Your job contains 1 sequence.
>psy7344
MSEGGRDRIETEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGP
LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELGFKTRSHMCGHSLM
FCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPNMV
HFVIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGKMAMLVGILDNTGSWTP
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7344
(240 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031238 - symbol:CG3645 species:7227 "Drosophila m... 222 1.3e-17 1
UNIPROTKB|J3QLE4 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 209 5.3e-17 1
UNIPROTKB|J3QQZ0 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 209 5.3e-17 1
UNIPROTKB|Q6P1R4 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 209 3.0e-16 1
UNIPROTKB|E2R9L8 - symbol:DUS1L "Uncharacterized protein"... 209 3.0e-16 1
UNIPROTKB|J9NYR0 - symbol:DUS1L "Uncharacterized protein"... 209 4.7e-16 1
UNIPROTKB|G3N340 - symbol:DUS1L "Uncharacterized protein"... 207 5.0e-16 1
MGI|MGI:1915980 - symbol:Dus1l "dihydrouridine synthase 1... 205 8.2e-16 1
UNIPROTKB|E1BH75 - symbol:DUS1L "Uncharacterized protein"... 195 1.6e-15 1
UNIPROTKB|E1C6D2 - symbol:DUS1L "Uncharacterized protein"... 199 3.8e-15 1
UNIPROTKB|E1BWI8 - symbol:DUS1L "Uncharacterized protein"... 199 3.9e-15 1
RGD|708389 - symbol:Pp3111 "PP3111 protein" species:10116... 197 5.0e-15 1
ZFIN|ZDB-GENE-030131-1435 - symbol:dus1l "dihydrouridine ... 196 9.2e-15 1
UNIPROTKB|J3QQL9 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 186 1.4e-14 1
POMBASE|SPBC36B7.04 - symbol:SPBC36B7.04 "tRNA dihydrouri... 188 3.8e-14 1
TAIR|locus:2155528 - symbol:AT5G67220 species:3702 "Arabi... 188 4.4e-14 1
SGD|S000004545 - symbol:DUS1 "Dihydrouridine synthase" sp... 188 4.4e-14 1
ASPGD|ASPL0000054271 - symbol:AN0956 species:162425 "Emer... 189 6.3e-14 1
CGD|CAL0004455 - symbol:orf19.1404 species:5476 "Candida ... 179 5.3e-13 1
UNIPROTKB|G4MUR1 - symbol:MGG_08825 "tRNA-dihydrouridine ... 179 8.8e-13 1
WB|WBGene00009452 - symbol:F36A2.2 species:6239 "Caenorha... 163 6.9e-10 1
DICTYBASE|DDB_G0278803 - symbol:dus1l "tRNA-dihydrouridin... 159 1.6e-09 1
UNIPROTKB|J3QKP9 - symbol:DUS1L "tRNA-dihydrouridine(16/1... 128 2.9e-06 1
UNIPROTKB|F8WEL2 - symbol:DUS4L "tRNA-dihydrouridine(20a/... 103 2.7e-05 1
UNIPROTKB|I3LP14 - symbol:DUS4L "Uncharacterized protein"... 118 4.3e-05 1
UNIPROTKB|A6QPA8 - symbol:DUS4L "DUS4L protein" species:9... 118 4.3e-05 1
UNIPROTKB|E2RRJ8 - symbol:DUS4L "Uncharacterized protein"... 119 6.6e-05 1
UNIPROTKB|O95620 - symbol:DUS4L "tRNA-dihydrouridine(20a/... 119 6.6e-05 1
MGI|MGI:1919166 - symbol:Dus4l "dihydrouridine synthase 4... 117 0.00012 1
UNIPROTKB|D4A0T1 - symbol:Dus4l "Protein Dus4l" species:1... 115 0.00020 1
RGD|1311445 - symbol:Dus4l "dihydrouridine synthase 4-lik... 115 0.00020 1
>FB|FBgn0031238 [details] [associations]
symbol:CG3645 species:7227 "Drosophila melanogaster"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:AE014134 Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042
KO:K05542 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:AY051946 EMBL:BT124833
RefSeq:NP_608507.1 RefSeq:NP_722619.1 UniGene:Dm.4432 SMR:Q9VPM1
IntAct:Q9VPM1 MINT:MINT-325917 STRING:Q9VPM1
EnsemblMetazoa:FBtr0078140 EnsemblMetazoa:FBtr0078141 GeneID:33190
KEGG:dme:Dmel_CG3645 UCSC:CG3645-RA FlyBase:FBgn0031238
InParanoid:Q9VPM1 OrthoDB:EOG41VHJ8 GenomeRNAi:33190 NextBio:782335
Uniprot:Q9VPM1
Length = 505
Score = 222 (83.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 37/69 (53%), Positives = 53/69 (76%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FCGND++ + +AA LA+ HCD +DIN+GCPQ +AKRGHYG++LQD+W LLT +V +
Sbjct: 87 IQFCGNDAQQILDAALLAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEIV---S 143
Query: 179 MVHFVIAEP 187
+H +A P
Sbjct: 144 TLHAKLAVP 152
Score = 173 (66.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 48 LVVHFSWVSKNGPLFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L++ F + + +A+ HCD +DIN+GCPQ +AKRGHYG++LQD+W LLTE+
Sbjct: 85 LIIQFC--GNDAQQILDAALLAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEI 141
Score = 170 (64.9 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 26/38 (68%), Positives = 34/38 (89%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
+ HCD +DIN+GCPQ +AKRGHYG++LQD+W LLTE+V
Sbjct: 105 QDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEIV 142
Score = 167 (63.8 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 26/40 (65%), Positives = 35/40 (87%)
Query: 183 VIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 222
++A+ HCD DIN+GCPQ +AKRGHYG++LQD+W LLTE+
Sbjct: 102 LLAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEI 141
>UNIPROTKB|J3QLE4 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000582529 Uniprot:J3QLE4
Length = 309
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 48/122 (39%), Positives = 68/122 (55%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL ++
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMIL--- 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
+ H ++ P C I + P+ + K Y L+ LLT G+ G L
Sbjct: 135 LAHEKLSVPVTCK---IRV-FPE-IDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 172 (65.6 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRM 132
Score = 161 (61.7 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 24/39 (61%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMIL 134
>UNIPROTKB|J3QQZ0 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000578907 Uniprot:J3QQZ0
Length = 301
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 48/122 (39%), Positives = 68/122 (55%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL ++
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMIL--- 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
+ H ++ P C I + P+ + K Y L+ LLT G+ G L
Sbjct: 135 LAHEKLSVPVTCK---IRV-FPE-IDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 172 (65.6 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRM 132
Score = 161 (61.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 24/39 (61%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMIL 134
>UNIPROTKB|Q6P1R4 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC135056 EMBL:BC017081
EMBL:BC062566 EMBL:BC064918 IPI:IPI00335251 RefSeq:NP_071439.3
UniGene:Hs.514599 UniGene:Hs.741994 ProteinModelPortal:Q6P1R4
SMR:Q6P1R4 STRING:Q6P1R4 DMDM:74749069 PaxDb:Q6P1R4 PRIDE:Q6P1R4
DNASU:64118 Ensembl:ENST00000306796 Ensembl:ENST00000354321
GeneID:64118 KEGG:hsa:64118 UCSC:uc002kdq.3 CTD:64118
GeneCards:GC17M080015 H-InvDB:HIX0039074 HGNC:HGNC:30086
HPA:HPA023384 neXtProt:NX_Q6P1R4 PharmGKB:PA142671936
eggNOG:COG0042 HOGENOM:HOG000203649 HOVERGEN:HBG061241
InParanoid:Q6P1R4 KO:K05542 OMA:WEMAEEY OrthoDB:EOG4SN1NJ
GenomeRNAi:64118 NextBio:65992 ArrayExpress:Q6P1R4 Bgee:Q6P1R4
CleanEx:HS_DUS1L Genevestigator:Q6P1R4 GermOnline:ENSG00000169718
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 Uniprot:Q6P1R4
Length = 473
Score = 209 (78.6 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 48/122 (39%), Positives = 68/122 (55%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL ++
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMIL--- 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
+ H ++ P C I + P+ + K Y L+ LLT G+ G L
Sbjct: 135 LAHEKLSVPVTCK---IRV-FPE-IDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGAA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 172 (65.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRM 132
Score = 161 (61.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 24/39 (61%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMIL 134
>UNIPROTKB|E2R9L8 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 CTD:64118 KO:K05542 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AAEX03006160
EMBL:AAEX03006161 RefSeq:XP_848227.1 ProteinModelPortal:E2R9L8
Ensembl:ENSCAFT00000009615 GeneID:475927 KEGG:cfa:475927
NextBio:20851671 Uniprot:E2R9L8
Length = 475
Score = 209 (78.6 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 48/122 (39%), Positives = 69/122 (56%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMIL--- 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
+ H ++ P C I + P+ + K Y L+ LLT G+ G L T
Sbjct: 135 LAHEKLSVPVTCK---IRV-FPE-IDKTVKYAQMLEKAGCQLLTVHGRTKEQKGPLSGTA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 168 (64.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRM 132
Score = 157 (60.3 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 23/39 (58%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMIL 134
>UNIPROTKB|J9NYR0 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AAEX03006160
EMBL:AAEX03006161 Ensembl:ENSCAFT00000045880 Uniprot:J9NYR0
Length = 584
Score = 209 (78.6 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 48/122 (39%), Positives = 69/122 (56%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMIL--- 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
+ H ++ P C I + P+ + K Y L+ LLT G+ G L T
Sbjct: 135 LAHEKLSVPVTCK---IRV-FPE-IDKTVKYAQMLEKAGCQLLTVHGRTKEQKGPLSGTA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRM 132
Score = 157 (60.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 23/39 (58%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMIL 134
>UNIPROTKB|G3N340 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:DAAA02049400 EMBL:DAAA02049401
Ensembl:ENSBTAT00000063588 Uniprot:G3N340
Length = 475
Score = 207 (77.9 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 49/122 (40%), Positives = 67/122 (54%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRM---RT 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
H V+ P C I + P+ + K Y L+ LLT G+ G L T
Sbjct: 135 WGHMVVGCPVTCK---IRV-FPE-IDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGTA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 174 (66.3 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRM 132
Query: 107 GFKTRSHM 114
+T HM
Sbjct: 133 --RTWGHM 138
Score = 153 (58.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 23/37 (62%), Positives = 32/37 (86%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 48
+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRM 132
>MGI|MGI:1915980 [details] [associations]
symbol:Dus1l "dihydrouridine synthase 1-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
MGI:MGI:1915980 Gene3D:3.20.20.70 GO:GO:0050660 CTD:64118
eggNOG:COG0042 HOVERGEN:HBG061241 KO:K05542 OrthoDB:EOG4SN1NJ
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 EMBL:AK004041
EMBL:AK088243 EMBL:BC019480 IPI:IPI00224714 RefSeq:NP_081100.2
UniGene:Mm.180622 ProteinModelPortal:Q8C2P3 SMR:Q8C2P3
STRING:Q8C2P3 PRIDE:Q8C2P3 Ensembl:ENSMUST00000167023 GeneID:68730
KEGG:mmu:68730 UCSC:uc007mur.1 GeneTree:ENSGT00550000075089
InParanoid:Q8C2P3 NextBio:327790 Bgee:Q8C2P3 CleanEx:MM_DUS1L
Genevestigator:Q8C2P3 GermOnline:ENSMUSG00000025155 Uniprot:Q8C2P3
Length = 475
Score = 205 (77.2 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 47/122 (38%), Positives = 69/122 (56%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMIL--- 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
+ H ++ P C I + P+ + K Y L+ LLT G+ G + T
Sbjct: 135 LAHERLSVPVTCK---IRV-FPE-IDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 168 (64.2 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRM 132
Score = 157 (60.3 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 23/39 (58%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMIL 134
>UNIPROTKB|E1BH75 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:DAAA02049400 EMBL:DAAA02049401
IPI:IPI00906369 Ensembl:ENSBTAT00000057257 OMA:RMSILAW
Uniprot:E1BH75
Length = 270
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 47/122 (38%), Positives = 66/122 (54%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMSI--- 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
+ + P C I + P+ + K Y L+ LLT G+ G L T
Sbjct: 135 LAWTTSSXPVTCK---IRV-FPE-IDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPLSGTA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 168 (64.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 30/60 (50%), Positives = 43/60 (71%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRM 132
Score = 167 (63.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVVHFSWVSKNGPLFMGPLFIAEP 71
+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL + + +W + + P+ E
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMSI-LAWTTSSXPVTCKIRVFPE- 153
Query: 72 HCDGIDINIGCPQMVAKRG 90
ID + QM+ K G
Sbjct: 154 ----IDKTVRYAQMLEKAG 168
>UNIPROTKB|E1C6D2 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:AADN02029975 IPI:IPI00599742
ProteinModelPortal:E1C6D2 Ensembl:ENSGALT00000004402 Uniprot:E1C6D2
Length = 478
Score = 199 (75.1 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++ N
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMILLAN 137
Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 34 YGAYLQDDWPLLTELVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHY 92
YG +D PL +V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHY
Sbjct: 66 YGEACPEDRPL----IVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHY 118
Query: 93 GAYLQDDWPLLTEL 106
GA+LQ++W LL +
Sbjct: 119 GAFLQEEWDLLQRM 132
Score = 161 (61.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 159 YGAYLQDDWPLLTNLVYSPNMVHF---VIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDD 215
YG +D PL+ + V ++A+ +CD D+N+GCPQM+AKRGHYGA+LQ++
Sbjct: 66 YGEACPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEE 125
Query: 216 WPLLTEL 222
W LL +
Sbjct: 126 WDLLQRM 132
Score = 157 (60.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 23/39 (58%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMIL 134
>UNIPROTKB|E1BWI8 [details] [associations]
symbol:DUS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 OMA:WEMAEEY GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 GeneTree:ENSGT00550000075089 EMBL:AADN02029975
IPI:IPI00820914 ProteinModelPortal:E1BWI8
Ensembl:ENSGALT00000038896 NextBio:20820685 Uniprot:E1BWI8
Length = 486
Score = 199 (75.1 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL ++ N
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMILLAN 137
Score = 173 (66.0 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 34 YGAYLQDDWPLLTELVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHY 92
YG +D PL +V F N P +F+ +A+ +CD ID+N+GCPQM+AKRGHY
Sbjct: 66 YGEACPEDRPL----IVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHY 118
Query: 93 GAYLQDDWPLLTEL 106
GA+LQ++W LL +
Sbjct: 119 GAFLQEEWDLLQRM 132
Score = 161 (61.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 159 YGAYLQDDWPLLTNLVYSPNMVHF---VIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDD 215
YG +D PL+ + V ++A+ +CD D+N+GCPQM+AKRGHYGA+LQ++
Sbjct: 66 YGEACPEDRPLIVQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQEE 125
Query: 216 WPLLTEL 222
W LL +
Sbjct: 126 WDLLQRM 132
Score = 157 (60.3 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 23/39 (58%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQ++W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGHYGAFLQEEWDLLQRMIL 134
>RGD|708389 [details] [associations]
symbol:Pp3111 "PP3111 protein" species:10116 "Rattus norvegicus"
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 RGD:708389 Gene3D:3.20.20.70
GO:GO:0050660 HOVERGEN:HBG061241 KO:K05542 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:AF508021 EMBL:AY327509
EMBL:AY327510 IPI:IPI00203718 RefSeq:NP_742015.1 UniGene:Rn.179335
ProteinModelPortal:Q8K582 PRIDE:Q8K582 GeneID:246185
KEGG:rno:246185 CTD:246185 NextBio:623466 Genevestigator:Q8K582
Uniprot:Q8K582
Length = 438
Score = 197 (74.4 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKRG YGA+LQ++W LL ++
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFLQEEWDLLQRMIL--- 134
Query: 179 MVHFVIAEP-HCDGNDINIGCPQMVAKRGHYGAYLQD-DWPLLTELGKMAMLVGILDNTG 236
+ H ++ P C I + P+ + K Y L+ LLT G+ G + T
Sbjct: 135 LAHERLSVPVTCK---IRV-FPE-IDKTVRYAQMLEKAGCQLLTVHGRTKEQKGPMAGTA 189
Query: 237 SW 238
SW
Sbjct: 190 SW 191
Score = 160 (61.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 48 LVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
L+V F N P +F+ +A+ +CD ID+N+GCPQM+AKRG YGA+LQ++W LL +
Sbjct: 76 LIVQFC---ANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKRGRYGAFLQEEWDLLQRM 132
Score = 149 (57.5 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 22/39 (56%), Positives = 33/39 (84%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRG YGA+LQ++W LL +++
Sbjct: 96 QDYCDAIDLNLGCPQMIAKRGRYGAFLQEEWDLLQRMIL 134
>ZFIN|ZDB-GENE-030131-1435 [details] [associations]
symbol:dus1l "dihydrouridine synthase 1-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001269 InterPro:IPR013785 Pfam:PF01207
ZFIN:ZDB-GENE-030131-1435 Gene3D:3.20.20.70 GO:GO:0050660
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:BX897685 IPI:IPI00481340
ProteinModelPortal:F1QQD1 Ensembl:ENSDART00000127028
ArrayExpress:F1QQD1 Bgee:F1QQD1 Uniprot:F1QQD1
Length = 511
Score = 196 (74.1 bits), Expect = 9.2e-15, P = 9.2e-15
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 121 FCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
FC ND + +AA LA+ +CD ID+N+GCPQM+AKRGHYG +LQD+W LL ++ N
Sbjct: 112 FCANDPEVFIQAALLAQDYCDAIDLNLGCPQMIAKRGHYGVFLQDEWDLLEKMIKLAN 169
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 34 YGAYLQDDWPLLTELVVHFSWVSKNGP-LFMGPLFIAEPHCDGIDINIGCPQMVAKRGHY 92
Y Q+D PL+T+ N P +F+ +A+ +CD ID+N+GCPQM+AKRGHY
Sbjct: 98 YSEVNQEDRPLITQFCA-------NDPEVFIQAALLAQDYCDAIDLNLGCPQMIAKRGHY 150
Query: 93 GAYLQDDWPLLTEL 106
G +LQD+W LL ++
Sbjct: 151 GVFLQDEWDLLEKM 164
Score = 174 (66.3 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 159 YGAYLQDDWPLLTNLVYSPNMVHF---VIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDD 215
Y Q+D PL+T + V ++A+ +CD D+N+GCPQM+AKRGHYG +LQD+
Sbjct: 98 YSEVNQEDRPLITQFCANDPEVFIQAALLAQDYCDAIDLNLGCPQMIAKRGHYGVFLQDE 157
Query: 216 WPLLTELGKMA 226
W LL ++ K+A
Sbjct: 158 WDLLEKMIKLA 168
Score = 157 (60.3 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 23/38 (60%), Positives = 33/38 (86%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
+ +CD ID+N+GCPQM+AKRGHYG +LQD+W LL +++
Sbjct: 128 QDYCDAIDLNLGCPQMIAKRGHYGVFLQDEWDLLEKMI 165
>UNIPROTKB|J3QQL9 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AC135056 HGNC:HGNC:30086
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
Ensembl:ENST00000577907 Uniprot:J3QQL9
Length = 152
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 122 CGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 174
C D + +AA LA+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL ++
Sbjct: 70 CPEDRPLIVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMI 122
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 60 PLFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
PL + +A+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL +
Sbjct: 75 PLIVQAALLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRM 121
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 24/39 (61%), Positives = 34/39 (87%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELVV 50
+ +CD ID+N+GCPQM+AKRGHYGA+LQD+W LL +++
Sbjct: 85 QDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRMIL 123
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 24/40 (60%), Positives = 34/40 (85%)
Query: 183 VIAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 222
++A+ +CD D+N+GCPQM+AKRGHYGA+LQD+W LL +
Sbjct: 82 LLAQDYCDAIDLNLGCPQMIAKRGHYGAFLQDEWDLLQRM 121
>POMBASE|SPBC36B7.04 [details] [associations]
symbol:SPBC36B7.04 "tRNA dihydrouridine synthase Dus1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006400 "tRNA modification" evidence=ISO]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=ISO]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 PomBase:SPBC36B7.04 GO:GO:0005739
GO:GO:0005634 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CU329671
GenomeReviews:CU329671_GR eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 PANTHER:PTHR11082 RefSeq:NP_595986.1
ProteinModelPortal:Q9HGN6 STRING:Q9HGN6 EnsemblFungi:SPBC36B7.04.1
GeneID:2541048 KEGG:spo:SPBC36B7.04 OMA:RCQPYFR OrthoDB:EOG480N5B
NextBio:20802162 Uniprot:Q9HGN6
Length = 399
Score = 188 (71.2 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 27/56 (48%), Positives = 46/56 (82%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 174
+ FCGND + + +AAK+A P+CD +D+N+GCPQ +AK+G YG++LQ++W L+ +++
Sbjct: 79 IQFCGNDPEIMLKAAKIAAPYCDAVDVNLGCPQGIAKKGKYGSFLQENWNLIESII 134
Score = 140 (54.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 68 IAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELGFKTRSHM 114
IA P+CD +D+N+GCPQ +AK+G YG++LQ++W L+ + K + +
Sbjct: 95 IAAPYCDAVDVNLGCPQGIAKKGKYGSFLQENWNLIESIITKLHTEL 141
Score = 135 (52.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 18/37 (48%), Positives = 31/37 (83%)
Query: 13 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
P+CD +D+N+GCPQ +AK+G YG++LQ++W L+ ++
Sbjct: 98 PYCDAVDVNLGCPQGIAKKGKYGSFLQENWNLIESII 134
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 20/39 (51%), Positives = 31/39 (79%)
Query: 184 IAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 222
IA P+CD D+N+GCPQ +AK+G YG++LQ++W L+ +
Sbjct: 95 IAAPYCDAVDVNLGCPQGIAKKGKYGSFLQENWNLIESI 133
>TAIR|locus:2155528 [details] [associations]
symbol:AT5G67220 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006808
"regulation of nitrogen utilization" evidence=ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:CP002688 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AB020742
HOGENOM:HOG000203649 KO:K05542 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 UniGene:At.66656 UniGene:At.9615 EMBL:AY049299
EMBL:AY102157 IPI:IPI00528780 RefSeq:NP_201523.1
ProteinModelPortal:Q9FH91 SMR:Q9FH91 STRING:Q9FH91 PRIDE:Q9FH91
EnsemblPlants:AT5G67220.1 GeneID:836857 KEGG:ath:AT5G67220
TAIR:At5g67220 InParanoid:Q9FH91 OMA:VERAWAH PhylomeDB:Q9FH91
ProtClustDB:CLSN2686916 Genevestigator:Q9FH91 Uniprot:Q9FH91
Length = 423
Score = 188 (71.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 32/56 (57%), Positives = 43/56 (76%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 174
+ FC ND L EAAK EP+CD +DIN+GCPQ +A+RG+YGA+L D+ PL+ +LV
Sbjct: 147 VQFCANDPDTLLEAAKRVEPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLV 202
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
EP+CD +DIN+GCPQ +A+RG+YGA+L D+ PL+ LV
Sbjct: 165 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLV 202
Score = 138 (53.6 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 70 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
EP+CD +DIN+GCPQ +A+RG+YGA+L D+ PL+ L
Sbjct: 165 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSL 201
Score = 133 (51.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 186 EPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL-GKMAMLVGI 231
EP+CD DIN+GCPQ +A+RG+YGA+L D+ PL+ L K+A + +
Sbjct: 165 EPYCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKLAQNLNV 211
>SGD|S000004545 [details] [associations]
symbol:DUS1 "Dihydrouridine synthase" species:4932
"Saccharomyces cerevisiae" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA;IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006400 "tRNA modification" evidence=IMP;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0002943 "tRNA
dihydrouridine synthesis" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 SGD:S000004545
GO:GO:0005634 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:BK006946
EMBL:Z46373 eggNOG:COG0042 HOGENOM:HOG000203649 KO:K05542
GO:GO:0017150 PANTHER:PTHR11082 GeneTree:ENSGT00550000075089
OMA:RCQPYFR OrthoDB:EOG480N5B PIR:S48817 RefSeq:NP_013631.1
ProteinModelPortal:P53759 SMR:P53759 IntAct:P53759
MINT:MINT-4083769 STRING:P53759 PaxDb:P53759 PeptideAtlas:P53759
EnsemblFungi:YML080W GeneID:854895 KEGG:sce:YML080W CYGD:YML080w
BioCyc:MetaCyc:MONOMER-16676 NextBio:977861 Genevestigator:P53759
GermOnline:YML080W Uniprot:P53759
Length = 423
Score = 188 (71.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 95 YLQDDWPLLTELGFKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVA 154
Y +D+W L G + + FC ND + L AAKL E CD +D+N+GCPQ +A
Sbjct: 72 YREDNWSSLD--GSSVDRPLV---VQFCANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIA 126
Query: 155 KRGHYGAYLQDDWPLLTNLVYSPNMVH 181
K+GHYG++L ++W L+ NL+ N +H
Sbjct: 127 KKGHYGSFLMEEWDLIHNLI---NTLH 150
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 37 YLQDDWPLLT------ELVVHFSWVSKNGPLFM-GPLFIAEPHCDGIDINIGCPQMVAKR 89
Y +D+W L LVV F N P ++ + E CD +D+N+GCPQ +AK+
Sbjct: 72 YREDNWSSLDGSSVDRPLVVQFC---ANDPEYLLAAAKLVEDKCDAVDLNLGCPQGIAKK 128
Query: 90 GHYGAYLQDDWPLLTEL 106
GHYG++L ++W L+ L
Sbjct: 129 GHYGSFLMEEWDLIHNL 145
Score = 135 (52.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
E CD +D+N+GCPQ +AK+GHYG++L ++W L+ L+
Sbjct: 109 EDKCDAVDLNLGCPQGIAKKGHYGSFLMEEWDLIHNLI 146
Score = 128 (50.1 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 184 IAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 222
+ E CD D+N+GCPQ +AK+GHYG++L ++W L+ L
Sbjct: 107 LVEDKCDAVDLNLGCPQGIAKKGHYGSFLMEEWDLIHNL 145
>ASPGD|ASPL0000054271 [details] [associations]
symbol:AN0956 species:162425 "Emericella nidulans"
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70 EMBL:BN001308
GO:GO:0050660 EMBL:AACD01000014 eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
OrthoDB:EOG480N5B RefSeq:XP_658560.1 ProteinModelPortal:Q5BES4
STRING:Q5BES4 EnsemblFungi:CADANIAT00001695 GeneID:2876733
KEGG:ani:AN0956.2 OMA:GHNTGLA Uniprot:Q5BES4
Length = 563
Score = 189 (71.6 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 31/69 (44%), Positives = 46/69 (66%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLVYSPN 178
+ FC ND + AA+ P+CD +D+N+GCPQ +A+RGHYGA+LQ+DW L+ L+ N
Sbjct: 127 VQFCANDPDDFFNAARHVAPYCDAVDLNLGCPQGIARRGHYGAFLQEDWDLIYKLI---N 183
Query: 179 MVHFVIAEP 187
+H + P
Sbjct: 184 KLHMELEVP 192
Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 22/37 (59%), Positives = 33/37 (89%)
Query: 13 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
P+CD +D+N+GCPQ +A+RGHYGA+LQ+DW L+ +L+
Sbjct: 146 PYCDAVDLNLGCPQGIARRGHYGAFLQEDWDLIYKLI 182
Score = 153 (58.9 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 31 RGHYGAYLQDDWPLLTELVVHFSWVSKNGP--LFMGPLFIAEPHCDGIDINIGCPQMVAK 88
+G YL + + L V F N P F +A P+CD +D+N+GCPQ +A+
Sbjct: 108 KGDDSPYLDGNPAIDRPLFVQFC---ANDPDDFFNAARHVA-PYCDAVDLNLGCPQGIAR 163
Query: 89 RGHYGAYLQDDWPLLTEL 106
RGHYGA+LQ+DW L+ +L
Sbjct: 164 RGHYGAFLQEDWDLIYKL 181
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 24/42 (57%), Positives = 34/42 (80%)
Query: 187 PHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL-GKMAM 227
P+CD D+N+GCPQ +A+RGHYGA+LQ+DW L+ +L K+ M
Sbjct: 146 PYCDAVDLNLGCPQGIARRGHYGAFLQEDWDLIYKLINKLHM 187
>CGD|CAL0004455 [details] [associations]
symbol:orf19.1404 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
CGD:CAL0004455 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:AACQ01000101
EMBL:AACQ01000099 eggNOG:COG0042 HOGENOM:HOG000203649 KO:K05542
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 RefSeq:XP_714575.1
RefSeq:XP_714669.1 ProteinModelPortal:Q59YC2 STRING:Q59YC2
GeneID:3643687 GeneID:3643817 KEGG:cal:CaO19.1404
KEGG:cal:CaO19.8982 Uniprot:Q59YC2
Length = 467
Score = 179 (68.1 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 174
+ FC ND L +AAKL E CD ID+N+GCPQ +A++G YGA+L DDW L+ L+
Sbjct: 122 VQFCANDPDYLLQAAKLIENECDAIDLNLGCPQGIARKGKYGAFLMDDWDLVYKLI 177
Score = 135 (52.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
E CD ID+N+GCPQ +A++G YGA+L DDW L+ +L+
Sbjct: 140 ENECDAIDLNLGCPQGIARKGKYGAFLMDDWDLVYKLI 177
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 68 IAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
+ E CD ID+N+GCPQ +A++G YGA+L DDW L+ +L
Sbjct: 138 LIENECDAIDLNLGCPQGIARKGKYGAFLMDDWDLVYKL 176
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 184 IAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTELGK 224
+ E CD D+N+GCPQ +A++G YGA+L DDW L+ +L K
Sbjct: 138 LIENECDAIDLNLGCPQGIARKGKYGAFLMDDWDLVYKLIK 178
>UNIPROTKB|G4MUR1 [details] [associations]
symbol:MGG_08825 "tRNA-dihydrouridine synthase 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CM001232 KO:K05542
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 RefSeq:XP_003713841.1
ProteinModelPortal:G4MUR1 EnsemblFungi:MGG_08825T0 GeneID:2679811
KEGG:mgr:MGG_08825 Uniprot:G4MUR1
Length = 614
Score = 179 (68.1 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 174
+ FC ND L EAAK P+CD +D+N+GCPQ +A++GHYGA+LQ+D L+ L+
Sbjct: 122 VQFCANDPSALLEAAKHVAPYCDAVDLNLGCPQGIARKGHYGAFLQEDQELIHKLI 177
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 20/37 (54%), Positives = 32/37 (86%)
Query: 13 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
P+CD +D+N+GCPQ +A++GHYGA+LQ+D L+ +L+
Sbjct: 141 PYCDAVDLNLGCPQGIARKGHYGAFLQEDQELIHKLI 177
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 20/36 (55%), Positives = 31/36 (86%)
Query: 71 PHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 106
P+CD +D+N+GCPQ +A++GHYGA+LQ+D L+ +L
Sbjct: 141 PYCDAVDLNLGCPQGIARKGHYGAFLQEDQELIHKL 176
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 20/36 (55%), Positives = 30/36 (83%)
Query: 187 PHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 222
P+CD D+N+GCPQ +A++GHYGA+LQ+D L+ +L
Sbjct: 141 PYCDAVDLNLGCPQGIARKGHYGAFLQEDQELIHKL 176
>WB|WBGene00009452 [details] [associations]
symbol:F36A2.2 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649
KO:K05542 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000075089 EMBL:Z81077 PIR:T21830
RefSeq:NP_492379.1 UniGene:Cel.26704 ProteinModelPortal:Q9XVN8
SMR:Q9XVN8 STRING:Q9XVN8 PaxDb:Q9XVN8 EnsemblMetazoa:F36A2.2
GeneID:185334 KEGG:cel:CELE_F36A2.2 UCSC:F36A2.2 CTD:185334
WormBase:F36A2.2 InParanoid:Q9XVN8 OMA:YLFASQP NextBio:927896
Uniprot:Q9XVN8
Length = 527
Score = 163 (62.4 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTNLV 174
+ FC N A +L E CDG+D+N+GCPQMVAKRG YG++LQD+ L+ +V
Sbjct: 132 VQFCANKVDTFLAACRLVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDEVDLICEMV 187
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 48 LVVHFSWVSKNGPLFMGPLFIAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELG 107
LVV F + F+ + E CDG+D+N+GCPQMVAKRG YG++LQD+ L+ E+
Sbjct: 130 LVVQFC--ANKVDTFLAACRLVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDEVDLICEMV 187
Query: 108 FKTRSH 113
R +
Sbjct: 188 SAVRDY 193
Score = 142 (55.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDDWPLLTELV 49
E CDG+D+N+GCPQMVAKRG YG++LQD+ L+ E+V
Sbjct: 150 EDVCDGVDLNLGCPQMVAKRGRYGSWLQDEVDLICEMV 187
Score = 134 (52.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 184 IAEPHCDGNDINIGCPQMVAKRGHYGAYLQDDWPLLTEL 222
+ E CDG D+N+GCPQMVAKRG YG++LQD+ L+ E+
Sbjct: 148 LVEDVCDGVDLNLGCPQMVAKRGRYGSWLQDEVDLICEM 186
>DICTYBASE|DDB_G0278803 [details] [associations]
symbol:dus1l "tRNA-dihydrouridine synthase 1-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
dictyBase:DDB_G0278803 GO:GO:0005634 Gene3D:3.20.20.70
GenomeReviews:CM000152_GR GO:GO:0050660 EMBL:AAFI02000024
eggNOG:COG0042 KO:K05542 GO:GO:0017150 PANTHER:PTHR11082
RefSeq:XP_641974.1 ProteinModelPortal:Q54XQ6 STRING:Q54XQ6
EnsemblProtists:DDB0238071 GeneID:8621706 KEGG:ddi:DDB_G0278803
OMA:QIARRGN Uniprot:Q54XQ6
Length = 435
Score = 159 (61.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQD 165
+ FCGN+ + + +AAK E HCD ID+N+GCPQ +A+RG+YG++L D
Sbjct: 111 VQFCGNEPEWVVKAAKYIEDHCDAIDLNLGCPQQIARRGNYGSFLLD 157
Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 37 YLQDDWPLLTE---LVVHFSWVSKNGPLFM--GPLFIAEPHCDGIDINIGCPQMVAKRGH 91
Y +D W E LVV F N P ++ +I E HCD ID+N+GCPQ +A+RG+
Sbjct: 95 YRRDYWSTCPEDRPLVVQFCG---NEPEWVVKAAKYI-EDHCDAIDLNLGCPQQIARRGN 150
Query: 92 YGAYLQDDWPLLTELGFKTRSHMCGHSLMFCG-NDSKNLTEAAKLA 136
YG++L D ++ + + H+ +FC NL + KLA
Sbjct: 151 YGSFLLDKPHIILPIVQELHKHI--KVPIFCKIRLLPNLDDTIKLA 194
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 12 EPHCDGIDINIGCPQMVAKRGHYGAYLQDD----WPLLTELVVH 51
E HCD ID+N+GCPQ +A+RG+YG++L D P++ EL H
Sbjct: 129 EDHCDAIDLNLGCPQQIARRGNYGSFLLDKPHIILPIVQELHKH 172
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 156 RGHYGAYLQDDWPLLTNLVYSPNMVHFVIA-----EPHCDGNDINIGCPQMVAKRGHYGA 210
R Y + +D PL+ + N +V+ E HCD D+N+GCPQ +A+RG+YG+
Sbjct: 96 RRDYWSTCPEDRPLVVQ--FCGNEPEWVVKAAKYIEDHCDAIDLNLGCPQQIARRGNYGS 153
Query: 211 YLQDD----WPLLTELGK 224
+L D P++ EL K
Sbjct: 154 FLLDKPHIILPIVQELHK 171
>UNIPROTKB|J3QKP9 [details] [associations]
symbol:DUS1L "tRNA-dihydrouridine(16/17) synthase
[NAD(P)(+)]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC135056 HGNC:HGNC:30086 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 Ensembl:ENST00000578176 Uniprot:J3QKP9
Length = 247
Score = 128 (50.1 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 119 LMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKR 156
+ FC ND + +AA LA+ +CD ID+N+GCPQM+AKR
Sbjct: 78 VQFCANDPEVFVQAALLAQDYCDAIDLNLGCPQMIAKR 115
>UNIPROTKB|F8WEL2 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 Pfam:PF01207 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:AC004839 EMBL:AC002381 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 HGNC:HGNC:21517 IPI:IPI00925668
ProteinModelPortal:F8WEL2 SMR:F8WEL2 Ensembl:ENST00000443233
ArrayExpress:F8WEL2 Bgee:F8WEL2 Uniprot:F8WEL2
Length = 119
Score = 103 (41.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 108 FKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQ 151
F T C + F ND++ L++AA++ P+ +GIDIN GCPQ
Sbjct: 75 FTTNQGDCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQ 118
>UNIPROTKB|I3LP14 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
GeneTree:ENSGT00550000074907 OMA:YLENEHK EMBL:FP565643
Ensembl:ENSSSCT00000023658 Uniprot:I3LP14
Length = 237
Score = 118 (46.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 108 FKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 167
F T C + F ND++ L++AA++ P+ +GIDIN GCPQ A YGA L +
Sbjct: 77 FTTNQGDCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACLINKP 136
Query: 168 PLLTNLV 174
L+ ++V
Sbjct: 137 ELVKDMV 143
>UNIPROTKB|A6QPA8 [details] [associations]
symbol:DUS4L "DUS4L protein" species:9913 "Bos taurus"
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0017150 "tRNA dihydrouridine synthase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 EMBL:DAAA02010587
EMBL:BC149229 IPI:IPI00866854 RefSeq:NP_001095407.1
UniGene:Bt.13512 STRING:A6QPA8 Ensembl:ENSBTAT00000029128
GeneID:511017 KEGG:bta:511017 InParanoid:A6QPA8 OMA:YLENEHK
NextBio:20869728 Uniprot:A6QPA8
Length = 238
Score = 118 (46.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 108 FKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 167
F T C + F ND++ L++AA++ P+ +GIDIN GCPQ A YGA L +
Sbjct: 75 FTTNQGDCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWALAEGYGACLINKP 134
Query: 168 PLLTNLV 174
L+ ++V
Sbjct: 135 ELVRDMV 141
>UNIPROTKB|E2RRJ8 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AAEX03011212 RefSeq:XP_540383.2
Ensembl:ENSCAFT00000006298 GeneID:483264 KEGG:cfa:483264
Uniprot:E2RRJ8
Length = 317
Score = 119 (46.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 108 FKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 167
F T C + F ND++ L++AA++ P+ +GIDIN GCPQ A YGA L +
Sbjct: 75 FTTNQGDCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINKP 134
Query: 168 PLLTNLV 174
L+ ++V
Sbjct: 135 ELVRDMV 141
>UNIPROTKB|O95620 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CH471070 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:U62767 EMBL:AK297195
EMBL:BC111774 IPI:IPI00021410 IPI:IPI00783809 RefSeq:NP_001257348.1
RefSeq:NP_853559.1 UniGene:Hs.97627 ProteinModelPortal:O95620
SMR:O95620 STRING:O95620 PaxDb:O95620 PRIDE:O95620
Ensembl:ENST00000265720 Ensembl:ENST00000402620 GeneID:11062
KEGG:hsa:11062 UCSC:uc003veh.3 CTD:11062 GeneCards:GC07P107203
HGNC:HGNC:21517 HPA:HPA044301 neXtProt:NX_O95620
PharmGKB:PA142671939 HOVERGEN:HBG053313 InParanoid:O95620 KO:K05545
OMA:AGPMVRY OrthoDB:EOG4ZCT4T PhylomeDB:O95620 GenomeRNAi:11062
NextBio:42037 ArrayExpress:O95620 Bgee:O95620 CleanEx:HS_DUS4L
Genevestigator:O95620 GermOnline:ENSG00000105865 Uniprot:O95620
Length = 317
Score = 119 (46.9 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 108 FKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 167
F T C + F ND++ L++AA++ P+ +GIDIN GCPQ A YGA L +
Sbjct: 75 FTTNQGDCPLIVQFAANDARLLSDAARIVCPYANGIDINCGCPQRWAMAEGYGACLINKP 134
Query: 168 PLLTNLV 174
L+ ++V
Sbjct: 135 ELVQDMV 141
>MGI|MGI:1919166 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 MGI:MGI:1919166 Gene3D:3.20.20.70
GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313
KO:K05545 OrthoDB:EOG4ZCT4T EMBL:AK010138 EMBL:BC109351
IPI:IPI00109359 RefSeq:NP_082278.1 UniGene:Mm.62979
ProteinModelPortal:Q32M08 SMR:Q32M08 STRING:Q32M08 PRIDE:Q32M08
Ensembl:ENSMUST00000020977 GeneID:71916 KEGG:mmu:71916
UCSC:uc007nhr.1 GeneTree:ENSGT00550000074907 InParanoid:Q32M08
NextBio:334944 Bgee:Q32M08 CleanEx:MM_DUS4L Genevestigator:Q32M08
GermOnline:ENSMUSG00000020648 Uniprot:Q32M08
Length = 324
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 108 FKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 167
F T C + F ND++ L++AA L P+ +GIDIN GCPQ A YGA L +
Sbjct: 75 FTTNQGDCPLIVQFAANDARLLSDAALLVCPYANGIDINCGCPQRWAMADGYGACLINKP 134
Query: 168 PLLTNLV 174
L+ ++V
Sbjct: 135 ELVHDMV 141
>UNIPROTKB|D4A0T1 [details] [associations]
symbol:Dus4l "Protein Dus4l" species:10116 "Rattus
norvegicus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
RGD:1311445 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CH473947
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 IPI:IPI00951041
RefSeq:NP_001129275.1 UniGene:Rn.41975 Ensembl:ENSRNOT00000068419
GeneID:366593 KEGG:rno:366593 NextBio:689691 Uniprot:D4A0T1
Length = 321
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 108 FKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 167
F T C + F ND++ L++AA + P+ GIDIN GCPQ A YGA L +
Sbjct: 75 FTTNQGDCPLIVQFAANDARLLSDAALIVCPYASGIDINCGCPQRWAMADGYGACLINKP 134
Query: 168 PLLTNLV 174
L+ ++V
Sbjct: 135 ELVLDMV 141
>RGD|1311445 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 RGD:1311445 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
IPI:IPI00914747 ProteinModelPortal:D4A3L7
Ensembl:ENSRNOT00000011068 UCSC:RGD:1311445 ArrayExpress:D4A3L7
Uniprot:D4A3L7
Length = 324
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 108 FKTRSHMCGHSLMFCGNDSKNLTEAAKLAEPHCDGIDINIGCPQMVAKRGHYGAYLQDDW 167
F T C + F ND++ L++AA + P+ GIDIN GCPQ A YGA L +
Sbjct: 75 FTTNQGDCPLIVQFAANDARLLSDAALIVCPYASGIDINCGCPQRWAMADGYGACLINKP 134
Query: 168 PLLTNLV 174
L+ ++V
Sbjct: 135 ELVLDMV 141
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.142 0.480 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 240 240 0.00093 113 3 12 22 0.41 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 542 (58 KB)
Total size of DFA: 147 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 13.23u 0.10s 13.33t Elapsed: 00:00:05
Total cpu time: 13.24u 0.10s 13.34t Elapsed: 00:00:06
Start: Thu Aug 15 15:13:24 2013 End: Thu Aug 15 15:13:30 2013