36.73 Aligned_cols=67 Identities=13% Similarity=0.036 Sum_probs=43.4
Q ss_pred HH--HHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEE--ee
Q psy7344 126 SK--NLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGC--PQ 200 (240)
Q Consensus 126 ~~--~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsv--K~ 200 (240)
++ ++.+.++.+++ |+++|.++ .|+.+ +.+++. +++|+.. |.
T Consensus 33 ~~~~~~~~~a~~~~~~G~~~i~~~-------------------~~~~i----~~i~~~-----------~~~p~i~~~~~ 78 (234)
T 1yxy_A 33 ETGGIMPLMAKAAQEAGAVGIRAN-------------------SVRDI----KEIQAI-----------TDLPIIGIIKK 78 (234)
T ss_dssp TTCCSHHHHHHHHHHHTCSEEEEE-------------------SHHHH----HHHHTT-----------CCSCEEEECBC
T ss_pred CccchHHHHHHHHHHCCCcEeecC-------------------CHHHH----HHHHHh-----------CCCCEEeeEcC
Confidence 66 77888888765 78888764 24444 344444 5667631 11
Q ss_pred -------ehhcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 201 -------MVAKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 201 -------r~~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
-+....+.++.+.+ |+|.|.+|....
T Consensus 79 ~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~ 112 (234)
T 1yxy_A 79 DYPPQEPFITATMTEVDQLAALNIAVIAMDCTKR 112 (234)
T ss_dssp CCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSS
T ss_pred CCCccccccCChHHHHHHHHHcCCCEEEEccccc
Confidence 12345677888888 999999998653
No 218
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=85.46 E-value=3.4 Score=36.75 Aligned_cols=79 Identities=9% Similarity=-0.001 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.=.++++.+.+.+ . .++||.+-+-
T Consensus 78 D~~al~~lv~~li~~Gv~Gl~v~GT----------TGE~~~Ls~eEr~~vi~~~ve~~--------~-grvpViaGvg~~ 138 (360)
T 4dpp_A 78 DLEAYDDLVNIQIQNGAEGVIVGGT----------TGEGQLMSWDEHIMLIGHTVNCF--------G-GSIKVIGNTGSN 138 (360)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHH--------T-TTSEEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCeEEEecCCC
Confidence 667777777766 558999987433 34444334555556666655541 1 3578887665
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+.
T Consensus 139 st~eai~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 139 STREAIHATEQGFAVGMHAALHI 161 (360)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Confidence 5677889999999 99999884
No 219
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=84.77 E-value=3.2 Score=35.24 Aligned_cols=88 Identities=9% Similarity=0.007 Sum_probs=54.4
Q ss_pred eeEEeecC--CHHHHHHHHHHHccCCCEEEecCCCchhh------------hhcccccccccCCHHHHHHHHHHhhhccc
Q psy7344 117 HSLMFCGN--DSKNLTEAAKLAEPHCDGIDINIGCPQMV------------AKRGHYGAYLQDDWPLLTNLVYSPNMVHF 182 (240)
Q Consensus 117 vivqi~g~--d~~~~~~aa~~le~~~d~Idin~gCP~~~------------~~~~g~G~~l~~~p~~i~~iv~~~~~~~~ 182 (240)
++.=|..+ +.+.+.+.++.+++++|+|+|+.--..+. +...| -+.+.+-++++.+++.
T Consensus 18 li~~i~~GdP~~~~~~~~~~~l~~~aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G------~~~~~~~~~v~~ir~~-- 89 (271)
T 1ujp_A 18 LIPYLTAGFPSREGFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKG------MSVQGALELVREVRAL-- 89 (271)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTT------CCHHHHHHHHHHHHHH--
T ss_pred EEEEecCCCCChHHHHHHHHHHHhcCCEEEECCCCCCcccccHHHHHHHHHHHHcC------CCHHHHHHHHHHHHhc--
Confidence 44444444 55677888888866699999964211010 01111 2445555777777776
Q ss_pred cccCCCCCCCCeeeEEeeehh-----cHHHHHHHHhC-CCCeEEE
Q psy7344 183 VIAEPHCDGNDINIGCPQMVA-----KRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 183 ~i~~~~~~~~~~pvsvK~r~~-----~~~~~~~~l~~-G~~~iti 221 (240)
.++|+.+=.-++ -+..+++.+.+ |+|++.+
T Consensus 90 ---------~~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv 125 (271)
T 1ujp_A 90 ---------TEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVIL 125 (271)
T ss_dssp ---------CCSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEEC
T ss_pred ---------CCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEe
Confidence 577888822122 34788899999 9998876
No 220
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=84.40 E-value=5.9 Score=33.74 Aligned_cols=76 Identities=13% Similarity=-0.080 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+. ..- |.+=+.
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~-----------~~g-ViaGvg~~ 75 (288)
T 2nuw_A 18 NVDALKTHAKNLLEKGIDAIFVNGT----------TGLGPALSKDEKRQNLNALYDV-----------THK-LIFQVGSL 75 (288)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETST----------TTTGGGSCHHHHHHHHHHHTTT-----------CSC-EEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHH-----------hCC-eEEeeCCC
Confidence 677777877765 558999887443 4444444666666888877765 222 554444
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~ 98 (288)
T 2nuw_A 76 NLNDVMELVKFSNEMDILGVSSH 98 (288)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEc
Confidence 5678899999999 99999883
No 221
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=84.38 E-value=4.7 Score=34.39 Aligned_cols=96 Identities=7% Similarity=-0.053 Sum_probs=59.7
Q ss_pred CCceeEEee---cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCC
Q psy7344 114 MCGHSLMFC---GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHC 189 (240)
Q Consensus 114 ~~pvivqi~---g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~ 189 (240)
+.|+++-+- |++++...+.++.+++ |+.+|.|-=+-. + .|..+ .+.+...+-+++++++-..
T Consensus 76 ~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~-----~--~~k~l-~~~~e~~~~I~aa~~a~~~------ 141 (275)
T 2ze3_A 76 AIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATG-----L--TPTEL-YDLDSQLRRIEAARAAIDA------ 141 (275)
T ss_dssp SSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCS-----S--SSSCB-CCHHHHHHHHHHHHHHHHH------
T ss_pred CCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcC-----C--CCCcc-CCHHHHHHHHHHHHHhHhh------
Confidence 468888773 2478888887777755 899998876632 1 12333 5555555555555554100
Q ss_pred CCCCeeeEEeeeh---------------hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 190 DGNDINIGCPQMV---------------AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 190 ~~~~~pvsvK~r~---------------~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
..+|+.+.-|. +..++-++.+++ |||.|.+++..
T Consensus 142 --~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~~~ 191 (275)
T 2ze3_A 142 --SGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGIFVPLAL 191 (275)
T ss_dssp --HTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTTCC
T ss_pred --cCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 03455555552 234556677888 99999999965
No 222
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=84.21 E-value=3.4 Score=36.34 Aligned_cols=76 Identities=12% Similarity=-0.121 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-..+.-.++++. ... .++||.+-+.
T Consensus 45 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~vi~~-~~~-----------grvpViaGvg~~ 102 (344)
T 2hmc_A 45 DFDALVRKGKELIADGMSAVVYCGS----------MGDWPLLTDEQRMEGVER-LVK-----------AGIPVIVGTGAV 102 (344)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEESSG----------GGTGGGSCHHHHHHHHHH-HHH-----------TTCCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCcc----------CcChhhCCHHHHHHHHHH-HhC-----------CCCcEEEecCCC
Confidence 667777777765 558899877433 444444455555677776 222 3678887776
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 103 st~eai~la~~A~~~Gadavlv~ 125 (344)
T 2hmc_A 103 NTASAVAHAVHAQKVGAKGLMVI 125 (344)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC
Confidence 4677899999999 99999883
No 223
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=84.17 E-value=2.1 Score=38.19 Aligned_cols=86 Identities=17% Similarity=0.202 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecC------CCch--hhhhccccccccc-CCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINI------GCPQ--MVAKRGHYGAYLQ-DDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~------gCP~--~~~~~~g~G~~l~-~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
+++++.+.++.. +.|+++|.|.. |++. +...+ .+|.... .+++...++++++++++ +.++
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~-~~GG~~~~~~~~~~~e~v~avR~a~---------G~d~ 219 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNR-NYSGLLLADQLKMGEARIAAMREAM---------GDDA 219 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCG-GGGSCCCHHHHHHHHHHHHHHHHHH---------CSSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccc-cccCccchhHHHHHHHHHHHHHHhc---------CCCC
Confidence 888887766654 66999999985 5421 11111 1333221 24566678888888863 1356
Q ss_pred eeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 195 NIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 195 pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
++.+... .++..++++.|++ |+++|-
T Consensus 220 ~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE 250 (410)
T 2gl5_A 220 DIIVEIHSLLGTNSAIQFAKAIEKYRIFLYE 250 (410)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCeEE
Confidence 7776654 3567899999999 998763
No 224
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=83.94 E-value=6 Score=33.71 Aligned_cols=91 Identities=5% Similarity=-0.125 Sum_probs=63.2
Q ss_pred CCc-eeEEeecCCHHHHHHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCG-HSLMFCGNDSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~p-vivqi~g~d~~~~~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
..| +.+.|.+.+.++..+.++.+. .++|.||+=.=.-.. ..+.+.+.+.++.++...
T Consensus 38 g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~-----------~~~~~~v~~~l~~lr~~~---------- 96 (276)
T 3o1n_A 38 GAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFAN-----------VTTAESVLEAAGAIREII---------- 96 (276)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHHC----------
T ss_pred CCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccc-----------cCcHHHHHHHHHHHHHhc----------
Confidence 355 566888899999888888886 589999984442100 124477888888888761
Q ss_pred CCeeeEEeeeh-----------hcHHHHHHHHhC-C-CCeEEEeccc
Q psy7344 192 NDINIGCPQMV-----------AKRGHYGAYLQD-D-WPLLTELGKM 225 (240)
Q Consensus 192 ~~~pvsvK~r~-----------~~~~~~~~~l~~-G-~~~itih~R~ 225 (240)
.++|+.+-.|. +...++.+.+.+ | +++|.|--..
T Consensus 97 ~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~ 143 (276)
T 3o1n_A 97 TDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFT 143 (276)
T ss_dssp CSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG
T ss_pred CCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC
Confidence 26788888882 124566666677 8 8999986543
No 225
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=83.90 E-value=3.9 Score=35.39 Aligned_cols=79 Identities=8% Similarity=-0.066 Sum_probs=56.0
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.. . .++||.+-+.
T Consensus 26 D~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~--------~-grvpViaGvg~~ 86 (311)
T 3h5d_A 26 NFDAIPALIEHLLAHHTDGILLAGT----------TAESPTLTHDEELELFAAVQKVV--------N-GRVPLIAGVGTN 86 (311)
T ss_dssp CTTHHHHHHHHHHHTTCCCEEESST----------TTTGGGSCHHHHHHHHHHHHHHS--------C-SSSCEEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHh--------C-CCCcEEEeCCCc
Confidence 666777777776 558999988544 44444446666667777776651 1 3678888766
Q ss_pred -hhcHHHHHHHHhC-CC-CeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DW-PLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~-~~itih 222 (240)
..+++++++.+++ |+ |++.+.
T Consensus 87 ~t~~ai~la~~A~~~Ga~davlv~ 110 (311)
T 3h5d_A 87 DTRDSIEFVKEVAEFGGFAAGLAI 110 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEc
Confidence 5678899999999 97 999884
No 226
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=83.81 E-value=3.3 Score=37.84 Aligned_cols=78 Identities=17% Similarity=0.134 Sum_probs=52.3
Q ss_pred HHHHHHHccCCCEEEecCC----CchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcH
Q psy7344 130 TEAAKLAEPHCDGIDINIG----CPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKR 205 (240)
Q Consensus 130 ~~aa~~le~~~d~Idin~g----CP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~ 205 (240)
..+.+.++.|+|+|.++.| |-... ..+.| ..+.+.+.++...... .++||.+-..+.+.
T Consensus 286 ~~a~~~~~~Gad~I~vg~g~g~~~~tr~--~~~~~---~p~~~~l~~~~~~~~~------------~~ipvia~GGi~~~ 348 (491)
T 1zfj_A 286 EGARALYDAGVDVVKVGIGPGSICTTRV--VAGVG---VPQVTAIYDAAAVARE------------YGKTIIADGGIKYS 348 (491)
T ss_dssp HHHHHHHHTTCSEEEECSSCCTTBCHHH--HTCCC---CCHHHHHHHHHHHHHH------------TTCEEEEESCCCSH
T ss_pred HHHHHHHHcCCCEEEECccCCcceEEee--ecCCC---CCcHHHHHHHHHHHhh------------cCCCEEeeCCCCCH
Confidence 3444555679999999875 21111 11122 2467777777765433 46788887778888
Q ss_pred HHHHHHHhCCCCeEEEeccc
Q psy7344 206 GHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 206 ~~~~~~l~~G~~~itih~R~ 225 (240)
.++++++..||+++.+ ||.
T Consensus 349 ~di~kal~~GA~~v~v-G~~ 367 (491)
T 1zfj_A 349 GDIVKALAAGGNAVML-GSM 367 (491)
T ss_dssp HHHHHHHHTTCSEEEE-STT
T ss_pred HHHHHHHHcCCcceee-CHH
Confidence 8999988779999998 664
No 227
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=83.68 E-value=3.3 Score=35.89 Aligned_cols=79 Identities=11% Similarity=-0.013 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+.+ . .++||.+-+.
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~~~~~--------~-grvpViaGvg~s 91 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGN----------TGEFYALTIEEAKQVATRVTELV--------N-GRATVVAGIGYS 91 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSG----------GGTGGGSCHHHHHHHHHHHHHHH--------T-TSSEEEEEECSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------cCChhhCCHHHHHHHHHHHHHHh--------C-CCCeEEecCCcC
Confidence 667777777766 458899866322 44444446666667777666641 1 2578877665
Q ss_pred hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 ~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 92 t~~ai~la~~A~~~Gadavlv~ 113 (314)
T 3d0c_A 92 VDTAIELGKSAIDSGADCVMIH 113 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEC
Confidence 4566888999999 99999884
No 228
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=83.60 E-value=4.4 Score=35.95 Aligned_cols=71 Identities=11% Similarity=0.023 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++++.+.++.+ +.|++.|.|..|+ .+++...++++++++++ +.++++.+...
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~---------------~~~~~~~e~v~avr~a~---------g~~~~l~vDan~~ 220 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGG---------------APIEEDRMRIEAVLEEI---------GKDAQLAVDANGR 220 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSS---------------SCHHHHHHHHHHHHHHH---------TTTCEEEEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhc---------CCCCeEEEECCCC
Confidence 788887766654 6689999998885 24455556777777752 13456666544
Q ss_pred --hhcHHHHHHHHhC-CCCeE
Q psy7344 202 --VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 --~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 221 ~~~~~a~~~~~~l~~~~i~~i 241 (392)
T 1tzz_A 221 FNLETGIAYAKMLRDYPLFWY 241 (392)
T ss_dssp CCHHHHHHHHHHHTTSCCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCee
Confidence 3567899999999 99987
No 229
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=83.33 E-value=4.2 Score=36.51 Aligned_cols=90 Identities=12% Similarity=0.053 Sum_probs=60.0
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+.+.+++++.+.++.+ +.|+..+-+ .|++.... .....+++.-.+.++++++++ |.+
T Consensus 115 v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~av---------G~d 178 (405)
T 3rr1_A 115 MRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAF---------GNT 178 (405)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTT---------GGG
T ss_pred eeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHh---------CCC
Confidence 5666666667888888776654 669999999 88653210 001234555567777888762 135
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+++.+... .++..++++.|++ |+++|-
T Consensus 179 ~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 210 (405)
T 3rr1_A 179 VEFGLDFHGRVSAPMAKVLIKELEPYRPLFIE 210 (405)
T ss_dssp SEEEEECCSCBCHHHHHHHHHHHGGGCCSCEE
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 56666544 4567889999999 999883
No 230
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=83.31 E-value=5.5 Score=34.36 Aligned_cols=104 Identities=11% Similarity=-0.083 Sum_probs=65.9
Q ss_pred hHHHhhhcccCCCCceeEEeec--------CCH-HHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHH
Q psy7344 102 LLTELGFKTRSHMCGHSLMFCG--------NDS-KNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLT 171 (240)
Q Consensus 102 li~~i~~~~~~~~~pvivqi~g--------~d~-~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~ 171 (240)
.+.++....+....|+++.+.. .++ +....+++.+.+ |+|.|-++... . ++| +|+.+.
T Consensus 143 ~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~--~-----~~g-----~~~~~~ 210 (304)
T 1to3_A 143 MVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPL--Y-----GKG-----ARSDLL 210 (304)
T ss_dssp HHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGG--G-----GCS-----CHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCc--C-----CCC-----CHHHHH
Confidence 3444444434446788887642 134 666777888766 88988776541 1 122 889998
Q ss_pred HHHHHhhhccccccCCCCCCCCee-eEEeee--hhcHHHHHHHHhC-CCCeEEEeccccccc
Q psy7344 172 NLVYSPNMVHFVIAEPHCDGNDIN-IGCPQM--VAKRGHYGAYLQD-DWPLLTELGKMAMLV 229 (240)
Q Consensus 172 ~iv~~~~~~~~~i~~~~~~~~~~p-vsvK~r--~~~~~~~~~~l~~-G~~~itih~R~~~~~ 229 (240)
++++..... +.+| |.+=.- .+++.+.++.+.+ |++.+.+ ||+-.|.
T Consensus 211 ~vv~~~~~~-----------~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v-GRaI~q~ 260 (304)
T 1to3_A 211 TASQRLNGH-----------INMPWVILSSGVDEKLFPRAVRVAMEAGASGFLA-GRAVWSS 260 (304)
T ss_dssp HHHHHHHHT-----------CCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEE-SHHHHGG
T ss_pred HHHHhcccc-----------CCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEE-ehHHhCc
Confidence 998875553 3445 332222 3456666666677 9999999 9998875
No 231
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=83.22 E-value=2.6 Score=37.55 Aligned_cols=83 Identities=12% Similarity=0.027 Sum_probs=57.1
Q ss_pred CceeEEee-cCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCH-HHHHHHHHHhhhccccccCCCCCC
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDW-PLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p-~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
.|+...+. +++++++.+.++.+ +.|++.|.++. ||. |. ++ +...++++++++++ +
T Consensus 134 vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~---------G 191 (401)
T 2hzg_A 134 KRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGL---------G 191 (401)
T ss_dssp BEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHH---------C
T ss_pred eEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHh---------C
Confidence 56654444 56888888776655 66899999985 442 11 44 55567788887762 1
Q ss_pred CCeeeEEeee--h----hcHHHHHHHHhC-CCCeE
Q psy7344 192 NDINIGCPQM--V----AKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 192 ~~~pvsvK~r--~----~~~~~~~~~l~~-G~~~i 219 (240)
.++++.++.. + ++..++++.|++ |+++|
T Consensus 192 ~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~i 226 (401)
T 2hzg_A 192 PDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWL 226 (401)
T ss_dssp SSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEE
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 3677877765 5 345778999999 99987
No 232
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=83.09 E-value=5.6 Score=35.50 Aligned_cols=88 Identities=13% Similarity=0.065 Sum_probs=62.0
Q ss_pred CceeEEee---cCCHHHHHHHH-HH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCC
Q psy7344 115 CGHSLMFC---GNDSKNLTEAA-KL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHC 189 (240)
Q Consensus 115 ~pvivqi~---g~d~~~~~~aa-~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~ 189 (240)
.|+...+. ..+++++.+.+ +. +++|+..+-+..|++... ...+++.-.+.++++++++
T Consensus 126 v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~-------- 188 (393)
T 4dwd_A 126 LPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELL-------- 188 (393)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHH--------
T ss_pred eeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHh--------
Confidence 56666652 25788877766 54 466999999999975431 2457787778888888863
Q ss_pred CCCCeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 190 DGNDINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 190 ~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+.++++.+... .++..++++.|++ |+++|-
T Consensus 189 -g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 223 (393)
T 4dwd_A 189 -GPDAVIGFDANNGYSVGGAIRVGRALEDLGYSWFE 223 (393)
T ss_dssp -CTTCCEEEECTTCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred -CCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEE
Confidence 13556666554 3567889999999 998883
No 233
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=83.05 E-value=6 Score=33.63 Aligned_cols=96 Identities=7% Similarity=-0.010 Sum_probs=58.9
Q ss_pred ceeEEeecC--CHHHHHHHHHHHcc-CCCEEEecCCCchhhh-----hcccccccc--cCCHHHHHHHHHHhhhcccccc
Q psy7344 116 GHSLMFCGN--DSKNLTEAAKLAEP-HCDGIDINIGCPQMVA-----KRGHYGAYL--QDDWPLLTNLVYSPNMVHFVIA 185 (240)
Q Consensus 116 pvivqi~g~--d~~~~~~aa~~le~-~~d~Idin~gCP~~~~-----~~~g~G~~l--~~~p~~i~~iv~~~~~~~~~i~ 185 (240)
.++.=|..+ |.+.+.++++.+++ |+|.|+|+.=-..+.+ .+.. -.+| .-+.+.+-++++.+++..
T Consensus 21 ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~-~rAL~~G~~~~~~~~~v~~~r~~~---- 95 (271)
T 3nav_A 21 AFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGAN-LRALAAKTTPDICFELIAQIRARN---- 95 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHC----
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHH-HHHHHcCCCHHHHHHHHHHHHhcC----
Confidence 455555555 56788999998866 8999999743211211 1000 0001 134555556777776641
Q ss_pred CCCCCCCCeeeEEeeehh-----cHHHHHHHHhC-CCCeEEEe
Q psy7344 186 EPHCDGNDINIGCPQMVA-----KRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 186 ~~~~~~~~~pvsvK~r~~-----~~~~~~~~l~~-G~~~itih 222 (240)
.++|+.+-.-++ -+..|++.+.+ |+|++.+.
T Consensus 96 ------~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip 132 (271)
T 3nav_A 96 ------PETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA 132 (271)
T ss_dssp ------TTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET
T ss_pred ------CCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC
Confidence 467888754432 34779999999 99998884
No 234
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=83.04 E-value=2.5 Score=37.67 Aligned_cols=69 Identities=10% Similarity=-0.047 Sum_probs=50.0
Q ss_pred EEecCCCchhhhhcccccccccC-CHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEE
Q psy7344 143 IDINIGCPQMVAKRGHYGAYLQD-DWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 143 Idin~gCP~~~~~~~g~G~~l~~-~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~it 220 (240)
+++|+|||..... .+.. |++.+.++++.+++. ..|+.+++......+.++.+++ |+|.++
T Consensus 122 ~d~~~g~~~~~q~------~~~~~d~~~~~~~i~~~~~~------------g~~v~~~v~~~~~~e~a~~~~~agad~i~ 183 (393)
T 2qr6_A 122 GDQAAATRTLQEL------HAAPLDTELLSERIAQVRDS------------GEIVAVRVSPQNVREIAPIVIKAGADLLV 183 (393)
T ss_dssp HHHHHHHHHHHHH------HHSCCCHHHHHHHHHHHHHT------------TSCCEEEECTTTHHHHHHHHHHTTCSEEE
T ss_pred cCCCccchhhhhc------ccccCCHHHHHHHHHHHhhc------------CCeEEEEeCCccHHHHHHHHHHCCCCEEE
Confidence 3455677653211 1223 899999999988774 4578888886677888999988 999999
Q ss_pred Eeccccccc
Q psy7344 221 ELGKMAMLV 229 (240)
Q Consensus 221 ih~R~~~~~ 229 (240)
+|++...|.
T Consensus 184 i~~~~~~~~ 192 (393)
T 2qr6_A 184 IQGTLISAE 192 (393)
T ss_dssp EECSSCCSS
T ss_pred EeCCccccc
Confidence 998875444
No 235
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=82.70 E-value=2.5 Score=36.20 Aligned_cols=55 Identities=11% Similarity=-0.035 Sum_probs=38.5
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+.. |.- ...+.+.+.+-.+.+.++
T Consensus 69 r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~--P~y----------~~~s~~~l~~~f~~ia~a 124 (292)
T 2vc6_A 69 RVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS--PYY----------NKPTQEGIYQHFKAIDAA 124 (292)
T ss_dssp SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCS----------SCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC--CCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999998876 899999843 321 112455555555555555
No 236
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=82.52 E-value=4.6 Score=36.05 Aligned_cols=97 Identities=10% Similarity=0.011 Sum_probs=61.1
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhh------ccccccccc--CCHHHHHHHHHHhhhcccccc
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAK------RGHYGAYLQ--DDWPLLTNLVYSPNMVHFVIA 185 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~------~~g~G~~l~--~~p~~i~~iv~~~~~~~~~i~ 185 (240)
.|+...+.+.+++++.+.++.. ++|+..+-+..|++..... ...-|..+. .+.+...++++++++++
T Consensus 123 v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~---- 198 (401)
T 3sbf_A 123 IPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKY---- 198 (401)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH----
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHc----
Confidence 5665566678899888766654 6799999998886421100 000111110 11345556777887763
Q ss_pred CCCCCCCCeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 186 EPHCDGNDINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 186 ~~~~~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+.++++.+... .++..++++.|++ |+++|-
T Consensus 199 -----G~d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE 233 (401)
T 3sbf_A 199 -----GNQFHILHDVHERLFPNQAIQFAKEVEQYKPYFIE 233 (401)
T ss_dssp -----TTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE
T ss_pred -----CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 13567776655 4567899999999 999883
No 237
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=82.51 E-value=7 Score=32.32 Aligned_cols=82 Identities=10% Similarity=0.130 Sum_probs=52.0
Q ss_pred CceeEEeecC-CHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGN-DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~-d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.+..|+|+|- ++++. + .++.++|.|=+.+--+++. --+++.+++|++.+.
T Consensus 19 ~~M~VKICGit~~ed~-~---a~~~gaD~iGfIf~~~SpR----------~V~~~~A~~i~~~~~--------------- 69 (228)
T 4aaj_A 19 SHMFVKICGIKSLEEL-E---IVEKHADATGVVVNSNSKR----------RIPLEKAREIIENSA--------------- 69 (228)
T ss_dssp -CCEEEECCCCSHHHH-H---HHHTTCSEEEEECSSSSTT----------BCCHHHHHHHHHHCS---------------
T ss_pred CceEEEECCCCcHHHH-H---HHHcCCCEEEEEecCCCCC----------CCCHHHHHHHHHhhC---------------
Confidence 3467899984 55543 2 3456889988777522231 147899999887532
Q ss_pred eeeEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 194 INIGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 194 ~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.|+.+-.-..+..+.++.++. +.|.|.+||.-
T Consensus 70 ~~~~~v~v~v~~~ei~~~i~~~~ld~vQLHG~E 102 (228)
T 4aaj_A 70 IPVFLVSTMVGFSEWAMAIERTGAQYIQVHSNA 102 (228)
T ss_dssp SCEEEEECCCCHHHHHHHHHHHTCSEEEECSCC
T ss_pred CCCEEEeccCchHHHHHHHHhccchheeccccc
Confidence 233222222345677888888 99999999853
No 238
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=82.39 E-value=2.6 Score=36.42 Aligned_cols=84 Identities=11% Similarity=-0.032 Sum_probs=52.3
Q ss_pred CHHHHHH-HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh-
Q psy7344 125 DSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV- 202 (240)
Q Consensus 125 d~~~~~~-aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~- 202 (240)
+.+...+ +.+++++|+|.||||.-- .+-|+.-....+.+.+++..++... ..++|+|+-..-
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGgeS-------TrPga~~v~~~eE~~Rv~pvi~~l~---------~~~vpiSIDT~~~ 107 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGES-------TRPGAPPVPLDEELARVIPLVEALR---------PLNVPLSIDTYKP 107 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESSC-------CSTTCCCCCHHHHHHHHHHHHHHHG---------GGCSCEEEECCCH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCc-------CCCCCCCCCHHHHHHHHHHHHHHHh---------hCCCeEEEECCCH
Confidence 5555555 445567899999998731 1113333445666666666655530 026788887761
Q ss_pred --------------hc-----HHHHHHHHhC-CCCeEEEecc
Q psy7344 203 --------------AK-----RGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 203 --------------~~-----~~~~~~~l~~-G~~~itih~R 224 (240)
.+ ..++++.+.+ |+..|.+|.|
T Consensus 108 ~Va~aAl~aGa~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~ 149 (294)
T 2y5s_A 108 AVMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHML 149 (294)
T ss_dssp HHHHHHHHHTCSEEEETTTTCSTTHHHHHSSSSCEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECCCCCchHHHHHHHHhCCCEEEECCC
Confidence 11 2346777788 9999999976
No 239
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=82.25 E-value=7.1 Score=35.09 Aligned_cols=87 Identities=11% Similarity=-0.009 Sum_probs=59.1
Q ss_pred CceeEE-eecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLM-FCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivq-i~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.|+... +...+++++.+.++.+ +.|++.|.+..|+... . |. .+++...+.++++++++ +.
T Consensus 168 v~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~---d---g~---~~~~~die~v~avReav---------G~ 229 (412)
T 3stp_A 168 IPVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK---D---GM---PGMRENLKRVEAVREVI---------GY 229 (412)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG---G---HH---HHHHHHHHHHHHHHHHH---------CS
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc---c---cc---chHHHHHHHHHHHHHHc---------CC
Confidence 455554 2346888888876665 6699999999886421 0 11 24455567777777763 13
Q ss_pred CeeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 193 DINIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 193 ~~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
++++.+... .++..++++.|++ |+++|
T Consensus 230 d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~i 261 (412)
T 3stp_A 230 DNDLMLECYMGWNLDYAKRMLPKLAPYEPRWL 261 (412)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEE
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 567776655 4567889999999 99988
No 240
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=82.22 E-value=6.3 Score=33.50 Aligned_cols=76 Identities=9% Similarity=-0.044 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.=.++++.+.+. .+- |.+-+-
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~-----------~~g-vi~Gvg~~ 74 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGT----------TGLGPALSLQEKMELTDAATSA-----------ARR-VIVQVASL 74 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETST----------TTTGGGSCHHHHHHHHHHHHHH-----------CSS-EEEECCCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHH-----------hCC-EEEeeCCC
Confidence 677777877766 558999887433 4444444666666788877765 221 544444
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 75 ~t~~ai~la~~A~~~Gadavlv~ 97 (286)
T 2r91_A 75 NADEAIALAKYAESRGAEAVASL 97 (286)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEc
Confidence 5678899999999 99999883
No 241
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=82.22 E-value=3.2 Score=36.98 Aligned_cols=83 Identities=13% Similarity=0.153 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecC------CCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeE
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINI------GCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIG 197 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~------gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvs 197 (240)
+++++.+.++.+ +.|+++|.|.. |++... ...|.....+++...++++++++++ +.++++.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~g~~~~~~~~~~~e~v~avr~av---------G~d~~l~ 213 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV---FLEGPLPSETIKIGVERVEAIRNAV---------GPDVDII 213 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC---CCSSSCCHHHHHHHHHHHHHHHHHH---------CTTSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC---cccCCCchHHHHHHHHHHHHHHHHh---------CCCCeEE
Confidence 888887766654 66999999985 653211 1112111124455667888888763 1356777
Q ss_pred Eeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 198 CPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 198 vK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+... .++..++++.|++ |+++|
T Consensus 214 vDan~~~~~~~ai~~~~~l~~~~i~~i 240 (403)
T 2ox4_A 214 VENHGHTDLVSAIQFAKAIEEFNIFFY 240 (403)
T ss_dssp EECTTCSCHHHHHHHHHHHGGGCEEEE
T ss_pred EECCCCCCHHHHHHHHHHHHhhCCCEE
Confidence 6654 3567889999999 99876
No 242
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=82.15 E-value=8.7 Score=31.13 Aligned_cols=82 Identities=9% Similarity=0.017 Sum_probs=51.0
Q ss_pred eEEeec-CCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 118 SLMFCG-NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 118 ivqi~g-~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
.++|+| .++++...++ +.|+|.+-+.+--+++. + -+++.+++|.+.+... -.+|
T Consensus 3 ~vKICGit~~eda~~a~---~~GaD~iGfif~~~SpR-----~-----V~~~~a~~i~~~~~~~------------~~~V 57 (205)
T 1nsj_A 3 RVKICGITNLEDALFSV---ESGADAVGFVFYPKSKR-----Y-----ISPEDARRISVELPPF------------VFRV 57 (205)
T ss_dssp EEEECCCCSHHHHHHHH---HHTCSEEEEECCTTCTT-----B-----CCHHHHHHHHHHSCSS------------SEEE
T ss_pred cEEECCCCcHHHHHHHH---HcCCCEEEEEecCCCCC-----c-----CCHHHHHHHHHhCCCC------------CCEE
Confidence 368877 4555444333 44888888776422221 1 4789999998876432 1233
Q ss_pred EEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 197 GCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 197 svK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.| ..-.+..++.+.++. +.|.|.+||--
T Consensus 58 gV-fvn~~~~~i~~~~~~~~ld~vQLHG~e 86 (205)
T 1nsj_A 58 GV-FVNEEPEKILDVASYVQLNAVQLHGEE 86 (205)
T ss_dssp EE-ESSCCHHHHHHHHHHHTCSEEEECSCC
T ss_pred EE-EeCCCHHHHHHHHHhhCCCEEEECCCC
Confidence 33 112355677788888 99999999853
No 243
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=82.11 E-value=5 Score=35.67 Aligned_cols=32 Identities=6% Similarity=-0.158 Sum_probs=27.0
Q ss_pred CeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 193 DINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 193 ~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
++||.+-..+.+-.+.++++..|||++.+ ||.
T Consensus 278 ~ipvia~GGI~~g~Dv~KaLalGAdaV~i-g~~ 309 (365)
T 3sr7_A 278 KVEILASGGIRHPLDIIKALVLGAKAVGL-SRT 309 (365)
T ss_dssp TSEEEECSSCCSHHHHHHHHHHTCSEEEE-SHH
T ss_pred CCeEEEeCCCCCHHHHHHHHHcCCCEEEE-CHH
Confidence 57888877788889999999889999998 763
No 244
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.06 E-value=4.1 Score=35.27 Aligned_cols=79 Identities=10% Similarity=-0.018 Sum_probs=51.1
Q ss_pred CCHHHHHHHHH-HHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh---hccccccCCCCCCCCeeeEEe
Q psy7344 124 NDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN---MVHFVIAEPHCDGNDINIGCP 199 (240)
Q Consensus 124 ~d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~---~~~~~i~~~~~~~~~~pvsvK 199 (240)
.|.+...+.|+ ++++|+|.||||.|-+ .....+.+.+++..++ +. .++|+++-
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~------------~v~~~eem~rvv~~i~~~~~~-----------~~vpisID 90 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDG------------LLDARTEMTTFLNLIMSEPEI-----------ARVPVMID 90 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCT------------TSCHHHHHHHHHHHHHTCHHH-----------HTSCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCC------------CCCHHHHHHHHHHHHHHhhhc-----------CCCeEEEe
Confidence 45666666555 4577999999998721 1234566666666655 22 35677765
Q ss_pred ee--------h------------------hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 200 QM--------V------------------AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 200 ~r--------~------------------~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.. + +...++++.+.+ |+..|.+|-+.
T Consensus 91 T~~~~V~eaaL~~~~Ga~iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~ 143 (300)
T 3k13_A 91 SSKWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVMAFDE 143 (300)
T ss_dssp CSCHHHHHHHHHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESEET
T ss_pred CCCHHHHHHHHHhcCCCCEEEeCCcccCChhHHHHHHHHHHhCCeEEEEeeCC
Confidence 54 0 122367788888 99999999753
No 245
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=82.03 E-value=6.8 Score=33.45 Aligned_cols=76 Identities=13% Similarity=-0.078 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +.|++||-++-. +|....-.++.-.++++.+.+. .+- |.+-+-
T Consensus 18 D~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~eEr~~v~~~~~~~-----------~~g-viaGvg~~ 75 (293)
T 1w3i_A 18 DKEKLKIHAENLIRKGIDKLFVNGT----------TGLGPSLSPEEKLENLKAVYDV-----------TNK-IIFQVGGL 75 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHTT-----------CSC-EEEECCCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHH-----------cCC-EEEecCCC
Confidence 677777877766 558999887433 4444444666666888877765 222 544444
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 76 ~t~~ai~la~~A~~~Gadavlv~ 98 (293)
T 1w3i_A 76 NLDDAIRLAKLSKDFDIVGIASY 98 (293)
T ss_dssp CHHHHHHHHHHGGGSCCSEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCEEEEc
Confidence 5677899999999 99999884
No 246
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=81.93 E-value=2.3 Score=36.60 Aligned_cols=32 Identities=22% Similarity=0.111 Sum_probs=28.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEe
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDI 145 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idi 145 (240)
..|+++.+++++..+..+.++..++ |+|++.+
T Consensus 73 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 105 (300)
T 3eb2_A 73 RVPVVAGVASTSVADAVAQAKLYEKLGADGILA 105 (300)
T ss_dssp SSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4799999999999999999999876 8999998
No 247
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=81.80 E-value=2.3 Score=37.70 Aligned_cols=89 Identities=17% Similarity=0.099 Sum_probs=51.7
Q ss_pred CCceeE-EeecCCHHHHHHHHHHHccCCCEEEecCCCchh-hhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSL-MFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQM-VAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pviv-qi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~-~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.|+++ ++ .+++ .+.+..+.|+|+|.++.+ |-. .+.+.-.|. ...+++.+.++.+..+.
T Consensus 145 ~~~Vivg~v--~t~e---~A~~l~~aGaD~I~VG~~-~Gs~~~tr~~~g~-g~p~~~~i~~v~~~~~~------------ 205 (361)
T 3khj_A 145 NIDVIVGNV--VTEE---ATKELIENGADGIKVGIG-PGSICTTRIVAGV-GVPQITAIEKCSSVASK------------ 205 (361)
T ss_dssp CCEEEEEEE--CSHH---HHHHHHHTTCSEEEECSS-CCTTCCHHHHTCB-CCCHHHHHHHHHHHHHH------------
T ss_pred CCcEEEccC--CCHH---HHHHHHHcCcCEEEEecC-CCcCCCcccccCC-CCCcHHHHHHHHHHHhh------------
Confidence 456665 32 3333 333444568999999654 211 011110111 12567777777665443
Q ss_pred CCeeeEEeeehhcHHHHHHHHhCCCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQDDWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~G~~~iti 221 (240)
.++||.+-..+.+..++++++..||+++.+
T Consensus 206 ~~iPVIA~GGI~~~~di~kala~GAd~V~v 235 (361)
T 3khj_A 206 FGIPIIADGGIRYSGDIGKALAVGASSVMI 235 (361)
T ss_dssp HTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred cCCeEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 356777766677777787777779999987
No 248
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=81.62 E-value=4 Score=33.90 Aligned_cols=82 Identities=13% Similarity=0.076 Sum_probs=51.2
Q ss_pred CceeEEeecCCHHHHHHHHHHHcc-C--CCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEP-H--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~-~--~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
.|+++.+ |..++.++.+.+++ + ++.+.++... .. .+| |+ +++.+++. +
T Consensus 15 ~~~ilal---D~~~l~~~~~~~~~~~~~v~~~Kv~~d~--~~----~~G------~~----~v~~lr~~----------~ 65 (245)
T 1eix_A 15 SPVVVAL---DYHNRDDALAFVDKIDPRDCRLKVGKEM--FT----LFG------PQ----FVRELQQR----------G 65 (245)
T ss_dssp CCEEEEE---CCSSHHHHHHHHTTSCTTTCEEEEEHHH--HH----HHH------HH----HHHHHHHT----------T
T ss_pred CCeEEEE---CCCCHHHHHHHHHHhCccCcEEEEcHHH--HH----HhC------HH----HHHHHHHC----------C
Confidence 4666654 55556677777765 3 6777775552 11 112 23 44444443 1
Q ss_pred CCeeeEEeee-hhcH-HHHHHHHhC-CCCeEEEeccc
Q psy7344 192 NDINIGCPQM-VAKR-GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 192 ~~~pvsvK~r-~~~~-~~~~~~l~~-G~~~itih~R~ 225 (240)
..+++-+|+- +.++ ..+++.+.+ |+|.+|+|+=.
T Consensus 66 ~~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~ 102 (245)
T 1eix_A 66 FDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG 102 (245)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGG
T ss_pred CcEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 5788999998 3344 347888888 99999999754
No 249
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=81.58 E-value=1.6 Score=35.97 Aligned_cols=32 Identities=6% Similarity=-0.137 Sum_probs=23.2
Q ss_pred CCeeeEEeeehhcHHHHHHHHhCCCCeEEEec
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQDDWPLLTELG 223 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~ 223 (240)
+++|+.++..+.+..+..+.++.|||.+.+|.
T Consensus 73 ~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~ 104 (253)
T 1thf_D 73 IDIPFTVGGGIHDFETASELILRGADKVSINT 104 (253)
T ss_dssp CCSCEEEESSCCSHHHHHHHHHTTCSEEEESH
T ss_pred CCCCEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 67899999888666554444434999998854
No 250
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=81.34 E-value=10 Score=30.75 Aligned_cols=81 Identities=6% Similarity=-0.040 Sum_probs=50.4
Q ss_pred EEeec-CCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeE
Q psy7344 119 LMFCG-NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIG 197 (240)
Q Consensus 119 vqi~g-~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvs 197 (240)
++|+| .++++...++ +.|+|.+-+.+--+++. + -+++.+++|.+.+... -.+|.
T Consensus 3 vKICGit~~eda~~a~---~~GaD~iGfif~~~SpR-----~-----V~~~~a~~i~~~~~~~------------~~~Vg 57 (203)
T 1v5x_A 3 VKICGITRLEDALLAE---ALGAFALGFVLAPGSRR-----R-----IAPEAARAIGEALGPF------------VVRVG 57 (203)
T ss_dssp EEECCCCCHHHHHHHH---HHTCSEEEEECCTTCTT-----B-----CCHHHHHHHHHHSCSS------------SEEEE
T ss_pred EEEcCCCcHHHHHHHH---HcCCCEEEEEecCCCCC-----c-----CCHHHHHHHHHhCCCC------------CCEEE
Confidence 57877 4555444333 44888888775422221 1 4789999998876432 12333
Q ss_pred EeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 198 CPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 198 vK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
| ..-.+..++.+.++. +.|.|.+||--
T Consensus 58 V-fvn~~~~~i~~~~~~~~ld~vQLHG~e 85 (203)
T 1v5x_A 58 V-FRDQPPEEVLRLMEEARLQVAQLHGEE 85 (203)
T ss_dssp E-ESSCCHHHHHHHHHHTTCSEEEECSCC
T ss_pred E-EeCCCHHHHHHHHHhhCCCEEEECCCC
Confidence 3 112356677788888 99999999853
No 251
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=81.29 E-value=3 Score=34.47 Aligned_cols=86 Identities=7% Similarity=-0.051 Sum_probs=50.0
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
.++++.+--.+.++..+.++.+...++.+.++.+ .-.. +| |+.++++.+. .. ..+
T Consensus 13 ~~lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg~~--lf~~----~G------~~~v~~l~~~--~g-----------~~v 67 (228)
T 3m47_A 13 NRLILAMDLMNRDDALRVTGEVREYIDTVKIGYP--LVLS----EG------MDIIAEFRKR--FG-----------CRI 67 (228)
T ss_dssp GGEEEECCCCSHHHHHHHHHTTTTTCSEEEEEHH--HHHH----HC------THHHHHHHHH--HC-----------CEE
T ss_pred CCeEEEeCCCCHHHHHHHHHHcCCcccEEEEcHH--HHHh----cC------HHHHHHHHhc--CC-----------CeE
Confidence 3566664334444444444444334788888654 2211 12 3344444331 12 466
Q ss_pred eeEEeee-hhcH-HHHHHHHhC-CCCeEEEeccc
Q psy7344 195 NIGCPQM-VAKR-GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 195 pvsvK~r-~~~~-~~~~~~l~~-G~~~itih~R~ 225 (240)
++-+|+- +.+| ..+++.+.+ |+|.+|+|+=.
T Consensus 68 ~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~ 101 (228)
T 3m47_A 68 IADFKVADIPETNEKICRATFKAGADAIIVHGFP 101 (228)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTT
T ss_pred EEEEeecccHhHHHHHHHHHHhCCCCEEEEeccC
Confidence 7888888 5554 568888888 99999999854
No 252
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=81.24 E-value=3 Score=36.19 Aligned_cols=55 Identities=5% Similarity=-0.086 Sum_probs=38.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.-. ..+.+.+.+-.+.+.++
T Consensus 93 rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~----------~~s~~~l~~~f~~va~a 148 (315)
T 3na8_A 93 RVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVL--PISYW----------KLNEAEVFQHYRAVGEA 148 (315)
T ss_dssp SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEC--CCCSS----------CCCHHHHHHHHHHHHHH
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCCC----------CCCHHHHHHHHHHHHHh
Confidence 4799999988999999999998876 89999983 34321 12445555555555555
No 253
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=81.10 E-value=13 Score=31.23 Aligned_cols=90 Identities=11% Similarity=0.031 Sum_probs=60.4
Q ss_pred CCc-eeEEeecCCHHHHHHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCG-HSLMFCGNDSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~p-vivqi~g~d~~~~~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
..| +.+.|.+.+.+++.+.++.+. .++|.||+=.=+-.. ..+++.+.+.+..++...
T Consensus 18 g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~-----------~~~~~~v~~~l~~lr~~~---------- 76 (258)
T 4h3d_A 18 GRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFEN-----------VENIKEVKEVLYELRSYI---------- 76 (258)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHHC----------
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccc-----------cCCHHHHHHHHHHHHHhc----------
Confidence 356 566788889999887777665 489999984442100 246788888888888762
Q ss_pred CCeeeEEeeeh-----------hcHHHHHHHHhC-C-CCeEEEecc
Q psy7344 192 NDINIGCPQMV-----------AKRGHYGAYLQD-D-WPLLTELGK 224 (240)
Q Consensus 192 ~~~pvsvK~r~-----------~~~~~~~~~l~~-G-~~~itih~R 224 (240)
.++|+.+-.|. +...++.+.+.. | +|+|-+--.
T Consensus 77 ~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~ 122 (258)
T 4h3d_A 77 HDIPLLFTFRSVVEGGEKLISRDYYTTLNKEISNTGLVDLIDVELF 122 (258)
T ss_dssp TTSCEEEECCCGGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGG
T ss_pred CCCCEEEEEechhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhhh
Confidence 36899888882 123444455544 4 888877543
No 254
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=80.91 E-value=3.2 Score=35.60 Aligned_cols=55 Identities=9% Similarity=-0.146 Sum_probs=39.6
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.-. ..+.+.+.+-.+++.++
T Consensus 69 rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~----------~~s~~~l~~~f~~va~a 124 (297)
T 2rfg_A 69 RVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCV--AGYYN----------RPSQEGLYQHFKMVHDA 124 (297)
T ss_dssp SSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEEC--CCTTT----------CCCHHHHHHHHHHHHHH
T ss_pred CCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEc--CCCCC----------CCCHHHHHHHHHHHHHh
Confidence 4799999988899999999998876 89999984 34321 12455665666666655
No 255
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=80.85 E-value=4.6 Score=35.89 Aligned_cols=71 Identities=14% Similarity=0.111 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++++.+.++.+ +.|+++|.+..|- .+++...++++++++++ +.++++.+...
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~av---------g~d~~l~vDan~~ 217 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHL---------GDAVPLMVDANQQ 217 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHH---------CTTSCEEEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHc---------CCCCEEEEECCCC
Confidence 788888776655 5689999997651 24666667788888763 13566666544
Q ss_pred --hhcHHHHHHHHhC-CCCeE
Q psy7344 202 --VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 --~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 218 ~~~~~a~~~~~~l~~~~i~~i 238 (393)
T 2og9_A 218 WDRPTAQRMCRIFEPFNLVWI 238 (393)
T ss_dssp CCHHHHHHHHHHHGGGCCSCE
T ss_pred CCHHHHHHHHHHHHhhCCCEE
Confidence 3567899999999 99987
No 256
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=80.82 E-value=3.5 Score=35.26 Aligned_cols=55 Identities=7% Similarity=-0.202 Sum_probs=39.9
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.- ...+.+.+.+-.+++.++
T Consensus 70 r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y----------~~~s~~~l~~~f~~ia~a 125 (292)
T 2ojp_A 70 RIPVIAGTGANATAEAISLTQRFNDSGIVGCLTV--TPYY----------NRPSQEGLYQHFKAIAEH 125 (292)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEE--CCCS----------SCCCHHHHHHHHHHHHTT
T ss_pred CCcEEEecCCccHHHHHHHHHHHHhcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999999877 89999884 2332 113556666666666665
No 257
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=80.82 E-value=2.4 Score=37.01 Aligned_cols=82 Identities=11% Similarity=0.090 Sum_probs=50.0
Q ss_pred CHHHHHH-HHHHHccCCCEEEecCCCchhhhhccccccccc---CCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEee
Q psy7344 125 DSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQ---DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQ 200 (240)
Q Consensus 125 d~~~~~~-aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~---~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~ 200 (240)
+++...+ +.+++++|+|.||||.-- .+. |+.-. ..++.+..+++++++. .++|+|+-.
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeS-----TrP--Ga~~v~~~eE~~Rv~pvI~~l~~~-----------~~vpiSIDT 92 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGES-----TRP--GSSYVEIEEEIQRVVPVIKAIRKE-----------SDVLISIDT 92 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------------CHHHHHHHHHHHHHHHHHHHHH-----------CCCEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCc-----CCC--CCCCCCHHHHHHHHHHHHHHHHhh-----------CCceEEEeC
Confidence 4555554 444557799999998731 111 11111 3445555566667665 578999877
Q ss_pred eh---------------hc------HHHHHHHHhC-CCCeEEEecc
Q psy7344 201 MV---------------AK------RGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 201 r~---------------~~------~~~~~~~l~~-G~~~itih~R 224 (240)
.- .+ ..++++.+.+ |+..+.+|.|
T Consensus 93 ~~~~Va~aAl~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvlmh~~ 138 (314)
T 2vef_A 93 WKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNP 138 (314)
T ss_dssp SCHHHHHHHHHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEEECCH
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCChHHHHHHHHcCCCEEEEecC
Confidence 61 11 1357777788 9999999986
No 258
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=80.77 E-value=4.7 Score=32.55 Aligned_cols=85 Identities=9% Similarity=-0.013 Sum_probs=48.8
Q ss_pred ceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 116 GHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
++++.+--.+.++..+.++.+...++.++++.+. -.+ +| |+.++.+ ++.. .+.+++
T Consensus 5 ~~ilalD~~~~~~~~~~~~~~~~~v~~~kv~~~~--f~~----~G------~~~i~~l----~~~~--------p~~~v~ 60 (216)
T 1q6o_A 5 MLQVALDNQTMDSAYETTRLIAEEVDIIEVGTIL--CVG----EG------VRAVRDL----KALY--------PHKIVL 60 (216)
T ss_dssp EEEEEECCSSHHHHHHHHHHHGGGCSEEEECHHH--HHH----HC------THHHHHH----HHHC--------TTSEEE
T ss_pred CeEEEECCCCHHHHHHHHHHhcccCCEEEECHHH--HHH----hC------HHHHHHH----HHhC--------CCCeEE
Confidence 3444443345555555555555556888887762 111 12 3344444 3320 014677
Q ss_pred eEEeeehhcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 196 IGCPQMVAKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r~~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+-+|+-. ....+++.+.+ |+|.||+|+-.
T Consensus 61 lD~kl~d-ip~t~~~~~~~~Gad~itvh~~~ 90 (216)
T 1q6o_A 61 ADAKIAD-AGKILSRMCFEANADWVTVICCA 90 (216)
T ss_dssp EEEEECS-CHHHHHHHHHHTTCSEEEEETTS
T ss_pred EEEEecc-cHHHHHHHHHhCCCCEEEEeccC
Confidence 8888872 34445567778 99999999854
No 259
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=80.63 E-value=4.7 Score=33.27 Aligned_cols=81 Identities=9% Similarity=-0.016 Sum_probs=49.1
Q ss_pred ceeEEeecCCHHHHHHHHHHHcc-C--CCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 116 GHSLMFCGNDSKNLTEAAKLAEP-H--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~le~-~--~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
++++. -|..++.++.+.+++ + ++.+.++..- .. .+| |+. ++.+++. +.
T Consensus 5 ~lila---lD~~~l~~~~~~~~~~~~~v~~~Kv~~d~--~~----~~G------~~~----v~~l~~~----------~~ 55 (239)
T 1dbt_A 5 LPIIA---LDFASAEETLAFLAPFQQEPLFVKVGMEL--FY----QEG------PSI----VKQLKER----------NC 55 (239)
T ss_dssp SCEEE---CCCSSHHHHHHHTGGGTTSCCEEEECHHH--HH----HHT------HHH----HHHHHHT----------TC
T ss_pred CEEEE---eCCCCHHHHHHHHHHhcccCcEEEECHHH--HH----HhC------HHH----HHHHHHC----------CC
Confidence 45555 355556667777765 3 4777665541 11 112 333 3444442 15
Q ss_pred CeeeEEeee-hhcH-HHHHHHHhC-CCCeEEEeccc
Q psy7344 193 DINIGCPQM-VAKR-GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 193 ~~pvsvK~r-~~~~-~~~~~~l~~-G~~~itih~R~ 225 (240)
.+++-+|+- +.+| ..+++.+.+ |+|.+|+|+=.
T Consensus 56 ~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~~ 91 (239)
T 1dbt_A 56 ELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAG 91 (239)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG
T ss_pred cEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCcC
Confidence 678899998 3344 347888889 99999999754
No 260
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=80.58 E-value=3.1 Score=35.76 Aligned_cols=55 Identities=9% Similarity=-0.073 Sum_probs=39.0
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+-. |.- ...+.+.+.+-.+.+.++
T Consensus 81 rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~--P~y----------~~~s~~~l~~~f~~va~a 136 (301)
T 1xky_A 81 RVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVA--PYY----------NKPSQEGMYQHFKAIAES 136 (301)
T ss_dssp SSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC--CCS----------SCCCHHHHHHHHHHHHHT
T ss_pred CceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcC--CCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999998876 899999842 321 112455665666666555
No 261
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=80.54 E-value=7.5 Score=34.38 Aligned_cols=82 Identities=12% Similarity=0.022 Sum_probs=57.7
Q ss_pred CceeEEeecCCHHHHHHHHH-HHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~-~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.|+...+...+++++.+.++ .+++ |+..+-+..|+ .+++.-.+.++++++++ +.
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avR~a~---------g~ 193 (383)
T 3i4k_A 138 VDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGA---------------GDPAEDTRRVAELAREV---------GD 193 (383)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCS---------------SCHHHHHHHHHHHHHTT---------TT
T ss_pred EEEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCC---------------CCHHHHHHHHHHHHHHc---------CC
Confidence 45555566678888766544 5676 89999988874 25555567788888762 13
Q ss_pred CeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 193 DINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 193 ~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
++++.+... .++..++++.|++ |+++|-
T Consensus 194 ~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE 226 (383)
T 3i4k_A 194 RVSLRIDINARWDRRTALHYLPILAEAGVELFE 226 (383)
T ss_dssp TSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 567777655 3567889999999 999883
No 262
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=80.49 E-value=3.1 Score=35.99 Aligned_cols=82 Identities=15% Similarity=0.094 Sum_probs=50.0
Q ss_pred CHHHHHHHHH-HHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHH---HHhhhccccccCCCCCCCCeeeEEee
Q psy7344 125 DSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV---YSPNMVHFVIAEPHCDGNDINIGCPQ 200 (240)
Q Consensus 125 d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv---~~~~~~~~~i~~~~~~~~~~pvsvK~ 200 (240)
|.+...+.++ ++++|+|.||||.-- .+. |+.-....|.+++++ +++++. .++|+++-.
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeS-----trP--ga~~v~~~eE~~RvvpvI~~l~~~-----------~~vpiSIDT 122 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGES-----TRP--GFAKVSVEEEIKRVVPMIQAVSKE-----------VKLPISIDT 122 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC-----------CCCCCHHHHHHHHHHHHHHHHHH-----------SCSCEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCc-----CCC--CCCCCCHHHHHHHHHHHHHHHHhc-----------CCceEEEeC
Confidence 3455555444 456799999998641 112 222233455565555 666654 577888876
Q ss_pred eh---------------h-----c-HHHHHHHHhC-CCCeEEEecc
Q psy7344 201 MV---------------A-----K-RGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 201 r~---------------~-----~-~~~~~~~l~~-G~~~itih~R 224 (240)
.- . . ..++++.+.+ |+..+.+|.|
T Consensus 123 ~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~ 168 (297)
T 1tx2_A 123 YKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNR 168 (297)
T ss_dssp SCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCC
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCC
Confidence 60 1 1 2456777788 9999999975
No 263
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=80.48 E-value=3.4 Score=33.59 Aligned_cols=68 Identities=16% Similarity=0.186 Sum_probs=45.0
Q ss_pred eeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHH
Q psy7344 96 LQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVY 175 (240)
Q Consensus 96 l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~ 175 (240)
...||+++..+. . ...|+++- +|=+++...++.+.+ ++.|||+|.|= . . ..| .+|+++++++++
T Consensus 137 ~~fdw~~l~~~~-~---~~~p~~LA-GGL~peNV~~ai~~~--~p~gVDvsSGv--E-~-~pG-----~KD~~ki~~fi~ 200 (205)
T 1nsj_A 137 KTFDWSLILPYR-D---RFRYLVLS-GGLNPENVRSAIDVV--RPFAVDVSSGV--E-A-FPG-----KKDHDSIKMFIK 200 (205)
T ss_dssp SCCCGGGTGGGG-G---GSSCEEEE-SSCCTTTHHHHHHHH--CCSEEEESGGG--E-E-ETT-----EECHHHHHHHHH
T ss_pred CccCHHHHHhhh-c---CCCcEEEE-CCCCHHHHHHHHHhc--CCCEEEECCce--e-c-CCC-----CcCHHHHHHHHH
Confidence 345898887642 1 13576543 334888877776665 57899999981 1 0 122 389999999999
Q ss_pred Hhhh
Q psy7344 176 SPNM 179 (240)
Q Consensus 176 ~~~~ 179 (240)
+++.
T Consensus 201 ~~r~ 204 (205)
T 1nsj_A 201 NAKG 204 (205)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 8764
No 264
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=80.45 E-value=2.6 Score=37.45 Aligned_cols=87 Identities=7% Similarity=0.034 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHH-ccCCCEEEecCCCchhhhh--cccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEee
Q psy7344 124 NDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAK--RGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQ 200 (240)
Q Consensus 124 ~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~--~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~ 200 (240)
.+++++.+.++.+ +.|+++|.|..||...... +.-+|.....+++...++++++++++ +.++++.+..
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~---------G~d~~l~vD~ 206 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAA---------GPEIELMVDL 206 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHH---------CTTSEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhc---------CCCCEEEEEC
Confidence 5788887766554 6699999999886432000 00011111235566677888888863 1356777665
Q ss_pred e----hhcHHHHHHHHhC-CCCeE
Q psy7344 201 M----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 201 r----~~~~~~~~~~l~~-G~~~i 219 (240)
. .++.+++++.|++ |+++|
T Consensus 207 n~~~~~~~a~~~~~~l~~~~i~~i 230 (392)
T 2poz_A 207 SGGLTTDETIRFCRKIGELDICFV 230 (392)
T ss_dssp TTCSCHHHHHHHHHHHGGGCEEEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEE
Confidence 4 3567889999999 98876
No 265
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=80.33 E-value=7.2 Score=33.82 Aligned_cols=79 Identities=11% Similarity=-0.029 Sum_probs=51.9
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+-..+..++++++.+.++.+ +.|++.|.+..|. +++.-.+++++++++ | .+
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~------g----~~ 182 (345)
T 2zad_A 129 IETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------NLKEDIEAVEEIAKV------T----RG 182 (345)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHH------S----TT
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------CHHHHHHHHHHHHhh------C----CC
Confidence 4554455557888887766654 6689999997773 344444566766664 1 34
Q ss_pred eeeEE--eee--hhcHHHHHHHHhC-CCC--eE
Q psy7344 194 INIGC--PQM--VAKRGHYGAYLQD-DWP--LL 219 (240)
Q Consensus 194 ~pvsv--K~r--~~~~~~~~~~l~~-G~~--~i 219 (240)
+++.+ +.+ .++..++++.|++ |++ +|
T Consensus 183 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~i 215 (345)
T 2zad_A 183 AKYIVDANMGYTQKEAVEFARAVYQKGIDIAVY 215 (345)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCeeee
Confidence 44444 333 3567889999999 999 76
No 266
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=80.20 E-value=3.1 Score=37.04 Aligned_cols=78 Identities=14% Similarity=0.086 Sum_probs=47.9
Q ss_pred HHHHHccCCCEEEecCCCchh-hhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHH
Q psy7344 132 AAKLAEPHCDGIDINIGCPQM-VAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGA 210 (240)
Q Consensus 132 aa~~le~~~d~Idin~gCP~~-~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~ 210 (240)
+.+..+.|+|+|.++.| |-. .+.+...+. ...+.+.+.++.+..+. .++||.+-..+.+..++++
T Consensus 163 A~~a~~aGAD~I~vG~g-pGs~~~tr~~~g~-g~p~~~~l~~v~~~~~~------------~~iPVIA~GGI~~~~di~k 228 (366)
T 4fo4_A 163 ARALIEAGVSAVKVGIG-PGSICTTRIVTGV-GVPQITAIADAAGVANE------------YGIPVIADGGIRFSGDISK 228 (366)
T ss_dssp HHHHHHHTCSEEEECSS-CSTTBCHHHHHCC-CCCHHHHHHHHHHHHGG------------GTCCEEEESCCCSHHHHHH
T ss_pred HHHHHHcCCCEEEEecC-CCCCCCcccccCc-ccchHHHHHHHHHHHhh------------cCCeEEEeCCCCCHHHHHH
Confidence 33344559999999644 211 011110111 12456677777665433 4678888777777788888
Q ss_pred HHhCCCCeEEEec
Q psy7344 211 YLQDDWPLLTELG 223 (240)
Q Consensus 211 ~l~~G~~~itih~ 223 (240)
++..||+++.+-.
T Consensus 229 ala~GAd~V~vGs 241 (366)
T 4fo4_A 229 AIAAGASCVMVGS 241 (366)
T ss_dssp HHHTTCSEEEEST
T ss_pred HHHcCCCEEEECh
Confidence 8888999999843
No 267
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=80.03 E-value=5.7 Score=37.36 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=53.2
Q ss_pred CHHHHHHHH-HHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh-
Q psy7344 125 DSKNLTEAA-KLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV- 202 (240)
Q Consensus 125 d~~~~~~aa-~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~- 202 (240)
|.+...+.+ +++++|+|.||||.|- .....++.+++++..+++. .++|+++-..-
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIgpg~------------~~v~~~ee~~rvv~~i~~~-----------~~vpisIDT~~~ 394 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVNFGI------------ESQIDVRYVEKIVQTLPYV-----------SNVPLSLDIQNV 394 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECSS------------GGGSCHHHHHHHHHHHHHH-----------TCSCEEEECCCH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCC------------CCCCHHHHHHHHHHHHHhh-----------CCceEEEeCCCH
Confidence 344444434 4557799999999552 1236788888888888765 56777776650
Q ss_pred -----------------------hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 203 -----------------------AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 203 -----------------------~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+...++++.+.+ |+..|.+|.+-
T Consensus 395 ~v~eaal~~~~G~~iINdis~~~~~~~~~~~~~~~~g~~vV~m~~~~ 441 (566)
T 1q7z_A 395 DLTERALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGK 441 (566)
T ss_dssp HHHHHHHHHCSSCCEEEEEESCHHHHHHHHHHHHHHCCEEEEESCSS
T ss_pred HHHHHHHHhcCCCCEEEECCcchhhHHHHHHHHHHhCCeEEEEeCCC
Confidence 112566777788 99999999774
No 268
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=79.87 E-value=3.5 Score=34.19 Aligned_cols=65 Identities=20% Similarity=0.269 Sum_probs=46.0
Q ss_pred eCChhhHHHhhhcccCCCCceeEEeecC-CHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHH
Q psy7344 97 QDDWPLLTELGFKTRSHMCGHSLMFCGN-DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVY 175 (240)
Q Consensus 97 ~~d~eli~~i~~~~~~~~~pvivqi~g~-d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~ 175 (240)
+.||+++..+.. ..|++ |.|+ +++...++.+.+. ..+||+|.|= ... | .+|+++++++++
T Consensus 161 ~fDW~~~~~~~~-----~~p~i--LAGGL~peNV~~Ai~~~~--P~gVDVsSGV-----Es~--G---~KD~~KI~~Fi~ 221 (228)
T 4aaj_A 161 LHDLRVSSLVAR-----KIPVI--VAGGLNAENVEEVIKVVK--PYGVDVSSGV-----EKY--G---IKDPKLVEEFVR 221 (228)
T ss_dssp -CCCHHHHHHHH-----HSCEE--EESSCCTTTHHHHHHHHC--CSEEEESGGG-----EET--T---EECHHHHHHHHH
T ss_pred cCChHHHHHhhh-----cCCeE--EECCCCHHHHHHHHHHhC--CCEEEeCCCC-----CCC--C---CcCHHHHHHHHH
Confidence 458998877643 24765 4454 8888888877664 5699999981 112 2 389999999999
Q ss_pred Hhhhc
Q psy7344 176 SPNMV 180 (240)
Q Consensus 176 ~~~~~ 180 (240)
+++..
T Consensus 222 ~vr~v 226 (228)
T 4aaj_A 222 RAKNV 226 (228)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 98865
No 269
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=79.77 E-value=3.5 Score=35.93 Aligned_cols=84 Identities=10% Similarity=-0.105 Sum_probs=51.9
Q ss_pred CCHHHHHHHHH-HHccCCCEEEecCCCchhhhhccccccc----ccCCHHH---HHHHHHHhhhccccccCCCCCCCCee
Q psy7344 124 NDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAY----LQDDWPL---LTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 124 ~d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~----l~~~p~~---i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
.+.+...+.++ ++++|+|.||||.- . .+. |+. .....+. +..+++++++. .++|
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGge-S----TrP--ga~~~~~~V~~~eE~~Rv~pvI~~l~~~-----------~~vp 107 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGE-A----TNP--FVDIKTDSPSTQIELDRLLPVIDAIKKR-----------FPQL 107 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC-C----SCT--TC-----CHHHHHHHHHHHHHHHHHHHH-----------CCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCC-C----CCC--CcccccCCCCHHHHHHHHHHHHHHHHhh-----------CCCe
Confidence 46676666544 56789999999853 1 111 221 1122333 45556666665 5789
Q ss_pred eEEeeeh---------------h-----cHHHHHHHHhC-CCCeEEEeccc
Q psy7344 196 IGCPQMV---------------A-----KRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r~---------------~-----~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+|+-..- . ...++++.+.+ |+..|.+|.|.
T Consensus 108 ISIDT~~~~Va~aAl~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G 158 (314)
T 3tr9_A 108 ISVDTSRPRVMREAVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPS 158 (314)
T ss_dssp EEEECSCHHHHHHHHHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCC
T ss_pred EEEeCCCHHHHHHHHHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCC
Confidence 9998871 1 12357777788 99999999763
No 270
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=79.70 E-value=3.3 Score=36.20 Aligned_cols=81 Identities=12% Similarity=-0.049 Sum_probs=47.1
Q ss_pred CHHHHHH-HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHH---HHHhhhccccccCCCCCCC-CeeeEEe
Q psy7344 125 DSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNL---VYSPNMVHFVIAEPHCDGN-DINIGCP 199 (240)
Q Consensus 125 d~~~~~~-aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~i---v~~~~~~~~~i~~~~~~~~-~~pvsvK 199 (240)
+.+...+ +.+++++|+|.||||.-- .+. | .-....|.++++ ++++++. . ++|+|+-
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeS-----TrP--G-~~v~~~eEl~Rv~pvI~~l~~~-----------~~~vpISID 123 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVK-----AGP--G-ERVDVDTEITRLVPFIEWLRGA-----------YPDQLISVD 123 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC------------------CHHHHHHHHHHHHHHHHHH-----------STTCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCc-----CCC--C-CCCCHHHHHHHHHHHHHHHHhh-----------CCCCeEEEe
Confidence 4555554 445567899999998641 111 1 112345555555 6666654 3 7899987
Q ss_pred eeh---------------hc-----HHHHHHHHhC-CCCeEEEecc
Q psy7344 200 QMV---------------AK-----RGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 200 ~r~---------------~~-----~~~~~~~l~~-G~~~itih~R 224 (240)
..- .+ ..++++.+.+ |+..+.+|.|
T Consensus 124 T~~~~VaeaAl~aGa~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~ 169 (318)
T 2vp8_A 124 TWRAQVAKAACAAGADLINDTWGGVDPAMPEVAAEFGAGLVCAHTG 169 (318)
T ss_dssp CSCHHHHHHHHHHTCCEEEETTSSSSTTHHHHHHHHTCEEEEECC-
T ss_pred CCCHHHHHHHHHhCCCEEEECCCCCchHHHHHHHHhCCCEEEECCC
Confidence 771 11 2357777788 9999999965
No 271
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=79.68 E-value=3.8 Score=36.65 Aligned_cols=84 Identities=13% Similarity=0.043 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccc-cCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee
Q psy7344 124 NDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYL-QDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM 201 (240)
Q Consensus 124 ~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l-~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r 201 (240)
.+++++.+.++. ++.|+..+-+..|++.. +..|... ..+++.-.+.++++++++ +.++++.+...
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~----~~~g~~~~~~~~~~d~~~v~avR~a~---------G~d~~l~vDan 216 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYT----IYDGHQPSLEDLERSEAFCKQIRAAV---------GTKADLLFGTH 216 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCB----TTCSBCCCHHHHHHHHHHHHHHHHHH---------GGGSEEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCc----ccccccccHHHHHHHHHHHHHHHHHc---------CCCCeEEEeCC
Confidence 477887776555 46699999999997643 1112111 123556667778888763 13557776655
Q ss_pred ----hhcHHHHHHHHhC-CCCeEE
Q psy7344 202 ----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 202 ----~~~~~~~~~~l~~-G~~~it 220 (240)
.++..++++.|++ |+++|-
T Consensus 217 ~~~~~~~A~~~~~~l~~~~i~~iE 240 (404)
T 4e5t_A 217 GQFTVSGAKRLARRLEAYDPLWFE 240 (404)
T ss_dssp SCBCHHHHHHHHHHHGGGCCSEEE
T ss_pred CCcCHHHHHHHHHHHhhcCCcEEE
Confidence 3567889999999 999884
No 272
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=79.64 E-value=3.5 Score=35.53 Aligned_cols=55 Identities=13% Similarity=-0.054 Sum_probs=39.3
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.- ...+.+.+.+-.+++.++
T Consensus 81 rvpViaGvg~~st~~ai~la~~A~~~Gadavlv~--~P~y----------~~~s~~~l~~~f~~va~a 136 (306)
T 1o5k_A 81 KIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVV--TPYY----------NKPTQEGLYQHYKYISER 136 (306)
T ss_dssp SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE--CCCS----------SCCCHHHHHHHHHHHHTT
T ss_pred CCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999998876 89999984 2331 112456665666666555
No 273
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=79.63 E-value=2.7 Score=35.97 Aligned_cols=55 Identities=13% Similarity=-0.037 Sum_probs=38.3
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.- ...+.+.+.+-.+++.++
T Consensus 69 rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y----------~~~s~~~l~~~f~~va~a 124 (294)
T 2ehh_A 69 RIKVIAGTGGNATHEAVHLTAHAKEVGADGALVV--VPYY----------NKPTQRGLYEHFKTVAQE 124 (294)
T ss_dssp SSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE--CCCS----------SCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4789999988899999999998876 89999984 2331 112455555555555555
No 274
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=79.55 E-value=3.2 Score=35.79 Aligned_cols=55 Identities=11% Similarity=-0.068 Sum_probs=40.1
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.- ...+.+.+.+-.+.+.++
T Consensus 84 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y----------~~~s~~~l~~~f~~va~a 139 (304)
T 3l21_A 84 RARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVV--TPYY----------SKPPQRGLQAHFTAVADA 139 (304)
T ss_dssp TSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE--CCCS----------SCCCHHHHHHHHHHHHTS
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4699999988999999999999876 89999984 2332 113556666666666665
No 275
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=79.55 E-value=3.6 Score=35.98 Aligned_cols=55 Identities=9% Similarity=-0.176 Sum_probs=39.3
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..||++.+++++..+..+.++..++ |+|+|.+- .|.- ...+.+.+.+-.+.+.++
T Consensus 103 rvpViaGvg~~st~eai~la~~A~~~Gadavlv~--~P~Y----------~~~s~~~l~~~f~~VA~a 158 (332)
T 2r8w_A 103 RRTLMAGIGALRTDEAVALAKDAEAAGADALLLA--PVSY----------TPLTQEEAYHHFAAVAGA 158 (332)
T ss_dssp SSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEEC--CCCS----------SCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999998876 89999884 2432 113455555566666555
No 276
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=79.34 E-value=2.9 Score=36.80 Aligned_cols=55 Identities=15% Similarity=0.058 Sum_probs=39.2
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..||++.+++++..+..+.++..++ |+|+|.+- .|.- ...+.+.+.+-.+.+.++
T Consensus 100 rvpViaGvg~~st~eai~la~~A~~~Gadavlv~--~P~Y----------~~~s~~~l~~~f~~VA~a 155 (343)
T 2v9d_A 100 RVPVLIGTGGTNARETIELSQHAQQAGADGIVVI--NPYY----------WKVSEANLIRYFEQVADS 155 (343)
T ss_dssp SSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEE--CCSS----------SCCCHHHHHHHHHHHHHT
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999998876 89999984 2332 112455555555665555
No 277
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=79.26 E-value=3.2 Score=35.64 Aligned_cols=55 Identities=16% Similarity=-0.017 Sum_probs=38.6
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.-. ..+.+.+.+-.+++.++
T Consensus 77 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y~----------~~s~~~l~~~f~~va~a 132 (301)
T 3m5v_A 77 KVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV--APYYN----------KPTQQGLYEHYKAIAQS 132 (301)
T ss_dssp SCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--CCCSS----------CCCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc--CCCCC----------CCCHHHHHHHHHHHHHh
Confidence 4799999888899999999998876 89999983 23321 12445555555555555
No 278
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=79.25 E-value=3.5 Score=35.39 Aligned_cols=33 Identities=12% Similarity=-0.136 Sum_probs=28.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 76 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 109 (297)
T 3flu_A 76 RVPVIAGTGANNTVEAIALSQAAEKAGADYTLSV 109 (297)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEC
Confidence 4799999988899999999998876 89999983
No 279
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=79.17 E-value=5.2 Score=35.33 Aligned_cols=73 Identities=11% Similarity=0.108 Sum_probs=52.3
Q ss_pred CHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++++.+.++. ++.|++.+.+..||+ | .+++.-.+.++++++++ +.++++.+...
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~---------g----~~~~~d~~~v~avR~a~---------g~~~~l~vDan~~ 203 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVM---------G----DDPDTDYAIVKAVREAA---------GPEMEVQIDLASK 203 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTT---------T----SCHHHHHHHHHHHHHHH---------CSSSEEEEECTTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCC---------C----CCHHHHHHHHHHHHHHh---------CCCCeEEEECCCC
Confidence 33777766655 467999999999964 1 25677777888888863 13567776654
Q ss_pred hh---cHHHHHHHHhC-CCCeE
Q psy7344 202 VA---KRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 ~~---~~~~~~~~l~~-G~~~i 219 (240)
++ +..++++.|++ |+++|
T Consensus 204 ~~d~~~A~~~~~~l~~~~i~~i 225 (374)
T 3sjn_A 204 WHTCGHSAMMAKRLEEFNLNWI 225 (374)
T ss_dssp TCSHHHHHHHHHHSGGGCCSEE
T ss_pred CCCHHHHHHHHHHhhhcCceEE
Confidence 54 45788999999 99988
No 280
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=78.95 E-value=6.3 Score=41.30 Aligned_cols=93 Identities=13% Similarity=-0.078 Sum_probs=57.8
Q ss_pred CCceeEEeecC-CHHHHHHHHHHHccCCCEEEe-cCCCchhhhhcccccccc--------cCCHHHHHHHHHHhhhcccc
Q psy7344 114 MCGHSLMFCGN-DSKNLTEAAKLAEPHCDGIDI-NIGCPQMVAKRGHYGAYL--------QDDWPLLTNLVYSPNMVHFV 183 (240)
Q Consensus 114 ~~pvivqi~g~-d~~~~~~aa~~le~~~d~Idi-n~gCP~~~~~~~g~G~~l--------~~~p~~i~~iv~~~~~~~~~ 183 (240)
..|+++++.++ +... .+....+.|+|+|.+ |.+ +|+|++- +.-...+.++.+++.+.
T Consensus 1028 ~~PV~VKlv~~~gi~~--~A~~a~kAGAD~IvVsG~e--------GGTgasp~~~~~~~GlPt~~aL~ev~~al~~~--- 1094 (1520)
T 1ofd_A 1028 EAQVSVKLVAEIGIGT--IAAGVAKANADIIQISGHD--------GGTGASPLSSIKHAGSPWELGVTEVHRVLMEN--- 1094 (1520)
T ss_dssp TSEEEEEEECSTTHHH--HHHHHHHTTCSEEEEECTT--------CCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHT---
T ss_pred CCCEEEEecCCCChHH--HHHHHHHcCCCEEEEeCCC--------CccCCCcchhhcCCchhHHHHHHHHHHHHHhc---
Confidence 46899998764 2222 333344558999998 332 1221110 23346667777665442
Q ss_pred ccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 184 IAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 184 i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
+ + ..++||.+-..+.+-.++++++..||+++.+ ||.
T Consensus 1095 ---g-l-r~~IpVIAdGGIrtG~DVakALaLGAdaV~i-GTa 1130 (1520)
T 1ofd_A 1095 ---Q-L-RDRVLLRADGGLKTGWDVVMAALMGAEEYGF-GSI 1130 (1520)
T ss_dssp ---T-C-GGGCEEEEESSCCSHHHHHHHHHTTCSEEEC-SHH
T ss_pred ---C-C-CCCceEEEECCCCCHHHHHHHHHcCCCeeEE-cHH
Confidence 0 0 0257888877788888999999999999988 554
No 281
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=78.85 E-value=3.6 Score=35.63 Aligned_cols=33 Identities=9% Similarity=-0.050 Sum_probs=28.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 92 rvpViaGvg~~st~eai~la~~A~~~Gadavlv~ 125 (314)
T 3qze_A 92 RIPVIAGTGANSTREAVALTEAAKSGGADACLLV 125 (314)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEc
Confidence 4799999888899999999998876 89999983
No 282
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=78.79 E-value=3.9 Score=36.01 Aligned_cols=54 Identities=6% Similarity=-0.156 Sum_probs=38.8
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhccccccccc-CCHHHHHHHHHHhhh
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQ-DDWPLLTNLVYSPNM 179 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~-~~p~~i~~iv~~~~~ 179 (240)
..||++.+++++..+..+.++..++ |+|+|.+- .|.-. . .+.+.+.+-.+.+.+
T Consensus 92 rvpViaGvg~~st~eai~la~~A~~~Gadavlv~--~P~y~----------~~~s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 92 GIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVI--PRVLS----------RGSVIAAQKAHFKAILS 147 (344)
T ss_dssp TCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEC--CCCSS----------STTCHHHHHHHHHHHHH
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC--CCccC----------CCCCHHHHHHHHHHHHh
Confidence 4799999988899999999998876 89999984 34321 1 245566666666655
No 283
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=78.55 E-value=12 Score=31.49 Aligned_cols=94 Identities=10% Similarity=0.001 Sum_probs=54.3
Q ss_pred CCceeEEee-c--CCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFC-G--NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~-g--~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
+.|+++-+- | +++ ...+.++++.|+++|.|-=+-+. -|..+ .+.+...+-+++++++-..
T Consensus 80 ~~pviaD~~~Gyg~~~--~~~~~~l~~aGa~gv~iEd~~~~-------~~k~l-~~~~e~~~~I~a~~~a~~~------- 142 (255)
T 2qiw_A 80 SIPVSVDVESGYGLSP--ADLIAQILEAGAVGINVEDVVHS-------EGKRV-REAQEHADYIAAARQAADV------- 142 (255)
T ss_dssp SSCEEEECTTCTTCCH--HHHHHHHHHTTCCEEEECSEEGG-------GTTEE-CCHHHHHHHHHHHHHHHHH-------
T ss_pred CCCEEeccCCCcCcHH--HHHHHHHHHcCCcEEEECCCCCC-------CCCcc-cCHHHHHHHHHHHHHHHHh-------
Confidence 378888772 2 344 33344444558999998766311 12223 4555555555555553100
Q ss_pred CCCeeeEEeeeh--------------hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 191 GNDINIGCPQMV--------------AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 191 ~~~~pvsvK~r~--------------~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
..+|+.+.-|. +..++-++.+++ |||.|.+++-.
T Consensus 143 -~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~~~ 191 (255)
T 2qiw_A 143 -AGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVYPVGLS 191 (255)
T ss_dssp -HTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred -cCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 03565555552 345667778899 99999999865
No 284
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=78.50 E-value=5.3 Score=34.94 Aligned_cols=76 Identities=9% Similarity=0.033 Sum_probs=51.7
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+.+++++++.+.++.+ +.|++.|.+..|++ +++...++++++++++ +.+
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~---------g~~ 185 (366)
T 1tkk_A 130 LETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD---------------DIATDIARIQEIRKRV---------GSA 185 (366)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHH---------CSS
T ss_pred eeeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHh---------CCC
Confidence 4555566667888887766654 56999999988851 4555567777777762 135
Q ss_pred eeeEEeee----hhcHHHHHHHHhC
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD 214 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~ 214 (240)
+++.++.. .++..++++.|++
T Consensus 186 ~~l~vDan~~~~~~~a~~~~~~l~~ 210 (366)
T 1tkk_A 186 VKLRLDANQGWRPKEAVTAIRKMED 210 (366)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhh
Confidence 66776655 3456788888866
No 285
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=78.48 E-value=5.2 Score=33.93 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=29.2
Q ss_pred cccCCCCeecccCCCchhhhhccCCCcccCCCchhHHHHHHHhhcccCCCceeec
Q psy7344 10 ETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMG 64 (240)
Q Consensus 10 ~~~~~~d~id~N~gcP~~kv~k~~~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk 64 (240)
..+.|++.|.++.++|... +...|+.+++.++.+. ++. +..+.|+.+.
T Consensus 37 ~~~~Ga~~i~~~e~v~~~~--~~~~G~~~~~~~~~i~----~i~-~~~~~Pvi~~ 84 (297)
T 2zbt_A 37 AEEAGAVAVMALERVPADI--RAQGGVARMSDPKIIK----EIM-AAVSIPVMAK 84 (297)
T ss_dssp HHHHTCSEEEECSSCHHHH--HHTTCCCCCCCHHHHH----HHH-TTCSSCEEEE
T ss_pred HHHCCCcEEEeccccchHH--HhhcCCccCCCHHHHH----HHH-HhcCCCeEEE
Confidence 4455788888886666532 2234666777777744 455 2446787653
No 286
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=78.48 E-value=3 Score=35.28 Aligned_cols=47 Identities=19% Similarity=0.061 Sum_probs=31.7
Q ss_pred CChhhHHHhhhcccCCCCceeEEeecC-CHHHHHHHHHHHcc-CC-CEEEecCC
Q psy7344 98 DDWPLLTELGFKTRSHMCGHSLMFCGN-DSKNLTEAAKLAEP-HC-DGIDINIG 148 (240)
Q Consensus 98 ~d~eli~~i~~~~~~~~~pvivqi~g~-d~~~~~~aa~~le~-~~-d~Idin~g 148 (240)
.+.++++++.. ...|++++-+.. +++++..+++.+.. |. +.+-+-+|
T Consensus 118 ~n~~ll~~~a~----~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG 167 (262)
T 1zco_A 118 QNFELLKEVGK----VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERG 167 (262)
T ss_dssp TCHHHHHHHTT----SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred cCHHHHHHHHh----cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 34445554432 358999997665 89999999998865 54 44555566
No 287
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=78.39 E-value=9.3 Score=31.75 Aligned_cols=81 Identities=11% Similarity=-0.018 Sum_probs=49.8
Q ss_pred CCceeEEee--------cCCHHHHHHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccc
Q psy7344 114 MCGHSLMFC--------GNDSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVI 184 (240)
Q Consensus 114 ~~pvivqi~--------g~d~~~~~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i 184 (240)
..|+++.+. +.++++..++++..+ .|+|.|-++. ..+++.++++.+.+
T Consensus 145 g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~----------------~~~~~~l~~i~~~~------- 201 (273)
T 2qjg_A 145 GMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY----------------TGDIDSFRDVVKGC------- 201 (273)
T ss_dssp TCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC----------------CSSHHHHHHHHHHC-------
T ss_pred CCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC----------------CCCHHHHHHHHHhC-------
Confidence 467776541 134566667766664 4889888762 14788888887753
Q ss_pred cCCCCCCCCeeeEEeeeh-----hcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 185 AEPHCDGNDINIGCPQMV-----AKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 185 ~~~~~~~~~~pvsvK~r~-----~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
++||.+=..+ ++..+.++.+.+ |++++.+ +|.-
T Consensus 202 --------~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v-g~~i 240 (273)
T 2qjg_A 202 --------PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV-GRNI 240 (273)
T ss_dssp --------SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC-CHHH
T ss_pred --------CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe-eHHh
Confidence 3354443332 234444555567 9999988 6643
No 288
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=78.36 E-value=17 Score=31.92 Aligned_cols=78 Identities=12% Similarity=-0.001 Sum_probs=44.3
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+..- +-+.++..+.++.+++ +.+.|+= |.. ..|++..+++.+.
T Consensus 190 d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEq----P~~-----------~~~~~~~~~l~~~--------------- 239 (384)
T 2pgw_A 190 DARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQ----PTV-----------SWSIPAMAHVREK--------------- 239 (384)
T ss_dssp TCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC----CSC-----------TTCHHHHHHHHHH---------------
T ss_pred CcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeC----CCC-----------hhhHHHHHHHHhh---------------
Confidence 455555542 2377777888888876 6777772 111 2477777777664
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+++||..-.++.+..++.+.+++ .+|.|.+
T Consensus 240 ~~iPI~~de~i~~~~~~~~~i~~~~~d~v~i 270 (384)
T 2pgw_A 240 VGIPIVADQAAFTLYDVYEICRQRAADMICI 270 (384)
T ss_dssp CSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEE
Confidence 34455554444444445555555 4555544
No 289
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=78.31 E-value=3.9 Score=35.30 Aligned_cols=33 Identities=3% Similarity=-0.178 Sum_probs=28.8
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 77 rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 110 (309)
T 3fkr_A 77 RVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAM 110 (309)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEc
Confidence 4799999988899999999998876 89999983
No 290
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=78.26 E-value=5.6 Score=35.88 Aligned_cols=71 Identities=17% Similarity=0.132 Sum_probs=49.8
Q ss_pred CCH-HHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee
Q psy7344 124 NDS-KNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM 201 (240)
Q Consensus 124 ~d~-~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r 201 (240)
.++ +.+.+.++.+ +.|+++|.+..|+ +++...++++++++++ +.++++.+...
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~av---------G~d~~l~vDan 237 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD----------------AARVDIERVRHVRKVL---------GDEVDILTDAN 237 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS----------------CHHHHHHHHHHHHHHH---------CTTSEEEEECT
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC----------------CHHHHHHHHHHHHHhc---------CCCCEEEEECC
Confidence 567 7777666554 5699999997773 4455567777777762 13556665544
Q ss_pred ----hhcHHHHHHHHhC-CCCeE
Q psy7344 202 ----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 ----~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 238 ~~~~~~eai~~~~~L~~~~i~~i 260 (428)
T 3bjs_A 238 TAYTMADARRVLPVLAEIQAGWL 260 (428)
T ss_dssp TCCCHHHHHHHHHHHHHTTCSCE
T ss_pred CCCCHHHHHHHHHHHHhcCCCEE
Confidence 3567889999999 99987
No 291
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=78.22 E-value=3.6 Score=35.08 Aligned_cols=55 Identities=13% Similarity=-0.092 Sum_probs=39.4
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.- ...+.+.+.+-.+++.++
T Consensus 69 r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~--~P~y----------~~~s~~~l~~~f~~ia~a 124 (289)
T 2yxg_A 69 RVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSI--TPYY----------NKPTQEGLRKHFGKVAES 124 (289)
T ss_dssp SSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE--CCCS----------SCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999998876 89999984 2432 113556666666666665
No 292
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=78.16 E-value=9.4 Score=32.32 Aligned_cols=99 Identities=11% Similarity=0.061 Sum_probs=56.4
Q ss_pred ChhhHHHhhhcccCCCCceeEEee---cC-CHH-HHHHHHHHHccCCCEEEe--cCCCchhhhhcccccccccCCHHHHH
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFC---GN-DSK-NLTEAAKLAEPHCDGIDI--NIGCPQMVAKRGHYGAYLQDDWPLLT 171 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~---g~-d~~-~~~~aa~~le~~~d~Idi--n~gCP~~~~~~~g~G~~l~~~p~~i~ 171 (240)
.|.++......+......+...+. |. ..+ ...++...++.|+|.||+ |.| +..-.+|+.+.
T Consensus 79 ~p~~V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig------------~lk~g~~~~v~ 146 (260)
T 3r12_A 79 NPCYVKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADEIDMVINVG------------MLKAKEWEYVY 146 (260)
T ss_dssp CGGGHHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHH------------HHHTTCHHHHH
T ss_pred CHHHHHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehh------------hhccccHHHHH
Confidence 466666554444322233332222 22 222 344566667789999995 444 22235899888
Q ss_pred HHHHHhhhccccccCCCCCCCCeeeEEeeeh-------hcHHHHHHHHhC-CCCeEEE
Q psy7344 172 NLVYSPNMVHFVIAEPHCDGNDINIGCPQMV-------AKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 172 ~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~-------~~~~~~~~~l~~-G~~~iti 221 (240)
+=+.+++++. ...| +|.-+ +.....++...+ |+|+|--
T Consensus 147 ~eI~~v~~a~----------~~~~--lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKT 192 (260)
T 3r12_A 147 EDIRSVVESV----------KGKV--VKVIIETCYLDTEEKIAACVISKLAGAHFVKT 192 (260)
T ss_dssp HHHHHHHHHT----------TTSE--EEEECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHhc----------CCCc--EEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEc
Confidence 8888887761 1223 35542 234556677778 9999854
No 293
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=78.04 E-value=4.4 Score=37.54 Aligned_cols=70 Identities=11% Similarity=0.059 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhc
Q psy7344 125 DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAK 204 (240)
Q Consensus 125 d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~ 204 (240)
..+....+..+++.++|.|.++..+| ++..+.++++++++.. .++|+.++.- .
T Consensus 254 ~~d~~era~aLveaGvd~I~Id~a~g---------------~~~~v~~~i~~i~~~~----------~~~~vi~g~v--~ 306 (511)
T 3usb_A 254 TADAMTRIDALVKASVDAIVLDTAHG---------------HSQGVIDKVKEVRAKY----------PSLNIIAGNV--A 306 (511)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHC----------TTSEEEEEEE--C
T ss_pred ccchHHHHHHHHhhccceEEeccccc---------------chhhhhhHHHHHHHhC----------CCceEEeeee--c
Confidence 33444555556677999999997754 2334556666666651 2467777543 2
Q ss_pred HHHHHHHHhC-CCCeEEE
Q psy7344 205 RGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 205 ~~~~~~~l~~-G~~~iti 221 (240)
+.+.++.+.+ |+|+|.+
T Consensus 307 t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 307 TAEATKALIEAGANVVKV 324 (511)
T ss_dssp SHHHHHHHHHHTCSEEEE
T ss_pred cHHHHHHHHHhCCCEEEE
Confidence 4567888999 9999998
No 294
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=77.91 E-value=2.2 Score=35.49 Aligned_cols=62 Identities=6% Similarity=-0.203 Sum_probs=30.5
Q ss_pred CChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHh
Q psy7344 98 DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSP 177 (240)
Q Consensus 98 ~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~ 177 (240)
.++++++++...+ ..|+++. +.+.+..++.++++.|+|+|.++.+ ++..+..+.++.+.+
T Consensus 187 ~~~~~i~~l~~~~---~ipvia~---GGI~~~ed~~~~~~~Gadgv~vgsa--------------l~~~~~~~~~~~~~l 246 (266)
T 2w6r_A 187 YDTEMIRFVRPLT---TLPIIAS---GGAGKMEHFLEAFLAGADAALAASV--------------FHFREIDMRELKEYL 246 (266)
T ss_dssp CCHHHHHHHGGGC---CSCEEEE---SCCCSHHHHHHHHHHTCSEEEESTT--------------TC-------------
T ss_pred CCHHHHHHHHHHc---CCCEEEe---CCCCCHHHHHHHHHcCCHHHHccHH--------------HHcCCCCHHHHHHHH
Confidence 3578888876543 4788776 4444444555555568999999666 455665666666665
Q ss_pred hh
Q psy7344 178 NM 179 (240)
Q Consensus 178 ~~ 179 (240)
.+
T Consensus 247 ~~ 248 (266)
T 2w6r_A 247 KK 248 (266)
T ss_dssp --
T ss_pred HH
Confidence 54
No 295
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=77.85 E-value=4.8 Score=34.36 Aligned_cols=33 Identities=15% Similarity=-0.009 Sum_probs=28.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 70 r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 103 (291)
T 3tak_A 70 RIPIIAGTGANSTREAIELTKAAKDLGADAALLV 103 (291)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 4799999888899999999998876 89999983
No 296
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=77.53 E-value=3.3 Score=35.43 Aligned_cols=33 Identities=15% Similarity=0.011 Sum_probs=28.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 73 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 73 QIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp SSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 4799999988899999999998876 89999984
No 297
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=77.53 E-value=5.9 Score=33.70 Aligned_cols=70 Identities=10% Similarity=-0.056 Sum_probs=45.9
Q ss_pred HHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC-eeeEEeeehhcHHHH
Q psy7344 131 EAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND-INIGCPQMVAKRGHY 208 (240)
Q Consensus 131 ~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~-~pvsvK~r~~~~~~~ 208 (240)
..++.+++ +++.|| -.|.|.. +|.. +.+|+.++.+++. . .+ +||.+--.+.+..+.
T Consensus 136 ~~ak~l~~~G~~aVm-Plg~pIG------sG~G-i~~~~~L~~i~~~---~-----------~~~vPVI~~GGI~tpsDA 193 (268)
T 2htm_A 136 VLAKRLAALGTATVM-PLAAPIG------SGWG-VRTRALLELFARE---K-----------ASLPPVVVDAGLGLPSHA 193 (268)
T ss_dssp HHHHHHHHHTCSCBE-EBSSSTT------TCCC-STTHHHHHHHHHT---T-----------TTSSCBEEESCCCSHHHH
T ss_pred HHHHHHHhcCCCEEE-ecCccCc------CCcc-cCCHHHHHHHHHh---c-----------CCCCeEEEeCCCCCHHHH
Confidence 34455544 677773 3454433 3332 3579988777662 1 34 688886668888888
Q ss_pred HHHHhCCCCeEEEe
Q psy7344 209 GAYLQDDWPLLTEL 222 (240)
Q Consensus 209 ~~~l~~G~~~itih 222 (240)
+.+++.|+|++.+-
T Consensus 194 a~AmeLGAdgVlVg 207 (268)
T 2htm_A 194 AEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHTTCCEEEES
T ss_pred HHHHHcCCCEEEEC
Confidence 88888899999873
No 298
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=77.50 E-value=9.5 Score=32.03 Aligned_cols=89 Identities=10% Similarity=-0.112 Sum_probs=51.3
Q ss_pred CCceeEEeec--------CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccc
Q psy7344 114 MCGHSLMFCG--------NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVI 184 (240)
Q Consensus 114 ~~pvivqi~g--------~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i 184 (240)
..|+++...- .+++....+++...+ |+|.|-++. | .+++.++++++.+ ..+||+
T Consensus 138 ~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~--~--------------~~~e~~~~~~~~~-~~~pV~ 200 (263)
T 1w8s_A 138 DLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKY--T--------------GDPKTFSWAVKVA-GKVPVL 200 (263)
T ss_dssp TCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEEC--C--------------SSHHHHHHHHHHT-TTSCEE
T ss_pred CCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcC--C--------------CCHHHHHHHHHhC-CCCeEE
Confidence 4677766321 155666667777654 899987763 1 2678888888764 211232
Q ss_pred cCCCCCCCCeeeEEee-ehhcHHHHHHHHhC-CCCeEEEeccccccc
Q psy7344 185 AEPHCDGNDINIGCPQ-MVAKRGHYGAYLQD-DWPLLTELGKMAMLV 229 (240)
Q Consensus 185 ~~~~~~~~~~pvsvK~-r~~~~~~~~~~l~~-G~~~itih~R~~~~~ 229 (240)
+.|.+ +. ..+++.+.++.+.+ |++++.+ +|.-.|.
T Consensus 201 asGGi---------~~~~~~~~l~~i~~~~~aGA~Gvsv-graI~~~ 237 (263)
T 1w8s_A 201 MSGGP---------KTKTEEDFLKQVEGVLEAGALGIAV-GRNVWQR 237 (263)
T ss_dssp EECCS---------CCSSHHHHHHHHHHHHHTTCCEEEE-SHHHHTS
T ss_pred EEeCC---------CCCCHHHHHHHHHHHHHcCCeEEEE-ehhhcCC
Confidence 22211 11 12344445555557 9999887 8876553
No 299
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=77.47 E-value=4.2 Score=35.25 Aligned_cols=33 Identities=21% Similarity=0.068 Sum_probs=28.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|+|.+-
T Consensus 91 rvpViaGvg~~st~~ai~la~~A~~~Gadavlv~ 124 (315)
T 3si9_A 91 RVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVV 124 (315)
T ss_dssp SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 4799999988999999999998876 89999983
No 300
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=77.41 E-value=7.7 Score=40.55 Aligned_cols=93 Identities=12% Similarity=-0.068 Sum_probs=57.2
Q ss_pred CCceeEEeecC-CHHHHHHHHHHHccCCCEEEe-cCCCchhhhhcccccccc--------cCCHHHHHHHHHHhhhcccc
Q psy7344 114 MCGHSLMFCGN-DSKNLTEAAKLAEPHCDGIDI-NIGCPQMVAKRGHYGAYL--------QDDWPLLTNLVYSPNMVHFV 183 (240)
Q Consensus 114 ~~pvivqi~g~-d~~~~~~aa~~le~~~d~Idi-n~gCP~~~~~~~g~G~~l--------~~~p~~i~~iv~~~~~~~~~ 183 (240)
..|+++++.++ +..+ .+....+.|+|+|.+ |.+ +|+|+.- +.-...+.++.+++...
T Consensus 993 ~~PV~VKlv~~~gi~~--~A~~a~~AGAD~IvVsG~e--------GGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~--- 1059 (1479)
T 1ea0_A 993 DAKVTVKLVSRSGIGT--IAAGVAKANADIILISGNS--------GGTGASPQTSIKFAGLPWEMGLSEVHQVLTLN--- 1059 (1479)
T ss_dssp TCEEEEEEECCTTHHH--HHHHHHHTTCSEEEEECTT--------CCCSSEETTHHHHSCCCHHHHHHHHHHHHHTT---
T ss_pred CCCEEEEEcCCCChHH--HHHHHHHcCCcEEEEcCCC--------CCCCCCchhhhcCCchhHHHHHHHHHHHHHHc---
Confidence 46899998764 2222 233334558999998 332 2222211 12234566666665432
Q ss_pred ccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 184 IAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 184 i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
+ + ..++||.+-..+.+-.++++++..||+++.+ ||.
T Consensus 1060 ---g-l-r~~VpVIAdGGIrtG~DVakALaLGAdaV~i-GTa 1095 (1479)
T 1ea0_A 1060 ---R-L-RHRVRLRTDGGLKTGRDIVIAAMLGAEEFGI-GTA 1095 (1479)
T ss_dssp ---T-C-TTTSEEEEESSCCSHHHHHHHHHTTCSEEEC-CHH
T ss_pred ---C-C-CCCceEEEECCCCCHHHHHHHHHcCCCeeeE-cHH
Confidence 0 0 0257888877788888999999999999988 554
No 301
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=77.38 E-value=8.7 Score=34.10 Aligned_cols=81 Identities=9% Similarity=0.048 Sum_probs=53.8
Q ss_pred CceeEEee----cCCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCC
Q psy7344 115 CGHSLMFC----GNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHC 189 (240)
Q Consensus 115 ~pvivqi~----g~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~ 189 (240)
.|+...+. ..+++++.+.++. ++.|+..+.+..|+ +++.-.+.++++++++
T Consensus 128 v~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~-------- 183 (391)
T 3gd6_A 128 IKVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK----------------NLDADEEFLSRVKEEF-------- 183 (391)
T ss_dssp EEBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHH--------
T ss_pred EEeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHc--------
Confidence 46656665 5678887776665 46789999998884 3444445666666652
Q ss_pred CCCCeeeE-Eeee----hhcHHHHHHHHhC-CC--CeEE
Q psy7344 190 DGNDINIG-CPQM----VAKRGHYGAYLQD-DW--PLLT 220 (240)
Q Consensus 190 ~~~~~pvs-vK~r----~~~~~~~~~~l~~-G~--~~it 220 (240)
+.++++. +... .++..++++.|++ |+ .+|-
T Consensus 184 -g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iE 221 (391)
T 3gd6_A 184 -GSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIE 221 (391)
T ss_dssp -GGGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEE
T ss_pred -CCCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceec
Confidence 1244555 4443 3567889999999 99 7773
No 302
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=77.31 E-value=4.2 Score=34.82 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=45.4
Q ss_pred CHHHHHHHHH-HHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++...+.++ ++++|+|.||||.- . .+. |+.-....+.+.+++..++... . .++|+|+-..
T Consensus 27 ~~~~a~~~a~~~v~~GAdiIDIGge-s----trp--ga~~v~~~eE~~Rv~pvi~~l~--------~-~~~piSIDT~~~ 90 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIVDVGGE-S----SRP--GATRVDPAVETSRVIPVVKELA--------A-QGITVSIDTMRA 90 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC---------------------HHHHHHHHHHHH--------H-TTCCEEEECSCH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCc-c----CCC--CCCCCCHHHHHHHHHHHHHHhh--------c-CCCEEEEeCCCH
Confidence 5666666444 55779999999852 1 111 2222334445555554444420 0 1568888766
Q ss_pred -------------hhc------HHHHHHHHhC-CCCeEEEecc
Q psy7344 202 -------------VAK------RGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 202 -------------~~~------~~~~~~~l~~-G~~~itih~R 224 (240)
+.+ ..++++.+.+ |+..+.+|.|
T Consensus 91 ~va~aAl~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~ 133 (280)
T 1eye_A 91 DVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWR 133 (280)
T ss_dssp HHHHHHHHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCC
Confidence 011 2357777788 9999999976
No 303
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=77.02 E-value=8.3 Score=32.22 Aligned_cols=103 Identities=9% Similarity=-0.028 Sum_probs=55.7
Q ss_pred ChhhHHHhhhcccCCCCceeEEee---cC-CHH-HHHHHHHHHccCCCEEEe--cCCCchhhhhcccccccccCCHHHHH
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFC---GN-DSK-NLTEAAKLAEPHCDGIDI--NIGCPQMVAKRGHYGAYLQDDWPLLT 171 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~---g~-d~~-~~~~aa~~le~~~d~Idi--n~gCP~~~~~~~g~G~~l~~~p~~i~ 171 (240)
+|.++......+......+...+. |. ..+ ...++.+.++.|+|.||+ |.| +..-.||+.+.
T Consensus 63 ~p~~v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig------------~lk~g~~~~v~ 130 (239)
T 3ngj_A 63 NPTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIG------------MVKAKKYDDVE 130 (239)
T ss_dssp CGGGHHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHH------------HHHTTCHHHHH
T ss_pred CHHHHHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehH------------HhccccHHHHH
Confidence 466666554444322233332332 22 333 344566677889999995 444 11235888887
Q ss_pred HHHHHhhhccccccCCCCCCCCeeeEEeee-h--hcHHHHHHHHhC-CCCeEEE
Q psy7344 172 NLVYSPNMVHFVIAEPHCDGNDINIGCPQM-V--AKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 172 ~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-~--~~~~~~~~~l~~-G~~~iti 221 (240)
+=++++++.. .+..++|.+-.- + +.....++...+ |+|+|--
T Consensus 131 ~eI~~v~~a~--------~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKT 176 (239)
T 3ngj_A 131 KDVKAVVDAS--------GKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKT 176 (239)
T ss_dssp HHHHHHHHHH--------TTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHh--------cCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEEC
Confidence 7777777762 111122222111 1 234566677788 9999854
No 304
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=76.95 E-value=7 Score=34.16 Aligned_cols=80 Identities=14% Similarity=0.046 Sum_probs=53.2
Q ss_pred ceeEEeecCCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 116 GHSLMFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
|+...+...+++++.+.++. ++.|+..+-+..|+. ++.-.+.++++++++ +.++
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~---------g~~~ 184 (354)
T 3jva_A 130 ITDITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG----------------IEADIARVKAIREAV---------GFDI 184 (354)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHH---------CTTS
T ss_pred eeeEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHc---------CCCC
Confidence 44445555788887776554 467899999988852 233345666677652 1355
Q ss_pred eeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 195 NIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 195 pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
++.+... .++..++++.|++ |+++|-
T Consensus 185 ~l~vDan~~~~~~~a~~~~~~L~~~~i~~iE 215 (354)
T 3jva_A 185 KLRLDANQAWTPKDAVKAIQALADYQIELVE 215 (354)
T ss_dssp EEEEECTTCSCHHHHHHHHHHTTTSCEEEEE
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 6666554 3567889999999 988873
No 305
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=76.95 E-value=3.7 Score=35.32 Aligned_cols=55 Identities=15% Similarity=0.024 Sum_probs=38.8
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.- ...+.+.+.+-.+.+.++
T Consensus 85 rvpviaGvg~~st~~ai~la~~A~~~Gadavlv~--~P~y----------~~~~~~~l~~~f~~ia~a 140 (304)
T 3cpr_A 85 RAKLIAGVGTNNTRTSVELAEAAASAGADGLLVV--TPYY----------SKPSQEGLLAHFGAIAAA 140 (304)
T ss_dssp TSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEE--CCCS----------SCCCHHHHHHHHHHHHHH
T ss_pred CCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999998876 89999984 2321 112455555555555555
No 306
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=76.76 E-value=3.8 Score=35.03 Aligned_cols=33 Identities=18% Similarity=0.032 Sum_probs=28.8
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 71 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 104 (292)
T 3daq_A 71 RVPVIAGTGTNDTEKSIQASIQAKALGADAIMLI 104 (292)
T ss_dssp SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEEC
Confidence 4799999888899999999999876 89999983
No 307
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=76.43 E-value=13 Score=32.90 Aligned_cols=78 Identities=8% Similarity=-0.037 Sum_probs=48.8
Q ss_pred CCceeEEeecC----CHHHHHHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCC
Q psy7344 114 MCGHSLMFCGN----DSKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPH 188 (240)
Q Consensus 114 ~~pvivqi~g~----d~~~~~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~ 188 (240)
+.|+.||=+.+ |.+.+.+-++.++ .|||.|.+ ++|.. +. ++.+..+++.
T Consensus 29 ~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRv--avp~~---------------~~-a~al~~I~~~-------- 82 (366)
T 3noy_A 29 DAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRV--AVPHK---------------ED-VEALEEIVKK-------- 82 (366)
T ss_dssp TSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEE--ECCSH---------------HH-HHHHHHHHHH--------
T ss_pred CCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEe--CCCCh---------------HH-HHHHHHHHhc--------
Confidence 46888886654 6676666666664 48999998 33432 22 3455555555
Q ss_pred CCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEe
Q psy7344 189 CDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 189 ~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih 222 (240)
+++|+++-+-++. .++....+ |+|.+.|-
T Consensus 83 ---~~vPlvaDiHf~~--~lal~a~e~G~dklRIN 112 (366)
T 3noy_A 83 ---SPMPVIADIHFAP--SYAFLSMEKGVHGIRIN 112 (366)
T ss_dssp ---CSSCEEEECCSCH--HHHHHHHHTTCSEEEEC
T ss_pred ---CCCCEEEeCCCCH--HHHHHHHHhCCCeEEEC
Confidence 6789998776543 23333344 88887763
No 308
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=76.34 E-value=7.5 Score=34.54 Aligned_cols=84 Identities=14% Similarity=0.134 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecC------CCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeE
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINI------GCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIG 197 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~------gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvs 197 (240)
+++++.+.++.+ +.|+++|.+.. |+.... ...|.....+.+...++++++++++ +.++++.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~~~~~~~~~~~~~e~v~avR~a~---------G~d~~l~ 219 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQ---NLNGPLTDKILRLGYDRMAAIRDAV---------GPDVDII 219 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCS---CCCSSCCHHHHHHHHHHHHHHHHHH---------CTTSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccC---cccCCCchhHHHHHHHHHHHHHHhc---------CCCCEEE
Confidence 788887766654 66999999975 442110 0111110123455667788888762 1356777
Q ss_pred Eeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 198 CPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 198 vK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+... .++..++++.|++ |+++|-
T Consensus 220 vDan~~~~~~~a~~~~~~l~~~~i~~iE 247 (407)
T 2o56_A 220 AEMHAFTDTTSAIQFGRMIEELGIFYYE 247 (407)
T ss_dssp EECTTCSCHHHHHHHHHHHGGGCCSCEE
T ss_pred EECCCCCCHHHHHHHHHHHHhcCCCEEe
Confidence 6654 3567899999999 999873
No 309
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=76.33 E-value=3.5 Score=35.48 Aligned_cols=55 Identities=7% Similarity=-0.129 Sum_probs=38.8
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.- ...+.+.+.+-.+.+.++
T Consensus 80 rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y----------~~~s~~~l~~~f~~va~a 135 (303)
T 2wkj_A 80 KIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAV--TPFY----------YPFSFEEHCDHYRAIIDS 135 (303)
T ss_dssp TSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEE--CCCS----------SCCCHHHHHHHHHHHHHH
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEec--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999888899999999998876 89999984 2332 112455555555555554
No 310
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=76.24 E-value=4.4 Score=34.69 Aligned_cols=82 Identities=11% Similarity=0.009 Sum_probs=51.2
Q ss_pred CHHHHHHHHH-HHccCCCEEEecCCCchhhhhccccccccc---CCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEee
Q psy7344 125 DSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQ---DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQ 200 (240)
Q Consensus 125 d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~l~---~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~ 200 (240)
+++...+.++ ++++|+|.||||.-- .+. |+.-. .+++.+..+++.+++. .++|+|+-.
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGges-----trP--ga~~v~~~eE~~rv~pvi~~l~~~-----------~~~piSIDT 97 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGES-----TRP--GAAEVSVEEELQRVIPVVEAIAQR-----------FEVWISVDT 97 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSC-----CST--TCCCCCHHHHHHHHHHHHHHHHHH-----------CCCEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCc-----CCC--CCCcCCHHHHHHHHHHHHHHHHhh-----------cCCeEEEeC
Confidence 4566655444 557799999998731 111 22222 2344455556666554 578999877
Q ss_pred eh---------------hc-----HHHHHHHHhC-CCCeEEEecc
Q psy7344 201 MV---------------AK-----RGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 201 r~---------------~~-----~~~~~~~l~~-G~~~itih~R 224 (240)
.- .+ ..++++.+.+ |+..+.+|.|
T Consensus 98 ~~~~va~aAl~aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~ 142 (282)
T 1aj0_A 98 SKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQ 142 (282)
T ss_dssp CCHHHHHHHHHTTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCS
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhCCeEEEEccC
Confidence 61 11 2357777788 9999999976
No 311
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=75.99 E-value=3 Score=35.52 Aligned_cols=57 Identities=9% Similarity=-0.178 Sum_probs=38.4
Q ss_pred hcccceeeeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 89 RGHYGAYLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 89 ~g~~ga~l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
.|.+|.+..-..+--.++...+.+ ..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 38 ~GttGE~~~Ls~~Er~~v~~~~~~-rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 95 (283)
T 2pcq_A 38 YGSNGEGVHLTPEERARGLRALRP-RKPFLVGLMEETLPQAEGALLEAKAAGAMALLAT 95 (283)
T ss_dssp TCTTTTGGGSCHHHHHHHHHTCCC-SSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCcCcCchhcCHHHHHHHHHHHHh-CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEec
Confidence 345666442223323333333333 5799999988899999999998876 99999984
No 312
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=75.98 E-value=34 Score=28.69 Aligned_cols=37 Identities=16% Similarity=0.114 Sum_probs=26.0
Q ss_pred hcHHHHHHHHhC-CCCeEEEeccccccc-CCCCCCCCCC
Q psy7344 203 AKRGHYGAYLQD-DWPLLTELGKMAMLV-GILDNTGSWT 239 (240)
Q Consensus 203 ~~~~~~~~~l~~-G~~~itih~R~~~~~-~~~~~~adw~ 239 (240)
...++.++.-.+ ||+.|.+-+|-..+. +.|+...+|.
T Consensus 148 ~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r 186 (251)
T 1qwg_A 148 DDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVK 186 (251)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBC
T ss_pred HHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCc
Confidence 345666666667 999999999976554 5566666663
No 313
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=75.97 E-value=14 Score=32.45 Aligned_cols=80 Identities=10% Similarity=0.050 Sum_probs=53.3
Q ss_pred ceeEEeecCCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 116 GHSLMFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
|....+...+++++.+.++. ++.|+..+-+..|+ +++.-.+.++++++++ +.++
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~---------g~~~ 185 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGG----------------SKELDVERIRMIREAA---------GDSI 185 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHH---------CSSS
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecC----------------CHHHHHHHHHHHHHHh---------CCCC
Confidence 44445555788887776554 46788888887773 3444456677777762 1345
Q ss_pred eeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 195 NIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 195 pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
++.+... .++..++++.|++ |+++|-
T Consensus 186 ~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE 216 (368)
T 3q45_A 186 TLRIDANQGWSVETAIETLTLLEPYNIQHCE 216 (368)
T ss_dssp EEEEECTTCBCHHHHHHHHHHHGGGCCSCEE
T ss_pred eEEEECCCCCChHHHHHHHHHHhhcCCCEEE
Confidence 6655544 3567889999999 998883
No 314
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=75.88 E-value=1.9 Score=36.84 Aligned_cols=24 Identities=8% Similarity=-0.156 Sum_probs=21.3
Q ss_pred hcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 203 AKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 203 ~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
.+.++.+...+. |||+||+|.|--
T Consensus 53 PDpv~aA~~ae~aGAdGITvHlReD 77 (278)
T 3gk0_A 53 PDPVRAALAAEDAGADAITLHLRED 77 (278)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCTT
T ss_pred CCHHHHHHHHHHcCCCEEEeccCCC
Confidence 578899999999 999999999963
No 315
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=75.86 E-value=1.8 Score=36.27 Aligned_cols=25 Identities=4% Similarity=-0.233 Sum_probs=22.0
Q ss_pred hhcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 202 VAKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 202 ~~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
+.+.++.+...++ |||+||+|.|--
T Consensus 24 ~Pdpv~aA~~ae~aGAdgITvHlReD 49 (243)
T 1m5w_A 24 YPDPVQAAFIAEQAGADGITVHLRED 49 (243)
T ss_dssp CSCHHHHHHHHHTTTCSEEEEECCTT
T ss_pred CCCHHHHHHHHHHcCCCEEEeCCCCC
Confidence 3688899999999 999999999963
No 316
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=75.84 E-value=13 Score=30.49 Aligned_cols=73 Identities=14% Similarity=0.044 Sum_probs=43.2
Q ss_pred HHHHHHHHccCCCEEEe--cCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee---hh
Q psy7344 129 LTEAAKLAEPHCDGIDI--NIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM---VA 203 (240)
Q Consensus 129 ~~~aa~~le~~~d~Idi--n~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r---~~ 203 (240)
..++.+.++.|+|.||+ |.| +....+|+.+.+-+..+++.. .+..+||.+-.- .+
T Consensus 74 ~~e~~~Ai~~GAdevd~vinig------------~~~~g~~~~v~~ei~~v~~a~--------~~~~lkvIlet~~l~~e 133 (220)
T 1ub3_A 74 ALEAALACARGADEVDMVLHLG------------RAKAGDLDYLEAEVRAVREAV--------PQAVLKVILETGYFSPE 133 (220)
T ss_dssp HHHHHHHHHTTCSEEEEECCHH------------HHHTTCHHHHHHHHHHHHHHS--------TTSEEEEECCGGGSCHH
T ss_pred HHHHHHHHHcCCCEEEecccch------------hhhCCCHHHHHHHHHHHHHHH--------cCCCceEEEecCCCCHH
Confidence 44555667789999995 444 212358887777777777751 111223322222 13
Q ss_pred cHHHHHHHHhC-CCCeEEE
Q psy7344 204 KRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 204 ~~~~~~~~l~~-G~~~iti 221 (240)
.....++...+ |+|+|--
T Consensus 134 ~i~~a~~ia~eaGADfVKT 152 (220)
T 1ub3_A 134 EIARLAEAAIRGGADFLKT 152 (220)
T ss_dssp HHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHHhCCCEEEe
Confidence 34567777788 9999854
No 317
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=75.66 E-value=8 Score=34.38 Aligned_cols=71 Identities=8% Similarity=0.111 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++++.+.++.. +.|+++|.+..|. .+++...++++++++++ +.++++.+...
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~av---------G~d~~l~vDan~~ 230 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREAL---------GDEFPLMVDANQQ 230 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHH---------CSSSCEEEECTTC
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHc---------CCCCeEEEECCCC
Confidence 788887766654 6689999997662 24556667777777763 13556666554
Q ss_pred --hhcHHHHHHHHhC-CCCeE
Q psy7344 202 --VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 --~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 231 ~~~~~ai~~~~~l~~~~i~~i 251 (398)
T 2pp0_A 231 WDRETAIRMGRKMEQFNLIWI 251 (398)
T ss_dssp SCHHHHHHHHHHHGGGTCSCE
T ss_pred CCHHHHHHHHHHHHHcCCcee
Confidence 3567899999999 99987
No 318
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=75.16 E-value=16 Score=30.05 Aligned_cols=95 Identities=11% Similarity=-0.068 Sum_probs=54.2
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEec-CCCchhhhhcccccccccCCHHHHHHHHHHh
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDIN-IGCPQMVAKRGHYGAYLQDDWPLLTNLVYSP 177 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin-~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~ 177 (240)
+|+.+.++....+....++.+.+ .+. .++.+..+.|+|.|-+| .|.... .+ ....+++.++++.+.
T Consensus 114 ~p~~l~~~i~~~~~~g~~v~~~v--~t~---eea~~a~~~Gad~Ig~~~~g~t~~----~~---~~~~~~~~i~~l~~~- 180 (232)
T 3igs_A 114 RPVAVEALLARIHHHHLLTMADC--SSV---DDGLACQRLGADIIGTTMSGYTTP----DT---PEEPDLPLVKALHDA- 180 (232)
T ss_dssp CSSCHHHHHHHHHHTTCEEEEEC--CSH---HHHHHHHHTTCSEEECTTTTSSSS----SC---CSSCCHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHHCCCEEEEeC--CCH---HHHHHHHhCCCCEEEEcCccCCCC----CC---CCCCCHHHHHHHHhc-
Confidence 35555555544433334455443 333 34444555689999654 342111 11 124688988887763
Q ss_pred hhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEE
Q psy7344 178 NMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTE 221 (240)
Q Consensus 178 ~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~iti 221 (240)
.+ ||.+-..+.+..++.+.++.|++++.+
T Consensus 181 --~i-------------pvIA~GGI~t~~d~~~~~~~GadgV~V 209 (232)
T 3igs_A 181 --GC-------------RVIAEGRYNSPALAAEAIRYGAWAVTV 209 (232)
T ss_dssp --TC-------------CEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred --CC-------------cEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 33 555555566666776666669999988
No 319
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=75.16 E-value=5.7 Score=33.92 Aligned_cols=33 Identities=6% Similarity=-0.113 Sum_probs=28.6
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 72 r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 72 PSRIVTGVLVDSIEDAADQSAEALNAGARNILLA 105 (294)
T ss_dssp GGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEc
Confidence 4699999988899999999998876 89999984
No 320
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=74.96 E-value=2.1 Score=34.76 Aligned_cols=31 Identities=10% Similarity=-0.181 Sum_probs=23.1
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEEec
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~ 223 (240)
+++|+.+...+.+..++ +.+.+ |+|+|.+|.
T Consensus 76 ~~ipvi~~g~i~~~~~~-~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 76 VSIPVLVGGGVRSLEDA-TTLFRAGADKVSVNT 107 (253)
T ss_dssp CSSCEEEESSCCSHHHH-HHHHHHTCSEEEESH
T ss_pred cCCCEEEECCCCCHHHH-HHHHHcCCCEEEECh
Confidence 57799988887666655 55566 999999863
No 321
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=74.93 E-value=21 Score=30.82 Aligned_cols=85 Identities=7% Similarity=-0.017 Sum_probs=51.6
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
.++++-+--.+.++..++++.+...++.+.+|. |.-. . .| |+.++++.+.. . ..+
T Consensus 25 ~~LiVALD~~~~~eal~l~~~l~~~v~~vKVG~--~lf~--~--~G------~~~V~~Lk~~~--g-----------~~I 79 (303)
T 3ru6_A 25 MKLCVALDLSTKEECLQLAKELKNLDIWLKVGL--RAYL--R--DG------FKFIEELKKVD--D-----------FKI 79 (303)
T ss_dssp CEEEEECCCSSHHHHHHHHHHTTTSSCEEEECH--HHHH--H--HT------HHHHHHHHHHC--C-----------CEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHhCCCccEEEeCH--HHHH--H--hC------HHHHHHHHHhh--C-----------CCE
Confidence 457766544566666666776666678888852 3321 1 11 33444443320 1 344
Q ss_pred eeEEeee-hhcHH-HHHHHHhC-CCCeEEEecc
Q psy7344 195 NIGCPQM-VAKRG-HYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 195 pvsvK~r-~~~~~-~~~~~l~~-G~~~itih~R 224 (240)
.+-.|+- +.+|. .+++.+.+ |+|.+|+|+=
T Consensus 80 flDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~ 112 (303)
T 3ru6_A 80 FLDLKFHDIPNTMADACEEVSKLGVDMINIHAS 112 (303)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG
T ss_pred EEEeeeccCchhHHHHHHHHHhcCCCEEEEecc
Confidence 5667766 55554 46778889 9999999984
No 322
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=74.80 E-value=6.6 Score=33.94 Aligned_cols=54 Identities=11% Similarity=-0.185 Sum_probs=37.6
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++ +..+..+.++..++ |+|+|.+- .|.- .....+.+.+-.+++.++
T Consensus 81 rvpViaGvg~-st~~ai~la~~A~~~Gadavlv~--~P~y----------~~~s~~~l~~~f~~va~a 135 (314)
T 3d0c_A 81 RATVVAGIGY-SVDTAIELGKSAIDSGADCVMIH--QPVH----------PYITDAGAVEYYRNIIEA 135 (314)
T ss_dssp SSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEEC--CCCC----------SCCCHHHHHHHHHHHHHH
T ss_pred CCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEEC--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988 88888888888866 89999984 2432 112455555555555555
No 323
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=74.74 E-value=3.6 Score=34.03 Aligned_cols=82 Identities=15% Similarity=0.052 Sum_probs=51.9
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCE--EEecCCC--chhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDG--IDINIGC--PQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~--Idin~gC--P~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+..+|..-|...+.+..+.+++ |+|. +|+=-|. |+. .--+ .+++++++.
T Consensus 8 i~pSila~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~-----------t~G~----~~v~~lr~~----------- 61 (227)
T 1tqx_A 8 IAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNL-----------SFGP----PVINNLKKY----------- 61 (227)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB-----------CCCH----HHHHHHGGG-----------
T ss_pred EEeehhcCChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcch-----------hcCH----HHHHHHHHh-----------
Confidence 5567778899899999888866 6775 6653332 322 1123 355666665
Q ss_pred C-CeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 192 N-DINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 192 ~-~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
+ +.|+.+-+.+.+...+.+.+.+ +|.+|+|+=.
T Consensus 62 ~p~~~~dvhLmv~dp~~~i~~~~~-Ad~itvH~ea 95 (227)
T 1tqx_A 62 TKSIFFDVHLMVEYPEKYVPLLKT-SNQLTFHFEA 95 (227)
T ss_dssp CSSCEEEEEEESSCGGGGGGGCTT-SSEEEEEGGG
T ss_pred CCCCcEEEEEEEcCHHHHHHHHHh-CCEEEEeecC
Confidence 4 6788887776665555444444 7777777644
No 324
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=74.67 E-value=6.4 Score=33.63 Aligned_cols=95 Identities=13% Similarity=0.064 Sum_probs=41.3
Q ss_pred HHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee-eEEeeehhcHH
Q psy7344 129 LTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN-IGCPQMVAKRG 206 (240)
Q Consensus 129 ~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p-vsvK~r~~~~~ 206 (240)
+.+..+.+.+ |++.|+|+-|.-. + ..+.-.++++.+++...|+.. +. .+.| ..-.......+
T Consensus 112 ~~~yl~~~k~lGF~~IEISdGti~------------l-~~~~~~~lI~~a~~~f~Vl~E--vG-~K~~~~~~~~~~~~~I 175 (276)
T 1u83_A 112 VNEFHRYCTYFGCEYIEISNGTLP------------M-TNKEKAAYIADFSDEFLVLSE--VG-SKDAELASRQSSEEWL 175 (276)
T ss_dssp HHHHHHHHHHTTCSEEEECCSSSC------------C-CHHHHHHHHHHHTTTSEEEEE--CS-CCC------CCSTHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCccc------------C-CHHHHHHHHHHHHhhcEEeee--cc-ccCccccCCCCHHHHH
Confidence 3444455444 8999999999411 2 333334555544443323311 00 1111 12222245567
Q ss_pred HHHHHHhC-CCCeEEEecccccccCCCCCCCCCC
Q psy7344 207 HYGAYLQD-DWPLLTELGKMAMLVGILDNTGSWT 239 (240)
Q Consensus 207 ~~~~~l~~-G~~~itih~R~~~~~~~~~~~adw~ 239 (240)
+.++.-.+ ||+.|.+-+|-..+-+.|+...+|.
T Consensus 176 ~~~~~dLeAGA~~ViiEaRESG~~Gi~~~~g~~r 209 (276)
T 1u83_A 176 EYIVEDMEAGAEKVITEARESGTGGICSSSGDVR 209 (276)
T ss_dssp HHHHHHHHHTEEEEEEC-----------------
T ss_pred HHHHHHHHCCCcEEEEeeeccCCCCccCCCCCCc
Confidence 77777777 9999999999866556676666663
No 325
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=74.61 E-value=3.8 Score=35.02 Aligned_cols=33 Identities=18% Similarity=0.060 Sum_probs=28.6
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 70 r~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~ 103 (291)
T 3a5f_A 70 RIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVI 103 (291)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEc
Confidence 4799999988899999999998876 89999984
No 326
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=74.58 E-value=11 Score=33.17 Aligned_cols=95 Identities=16% Similarity=0.124 Sum_probs=55.0
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEe-cCCCchhhhhcccccccc---------cCCHHH
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDI-NIGCPQMVAKRGHYGAYL---------QDDWPL 169 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idi-n~gCP~~~~~~~g~G~~l---------~~~p~~ 169 (240)
++.+..+.. ...++++.+ .+++ ++.+..+.++|+|-+ +..+ .++.|... ...++.
T Consensus 135 ~~~i~~~~~----~g~~v~~~v--~t~~---~a~~a~~~GaD~i~v~g~~~------GGh~g~~~~~~~~~~~~~~~~~~ 199 (369)
T 3bw2_A 135 REVIARLRR----AGTLTLVTA--TTPE---EARAVEAAGADAVIAQGVEA------GGHQGTHRDSSEDDGAGIGLLSL 199 (369)
T ss_dssp HHHHHHHHH----TTCEEEEEE--SSHH---HHHHHHHTTCSEEEEECTTC------SEECCCSSCCGGGTTCCCCHHHH
T ss_pred HHHHHHHHH----CCCeEEEEC--CCHH---HHHHHHHcCCCEEEEeCCCc------CCcCCCcccccccccccccHHHH
Confidence 455555543 245666665 3444 333444568999988 4321 01112211 123666
Q ss_pred HHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 170 LTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 170 i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
+.++.+. .++||.+=..+.+..+..+.+..|+|+|.+ ||.
T Consensus 200 l~~i~~~---------------~~iPViaaGGI~~~~~~~~~l~~GAd~V~v-Gs~ 239 (369)
T 3bw2_A 200 LAQVREA---------------VDIPVVAAGGIMRGGQIAAVLAAGADAAQL-GTA 239 (369)
T ss_dssp HHHHHHH---------------CSSCEEEESSCCSHHHHHHHHHTTCSEEEE-SHH
T ss_pred HHHHHHh---------------cCceEEEECCCCCHHHHHHHHHcCCCEEEE-ChH
Confidence 6666543 467888877776667777777679999998 553
No 327
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=74.49 E-value=9.8 Score=32.11 Aligned_cols=82 Identities=6% Similarity=-0.057 Sum_probs=47.9
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCC-CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHC-DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~-d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.++++-+--.+.++..++++.+...+ +.+.+|.- .-. . .-++.++++.+ . +
T Consensus 5 ~~LivALD~~~~~~al~l~~~l~~~v~~~~KvG~~--l~~--~--------~G~~~v~~Lk~----~------------g 56 (259)
T 3tfx_A 5 RPVIVALDLDNEEQLNKILSKLGDPHDVFVKVGME--LFY--N--------AGIDVIKKLTQ----Q------------G 56 (259)
T ss_dssp CCEEEECCCSCHHHHHHHHHTTCCGGGCEEEECHH--HHH--H--------HCHHHHHHHHH----T------------T
T ss_pred CCeEEEeCCCCHHHHHHHHHHhCcccceEEEeCHH--HHH--h--------cCHHHHHHHHH----C------------C
Confidence 35666654456666666666665556 77777544 111 1 12344444433 2 2
Q ss_pred eeeE--Eeee-hhcHH-HHHHHHhC-CCCeEEEecc
Q psy7344 194 INIG--CPQM-VAKRG-HYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 194 ~pvs--vK~r-~~~~~-~~~~~l~~-G~~~itih~R 224 (240)
.+|. .|+- +.+|. ..++.+.+ |+|.+|+|+=
T Consensus 57 ~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~ 92 (259)
T 3tfx_A 57 YKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHAL 92 (259)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG
T ss_pred CcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCC
Confidence 3444 5544 55664 56778888 9999999984
No 328
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=74.34 E-value=6.3 Score=31.66 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=52.3
Q ss_pred hhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhccccccc-ccCCHHHHHHHHHHhhh
Q psy7344 101 PLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAY-LQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 101 eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~-l~~~p~~i~~iv~~~~~ 179 (240)
++++.+.... + +.++.+.+ .+++ ++.+..+.|+|.|.++...... ...+.. ...+++.++++.+.
T Consensus 108 ~~i~~~~~~~-~-~~~v~~~~--~t~~---e~~~~~~~G~d~i~~~~~g~t~----~~~~~~~~~~~~~~~~~~~~~--- 173 (223)
T 1y0e_A 108 ELVSYIRTHA-P-NVEIMADI--ATVE---EAKNAARLGFDYIGTTLHGYTS----YTQGQLLYQNDFQFLKDVLQS--- 173 (223)
T ss_dssp HHHHHHHHHC-T-TSEEEEEC--SSHH---HHHHHHHTTCSEEECTTTTSST----TSTTCCTTHHHHHHHHHHHHH---
T ss_pred HHHHHHHHhC-C-CceEEecC--CCHH---HHHHHHHcCCCEEEeCCCcCcC----CCCCCCCCcccHHHHHHHHhh---
Confidence 4444444332 1 34454433 3444 3444445689999875432211 111110 12345555555543
Q ss_pred ccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEecc
Q psy7344 180 VHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGK 224 (240)
Q Consensus 180 ~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R 224 (240)
.++||.+-..+.+..++.+.++.|++++.+ ||
T Consensus 174 ------------~~ipvia~GGI~~~~~~~~~~~~Gad~v~v-G~ 205 (223)
T 1y0e_A 174 ------------VDAKVIAEGNVITPDMYKRVMDLGVHCSVV-GG 205 (223)
T ss_dssp ------------CCSEEEEESSCCSHHHHHHHHHTTCSEEEE-CH
T ss_pred ------------CCCCEEEecCCCCHHHHHHHHHcCCCEEEE-Ch
Confidence 466888877776666676666569999988 65
No 329
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=74.24 E-value=6.4 Score=32.17 Aligned_cols=74 Identities=8% Similarity=0.068 Sum_probs=44.7
Q ss_pred HHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHH
Q psy7344 128 NLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRG 206 (240)
Q Consensus 128 ~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~ 206 (240)
+..+.++.+++ +++.|=++-- . + .|.....|++.++++.+. +++||.+-..+.+..
T Consensus 145 ~~~e~~~~~~~~G~~~i~~t~~-----~-~--~g~~~g~~~~~i~~l~~~---------------~~iPvia~GGI~~~~ 201 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVHTEI-----E-K--DGTLQEHDFSLTKKIAIE---------------AEVKVLAAGGISSEN 201 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEEEET-----T-H--HHHTCCCCHHHHHHHHHH---------------HTCEEEEESSCCSHH
T ss_pred CHHHHHHHHHhCCCCEEEEEee-----c-c--cccCCcCCHHHHHHHHHh---------------cCCcEEEECCCCCHH
Confidence 45566666544 7777655311 1 1 121123589998888875 345777666666666
Q ss_pred HHHHHHhC-----C-CCeEEEeccc
Q psy7344 207 HYGAYLQD-----D-WPLLTELGKM 225 (240)
Q Consensus 207 ~~~~~l~~-----G-~~~itih~R~ 225 (240)
++.+.++. | ++++.+ ||-
T Consensus 202 d~~~~~~~~~~~~G~adgv~v-gsa 225 (241)
T 1qo2_A 202 SLKTAQKVHTETNGLLKGVIV-GRA 225 (241)
T ss_dssp HHHHHHHHHHHTTTSEEEEEE-CHH
T ss_pred HHHHHHhcccccCCeEeEEEe-eHH
Confidence 66666554 9 999988 653
No 330
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=74.08 E-value=7.3 Score=33.52 Aligned_cols=33 Identities=6% Similarity=-0.212 Sum_probs=28.3
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
..|+++.+++++..+..+.++..++ |+|++.+-
T Consensus 83 r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~ 116 (307)
T 3s5o_A 83 NRLLLAGSGCESTQATVEMTVSMAQVGADAAMVV 116 (307)
T ss_dssp TSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 4689999888899999999998876 89999983
No 331
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=74.07 E-value=20 Score=31.63 Aligned_cols=85 Identities=11% Similarity=-0.005 Sum_probs=58.4
Q ss_pred CCceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
..|+...+...+++++.+.++.+ +.|+..+-+..||+.. ..+++.-.+.++++++++ +.
T Consensus 134 ~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~---------G~ 193 (386)
T 3fv9_G 134 PVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA-----------EGGPALDAERITACLADR---------QP 193 (386)
T ss_dssp CBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTC---------CT
T ss_pred ceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHc---------CC
Confidence 35777777778899888766654 6799999999997532 135666667788888862 13
Q ss_pred CeeeEEeee--h--hcHHHHHHHH-hC-CCCeE
Q psy7344 193 DINIGCPQM--V--AKRGHYGAYL-QD-DWPLL 219 (240)
Q Consensus 193 ~~pvsvK~r--~--~~~~~~~~~l-~~-G~~~i 219 (240)
++++.+... + ++..++++.| +. ++ +|
T Consensus 194 ~~~L~vDaN~~~~~~~A~~~~~~l~~~~~i-~i 225 (386)
T 3fv9_G 194 GEWYLADANNGLTVEHALRMLSLLPPGLDI-VL 225 (386)
T ss_dssp TCEEEEECTTCCCHHHHHHHHHHSCSSCCC-EE
T ss_pred CCeEEEECCCCCCHHHHHHHHHHhhccCCc-EE
Confidence 455555544 3 4667888888 66 77 55
No 332
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=73.96 E-value=7.8 Score=33.36 Aligned_cols=84 Identities=18% Similarity=0.063 Sum_probs=49.4
Q ss_pred CCceeEEeecCCHHHHHHHHHHHccCCCEEEe-cCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDI-NIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~~~d~Idi-n~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
..|++.++ .+++ ++.+..+.++|+|-+ +..+ .++.|..-..+|+.+.++.+ . .
T Consensus 118 gi~vi~~v--~t~~---~a~~~~~~GaD~i~v~g~~~------GG~~G~~~~~~~~~l~~v~~----~-----------~ 171 (328)
T 2gjl_A 118 GVKVIHKC--TAVR---HALKAERLGVDAVSIDGFEC------AGHPGEDDIPGLVLLPAAAN----R-----------L 171 (328)
T ss_dssp TCEEEEEE--SSHH---HHHHHHHTTCSEEEEECTTC------SBCCCSSCCCHHHHHHHHHT----T-----------C
T ss_pred CCCEEeeC--CCHH---HHHHHHHcCCCEEEEECCCC------CcCCCCccccHHHHHHHHHH----h-----------c
Confidence 45676654 3333 333444568999987 3321 11123212356666655554 3 4
Q ss_pred CeeeEEeeehhcHHHHHHHHhCCCCeEEEecc
Q psy7344 193 DINIGCPQMVAKRGHYGAYLQDDWPLLTELGK 224 (240)
Q Consensus 193 ~~pvsvK~r~~~~~~~~~~l~~G~~~itih~R 224 (240)
++||.+-..+.+..+..+.+..|++++.+ ||
T Consensus 172 ~iPviaaGGI~~~~~v~~al~~GAdgV~v-Gs 202 (328)
T 2gjl_A 172 RVPIIASGGFADGRGLVAALALGADAINM-GT 202 (328)
T ss_dssp CSCEEEESSCCSHHHHHHHHHHTCSEEEE-SH
T ss_pred CCCEEEECCCCCHHHHHHHHHcCCCEEEE-CH
Confidence 67888877776666666666559999988 54
No 333
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=73.82 E-value=12 Score=30.59 Aligned_cols=73 Identities=12% Similarity=-0.003 Sum_probs=45.3
Q ss_pred HHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHH
Q psy7344 129 LTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGH 207 (240)
Q Consensus 129 ~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~ 207 (240)
..+.++.+++ |++.|=++.- .+. |.....|++.++++.+. .++||.+-..+.+..+
T Consensus 154 ~~e~~~~~~~~G~~~i~~~~~------~~~--g~~~g~~~~~i~~l~~~---------------~~ipvia~GGI~~~~d 210 (252)
T 1ka9_F 154 AVEWAVKGVELGAGEILLTSM------DRD--GTKEGYDLRLTRMVAEA---------------VGVPVIASGGAGRMEH 210 (252)
T ss_dssp HHHHHHHHHHHTCCEEEEEET------TTT--TTCSCCCHHHHHHHHHH---------------CSSCEEEESCCCSHHH
T ss_pred HHHHHHHHHHcCCCEEEEecc------cCC--CCcCCCCHHHHHHHHHH---------------cCCCEEEeCCCCCHHH
Confidence 4455555544 7887765411 111 22223589988888765 4567777766766667
Q ss_pred HHHHHhCCCCeEEEeccc
Q psy7344 208 YGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 208 ~~~~l~~G~~~itih~R~ 225 (240)
+.+.++.|++++.+ ||.
T Consensus 211 ~~~~~~~Gadgv~v-gsa 227 (252)
T 1ka9_F 211 FLEAFQAGAEAALA-ASV 227 (252)
T ss_dssp HHHHHHTTCSEEEE-SHH
T ss_pred HHHHHHCCCHHHHH-HHH
Confidence 76666339999988 653
No 334
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=73.44 E-value=15 Score=30.07 Aligned_cols=95 Identities=11% Similarity=-0.080 Sum_probs=54.0
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEec-CCCchhhhhcccccccccCCHHHHHHHHHHh
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDIN-IGCPQMVAKRGHYGAYLQDDWPLLTNLVYSP 177 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin-~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~ 177 (240)
+++.+.++....+....++.+.+ .+. .++.+..+.|+|.|-+| .|.... .+ ....+++.++++.+.
T Consensus 114 ~p~~l~~~i~~~~~~g~~v~~~v--~t~---eea~~a~~~Gad~Ig~~~~g~t~~----~~---~~~~~~~li~~l~~~- 180 (229)
T 3q58_A 114 RPVDIDSLLTRIRLHGLLAMADC--STV---NEGISCHQKGIEFIGTTLSGYTGP----IT---PVEPDLAMVTQLSHA- 180 (229)
T ss_dssp CSSCHHHHHHHHHHTTCEEEEEC--SSH---HHHHHHHHTTCSEEECTTTTSSSS----CC---CSSCCHHHHHHHHTT-
T ss_pred ChHHHHHHHHHHHHCCCEEEEec--CCH---HHHHHHHhCCCCEEEecCccCCCC----Cc---CCCCCHHHHHHHHHc-
Confidence 34555555444433344455443 333 34445556699999654 332111 01 124688888877653
Q ss_pred hhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEE
Q psy7344 178 NMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTE 221 (240)
Q Consensus 178 ~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~iti 221 (240)
. +||.+-..+.+..++.+.++.|++++.+
T Consensus 181 --~-------------ipvIA~GGI~t~~d~~~~~~~GadgV~V 209 (229)
T 3q58_A 181 --G-------------CRVIAEGRYNTPALAANAIEHGAWAVTV 209 (229)
T ss_dssp --T-------------CCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred --C-------------CCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 3 3566655566666776666669999988
No 335
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=73.20 E-value=14 Score=31.42 Aligned_cols=30 Identities=10% Similarity=0.127 Sum_probs=25.7
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCEEEec
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDGIDIN 146 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~Idin 146 (240)
+++.+++++..+..+.++..++ |+|++.+-
T Consensus 68 ViaGvg~~~t~~ai~la~~A~~~Gadavlv~ 98 (288)
T 2nuw_A 68 LIFQVGSLNLNDVMELVKFSNEMDILGVSSH 98 (288)
T ss_dssp EEEECCCSCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEc
Confidence 7788878899999999998876 89999984
No 336
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=73.01 E-value=18 Score=31.75 Aligned_cols=81 Identities=7% Similarity=-0.040 Sum_probs=53.1
Q ss_pred CceeEEeecCCHHHHHHHHH-HHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+...+++++.+.++ .+++|+..+-+..|+ .+++.-.+.++++++++ +.+
T Consensus 136 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avR~~~---------g~~ 191 (377)
T 3my9_A 136 IPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGV---------------KPHAEELRILETMRGEF---------GER 191 (377)
T ss_dssp EEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHH---------GGG
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCC---------------CcHHHHHHHHHHHHHHh---------CCC
Confidence 45555555567877666554 456688888887773 13344445666666652 124
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+++.+... .++..++++.|++ |+++|
T Consensus 192 ~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i 222 (377)
T 3my9_A 192 IDLRLDFNQALTPFGAMKILRDVDAFRPTFI 222 (377)
T ss_dssp SEEEEECTTCCCTTTHHHHHHHHHTTCCSCE
T ss_pred CeEEEeCCCCcCHHHHHHHHHHHhhcCCCEE
Confidence 56665554 4578899999999 99988
No 337
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=72.97 E-value=24 Score=31.59 Aligned_cols=97 Identities=9% Similarity=-0.003 Sum_probs=59.0
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhh------ccccccccc--CCHHHHHHHHHHhhhcccccc
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAK------RGHYGAYLQ--DDWPLLTNLVYSPNMVHFVIA 185 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~------~~g~G~~l~--~~p~~i~~iv~~~~~~~~~i~ 185 (240)
.|+...+.+.+++++.+.++.+ ++|+..+-+..|.+..... ...-|..+. .+.+...++++++++++
T Consensus 144 v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~av---- 219 (422)
T 3tji_A 144 IPAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKY---- 219 (422)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH----
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHc----
Confidence 4655555668899888766654 6799999988885321000 000111110 01344456677777763
Q ss_pred CCCCCCCCeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 186 EPHCDGNDINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 186 ~~~~~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+.++++.+... .++..++++.|++ |+.+|-
T Consensus 220 -----G~d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE 254 (422)
T 3tji_A 220 -----GWKLHILHDVHERLFPQQAVQLAKQLEPFQPYFIE 254 (422)
T ss_dssp -----CSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE
T ss_pred -----CCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEE
Confidence 13567766655 4567899999999 998873
No 338
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=72.94 E-value=9.7 Score=31.51 Aligned_cols=81 Identities=10% Similarity=-0.009 Sum_probs=48.8
Q ss_pred ceeEEeecCCHHHHHHHHHHHcc-C--CCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 116 GHSLMFCGNDSKNLTEAAKLAEP-H--CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~le~-~--~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
++++. -|..++.++.+.+++ + ++.+.++..- .. .+| |+ +++.+++. +.
T Consensus 6 ~lila---lD~~~l~~~~~~v~~~~~~v~~~Kv~~d~--~~----~~G------~~----~v~~lr~~----------~~ 56 (246)
T 2yyu_A 6 PFIVA---LDFPSKQEVERFLRPFAGTPLFVKVGMEL--YY----QEG------PA----IVAFLKEQ----------GH 56 (246)
T ss_dssp CEEEE---CCCSSHHHHHHHHGGGTTSCCEEEECHHH--HH----HHT------HH----HHHHHHHT----------TC
T ss_pred CeEEE---eCCCCHHHHHHHHHHhcccccEEEeCHHH--HH----HhC------HH----HHHHHHHC----------CC
Confidence 45554 455556667777765 3 5777775542 11 122 33 34444443 15
Q ss_pred CeeeEEeee-hhcH-HHHHHHHhC-CCCeEEEeccc
Q psy7344 193 DINIGCPQM-VAKR-GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 193 ~~pvsvK~r-~~~~-~~~~~~l~~-G~~~itih~R~ 225 (240)
.+++-+|+- +.++ ..+++.+.+ |+|.+|+|+=.
T Consensus 57 ~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~~ 92 (246)
T 2yyu_A 57 AVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAAG 92 (246)
T ss_dssp EEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGGG
T ss_pred eEEEEeecccchHHHHHHHHHHHhcCCCEEEEECCC
Confidence 678899998 3333 347778888 99999999744
No 339
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=72.76 E-value=12 Score=31.81 Aligned_cols=87 Identities=11% Similarity=0.061 Sum_probs=52.1
Q ss_pred CHHHHHH-HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh-
Q psy7344 125 DSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV- 202 (240)
Q Consensus 125 d~~~~~~-aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~- 202 (240)
+.+...+ +.+++++|+|.||||.- . .+. |+.....-|.+.+++-.++.. ...++|+|+-++-
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGge-S----TRP--ga~~vs~eeE~~Rv~pvi~~l---------~~~~v~iSIDT~~~ 91 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGV-S----TRP--GHEMVTLEEELNRVLPVVEAI---------VGFDVKISVDTFRS 91 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESC-C----CST--TCCCCCHHHHHHHHHHHHHHH---------TTSSSEEEEECSCH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCc-c----CCC--CCCCCchHHHHHHHHHHHHHh---------hcCCCeEEEECCCH
Confidence 4454444 45566789999999733 1 122 333344445555555444432 0146899998871
Q ss_pred --------------hc------HHHHHHHHhC-CCCeEEEeccccc
Q psy7344 203 --------------AK------RGHYGAYLQD-DWPLLTELGKMAM 227 (240)
Q Consensus 203 --------------~~------~~~~~~~l~~-G~~~itih~R~~~ 227 (240)
.+ -.++++.+.+ |+..+..|.|...
T Consensus 92 ~Va~~al~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p 137 (270)
T 4hb7_A 92 EVAEACLKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGN 137 (270)
T ss_dssp HHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSC
T ss_pred HHHHHHHHhccceeccccccccchhHHHHHHHcCCCeEEeccccCC
Confidence 11 1357777788 9999999976543
No 340
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=72.74 E-value=3.2 Score=35.87 Aligned_cols=84 Identities=13% Similarity=0.034 Sum_probs=45.4
Q ss_pred CHHHHHH-HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~-aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+.+...+ +.+++++|+|.||||.-- .+. |+......+.+++++..++... . .++|+|+-..
T Consensus 50 ~~~~a~~~a~~~v~~GAdIIDIGgeS-----TrP--ga~~v~~~eE~~Rv~pvI~~l~--------~-~~vpiSIDT~~~ 113 (294)
T 2dqw_A 50 DPERALERAREMVAEGADILDLGAES-----TRP--GAAPVPVEEEKRRLLPVLEAVL--------S-LGVPVSVDTRKP 113 (294)
T ss_dssp ---CCHHHHHHHHHHTCSEEEEECC------------------CCHHHHHHHHHHHHH--------T-TCSCEEEECSCH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCc-----CCC--CCCCCCHHHHHHHHHHHHHHHH--------h-CCCeEEEECCCH
Confidence 4444444 455667899999998731 111 2222233444444444444320 0 2668888766
Q ss_pred -------------hh-----cHHHHHHHHhC-CCCeEEEecc
Q psy7344 202 -------------VA-----KRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 202 -------------~~-----~~~~~~~~l~~-G~~~itih~R 224 (240)
+. ...++++.+.+ |+..+.+|.|
T Consensus 114 ~Va~aAl~aGa~iINdVsg~~d~~m~~v~a~~~~~vVlmh~~ 155 (294)
T 2dqw_A 114 EVAEEALKLGAHLLNDVTGLRDERMVALAARHGVAAVVMHMP 155 (294)
T ss_dssp HHHHHHHHHTCSEEECSSCSCCHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHhCCCEEEECCCCCChHHHHHHHHhCCCEEEEcCC
Confidence 11 13567788888 9999999987
No 341
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=72.73 E-value=26 Score=30.83 Aligned_cols=80 Identities=8% Similarity=-0.072 Sum_probs=52.0
Q ss_pred CceeEEeecCCHHHHHHHHH-HHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAK-LAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~-~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+...+++++.+.++ .+++|+..+-+..|. .+++.-.+.++++++++ .+
T Consensus 138 v~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avR~a~----------~~ 192 (385)
T 3i6e_A 138 IPLSCSIANPDFDADIALMERLRADGVGLIKLKTGF---------------RDHAFDIMRLELIARDF----------PE 192 (385)
T ss_dssp EEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSS---------------SCHHHHHHHHHHHHHHC----------TT
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHhC----------CC
Confidence 46655665567777665444 456788888887773 13334445666666652 23
Q ss_pred eeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 194 INIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 194 ~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+++.+... .++..++++.|++ |+.+|
T Consensus 193 ~~l~vDan~~~~~~~A~~~~~~L~~~~i~~i 223 (385)
T 3i6e_A 193 FRVRVDYNQGLEIDEAVPRVLDVAQFQPDFI 223 (385)
T ss_dssp SEEEEECTTCCCGGGHHHHHHHHHTTCCSCE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 45555443 4567899999999 99987
No 342
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=72.69 E-value=5.4 Score=34.45 Aligned_cols=55 Identities=9% Similarity=-0.161 Sum_probs=38.7
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CC-CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HC-DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~-d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+ |++.+- .|.- ...+.+.+.+-.+.+.++
T Consensus 76 rvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~--~P~y----------~~~s~~~l~~~f~~va~a 132 (311)
T 3h5d_A 76 RVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAI--VPYY----------NKPSQEGMYQHFKAIADA 132 (311)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEE--CCCS----------SCCCHHHHHHHHHHHHHS
T ss_pred CCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEc--CCCC----------CCCCHHHHHHHHHHHHHh
Confidence 4799999988899999999999877 76 999983 2332 112455555666666555
No 343
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=72.41 E-value=10 Score=34.00 Aligned_cols=84 Identities=11% Similarity=0.017 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccc-cCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee
Q psy7344 124 NDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYL-QDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM 201 (240)
Q Consensus 124 ~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l-~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r 201 (240)
.+++++.+.++. ++.|+..+-+..|++... ..|... ..+++...+.++++++++ +.++++.+...
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~---------G~d~~l~vDaN 209 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTA----YSGHQLSLEVLDRCELFCRRVREAV---------GSKADLLFGTH 209 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBT----TCCBCCCHHHHHHHHHHHHHHHHHH---------TTSSEEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcc----ccccccchhhHHHHHHHHHHHHHHh---------CCCCeEEEECC
Confidence 478887776555 467999999999876431 111110 123555567777888763 13566666554
Q ss_pred ----hhcHHHHHHHHhC-CCCeEE
Q psy7344 202 ----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 202 ----~~~~~~~~~~l~~-G~~~it 220 (240)
.++..++++.|++ |+++|-
T Consensus 210 ~~~~~~~A~~~~~~L~~~~i~~iE 233 (412)
T 4e4u_A 210 GQMVPSSAIRLAKRLEKYDPLWFE 233 (412)
T ss_dssp SCBCHHHHHHHHHHHGGGCCSEEE
T ss_pred CCCCHHHHHHHHHHhhhcCCcEEE
Confidence 3567889999999 998874
No 344
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=72.39 E-value=7.9 Score=35.39 Aligned_cols=63 Identities=13% Similarity=0.019 Sum_probs=41.0
Q ss_pred HHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC-CeeeEEeeehhcHHHHH
Q psy7344 131 EAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN-DINIGCPQMVAKRGHYG 209 (240)
Q Consensus 131 ~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~-~~pvsvK~r~~~~~~~~ 209 (240)
.+..+++.|+|.|.++.+ . | ++....++++++++. . ++||.++.- .+.+.+
T Consensus 241 ~a~~l~~aGvd~v~i~~~--------~--G-----~~~~~~e~i~~i~~~-----------~p~~pvi~g~~--~t~e~a 292 (494)
T 1vrd_A 241 RVEKLVKAGVDVIVIDTA--------H--G-----HSRRVIETLEMIKAD-----------YPDLPVVAGNV--ATPEGT 292 (494)
T ss_dssp HHHHHHHTTCSEEEECCS--------C--C-----SSHHHHHHHHHHHHH-----------CTTSCEEEEEE--CSHHHH
T ss_pred HHHHHHHhCCCEEEEEec--------C--C-----chHHHHHHHHHHHHH-----------CCCceEEeCCc--CCHHHH
Confidence 344445668999999765 1 1 233444566666666 3 578887643 234556
Q ss_pred HHHhC-CCCeEEE
Q psy7344 210 AYLQD-DWPLLTE 221 (240)
Q Consensus 210 ~~l~~-G~~~iti 221 (240)
+.+++ |+|+|.+
T Consensus 293 ~~l~~~G~d~I~v 305 (494)
T 1vrd_A 293 EALIKAGADAVKV 305 (494)
T ss_dssp HHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 88888 9999998
No 345
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=72.14 E-value=8.7 Score=34.64 Aligned_cols=70 Identities=17% Similarity=0.149 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++++.+.++.+ +.|++.|.|..|+ +++...++++++++++ +.++++.+...
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~---------G~d~~l~vDan~~ 252 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGA----------------NVQDDIRRCRLARAAI---------GPDIAMAVDANQR 252 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHH---------CSSSEEEEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCC----------------CHHHHHHHHHHHHHhc---------CCCCeEEEECCCC
Confidence 788777766554 6699999998773 3445556777777752 13456655443
Q ss_pred --hhcHHHHHHHHhC-CCCeE
Q psy7344 202 --VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 --~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 253 ~~~~~a~~~~~~l~~~~i~~i 273 (441)
T 2hxt_A 253 WDVGPAIDWMRQLAEFDIAWI 273 (441)
T ss_dssp CCHHHHHHHHHTTGGGCCSCE
T ss_pred CCHHHHHHHHHHHHhcCCCee
Confidence 3567889999999 99987
No 346
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=72.09 E-value=6.6 Score=34.02 Aligned_cols=32 Identities=6% Similarity=-0.090 Sum_probs=28.5
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEe
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDI 145 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idi 145 (240)
..|+++.+++++..+..+.++..++ |+|++.+
T Consensus 80 rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv 112 (318)
T 3qfe_A 80 DFPIMAGVGAHSTRQVLEHINDASVAGANYVLV 112 (318)
T ss_dssp TSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4799999988999999999999876 8999998
No 347
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=71.16 E-value=7.1 Score=32.49 Aligned_cols=33 Identities=3% Similarity=-0.157 Sum_probs=23.5
Q ss_pred CCeeeEEeee-hhcHH-HHHHHHhC-CCCeEEEecc
Q psy7344 192 NDINIGCPQM-VAKRG-HYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 192 ~~~pvsvK~r-~~~~~-~~~~~l~~-G~~~itih~R 224 (240)
..+-+-.|+- +.+|. ..++.+.+ |+|.+|+|+=
T Consensus 60 ~~iflDlK~~DI~nTv~~~~~~~~~~gad~vTvh~~ 95 (239)
T 3tr2_A 60 YRIFLDLKFYDIPQTVAGACRAVAELGVWMMNIHIS 95 (239)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGG
T ss_pred CCEEEEecccccchHHHHHHHHHHhCCCCEEEEecc
Confidence 3445567764 55664 46778888 9999999974
No 348
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=70.38 E-value=5.6 Score=36.66 Aligned_cols=92 Identities=16% Similarity=0.038 Sum_probs=51.8
Q ss_pred HHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHH
Q psy7344 127 KNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRG 206 (240)
Q Consensus 127 ~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~ 206 (240)
.+...+..+++.|+|+|.++.|.-...+.+.-.|. .......+.++.+++++.... .+.++||.+-..+.+-.
T Consensus 293 ~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~-g~p~~~~l~~v~~~~~~~~~~------~~~~ipvia~GGi~~~~ 365 (503)
T 1me8_A 293 VDGEGFRYLADAGADFIKIGIGGGSICITREQKGI-GRGQATAVIDVVAERNKYFEE------TGIYIPVCSDGGIVYDY 365 (503)
T ss_dssp CSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCC-CCCHHHHHHHHHHHHHHHHHH------HSEECCEEEESCCCSHH
T ss_pred cCHHHHHHHHHhCCCeEEecccCCcCcccccccCC-CCchHHHHHHHHHHHHHHhhh------cCCCceEEEeCCCCCHH
Confidence 33334445556689999998762111111100011 123456666776655431000 00146787766777888
Q ss_pred HHHHHHhCCCCeEEEeccc
Q psy7344 207 HYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 207 ~~~~~l~~G~~~itih~R~ 225 (240)
+.++++..||+++.+-.+.
T Consensus 366 di~kAlalGA~~V~iG~~~ 384 (503)
T 1me8_A 366 HMTLALAMGADFIMLGRYF 384 (503)
T ss_dssp HHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHcCCCEEEECchh
Confidence 9999998899999994443
No 349
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=70.24 E-value=14 Score=31.34 Aligned_cols=52 Identities=17% Similarity=0.079 Sum_probs=36.0
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhccccccccc-CCHHHHHHHHHHhhhc
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQ-DDWPLLTNLVYSPNMV 180 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~-~~p~~i~~iv~~~~~~ 180 (240)
+++.+++++..+..+.++..++ |+|++.+- .|.- .. .+.+.+.+-.+.+.++
T Consensus 68 viaGvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y----------~~~~s~~~l~~~f~~va~a 121 (293)
T 1w3i_A 68 IIFQVGGLNLDDAIRLAKLSKDFDIVGIASY--APYY----------YPRMSEKHLVKYFKTLCEV 121 (293)
T ss_dssp EEEECCCSCHHHHHHHHHHGGGSCCSEEEEE--CCCS----------CSSCCHHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCEEEEc--CCCC----------CCCCCHHHHHHHHHHHHhh
Confidence 7788888899999999999876 89999984 2332 11 2455555555555555
No 350
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=70.03 E-value=12 Score=33.21 Aligned_cols=82 Identities=11% Similarity=0.148 Sum_probs=52.5
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecC----CCchhhhhccccccccc--CCHHHHHHHHHHhhhccccccCCCCCCCCeeeE
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINI----GCPQMVAKRGHYGAYLQ--DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIG 197 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~----gCP~~~~~~~g~G~~l~--~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvs 197 (240)
+++++.+.++.+ +.|+++|.+.. |.... . +|..+. .+++...++++++++++ +.++++.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~----~-~~G~~~~~~~~~~~~e~v~avRea~---------G~d~~l~ 214 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHR----D-FWNGAISPREHEAMVARVAAVREAV---------GPEVEVA 214 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCS----C-SSSCCCCHHHHHHHHHHHHHHHHHH---------CSSSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccC----C-cCccccchhhHHHHHHHHHHHHHhc---------CCCCEEE
Confidence 677777665554 66999999987 53211 0 222232 24566667888888763 1355666
Q ss_pred Eeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 198 CPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 198 vK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+... .++..++++.|++ |+++|-
T Consensus 215 vDan~~~~~~~a~~~~~~l~~~~i~~iE 242 (410)
T 2qq6_A 215 IDMHGRFDIPSSIRFARAMEPFGLLWLE 242 (410)
T ss_dssp EECTTCCCHHHHHHHHHHHGGGCCSEEE
T ss_pred EECCCCCCHHHHHHHHHHHhhcCCCeEE
Confidence 6544 3567889999999 999874
No 351
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=69.95 E-value=13 Score=31.94 Aligned_cols=46 Identities=9% Similarity=-0.088 Sum_probs=30.3
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecC-CHHHHHHHHHHHcc-CC-CEEEecCC
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGN-DSKNLTEAAKLAEP-HC-DGIDINIG 148 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~-d~~~~~~aa~~le~-~~-d~Idin~g 148 (240)
+.++++++-. ...|++++-+.. +++++..+++.+.. |. +.+=+-||
T Consensus 121 n~~Ll~~~a~----~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg 169 (292)
T 1o60_A 121 QTDLVEAMAK----TGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRG 169 (292)
T ss_dssp CHHHHHHHHH----TTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECC
T ss_pred CHHHHHHHHc----CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 4455555431 257999997654 89999999998865 53 44445455
No 352
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=69.83 E-value=12 Score=32.27 Aligned_cols=54 Identities=13% Similarity=0.060 Sum_probs=39.0
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.+++++..+..+.++..++ |+|++.+ -.|.- . .+.+.+.+-.+++.++
T Consensus 76 rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv--~~P~~----------~-~s~~~l~~~f~~va~a 130 (313)
T 3dz1_A 76 SMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMI--APPPS----------L-RTDEQITTYFRQATEA 130 (313)
T ss_dssp TSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEE--CCCTT----------C-CSHHHHHHHHHHHHHH
T ss_pred CCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEE--CCCCC----------C-CCHHHHHHHHHHHHHh
Confidence 5799999888899999999998876 8999998 23541 0 2455555555555554
No 353
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=69.56 E-value=22 Score=29.41 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=44.2
Q ss_pred HHHHHHHHccCCCEEEe--cCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-----
Q psy7344 129 LTEAAKLAEPHCDGIDI--NIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM----- 201 (240)
Q Consensus 129 ~~~aa~~le~~~d~Idi--n~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r----- 201 (240)
..++...++.|+|.||+ |.| +.+-.+|+.+.+-+.++++.. ...| +|.-
T Consensus 83 ~~E~~~Ai~~GAdEIDmVinig------------~lk~g~~~~v~~ei~~v~~a~----------~~~~--lKvIiEt~~ 138 (231)
T 3ndo_A 83 ATEAELAVAAGATEIDMVIDVG------------AALAGDLDAVSADITAVRKAV----------RAAT--LKVIVESAA 138 (231)
T ss_dssp HHHHHHHHHTTCSEEEEECCHH------------HHHTTCHHHHHHHHHHHHHHT----------TTSE--EEEECCHHH
T ss_pred HHHHHHHHHcCCCEEEEEeehH------------hhhcccHHHHHHHHHHHHHHc----------cCCc--eEEEEECcc
Confidence 44566667889999995 444 222468998888888888872 1223 3554
Q ss_pred h----h--cHHHHHHHHhC-CCCeEEE
Q psy7344 202 V----A--KRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 202 ~----~--~~~~~~~~l~~-G~~~iti 221 (240)
+ + .....++...+ |+|+|--
T Consensus 139 L~~~~t~eei~~a~~ia~~aGADfVKT 165 (231)
T 3ndo_A 139 LLEFSGEPLLADVCRVARDAGADFVKT 165 (231)
T ss_dssp HHHHTCHHHHHHHHHHHHHTTCSEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHHCcCEEEc
Confidence 2 1 22456666678 9999843
No 354
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=69.55 E-value=31 Score=30.89 Aligned_cols=93 Identities=17% Similarity=0.195 Sum_probs=58.0
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhccccccc------------cc--------CCHHHHHHH
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAY------------LQ--------DDWPLLTNL 173 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~------------l~--------~~p~~i~~i 173 (240)
.|+...+.+.+++++.+.++.+ ++|+..+-+-.|-|.... .+|.. .. .+.+...++
T Consensus 139 v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~---~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~ 215 (424)
T 3v3w_A 139 ILSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAK---TYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDV 215 (424)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSC---CTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHH
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccccc---cccccccccccccccccccccccccchhHHHHHHHH
Confidence 4665556667899888766654 678999888776432100 00000 00 013455667
Q ss_pred HHHhhhccccccCCCCCCCCeeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 174 VYSPNMVHFVIAEPHCDGNDINIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 174 v~~~~~~~~~i~~~~~~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
++++++++ +.++++.+... .++.+++++.|++ |+++|
T Consensus 216 v~avR~av---------G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~i 257 (424)
T 3v3w_A 216 FAAVRKEF---------GPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWM 257 (424)
T ss_dssp HHHHHHHH---------CSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEE
T ss_pred HHHHHHHc---------CCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 78888763 13567766554 4567899999999 99988
No 355
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=69.49 E-value=7.5 Score=32.72 Aligned_cols=84 Identities=5% Similarity=-0.041 Sum_probs=46.1
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
.++++-+--.+.++..+.++.+...++.+.+|.- .-. . +| |+ +++.+++. +..+
T Consensus 28 ~~LivALD~~~~~~al~l~~~l~~~v~~~KvG~~--l~~--~--~G------~~----~v~~Lk~~----------g~~V 81 (255)
T 3ldv_A 28 PKVIVALDYDNLADALAFVDKIDPSTCRLKVGKE--MFT--L--FG------PD----FVRELHKR----------GFSV 81 (255)
T ss_dssp CCEEEEECCSSHHHHHHHHTTSCGGGCEEEEEHH--HHH--H--HH------HH----HHHHHHHT----------TCCE
T ss_pred CCeEEEcCCCCHHHHHHHHHHhCCcCcEEEeCHH--HHH--h--hC------HH----HHHHHHhc----------CCCE
Confidence 4677766444555544444444444566666443 110 0 11 23 34444432 1344
Q ss_pred eeEEeee-hhcHH-HHHHHHhC-CCCeEEEecc
Q psy7344 195 NIGCPQM-VAKRG-HYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 195 pvsvK~r-~~~~~-~~~~~l~~-G~~~itih~R 224 (240)
-+-.|+- +.+|. ..++.+.+ |+|.+|+|+=
T Consensus 82 flDlK~~DIpnTv~~a~~~~~~~gaD~vTVh~~ 114 (255)
T 3ldv_A 82 FLDLKFHDIPNTCSKAVKAAAELGVWMVNVHAS 114 (255)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGG
T ss_pred EEEEecccchhHHHHHHHHHHhcCCCEEEEecc
Confidence 4556665 55664 45677888 9999999975
No 356
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=69.42 E-value=28 Score=37.86 Aligned_cols=123 Identities=6% Similarity=-0.081 Sum_probs=67.5
Q ss_pred cccccCCC-ccccccCchhhhhhhhcccceee---eCChhhHHHhhhcccCC---CCceeEEeecCCHHH---HHHHHHH
Q psy7344 66 LFIAEPHC-DGIDINIGCPQMVAKRGHYGAYL---QDDWPLLTELGFKTRSH---MCGHSLMFCGNDSKN---LTEAAKL 135 (240)
Q Consensus 66 ~~~lap~~-~~~dl~~gC~~~i~~~g~~ga~l---~~d~eli~~i~~~~~~~---~~pvivqi~g~d~~~---~~~aa~~ 135 (240)
..+.+||. ..++-.+ ..+++..|+.|..- ..+++.+.+.+.+++.. +.|+.+++.--++.. ..+..+.
T Consensus 584 PIi~a~M~~~vs~~~L--aaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~ 661 (2060)
T 2uva_G 584 PVMVAGMTPTTVPWDF--VAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIPLLGR 661 (2060)
T ss_dssp SEEECCCTTTTCSHHH--HHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHHHHHH
T ss_pred eEEecCCCCccccHHH--HHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhcccCCCeEecccccCcccchhHHHHHHH
Confidence 34557887 3443343 34566667666541 12355555443333322 478999987654442 2344554
Q ss_pred H-ccCCCE--EEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEee-ehhcHHHHHHH
Q psy7344 136 A-EPHCDG--IDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQ-MVAKRGHYGAY 211 (240)
Q Consensus 136 l-e~~~d~--Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~-r~~~~~~~~~~ 211 (240)
+ +.+++. |.+..|-| .++.+.++++. ..+++.... ...+..+.+..
T Consensus 662 ~~~~gv~i~gv~~~~G~p---------------~~e~~~~~l~~---------------~gi~~i~~v~~~~~a~~~v~~ 711 (2060)
T 2uva_G 662 LRADGVPIEGLTIGAGVP---------------SIEVANEYIQT---------------LGIRHISFKPGSVDAIQQVIN 711 (2060)
T ss_dssp HHTTTCCEEEEEEESSCC---------------CHHHHHHHHHH---------------SCCSEEEECCCSHHHHHHHHH
T ss_pred HHHcCCCcceEeecCCCC---------------CHHHHHHHHHH---------------cCCeEEEecCCHHHHHHHHHH
Confidence 4 456665 77766632 34444455543 233444222 25566667677
Q ss_pred HhC-CCCeEE
Q psy7344 212 LQD-DWPLLT 220 (240)
Q Consensus 212 l~~-G~~~it 220 (240)
+++ |+|.|.
T Consensus 712 l~~aG~D~iV 721 (2060)
T 2uva_G 712 IAKANPTFPI 721 (2060)
T ss_dssp HHHHCTTSCE
T ss_pred HHHcCCCEEE
Confidence 788 999998
No 357
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=69.24 E-value=7.3 Score=33.64 Aligned_cols=54 Identities=9% Similarity=-0.143 Sum_probs=36.3
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
..|+++.++. +..+..+.++..++ |+|++.+- .|.-. ..+.+.+.+-.+.+.++
T Consensus 81 rvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~--~P~y~----------~~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 81 RALVVAGIGY-ATSTAIELGNAAKAAGADAVMIH--MPIHP----------YVTAGGVYAYFRDIIEA 135 (316)
T ss_dssp SSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEEC--CCCCS----------CCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEc--CCCCC----------CCCHHHHHHHHHHHHHh
Confidence 4689999864 88888888888876 89999983 34320 12455555555555554
No 358
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=69.23 E-value=3.2 Score=35.15 Aligned_cols=135 Identities=10% Similarity=-0.003 Sum_probs=66.5
Q ss_pred CCcccCCCchhHHHHHHHhhcccCCCceeeccccc--ccCCCccccc--cCchhhhhhhhcccce---ee--eCChhhHH
Q psy7344 34 YGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFI--AEPHCDGIDI--NIGCPQMVAKRGHYGA---YL--QDDWPLLT 104 (240)
Q Consensus 34 ~G~~l~~~~~l~~~iv~ql~~~~~~~p~~vk~~~~--lap~~~~~dl--~~gC~~~i~~~g~~ga---~l--~~d~eli~ 104 (240)
-||+.+++.+| +.++. ..+.|+.+|.-.. +..+...++. ..|+++.+..|.+..+ |- ..|...+.
T Consensus 112 Iga~~~~n~~l----l~~~a--~~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~ 185 (262)
T 1zco_A 112 IGARNSQNFEL----LKEVG--KVENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVP 185 (262)
T ss_dssp ECGGGTTCHHH----HHHHT--TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHH
T ss_pred ECcccccCHHH----HHHHH--hcCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHH
Confidence 56889999998 45565 3678988864322 2222222221 3454444333322112 21 11223333
Q ss_pred HhhhcccCCCCceeEEee--cCCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 105 ELGFKTRSHMCGHSLMFC--GNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 105 ~i~~~~~~~~~pvivqi~--g~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
.+.... ..|+++--. ++..+-...+++. +..|++||+|-...--..+.. -|.+ .-+|+.++++++.++..
T Consensus 186 ~lk~~~---~~pVi~d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~--D~~~-sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 186 VVKELS---HLPIIVDPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALS--DSQQ-QLTFDDFLQLLKELEAL 258 (262)
T ss_dssp HHHHHB---SSCEEECSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSS--CTTT-CBCHHHHHHHHHHHHHT
T ss_pred HHHhhh---CCCEEEEcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCC--hhhc-CCCHHHHHHHHHHHHHH
Confidence 333221 356543321 1222222233333 345899888877721122222 2332 34999999999988764
No 359
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=68.57 E-value=11 Score=33.60 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=49.8
Q ss_pred cCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee
Q psy7344 123 GNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM 201 (240)
Q Consensus 123 g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r 201 (240)
|.+++++.+.++.+ +.|+..+.+..|+ +++.-.+.++++++++ +.++++.+...
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~---------g~~~~l~vDaN 207 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF----------------DDARDVRNALHVRELL---------GAATPLMADAN 207 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS----------------CHHHHHHHHHHHHHHH---------CSSSCEEEECT
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC----------------CHHHHHHHHHHHHHhc---------CCCceEEEeCC
Confidence 44577777766655 5688999888773 4455556777777762 13455665544
Q ss_pred ----hhcHHHHHHHHhC-CCCeEE
Q psy7344 202 ----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 202 ----~~~~~~~~~~l~~-G~~~it 220 (240)
.++..++++.|++ |+++|-
T Consensus 208 ~~~~~~~A~~~~~~L~~~~i~~iE 231 (392)
T 3ddm_A 208 QGWDLPRARQMAQRLGPAQLDWLE 231 (392)
T ss_dssp TCCCHHHHHHHHHHHGGGCCSEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEE
Confidence 3567889999999 999883
No 360
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=68.36 E-value=12 Score=30.95 Aligned_cols=74 Identities=11% Similarity=0.104 Sum_probs=44.8
Q ss_pred HHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee---hhcH
Q psy7344 129 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM---VAKR 205 (240)
Q Consensus 129 ~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r---~~~~ 205 (240)
..++.. ++.|+|.||+-.- .|.....+|+.+.+-++.+++.. .+..++|.+-.- .+..
T Consensus 70 ~~E~~~-i~~GAdEID~Vin----------ig~~~~g~~~~v~~ei~~v~~a~--------~~~~lKvIlEt~~Lt~eei 130 (226)
T 1vcv_A 70 IALVSR-LAEVADEIDVVAP----------IGLVKSRRWAEVRRDLISVVGAA--------GGRVVKVITEEPYLRDEER 130 (226)
T ss_dssp HHHHHH-HTTTCSEEEEECC----------HHHHHTTCHHHHHHHHHHHHHHT--------TTSEEEEECCGGGCCHHHH
T ss_pred HHHHHH-HHCCCCEEEEecc----------hhhhcCCCHHHHHHHHHHHHHHH--------cCCCceEEEeccCCCHHHH
Confidence 455666 8889999995332 11222468888888888777762 111233333222 1334
Q ss_pred HHHHHHHhC-CCCeEEE
Q psy7344 206 GHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 206 ~~~~~~l~~-G~~~iti 221 (240)
...++...+ |+|+|--
T Consensus 131 ~~a~~ia~eaGADfVKT 147 (226)
T 1vcv_A 131 YTLYDIIAEAGAHFIKS 147 (226)
T ss_dssp HHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 567777788 9999854
No 361
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=67.82 E-value=34 Score=28.55 Aligned_cols=89 Identities=11% Similarity=-0.030 Sum_probs=60.7
Q ss_pred Cc-eeEEeecCCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CG-HSLMFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~p-vivqi~g~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.| +.+.|.+.+.++....++. ++.++|.||+=.=+-.. ..+.+.+.+.++.++.. .
T Consensus 19 ~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~-----------~~~~~~v~~~l~~lr~~-----------~ 76 (257)
T 2yr1_A 19 EPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRA-----------IDDQERVLATANGLRNI-----------A 76 (257)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHH-----------S
T ss_pred CcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccc-----------cCcHHHHHHHHHHHHHh-----------c
Confidence 45 6677888888887665555 56689999984442100 13567788888888876 4
Q ss_pred -CeeeEEeee-------h-----hcHHHHHHHHhC-C-CCeEEEeccc
Q psy7344 193 -DINIGCPQM-------V-----AKRGHYGAYLQD-D-WPLLTELGKM 225 (240)
Q Consensus 193 -~~pvsvK~r-------~-----~~~~~~~~~l~~-G-~~~itih~R~ 225 (240)
++|+.+-.| + +...++.+.+.+ | +++|.|--..
T Consensus 77 ~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~ 124 (257)
T 2yr1_A 77 GEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAY 124 (257)
T ss_dssp SSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGG
T ss_pred cCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 678888777 2 124556666667 8 9999986654
No 362
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=67.81 E-value=35 Score=28.04 Aligned_cols=87 Identities=3% Similarity=-0.088 Sum_probs=54.4
Q ss_pred eeEEeec-CCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 117 HSLMFCG-NDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 117 vivqi~g-~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
+.+.|.+ .+.+++...++.+ +.++|.||+=.=+-. -.+++.+.+.++.++... .++
T Consensus 6 Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~------------~~~~~~v~~~~~~lr~~~----------~~~ 63 (238)
T 1sfl_A 6 VVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFE------------NVTVDQVAEMITKLKVMQ----------DSF 63 (238)
T ss_dssp EEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTST------------TCCHHHHHHHHHHHC-------------CCS
T ss_pred EEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecccc------------cCCHHHHHHHHHHHHHhc----------cCC
Confidence 5667778 8888877766655 458999999555210 025788888888888761 267
Q ss_pred eeEEeeeh-----------hcHHHHHHHHhC--CCCeEEEeccc
Q psy7344 195 NIGCPQMV-----------AKRGHYGAYLQD--DWPLLTELGKM 225 (240)
Q Consensus 195 pvsvK~r~-----------~~~~~~~~~l~~--G~~~itih~R~ 225 (240)
|+.+-.|. +...++.+.+.+ ++++|.|--..
T Consensus 64 PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~ 107 (238)
T 1sfl_A 64 KLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQA 107 (238)
T ss_dssp EEEEECCBGGGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCT
T ss_pred CEEEEeeccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccC
Confidence 99888881 123455555554 59999987654
No 363
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=67.77 E-value=8.8 Score=31.09 Aligned_cols=67 Identities=15% Similarity=-0.027 Sum_probs=43.9
Q ss_pred eCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 97 QDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 97 ~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
..||+++..+.. ...|+++- +|=+++...++. .+ ++.|||+|.|= . . ..| .+|++++++++++
T Consensus 133 ~fdW~~l~~~~~----~~~p~~LA-GGL~peNV~~ai-~~--~p~gVDvsSGv--E-~-~pG-----~KD~~ki~~fi~~ 195 (203)
T 1v5x_A 133 AYPRAWAKPLLA----TGRRVILA-GGIAPENLEEVL-AL--RPYALDLASGV--E-E-APG-----VKSAEKLRALFAR 195 (203)
T ss_dssp CCCGGGGHHHHH----TTSCEEEC-SSCCSTTHHHHH-HH--CCSEEEESGGG--E-E-ETT-----EECHHHHHHHHHH
T ss_pred ccCHHHHHhhhc----cCCcEEEE-CCCCHHHHHHHH-hc--CCCEEEeCCce--e-c-CCC-----CcCHHHHHHHHHH
Confidence 458998876311 12575432 333788776766 44 67899999981 1 0 122 3899999999999
Q ss_pred hhhc
Q psy7344 177 PNMV 180 (240)
Q Consensus 177 ~~~~ 180 (240)
++..
T Consensus 196 ~r~~ 199 (203)
T 1v5x_A 196 LASL 199 (203)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8764
No 364
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=67.76 E-value=50 Score=27.10 Aligned_cols=94 Identities=11% Similarity=0.019 Sum_probs=59.0
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
+.++++++... .++-+|++| .+.+..++.+.++.|+|-|-+|.. ...||+.+.++.+..-
T Consensus 63 ~~~~i~~i~~~-----~~~pl~vGG-GIrs~e~~~~~l~~GadkVii~t~--------------a~~~p~li~e~~~~~g 122 (243)
T 4gj1_A 63 QFALIEKLAKE-----VSVNLQVGG-GIRSKEEVKALLDCGVKRVVIGSM--------------AIKDATLCLEILKEFG 122 (243)
T ss_dssp CHHHHHHHHHH-----CCSEEEEES-SCCCHHHHHHHHHTTCSEEEECTT--------------TTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHh-----cCCCeEecc-ccccHHHHHHHHHcCCCEEEEccc--------------cccCCchHHHHHhccc
Confidence 35667766543 223356544 344455667778888888887655 5689999999887653
Q ss_pred hccccccCCCCCCCCeeeEEeee---------h-----hcHHHHHHHHhC-CCCeEEEe
Q psy7344 179 MVHFVIAEPHCDGNDINIGCPQM---------V-----AKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 179 ~~~~~i~~~~~~~~~~pvsvK~r---------~-----~~~~~~~~~l~~-G~~~itih 222 (240)
... .-+-+-+|.. + .+..++++.+++ |+..|.++
T Consensus 123 ~q~----------iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t 171 (243)
T 4gj1_A 123 SEA----------IVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCT 171 (243)
T ss_dssp TTT----------EEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEE
T ss_pred Cce----------EEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEee
Confidence 220 0112222211 1 246889999999 99998886
No 365
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=67.57 E-value=30 Score=30.53 Aligned_cols=81 Identities=15% Similarity=0.058 Sum_probs=53.1
Q ss_pred CceeEEeecCCHHHHHHHHH-HHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~-~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.|+...+...+++++.+.++ .++. |+..+-+..|.+ +++.-.+.++++++++ +.
T Consensus 157 v~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~---------G~ 212 (383)
T 3toy_A 157 IPAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALL---------GP 212 (383)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHH---------CT
T ss_pred eEEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHh---------CC
Confidence 45554444468888776555 4577 888888877732 4445556677777752 13
Q ss_pred CeeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 193 DINIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 193 ~~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
++++.+... .++..++++.|++ |+.+|
T Consensus 213 ~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i 244 (383)
T 3toy_A 213 DIALMLDFNQSLDPAEATRRIARLADYDLTWI 244 (383)
T ss_dssp TSEEEEECTTCSCHHHHHHHHHHHGGGCCSEE
T ss_pred CCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEE
Confidence 455655544 3567889999999 99887
No 366
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=66.92 E-value=23 Score=31.15 Aligned_cols=69 Identities=7% Similarity=-0.041 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++++.+.++.+ +.|++.|.|..|+ .+++...++++++++++ +.++++.+...
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~---------G~~~~l~vDan~~ 200 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCV---------PAGSKVMIDPNEA 200 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTS---------CTTCEEEEECTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhh---------CCCCeEEEECCCC
Confidence 788877766654 6699999998874 24556667888888862 13567766554
Q ss_pred --hhcHHHHHHHHhC-CCC
Q psy7344 202 --VAKRGHYGAYLQD-DWP 217 (240)
Q Consensus 202 --~~~~~~~~~~l~~-G~~ 217 (240)
.++..++++.|++ |.+
T Consensus 201 ~~~~~a~~~~~~l~~~g~~ 219 (389)
T 2oz8_A 201 WTSKEALTKLVAIREAGHD 219 (389)
T ss_dssp BCHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhcCCC
Confidence 3567889999877 544
No 367
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=66.74 E-value=23 Score=31.38 Aligned_cols=81 Identities=15% Similarity=0.043 Sum_probs=52.7
Q ss_pred CceeEEeec---CCHHHHHHHHH-HHcc---CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCC
Q psy7344 115 CGHSLMFCG---NDSKNLTEAAK-LAEP---HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEP 187 (240)
Q Consensus 115 ~pvivqi~g---~d~~~~~~aa~-~le~---~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~ 187 (240)
.|+...+.+ .+++++.+.++ .++. |+..+-+..|.+ +++.-.+.++++++++
T Consensus 158 v~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~------ 216 (390)
T 3ugv_A 158 VKAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAV------ 216 (390)
T ss_dssp EEEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHH------
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHh------
Confidence 455544444 57777776554 4577 888888877632 4445456677777752
Q ss_pred CCCCCCeeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 188 HCDGNDINIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 188 ~~~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
+.++++.+... .++..++++.|++ |+.+|
T Consensus 217 ---G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i 250 (390)
T 3ugv_A 217 ---GRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWI 250 (390)
T ss_dssp ---CTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEE
T ss_pred ---CCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEE
Confidence 13456665544 3567889999999 99888
No 368
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=66.31 E-value=7.8 Score=33.01 Aligned_cols=27 Identities=15% Similarity=-0.228 Sum_probs=22.0
Q ss_pred CCceeEEeecC-CHHHHHHHHHHHcc-CC
Q psy7344 114 MCGHSLMFCGN-DSKNLTEAAKLAEP-HC 140 (240)
Q Consensus 114 ~~pvivqi~g~-d~~~~~~aa~~le~-~~ 140 (240)
..|++++-+.. +++++..+++.+.. |.
T Consensus 145 ~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn 173 (276)
T 1vs1_A 145 GKPVLLKRGFGNTVEELLAAAEYILLEGN 173 (276)
T ss_dssp TCCEEEECCTTCCHHHHHHHHHHHHHTTC
T ss_pred CCeEEEcCCCCCCHHHHHHHHHHHHHcCC
Confidence 57999998775 89999999998865 44
No 369
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=65.89 E-value=16 Score=32.06 Aligned_cols=81 Identities=17% Similarity=0.117 Sum_probs=51.2
Q ss_pred CceeEEeecCCHHHHHHHHH-HHcc-CCCEEEecCCCchhhhhcccccccccCCHH-HHHHHHHHhhhccccccCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWP-LLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~-~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~-~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
.|+...+...+++++.+.++ .+++ |+..+-+..|. +++ .-.+.++++++++ |
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~----------------~~~~~d~~~v~avR~a~---------g 183 (367)
T 3dg3_A 129 MRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGR----------------RPVQLDTAVVRALRERF---------G 183 (367)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCC----------------SSTHHHHHHHHHHHHHH---------G
T ss_pred EEEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCC----------------ChhhhHHHHHHHHHHHh---------C
Confidence 46666666678888776555 4577 88888887773 111 1224555666542 1
Q ss_pred CCeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 192 NDINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 192 ~~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
.++++.+... .++..++++.|++ |+++|-
T Consensus 184 ~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 217 (367)
T 3dg3_A 184 DAIELYVDGNRGWSAAESLRAMREMADLDLLFAE 217 (367)
T ss_dssp GGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 2345555444 3567889999999 998874
No 370
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=65.46 E-value=20 Score=30.99 Aligned_cols=74 Identities=9% Similarity=-0.052 Sum_probs=47.5
Q ss_pred HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEE-ee----e-----
Q psy7344 132 AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGC-PQ----M----- 201 (240)
Q Consensus 132 aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsv-K~----r----- 201 (240)
+.+++++|+|.||||..- .+. |+ ....++...++++.+++. .++|+++ -. .
T Consensus 80 A~~~v~~GAdiIDIg~~S-----trP--~~-~~vs~eee~~vV~~v~~~-----------~~vplsI~DT~~~~~~~~V~ 140 (310)
T 2h9a_B 80 AKKCVEYGADIVALRLVS-----AHP--DG-QNRSGAELAEVCKAVADA-----------IDVPLMIIGCGVEEKDAEIF 140 (310)
T ss_dssp HHHHHHTTCSEEEEECGG-----GCT--TT-TCCCHHHHHHHHHHHHHH-----------CSSCEEEECCSCHHHHHHHH
T ss_pred HHHHHHcCCcEEEEeCcc-----CCC--CC-CCCCHHHHHHHHHHHHHh-----------CCceEEEECCCCCCCCHHHH
Confidence 345567799999999861 111 11 235677777788888877 6788888 54 1
Q ss_pred -------------h-----hcHHHHHHHHhC-CCCeEEEecc
Q psy7344 202 -------------V-----AKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 202 -------------~-----~~~~~~~~~l~~-G~~~itih~R 224 (240)
+ ....+++..+.+ |+..+.+|.|
T Consensus 141 eaal~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~ 182 (310)
T 2h9a_B 141 PVIGEALSGRNCLLSSATKDNYKPIVATCMVHGHSVVASAPL 182 (310)
T ss_dssp HHHHHHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECSS
T ss_pred HHHHHhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEEChh
Confidence 0 123456666666 7777777754
No 371
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=64.94 E-value=19 Score=30.64 Aligned_cols=35 Identities=6% Similarity=-0.191 Sum_probs=25.4
Q ss_pred CCceeEEeecC-CHHHHHHHHHHHcc-CC-CEEEecCC
Q psy7344 114 MCGHSLMFCGN-DSKNLTEAAKLAEP-HC-DGIDINIG 148 (240)
Q Consensus 114 ~~pvivqi~g~-d~~~~~~aa~~le~-~~-d~Idin~g 148 (240)
..|++++-+.. +++++..+++.+.. |. +.+=+-||
T Consensus 129 ~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg 166 (280)
T 2qkf_A 129 GNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERG 166 (280)
T ss_dssp CCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECC
T ss_pred CCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 57999997654 89999999998865 43 44444455
No 372
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=64.77 E-value=45 Score=28.03 Aligned_cols=74 Identities=3% Similarity=-0.019 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC-eeeEEeee
Q psy7344 124 NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND-INIGCPQM 201 (240)
Q Consensus 124 ~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~-~pvsvK~r 201 (240)
.|++.+.+.++.+.+ |+|.|.|.- . .|. ..|+.+.++++++++. .+ +|+.+-.-
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~D-------t---~G~---~~P~~~~~lv~~l~~~-----------~~~~~l~~H~H 207 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGD-------T---IGR---GTPDTVAAMLDAVLAI-----------APAHSLAGHYH 207 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEE-------T---TSC---CCHHHHHHHHHHHHTT-----------SCGGGEEEEEB
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecC-------C---CCC---cCHHHHHHHHHHHHHh-----------CCCCeEEEEEC
Confidence 388888998888765 888887741 1 122 5899999999999987 43 67777652
Q ss_pred --hhcHHHHHHHHhC-CCCeEEE
Q psy7344 202 --VAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 202 --~~~~~~~~~~l~~-G~~~iti 221 (240)
......-.....+ |++.|..
T Consensus 208 n~~Gla~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 208 DTGGRALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp CTTSCHHHHHHHHHHHTCCEEEE
T ss_pred CCcchHHHHHHHHHHhCCCEEEe
Confidence 2222222233345 9987665
No 373
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=64.45 E-value=15 Score=31.16 Aligned_cols=52 Identities=10% Similarity=-0.005 Sum_probs=35.9
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhccccccccc-CCHHHHHHHHHHhhhc
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQ-DDWPLLTNLVYSPNMV 180 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~-~~p~~i~~iv~~~~~~ 180 (240)
+++.+++++..+..+.++..++ |+|++.+- .|.-. . .+.+.+.+-.+.+.++
T Consensus 67 vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~--~P~y~----------~~~s~~~l~~~f~~va~a 120 (286)
T 2r91_A 67 VIVQVASLNADEAIALAKYAESRGAEAVASL--PPYYF----------PRLSERQIAKYFRDLCSA 120 (286)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEEC--CSCSS----------TTCCHHHHHHHHHHHHHH
T ss_pred EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEc--CCcCC----------CCCCHHHHHHHHHHHHHh
Confidence 8888888899999999998876 89999984 24321 1 2455555555555554
No 374
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=64.23 E-value=41 Score=29.57 Aligned_cols=78 Identities=12% Similarity=0.065 Sum_probs=47.9
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+..- +-+.++..+.++.+++ +.+.||= |.. ..|++..+++.+.
T Consensus 194 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq----P~~-----------~~d~~~~~~l~~~--------------- 243 (391)
T 2qgy_A 194 ELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEE----PVD-----------GENISLLTEIKNT--------------- 243 (391)
T ss_dssp SSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEEC----SSC-----------TTCHHHHHHHHHH---------------
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeC----CCC-----------hhhHHHHHHHHhh---------------
Confidence 456666552 2377777777888776 5676663 211 1467777666654
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+++||..-.++.+..++.+.+++ .+|.|.+
T Consensus 244 ~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 274 (391)
T 2qgy_A 244 FNMKVVTGEKQSGLVHFRELISRNAADIFNP 274 (391)
T ss_dssp CSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 45577666665555666666666 6677665
No 375
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=64.15 E-value=31 Score=30.14 Aligned_cols=24 Identities=13% Similarity=-0.094 Sum_probs=13.3
Q ss_pred CceeEEee-cCCHHHHHHHHHHHcc
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLAEP 138 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~le~ 138 (240)
.++.+..- +-+.++..+.++.+++
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~ 214 (379)
T 2rdx_A 190 EKAMADANQGWRVDNAIRLARATRD 214 (379)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHTTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHh
Confidence 45555442 2366666666666665
No 376
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=64.06 E-value=23 Score=31.78 Aligned_cols=97 Identities=14% Similarity=0.096 Sum_probs=55.4
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcc----cc--cc---cccC----C----HHHHHHHHHH
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRG----HY--GA---YLQD----D----WPLLTNLVYS 176 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~----g~--G~---~l~~----~----p~~i~~iv~~ 176 (240)
.|+...+.+.+++++.+.++.+ ++|+..+-+-.|.|......+ +. .. .... + .+...+++++
T Consensus 140 v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~a 219 (425)
T 3vcn_A 140 VTVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFER 219 (425)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHH
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHH
Confidence 4665556667899888766654 678999888777432100000 00 00 0000 0 1223455666
Q ss_pred hhhccccccCCCCCCCCeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 177 PNMVHFVIAEPHCDGNDINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 177 ~~~~~~~i~~~~~~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+++++ +.++++.+... .++.+++++.|++ |+++|-
T Consensus 220 vR~a~---------G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 259 (425)
T 3vcn_A 220 AREVL---------GWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE 259 (425)
T ss_dssp HHHHH---------CSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE
T ss_pred HHHHc---------CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 66652 13556666544 4567899999999 999883
No 377
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=63.68 E-value=54 Score=28.51 Aligned_cols=78 Identities=14% Similarity=0.056 Sum_probs=47.2
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+..- +-+.++..+.++.+++ +.+.||= |.. ..|++..+++.+.
T Consensus 200 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~----P~~-----------~~~~~~~~~l~~~--------------- 249 (382)
T 1rvk_A 200 DIRLMIDAFHWYSRTDALALGRGLEKLGFDWIEE----PMD-----------EQSLSSYKWLSDN--------------- 249 (382)
T ss_dssp TSEEEEECCTTCCHHHHHHHHHHHHTTTCSEEEC----CSC-----------TTCHHHHHHHHHH---------------
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC----CCC-----------hhhHHHHHHHHhh---------------
Confidence 345555542 2367777777777766 5666653 111 1467777666654
Q ss_pred CCeeeEEeeehhc-HHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAK-RGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~-~~~~~~~l~~-G~~~iti 221 (240)
+++||..-.++.+ ..++.+.++. .+|.|.+
T Consensus 250 ~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~i 281 (382)
T 1rvk_A 250 LDIPVVGPESAAGKHWHRAEWIKAGACDILRT 281 (382)
T ss_dssp CSSCEEECSSCSSHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEeCCccCcHHHHHHHHHcCCCCEEee
Confidence 4557776666555 6666666666 6677666
No 378
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=62.52 E-value=17 Score=31.29 Aligned_cols=69 Identities=14% Similarity=0.022 Sum_probs=45.6
Q ss_pred HHHHHHHHHccCCCEEE--ecCCCchhhhhccccccccc---CCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh
Q psy7344 128 NLTEAAKLAEPHCDGID--INIGCPQMVAKRGHYGAYLQ---DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV 202 (240)
Q Consensus 128 ~~~~aa~~le~~~d~Id--in~gCP~~~~~~~g~G~~l~---~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~ 202 (240)
...++...+++|+|.|| ||.| ..+- .+|+.+.+-+++++++. . +..+|.-+
T Consensus 102 K~~Ea~~Av~~GAdEIDmVinig------------~lk~~~~g~~~~V~~eI~~v~~a~-----------~-~~~lKVIl 157 (297)
T 4eiv_A 102 VSLEAVGALKDGADEIECLIDWR------------RMNENVADGESRIRLLVSEVKKVV-----------G-PKTLKVVL 157 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTH------------HHHHCHHHHHHHHHHHHHHHHHHH-----------T-TSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEeeeeHH------------HHhcccCCcHHHHHHHHHHHHHHh-----------c-CCceEEEE
Confidence 34566677788999999 5555 1112 48899988888888872 1 34555552
Q ss_pred -----h--c-HHHHHHHHhC-CCCeEE
Q psy7344 203 -----A--K-RGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 203 -----~--~-~~~~~~~l~~-G~~~it 220 (240)
. . ....++...+ |+|+|-
T Consensus 158 Et~~Lt~~e~i~~A~~ia~~AGADFVK 184 (297)
T 4eiv_A 158 SGGELQGGDIISRAAVAALEGGADFLQ 184 (297)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred ecccCCcHHHHHHHHHHHHHhCCCEEE
Confidence 2 2 3456777778 999984
No 379
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=62.45 E-value=28 Score=30.31 Aligned_cols=48 Identities=15% Similarity=-0.051 Sum_probs=26.9
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
+.++.+..- +-+.++..+.++.+++ +.+.||=-+. ..|++..+++.+.
T Consensus 191 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~---------------~~d~~~~~~l~~~ 240 (371)
T 2ovl_A 191 SFPLMVDANMKWTVDGAIRAARALAPFDLHWIEEPTI---------------PDDLVGNARIVRE 240 (371)
T ss_dssp TSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSC---------------TTCHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCC---------------cccHHHHHHHHhh
Confidence 345555542 2366677777777765 5666652111 1467777776654
No 380
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=62.44 E-value=31 Score=30.21 Aligned_cols=71 Identities=13% Similarity=0.098 Sum_probs=48.6
Q ss_pred CHHHHHHHHH-HHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-
Q psy7344 125 DSKNLTEAAK-LAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM- 201 (240)
Q Consensus 125 d~~~~~~aa~-~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r- 201 (240)
+++++.+.++ .++. |+..+-+..|++ +++.-.+.++++++++ +.++++.+...
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~---------g~~~~l~vDan~ 206 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERV---------DSAVRIAIDGNG 206 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHS---------CTTCEEEEECTT
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHc---------CCCCcEEeeCCC
Confidence 7777766544 5677 899999888753 3444456777777762 13556666555
Q ss_pred ---hhcHHHHHHHHhC-CCCeE
Q psy7344 202 ---VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 ---~~~~~~~~~~l~~-G~~~i 219 (240)
.++..++++.|++ |+++|
T Consensus 207 ~~~~~~a~~~~~~l~~~~i~~i 228 (372)
T 3tj4_A 207 KWDLPTCQRFCAAAKDLDIYWF 228 (372)
T ss_dssp CCCHHHHHHHHHHTTTSCEEEE
T ss_pred CCCHHHHHHHHHHHhhcCCCEE
Confidence 3466788999998 98877
No 381
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=62.34 E-value=46 Score=27.61 Aligned_cols=72 Identities=8% Similarity=-0.115 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcH
Q psy7344 127 KNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKR 205 (240)
Q Consensus 127 ~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~ 205 (240)
.+..+.++..++ |+++|-+.- ..+ ++...++.+..+.+ . +++||..|.-+.+.
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt-------~~~----~f~G~~~~l~~i~~----~-----------v~lPvl~kdfI~d~ 118 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLT-------EPH----RFGGSLLDLKRVRE----A-----------VDLPLLRKDFVVDP 118 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEC-------CCS----SSCCCHHHHHHHHH----H-----------CCSCEEEESCCCSH
T ss_pred CCHHHHHHHHHHcCCCEEEEec-------chh----hhccCHHHHHHHHH----h-----------cCCCEEECCcCCCH
Confidence 456677777766 788886621 111 12346676666655 3 67899988876666
Q ss_pred HHHHHHHhCCCCeEEEecc
Q psy7344 206 GHYGAYLQDDWPLLTELGK 224 (240)
Q Consensus 206 ~~~~~~l~~G~~~itih~R 224 (240)
.++...+..|||+|.+-..
T Consensus 119 ~qi~~a~~~GAD~VlL~~~ 137 (254)
T 1vc4_A 119 FMLEEARAFGASAALLIVA 137 (254)
T ss_dssp HHHHHHHHTTCSEEEEEHH
T ss_pred HHHHHHHHcCCCEEEECcc
Confidence 6665544449999998554
No 382
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=62.25 E-value=41 Score=29.90 Aligned_cols=96 Identities=8% Similarity=-0.192 Sum_probs=53.6
Q ss_pred CCceeEEeec-CCHHHHHHHHHHHcc-CC-CEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 114 MCGHSLMFCG-NDSKNLTEAAKLAEP-HC-DGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 114 ~~pvivqi~g-~d~~~~~~aa~~le~-~~-d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
..|++++-+. .+++++..+++.+.. |. +.+-+.||--. -..+.. --.|...+..+. +.
T Consensus 249 gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~----yp~~~~-~~ldl~~i~~lk----~~---------- 309 (385)
T 3nvt_A 249 DKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRT----YEKATR-NTLDISAVPILK----KE---------- 309 (385)
T ss_dssp SSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCC----SCCSSS-SBCCTTHHHHHH----HH----------
T ss_pred CCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCC----CCCCCc-cccCHHHHHHHH----Hh----------
Confidence 5799999876 799999999999865 54 34444444110 000000 112555444433 33
Q ss_pred CCCeeeEEeeeh-----hcHHHHHHHHhC-CCCeEEE--eccccccc
Q psy7344 191 GNDINIGCPQMV-----AKRGHYGAYLQD-DWPLLTE--LGKMAMLV 229 (240)
Q Consensus 191 ~~~~pvsvK~r~-----~~~~~~~~~l~~-G~~~iti--h~R~~~~~ 229 (240)
...||.+-... +-...++.+... ||+++.| |.---...
T Consensus 310 -~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~ 355 (385)
T 3nvt_A 310 -THLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVAL 355 (385)
T ss_dssp -BSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCS
T ss_pred -cCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCChhhcC
Confidence 45677443221 122356777888 9995555 65544433
No 383
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=61.97 E-value=36 Score=28.39 Aligned_cols=91 Identities=10% Similarity=0.099 Sum_probs=49.3
Q ss_pred CceeEEeecCC------HHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCC
Q psy7344 115 CGHSLMFCGND------SKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPH 188 (240)
Q Consensus 115 ~pvivqi~g~d------~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~ 188 (240)
.|++|-|--.. .+...++++.+.+.+..+-+|.. .- ..+|. .=++.++++++.++..
T Consensus 14 ~~LcVgLD~~~~~~~~~~~~~~~lv~~l~~~v~~~Kvg~~--lf----~~~G~---~g~~~l~~l~~~~~~g-------- 76 (255)
T 3qw3_A 14 SLLCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKPNAA--FF----EFFGA---EGWAALSEVIRAVPAG-------- 76 (255)
T ss_dssp CCEEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEEBHH--HH----HTTTH---HHHHHHHHHHHHSCTT--------
T ss_pred CCEEEEeCCCchhcchHHHHHHHHHHHhCCcCcEEEEcHH--HH----HhcCH---HHHHHHHHHHHHhcCC--------
Confidence 56777653221 12344455555555667766554 11 11221 1134666666655433
Q ss_pred CCCCCeeeEEeee-hhcHH-HHHHHHh-C-CCCeEEEeccc
Q psy7344 189 CDGNDINIGCPQM-VAKRG-HYGAYLQ-D-DWPLLTELGKM 225 (240)
Q Consensus 189 ~~~~~~pvsvK~r-~~~~~-~~~~~l~-~-G~~~itih~R~ 225 (240)
..+=+-.|.- +.+|. .+++.+. . |+|.+|+|+=.
T Consensus 77 ---~~VflDlK~~DI~nTv~~~a~~~~~~lg~d~vTvh~~~ 114 (255)
T 3qw3_A 77 ---IPVVLDAKRGDIADTADAYATSAFKHLNAHAITASPYM 114 (255)
T ss_dssp ---CCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECCTT
T ss_pred ---CeEEEEeecCCcHHHHHHHHHHHHHHcCCCEEEEcccC
Confidence 3333446655 55554 6777774 7 99999999743
No 384
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=61.86 E-value=52 Score=27.57 Aligned_cols=86 Identities=8% Similarity=-0.042 Sum_probs=50.0
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
.++++-+--.|.++..++++.+...++.+.+|.-- - . ..-++.++++.+..+.. +.
T Consensus 32 ~~LiVALD~~~~~~al~l~~~l~~~v~~~KvG~~l--~--~--------~~G~~~v~~L~~~a~~~------------g~ 87 (260)
T 3eww_A 32 TNLCLSADVSLARELLQLADALGPSICMLKTHVDI--L--N--------DFTLDVMKELITLAKCH------------EF 87 (260)
T ss_dssp CCEEEECCCSCHHHHHHHHHHHGGGCSEEEECGGG--C--T--------TCCHHHHHHHHHHHHHH------------TC
T ss_pred CCEEEEeCCCCHHHHHHHHHHhCCCceEEEEcHHH--H--H--------HhCHHHHHHHHHHHhhc------------CC
Confidence 56777765557777777777776667788776541 1 0 12355666665533221 33
Q ss_pred eeEE--eee-hhcHHHHH-H-HH-h-C-CCCeEEEecc
Q psy7344 195 NIGC--PQM-VAKRGHYG-A-YL-Q-D-DWPLLTELGK 224 (240)
Q Consensus 195 pvsv--K~r-~~~~~~~~-~-~l-~-~-G~~~itih~R 224 (240)
+|+. |+- +.+|...+ + .+ . . |+|.+|+|+=
T Consensus 88 ~VflDlK~~DIpnTv~~a~~~a~~~~~~~ad~vTVha~ 125 (260)
T 3eww_A 88 LIFENRKFADIGNTVKKQYEGGIFKIASWADLVNAHVV 125 (260)
T ss_dssp EEEEEEEECSCHHHHHHHHHCTTTCGGGTCSEEEEEST
T ss_pred eEEEEeeccccHHHHHHHHHHHHHhhhccCCEEEEeCC
Confidence 5554 444 55665432 1 22 1 3 8999999984
No 385
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=61.31 E-value=41 Score=26.90 Aligned_cols=38 Identities=11% Similarity=0.138 Sum_probs=31.7
Q ss_pred CceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchh
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQM 152 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~ 152 (240)
.|++..+.+.+++++.+.++.+.+ |++.|+++.-+|..
T Consensus 13 ~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~ 51 (207)
T 2yw3_A 13 SRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKG 51 (207)
T ss_dssp HCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHH
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHH
Confidence 578888888899988888887755 79999999888864
No 386
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=60.55 E-value=10 Score=31.46 Aligned_cols=61 Identities=15% Similarity=0.015 Sum_probs=36.8
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
+.++++++...+. +.|+++-.+-.++++ +.+++ .|+|+|=+| +++..+|+.+.+++++++
T Consensus 167 ~~~~i~~i~~~~~--~~Pv~vGGGI~t~e~---a~~~~-~gAD~VVVG--------------Sa~v~~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 167 DIEAVKKTKAVLE--TSTLFYGGGIKDAET---AKQYA-EHADVIVVG--------------NAVYEDFDRALKTVAAVK 226 (228)
T ss_dssp CHHHHHHHHHHCS--SSEEEEESSCCSHHH---HHHHH-TTCSEEEEC--------------THHHHCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcC--CCCEEEeCCCCCHHH---HHHHH-hCCCEEEEC--------------hHHhcCHHHHHHHHHHHh
Confidence 4566666554321 356554322235554 44455 488888663 446679999999998875
Q ss_pred h
Q psy7344 179 M 179 (240)
Q Consensus 179 ~ 179 (240)
+
T Consensus 227 ~ 227 (228)
T 3vzx_A 227 G 227 (228)
T ss_dssp C
T ss_pred c
Confidence 3
No 387
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=60.40 E-value=57 Score=27.58 Aligned_cols=75 Identities=9% Similarity=0.034 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEee--
Q psy7344 124 NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQ-- 200 (240)
Q Consensus 124 ~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~-- 200 (240)
.|++.+.+.++.+.+ |+|.|-|. ... |. ..|+.+.++++.+++.+ .++|+.+-.
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~-------DT~---G~---~~P~~~~~lv~~l~~~~----------~~~~l~~H~Hn 212 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLG-------DTI---GV---GTAGATRRLIEAVASEV----------PRERLAGHFHD 212 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE-------ESS---SC---CCHHHHHHHHHHHTTTS----------CGGGEEEEEBC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe-------CCC---CC---cCHHHHHHHHHHHHHhC----------CCCeEEEEeCC
Confidence 378888888887755 88887773 111 22 58999999999999872 156777765
Q ss_pred ehhcHHH-HHHHHhCCCCeEEE
Q psy7344 201 MVAKRGH-YGAYLQDDWPLLTE 221 (240)
Q Consensus 201 r~~~~~~-~~~~l~~G~~~iti 221 (240)
....... ...+++.|++.|..
T Consensus 213 ~~Gla~An~laAv~aGa~~vd~ 234 (302)
T 2ftp_A 213 TYGQALANIYASLLEGIAVFDS 234 (302)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEE
T ss_pred CccHHHHHHHHHHHhCCCEEEe
Confidence 2333333 33344449987654
No 388
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=60.38 E-value=30 Score=29.92 Aligned_cols=77 Identities=10% Similarity=0.025 Sum_probs=44.5
Q ss_pred CceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.++.+..- +-+.++..+.++.+++ +.+.||= |.. ..|++..+++.+. +
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~----P~~-----------~~~~~~~~~l~~~---------------~ 239 (359)
T 1mdl_A 190 FGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEE----PTL-----------QHDYEGHQRIQSK---------------L 239 (359)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHHHHTCSCEEC----CSC-----------TTCHHHHHHHHHT---------------C
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEC----CCC-----------hhhHHHHHHHHHh---------------C
Confidence 44544432 2256666666666654 4555542 110 1467776666543 4
Q ss_pred CeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 193 DINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 193 ~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
++||..-.++.+..++.+.++. .+|.|.+
T Consensus 240 ~iPI~~de~~~~~~~~~~~i~~~~~d~v~i 269 (359)
T 1mdl_A 240 NVPVQMGENWLGPEEMFKALSIGACRLAMP 269 (359)
T ss_dssp SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCEEeCCCCCCHHHHHHHHHcCCCCEEee
Confidence 5677776666666677777777 7777766
No 389
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=60.28 E-value=43 Score=27.35 Aligned_cols=34 Identities=9% Similarity=-0.036 Sum_probs=29.3
Q ss_pred CceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIG 148 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~g 148 (240)
.|++..+++.++++....++.+.+ |++.|++.+-
T Consensus 13 ~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~ 47 (217)
T 3lab_A 13 KPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLR 47 (217)
T ss_dssp CSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETT
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 588889999999999999998866 7899998554
No 390
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=59.56 E-value=24 Score=29.89 Aligned_cols=23 Identities=13% Similarity=-0.190 Sum_probs=18.8
Q ss_pred hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 203 AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 203 ~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+..++-++++++ ||+.|.+.+-.
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp 184 (264)
T 1m3u_A 161 DQLLSDALALEAAGAQLLVLECVP 184 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCC
T ss_pred HHHHHHHHHHHHCCCcEEEEecCC
Confidence 456778888999 99999998854
No 391
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=59.43 E-value=66 Score=28.90 Aligned_cols=97 Identities=14% Similarity=0.082 Sum_probs=57.3
Q ss_pred CceeEEeecCCHHHHHHHHHHH-ccCCCEEEecCCCchhh------------hhccc-----------ccccc--cCCHH
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLA-EPHCDGIDINIGCPQMV------------AKRGH-----------YGAYL--QDDWP 168 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~l-e~~~d~Idin~gCP~~~------------~~~~g-----------~G~~l--~~~p~ 168 (240)
.|+...+.+.+++++.+.++.+ ++|+..+-+-.|-.... ....+ -|..+ ..+.+
T Consensus 145 v~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (440)
T 3t6c_A 145 IALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAK 224 (440)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHH
Confidence 4555455567888888766654 67899988877622100 00000 00000 00134
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 169 LLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 169 ~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
...+.++++++++ +.++++.+... .++.+++++.|++ |+.+|-
T Consensus 225 ~d~~~v~avR~a~---------G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 272 (440)
T 3t6c_A 225 SIPRLFDHLRNKL---------GFSVELLHDAHERITPINAIHMAKALEPYQLFFLE 272 (440)
T ss_dssp HHHHHHHHHHHHH---------CSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE
T ss_pred HHHHHHHHHHHhc---------CCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE
Confidence 5556778888763 13567776665 3567889999999 999883
No 392
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=58.79 E-value=12 Score=30.39 Aligned_cols=32 Identities=9% Similarity=-0.103 Sum_probs=24.4
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEEecc
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R 224 (240)
+++|+.++..+.+..+ ++.+.+ |||.|++|.-
T Consensus 74 ~~ipv~v~ggI~~~~~-~~~~l~~Gad~V~lg~~ 106 (244)
T 1vzw_A 74 MDIKVELSGGIRDDDT-LAAALATGCTRVNLGTA 106 (244)
T ss_dssp CSSEEEEESSCCSHHH-HHHHHHTTCSEEEECHH
T ss_pred cCCcEEEECCcCCHHH-HHHHHHcCCCEEEECch
Confidence 6789999988777666 555555 9999999753
No 393
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=58.65 E-value=21 Score=32.09 Aligned_cols=35 Identities=14% Similarity=-0.157 Sum_probs=25.1
Q ss_pred CCceeEEeec-----CCHHHHHHHHHHHcc-CCCEEEecCC
Q psy7344 114 MCGHSLMFCG-----NDSKNLTEAAKLAEP-HCDGIDINIG 148 (240)
Q Consensus 114 ~~pvivqi~g-----~d~~~~~~aa~~le~-~~d~Idin~g 148 (240)
..|+++++.- .+-.++.+++..++. ++++|-+||+
T Consensus 178 ~lPv~iS~T~~~~G~l~G~~~~~~~~~l~~~~~~avGvNC~ 218 (406)
T 1lt8_A 178 GKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIGVNCH 218 (406)
T ss_dssp TSCEEEEECCBTTBCTTCCCHHHHHHHHHTTTCSEEEEESS
T ss_pred CCcEEEEEEECCCCCcCCCcHHHHHHHhhcCCCCEEEecCC
Confidence 5798888742 234456677777755 7899999997
No 394
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=58.39 E-value=31 Score=30.26 Aligned_cols=78 Identities=10% Similarity=0.043 Sum_probs=45.3
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+..- +-+.++..+.++.+++ +.+.|+= |.. ..|++..+++.+.
T Consensus 208 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq----P~~-----------~~d~~~~~~l~~~--------------- 257 (388)
T 2nql_A 208 QAKIAADMHWNQTPERALELIAEMQPFDPWFAEA----PVW-----------TEDIAGLEKVSKN--------------- 257 (388)
T ss_dssp TSEEEEECCSCSCHHHHHHHHHHHGGGCCSCEEC----CSC-----------TTCHHHHHHHHTS---------------
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEEC----CCC-----------hhhHHHHHHHHhh---------------
Confidence 345555542 2367777777777765 5666652 111 1466666665542
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+++||..-.++.+..++.+.+++ .+|.|.+
T Consensus 258 ~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 288 (388)
T 2nql_A 258 TDVPIAVGEEWRTHWDMRARIERCRIAIVQP 288 (388)
T ss_dssp CCSCEEECTTCCSHHHHHHHHTTSCCSEECC
T ss_pred CCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe
Confidence 45677766665556666666666 6676655
No 395
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=58.34 E-value=20 Score=33.65 Aligned_cols=51 Identities=8% Similarity=-0.126 Sum_probs=36.4
Q ss_pred CCceeEEeec------CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhc
Q psy7344 114 MCGHSLMFCG------NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV 180 (240)
Q Consensus 114 ~~pvivqi~g------~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~ 180 (240)
+.|+++++.- .+.+++.+++..++. ++++|-+||++ .|+.+..+++.+...
T Consensus 167 ~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l~~~~~~avG~NC~~----------------gp~~~~~~l~~l~~~ 224 (566)
T 1q7z_A 167 DVFLIAHMTFDEKGRSLTGTDPANFAITFDELDIDALGINCSL----------------GPEEILPIFQELSQY 224 (566)
T ss_dssp SSCEEEEECCCTTSCCTTSCCHHHHHHHHHTSSCSEEEEESSS----------------CHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEEcCCCeeCCCCcHHHHHHHhhccCCCEEEEeCCC----------------CHHHHHHHHHHHHhc
Confidence 5799888742 245567777777765 79999999983 566666777776653
No 396
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=58.30 E-value=18 Score=31.04 Aligned_cols=79 Identities=11% Similarity=-0.172 Sum_probs=53.3
Q ss_pred HHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--h---hcHH
Q psy7344 133 AKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM--V---AKRG 206 (240)
Q Consensus 133 a~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r--~---~~~~ 206 (240)
|+++++ |+++|-++-..-.. . .|+-...+-..+.+-..++.+..+ +++||++-+. + .+..
T Consensus 28 A~~~~~aG~~ai~vs~~~~a~--~-~G~pD~~~vt~~em~~~~~~I~~~-----------~~~PviaD~d~Gyg~~~~~~ 93 (290)
T 2hjp_A 28 AKLAEQAGFGGIWGSGFELSA--S-YAVPDANILSMSTHLEMMRAIAST-----------VSIPLIADIDTGFGNAVNVH 93 (290)
T ss_dssp HHHHHHHTCSEEEECHHHHHH--H-TTSCTTTCSCHHHHHHHHHHHHTT-----------CSSCEEEECTTTTSSHHHHH
T ss_pred HHHHHHcCCCEEEEChHHHHH--h-CCCCCCCCCCHHHHHHHHHHHHhc-----------CCCCEEEECCCCCCCHHHHH
Confidence 455554 78988876321111 1 334343456777777777777776 7889998887 3 3456
Q ss_pred HHHHHHhC-CCCeEEEeccc
Q psy7344 207 HYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 207 ~~~~~l~~-G~~~itih~R~ 225 (240)
+.++.+++ |+++|.|-+-+
T Consensus 94 ~~v~~l~~aGa~gv~iED~~ 113 (290)
T 2hjp_A 94 YVVPQYEAAGASAIVMEDKT 113 (290)
T ss_dssp HHHHHHHHHTCSEEEEECBC
T ss_pred HHHHHHHHhCCeEEEEcCCC
Confidence 77888899 99999997765
No 397
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=58.30 E-value=15 Score=38.63 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh-hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 165 DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV-AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 165 ~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~-~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.+|+.+.++++.+++.. ...||.+|+-. ....+.++.+++ |+|+|++-|..
T Consensus 1010 ~s~edl~~~I~~Lk~~~----------~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~e 1062 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQIN----------PEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHD 1062 (1520)
T ss_dssp SSHHHHHHHHHHHHHHC----------TTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTT
T ss_pred CCHHHHHHHHHHHHHhC----------CCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCC
Confidence 56788889999999871 27899999984 345567788888 99999996554
No 398
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=58.27 E-value=30 Score=29.15 Aligned_cols=74 Identities=11% Similarity=-0.095 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
|.+.+.+.++.+ +. ++||-++-. +|....-..+.-.++++.+.+ ++||.+=+.
T Consensus 17 D~~~l~~lv~~li~~-v~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~-------------rvpviaGvg~~ 72 (283)
T 2pcq_A 17 DEEAFRELAQALEPL-VDGLLVYGS----------NGEGVHLTPEERARGLRALRP-------------RKPFLVGLMEE 72 (283)
T ss_dssp CHHHHHHHHHHHGGG-SSCCEETCT----------TTTGGGSCHHHHHHHHHTCCC-------------SSCCEEEECCS
T ss_pred CHHHHHHHHHHHHhh-CCEEEECCc----------CcCchhcCHHHHHHHHHHHHh-------------CCcEEEeCCCC
Confidence 667777777765 55 888776433 455444456655677775433 346666555
Q ss_pred -hhcHHHHHHHHhC-CCCeEEEe
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~itih 222 (240)
..+++++++.+++ |+|++.+-
T Consensus 73 ~t~~ai~la~~A~~~Gadavlv~ 95 (283)
T 2pcq_A 73 TLPQAEGALLEAKAAGAMALLAT 95 (283)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHHHhcCCCEEEec
Confidence 5678899999999 99999883
No 399
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=58.03 E-value=15 Score=38.44 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh-hcHHHHHHHHhC-CCCeEEEecc
Q psy7344 165 DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV-AKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 165 ~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~-~~~~~~~~~l~~-G~~~itih~R 224 (240)
.+|+.+.++++.+++.. ...||.+|+-. ..+.+.++.+++ |+|+|++-|.
T Consensus 975 ~s~edl~~~I~~Lk~~~----------~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~ 1026 (1479)
T 1ea0_A 975 YSIEDLAQLIYDLKQIN----------PDAKVTVKLVSRSGIGTIAAGVAKANADIILISGN 1026 (1479)
T ss_dssp SSHHHHHHHHHHHHHHC----------TTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECT
T ss_pred CCHHHHHHHHHHHHHhC----------CCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCC
Confidence 45788889999999871 27899999983 345567888888 9999999554
No 400
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=57.90 E-value=35 Score=29.78 Aligned_cols=81 Identities=12% Similarity=0.072 Sum_probs=52.5
Q ss_pred CceeEEeecCCHHH-HHHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKN-LTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~g~d~~~-~~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.|+...+..+++++ ..++++.++ .|+..+-+..|+ .+++.-.+.++++++++ +.
T Consensus 132 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avR~~~---------g~ 187 (370)
T 1chr_A 132 IPIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGF---------------RSPQDDLIHMEALSNSL---------GS 187 (370)
T ss_dssp EEBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSS---------------SCSHHHHHHHHHHHHHS---------ST
T ss_pred eeEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCC---------------CCHHHHHHHHHHHHHhc---------CC
Confidence 45544454456544 556677776 588888887763 23444456677777762 12
Q ss_pred CeeeEEeee----hhcHHHHHHHHhC-CCCeE
Q psy7344 193 DINIGCPQM----VAKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 193 ~~pvsvK~r----~~~~~~~~~~l~~-G~~~i 219 (240)
++++.+... .++..++++.|++ |+++|
T Consensus 188 ~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i 219 (370)
T 1chr_A 188 KAYLRVDVNQAWDEQVASVYIPELEALGVELI 219 (370)
T ss_dssp TCCEEEECTTCCCTTHHHHHTHHHHTTTEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 456666655 3567889999999 98887
No 401
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=57.64 E-value=17 Score=32.22 Aligned_cols=81 Identities=9% Similarity=-0.001 Sum_probs=51.1
Q ss_pred CceeEEeecCCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
.|+...+...+++++.+.++. ++.|+..+-+..|++ +++.-.+.++++++++ + +.+
T Consensus 154 v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~---g-----g~~ 210 (391)
T 4e8g_A 154 VPSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR---------------PVEIDIETVRKVWERI---R-----GTG 210 (391)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHH---T-----TTT
T ss_pred EEEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHh---C-----CCC
Confidence 466666666789888776655 467899999888852 3444445566665542 0 023
Q ss_pred eeeE--Eeeeh--hcHHHHHHHHhC-CCCeE
Q psy7344 194 INIG--CPQMV--AKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 194 ~pvs--vK~r~--~~~~~~~~~l~~-G~~~i 219 (240)
+++. ++.++ .+..++++.|++ ++ +|
T Consensus 211 ~~L~vDaN~~w~~~~A~~~~~~L~~~~i-~i 240 (391)
T 4e8g_A 211 TRLAVDGNRSLPSRDALRLSRECPEIPF-VL 240 (391)
T ss_dssp CEEEEECTTCCCHHHHHHHHHHCTTSCE-EE
T ss_pred CeEEEeCCCCCCHHHHHHHHHHHhhcCe-EE
Confidence 3444 44444 456788888888 88 65
No 402
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=57.36 E-value=24 Score=30.64 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHcc-CCCEEEecCC--Cc--hhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEe
Q psy7344 125 DSKNLTEAAKLAEP-HCDGIDINIG--CP--QMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCP 199 (240)
Q Consensus 125 d~~~~~~aa~~le~-~~d~Idin~g--CP--~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK 199 (240)
+.++..+.++.+.+ |+|.||++.| -| .+. +|.....+|+.++++.+.+ .+.++.+=
T Consensus 28 ~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~-----~g~~~~~~~e~l~~i~~~~--------------~~~~i~~l 88 (345)
T 1nvm_A 28 TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFN-----YGFGRHTDLEYIEAVAGEI--------------SHAQIATL 88 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTT-----TBCCSSCHHHHHHHHHTTC--------------SSSEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCc-----ccCCCCCHHHHHHHHHhhC--------------CCCEEEEE
Confidence 67777888888866 8999999732 12 121 2333445666666655431 23344432
Q ss_pred -eehhcHHHHHHHHhC-CCCeEEEe
Q psy7344 200 -QMVAKRGHYGAYLQD-DWPLLTEL 222 (240)
Q Consensus 200 -~r~~~~~~~~~~l~~-G~~~itih 222 (240)
.+-....++++.+.+ |++.+.|.
T Consensus 89 ~~p~~~~~~~i~~a~~aGvd~v~I~ 113 (345)
T 1nvm_A 89 LLPGIGSVHDLKNAYQAGARVVRVA 113 (345)
T ss_dssp ECBTTBCHHHHHHHHHHTCCEEEEE
T ss_pred ecCCcccHHHHHHHHhCCcCEEEEE
Confidence 111123567777777 99998775
No 403
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=57.27 E-value=53 Score=28.85 Aligned_cols=78 Identities=15% Similarity=0.084 Sum_probs=43.8
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+-.- +-+.++..+.++.+++ +.+.||= |.. ..|++..+++.+.
T Consensus 207 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~----P~~-----------~~~~~~~~~l~~~--------------- 256 (393)
T 2og9_A 207 AVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEE----PLD-----------AYDHEGHAALALQ--------------- 256 (393)
T ss_dssp TSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEEC----CSC-----------TTCHHHHHHHHHH---------------
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC----CCC-----------cccHHHHHHHHHh---------------
Confidence 345555432 2366666677777765 4566652 111 1466766666554
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+++||..-.++.+..++.+.++. .+|.|.+
T Consensus 257 ~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 287 (393)
T 2og9_A 257 FDTPIATGEMLTSAAEHGDLIRHRAADYLMP 287 (393)
T ss_dssp CSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCCEEeCCCcCCHHHHHHHHHCCCCCEEee
Confidence 45566666665555566666666 5666654
No 404
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=57.17 E-value=44 Score=26.85 Aligned_cols=94 Identities=15% Similarity=-0.047 Sum_probs=51.7
Q ss_pred eeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCee
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDIN 195 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~p 195 (240)
+.++...-...++.++.+.+.+ |+++|++...-|... ...+.--....+++.+.++.+.+++. .+.
T Consensus 12 lg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~------------gl~ 78 (262)
T 3p6l_A 12 LGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGG-KWGDKVFDFNLDAQTQKEIKELAASK------------GIK 78 (262)
T ss_dssp EEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCG-GGTTCEESTTCCHHHHHHHHHHHHHT------------TCE
T ss_pred EEEEecccCCCCHHHHHHHHHHcCCCEEeecCCccccc-ccccccccccCCHHHHHHHHHHHHHc------------CCe
Confidence 4455433222345666666644 899999976532110 00000001123567777777777664 222
Q ss_pred eEE-ee----ehhcHHHHHHHHhC-CCCeEEEec
Q psy7344 196 IGC-PQ----MVAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 196 vsv-K~----r~~~~~~~~~~l~~-G~~~itih~ 223 (240)
++. -. ..+...+.++.+.. |++.|++|.
T Consensus 79 i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 112 (262)
T 3p6l_A 79 IVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEP 112 (262)
T ss_dssp EEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEeccCCccHHHHHHHHHHHHHcCCCEEEecC
Confidence 221 11 13456778888888 999999985
No 405
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=56.70 E-value=19 Score=31.00 Aligned_cols=50 Identities=10% Similarity=-0.058 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh--hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 165 DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV--AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 165 ~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~--~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.+++.+.+.++.+++. ++.|+.+.+-+ .+..+.++.+.+ |++.|.+|+-.
T Consensus 60 ~~~~~l~~~i~~i~~~-----------~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~ 112 (326)
T 3bo9_A 60 MKPDDLRKAISELRQK-----------TDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN 112 (326)
T ss_dssp CCHHHHHHHHHHHHTT-----------CSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC
T ss_pred CCHHHHHHHHHHHHHh-----------cCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC
Confidence 4788888888888876 56788888875 356788888888 99999999754
No 406
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=56.53 E-value=75 Score=28.14 Aligned_cols=98 Identities=5% Similarity=-0.076 Sum_probs=56.6
Q ss_pred CceeEEeecCCHHHHHHHHHH-HccCCCEEEecCCCchhhhhc-----ccccccccC---CHHHHHHHHHHhhhcccccc
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKR-----GHYGAYLQD---DWPLLTNLVYSPNMVHFVIA 185 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~-----~g~G~~l~~---~p~~i~~iv~~~~~~~~~i~ 185 (240)
.|+...+.+.+++++.+.++. +++|+..+-+..|.+...... .+....... +++...+.++++++++ +
T Consensus 143 v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~---G 219 (421)
T 4hnl_A 143 IPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKY---G 219 (421)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHH---T
T ss_pred cceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHh---C
Confidence 566666667788887776555 467899998888754321111 111111111 2344455666777652 1
Q ss_pred CCCCCCCCeeeEEeeeh--hcHHHHHHHHhC-CCCeE
Q psy7344 186 EPHCDGNDINIGCPQMV--AKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 186 ~~~~~~~~~pvsvK~r~--~~~~~~~~~l~~-G~~~i 219 (240)
.. ..+-+-+..++ +..+++++.|++ ++.++
T Consensus 220 ~~----~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i 252 (421)
T 4hnl_A 220 NQ----FQMLHDVHERLHPNQAIQFAKAAEPYQLFFL 252 (421)
T ss_dssp TS----SEEEEECTTCSCHHHHHHHHHHHGGGCCSEE
T ss_pred CC----ceEeccccccCCHHHHHHHHHHhhhhhhccc
Confidence 10 23344444443 567889999999 98876
No 407
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=56.32 E-value=38 Score=30.75 Aligned_cols=30 Identities=13% Similarity=0.194 Sum_probs=20.7
Q ss_pred eEEeee-hhcHH-HHHHH-HhC-CCCeEEEeccc
Q psy7344 196 IGCPQM-VAKRG-HYGAY-LQD-DWPLLTELGKM 225 (240)
Q Consensus 196 vsvK~r-~~~~~-~~~~~-l~~-G~~~itih~R~ 225 (240)
+-.|.- +.+|. .+++. ++. |+|++|+|+=.
T Consensus 82 lDlK~~DIpnT~~~~a~~~~~~lg~d~vTvh~~~ 115 (453)
T 3qw4_B 82 LDAKRGDIADTADAYATSAFKHLNAHAITASPYM 115 (453)
T ss_dssp EEEEECCCHHHHHHHHHHHHTTSCCSEEEECSTT
T ss_pred EEeecCChHHHHHHHHHHHHHHcCCCEEEEcccC
Confidence 445655 56664 56666 557 99999999854
No 408
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=55.99 E-value=37 Score=29.85 Aligned_cols=43 Identities=16% Similarity=0.004 Sum_probs=28.5
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecC-CHHHHHHHHHHHcc-CCCEEEe
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGN-DSKNLTEAAKLAEP-HCDGIDI 145 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~-d~~~~~~aa~~le~-~~d~Idi 145 (240)
+.++++++- ....|++++-+.+ +++++..+++.+.. |..-|-|
T Consensus 202 n~~LL~~va----~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 202 NFRLLSKAG----SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp CHHHHHHHH----TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CHHHHHHHH----ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 344444443 2358999998765 89999999998855 5433433
No 409
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=55.90 E-value=59 Score=28.82 Aligned_cols=76 Identities=5% Similarity=-0.075 Sum_probs=45.4
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+-.- +-+.++..++++.+++ +.+.||. |. .|++..+++.+.
T Consensus 213 d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~----P~-------------~d~~~~~~l~~~--------------- 260 (409)
T 3go2_A 213 DVEILLDLNFNAKPEGYLKILRELADFDLFWVEI----DS-------------YSPQGLAYVRNH--------------- 260 (409)
T ss_dssp TSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEEC----CC-------------SCHHHHHHHHHT---------------
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEe----Cc-------------CCHHHHHHHHhh---------------
Confidence 456666542 2377888888888877 6788883 31 256665555443
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+.+||..-.++.+..++.+.++. .+|.|.+
T Consensus 261 ~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 291 (409)
T 3go2_A 261 SPHPISSCETLFGIREFKPFFDANAVDVAIV 291 (409)
T ss_dssp CSSCEEECTTCCHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 44566655555455555555555 5566554
No 410
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=55.03 E-value=52 Score=27.64 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=45.8
Q ss_pred eecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEee
Q psy7344 121 FCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQ 200 (240)
Q Consensus 121 i~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~ 200 (240)
++..+.++ +....+.|+|-|+|+.+ . . -+| +-+.+..++.+++. .++||-+=+
T Consensus 6 vc~~s~~~---a~~A~~~GAdRIELc~~---L-~-~GG----lTPS~g~i~~~~~~---------------~~ipv~vMI 58 (256)
T 1twd_A 6 ICCYSMEC---ALTAQQNGADRVELCAA---P-K-EGG----LTPSLGVLKSVRQR---------------VTIPVHPII 58 (256)
T ss_dssp EEESSHHH---HHHHHHTTCSEEEECBC---G-G-GTC----BCCCHHHHHHHHHH---------------CCSCEEEBC
T ss_pred EEeCCHHH---HHHHHHcCCCEEEEcCC---c-c-cCC----CCCCHHHHHHHHHH---------------cCCceEEEE
Confidence 34455554 33444468999999654 1 1 133 45667776665543 578999888
Q ss_pred e-------hh-----cHHHHHHHHhC-CCCeEEEec
Q psy7344 201 M-------VA-----KRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 201 r-------~~-----~~~~~~~~l~~-G~~~itih~ 223 (240)
| ++ ...+=++.+.+ |++++.+-.
T Consensus 59 RPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~ 94 (256)
T 1twd_A 59 RPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGV 94 (256)
T ss_dssp CSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEee
Confidence 8 11 12233445667 999998843
No 411
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=55.01 E-value=31 Score=31.40 Aligned_cols=88 Identities=9% Similarity=-0.083 Sum_probs=46.4
Q ss_pred CHHHHHH-HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHH---HHHhhhccccccCCCCCCCCeeeEEee
Q psy7344 125 DSKNLTE-AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNL---VYSPNMVHFVIAEPHCDGNDINIGCPQ 200 (240)
Q Consensus 125 d~~~~~~-aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~i---v~~~~~~~~~i~~~~~~~~~~pvsvK~ 200 (240)
+.+...+ +.+++++|+|.||||.- . .+-|+......|.++++ ++++++..+.+ + .++|+|+-.
T Consensus 210 ~~~~al~~A~~mv~~GAdIIDIGge-S------TrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~--~----~~vpISIDT 276 (442)
T 3mcm_A 210 DDNQRKLNLDELIQSGAEIIDIGAE-S------TKPDAKPISIEEEFNKLNEFLEYFKSQLANL--I----YKPLVSIDT 276 (442)
T ss_dssp CCCHHHHHHHHHHHHTCSEEEEECC-C------CCC----CCHHHHHHHHHHHHHHHHHHTTTC--S----SCCEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCC-C------CCCCCCCCCHHHHHHHHHHHHHHHHhhcccc--C----CCCeEEEeC
Confidence 3444444 44456779999999842 1 11233333444555555 55555410000 0 156788776
Q ss_pred e--------hh---------------cHHHHHHHHhC-CCCeEEEeccc
Q psy7344 201 M--------VA---------------KRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 201 r--------~~---------------~~~~~~~~l~~-G~~~itih~R~ 225 (240)
. +. ...++++.+.+ |+..|.+|.|.
T Consensus 277 ~~~~VaeaAL~~~aGa~i~INDVsg~~d~~m~~v~a~~g~~vVlMh~~G 325 (442)
T 3mcm_A 277 RKLEVMQKILAKHHDIIWMINDVECNNIEQKAQLIAKYNKKYVIIHNLG 325 (442)
T ss_dssp CCHHHHHHHHHHHGGGCCEEEECCCTTHHHHHHHHHHHTCEEEEECC--
T ss_pred CCHHHHHHHHhhCCCCCEEEEcCCCCCChHHHHHHHHhCCeEEEECCCC
Confidence 6 11 12356667778 99999999875
No 412
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=54.56 E-value=66 Score=27.43 Aligned_cols=74 Identities=3% Similarity=-0.130 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-
Q psy7344 124 NDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM- 201 (240)
Q Consensus 124 ~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r- 201 (240)
.+++.+.+.++.+.+ |++.|.|.=- .| ...|+.+.++++++++.+ .++|+.+-.=
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT----------~G---~~~P~~v~~lv~~l~~~~----------~~~~l~~H~Hn 210 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDT----------IG---AANPAQVETVLEALLARF----------PANQIALHFHD 210 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECS----------SC---CCCHHHHHHHHHHHHTTS----------CGGGEEEECBG
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCC----------CC---CcCHHHHHHHHHHHHHhC----------CCCeEEEEECC
Confidence 378888898888866 7887766311 22 258999999999999872 1456665442
Q ss_pred -hhcHHHHHHHHhC-CCCeEE
Q psy7344 202 -VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 202 -~~~~~~~~~~l~~-G~~~it 220 (240)
......-+-...+ |++.|-
T Consensus 211 d~Gla~AN~laAv~aGa~~vd 231 (307)
T 1ydo_A 211 TRGTALANMVTALQMGITVFD 231 (307)
T ss_dssp GGSCHHHHHHHHHHHTCCEEE
T ss_pred CCchHHHHHHHHHHhCCCEEE
Confidence 2222222222334 888764
No 413
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=54.37 E-value=40 Score=28.83 Aligned_cols=72 Identities=7% Similarity=0.021 Sum_probs=41.6
Q ss_pred CHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+.++...+++...+ |+|.|-.+-|= ...| ..++-++-+.+.++.. ..++-+|.-
T Consensus 186 t~eei~~A~~ia~eaGADfVKTSTGf-------~~~G----AT~edv~lmr~~v~~~------------g~~v~VKAAGG 242 (288)
T 3oa3_A 186 TADEIIAGCVLSSLAGADYVKTSTGF-------NGPG----ASIENVSLMSAVCDSL------------QSETRVKASGG 242 (288)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSS-------SSCC----CCHHHHHHHHHHHHHS------------SSCCEEEEESS
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCCCC-------CCCC----CCHHHHHHHHHHHHHh------------CCCceEEEeCC
Confidence 56677778887754 89999887661 1112 3444444443333221 113444444
Q ss_pred hhcHHHHHHHHhCCCCeE
Q psy7344 202 VAKRGHYGAYLQDDWPLL 219 (240)
Q Consensus 202 ~~~~~~~~~~l~~G~~~i 219 (240)
+.+..+..++++.||+.|
T Consensus 243 Irt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 243 IRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp CCSHHHHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHcCCcee
Confidence 667777777776698854
No 414
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=54.37 E-value=35 Score=29.91 Aligned_cols=81 Identities=11% Similarity=0.120 Sum_probs=50.7
Q ss_pred CceeEEeec--CCH---HHHHHHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCC
Q psy7344 115 CGHSLMFCG--NDS---KNLTEAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPH 188 (240)
Q Consensus 115 ~pvivqi~g--~d~---~~~~~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~ 188 (240)
.|+...+++ .++ +.+.+.++.. +.|+++|.+..|+ .+++...++++++++++
T Consensus 124 vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~------- 181 (382)
T 2gdq_A 124 IPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGG---------------TSFKEDVRHINALQHTA------- 181 (382)
T ss_dssp EEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHH-------
T ss_pred eeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhh-------
Confidence 455433322 567 7777666554 6699999998774 24556667777777762
Q ss_pred CCCCCeeeEEeee----hhcHHHHHHHHhC--CCCeE
Q psy7344 189 CDGNDINIGCPQM----VAKRGHYGAYLQD--DWPLL 219 (240)
Q Consensus 189 ~~~~~~pvsvK~r----~~~~~~~~~~l~~--G~~~i 219 (240)
+.++++.+... .++..++++.|++ |+++|
T Consensus 182 --G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~i 216 (382)
T 2gdq_A 182 --GSSITMILDANQSYDAAAAFKWERYFSEWTNIGWL 216 (382)
T ss_dssp --CTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEE
T ss_pred --CCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEE
Confidence 13566666554 3456777887766 45544
No 415
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=54.32 E-value=44 Score=29.81 Aligned_cols=77 Identities=13% Similarity=0.006 Sum_probs=41.4
Q ss_pred CceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.++.+-.- +-++++..++++.+++ +.+.||= |.. ..|++.++++.+. +
T Consensus 231 ~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEe----P~~-----------~~d~~~~~~l~~~---------------~ 280 (412)
T 3stp_A 231 NDLMLECYMGWNLDYAKRMLPKLAPYEPRWLEE----PVI-----------ADDVAGYAELNAM---------------N 280 (412)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC----CSC-----------TTCHHHHHHHHHT---------------C
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC----CCC-----------cccHHHHHHHHhC---------------C
Confidence 44544431 2366666666666665 4566652 211 1366666555543 4
Q ss_pred CeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 193 DINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 193 ~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
.+||..-.++.+..++.+.++. .+|.|.+
T Consensus 281 ~iPIa~dE~~~~~~~~~~li~~~a~D~v~i 310 (412)
T 3stp_A 281 IVPISGGEHEFSVIGCAELINRKAVSVLQY 310 (412)
T ss_dssp SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCEEeCCCCCCHHHHHHHHHcCCCCEEec
Confidence 5666666665555556666666 5565544
No 416
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=53.98 E-value=19 Score=31.42 Aligned_cols=62 Identities=6% Similarity=-0.127 Sum_probs=38.1
Q ss_pred HHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHH
Q psy7344 130 TEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYG 209 (240)
Q Consensus 130 ~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~ 209 (240)
.++.+.++.|+|+|++--. +|+.++++++.++.. ..+-+|--+. .+-+
T Consensus 242 dea~eAl~aGaD~I~LDn~-----------------~~~~l~~av~~l~~~-----------v~ieaSGGIt----~~~I 289 (320)
T 3paj_A 242 AELEEAISAGADIIMLDNF-----------------SLEMMREAVKINAGR-----------AALENSGNIT----LDNL 289 (320)
T ss_dssp HHHHHHHHTTCSEEEEESC-----------------CHHHHHHHHHHHTTS-----------SEEEEESSCC----HHHH
T ss_pred HHHHHHHHcCCCEEEECCC-----------------CHHHHHHHHHHhCCC-----------CeEEEECCCC----HHHH
Confidence 3444455568999998443 678888888876543 2222232222 3445
Q ss_pred HHHhC-CCCeEEEec
Q psy7344 210 AYLQD-DWPLLTELG 223 (240)
Q Consensus 210 ~~l~~-G~~~itih~ 223 (240)
+.+.+ |+|.|.+-.
T Consensus 290 ~~~a~tGVD~isvGa 304 (320)
T 3paj_A 290 KECAETGVDYISVGA 304 (320)
T ss_dssp HHHHTTTCSEEECTH
T ss_pred HHHHHcCCCEEEECc
Confidence 55667 999999833
No 417
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=53.95 E-value=32 Score=32.20 Aligned_cols=23 Identities=4% Similarity=-0.270 Sum_probs=14.3
Q ss_pred hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 203 AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 203 ~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+...+....=.+ |+|++|||+=.
T Consensus 293 e~~~d~ie~QAeqGVDfmTIHaGv 316 (612)
T 3epo_A 293 EVFRDTLIEQCEQGVDYFTIHAGV 316 (612)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTC
T ss_pred HHHHHHHHHHHHhCCCEEEEcccc
Confidence 333343333345 99999999833
No 418
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=53.80 E-value=52 Score=27.11 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=28.1
Q ss_pred CceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIG 148 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~g 148 (240)
.+++..+++.|+++..+.++.+.+ |++.|++-+-
T Consensus 34 ~~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~ 68 (232)
T 4e38_A 34 LKVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFR 68 (232)
T ss_dssp HCEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETT
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 478888899999999999998865 7899998443
No 419
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=53.47 E-value=23 Score=30.50 Aligned_cols=70 Identities=7% Similarity=-0.045 Sum_probs=44.2
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
.|+.|-. . ++.++.+.++.|+|.|++-- -.|+.++++++.++.. ..+
T Consensus 208 ~kIeVEv--~---tl~e~~eAl~aGaDiImLDn-----------------~s~~~l~~av~~~~~~-----------v~l 254 (300)
T 3l0g_A 208 EYIAIEC--D---NISQVEESLSNNVDMILLDN-----------------MSISEIKKAVDIVNGK-----------SVL 254 (300)
T ss_dssp CCEEEEE--S---SHHHHHHHHHTTCSEEEEES-----------------CCHHHHHHHHHHHTTS-----------SEE
T ss_pred CCEEEEE--C---CHHHHHHHHHcCCCEEEECC-----------------CCHHHHHHHHHhhcCc-----------eEE
Confidence 4555543 3 34556666667899999832 2678888888876654 333
Q ss_pred eeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 195 NIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 195 pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
-+|.-+..++. +.+.+ |+|.|++
T Consensus 255 eaSGGIt~~~i----~~~A~tGVD~Isv 278 (300)
T 3l0g_A 255 EVSGCVNIRNV----RNIALTGVDYISI 278 (300)
T ss_dssp EEESSCCTTTH----HHHHTTTCSEEEC
T ss_pred EEECCCCHHHH----HHHHHcCCCEEEe
Confidence 44444444443 44557 9999998
No 420
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=53.21 E-value=83 Score=27.13 Aligned_cols=20 Identities=10% Similarity=0.034 Sum_probs=11.9
Q ss_pred CHHHHHHHHHHHcc-CCCEEE
Q psy7344 125 DSKNLTEAAKLAEP-HCDGID 144 (240)
Q Consensus 125 d~~~~~~aa~~le~-~~d~Id 144 (240)
+.++..+.++.+++ +.+.||
T Consensus 200 ~~~~a~~~~~~l~~~~i~~iE 220 (370)
T 1nu5_A 200 DEQTASIWIPRLEEAGVELVE 220 (370)
T ss_dssp CHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHhcCcceEe
Confidence 56666666666655 455555
No 421
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=52.53 E-value=35 Score=30.24 Aligned_cols=80 Identities=10% Similarity=-0.015 Sum_probs=53.5
Q ss_pred CCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCC
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGND 193 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~ 193 (240)
..|+++-| ..| ...+.+.++.|+|.+-||-| + + .+.+.++++++..++. +
T Consensus 84 ~vPlvaDi-Hf~---~~lal~a~e~G~dklRINPG--N-------i-----g~~~~~~~vv~~ak~~------------~ 133 (366)
T 3noy_A 84 PMPVIADI-HFA---PSYAFLSMEKGVHGIRINPG--N-------I-----GKEEIVREIVEEAKRR------------G 133 (366)
T ss_dssp SSCEEEEC-CSC---HHHHHHHHHTTCSEEEECHH--H-------H-----SCHHHHHHHHHHHHHH------------T
T ss_pred CCCEEEeC-CCC---HHHHHHHHHhCCCeEEECCc--c-------c-----CchhHHHHHHHHHHHc------------C
Confidence 47887653 123 33444566778999999988 1 1 2578899999988885 3
Q ss_pred eeeEE--eee------------------hhcHHHHHHHHhC-CCCeEEEec
Q psy7344 194 INIGC--PQM------------------VAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 194 ~pvsv--K~r------------------~~~~~~~~~~l~~-G~~~itih~ 223 (240)
+|+-+ +-- +++..++++.+++ |-+.|.+-.
T Consensus 134 ~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~ 184 (366)
T 3noy_A 134 VAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSI 184 (366)
T ss_dssp CEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEee
Confidence 34433 211 4567788999999 998877643
No 422
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=52.25 E-value=20 Score=30.78 Aligned_cols=59 Identities=5% Similarity=-0.032 Sum_probs=36.0
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCC--HHHHHHHHHH
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDD--WPLLTNLVYS 176 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~--p~~i~~iv~~ 176 (240)
+++++++...+. ...|+++ |+.+.+.+++.++++.|+|+|-+|.. +..| |+++++++..
T Consensus 214 ~e~V~~I~~~~~-~~iPV~v---GGGIrs~Eda~~ll~aGAD~VVVGSA--------------av~d~~Pelv~e~a~~ 274 (286)
T 3vk5_A 214 PEVVRHFRKGLG-PDQVLFV---SGNVRSGRQVTEYLDSGADYVGFAGA--------------LEQPDWRSALAEIAGR 274 (286)
T ss_dssp HHHHHHHHHHSC-TTCEEEE---ESSCCSHHHHHHHHHTTCSEEEESGG--------------GSSTTHHHHHHHHHC-
T ss_pred HHHHHHHHHhcC-CCCCEEE---EeCCCCHHHHHHHHHcCCCEEEECch--------------hhcCCCHHHHHHHHHh
Confidence 455555544321 0245443 35555555677777788898877544 5678 8998888754
No 423
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=52.13 E-value=76 Score=26.70 Aligned_cols=73 Identities=10% Similarity=0.007 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++.+.+.++.+.+ |++.|-|.= -.| ...|+.+.++++++++.+ .++|+.+-.-
T Consensus 154 ~~~~~~~~~~~~~~~Ga~~i~l~D----------T~G---~~~P~~~~~lv~~l~~~~----------~~~~i~~H~Hn~ 210 (298)
T 2cw6_A 154 SPAKVAEVTKKFYSMGCYEISLGD----------TIG---VGTPGIMKDMLSAVMQEV----------PLAALAVHCHDT 210 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEE----------TTS---CCCHHHHHHHHHHHHHHS----------CGGGEEEEEBCT
T ss_pred CHHHHHHHHHHHHHcCCCEEEecC----------CCC---CcCHHHHHHHHHHHHHhC----------CCCeEEEEECCC
Confidence 78888888888865 788876631 122 258999999999999872 2456666432
Q ss_pred hhcHH-HHHHHHhCCCCeEE
Q psy7344 202 VAKRG-HYGAYLQDDWPLLT 220 (240)
Q Consensus 202 ~~~~~-~~~~~l~~G~~~it 220 (240)
..... .....++.|++.|-
T Consensus 211 ~Gla~An~laA~~aGa~~vd 230 (298)
T 2cw6_A 211 YGQALANTLMALQMGVSVVD 230 (298)
T ss_dssp TSCHHHHHHHHHHTTCCEEE
T ss_pred CchHHHHHHHHHHhCCCEEE
Confidence 22222 22333344998764
No 424
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=51.92 E-value=15 Score=29.74 Aligned_cols=66 Identities=11% Similarity=0.005 Sum_probs=39.0
Q ss_pred HHHccCCCEEEecCCCchhhhhcccccccccCCH--HHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHH
Q psy7344 134 KLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW--PLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAY 211 (240)
Q Consensus 134 ~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p--~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~ 211 (240)
..++.|+|.|.++... ..+| +.+.++++.+++.. .+.++.+... +. +-++.
T Consensus 96 ~~~~~Gad~V~l~~~~--------------~~~~~~~~~~~~i~~i~~~~----------~~~~v~~~~~--t~-~ea~~ 148 (234)
T 1yxy_A 96 QLAALNIAVIAMDCTK--------------RDRHDGLDIASFIRQVKEKY----------PNQLLMADIS--TF-DEGLV 148 (234)
T ss_dssp HHHTTTCSEEEEECCS--------------SCCTTCCCHHHHHHHHHHHC----------TTCEEEEECS--SH-HHHHH
T ss_pred HHHHcCCCEEEEcccc--------------cCCCCCccHHHHHHHHHHhC----------CCCeEEEeCC--CH-HHHHH
Confidence 3456689999887652 1122 12345566555541 2456666544 22 23666
Q ss_pred HhC-CCCeE--EEecccc
Q psy7344 212 LQD-DWPLL--TELGKMA 226 (240)
Q Consensus 212 l~~-G~~~i--tih~R~~ 226 (240)
+++ |+|.| ++++.+.
T Consensus 149 a~~~Gad~i~~~v~g~~~ 166 (234)
T 1yxy_A 149 AHQAGIDFVGTTLSGYTP 166 (234)
T ss_dssp HHHTTCSEEECTTTTSST
T ss_pred HHHcCCCEEeeeccccCC
Confidence 677 99999 7888764
No 425
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=51.77 E-value=21 Score=30.63 Aligned_cols=63 Identities=6% Similarity=-0.106 Sum_probs=38.9
Q ss_pred HHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHH
Q psy7344 129 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHY 208 (240)
Q Consensus 129 ~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~ 208 (240)
+.++.+.++.|+|.|++-- -.|+.++++++.++.. ..+-+|.-+..++
T Consensus 208 l~ea~eAl~aGaD~I~LDn-----------------~~~~~l~~av~~~~~~-----------v~ieaSGGIt~~~---- 255 (287)
T 3tqv_A 208 LDELNQAIAAKADIVMLDN-----------------FSGEDIDIAVSIARGK-----------VALEVSGNIDRNS---- 255 (287)
T ss_dssp HHHHHHHHHTTCSEEEEES-----------------CCHHHHHHHHHHHTTT-----------CEEEEESSCCTTT----
T ss_pred HHHHHHHHHcCCCEEEEcC-----------------CCHHHHHHHHHhhcCC-----------ceEEEECCCCHHH----
Confidence 3455555566889998833 2678888888876544 2233333333444
Q ss_pred HHHHhC-CCCeEEEec
Q psy7344 209 GAYLQD-DWPLLTELG 223 (240)
Q Consensus 209 ~~~l~~-G~~~itih~ 223 (240)
++.+.+ |+|.|.+-+
T Consensus 256 i~~~a~tGVD~IsvGa 271 (287)
T 3tqv_A 256 IVAIAKTGVDFISVGA 271 (287)
T ss_dssp HHHHHTTTCSEEECSH
T ss_pred HHHHHHcCCCEEEECh
Confidence 344557 999999833
No 426
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=51.58 E-value=81 Score=27.19 Aligned_cols=73 Identities=11% Similarity=-0.128 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+++.+.+.++.+.+ |++.|.|.=- .| ...|+.+.++++++++.+ .++|+.+-.=
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT----------~G---~~~P~~v~~lv~~l~~~~----------p~~~i~~H~Hnd 223 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDT----------LG---VLSPEETFQGVDSLIQKY----------PDIHFEFHGHND 223 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECT----------TC---CCCHHHHHHHHHHHHHHC----------TTSCEEEECBCT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecC----------CC---CcCHHHHHHHHHHHHHhc----------CCCeEEEEecCC
Confidence 57888888888766 7887766211 22 258999999999999872 1556665433
Q ss_pred hhcHH-HHHHHHhCCCCeEE
Q psy7344 202 VAKRG-HYGAYLQDDWPLLT 220 (240)
Q Consensus 202 ~~~~~-~~~~~l~~G~~~it 220 (240)
..... -...+++.|++.|-
T Consensus 224 ~GlA~AN~laAv~aGa~~vd 243 (337)
T 3ble_A 224 YDLSVANSLQAIRAGVKGLH 243 (337)
T ss_dssp TSCHHHHHHHHHHTTCSEEE
T ss_pred cchHHHHHHHHHHhCCCEEE
Confidence 11222 22333334888764
No 427
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=51.56 E-value=23 Score=30.53 Aligned_cols=50 Identities=8% Similarity=-0.023 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh--hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 165 DDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV--AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 165 ~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~--~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
.+++.+.+.++.+++. ++.|+.+.+-+ .+..+.++.+.+ |+|.|.+|+-.
T Consensus 46 ~~~~~~~~~i~~i~~~-----------~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~ 98 (332)
T 2z6i_A 46 APKEVVKANIDKIKSL-----------TDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN 98 (332)
T ss_dssp CCHHHHHHHHHHHHHH-----------CCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC
T ss_pred CCHHHHHHHHHHHHHh-----------cCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC
Confidence 4788888888888776 56688888875 345778888888 99999999843
No 428
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=50.92 E-value=22 Score=33.27 Aligned_cols=90 Identities=8% Similarity=-0.005 Sum_probs=48.3
Q ss_pred CHHHHHHHH-HHHccC-----CCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEE
Q psy7344 125 DSKNLTEAA-KLAEPH-----CDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGC 198 (240)
Q Consensus 125 d~~~~~~aa-~~le~~-----~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsv 198 (240)
+.+...+.+ +++++| +|.||||.- . .+-|+.-....+.+.+++..++....- ..+ ...++|+|+
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGge-S------TRPGa~~vs~eEEl~RvvpvI~~i~~~-~~~--~~~~vpISI 316 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGC-S------TRPNSIQASEEEEIRRSIPLIKAIRES-TEL--PQDKVILSI 316 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECS-C------CSTTCCCCCHHHHHHHHHHHHHHHHHC-SSS--CGGGEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCC-C------CCCCCCCCCHHHHHHHHHHHHHHHHhh-ccc--cCCCCeEEE
Confidence 556655544 455779 999999742 1 112333345556666665444432000 000 003678998
Q ss_pred eeeh---------------hc------HHHHHHHHh-C-CCCeEEEecc
Q psy7344 199 PQMV---------------AK------RGHYGAYLQ-D-DWPLLTELGK 224 (240)
Q Consensus 199 K~r~---------------~~------~~~~~~~l~-~-G~~~itih~R 224 (240)
-..- .+ ..++++.+. . |+..|.+|-|
T Consensus 317 DT~~a~VaeaAl~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlmH~r 365 (545)
T 2bmb_A 317 DTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTR 365 (545)
T ss_dssp ECCCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEECCC
T ss_pred eCCcHHHHHHHHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEECCC
Confidence 7761 11 123455444 4 8888999977
No 429
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=50.77 E-value=29 Score=29.42 Aligned_cols=78 Identities=9% Similarity=-0.122 Sum_probs=51.5
Q ss_pred HHHHcc-CCCEEEecC-CCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--h----hc
Q psy7344 133 AKLAEP-HCDGIDINI-GCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM--V----AK 204 (240)
Q Consensus 133 a~~le~-~~d~Idin~-gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r--~----~~ 204 (240)
|+++++ |+++|-++- +.- . ..|+-...+-..+.+-..++.+..+ +++||++-+. + .+
T Consensus 29 A~~~~~aG~~ai~vsg~s~a-~---~~G~pD~~~vt~~em~~~~~~I~~~-----------~~~pviaD~d~Gyg~~~~~ 93 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIA-H---ARGRTDGQTLTRDEMGREVEAIVRA-----------VAIPVNADIEAGYGHAPED 93 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHH-H---HSCCCSSSSSCHHHHHHHHHHHHHH-----------CSSCEEEECTTCSSSSHHH
T ss_pred HHHHHHcCCCEEEECcHHHH-H---hCCCCCCCCCCHHHHHHHHHHHHhh-----------cCCCEEeecCCCCCCCHHH
Confidence 444544 788887762 211 1 1334443456777777777777777 6789999888 3 24
Q ss_pred HHHHHHHHhC-CCCeEEEeccc
Q psy7344 205 RGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 205 ~~~~~~~l~~-G~~~itih~R~ 225 (240)
..+.++.+++ |+++|.|-+-+
T Consensus 94 ~~~~v~~l~~aGaagv~iED~~ 115 (275)
T 2ze3_A 94 VRRTVEHFAALGVAGVNLEDAT 115 (275)
T ss_dssp HHHHHHHHHHTTCSEEEEECBC
T ss_pred HHHHHHHHHHcCCcEEEECCCc
Confidence 4677788888 99999986654
No 430
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=50.75 E-value=45 Score=26.98 Aligned_cols=77 Identities=8% Similarity=-0.178 Sum_probs=42.2
Q ss_pred HHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe-eeEEe------
Q psy7344 128 NLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI-NIGCP------ 199 (240)
Q Consensus 128 ~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~-pvsvK------ 199 (240)
.+.++++.+.+ |+++|++-..-|.... . ...+++.+.++.+.+++. .+ .+++-
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~------------gl~~~~~h~~~~~~ 75 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWR-----P--RALSPAEVEAFRALREAS------------GGLPAVIHASYLVN 75 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCS-----C--CCCCHHHHHHHHHHHHHT------------TCCCEEEECCTTCC
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCc-----C--CCCCHHHHHHHHHHHHHc------------CCceEEEecCcccC
Confidence 45566666544 8999999332221110 0 112456666776666553 11 22211
Q ss_pred ------ee---hhcHHHHHHHHhC-CCCeEEEec
Q psy7344 200 ------QM---VAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 200 ------~r---~~~~~~~~~~l~~-G~~~itih~ 223 (240)
.| ++...+.++.+.. |+..+++|+
T Consensus 76 l~s~~~~r~~~~~~~~~~i~~a~~lGa~~vv~h~ 109 (270)
T 3aam_A 76 LGAEGELWEKSVASLADDLEKAALLGVEYVVVHP 109 (270)
T ss_dssp TTCSSTHHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 11 2344566677788 999999985
No 431
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=50.53 E-value=39 Score=28.88 Aligned_cols=82 Identities=10% Similarity=-0.029 Sum_probs=50.4
Q ss_pred eeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeee
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINI 196 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pv 196 (240)
..+-++..+.++.. ...+.|+|-|+++-+ . .. +| +...+..++.+.+ . .++||
T Consensus 40 ~~lEvc~~s~~~a~---~A~~gGAdRIELc~~---l-~~-GG----lTPS~g~i~~a~~----~-----------~~ipV 92 (287)
T 3iwp_A 40 FLMEVCVDSVESAV---NAERGGADRIELCSG---L-SE-GG----TTPSMGVLQVVKQ----S-----------VQIPV 92 (287)
T ss_dssp SEEEEEESSHHHHH---HHHHHTCSEEEECBC---G-GG-TC----BCCCHHHHHHHHT----T-----------CCSCE
T ss_pred ceEEEEeCCHHHHH---HHHHhCCCEEEECCC---C-CC-CC----CCCCHHHHHHHHH----h-----------cCCCe
Confidence 45666667776544 334458999999633 1 11 22 4456666655544 3 56788
Q ss_pred EEeee-------hh-----cHHHHHHHHhC-CCCeEEEeccc
Q psy7344 197 GCPQM-------VA-----KRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 197 svK~r-------~~-----~~~~~~~~l~~-G~~~itih~R~ 225 (240)
-+=+| ++ ...+-++.+.+ |+|+|+++.=|
T Consensus 93 ~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~ 134 (287)
T 3iwp_A 93 FVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVFGALT 134 (287)
T ss_dssp EEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBC
T ss_pred EEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeC
Confidence 87777 11 22345566677 99999997533
No 432
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=50.52 E-value=51 Score=28.09 Aligned_cols=35 Identities=9% Similarity=-0.092 Sum_probs=24.6
Q ss_pred CCceeEEeec-CCHHHHHHHHHHHcc-CCCEEE-ecCC
Q psy7344 114 MCGHSLMFCG-NDSKNLTEAAKLAEP-HCDGID-INIG 148 (240)
Q Consensus 114 ~~pvivqi~g-~d~~~~~~aa~~le~-~~d~Id-in~g 148 (240)
..|++++-+- .+++++..+++.+.. |.+-|. +.||
T Consensus 134 gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg 171 (285)
T 3sz8_A 134 GKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERG 171 (285)
T ss_dssp SSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECC
T ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 5799999765 388999999998855 544333 3455
No 433
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=50.15 E-value=61 Score=28.35 Aligned_cols=29 Identities=7% Similarity=0.017 Sum_probs=14.8
Q ss_pred CeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 193 DINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 193 ~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
.+||..-..+.+..++.+.++. .+|.|.+
T Consensus 245 ~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 274 (383)
T 3i4k_A 245 NVSVMADESVWTPAEALAVVKAQAADVIAL 274 (383)
T ss_dssp CCEEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred CCCEEecCccCCHHHHHHHHHcCCCCEEEE
Confidence 3455554444444455555555 4555555
No 434
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=49.97 E-value=17 Score=31.40 Aligned_cols=64 Identities=2% Similarity=-0.098 Sum_probs=38.5
Q ss_pred HHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHH
Q psy7344 130 TEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYG 209 (240)
Q Consensus 130 ~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~ 209 (240)
.++.+.++.|+|.|++--. +|+.+++.++.+... ..+-+|.-+..++..+
T Consensus 220 de~~eAl~aGaD~I~LDn~-----------------~~~~l~~av~~i~~~-----------v~ieaSGGI~~~~i~~-- 269 (298)
T 3gnn_A 220 DQLRTALAHGARSVLLDNF-----------------TLDMMRDAVRVTEGR-----------AVLEVSGGVNFDTVRA-- 269 (298)
T ss_dssp HHHHHHHHTTCEEEEEESC-----------------CHHHHHHHHHHHTTS-----------EEEEEESSCSTTTHHH--
T ss_pred HHHHHHHHcCCCEEEECCC-----------------CHHHHHHHHHHhCCC-----------CeEEEEcCCCHHHHHH--
Confidence 3455555568899988543 678888888876433 2222333333444434
Q ss_pred HHHhC-CCCeEEEeccc
Q psy7344 210 AYLQD-DWPLLTELGKM 225 (240)
Q Consensus 210 ~~l~~-G~~~itih~R~ 225 (240)
+.+ |+|.|.+-.=|
T Consensus 270 --~a~tGVD~isvG~lt 284 (298)
T 3gnn_A 270 --IAETGVDRISIGALT 284 (298)
T ss_dssp --HHHTTCSEEECGGGG
T ss_pred --HHHcCCCEEEECCee
Confidence 346 99999985444
No 435
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=49.91 E-value=38 Score=27.84 Aligned_cols=33 Identities=6% Similarity=-0.215 Sum_probs=22.6
Q ss_pred ceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCC
Q psy7344 116 GHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIG 148 (240)
Q Consensus 116 pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~g 148 (240)
++|+-.+--+.++...+++...+ |+|.|-..-|
T Consensus 117 KvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTG 150 (226)
T 1vcv_A 117 KVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTG 150 (226)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred eEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 34443333356778888888755 8999998876
No 436
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=49.67 E-value=86 Score=25.06 Aligned_cols=73 Identities=10% Similarity=-0.074 Sum_probs=41.7
Q ss_pred HHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEE-ee---e-
Q psy7344 128 NLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGC-PQ---M- 201 (240)
Q Consensus 128 ~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsv-K~---r- 201 (240)
++.++.+.+.+ |+++|++... + . ..-.+++.++++.+.+++. .+.++. -. +
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~--~-------~--~~~~~~~~~~~~~~~l~~~------------gl~i~~~~~~~~~~ 87 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDF--H-------L--PLNSTDEQIRAFHDKCAAH------------KVTGYAVGPIYMKS 87 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTT--T-------S--CTTCCHHHHHHHHHHHHHT------------TCEEEEEEEEEECS
T ss_pred CHHHHHHHHHHhCCCEEEEecc--c-------C--CCCCCHHHHHHHHHHHHHc------------CCeEEEEeccccCC
Confidence 44556666544 8899998654 1 0 0113566667777766663 222211 11 1
Q ss_pred hhcHHHHHHHHhC-CCCeEEEec
Q psy7344 202 VAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 202 ~~~~~~~~~~l~~-G~~~itih~ 223 (240)
++...+.++.+.. |++.|.+|.
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~~p 110 (257)
T 3lmz_A 88 EEEIDRAFDYAKRVGVKLIVGVP 110 (257)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEecC
Confidence 3455666777777 888888874
No 437
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=49.55 E-value=36 Score=28.99 Aligned_cols=23 Identities=0% Similarity=-0.346 Sum_probs=18.7
Q ss_pred hcHHHHHHHHhC-CCCeEEEeccc
Q psy7344 203 AKRGHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 203 ~~~~~~~~~l~~-G~~~itih~R~ 225 (240)
+..++-++++++ ||+.|.+.+-.
T Consensus 179 ~~~i~rA~a~~eAGA~~ivlE~vp 202 (281)
T 1oy0_A 179 EQTIADAIAVAEAGAFAVVMEMVP 202 (281)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCC
T ss_pred HHHHHHHHHHHHcCCcEEEEecCC
Confidence 456778888999 99999998744
No 438
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=49.37 E-value=69 Score=28.16 Aligned_cols=77 Identities=10% Similarity=-0.035 Sum_probs=39.0
Q ss_pred CceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.++.+..- +-+.++..+.++.+++ +.+.||=-+ | ..|++..+++.+. +
T Consensus 221 ~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEqP~--~-------------~~d~~~~~~l~~~---------------~ 270 (398)
T 2pp0_A 221 FPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEPL--D-------------AYDIEGHAQLAAA---------------L 270 (398)
T ss_dssp SCEEEECTTCSCHHHHHHHHHHHGGGTCSCEECCS--C-------------TTCHHHHHHHHHH---------------C
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHcCCceeeCCC--C-------------hhhHHHHHHHHhh---------------C
Confidence 44544432 2256666666666655 455554211 1 1366666666554 3
Q ss_pred CeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 193 DINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 193 ~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
++||..-.++.+..++.+.++. .+|.|.+
T Consensus 271 ~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 300 (398)
T 2pp0_A 271 DTPIATGEMLTSFREHEQLILGNASDFVQP 300 (398)
T ss_dssp SSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 4455555554444555555555 5555544
No 439
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=49.20 E-value=35 Score=29.02 Aligned_cols=68 Identities=9% Similarity=-0.072 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeE------
Q psy7344 125 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIG------ 197 (240)
Q Consensus 125 d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvs------ 197 (240)
++++..+.+..+.+ |+++|.|--| +...+.++++.++ .+||.
T Consensus 93 s~~~a~~na~rl~kaGa~aVklEdg-------------------~e~~~~I~al~~a------------gIpV~gHiGLt 141 (275)
T 1o66_A 93 SKEQAFAAAAELMAAGAHMVKLEGG-------------------VWMAETTEFLQMR------------GIPVCAHIGLT 141 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECS-------------------GGGHHHHHHHHHT------------TCCEEEEEESC
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCc-------------------HHHHHHHHHHHHc------------CCCeEeeeccC
Q ss_pred ---------Eeee-----hhcHHHHHHHHhC-CCCeEEEec
Q psy7344 198 ---------CPQM-----VAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 198 ---------vK~r-----~~~~~~~~~~l~~-G~~~itih~ 223 (240)
.|+. .+.+++-++++++ ||+.|.+.+
T Consensus 142 PQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (275)
T 1o66_A 142 PQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMEC 182 (275)
T ss_dssp GGGTTC-----------CHHHHHHHHHHHHHTTCSEEEEES
T ss_pred ceeecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEec
No 440
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=49.07 E-value=13 Score=31.46 Aligned_cols=45 Identities=13% Similarity=-0.006 Sum_probs=34.1
Q ss_pred CChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCC
Q psy7344 98 DDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIG 148 (240)
Q Consensus 98 ~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~g 148 (240)
.++++|+.++... +.|||+- +.+.+..++++.++.|+|+|-+|-+
T Consensus 174 ~~~~lI~~I~e~~---~vPVI~e---GGI~TPsDAa~AmeLGAdgVlVgSA 218 (265)
T 1wv2_A 174 CNPYNLRIILEEA---KVPVLVD---AGVGTASDAAIAMELGCEAVLMNTA 218 (265)
T ss_dssp SCHHHHHHHHHHC---SSCBEEE---SCCCSHHHHHHHHHHTCSEEEESHH
T ss_pred CCHHHHHHHHhcC---CCCEEEe---CCCCCHHHHHHHHHcCCCEEEEChH
Confidence 3589998887642 4787763 5666666888888889999999866
No 441
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=48.71 E-value=37 Score=29.07 Aligned_cols=45 Identities=9% Similarity=-0.041 Sum_probs=28.5
Q ss_pred cCCHHHHHHHHHHhhhccccccCCCCCCCCeeeE--EeeehhcHHHHHHHHhCCCCeEEEecc
Q psy7344 164 QDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIG--CPQMVAKRGHYGAYLQDDWPLLTELGK 224 (240)
Q Consensus 164 ~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvs--vK~r~~~~~~~~~~l~~G~~~itih~R 224 (240)
..+++++.++.+. .++|+. +-..+.+..++.+.+..|++++.+ |+
T Consensus 193 ~~~~~ll~~i~~~---------------~~iPVivvA~GGI~t~~dv~~~~~~GAdgVlV-Gs 239 (297)
T 4adt_A 193 RAPIDLILLTRKL---------------KRLPVVNFAAGGIATPADAAMCMQLGMDGVFV-GS 239 (297)
T ss_dssp TCCHHHHHHHHHH---------------TSCSSEEEEESCCCSHHHHHHHHHTTCSCEEE-SH
T ss_pred CCCHHHHHHHHHh---------------cCCCeEEEecCCCCCHHHHHHHHHcCCCEEEE-hH
Confidence 4567777776654 345654 334465666666665559999988 54
No 442
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=48.65 E-value=9 Score=32.36 Aligned_cols=24 Identities=4% Similarity=-0.222 Sum_probs=20.9
Q ss_pred hhcHHHHHHHHhC-CCCeEEEecccc
Q psy7344 202 VAKRGHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 202 ~~~~~~~~~~l~~-G~~~itih~R~~ 226 (240)
+.+.++.+...+. | |+||+|.|--
T Consensus 24 ~Pdpv~aA~~ae~aG-dgITvHlReD 48 (260)
T 3o6c_A 24 DPDLLEAAFIVARHG-DQITLHVRED 48 (260)
T ss_dssp CSCHHHHHHHHHHHS-SEEEEECCTT
T ss_pred CCCHHHHHHHHHHhC-CeEEEeeCCC
Confidence 4588899999999 9 9999999963
No 443
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=48.52 E-value=74 Score=27.44 Aligned_cols=86 Identities=8% Similarity=-0.071 Sum_probs=49.9
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
.++++-+--.+.++..++++.+...++.+.+|.- .- . ..-++.++++.+..+.. +.
T Consensus 84 ~~LiVALD~~~~~~al~l~~~l~~~v~~vKvG~~--l~----~------~~G~~~v~~L~~~a~~~------------g~ 139 (312)
T 3g3d_A 84 TNLCLSADVSLARELLQLADALGPSICMLKTHVD--IL----N------DFTLDVMKELITLAKCH------------EF 139 (312)
T ss_dssp CCEEEECCCSCHHHHHHHHHHHGGGCSEEEECGG--GC----T------TCCHHHHHHHHHHHHHH------------TC
T ss_pred CCEEEEeCCCCHHHHHHHHHHhCCCceEEEEcHH--HH----H------HhCHHHHHHHHHHHhhC------------CC
Confidence 5677776556777777777777766777777654 11 0 12356666665543221 33
Q ss_pred eeE--Eeee-hhcHHHH-HH-HHh--C-CCCeEEEecc
Q psy7344 195 NIG--CPQM-VAKRGHY-GA-YLQ--D-DWPLLTELGK 224 (240)
Q Consensus 195 pvs--vK~r-~~~~~~~-~~-~l~--~-G~~~itih~R 224 (240)
+|+ .|+- +.+|... .+ .+. . |+|.+|+|+=
T Consensus 140 ~IflDlK~~DIpnTv~~a~~~a~~~~a~~aD~vTVHa~ 177 (312)
T 3g3d_A 140 LIFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVV 177 (312)
T ss_dssp EEEEEEEECSCHHHHHHHHHCTTTCHHHHCSEEEEEST
T ss_pred EEEEECcccccHHHHHHHHHHHHHhhhccCCEEEEccC
Confidence 555 4444 5556442 21 222 2 7999999974
No 444
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=48.47 E-value=49 Score=30.27 Aligned_cols=91 Identities=10% Similarity=-0.059 Sum_probs=57.0
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccc--cCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYL--QDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l--~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.+++.+| .+++-...+-+.++. .||||+.+| . .|..+ -.=|..-++|++..+.+
T Consensus 225 ~~iiaKI--E~~eav~nldeIl~~-sDgImVaRG---D------Lgvei~~e~v~~~Qk~ii~~~~~~------------ 280 (461)
T 3qtg_A 225 SQVAVKI--ETKGAVNNLEELVQC-SDYVVVARG---D------LGLHYGLDALPIVQRRIVHTSLKY------------ 280 (461)
T ss_dssp CEEEEEE--CSHHHHHTHHHHHHT-CSEEEEEHH---H------HTTTSCTTTHHHHHHHHHHHHHHT------------
T ss_pred ceEEEEE--CCHHHHHhHHHHHHh-cccEEEccc---c------ccccCCHHHHHHHHHHHHHHHHHh------------
Confidence 5678887 444444444444433 799999877 1 12222 23355667788877765
Q ss_pred CeeeEEeee-h-----------hcHHHHHHHHhCCCCeEEEeccccccc
Q psy7344 193 DINIGCPQM-V-----------AKRGHYGAYLQDDWPLLTELGKMAMLV 229 (240)
Q Consensus 193 ~~pvsvK~r-~-----------~~~~~~~~~l~~G~~~itih~R~~~~~ 229 (240)
..|+.+=+. + ...-|.+.++.+|+|++.+-|-|..-.
T Consensus 281 gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G~ 329 (461)
T 3qtg_A 281 GKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASGK 329 (461)
T ss_dssp TCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTSS
T ss_pred CCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCCC
Confidence 457766433 2 134577888888999999987776544
No 445
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=48.14 E-value=30 Score=30.46 Aligned_cols=69 Identities=13% Similarity=0.067 Sum_probs=39.4
Q ss_pred cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-hhcH-HHHHHHHh-C
Q psy7344 138 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-VAKR-GHYGAYLQ-D 214 (240)
Q Consensus 138 ~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-~~~~-~~~~~~l~-~ 214 (240)
+.++.+.++..- - ..+|.. -+..++++++.+++. +..+=.-.|.- +.+| ..+++.+. .
T Consensus 127 ~~v~~vKvg~~l--f----ea~G~~---gi~~L~~~v~~lr~~----------g~~VflDlK~~DIgnTva~ya~a~~~~ 187 (353)
T 2ffc_A 127 EYALAYKMNFAF--Y----LPYGSL---GVDVLKNVFDYLHHL----------NVPTILDIKMNDIGNTVKHYRKFIFDY 187 (353)
T ss_dssp GGCSEEEEEGGG--G----STTTHH---HHHHHHHHHHHHHHH----------TCCEEEEEEECCCHHHHHHHHHHHHTT
T ss_pred cccceeeccHHH--H----HhcCHH---HHHHHHHHHHHHHHc----------CCcEEEEEecCchHHHHHHHHHHHHHH
Confidence 346677776551 1 122322 234566667777763 02233345555 5455 56777764 7
Q ss_pred -CCCeEEEeccc
Q psy7344 215 -DWPLLTELGKM 225 (240)
Q Consensus 215 -G~~~itih~R~ 225 (240)
|+|++|+|+=.
T Consensus 188 lgaD~vTVhp~~ 199 (353)
T 2ffc_A 188 LRSDSCTANIYM 199 (353)
T ss_dssp SCCSEEEECCTT
T ss_pred cCCCEEEEeCCC
Confidence 99999999754
No 446
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=48.12 E-value=30 Score=29.62 Aligned_cols=50 Identities=6% Similarity=-0.079 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCC--HHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee
Q psy7344 126 SKNLTEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDD--WPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM 201 (240)
Q Consensus 126 ~~~~~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~--p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r 201 (240)
+++..+.++.+. .|.|+|+|+ + .... .+.+.++++++++. +++|+..|.-
T Consensus 52 ~~~~~~~~~~~~~sGtDai~VG-S--------------~~vt~~~~~~~~~v~~ik~~-----------~~lPvil~fP 104 (286)
T 3vk5_A 52 VTEAVEKAAELTRLGFAAVLLA-S--------------TDYESFESHMEPYVAAVKAA-----------TPLPVVLHFP 104 (286)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEE-C--------------SCCSSHHHHHHHHHHHHHHH-----------CSSCEEEECC
T ss_pred cHHHHHHHHHHHhcCCCEEEEc-c--------------CCCCcchHHHHHHHHHHHHh-----------CCCCEEEECC
Confidence 344444566554 489999998 6 2235 67888999999996 5677777443
No 447
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=48.05 E-value=77 Score=27.79 Aligned_cols=78 Identities=10% Similarity=0.080 Sum_probs=44.4
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+-.- +-+.++..+.++.+++ +.+.||= |.. ..|++..+++.+.
T Consensus 215 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~----P~~-----------~~~~~~~~~l~~~--------------- 264 (407)
T 2o56_A 215 DVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEE----PVM-----------PLNPAQMKQVADK--------------- 264 (407)
T ss_dssp TSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC----SSC-----------SSSHHHHHHHHHH---------------
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC----CCC-----------hhhHHHHHHHHHh---------------
Confidence 455665542 2378888888888877 5677763 211 1467776666654
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+++||..-.++.+..++.+.+++ .+|.|.+
T Consensus 265 ~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 295 (407)
T 2o56_A 265 VNIPLAAGERIYWRWGYRPFLENGSLSVIQP 295 (407)
T ss_dssp CCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred CCCCEEeCCCcCCHHHHHHHHHcCCCCEEec
Confidence 34455554444444444445555 4555444
No 448
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=47.91 E-value=31 Score=29.55 Aligned_cols=78 Identities=12% Similarity=0.008 Sum_probs=46.2
Q ss_pred HHHHcc-CCCEEEecC-CCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--h---hcH
Q psy7344 133 AKLAEP-HCDGIDINI-GCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM--V---AKR 205 (240)
Q Consensus 133 a~~le~-~~d~Idin~-gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r--~---~~~ 205 (240)
|+++++ |+++|-++- ++- . . .|+-.......+.+-.-++.+..+ +++||++-+. + .+.
T Consensus 32 A~~~~~aG~~ai~vsg~~~a-~--~-lG~pD~~~vt~~em~~~~~~I~~~-----------~~~PviaD~d~Gyg~~~~v 96 (295)
T 1s2w_A 32 ARIVQEAGFKGIWGSGLSVS-A--Q-LGVRDSNEASWTQVVEVLEFMSDA-----------SDVPILLDADTGYGNFNNA 96 (295)
T ss_dssp HHHHHHHTCSCEEECCHHHH-H--T-C---------CHHHHHHHHHHHHT-----------CSSCEEEECCSSCSSHHHH
T ss_pred HHHHHHcCCCEEEeChHHHH-H--h-CCCCCCCCCCHHHHHHHHHHHHhc-----------CCCCEEecCCCCCCCHHHH
Confidence 445544 788888863 322 1 1 222222234455555556666666 6889999888 3 345
Q ss_pred HHHHHHHhC-CCCeEEEeccc
Q psy7344 206 GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 206 ~~~~~~l~~-G~~~itih~R~ 225 (240)
.+.++.+++ |+++|.|-+-+
T Consensus 97 ~~~v~~l~~aGaagv~iED~~ 117 (295)
T 1s2w_A 97 RRLVRKLEDRGVAGACLEDKL 117 (295)
T ss_dssp HHHHHHHHHTTCCEEEEECBC
T ss_pred HHHHHHHHHcCCcEEEECCCC
Confidence 667788889 99999997765
No 449
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=47.65 E-value=1e+02 Score=27.51 Aligned_cols=97 Identities=12% Similarity=0.128 Sum_probs=53.5
Q ss_pred CceeEEeecCCHHHHHHHH-HHHccCCCEEEecCCCchhhhh---cccccc--------cccCC--------HHHHHHHH
Q psy7344 115 CGHSLMFCGNDSKNLTEAA-KLAEPHCDGIDINIGCPQMVAK---RGHYGA--------YLQDD--------WPLLTNLV 174 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa-~~le~~~d~Idin~gCP~~~~~---~~g~G~--------~l~~~--------p~~i~~iv 174 (240)
.|+...+.+.+++++.+.+ +.+++|+..+-+..|-|..... ..+.+. .+..+ -+...+++
T Consensus 139 v~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v 218 (426)
T 4e4f_A 139 VMVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLF 218 (426)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHH
T ss_pred eeEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence 4555555566787766544 4557799999998886542110 000000 00000 12234677
Q ss_pred HHhhhccccccCCCCCCCCeeeEEeee----hhcHHHHHHHHhC-CCCeEE
Q psy7344 175 YSPNMVHFVIAEPHCDGNDINIGCPQM----VAKRGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 175 ~~~~~~~~~i~~~~~~~~~~pvsvK~r----~~~~~~~~~~l~~-G~~~it 220 (240)
+++++++ +.++++.+... .++..++++.|++ |+++|-
T Consensus 219 ~avR~a~---------G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 260 (426)
T 4e4f_A 219 EAVRDKF---------GFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME 260 (426)
T ss_dssp HHHHHHH---------TTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE
T ss_pred HHHHHHh---------CCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE
Confidence 7777763 13567766555 3567889999999 999873
No 450
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=47.08 E-value=38 Score=29.03 Aligned_cols=80 Identities=6% Similarity=-0.137 Sum_probs=52.2
Q ss_pred HHHHcc-CCCEEEecC-CCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--h---hcH
Q psy7344 133 AKLAEP-HCDGIDINI-GCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM--V---AKR 205 (240)
Q Consensus 133 a~~le~-~~d~Idin~-gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r--~---~~~ 205 (240)
|+++++ |+++|-++- +.- . ...|+-...+...+.+-..++.+..+ +++||++-+. + .+.
T Consensus 35 A~l~e~aGf~ai~vs~~s~a-~--~~~G~pD~~~vt~~em~~~~~~I~r~-----------~~~PviaD~d~Gyg~~~~v 100 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVA-A--NSLGIPDLGISTMDDVLVDANRITNA-----------TNLPLLVDIDTGWGGAFNI 100 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHH-H--HTTCCCSSSCCCHHHHHHHHHHHHHH-----------CCSCEEEECTTCSSSHHHH
T ss_pred HHHHHHcCCCEEEECcHHHH-H--HhcCCCCCCCCCHHHHHHHHHHHHhh-----------cCCeEEEECCCCCCCHHHH
Confidence 444544 788888764 211 1 12233333345677766677777666 6789999888 3 345
Q ss_pred HHHHHHHhC-CCCeEEEecccc
Q psy7344 206 GHYGAYLQD-DWPLLTELGKMA 226 (240)
Q Consensus 206 ~~~~~~l~~-G~~~itih~R~~ 226 (240)
.+.++.+++ |+++|.|-+-+.
T Consensus 101 ~~~v~~l~~aGaagv~iEDq~~ 122 (298)
T 3eoo_A 101 ARTIRSFIKAGVGAVHLEDQVG 122 (298)
T ss_dssp HHHHHHHHHTTCSEEEEECBCC
T ss_pred HHHHHHHHHhCCeEEEECCCCC
Confidence 667788889 999999988663
No 451
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=46.94 E-value=38 Score=28.99 Aligned_cols=80 Identities=9% Similarity=-0.139 Sum_probs=53.4
Q ss_pred HHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--h----hcH
Q psy7344 133 AKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM--V----AKR 205 (240)
Q Consensus 133 a~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r--~----~~~ 205 (240)
|+++++ |+++|-++-+.-.. ...|+-...+...+.+-..++.+..+ +++||++-+. + .+.
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~--~~~G~pD~~~vt~~em~~~~~~I~~~-----------~~~PviaD~d~Gyg~~~~~~ 96 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAA--GSLGLPDLGISTLDDVLTDIRRITDV-----------CSLPLLVDADIGFGSSAFNV 96 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHH--TTTCCCSSSCSCHHHHHHHHHHHHHH-----------CCSCEEEECTTCSSSSHHHH
T ss_pred HHHHHHcCCCEEEECchHhhh--hhcCCCCCCCCCHHHHHHHHHHHHhh-----------CCCCEEecCCcccCCCHHHH
Confidence 455554 78888775441111 12234333456777777777777777 6789999886 3 345
Q ss_pred HHHHHHHhC-CCCeEEEeccc
Q psy7344 206 GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 206 ~~~~~~l~~-G~~~itih~R~ 225 (240)
.+.++.+++ |+++|.|-+-.
T Consensus 97 ~~~v~~l~~aGa~gv~iEd~~ 117 (295)
T 1xg4_A 97 ARTVKSMIKAGAAGLHIEDQV 117 (295)
T ss_dssp HHHHHHHHHHTCSEEEEECBC
T ss_pred HHHHHHHHHcCCeEEEECCCC
Confidence 677888889 99999997765
No 452
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=46.81 E-value=33 Score=29.23 Aligned_cols=70 Identities=14% Similarity=0.125 Sum_probs=42.5
Q ss_pred HHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHH---HHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh---
Q psy7344 129 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP---LLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV--- 202 (240)
Q Consensus 129 ~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~---~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~--- 202 (240)
..++...++.|+|.||+-.- .|..+..+|+ .+.+-+++++++. .+ ..+|.-+
T Consensus 109 v~E~~~Av~~GAdEIDmVin----------ig~lksg~~~~~~~v~~eI~~v~~a~----------~~--~~lKVIlEt~ 166 (281)
T 2a4a_A 109 LNDTEKALDDGADEIDLVIN----------YKKIIENTDEGLKEATKLTQSVKKLL----------TN--KILKVIIEVG 166 (281)
T ss_dssp HHHHHHHHHHTCSEEEEECC----------HHHHHHSHHHHHHHHHHHHHHHHTTC----------TT--SEEEEECCHH
T ss_pred HHHHHHHHHcCCCEEEEecc----------hHhhhCCChhHHHHHHHHHHHHHHHh----------cC--CceEEEEecc
Confidence 44556667789999995332 1111235788 7777777777761 12 3445442
Q ss_pred --h--c-HHHHHHHHhC-CCCeEE
Q psy7344 203 --A--K-RGHYGAYLQD-DWPLLT 220 (240)
Q Consensus 203 --~--~-~~~~~~~l~~-G~~~it 220 (240)
. . ....++...+ |+|+|-
T Consensus 167 ~L~d~e~i~~A~~ia~eaGADfVK 190 (281)
T 2a4a_A 167 ELKTEDLIIKTTLAVLNGNADFIK 190 (281)
T ss_dssp HHCSHHHHHHHHHHHHTTTCSEEE
T ss_pred cCCcHHHHHHHHHHHHHhCCCEEE
Confidence 2 2 3467777888 999985
No 453
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=46.77 E-value=93 Score=26.34 Aligned_cols=80 Identities=11% Similarity=-0.135 Sum_probs=49.9
Q ss_pred HHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh------hc
Q psy7344 132 AAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV------AK 204 (240)
Q Consensus 132 aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~------~~ 204 (240)
.|+++++ |+|.|-++-+- . +...|+-..+.-..+.+-.-++++..+. .+.||++-+-+ ++
T Consensus 41 sA~l~e~aG~d~ilvGdSl-~--~~~lG~~dt~~vtldem~~h~~aV~r~~----------~~~~vvaD~pfgsY~s~~~ 107 (275)
T 3vav_A 41 FAALLDRANVDVQLIGDSL-G--NVLQGQTTTLPVTLDDIAYHTACVARAQ----------PRALIVADLPFGTYGTPAD 107 (275)
T ss_dssp HHHHHHHTTCSEEEECTTH-H--HHTTCCSSSTTCCHHHHHHHHHHHHHTC----------CSSEEEEECCTTSCSSHHH
T ss_pred HHHHHHHcCCCEEEECcHH-H--HHHcCCCCCCccCHHHHHHHHHHHHhcC----------CCCCEEEecCCCCCCCHHH
Confidence 4566665 79999776552 1 1223444444556666666666666651 24678887773 23
Q ss_pred HHHHHHHHhC-CCCeEEEecc
Q psy7344 205 RGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 205 ~~~~~~~l~~-G~~~itih~R 224 (240)
..+.+..+.+ |+++|.|-+-
T Consensus 108 a~~~a~rl~kaGa~aVklEdg 128 (275)
T 3vav_A 108 AFASAVKLMRAGAQMVKFEGG 128 (275)
T ss_dssp HHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECCc
Confidence 4555667777 9999998764
No 454
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=46.64 E-value=33 Score=29.25 Aligned_cols=81 Identities=7% Similarity=-0.098 Sum_probs=53.3
Q ss_pred HHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--h---hcH
Q psy7344 132 AAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM--V---AKR 205 (240)
Q Consensus 132 aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r--~---~~~ 205 (240)
.|+++++ |+++|-++-++-.. +. .|+-...+-..+.+...++.+..+ +++||++-+. + .+.
T Consensus 33 sA~i~e~aGf~ai~vs~s~~a~-~~-lG~pD~~~vt~~em~~~~~~I~r~-----------~~~PviaD~d~Gyg~~~~~ 99 (287)
T 3b8i_A 33 SARIAADLGFECGILGGSVASL-QV-LAAPDFALITLSEFVEQATRIGRV-----------ARLPVIADADHGYGNALNV 99 (287)
T ss_dssp HHHHHHHTTCSCEEECHHHHHH-HH-HSCCSSSCSCHHHHHHHHHHHHTT-----------CSSCEEEECTTCSSSHHHH
T ss_pred HHHHHHHcCCCEEEeCcHHHHH-Hh-cCCCCCCCCCHHHHHHHHHHHHhc-----------CCCCEEEECCCCCCCHHHH
Confidence 3455554 78888775442111 11 233333456777777777777776 7889998887 3 345
Q ss_pred HHHHHHHhC-CCCeEEEeccc
Q psy7344 206 GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 206 ~~~~~~l~~-G~~~itih~R~ 225 (240)
.+.++.+++ |+++|.|-+-+
T Consensus 100 ~~~v~~l~~aGa~gv~iED~~ 120 (287)
T 3b8i_A 100 MRTVVELERAGIAALTIEDTL 120 (287)
T ss_dssp HHHHHHHHHHTCSEEEEECBC
T ss_pred HHHHHHHHHhCCeEEEEcCCC
Confidence 677888889 99999997765
No 455
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=46.63 E-value=65 Score=27.13 Aligned_cols=72 Identities=8% Similarity=-0.128 Sum_probs=43.7
Q ss_pred HHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHH
Q psy7344 128 NLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRG 206 (240)
Q Consensus 128 ~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~ 206 (240)
+..+.|+..++ |+++|-+.-= ..- +...++.+..+.+ . +++||..|.=+.+..
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd-------~~~----f~Gs~~~L~~ir~----~-----------v~lPVl~Kdfi~d~~ 133 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTD-------TPS----FQGAPEFLTAARQ----A-----------CSLPALRKDFLFDPY 133 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECC-------STT----TCCCHHHHHHHHH----T-----------SSSCEEEESCCCSTH
T ss_pred CHHHHHHHHHHCCCCEEEEecc-------ccc----cCCCHHHHHHHHH----h-----------cCCCEEECCccCCHH
Confidence 45567777765 6888854221 111 2246666655543 4 678998887555555
Q ss_pred HHHHHHhCCCCeEEEeccc
Q psy7344 207 HYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 207 ~~~~~l~~G~~~itih~R~ 225 (240)
++.+....|||.|.+....
T Consensus 134 qi~ea~~~GAD~VlLi~a~ 152 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMAS 152 (272)
T ss_dssp HHHHHHHTTCSEEEEETTT
T ss_pred HHHHHHHcCCCEEEEcccc
Confidence 5555444499998886654
No 456
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=46.38 E-value=1e+02 Score=24.60 Aligned_cols=21 Identities=14% Similarity=-0.235 Sum_probs=15.4
Q ss_pred cHHHHHHHHhC-CCCeEEEecc
Q psy7344 204 KRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 204 ~~~~~~~~l~~-G~~~itih~R 224 (240)
...+.++.+.. |++.|.+|+-
T Consensus 86 ~~~~~i~~a~~lG~~~v~~~~g 107 (272)
T 2q02_A 86 KTEGLLRDAQGVGARALVLCPL 107 (272)
T ss_dssp HHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCEEEEccC
Confidence 34566667778 9999998864
No 457
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=46.28 E-value=31 Score=28.67 Aligned_cols=69 Identities=7% Similarity=-0.007 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
+.++...+++...+ |+|.|..+-|- ...| ..++.++.+.+.+.. ++-+|.-
T Consensus 155 t~eei~~a~~ia~~aGADfVKTSTGf-------~~gg----At~~dv~lmr~~vg~---------------~v~VKasGG 208 (239)
T 3ngj_A 155 TNEEKVEVCKRCVAAGAEYVKTSTGF-------GTHG----ATPEDVKLMKDTVGD---------------KALVKAAGG 208 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSS-------SSCC----CCHHHHHHHHHHHGG---------------GSEEEEESS
T ss_pred CHHHHHHHHHHHHHHCcCEEECCCCC-------CCCC----CCHHHHHHHHHhhCC---------------CceEEEeCC
Confidence 66677788887755 89999998772 1112 466666555554322 3445554
Q ss_pred hhcHHHHHHHHhCCCCeE
Q psy7344 202 VAKRGHYGAYLQDDWPLL 219 (240)
Q Consensus 202 ~~~~~~~~~~l~~G~~~i 219 (240)
+.+..+..++++.|++.|
T Consensus 209 Irt~~da~~~i~aGA~ri 226 (239)
T 3ngj_A 209 IRTFDDAMKMINNGASRI 226 (239)
T ss_dssp CCSHHHHHHHHHTTEEEE
T ss_pred CCCHHHHHHHHHhcccce
Confidence 666777777776688855
No 458
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=46.16 E-value=67 Score=27.74 Aligned_cols=30 Identities=3% Similarity=-0.066 Sum_probs=14.6
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+.+||..-..+.+..++.+.++. .+|.|.+
T Consensus 233 ~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 263 (354)
T 3jva_A 233 VNTTIMADESCFDAQDALELVKKGTVDVINI 263 (354)
T ss_dssp CSSEEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE
Confidence 34455554444444444444444 4555544
No 459
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=45.85 E-value=1.1e+02 Score=27.80 Aligned_cols=35 Identities=11% Similarity=-0.123 Sum_probs=25.6
Q ss_pred CceeEEeec--CCHHHHHHHHHHHcc-CCCEEEecCCC
Q psy7344 115 CGHSLMFCG--NDSKNLTEAAKLAEP-HCDGIDINIGC 149 (240)
Q Consensus 115 ~pvivqi~g--~d~~~~~~aa~~le~-~~d~Idin~gC 149 (240)
.|+++-+-+ +++....+.++.+++ |+.||.|-=..
T Consensus 153 lPviaD~DtGyG~~~~v~~tv~~~~~aGaaGi~IEDq~ 190 (435)
T 3lg3_A 153 LPIVADAEAGFGGVLNAFELMKAMIEAGAAGVHFEDQL 190 (435)
T ss_dssp CCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEESBC
T ss_pred CCeEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEecCC
Confidence 789988743 466667777777765 89999887654
No 460
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=45.72 E-value=80 Score=28.26 Aligned_cols=78 Identities=9% Similarity=0.081 Sum_probs=45.6
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+-.- +-++++..++++.+++ +.+.||= |.. ..|++.++++.+.
T Consensus 203 d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEe----P~~-----------~~~~~~~~~l~~~--------------- 252 (433)
T 3rcy_A 203 KADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEE----PVP-----------PDNVGAMAQVARA--------------- 252 (433)
T ss_dssp SSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC----CSC-----------TTCHHHHHHHHHH---------------
T ss_pred CCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEEC----CCC-----------hhhHHHHHHHHhc---------------
Confidence 345555442 2378888888888877 5777773 211 1366666666554
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+.+||..-.++.+..++.+.++. .+|.|.+
T Consensus 253 ~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~ 283 (433)
T 3rcy_A 253 VRIPVATGERLTTKAEFAPVLREGAAAILQP 283 (433)
T ss_dssp SSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred cCCCEEecCCCCCHHHHHHHHHcCCCCEEEe
Confidence 45566665555555555555555 5555544
No 461
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=45.64 E-value=92 Score=27.25 Aligned_cols=30 Identities=7% Similarity=-0.032 Sum_probs=16.5
Q ss_pred CceeEEee-cCCHHHHHHHHHHHcc-CCCEEE
Q psy7344 115 CGHSLMFC-GNDSKNLTEAAKLAEP-HCDGID 144 (240)
Q Consensus 115 ~pvivqi~-g~d~~~~~~aa~~le~-~~d~Id 144 (240)
.++.+..- +-+.++..+.++.+++ +.+.||
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE 221 (397)
T 2qde_A 190 VDLFIDINGAWTYDQALTTIRALEKYNLSKIE 221 (397)
T ss_dssp SCEEEECTTCCCHHHHHHHHHHHGGGCCSCEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhCCCCEEE
Confidence 44544431 2366666666666665 455555
No 462
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=45.42 E-value=68 Score=28.19 Aligned_cols=30 Identities=10% Similarity=0.151 Sum_probs=19.1
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+.+||..-.++.+..++.+.++. .+|.|.+
T Consensus 251 ~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 281 (394)
T 3mqt_A 251 INTRLCGAEMSTTRFEAQEWLEKTGISVVQS 281 (394)
T ss_dssp SSSEEEECTTCCHHHHHHHHHHHHCCSEECC
T ss_pred CCCCEEeCCCcCCHHHHHHHHHcCCCCeEec
Confidence 45677776665555666666666 6666655
No 463
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=45.40 E-value=51 Score=28.96 Aligned_cols=30 Identities=13% Similarity=0.353 Sum_probs=21.6
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+.+||..-.++.+..++.+.++. .+|.|.+
T Consensus 246 ~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~i 276 (389)
T 3ozy_A 246 TPVRIATGENLYTRNAFNDYIRNDAIDVLQA 276 (389)
T ss_dssp CSSEEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred CCCCEEeCCCCCCHHHHHHHHHcCCCCEEEe
Confidence 56788877776666677777777 7777765
No 464
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=45.37 E-value=42 Score=29.09 Aligned_cols=80 Identities=4% Similarity=-0.205 Sum_probs=53.5
Q ss_pred HHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC-CeeeEEeee--h---hcH
Q psy7344 133 AKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN-DINIGCPQM--V---AKR 205 (240)
Q Consensus 133 a~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~-~~pvsvK~r--~---~~~ 205 (240)
|+++++ |+|+|-++-+.-.. ...|+-...+-..+.+...++.+..+ + ++||++-+. + .+.
T Consensus 52 A~i~e~aGfdai~vs~~~~a~--~~lG~pD~~~vt~~em~~~~~~I~r~-----------~~~~PviaD~d~Gyg~~~~v 118 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSA--AMLGLPDFGLLTTTEVVEATRRITAA-----------APNLCVVVDGDTGGGGPLNV 118 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHH--HHHCCCSSSCSCHHHHHHHHHHHHHH-----------SSSSEEEEECTTCSSSHHHH
T ss_pred HHHHHHcCCCEEEECcHHHhh--HhcCCCCCCCCCHHHHHHHHHHHHhh-----------ccCCCEEEeCCCCCCCHHHH
Confidence 455554 78999886531111 11233333456677777777777777 5 889999888 3 345
Q ss_pred HHHHHHHhC-CCCeEEEeccc
Q psy7344 206 GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 206 ~~~~~~l~~-G~~~itih~R~ 225 (240)
.+.++.+++ |+++|.|-+-.
T Consensus 119 ~~tv~~l~~aGaagv~iED~~ 139 (318)
T 1zlp_A 119 QRFIRELISAGAKGVFLEDQV 139 (318)
T ss_dssp HHHHHHHHHTTCCEEEEECBC
T ss_pred HHHHHHHHHcCCcEEEECCCC
Confidence 677888889 99999997765
No 465
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=45.35 E-value=66 Score=28.29 Aligned_cols=31 Identities=10% Similarity=-0.150 Sum_probs=20.8
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEE
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGID 144 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Id 144 (240)
+.++.+..- +-++++..+.++.+++ +.+.||
T Consensus 218 d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE 250 (410)
T 2gl5_A 218 DADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYE 250 (410)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEE
Confidence 456666542 2378888888888877 456665
No 466
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=45.33 E-value=76 Score=27.91 Aligned_cols=30 Identities=17% Similarity=0.158 Sum_probs=18.6
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+++||..-.++.+..++.+.++. .+|.|.+
T Consensus 256 ~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 286 (394)
T 3mkc_A 256 TRSRICGAEMSTTRFEAEEWITKGKVHLLQS 286 (394)
T ss_dssp CSSCBEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred CCCCEEeCCCCCCHHHHHHHHHcCCCCeEec
Confidence 45677666665555566666666 5666655
No 467
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=45.08 E-value=58 Score=28.64 Aligned_cols=30 Identities=3% Similarity=-0.193 Sum_probs=16.6
Q ss_pred CceeEEee-cC--CHHHHHHHHHHHcc-CCCEEE
Q psy7344 115 CGHSLMFC-GN--DSKNLTEAAKLAEP-HCDGID 144 (240)
Q Consensus 115 ~pvivqi~-g~--d~~~~~~aa~~le~-~~d~Id 144 (240)
.++.+..- +- +.++..+.++.+++ +.+.||
T Consensus 194 ~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iE 227 (401)
T 2hzg_A 194 GDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLE 227 (401)
T ss_dssp SEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEE
T ss_pred CeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 45555442 23 56666666666655 456665
No 468
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=44.20 E-value=76 Score=27.72 Aligned_cols=48 Identities=8% Similarity=-0.092 Sum_probs=29.4
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
+.++.+..- +-++++..+.++.+++ +.+.||= |.. ..|++..+++.+.
T Consensus 199 d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~----P~~-----------~~~~~~~~~l~~~ 248 (392)
T 2poz_A 199 EIELMVDLSGGLTTDETIRFCRKIGELDICFVEE----PCD-----------PFDNGALKVISEQ 248 (392)
T ss_dssp TSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC----CSC-----------TTCHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC----CCC-----------cccHHHHHHHHhh
Confidence 456666542 2378888888888877 4566652 211 1467777666654
No 469
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=44.10 E-value=62 Score=25.90 Aligned_cols=141 Identities=9% Similarity=-0.012 Sum_probs=77.5
Q ss_pred CchhHHHHHHHhhcccCCCceeecccccccCCCccccccCchhhhhhhhcccce-ee-eCChhhHHHhhhcccCCCCcee
Q psy7344 41 DWPLLTELVVHFSWVSKNGPLFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGA-YL-QDDWPLLTELGFKTRSHMCGHS 118 (240)
Q Consensus 41 ~~~l~~~iv~ql~~~~~~~p~~vk~~~~lap~~~~~dl~~gC~~~i~~~g~~ga-~l-~~d~eli~~i~~~~~~~~~pvi 118 (240)
+-..+.++|.++. ....+++|..- ...+.. .-..+ ...+.. .++. ++ .....++...+.. ....+
T Consensus 39 ~i~~l~~~v~~lk--~~~K~v~Vh~D-li~Gls---~d~~a-i~fL~~--~~~pdGIIsTk~~~i~~Ak~~----gL~tI 105 (192)
T 3kts_A 39 HVAQLKALVKYAQ--AGGKKVLLHAD-LVNGLK---NDDYA-IDFLCT--EICPDGIISTRGNAIMKAKQH----KMLAI 105 (192)
T ss_dssp ETTTHHHHHHHHH--HTTCEEEEEGG-GEETCC---CSHHH-HHHHHH--TTCCSEEEESCHHHHHHHHHT----TCEEE
T ss_pred cHHHHHHHHHHHH--HcCCeEEEecC-chhccC---CcHHH-HHHHHh--CCCCCEEEeCcHHHHHHHHHC----CCeEE
Confidence 3455677777777 23446555321 111110 00111 123332 2333 22 4445666554322 12222
Q ss_pred EEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeE
Q psy7344 119 LMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIG 197 (240)
Q Consensus 119 vqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvs 197 (240)
--++--|...+....+.+++ ..|.|++=-| + -|+.++++.+ . +++|+.
T Consensus 106 qR~FliDS~al~~~~~~i~~~~PD~iEiLPG--------------i--~p~iI~~i~~----~-----------~~~PiI 154 (192)
T 3kts_A 106 QRLFMIDSSAYNKGVALIQKVQPDCIELLPG--------------I--IPEQVQKMTQ----K-----------LHIPVI 154 (192)
T ss_dssp EEEECCSHHHHHHHHHHHHHHCCSEEEEECT--------------T--CHHHHHHHHH----H-----------HCCCEE
T ss_pred EEEEEEEcchHHHHHHHHhhcCCCEEEECCc--------------h--hHHHHHHHHH----h-----------cCCCEE
Confidence 22334577777888888876 6899988533 2 2555555544 3 566888
Q ss_pred EeeehhcHHHHHHHHhCCCCeEEEeccc
Q psy7344 198 CPQMVAKRGHYGAYLQDDWPLLTELGKM 225 (240)
Q Consensus 198 vK~r~~~~~~~~~~l~~G~~~itih~R~ 225 (240)
+=.-+.+-++..+++..||++|+.-.+.
T Consensus 155 aGGlI~~~edv~~al~aGA~aVsTs~~~ 182 (192)
T 3kts_A 155 AGGLIETSEQVNQVIASGAIAVTTSNKH 182 (192)
T ss_dssp EESSCCSHHHHHHHHTTTEEEEEECCGG
T ss_pred EECCcCCHHHHHHHHHcCCeEEEeCCHH
Confidence 7777777777777777799999984443
No 470
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=44.03 E-value=1.2e+02 Score=26.06 Aligned_cols=76 Identities=14% Similarity=0.037 Sum_probs=47.5
Q ss_pred hhHHHhhhcccCCCCceeEEee---cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHH
Q psy7344 101 PLLTELGFKTRSHMCGHSLMFC---GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYS 176 (240)
Q Consensus 101 eli~~i~~~~~~~~~pvivqi~---g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~ 176 (240)
+.+.+.+...+.....++..+. ..+++.+.+.++.+++ |++.|-|. .-.|. ..|+.+.+++++
T Consensus 120 ~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~----------DT~G~---~~P~~v~~lv~~ 186 (345)
T 1nvm_A 120 DVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMA----------DSGGA---MSMNDIRDRMRA 186 (345)
T ss_dssp GGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEE----------CTTCC---CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEEC----------CCcCc---cCHHHHHHHHHH
Confidence 3444433333322334555542 2478888888888876 67766552 11233 369999999999
Q ss_pred hhhccccccCCCCCCC--CeeeEEee
Q psy7344 177 PNMVHFVIAEPHCDGN--DINIGCPQ 200 (240)
Q Consensus 177 ~~~~~~~i~~~~~~~~--~~pvsvK~ 200 (240)
+++. . ++|+.+-.
T Consensus 187 l~~~-----------~~~~~pi~~H~ 201 (345)
T 1nvm_A 187 FKAV-----------LKPETQVGMHA 201 (345)
T ss_dssp HHHH-----------SCTTSEEEEEC
T ss_pred HHHh-----------cCCCceEEEEE
Confidence 9998 4 67887743
No 471
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=43.88 E-value=61 Score=28.11 Aligned_cols=52 Identities=10% Similarity=-0.095 Sum_probs=32.7
Q ss_pred HHHH-HHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEe
Q psy7344 129 LTEA-AKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCP 199 (240)
Q Consensus 129 ~~~a-a~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK 199 (240)
..+. .+++ +.|+|.||||.--. +. |+ ....++...+.++.+++. .++|+++-
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eSt-----rP--~~-~~vs~ee~~~~V~~v~~~-----------~~vPlsID 135 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGA-----DP--EG-ANHSVDQCVATVKEVLQA-----------VGVPLVVV 135 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGG-----CT--TT-TCCCHHHHHHHHHHHHHH-----------CCSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccC-----CC--CC-CCCCHHHHHHHHHHHHhh-----------CCceEEEE
Confidence 3444 4445 66999999964311 11 11 134566677788888877 67888885
No 472
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=43.79 E-value=67 Score=28.00 Aligned_cols=30 Identities=7% Similarity=0.185 Sum_probs=19.9
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+.+||..-.++.+..++.+.++. .+|.|.+
T Consensus 244 ~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~ 274 (374)
T 3sjn_A 244 VSQKIAGGESLTTRYEFQEFITKSNADIVQP 274 (374)
T ss_dssp CSSEEEECTTCCHHHHHHHHHHHHCCSEECC
T ss_pred CCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 46677776666556666666666 6776655
No 473
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=43.79 E-value=70 Score=27.97 Aligned_cols=30 Identities=3% Similarity=-0.038 Sum_probs=21.0
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+++||..-..+.+..++.+.++. .+|.|.+
T Consensus 236 ~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~i 266 (378)
T 3eez_A 236 HSAPVSVDECLVTLQDAARVARDGLAEVFGI 266 (378)
T ss_dssp CCCCEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEECCCCCCHHHHHHHHHcCCCCEEEe
Confidence 56677776666666677777777 6777766
No 474
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=43.76 E-value=1.1e+02 Score=23.71 Aligned_cols=94 Identities=9% Similarity=-0.077 Sum_probs=52.4
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhh
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNM 179 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~ 179 (240)
++.++++.... .+.|+.+.+.-.++.... +-+..+.|+|+|-+... ...+.+.++++.+++
T Consensus 41 ~~~i~~ir~~~--~~~~i~~~~~~~~~~~~~-~~~~~~~Gad~v~v~~~----------------~~~~~~~~~~~~~~~ 101 (211)
T 3f4w_A 41 VNAIKAIKEKY--PHKEVLADAKIMDGGHFE-SQLLFDAGADYVTVLGV----------------TDVLTIQSCIRAAKE 101 (211)
T ss_dssp THHHHHHHHHC--TTSEEEEEEEECSCHHHH-HHHHHHTTCSEEEEETT----------------SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC--CCCEEEEEEEeccchHHH-HHHHHhcCCCEEEEeCC----------------CChhHHHHHHHHHHH
Confidence 46666665431 135776666555544321 22233458898887322 123455566666655
Q ss_pred ccccccCCCCCCCCeeeEEeee-hhcHHHHHHHHhC-CCCeEEEecc
Q psy7344 180 VHFVIAEPHCDGNDINIGCPQM-VAKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 180 ~~~~i~~~~~~~~~~pvsvK~r-~~~~~~~~~~l~~-G~~~itih~R 224 (240)
. .+++.+-+. ..+..+.++.+.+ |+|.|.+|..
T Consensus 102 ~------------g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g 136 (211)
T 3f4w_A 102 A------------GKQVVVDMICVDDLPARVRLLEEAGADMLAVHTG 136 (211)
T ss_dssp H------------TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEECC
T ss_pred c------------CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcCC
Confidence 3 223333211 3345677788888 9999999744
No 475
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=43.70 E-value=1.1e+02 Score=26.68 Aligned_cols=81 Identities=15% Similarity=0.073 Sum_probs=48.4
Q ss_pred CceeEEeecCCHHHHH-HHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLT-EAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~-~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.|+...+..+++++.. ++.+.+++ |+..+-+..|. .+++.-.+.++++++++ +.
T Consensus 137 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avR~a~---------g~ 192 (381)
T 3fcp_A 137 LPVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGA---------------RELATDLRHTRAIVEAL---------GD 192 (381)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHTC----CEEEEECCS---------------SCHHHHHHHHHHHHHHT---------CT
T ss_pred eeeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCC---------------CChHHHHHHHHHHHHHc---------CC
Confidence 4555555556777654 45556664 78888887763 23444456677777762 12
Q ss_pred CeeeEE--eeeh--hcHHHHHHHHhC-CCCeE
Q psy7344 193 DINIGC--PQMV--AKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 193 ~~pvsv--K~r~--~~~~~~~~~l~~-G~~~i 219 (240)
++++.+ +.++ ++..++++.|++ |+.+|
T Consensus 193 ~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i 224 (381)
T 3fcp_A 193 RASIRVDVNQAWDAATGAKGCRELAAMGVDLI 224 (381)
T ss_dssp TCEEEEECTTCBCHHHHHHHHHHHHHTTCSEE
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhhcCccce
Confidence 334444 3343 467889999999 98887
No 476
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=43.45 E-value=42 Score=28.63 Aligned_cols=47 Identities=11% Similarity=-0.003 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCCeeeE--Eeee-hhcH-HHHHHHHh----C-CCCeEEEeccc
Q psy7344 167 WPLLTNLVYSPNMVHFVIAEPHCDGNDINIG--CPQM-VAKR-GHYGAYLQ----D-DWPLLTELGKM 225 (240)
Q Consensus 167 p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvs--vK~r-~~~~-~~~~~~l~----~-G~~~itih~R~ 225 (240)
++.++++++.+++. ..+|. .|.- +.+| ..+++.+. . |+|.+|+|+=.
T Consensus 81 ~~~l~~~i~~l~~~------------g~~VflDlK~~DIpnTv~~ya~~~~~~~~~lg~D~vTvh~~~ 136 (284)
T 3l52_A 81 VAVLEKTVAEARAA------------GALVVMDAKRGDIGSTMAAYAEAFLRKDSPLFSDALTVSPYL 136 (284)
T ss_dssp HHHHHHHHHHHHHT------------TCEEEEEEEECCCHHHHHHHHHHHSSTTSTTCCSEEEECCTT
T ss_pred HHHHHHHHHHHHHC------------CCcEEEEecccCcHHHHHHHHHHHhccccccCCcEEEEeccC
Confidence 45677788777663 34555 5544 5555 45666653 6 89999999743
No 477
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=43.20 E-value=66 Score=28.21 Aligned_cols=78 Identities=14% Similarity=0.006 Sum_probs=43.7
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCC
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDG 191 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~ 191 (240)
+.++.+-.- +-+.++..+.++.+++ +.+.||=- || ..|++..+++.+.
T Consensus 209 d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P--~~-------------~~d~~~~~~l~~~--------------- 258 (403)
T 2ox4_A 209 DVDIIVENHGHTDLVSAIQFAKAIEEFNIFFYEEI--NT-------------PLNPRLLKEAKKK--------------- 258 (403)
T ss_dssp TSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEECC--SC-------------TTSTHHHHHHHHT---------------
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEeCC--CC-------------hhhHHHHHHHHHh---------------
Confidence 456666542 2378888888888877 45566531 11 1466766666553
Q ss_pred CCeeeEEeeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 192 NDINIGCPQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 192 ~~~pvsvK~r~~~~~~~~~~l~~-G~~~iti 221 (240)
+++||..-.++.+..++.+.++. .+|.|.+
T Consensus 259 ~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i 289 (403)
T 2ox4_A 259 IDIPLASGERIYSRWGFLPFLEDRSIDVIQP 289 (403)
T ss_dssp CCSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred CCCCEEecCCcCCHHHHHHHHHcCCCCEEec
Confidence 34555555554444445555555 4555543
No 478
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=43.16 E-value=10 Score=33.64 Aligned_cols=58 Identities=9% Similarity=-0.196 Sum_probs=39.3
Q ss_pred CCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhcccc
Q psy7344 114 MCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFV 183 (240)
Q Consensus 114 ~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~ 183 (240)
..|+++.+++++..+..+.++..++ |+|++.+- .|.- .....+.+.+-.+++.++.|+
T Consensus 128 rvpViaGvg~~st~eai~la~~A~~~Gadavlvv--~PyY----------~k~sq~gl~~hf~~IA~a~Pi 186 (360)
T 4dpp_A 128 SIKVIGNTGSNSTREAIHATEQGFAVGMHAALHI--NPYY----------GKTSIEGLIAHFQSVLHMGPT 186 (360)
T ss_dssp TSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE--CCCS----------SCCCHHHHHHHHHTTGGGSCE
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEc--CCCC----------CCCCHHHHHHHHHHHHHhCCE
Confidence 4699999888899999999998876 89999883 2321 012455555555555555444
No 479
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=42.85 E-value=32 Score=28.23 Aligned_cols=82 Identities=2% Similarity=-0.220 Sum_probs=50.7
Q ss_pred eeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCC--HHHHHHHHHHhhhccccccCCCCCCCCe
Q psy7344 117 HSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDD--WPLLTNLVYSPNMVHFVIAEPHCDGNDI 194 (240)
Q Consensus 117 vivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~--p~~i~~iv~~~~~~~~~i~~~~~~~~~~ 194 (240)
+.+.+.+.+.+++...++.+..++|.||+=.=+ +.+ ++.+.+.++ ... .++
T Consensus 6 Icvpi~~~t~~e~~~~~~~~~~~~D~vElRvD~--------------l~~~~~~~v~~~l~---~~~----------~~~ 58 (231)
T 2ocz_A 6 IVAPVMPRHFDEAQAIDISKYEDVNLIEWRADF--------------LPKDEIVAVAPAIF---EKF----------AGK 58 (231)
T ss_dssp EEEEECCSSHHHHHTCCGGGGTTCSEEEEEGGG--------------SCGGGHHHHHHHHH---HHT----------TTS
T ss_pred EEEEeCCCCHHHHHHHHHHhccCCCEEEEEecc--------------ccccCHHHHHHHHH---HHc----------CCC
Confidence 566677778887666666566688999984431 122 344444443 320 236
Q ss_pred eeEEeeeh-----------hcHHHHHHHHhC-C-CCeEEEeccc
Q psy7344 195 NIGCPQMV-----------AKRGHYGAYLQD-D-WPLLTELGKM 225 (240)
Q Consensus 195 pvsvK~r~-----------~~~~~~~~~l~~-G-~~~itih~R~ 225 (240)
|+.+-.|. +...++.+.+.+ | +++|.|--..
T Consensus 59 PiI~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~ 102 (231)
T 2ocz_A 59 EIIFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDFEYFT 102 (231)
T ss_dssp EEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHHCCSEEEEETTT
T ss_pred cEEEEEeecccCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 88888871 124566666666 7 9999986654
No 480
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=42.42 E-value=1.4e+02 Score=25.19 Aligned_cols=90 Identities=11% Similarity=-0.082 Sum_probs=49.2
Q ss_pred CceeEEee-c--CCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCC
Q psy7344 115 CGHSLMFC-G--NDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCD 190 (240)
Q Consensus 115 ~pvivqi~-g--~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~ 190 (240)
.|+++-+- | .++++..+.+.. ++.|+++|.|--|- .--+.++.+++ .++||++ |+.
T Consensus 91 ~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg~---------------~~~~~i~~l~~---~GIpv~g--Hlg 150 (275)
T 3vav_A 91 ALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEGGE---------------WLAETVRFLVE---RAVPVCA--HVG 150 (275)
T ss_dssp SEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEECCG---------------GGHHHHHHHHH---TTCCEEE--EEE
T ss_pred CCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECCch---------------hHHHHHHHHHH---CCCCEEE--ecC
Confidence 57887773 3 478877665554 45589999885551 11234444443 2444442 100
Q ss_pred CC--------CeeeEEeee--hhcHHHHHHHHhC-CCCeEEEecc
Q psy7344 191 GN--------DINIGCPQM--VAKRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 191 ~~--------~~pvsvK~r--~~~~~~~~~~l~~-G~~~itih~R 224 (240)
.+ ...+..|.. .+.+++-++++++ ||+.|.+-+=
T Consensus 151 ltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~v 195 (275)
T 3vav_A 151 LTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEAV 195 (275)
T ss_dssp SCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEESC
T ss_pred CCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEecCC
Confidence 00 001111111 2456778888999 9999988653
No 481
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=42.25 E-value=23 Score=32.33 Aligned_cols=68 Identities=28% Similarity=0.398 Sum_probs=0.0
Q ss_pred ceeeeCChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHH
Q psy7344 93 GAYLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTN 172 (240)
Q Consensus 93 ga~l~~d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~ 172 (240)
|.-.+.||+++.... ..|+++- +|=+++...++++ + ++.|||+|.| ....-|- +|++++++
T Consensus 384 GtG~~fdW~~l~~~~------~~p~iLA-GGL~p~NV~~ai~-~--~p~gvDvsSG------VE~~pG~---KD~~ki~~ 444 (452)
T 1pii_A 384 GSGQRFDWSLLNGQS------LGNVLLA-GGLGADNCVEAAQ-T--GCAGLDFNSA------VESQPGI---KDARLLAS 444 (452)
T ss_dssp CSSCCCCGGGGTTSC------CTTEEEE-SSCCTTTHHHHHT-T--CCSEEEECGG------GEEETTE---ECHHHHHH
T ss_pred CCCCccCHHHhhccc------CCcEEEE-cCCCHHHHHHHHh-c--CCCEEEeCCc------eeCCCCC---CCHHHHHH
Q ss_pred HHHHhhh
Q psy7344 173 LVYSPNM 179 (240)
Q Consensus 173 iv~~~~~ 179 (240)
++++++.
T Consensus 445 f~~~~r~ 451 (452)
T 1pii_A 445 VFQTLRA 451 (452)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
No 482
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=42.13 E-value=72 Score=27.91 Aligned_cols=81 Identities=14% Similarity=0.073 Sum_probs=50.0
Q ss_pred CceeEEeecCCHHHH-HHHHHHHc-cCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNL-TEAAKLAE-PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~g~d~~~~-~~aa~~le-~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.|+...+..+++++. .++.+.++ .|+..+-+..|. .+++.-.+.++++++++ +.
T Consensus 138 v~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avR~a~---------g~ 193 (382)
T 3dgb_A 138 LPVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGA---------------GEVDRDLAHVIAIKKAL---------GD 193 (382)
T ss_dssp EEBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCS---------------SCHHHHHHHHHHHHHHH---------GG
T ss_pred eeEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCC---------------CCHHHHHHHHHHHHHHc---------CC
Confidence 455545555677654 45566666 478888887763 23444445666666652 02
Q ss_pred CeeeEEee--eh--hcHHHHHHHHhC-CCCeE
Q psy7344 193 DINIGCPQ--MV--AKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 193 ~~pvsvK~--r~--~~~~~~~~~l~~-G~~~i 219 (240)
++++.+.. ++ ++..++++.|++ |+.+|
T Consensus 194 ~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i 225 (382)
T 3dgb_A 194 SASVRVDVNQAWDEAVALRACRILGGNGIDLI 225 (382)
T ss_dssp GSEEEEECTTCBCHHHHHHHHHHHHTTTCCCE
T ss_pred CCeEEEeCCCCCCHHHHHHHHHHHhhcCcCee
Confidence 34454443 33 567889999999 99887
No 483
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=41.99 E-value=33 Score=29.53 Aligned_cols=80 Identities=5% Similarity=-0.130 Sum_probs=52.4
Q ss_pred HHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--h---hcH
Q psy7344 132 AAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM--V---AKR 205 (240)
Q Consensus 132 aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r--~---~~~ 205 (240)
.|+++++ |+|+|-++-.+-.. .. |+-...+...+.+..-++.+..+ +++||++-+. + .+.
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~--~~-G~pD~~~vt~~em~~~~~~I~r~-----------~~~pviaD~d~Gyg~~~~v 106 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTA--SK-GLPDLGIVTSTEVAERARDLVRA-----------TDLPVLVDIDTGFGGVLNV 106 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHH--HH-TCCSSSCSCHHHHHHHHHHHHHH-----------HCCCEEEECTTCSSSHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHHH--hC-CCCCCCcCCHHHHHHHHHHHHHh-----------cCCCEEEECCCCCCCHHHH
Confidence 3555554 78888886522222 12 34333455677666666776666 5779998887 2 245
Q ss_pred HHHHHHHhC-CCCeEEEeccc
Q psy7344 206 GHYGAYLQD-DWPLLTELGKM 225 (240)
Q Consensus 206 ~~~~~~l~~-G~~~itih~R~ 225 (240)
.+.++.+++ |+++|.|-+-+
T Consensus 107 ~~~v~~l~~aGaagv~iED~~ 127 (305)
T 3ih1_A 107 ARTAVEMVEAKVAAVQIEDQQ 127 (305)
T ss_dssp HHHHHHHHHTTCSEEEEECBC
T ss_pred HHHHHHHHHhCCcEEEECCCC
Confidence 667788888 99999998765
No 484
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=41.94 E-value=24 Score=29.27 Aligned_cols=60 Identities=17% Similarity=0.082 Sum_probs=34.7
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHH-HHHHHHHHhh
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWP-LLTNLVYSPN 178 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~-~i~~iv~~~~ 178 (240)
.++++++...+. +.|+++- +.+.+.+++.++++ ++|+|=+| +++..+|+ .+++ +++++
T Consensus 170 ~~~i~~i~~~~~--~~Pv~vG---gGI~t~e~a~~~~~-gAd~VIVG--------------Sa~v~~~~~~~~~-v~~~~ 228 (240)
T 1viz_A 170 IEAVKKTKAVLE--TSTLFYG---GGIKDAETAKQYAE-HADVIVVG--------------NAVYEDFDRALKT-VAAVK 228 (240)
T ss_dssp HHHHHHHHHTCS--SSEEEEE---SSCCSHHHHHHHHT-TCSEEEEC--------------THHHHCHHHHHTH-HHHHH
T ss_pred HHHHHHHHHhcC--CCCEEEE---eccCCHHHHHHHHh-CCCEEEEC--------------hHHHhCHHHHHHH-HHHHH
Confidence 455555544320 3565443 33334445556666 88888663 44567898 8877 76766
Q ss_pred hc
Q psy7344 179 MV 180 (240)
Q Consensus 179 ~~ 180 (240)
+.
T Consensus 229 ~~ 230 (240)
T 1viz_A 229 GE 230 (240)
T ss_dssp CC
T ss_pred hc
Confidence 64
No 485
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=41.81 E-value=1.2e+02 Score=24.28 Aligned_cols=33 Identities=6% Similarity=-0.022 Sum_probs=27.5
Q ss_pred CceeEEeecCCHHHHHHHHHHHcc-CCCEEEecC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINI 147 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~ 147 (240)
.|++..+.+.++++..+.++.+.+ |++.|++..
T Consensus 16 ~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~ 49 (214)
T 1wbh_A 16 GPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTL 49 (214)
T ss_dssp CSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 578888899999999998888755 789998864
No 486
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=41.78 E-value=28 Score=29.30 Aligned_cols=73 Identities=12% Similarity=0.074 Sum_probs=42.4
Q ss_pred HHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh-----h
Q psy7344 129 LTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV-----A 203 (240)
Q Consensus 129 ~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~-----~ 203 (240)
..++...++.|+|.||+-.- .|..+..+|+.+.+-++++++.. ..-+..+|.-+ .
T Consensus 88 v~E~~~Av~~GAdEIDmVin----------ig~l~~g~~~~v~~ei~~v~~a~----------~~~g~~lKvIlEt~~L~ 147 (260)
T 1p1x_A 88 LAETRAAIAYGADEVDVVFP----------YRALMAGNEQVGFDLVKACKEAC----------AAANVLLKVIIETGELK 147 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECC----------HHHHHTTCCHHHHHHHHHHHHHH----------HHTTCEEEEECCHHHHC
T ss_pred HHHHHHHHHcCCCEEEEecc----------HHhhhCCCHHHHHHHHHHHHHHh----------cccCCeEEEEEecccCC
Confidence 44555666789999995332 11112357787777777776651 11123344442 2
Q ss_pred --c-HHHHHHHHhC-CCCeEEE
Q psy7344 204 --K-RGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 204 --~-~~~~~~~l~~-G~~~iti 221 (240)
. ....++...+ |+|+|--
T Consensus 148 d~e~i~~a~~ia~eaGADfVKT 169 (260)
T 1p1x_A 148 DEALIRKASEISIKAGADFIKT 169 (260)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEC
T ss_pred cHHHHHHHHHHHHHhCCCEEEe
Confidence 2 2367777788 9999853
No 487
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=41.64 E-value=82 Score=27.00 Aligned_cols=102 Identities=9% Similarity=-0.085 Sum_probs=0.0
Q ss_pred ceeeeCChhhHHHhhhcccCCCCceeEEeecC-CHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccC---CHH
Q psy7344 93 GAYLQDDWPLLTELGFKTRSHMCGHSLMFCGN-DSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD---DWP 168 (240)
Q Consensus 93 ga~l~~d~eli~~i~~~~~~~~~pvivqi~g~-d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~---~p~ 168 (240)
|++...+.++++++-.. ..|++++-+-. +++++..+++.+.. .|+++-...+-|..-..-. |..
T Consensus 138 gA~~~~n~~LLr~va~~----gkPVilK~Gms~t~~ei~~ave~i~~--------~Gn~~iiL~erg~~y~~~~~~vdl~ 205 (298)
T 3fs2_A 138 PAFLCRQTDLLIAAART----GRVVNVKKGQFLAPWDMKNVLAKITE--------SGNPNVLATERGVSFGYNTLVSDMR 205 (298)
T ss_dssp CGGGTTCHHHHHHHHHT----TSEEEEECCTTCCGGGHHHHHHHHHT--------TTCCCEEEEECCEECSSSCEECCTT
T ss_pred CccccCCHHHHHHHHcc----CCcEEEeCCCCCCHHHHHHHHHHHHH--------cCCCeEEEEECCCCCCCCCCccCHH
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCeeeEE----------------eeehhcHHHHHHHHhC-CCC--eEEEe
Q psy7344 169 LLTNLVYSPNMVHFVIAEPHCDGNDINIGC----------------PQMVAKRGHYGAYLQD-DWP--LLTEL 222 (240)
Q Consensus 169 ~i~~iv~~~~~~~~~i~~~~~~~~~~pvsv----------------K~r~~~~~~~~~~l~~-G~~--~itih 222 (240)
.+..+.+ ...||.+ -.+.+-...++++... ||| .|-.|
T Consensus 206 ~i~~lk~----------------~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H 262 (298)
T 3fs2_A 206 ALPIMAG----------------LGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGFFIETH 262 (298)
T ss_dssp HHHHHHT----------------TTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHHHCCSEEEEEEE
T ss_pred HHHHHHH----------------cCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEEec
No 488
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=41.64 E-value=44 Score=31.07 Aligned_cols=91 Identities=10% Similarity=0.053 Sum_probs=56.2
Q ss_pred CceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccc--cCCHHHHHHHHHHhhhccccccCCCCCCC
Q psy7344 115 CGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYL--QDDWPLLTNLVYSPNMVHFVIAEPHCDGN 192 (240)
Q Consensus 115 ~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l--~~~p~~i~~iv~~~~~~~~~i~~~~~~~~ 192 (240)
.+++.+| .+++-...+-+.++ ..||||+.+|= .|-.+ -.=|..=++|++..+..
T Consensus 265 i~IiaKI--E~~~av~NldeIi~-~sDgIMVARGD---------LgvEip~e~vp~~QK~II~~c~~~------------ 320 (526)
T 4drs_A 265 IKIISKI--ENLEGVINFDSICS-ESDGIMVARGD---------LGMEIPPEKIFVAQKCMISKCNVA------------ 320 (526)
T ss_dssp CEEEEEE--CSHHHHHTHHHHHH-HSSEEEEECTT---------HHHHSCGGGHHHHHHHHHHHHHHH------------
T ss_pred ceeeeeh--hccHHHHHHHHHHh-hccEEEEECCc---------ccccCCHHHHHHHHHHHHHHHHHc------------
Confidence 4677787 44444433434333 37999999992 12222 22355557778776664
Q ss_pred CeeeEEeee-hh-----------cHHHHHHHHhCCCCeEEEeccccccc
Q psy7344 193 DINIGCPQM-VA-----------KRGHYGAYLQDDWPLLTELGKMAMLV 229 (240)
Q Consensus 193 ~~pvsvK~r-~~-----------~~~~~~~~l~~G~~~itih~R~~~~~ 229 (240)
..||.+=+. ++ ..-|.+.++.+|+|+|.+-|=|..-.
T Consensus 321 gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~ 369 (526)
T 4drs_A 321 GKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGA 369 (526)
T ss_dssp TCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCS
T ss_pred CCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhccc
Confidence 557776555 22 34578888888999999976665443
No 489
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=40.90 E-value=76 Score=28.23 Aligned_cols=45 Identities=7% Similarity=-0.098 Sum_probs=32.7
Q ss_pred ccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh---hcHHHHHHHHhC-CC-CeEEEec
Q psy7344 163 LQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV---AKRGHYGAYLQD-DW-PLLTELG 223 (240)
Q Consensus 163 l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~---~~~~~~~~~l~~-G~-~~itih~ 223 (240)
=+.|.++++.+-+ +..||.+|.-. ++....++.+.. |. +.+-+|+
T Consensus 144 ~~~N~pLL~~va~----------------~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc 193 (385)
T 1vli_A 144 EINHLPLLKYVAR----------------LNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHC 193 (385)
T ss_dssp GTTCHHHHHHHHT----------------TCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEE
T ss_pred cccCHHHHHHHHh----------------cCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEec
Confidence 4689998877764 56799999984 445566677788 98 5555674
No 490
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=40.66 E-value=93 Score=27.28 Aligned_cols=89 Identities=16% Similarity=0.093 Sum_probs=53.1
Q ss_pred hhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 100 WPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 100 ~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
++....+.........+++-.. -|.+ .+..+++ +++.+-|+.+ =+.|..+++.+-+
T Consensus 77 ~e~~~~L~~~~~~~Gi~~~st~--fD~~----svd~l~~~~v~~~KI~S~--------------~~~N~pLL~~va~--- 133 (350)
T 3g8r_A 77 PEQMQKLVAEMKANGFKAICTP--FDEE----SVDLIEAHGIEIIKIASC--------------SFTDWPLLERIAR--- 133 (350)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE--CSHH----HHHHHHHTTCCEEEECSS--------------STTCHHHHHHHHT---
T ss_pred HHHHHHHHHHHHHcCCcEEecc--CCHH----HHHHHHHcCCCEEEECcc--------------cccCHHHHHHHHh---
Confidence 4444444333222345555443 3433 3444544 5777777555 3689998877764
Q ss_pred hccccccCCCCCCCCeeeEEeeehh---cHHHHHHHHhC-CCCeEEEecc
Q psy7344 179 MVHFVIAEPHCDGNDINIGCPQMVA---KRGHYGAYLQD-DWPLLTELGK 224 (240)
Q Consensus 179 ~~~~~i~~~~~~~~~~pvsvK~r~~---~~~~~~~~l~~-G~~~itih~R 224 (240)
+..||.+|.-.. +....++.+.. |.+.+-+|+-
T Consensus 134 -------------~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~ 170 (350)
T 3g8r_A 134 -------------SDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCV 170 (350)
T ss_dssp -------------SCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred -------------hCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecC
Confidence 577999999954 44555666677 8876666764
No 491
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=40.65 E-value=77 Score=27.34 Aligned_cols=20 Identities=20% Similarity=0.116 Sum_probs=10.0
Q ss_pred CHHHHH-HHHHHHcc-CCCEEE
Q psy7344 125 DSKNLT-EAAKLAEP-HCDGID 144 (240)
Q Consensus 125 d~~~~~-~aa~~le~-~~d~Id 144 (240)
+.++.. +.++.+++ +.+.||
T Consensus 197 ~~~~a~~~~~~~l~~~~i~~iE 218 (369)
T 2p8b_A 197 KNSANTLTALRSLGHLNIDWIE 218 (369)
T ss_dssp BSHHHHHHHHHTSTTSCCSCEE
T ss_pred CHHHHHHHHHHHHHhCCCcEEE
Confidence 445555 55555544 344444
No 492
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=40.55 E-value=14 Score=30.73 Aligned_cols=61 Identities=13% Similarity=-0.012 Sum_probs=35.9
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
++++++++...+. +.|+++-++-.++++ +.++++ ++|+|=+ |+++..||+.+.++++.++
T Consensus 173 ~~~~v~~ir~~~~--~~pv~vGfGI~~~e~---a~~~~~-gAD~VVV--------------GSai~~~~~~~~e~v~~v~ 232 (235)
T 3w01_A 173 DVSKVQAVSEHLT--ETQLFYGGGISSEQQ---ATEMAA-IADTIIV--------------GDIIYKDIKKALKTVKIKE 232 (235)
T ss_dssp CHHHHHHHHTTCS--SSEEEEESCCCSHHH---HHHHHT-TSSEEEE--------------CTHHHHCHHHHHHTTCC--
T ss_pred CHHHHHHHHHhcC--CCCEEEECCcCCHHH---HHHHHc-CCCEEEE--------------CCceecCHHHHHHHHHHHh
Confidence 4666766654321 357666544456554 444555 7888755 4456679998888877654
Q ss_pred h
Q psy7344 179 M 179 (240)
Q Consensus 179 ~ 179 (240)
+
T Consensus 233 ~ 233 (235)
T 3w01_A 233 S 233 (235)
T ss_dssp -
T ss_pred c
Confidence 3
No 493
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=40.48 E-value=1.5e+02 Score=24.13 Aligned_cols=42 Identities=12% Similarity=-0.035 Sum_probs=28.8
Q ss_pred HHHHHHHhhhccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhCCCCeEEEe
Q psy7344 170 LTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 222 (240)
Q Consensus 170 i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~G~~~itih 222 (240)
..+.++.+++. .++||.+=..+.+.....+.+..|+|.+.+-
T Consensus 189 ~~~~i~~v~~~-----------~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKV-----------TNKPVAVGFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHH-----------CSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhh-----------cCCeEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 33555666665 5778888766776666666554599999883
No 494
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=40.42 E-value=46 Score=29.96 Aligned_cols=73 Identities=7% Similarity=-0.009 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHH-HccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeeeh
Q psy7344 124 NDSKNLTEAAKL-AEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQMV 202 (240)
Q Consensus 124 ~d~~~~~~aa~~-le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r~ 202 (240)
.+++++.+.++. +++|+..+-+..|+ +++.-.+.++++++++ +. +..+-|-++.++
T Consensus 200 ~~~e~~~~~a~~~~~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~---G~----~~~l~vDaN~~~ 256 (441)
T 4a35_A 200 YSDDTLKQLCAQALKDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMI---GP----EKTLMMDANQRW 256 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHH---CT----TSEEEEECTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHh---CC----CCeEEEECCCCC
Confidence 478888776665 46689999888773 3344444556666652 10 023334444444
Q ss_pred --hcHHHHHHHHhC-CCCeE
Q psy7344 203 --AKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 203 --~~~~~~~~~l~~-G~~~i 219 (240)
.+..++++.|++ ++.+|
T Consensus 257 ~~~~A~~~~~~L~~~~~~~i 276 (441)
T 4a35_A 257 DVPEAVEWMSKLAKFKPLWI 276 (441)
T ss_dssp CHHHHHHHHHHHGGGCCSEE
T ss_pred CHHHHHHHHHhhcccCccEE
Confidence 456889999999 98877
No 495
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=40.26 E-value=51 Score=27.97 Aligned_cols=73 Identities=15% Similarity=0.086 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHcc-CCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee--
Q psy7344 125 DSKNLTEAAKLAEP-HCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-- 201 (240)
Q Consensus 125 d~~~~~~aa~~le~-~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-- 201 (240)
..++-.+.++.|.+ |++.||++. |.. -..+++.++.+.+.+. +..+++=.|
T Consensus 25 ~~~~K~~i~~~L~~~Gv~~IE~g~--p~~----------~~~d~e~v~~i~~~~~--------------~~~i~~l~~~~ 78 (293)
T 3ewb_X 25 DVKEKIQIALQLEKLGIDVIEAGF--PIS----------SPGDFECVKAIAKAIK--------------HCSVTGLARCV 78 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--GGG----------CHHHHHHHHHHHHHCC--------------SSEEEEEEESS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC--CCC----------CccHHHHHHHHHHhcC--------------CCEEEEEecCC
Confidence 56777788888866 899999975 321 1246777777765432 224444444
Q ss_pred hhcHHHHHHHHhC-CCCeEEEec
Q psy7344 202 VAKRGHYGAYLQD-DWPLLTELG 223 (240)
Q Consensus 202 ~~~~~~~~~~l~~-G~~~itih~ 223 (240)
..+.....+.+.. |++.|.+..
T Consensus 79 ~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 79 EGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEEE
T ss_pred HHHHHHHHHHHhhcCCCEEEEEe
Confidence 3455566677778 988887754
No 496
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=40.14 E-value=46 Score=29.18 Aligned_cols=75 Identities=11% Similarity=0.014 Sum_probs=41.7
Q ss_pred HHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-hhcHH-HHH
Q psy7344 132 AAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM-VAKRG-HYG 209 (240)
Q Consensus 132 aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r-~~~~~-~~~ 209 (240)
+++.+.+.+..+-+|..- - ..+|.. =.+.++++++.+++. +..+=+-.|.- +.+|. .++
T Consensus 109 lvd~l~~~v~~vKvG~~l--f----~~~G~~---gv~~l~~l~~~l~~~----------g~~VflDlK~~DIpnTv~~ya 169 (342)
T 3n3m_A 109 IINETNKYALTFKMNFAF--Y----IPYGSV---GIDVLKNVFDYLYEL----------NIPTILDMKINDIGNTVKNYR 169 (342)
T ss_dssp HHHHHGGGCSEEEEEGGG--T----STTTHH---HHHHHHHHHHHHHHH----------TCCEEEEEEECCCHHHHHHHH
T ss_pred HHHHhcCcCcEEEecHHH--H----HhcCHH---HHHHHHHHHHHHHhC----------CCeEEEEeecCCcHHHHHHHH
Confidence 344444456777776551 1 112221 134566777766653 02233445555 55554 567
Q ss_pred HHH-hC-CCCeEEEeccc
Q psy7344 210 AYL-QD-DWPLLTELGKM 225 (240)
Q Consensus 210 ~~l-~~-G~~~itih~R~ 225 (240)
+.+ .. |+|.+|+|+=.
T Consensus 170 ~~~~~~lgaD~vTVh~~~ 187 (342)
T 3n3m_A 170 KFIFEYLKSDSCTVNIYM 187 (342)
T ss_dssp HHHHTTSCCSEEEECCTT
T ss_pred HHHHHhcCCCEEEEcccC
Confidence 765 67 99999999864
No 497
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=39.77 E-value=81 Score=27.76 Aligned_cols=78 Identities=10% Similarity=0.086 Sum_probs=48.6
Q ss_pred CHHHHH-HHHHHH-ccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhhhccccccCCCCCCCCeeeEEeee-
Q psy7344 125 DSKNLT-EAAKLA-EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMVHFVIAEPHCDGNDINIGCPQM- 201 (240)
Q Consensus 125 d~~~~~-~aa~~l-e~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~~~~~~i~~~~~~~~~~pvsvK~r- 201 (240)
++++.. ++++.. +.|+..+-+..|.+.. ......|+...+.++++++++ +.++++.+...
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~--------~d~~~~~~~~~~~v~avReav---------G~d~~l~vDaN~ 208 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVG--------RNRDEWPGRTEEIIPTMRREL---------GDDVDLLIDANS 208 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTC--------TTCCSSTTHHHHHHHHHHHHH---------CSSSEEEEECTT
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCcc--------cccccchhHHHHHHHHHHHHh---------CCCCeEEEeCCC
Confidence 454443 344443 5689999998885431 111123455557778888763 13556666554
Q ss_pred -h--hcHHHHHHHHhC-CCCeE
Q psy7344 202 -V--AKRGHYGAYLQD-DWPLL 219 (240)
Q Consensus 202 -~--~~~~~~~~~l~~-G~~~i 219 (240)
+ ++..++++.|++ |+.+|
T Consensus 209 ~~~~~~A~~~~~~l~~~~i~~i 230 (388)
T 3tcs_A 209 CYTPDRAIEVGHMLQDHGFCHF 230 (388)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEE
T ss_pred CcCHHHHHHHHHHHhhcCCeEE
Confidence 3 567889999999 99887
No 498
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=39.70 E-value=1.1e+02 Score=26.74 Aligned_cols=32 Identities=13% Similarity=-0.027 Sum_probs=21.8
Q ss_pred CCceeEEee-cCCHHHHHHHHHHHcc-CCCEEEe
Q psy7344 114 MCGHSLMFC-GNDSKNLTEAAKLAEP-HCDGIDI 145 (240)
Q Consensus 114 ~~pvivqi~-g~d~~~~~~aa~~le~-~~d~Idi 145 (240)
+.++.+..- +-+.++..+.++.+++ +.+.||=
T Consensus 210 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEe 243 (410)
T 2qq6_A 210 EVEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEE 243 (410)
T ss_dssp SSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhcCCCeEEC
Confidence 355655542 2378888888888877 5777773
No 499
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=39.65 E-value=61 Score=27.24 Aligned_cols=100 Identities=8% Similarity=-0.160 Sum_probs=0.0
Q ss_pred ceeeeCChhhHHHhhhcccCCCCceeEEeec-CCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccC---CHH
Q psy7344 93 GAYLQDDWPLLTELGFKTRSHMCGHSLMFCG-NDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD---DWP 168 (240)
Q Consensus 93 ga~l~~d~eli~~i~~~~~~~~~pvivqi~g-~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~---~p~ 168 (240)
|++...+.++++++-.. ..|++++-+. ++++++..+++.+.. .|+|.-...+.|.....-. |..
T Consensus 101 gA~~~rn~~ll~~~a~~----~~PV~lK~G~~~t~~e~~~Av~~i~~--------~GN~~i~L~~rG~~~~y~~~~~dl~ 168 (267)
T 2nwr_A 101 PAFLCRQTDLLLAAAKT----GRAVNVKKGQFLAPWDTKNVVEKLKF--------GGAKEIYLTERGTTFGYNNLVVDFR 168 (267)
T ss_dssp CGGGTTCHHHHHHHHTT----TSEEEEECCTTCCGGGGHHHHHHHHH--------TTCSSEEEEECCEECSSSCEECCTT
T ss_pred CcccccCHHHHHHHHcC----CCcEEEeCCCCCCHHHHHHHHHHHHH--------cCCCeEEEEECCCCCCCCccccCHH
Q ss_pred HHHHHHHHhhhccccccCCCCCCCCeeeEE----------------eeehhcHHHHHHHHhC-CCCeEEE
Q psy7344 169 LLTNLVYSPNMVHFVIAEPHCDGNDINIGC----------------PQMVAKRGHYGAYLQD-DWPLLTE 221 (240)
Q Consensus 169 ~i~~iv~~~~~~~~~i~~~~~~~~~~pvsv----------------K~r~~~~~~~~~~l~~-G~~~iti 221 (240)
.+..+.+ .. ||.+ ..+.+-...++++... |++++.|
T Consensus 169 ~i~~lk~----------------~~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aava~Ga~G~mI 221 (267)
T 2nwr_A 169 SLPIMKQ----------------WA-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFM 221 (267)
T ss_dssp HHHHHTT----------------TS-EEEEETTGGGCCTTC------CCGGGHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHH----------------cC-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHHHcCCCEEEE
No 500
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=39.62 E-value=1.7e+02 Score=24.54 Aligned_cols=93 Identities=15% Similarity=-0.060 Sum_probs=56.1
Q ss_pred ChhhHHHhhhcccCCCCceeEEeecCCHHHHHHHHHHHccCCCEEEecCCCchhhhhcccccccccCCHHHHHHHHHHhh
Q psy7344 99 DWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178 (240)
Q Consensus 99 d~eli~~i~~~~~~~~~pvivqi~g~d~~~~~~aa~~le~~~d~Idin~gCP~~~~~~~g~G~~l~~~p~~i~~iv~~~~ 178 (240)
..+.+..+...+ +.|+..+=+..|+.+.. +..+.|+|+|-|+..+ | +++.++++++..+
T Consensus 108 s~~~L~~ir~~v---~lPVl~Kdfi~d~~qi~---ea~~~GAD~VlLi~a~-------------L--~~~~l~~l~~~a~ 166 (272)
T 3tsm_A 108 APEFLTAARQAC---SLPALRKDFLFDPYQVY---EARSWGADCILIIMAS-------------V--DDDLAKELEDTAF 166 (272)
T ss_dssp CHHHHHHHHHTS---SSCEEEESCCCSTHHHH---HHHHTTCSEEEEETTT-------------S--CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhc---CCCEEECCccCCHHHHH---HHHHcCCCEEEEcccc-------------c--CHHHHHHHHHHHH
Confidence 345555555433 47887664445666544 3345689999987662 2 5677788887765
Q ss_pred hccccccCCCCCCCCeeeEEeeehhcHHHHHHHHhC-CCCeEEEeccccc
Q psy7344 179 MVHFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAM 227 (240)
Q Consensus 179 ~~~~~i~~~~~~~~~~pvsvK~r~~~~~~~~~~l~~-G~~~itih~R~~~ 227 (240)
+. |...-+.+ .+..++ +.+.+ |++.|-+.+|.-.
T Consensus 167 ~l----------Gl~~lvev----h~~eEl-~~A~~~ga~iIGinnr~l~ 201 (272)
T 3tsm_A 167 AL----------GMDALIEV----HDEAEM-ERALKLSSRLLGVNNRNLR 201 (272)
T ss_dssp HT----------TCEEEEEE----CSHHHH-HHHTTSCCSEEEEECBCTT
T ss_pred Hc----------CCeEEEEe----CCHHHH-HHHHhcCCCEEEECCCCCc
Confidence 53 12222222 344555 44556 9999999888644
Done!