Query psy7348
Match_columns 229
No_of_seqs 114 out of 658
Neff 8.2
Searched_HMMs 29240
Date Sat Aug 17 00:27:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7348.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7348hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e8t_A Takeout 1, takeout-like 100.0 2.8E-58 9.5E-63 381.3 28.9 216 1-225 2-219 (220)
2 2rck_A JuvenIle hormone bindin 100.0 1.3E-47 4.3E-52 318.0 21.2 196 1-221 3-204 (225)
3 2rqf_A HJHBP, hemolymph juvenI 100.0 5.1E-41 1.8E-45 278.6 21.9 213 1-226 4-225 (227)
4 3uv1_A DER F 7 allergen; super 99.4 2.8E-11 9.6E-16 97.6 18.2 177 14-212 11-194 (196)
5 1ewf_A BPI, bactericidal/perme 98.3 0.00017 5.7E-09 64.8 21.5 165 43-221 30-196 (456)
6 2obd_A Cholesteryl ester trans 98.1 0.00035 1.2E-08 63.2 20.0 163 44-220 37-203 (476)
7 3h4z_A Maltose-binding peripla 98.0 0.00067 2.3E-08 62.6 19.2 165 38-218 395-566 (568)
8 3e8t_A Takeout 1, takeout-like 91.7 4.1 0.00014 32.2 14.2 36 174-209 176-211 (220)
9 2rqf_A HJHBP, hemolymph juvenI 70.5 38 0.0013 26.8 11.7 65 157-221 144-213 (227)
10 4fxt_A Uncharacterized protein 41.8 46 0.0016 26.2 5.4 39 71-123 35-73 (202)
11 2ejx_A ST0812; arcaea, unknown 39.4 82 0.0028 23.2 6.1 28 103-131 47-74 (139)
12 2g5x_A Lychnin, ribosome-inact 34.0 34 0.0012 27.5 3.6 28 17-44 11-39 (234)
13 3uv1_A DER F 7 allergen; super 32.1 1.7E+02 0.0057 22.2 8.8 44 170-217 152-195 (196)
14 1wuc_A Bouganin; alpha-beta pr 31.5 47 0.0016 27.0 4.0 28 18-45 15-42 (250)
15 2hv8_D RAB11 family-interactin 29.2 91 0.0031 19.7 4.2 53 166-219 4-58 (64)
16 3ctk_A RIP;, rRNA N-glycosidas 28.7 47 0.0016 26.8 3.6 26 19-44 14-39 (248)
17 2ljs_A Trypsin inhibitor 3; be 23.5 12 0.0004 19.6 -0.6 17 2-18 5-21 (30)
18 3n54_B Spore germination prote 23.3 2.6E+02 0.0089 23.1 7.5 53 143-196 242-296 (350)
19 2e2f_A Diapausin; Ca-channel b 23.1 42 0.0014 18.8 1.6 16 6-21 9-24 (41)
20 3eud_A Protein SHQ1; CS domain 22.2 40 0.0014 24.0 1.7 27 43-69 13-39 (115)
21 1xhj_A Nitrogen fixation prote 21.1 61 0.0021 21.8 2.5 22 10-31 3-24 (88)
22 3hn5_A Putative exported prote 20.6 1.1E+02 0.0036 24.3 4.1 18 100-123 61-78 (215)
23 3ktz_A Ribosome-inactivating p 20.2 45 0.0015 27.0 1.9 29 17-45 15-43 (251)
No 1
>3e8t_A Takeout 1, takeout-like protein 1; transport protein; HET: UQ8; 1.30A {Epiphyas postvittana} PDB: 3e8w_A*
Probab=100.00 E-value=2.8e-58 Score=381.26 Aligned_cols=216 Identities=18% Similarity=0.350 Sum_probs=208.5
Q ss_pred CCCCCcccCCCCCChhhHHHHHHHHHHHhhcCCCCCCCCCCCCceeeCeEEEeeCCCceEEEEEEEeeEEecccceEEEE
Q psy7348 1 MAEYIHPCTKASPKINDCIKQTFNHLRKYLIQGIDEIAVPSIEPLIIPAMKMENGHGAVRVRAIFSNLTIHGASNYTVLN 80 (229)
Q Consensus 1 ~p~~~~~C~~~dp~l~~Cl~~~~~~~~~~~~~Gip~lgip~ldPl~i~~~~i~~~~~~~~~~~~~~n~~v~Gls~~~i~~ 80 (229)
||+ +++|+|+| ++|+++++|+++|+|++|+||+|+||+||+.+++++++.+ +++++++|++++|+++++|++
T Consensus 2 lP~-i~~C~~~d---~~Ci~~~i~~~~~~l~~GiPelgip~ldPl~i~~~~i~~~----~~~~~~~n~~i~Gls~~~i~~ 73 (220)
T 3e8t_A 2 VLP-VEKCNLED---SACMTSAFQQALPTFVAGLPDHGVEVMDVLDLDDFAFDLS----GLQFTLKEGKLKGLKGAVIDN 73 (220)
T ss_dssp ----CCCCBTTC---HHHHHHHHHHHHHHHHTCBGGGTBCCBTTEEECCEEEEET----TEEEEEEEEEEECGGGCEEEE
T ss_pred CCC-CcccCCCh---HHHHHHHHHHHHHHhcCCCcccCCCCCCceeeeeEEEecC----cEEEEEEeeEEEcCCceEEEE
Confidence 699 99999999 9999999999999999999999999999999999999885 389999999999999999999
Q ss_pred EEEcCCCcEEEEEEEecEEEEEEEEEEEEEEEEEEeeeeceeeEEeceeEEEEEEEEEEEee-CCeeEEEEEEeEEEEEe
Q psy7348 81 VKSDLNKYRIDLALHLPHIEVTGNYDVNGNVLLFPVRSRGDFWAAFGNVTGLAKLYATEQLR-NETKFMKTERLGIQFKL 159 (229)
Q Consensus 81 ~~~~~~~~~~~~~~~~P~l~~~g~Y~~~g~i~~~pi~g~G~~~~~~~~~~~~~~~~~~~~~~-~g~~~l~i~~~~~~~~i 159 (229)
+++++++.++.+++++ ++.++|+|+++|+++.+|+.|+|+++++++|+++.+++++..+.+ +|++|++++++++++++
T Consensus 74 ~~~~~~~~~~~~~~~~-~l~~~g~Y~~~g~il~lpi~g~G~~~~~l~n~~~~~~~~~~~~~~~~G~~yl~i~~~~~~~~~ 152 (220)
T 3e8t_A 74 VKWDLKKKNIEVDFHL-DATVKGHYTAGGRILILPITGDGQMKLKLKNIHIHLVVSYEMEKDAEGVDHVIFKKYTVTFDV 152 (220)
T ss_dssp EEEETTTTEEEEEEEE-EEEEEEEEEEEEEETTEECCEEEEEEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEEcCCCcEEEEEEEE-EEEEEEEEEEeeEEEEEEEecCccEEEEEeeeEEEEEEEEEEEEecCCCEEEEEEEEEEEEEE
Confidence 9999999999999999 999999999999999999999999999999999999999999888 99999999999999999
Q ss_pred -ceEEEEEcccCCCchHHHHHHHHHhhhcHHHHHHHhcHHHHHHHHHHHHHHHHHHhccCCcccccc
Q psy7348 160 -SKSNFKIKDFINRNNVIGEAMNIFLNQNAAEIIEEMKPAASAAIGKHFKSFLNAAFLQIPLKVWLR 225 (229)
Q Consensus 160 -~~~~~~l~nl~~g~~~l~~~~n~~iN~n~~~i~~~~~p~i~~~~~~~~~~~~N~i~~~~p~~~f~~ 225 (229)
++++++++|||+||++|++++|+|+|+||++++++++|.|++++++++++++|++|+++|++++|+
T Consensus 153 ~~~~~~~~~nLfng~~~L~~~~n~~iN~nw~~i~~e~~p~i~~~~~~~~~~i~n~if~~~p~~~lF~ 219 (220)
T 3e8t_A 153 KDNAQFGLTNLFNGNKELSDTMLTFLNQNWKQVSEEFGKPVMEAAAKKIFKNIKHFLAKVPIAEIAN 219 (220)
T ss_dssp EEEEEEEESSBGGGCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHSB
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999998875
No 2
>2rck_A JuvenIle hormone binding protein; hemolymph, JHBP-fold; HET: NAG; 2.44A {Galleria mellonella}
Probab=100.00 E-value=1.3e-47 Score=318.02 Aligned_cols=196 Identities=12% Similarity=0.242 Sum_probs=187.7
Q ss_pred CCCCCcccCCCCCChhhHHHHHHHHHHHhhcCCCCCCCCCCCCceeeCeEEEeeCCCceEEEEEEEeeEEecccceEEEE
Q psy7348 1 MAEYIHPCTKASPKINDCIKQTFNHLRKYLIQGIDEIAVPSIEPLIIPAMKMENGHGAVRVRAIFSNLTIHGASNYTVLN 80 (229)
Q Consensus 1 ~p~~~~~C~~~dp~l~~Cl~~~~~~~~~~~~~Gip~lgip~ldPl~i~~~~i~~~~~~~~~~~~~~n~~v~Gls~~~i~~ 80 (229)
+|+++++|+|+|| +|+++++|+++|+|++|+||+|+||+||+.++++++.. +.++++++|+|++++|+++++|++
T Consensus 3 ~p~~i~~C~~~dp---~Ci~~~i~~l~~~~~~GiPel~ip~ldPl~i~~~~i~~--g~~~~~~~~~n~~i~Gls~~~I~~ 77 (225)
T 2rck_A 3 LNLSTEPCDVSDI---ECISKATQVFLDNTYQGIPEYNIKKLDPITIPSLEKSI--EKINLNVRYNNLKVTGFKNQKISH 77 (225)
T ss_dssp SCCCCCCCCTTCH---HHHHHHHHHHHHHHTTCBGGGTBCCCSSEEEEEEEEEE--TTTTEEEEEEEEEEECGGGCEEEE
T ss_pred CCCCCCcCCCCCh---HHHHHHHHHHHHHhcCCCcccCCCCcCceecCceEEEe--CceEEEEEEEeeEEEcCCCcEEEE
Confidence 6999999999997 49999999999999999999999999999999999998 566799999999999999999999
Q ss_pred EEEcCCCcEEEEEEEecEEEEEEEEEEEEEEEE-EEeeee---ceeeEEeceeEEEEEEEEEEEee-CCeeEEEEEEeEE
Q psy7348 81 VKSDLNKYRIDLALHLPHIEVTGNYDVNGNVLL-FPVRSR---GDFWAAFGNVTGLAKLYATEQLR-NETKFMKTERLGI 155 (229)
Q Consensus 81 ~~~~~~~~~~~~~~~~P~l~~~g~Y~~~g~i~~-~pi~g~---G~~~~~~~~~~~~~~~~~~~~~~-~g~~~l~i~~~~~ 155 (229)
+++|+.+.++ ++.++|+|+++|+++. +|+.|+ |+++++++ +++.+++++..+.+ +|++|++++++++
T Consensus 78 ~~~d~~~~~~-------~l~~~g~Y~~~g~il~~lpi~g~~~~G~~~~~l~-~~~~~~~~~~~~~~~~G~~yl~v~~~~v 149 (225)
T 2rck_A 78 FTLVRDTKAV-------NFKTKVNFTAEGKLVIELPKSSKTYTGEVTIEAS-AEGGAAYSYSVKTDDKGVEHYEAGPETV 149 (225)
T ss_dssp EEEETTTTEE-------EEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEE-EEEEEEEEEEEECCSSSCCEEEECCCEE
T ss_pred EEEecCCCEE-------EEEEEEEEEEeeEEEEEEEecccccccceEEEEE-EEEEEEEEEEEEEecCCeEEEEEEEEEE
Confidence 9999998876 8999999999999998 999999 99999999 99999999998888 9999999999999
Q ss_pred EEE-eceEEEEEcccCCCchHHHHHHHHHhhhcHHHHHHHhcHHHHHHHHHHHHHHHHHHhccCCcc
Q psy7348 156 QFK-LSKSNFKIKDFINRNNVIGEAMNIFLNQNAAEIIEEMKPAASAAIGKHFKSFLNAAFLQIPLK 221 (229)
Q Consensus 156 ~~~-i~~~~~~l~nl~~g~~~l~~~~n~~iN~n~~~i~~~~~p~i~~~~~~~~~~~~N~i~~~~p~~ 221 (229)
+++ +|++++++ ++++|+++|+||+ +++++|.+++.+++++++++|++|++++++
T Consensus 150 ~~~~ig~~~~~~----------~~~~n~~iN~nw~--~~~ikP~i~~~~~~~~~~i~N~if~~~~~~ 204 (225)
T 2rck_A 150 SCEIFGEPTLSV----------SSTLEDALKLDSD--FKKIFTEYGKQLTEGRKQTACRIVETVYAV 204 (225)
T ss_dssp EEEECSCCEEEE----------CHHHHHHHHTCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCcEEEEH----------HHHHHHHHHhCcc--hhhhhHHHHHHHHHHHHHHHHHHHHhCcHh
Confidence 997 99999998 5899999999999 999999999999999999999999999887
No 3
>2rqf_A HJHBP, hemolymph juvenIle hormone binding protein; HET: JH3; NMR {Bombyx mori} PDB: 3a1z_A 3aos_A* 3aot_A*
Probab=100.00 E-value=5.1e-41 Score=278.60 Aligned_cols=213 Identities=14% Similarity=0.242 Sum_probs=184.2
Q ss_pred CCCCCcccCCCCCChhhHHHHHHHHHHHhhcCCCCCCCCCCCCceeeCeEEEeeCCCceEEEEEEEeeEEecccceEEEE
Q psy7348 1 MAEYIHPCTKASPKINDCIKQTFNHLRKYLIQGIDEIAVPSIEPLIIPAMKMENGHGAVRVRAIFSNLTIHGASNYTVLN 80 (229)
Q Consensus 1 ~p~~~~~C~~~dp~l~~Cl~~~~~~~~~~~~~Gip~lgip~ldPl~i~~~~i~~~~~~~~~~~~~~n~~v~Gls~~~i~~ 80 (229)
.|+++++|+|+| .+|+++++|+++|+|++|+||+||||+||+.++++++..+ +.++++++|+|++++|+++++|++
T Consensus 4 ~~~~i~~C~r~d---~~Ci~~~i~~~~~~l~~GiPel~ip~ldPl~i~~~~i~~~-~~~~~~~~~~n~~i~Gls~~~I~~ 79 (227)
T 2rqf_A 4 GDALLKPCKLGD---MQCLSSATEQFLEKTSKGIPQYDIWPIDPLVVTSLDVIAP-SDAGIVIRFKNLNITGLKNQQISD 79 (227)
T ss_dssp CSCSCCCBCTTC---HHHHHHHHHHHHHHHTTCBTTTTBCCCSSEEESCEEEEET-TTSCEEEEEEEEEEESCTTCEEEE
T ss_pred CCCCCCcCCCCC---hHHHHHHHHHHHHHhcCCCcccCCCCCCcEecccEEEEcC-CceEEEEEEEEeEEEcccceEEEE
Confidence 589999999999 5999999999999999999999999999999999999996 678899999999999999999999
Q ss_pred EEEcCCCcEEEEEEEecEEEEEEEEEEEEEEEE-EEeee---eceeeEEeceeEEEEEEEEEEE-eeCCeeEEEEEEeEE
Q psy7348 81 VKSDLNKYRIDLALHLPHIEVTGNYDVNGNVLL-FPVRS---RGDFWAAFGNVTGLAKLYATEQ-LRNETKFMKTERLGI 155 (229)
Q Consensus 81 ~~~~~~~~~~~~~~~~P~l~~~g~Y~~~g~i~~-~pi~g---~G~~~~~~~~~~~~~~~~~~~~-~~~g~~~l~i~~~~~ 155 (229)
+++++++.++.+ .+.|+|+++|+++. +|+.| +|.++++++ +++++++.+..+ .++|++|++++++++
T Consensus 80 ~~~d~~~~~~~l-------~~~~~y~i~G~y~l~lp~~~g~~~G~~~itl~-v~~~~~~~~~~~~~~~G~~yl~i~~~~v 151 (227)
T 2rqf_A 80 FQMDTKAKTVLL-------KTKADLHIVGDIVIELTEQSKSFTGLYTADTN-VIGAVRYGYNLKNDDNGVQHFEVQPETF 151 (227)
T ss_dssp EEEETTTTEEEE-------EEEEEEEEEEEEEEEETTTTEEEEEEEEEEEE-EEEEEEEEEEEEECSSSCEEEEECCCEE
T ss_pred EEEccCCcEEEE-------EEEEEEEEEEEEEEEEecCCCceEEEEEEEEE-EEEEEEEEEEEEEccCCeEEEEEEEEEE
Confidence 999999998864 44557888888776 88776 577777777 888888888876 459999999999999
Q ss_pred -EEEeceEEEEEcccCCCchHHHHHHHHHhhhcHHHHHHHhcHHHHHHHHHHHHHHHH---HHhccCCccccccC
Q psy7348 156 -QFKLSKSNFKIKDFINRNNVIGEAMNIFLNQNAAEIIEEMKPAASAAIGKHFKSFLN---AAFLQIPLKVWLRD 226 (229)
Q Consensus 156 -~~~i~~~~~~l~nl~~g~~~l~~~~n~~iN~n~~~i~~~~~p~i~~~~~~~~~~~~N---~i~~~~p~~~f~~d 226 (229)
..++|+++++++++++ +..+.+.+|+++...|+...+..++.|.+.+++.+.+++| +.|..+|++.||.|
T Consensus 152 ~~~~ig~~~~~l~~~l~-~~~~~d~~n~~~~~~y~~~~~~~~~~i~~ive~~~~~v~~~~~~~~~~~p~~~~~~~ 225 (227)
T 2rqf_A 152 TCESIGEPKITLSSDLS-SALEKDSGNNSLEPDMEPLKTLRQAAICKIAEACYISVVHNIRASAKILPASSFFEN 225 (227)
T ss_dssp EEEECSSCEEEECHHHH-HHHHHHHTCSSCCTTSSSHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHSCSTTTBSC
T ss_pred EeEEeccEEEEcchhhh-hhhhhchhHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhhc
Confidence 7799999999997764 3444455555444455566677789999999999999999 99999999999987
No 4
>3uv1_A DER F 7 allergen; super-roll; 2.00A {Dermatophagoides farinae}
Probab=99.40 E-value=2.8e-11 Score=97.60 Aligned_cols=177 Identities=11% Similarity=0.169 Sum_probs=117.3
Q ss_pred ChhhHHHHHHHHHHHhhcCCCCCCCCCCCCceeeCeEEEeeC--CCce--EEEEEEEeeEEecccceE-EEEEEEcCCC-
Q psy7348 14 KINDCIKQTFNHLRKYLIQGIDEIAVPSIEPLIIPAMKMENG--HGAV--RVRAIFSNLTIHGASNYT-VLNVKSDLNK- 87 (229)
Q Consensus 14 ~l~~Cl~~~~~~~~~~~~~Gip~lgip~ldPl~i~~~~i~~~--~~~~--~~~~~~~n~~v~Gls~~~-i~~~~~~~~~- 87 (229)
++|+++-+++..+++. +.+||+.+|+++.+.. .+.+ ..++.++|.+++|||++. .-++.+....
T Consensus 11 ~~N~~vD~~l~~~~~~----------~~lDP~~lpd~~~~f~~~~g~~~~~g~~~l~ng~l~GLSs~~R~Gd~~~~~~~~ 80 (196)
T 3uv1_A 11 EINKAIDDAIAAIEQS----------ETIDPMKVPDHADKFERHVGILDFKGELAMRNIEARGLKQMKRQGDANVKGEEG 80 (196)
T ss_dssp HHHHHHHHHHHHHHTS----------SSSSSEEECCEEEEEEEECSSSEEEEEEEEEEEEEECGGGEEESSSCEEEEETT
T ss_pred HHHHHHHHHHHHHHhh----------cCCCCeecCccccccccccceEeeEEEEEEEEEEEEccccEEEccceEEEEcCC
Confidence 3566666666665532 3589999999876543 3433 456789999999999984 4444444444
Q ss_pred -cEEEEEEEecEEEEEEEEEEEEEEEEEEeeeeceeeEEeceeEEEEEEEEEEEeeCCeeEEEEEEeEEEEEeceEEEEE
Q psy7348 88 -YRIDLALHLPHIEVTGNYDVNGNVLLFPVRSRGDFWAAFGNVTGLAKLYATEQLRNETKFMKTERLGIQFKLSKSNFKI 166 (229)
Q Consensus 88 -~~~~~~~~~P~l~~~g~Y~~~g~i~~~pi~g~G~~~~~~~~~~~~~~~~~~~~~~~g~~~l~i~~~~~~~~i~~~~~~l 166 (229)
.++.+.+-+..+.+.++|++...+. .+.+.|...+++.++++.+.+... .+| ++++++++++ +++++++++
T Consensus 81 ~~~~~~~vg~~~~~v~~~y~~~~~~~--~~~~~g~v~~~i~~~~v~~~~~~~---~~~--~~~l~~f~i~-~l~~i~v~~ 152 (196)
T 3uv1_A 81 IVKAHLLIGVHDDIVSMEYDLAYKLG--DLHPTTHVISDIQDFVVALSLEIP---DEG--NITMTSFEVR-QFANVVNHI 152 (196)
T ss_dssp EEEEEEEEEESSSCEEEEEEEEEEBT--TBCCEEEEEEEEETCEEEEEEEEE---SSS--CCEEEEEEEC-CCSEEEEEE
T ss_pred eEEEEEEeeeceeEEEEEEEEEEEEc--ccCCcEEEEEEEEEEEEEEEEEEc---CCC--ceeeceecee-eecceEEEE
Confidence 4555555555678888888886643 357889999999999888777664 355 3788998887 899999999
Q ss_pred cccCCCchHHHHHHHHHhhhcHHHHHHHhcHHHHHHHHHHHHHHHH
Q psy7348 167 KDFINRNNVIGEAMNIFLNQNAAEIIEEMKPAASAAIGKHFKSFLN 212 (229)
Q Consensus 167 ~nl~~g~~~l~~~~n~~iN~n~~~i~~~~~p~i~~~~~~~~~~~~N 212 (229)
+++=.-|..++.+++-+.| .+-..+++.|++.+.+.+.+-++
T Consensus 153 ~Glg~ld~l~~~i~n~~~~----l~~~~I~~~ie~~v~~~i~~~l~ 194 (196)
T 3uv1_A 153 GGLSILDPIFGVLSDVLTA----IFQDTVRKEMTKVLAPAFKRELE 194 (196)
T ss_dssp TTCCTTSHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCcchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhc
Confidence 9974334444444444443 34444455555555555544443
No 5
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=98.29 E-value=0.00017 Score=64.76 Aligned_cols=165 Identities=11% Similarity=0.156 Sum_probs=108.0
Q ss_pred CceeeCeEEEeeCCCc-eEEEEEEEeeEEecccceEEEEEEEcCCCcEEEEEEEecEEEEEEEEEEEEEEEEEEeeeece
Q psy7348 43 EPLIIPAMKMENGHGA-VRVRAIFSNLTIHGASNYTVLNVKSDLNKYRIDLALHLPHIEVTGNYDVNGNVLLFPVRSRGD 121 (229)
Q Consensus 43 dPl~i~~~~i~~~~~~-~~~~~~~~n~~v~Gls~~~i~~~~~~~~~~~~~~~~~~P~l~~~g~Y~~~g~i~~~pi~g~G~ 121 (229)
.++.+|+++-+..-.. -.+...++|+++..++--.. ++++.+ ...+.+.+.--.+.++|+|++.-.+ ++-.|.
T Consensus 30 ~~~~iPdi~~~~~~~~~g~~~~~ls~i~I~~~~~~~~-~l~~~p-~~gi~l~i~~~~~~l~~~~~~~~~~----i~~~G~ 103 (456)
T 1ewf_A 30 KRIKIPDYSDSFKIKHLGKGHYSFYSMDIREFQLPSS-QISMVP-NVGLKFSISNANIKISGKWKAQKRF----LKMSGN 103 (456)
T ss_dssp TTCCCCCEEEECSCSSSSSCEEEEEEEEEEEEECCCE-EEEEET-TTEEEEEEEEEEEEEEEEEEEEETT----EEEEEE
T ss_pred hcCCCCCccCceeccccceEEEEEEEEEEEEEecCCc-eEEECC-CCEEEEEEeCCcEEEEEEEEEEEEE----EeeeeE
Confidence 4456666665542110 02456777777776665442 555543 3455555554467788887776532 456789
Q ss_pred eeEEeceeEEEEEEEEEEEee-CCeeEEEEEEeEEEEEeceEEEEEcccCCCchHHHHHHHHHhhhcHHHHHHHhcHHHH
Q psy7348 122 FWAAFGNVTGLAKLYATEQLR-NETKFMKTERLGIQFKLSKSNFKIKDFINRNNVIGEAMNIFLNQNAAEIIEEMKPAAS 200 (229)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~-~g~~~l~i~~~~~~~~i~~~~~~l~nl~~g~~~l~~~~n~~iN~n~~~i~~~~~p~i~ 200 (229)
+++.++++.+++.+.... +. +|+. ++...+...+++++++++.+ | .++-..|-|.+.--..+-+.++..+.
T Consensus 104 ~~~~v~~v~i~~~~~l~~-~~~~G~~--~v~~~~C~~~~~~~~i~~~g---~--~~~~l~n~f~~~i~~~i~~~l~~~iC 175 (456)
T 1ewf_A 104 FDLSIEGMSISADLKLGS-NPTSGKP--TITCSSCSSHINSVHVHISK---S--KVGWLIQLFHKKIESALRNKMNSQVC 175 (456)
T ss_dssp EEEEEEEEEEEEEEEEEE-ETTTTEE--EEEEEEEEEECCEEEEECSC---G--GGHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred EEEEEeeEEEEEEEEEee-cCCCCce--EEEEecCceEeceEEEEEeC---C--chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888875 44 7874 55555556788999998743 2 13333344443334557777788888
Q ss_pred HHHHHHHHHHHHHHhccCCcc
Q psy7348 201 AAIGKHFKSFLNAAFLQIPLK 221 (229)
Q Consensus 201 ~~~~~~~~~~~N~i~~~~p~~ 221 (229)
..+.+.+.+.+|..+.++|..
T Consensus 176 ~~i~~~v~~~ln~~L~~lp~~ 196 (456)
T 1ewf_A 176 EKVTNSVSSELQPYFQTLPVM 196 (456)
T ss_dssp HHHHHHHHHTHHHHHTTSCSE
T ss_pred HHHHHHHHHHHHHHHhhCCce
Confidence 888877888899999999854
No 6
>2obd_A Cholesteryl ester transfer protein; lipid transfer protein, lipid transport; HET: NDG FU4 2OB PCW EPE 1PE PG4; 2.10A {Homo sapiens}
Probab=98.12 E-value=0.00035 Score=63.18 Aligned_cols=163 Identities=10% Similarity=0.011 Sum_probs=98.9
Q ss_pred ceeeCeEEEeeCCC-ceEEEEEEEeeEEecccceEEEEEEEcCCCcEEEEEEEecEEEEEEEEEEEEE-EEEEEeeeece
Q psy7348 44 PLIIPAMKMENGHG-AVRVRAIFSNLTIHGASNYTVLNVKSDLNKYRIDLALHLPHIEVTGNYDVNGN-VLLFPVRSRGD 121 (229)
Q Consensus 44 Pl~i~~~~i~~~~~-~~~~~~~~~n~~v~Gls~~~i~~~~~~~~~~~~~~~~~~P~l~~~g~Y~~~g~-i~~~pi~g~G~ 121 (229)
|+.+|+++-...-. .-.+...++|+++..++--. .++++.+ ..-+.+.+.--.+.++|+|++.-. -++ ++..|.
T Consensus 37 ~i~iPdi~g~~~i~~~G~~~y~ls~ikI~~~~~~~-~~l~~~p-~~gi~l~i~~~~i~l~g~w~~~~~~~~~--i~~~G~ 112 (476)
T 2obd_A 37 RASYPDITGEKAMMLLGQVKYGLHNIQISHLSIAS-SQVELVE-AKSIDVSIQDVSVVFKGTLKYGYTTAWW--LGIDQS 112 (476)
T ss_dssp HCCCCCEEEEEEETTTEEEEEEEEEEEEEEEEEEE-EEEEEET-TTEEEEEEEEEEEEEEEEEEEEESSCGG--GCSCEE
T ss_pred cCCCCCCCCceeccccceEEEEEEEEEEEEEEcCC-ceEEECC-CCeEEEEEeCCEEEEEEEEEEEeccCcE--EecceE
Confidence 33455555443211 11255667777777666432 2334433 455566666557888898888742 011 677899
Q ss_pred eeEEec-eeEEEEEEEEEEEeeCCeeEEEEEEeEEEEEeceEEEEEcccC-CCchHHHHHHHHHhhhcHHHHHHHhcHHH
Q psy7348 122 FWAAFG-NVTGLAKLYATEQLRNETKFMKTERLGIQFKLSKSNFKIKDFI-NRNNVIGEAMNIFLNQNAAEIIEEMKPAA 199 (229)
Q Consensus 122 ~~~~~~-~~~~~~~~~~~~~~~~g~~~l~i~~~~~~~~i~~~~~~l~nl~-~g~~~l~~~~n~~iN~n~~~i~~~~~p~i 199 (229)
+++.++ ++.+++.+... ..+|+ .++...+.+..++++++++.+-. + ..+.....+++ -+.+-+.++..+
T Consensus 113 ~~~~v~~gv~i~~~~~L~--~~~G~--~~v~~~~C~~~i~~v~v~~~g~~lp--s~l~n~f~~~i---~~~i~~~l~~~i 183 (476)
T 2obd_A 113 IDFEIDSAIDLQINTQLT--ADSGR--VRTDAPDCYLSFHKLLLHLQGEREP--GWIKQLFTNFI---SFTLKLVLKGQI 183 (476)
T ss_dssp EEEEEEEEEEEEEEEEEE--EETTE--EEEEEEEEEEEEEEEEEEETTCCCC--SSHHHHHHHHT---HHHHHHHHHHHH
T ss_pred EEEEEecCEEEEEEEEEe--cCCCc--EEEEEcccEEEeeeEEEEEECCcch--hHHHHHHHHHH---HHHHHHHHHHHH
Confidence 999999 99999988887 46886 56666666788889999987521 1 23444444444 344555555555
Q ss_pred HHHHHHHHHHHHHHHhccCCc
Q psy7348 200 SAAIGKHFKSFLNAAFLQIPL 220 (229)
Q Consensus 200 ~~~~~~~~~~~~N~i~~~~p~ 220 (229)
...+.+.+.. +|..+.++|.
T Consensus 184 C~~i~~~i~~-ln~~L~tlp~ 203 (476)
T 2obd_A 184 CKEINVISNI-MADFVQTRAA 203 (476)
T ss_dssp HHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHhhCcE
Confidence 5555555555 6666666654
No 7
>3h4z_A Maltose-binding periplasmic protein fused with Al DERP7; MBP fusion, AHA1/BPI domain-like, super roll, sugar T transport, allergen; HET: GLC; 2.35A {Escherichia coli}
Probab=97.97 E-value=0.00067 Score=62.57 Aligned_cols=165 Identities=9% Similarity=0.101 Sum_probs=104.3
Q ss_pred CCCCCCceeeCeEEEeeCC--C--ceEEEEEEEeeEEecccceE-EEEEEEcCCCcEEEEEEEecEEE--EEEEEEEEEE
Q psy7348 38 AVPSIEPLIIPAMKMENGH--G--AVRVRAIFSNLTIHGASNYT-VLNVKSDLNKYRIDLALHLPHIE--VTGNYDVNGN 110 (229)
Q Consensus 38 gip~ldPl~i~~~~i~~~~--~--~~~~~~~~~n~~v~Gls~~~-i~~~~~~~~~~~~~~~~~~P~l~--~~g~Y~~~g~ 110 (229)
-.|.+||+.++........ + .....+.++|..++||+..+ .-+.-+..+...+++.+++--.. +.-.|++.-.
T Consensus 395 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (568)
T 3h4z_A 395 KSETFDPMKVPDHSDKFERHIGIIDLKGELDMRNIQVRGLKQMKRVGDANVKSEDGVVKAHLLVGVHDDVVSMEYDLAYK 474 (568)
T ss_dssp HCSTTTTEEECCEEEEEECCCSSSCCEEEEEEEEEEEECGGGCEECSCCEEEEETTEEEEEEEEEECSSCEEEEEEEEEC
T ss_pred CCCCcCCccCcchhhhhcCCceeeeecceeEeeccEEEeeeehhccccceeeccCcEEEEEeecccccccccceeEEEEE
Confidence 4789999999996555432 2 33467889999999999885 33333445566677766664222 5556666644
Q ss_pred EEEEEeeeeceeeEEeceeEEEEEEEEEEEeeCCeeEEEEEEeEEEEEeceEEEEEcccCCCchHHHHHHHHHhhhcHHH
Q psy7348 111 VLLFPVRSRGDFWAAFGNVTGLAKLYATEQLRNETKFMKTERLGIQFKLSKSNFKIKDFINRNNVIGEAMNIFLNQNAAE 190 (229)
Q Consensus 111 i~~~pi~g~G~~~~~~~~~~~~~~~~~~~~~~~g~~~l~i~~~~~~~~i~~~~~~l~nl~~g~~~l~~~~n~~iN~n~~~ 190 (229)
+.. ..-.|-..+.+...++...+.. ..+| |+.++++++. +++.+.+++.++--=+...+.+ ..+
T Consensus 475 ~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~~~ 538 (568)
T 3h4z_A 475 LGD--LHPNTHVISDIQDFVVELSLEV---SEEG--NMTLTSFEVR-QFANVVNHIGGLSILDPIFAVL--------SDV 538 (568)
T ss_dssp BTT--BCCEEEEEEEESSEEEEEEEEE---CTTC--CEEEEEEEEC-CCSCEEEEETTCCTTSHHHHHH--------HHH
T ss_pred eec--cCCCceEEeEeeeEEEEEEEEe---eccc--eEEeeeeeEE-EecceeEEecCcchHHHHHHHH--------HHH
Confidence 321 1223444556665555555433 3355 6888998876 8999999998764323333333 335
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHhccC
Q psy7348 191 IIEEMKPAASAAIGKHFKSFLNAAFLQI 218 (229)
Q Consensus 191 i~~~~~p~i~~~~~~~~~~~~N~i~~~~ 218 (229)
+.+-++-.|...+++.+.+.+.+.+++.
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (568)
T 3h4z_A 539 LTAIFQDTVRAEMTKVLAPAFKKELERN 566 (568)
T ss_dssp HHHTTTTHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5557777777777777777777666553
No 8
>3e8t_A Takeout 1, takeout-like protein 1; transport protein; HET: UQ8; 1.30A {Epiphyas postvittana} PDB: 3e8w_A*
Probab=91.68 E-value=4.1 Score=32.23 Aligned_cols=36 Identities=6% Similarity=0.077 Sum_probs=18.5
Q ss_pred hHHHHHHHHHhhhcHHHHHHHhcHHHHHHHHHHHHH
Q psy7348 174 NVIGEAMNIFLNQNAAEIIEEMKPAASAAIGKHFKS 209 (229)
Q Consensus 174 ~~l~~~~n~~iN~n~~~i~~~~~p~i~~~~~~~~~~ 209 (229)
..+++.+..++++..+.+.+.+...+...+.+++..
T Consensus 176 ~~iN~nw~~i~~e~~p~i~~~~~~~~~~i~n~if~~ 211 (220)
T 3e8t_A 176 TFLNQNWKQVSEEFGKPVMEAAAKKIFKNIKHFLAK 211 (220)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444445555555555555555555555555544443
No 9
>2rqf_A HJHBP, hemolymph juvenIle hormone binding protein; HET: JH3; NMR {Bombyx mori} PDB: 3a1z_A 3aos_A* 3aot_A*
Probab=70.50 E-value=38 Score=26.84 Aligned_cols=65 Identities=18% Similarity=0.139 Sum_probs=48.5
Q ss_pred EEeceEEE---EEccc-CCCchHHHH-HHHHHhhhcHHHHHHHhcHHHHHHHHHHHHHHHHHHhccCCcc
Q psy7348 157 FKLSKSNF---KIKDF-INRNNVIGE-AMNIFLNQNAAEIIEEMKPAASAAIGKHFKSFLNAAFLQIPLK 221 (229)
Q Consensus 157 ~~i~~~~~---~l~nl-~~g~~~l~~-~~n~~iN~n~~~i~~~~~p~i~~~~~~~~~~~~N~i~~~~p~~ 221 (229)
+++.++++ .+.+. +.=+.++++ ++++..|++|+..++..-+...+.+++++....-.+|.++-..
T Consensus 144 l~i~~~~v~~~~ig~~~~~l~~~l~~~~~~d~~n~~~~~~y~~~~~~~~~~i~~ive~~~~~v~~~~~~~ 213 (227)
T 2rqf_A 144 FEVQPETFTCESIGEPKITLSSDLSSALEKDSGNNSLEPDMEPLKTLRQAAICKIAEACYISVVHNIRAS 213 (227)
T ss_dssp EEECCCEEEEEECSSCEEEECHHHHHHHHHHHTCSSCCTTSSSHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEeEEeccEEEEcchhhhhhhhhchhHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666666 33332 111477877 6799999999999999889999999999999999999864433
No 10
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=41.82 E-value=46 Score=26.16 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=19.3
Q ss_pred ecccceEEEEEEEcCCCcEEEEEEEecEEEEEEEEEEEEEEEEEEeeeeceee
Q psy7348 71 HGASNYTVLNVKSDLNKYRIDLALHLPHIEVTGNYDVNGNVLLFPVRSRGDFW 123 (229)
Q Consensus 71 ~Gls~~~i~~~~~~~~~~~~~~~~~~P~l~~~g~Y~~~g~i~~~pi~g~G~~~ 123 (229)
+|+++..-.++.+..+. +++ .+-+.|+|++. ..|+|+|.
T Consensus 35 ~g~~~~~~~~~~v~qDG-tf~------~~lF~G~Yki~-------~~~nGpf~ 73 (202)
T 4fxt_A 35 DGYALKGSIPVYIAQDG-SYS------VSLFNGDYKLV-------RMGNAPWE 73 (202)
T ss_dssp CC----CCEEEEBCTTS-EEE------EEEESEEEEEE-------EEETCSBC
T ss_pred cccCCCCCeeEEEcCCC-cEE------EEEEcceeEEE-------ECCCCCcc
Confidence 55555544444444444 222 23467888877 56777765
No 11
>2ejx_A ST0812; arcaea, unknown function, NPPSFA; 1.79A {Sulfolobus tokodaii str}
Probab=39.37 E-value=82 Score=23.15 Aligned_cols=28 Identities=14% Similarity=0.432 Sum_probs=20.9
Q ss_pred EEEEEEEEEEEEEeeeeceeeEEeceeEE
Q psy7348 103 GNYDVNGNVLLFPVRSRGDFWAAFGNVTG 131 (229)
Q Consensus 103 g~Y~~~g~i~~~pi~g~G~~~~~~~~~~~ 131 (229)
+.|++.|+++.+|..-.|+..+.. +++.
T Consensus 47 ~~F~~~g~f~~~~~~~~G~vy~s~-~I~y 74 (139)
T 2ejx_A 47 EIFEAEGKFLAFSYKVKGRVYKGV-DEVR 74 (139)
T ss_dssp TEEEEEEEETTEEEEEEEEEEEET-TEEE
T ss_pred CeEEEEEEEeeEEEEEEEEEEEcC-cEEE
Confidence 489999988777888777777666 5554
No 12
>2g5x_A Lychnin, ribosome-inactivating protein; alpha-beta protein, hydrolase; 1.70A {Lychnis chalcedonica}
Probab=33.97 E-value=34 Score=27.50 Aligned_cols=28 Identities=14% Similarity=0.232 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHhhcCCCCC-CCCCCCCc
Q psy7348 17 DCIKQTFNHLRKYLIQGIDE-IAVPSIEP 44 (229)
Q Consensus 17 ~Cl~~~~~~~~~~~~~Gip~-lgip~ldP 44 (229)
+--...++.+|.+++.|-.. .|||.|.|
T Consensus 11 ~~Y~~FI~~LR~~l~~~~~~~~~iPvL~~ 39 (234)
T 2g5x_A 11 AKYSSFLDSLREEFGRGTPKVCNIPVTKK 39 (234)
T ss_dssp HHHHHHHHHHHHHHHTTSCCBTTBCBCCT
T ss_pred HHHHHHHHHHHHHhhcCCcccCCEeccCC
Confidence 44678899999999988765 57888865
No 13
>3uv1_A DER F 7 allergen; super-roll; 2.00A {Dermatophagoides farinae}
Probab=32.08 E-value=1.7e+02 Score=22.24 Aligned_cols=44 Identities=5% Similarity=0.123 Sum_probs=33.0
Q ss_pred CCCchHHHHHHHHHhhhcHHHHHHHhcHHHHHHHHHHHHHHHHHHhcc
Q psy7348 170 INRNNVIGEAMNIFLNQNAAEIIEEMKPAASAAIGKHFKSFLNAAFLQ 217 (229)
Q Consensus 170 ~~g~~~l~~~~n~~iN~n~~~i~~~~~p~i~~~~~~~~~~~~N~i~~~ 217 (229)
|.|-..++-+++-+. ..+.+.+++.|.+++++.+...+++-+++
T Consensus 152 ~~Glg~ld~l~~~i~----n~~~~l~~~~I~~~ie~~v~~~i~~~l~K 195 (196)
T 3uv1_A 152 IGGLSILDPIFGVLS----DVLTAIFQDTVRKEMTKVLAPAFKRELEK 195 (196)
T ss_dssp ETTCCTTSHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EECCcchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 456555555555554 47888899999999999999988876654
No 14
>1wuc_A Bouganin; alpha-beta protein; 1.80A {Bougainvillea spectabilis} PDB: 3ctk_A
Probab=31.49 E-value=47 Score=26.96 Aligned_cols=28 Identities=18% Similarity=0.153 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCce
Q psy7348 18 CIKQTFNHLRKYLIQGIDEIAVPSIEPL 45 (229)
Q Consensus 18 Cl~~~~~~~~~~~~~Gip~lgip~ldPl 45 (229)
--...++.+|.+++.|-...|||.|.|-
T Consensus 15 ~Y~~FI~~LR~~l~~~~~~~~ipvL~~~ 42 (250)
T 1wuc_A 15 EYPTFIQDLRNELAKGTPVCQLPVTLQT 42 (250)
T ss_dssp GHHHHHHHHHHHHCCSCCBTTBCBCCSC
T ss_pred hHHHHHHHHHHHhccCCccCCeeecCCC
Confidence 3567899999999987766788877553
No 15
>2hv8_D RAB11 family-interacting protein 3; protein transport, RAB11A, FIP3, cytokinesis, recycling endosomes; HET: GTP MES; 1.86A {Homo sapiens} SCOP: h.1.31.1
Probab=29.17 E-value=91 Score=19.69 Aligned_cols=53 Identities=9% Similarity=0.120 Sum_probs=31.8
Q ss_pred EcccCCCchHHHHHHHHHhhhcHHHHHHHhc--HHHHHHHHHHHHHHHHHHhccCC
Q psy7348 166 IKDFINRNNVIGEAMNIFLNQNAAEIIEEMK--PAASAAIGKHFKSFLNAAFLQIP 219 (229)
Q Consensus 166 l~nl~~g~~~l~~~~n~~iN~n~~~i~~~~~--p~i~~~~~~~~~~~~N~i~~~~p 219 (229)
..|||++ ..-.....++-+-.-.++.+.++ ..+...+.+++-.++-+|.++-|
T Consensus 4 ~~~~~~~-~~~~slAae~~~~s~deL~~~l~eqee~n~~Le~YID~LL~~ImE~~P 58 (64)
T 2hv8_D 4 AKSLFST-AFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDRIIVAIMETNP 58 (64)
T ss_dssp --------CHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCG
T ss_pred hhhccCC-CccHhHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3578876 33445566666666777777774 45667777788788888887766
No 16
>3ctk_A RIP;, rRNA N-glycosidase; alpha-beta protein, hydrolase; 1.80A {Bougainvillea spectabilis} SCOP: d.165.1.1
Probab=28.69 E-value=47 Score=26.81 Aligned_cols=26 Identities=19% Similarity=0.220 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCc
Q psy7348 19 IKQTFNHLRKYLIQGIDEIAVPSIEP 44 (229)
Q Consensus 19 l~~~~~~~~~~~~~Gip~lgip~ldP 44 (229)
-...++.+|.+++.|.+..++|.+-|
T Consensus 14 Y~~Fi~~LR~~l~~~~~~~~ipvl~~ 39 (248)
T 3ctk_A 14 YPTFIQDLRNELAKGTPVCQLPVTLQ 39 (248)
T ss_dssp HHHHHHHHHHHHCCSCCBTTBCBCCS
T ss_pred HHHHHHHHHHHhhcCCcccCCcccCC
Confidence 57788999999999999899998765
No 17
>2ljs_A Trypsin inhibitor 3; beta strand, helix, cyclic backbone, hydrolase inhibitor; HET: PCA; NMR {Momordica cochinchinensis}
Probab=23.45 E-value=12 Score=19.59 Aligned_cols=17 Identities=18% Similarity=0.534 Sum_probs=11.9
Q ss_pred CCCCcccCCCCCChhhH
Q psy7348 2 AEYIHPCTKASPKINDC 18 (229)
Q Consensus 2 p~~~~~C~~~dp~l~~C 18 (229)
|.-+++|+|.+.=..+|
T Consensus 5 prilkkckrdsdcpgec 21 (30)
T 2ljs_A 5 PRILKKCRRDSDCPGEC 21 (30)
T ss_dssp CCCCCBCSSGGGSSTTC
T ss_pred HHHHHHhccccCCchhh
Confidence 67789999986434444
No 18
>3n54_B Spore germination protein B3; A novel fold, lipid binding protein; 2.30A {Bacillus subtilis subsp}
Probab=23.27 E-value=2.6e+02 Score=23.08 Aligned_cols=53 Identities=6% Similarity=0.181 Sum_probs=24.3
Q ss_pred CCeeEEEEEEeEEEEEeceEEEEEcccCCCc--hHHHHHHHHHhhhcHHHHHHHhc
Q psy7348 143 NETKFMKTERLGIQFKLSKSNFKIKDFINRN--NVIGEAMNIFLNQNAAEIIEEMK 196 (229)
Q Consensus 143 ~g~~~l~i~~~~~~~~i~~~~~~l~nl~~g~--~~l~~~~n~~iN~n~~~i~~~~~ 196 (229)
+|+-.+.|. ++++..+......-.++++-. +.+++.+++.+.+....+++.+|
T Consensus 242 ~~~~~~~i~-i~~~g~i~E~~~~~~~~~~~~~~~~le~~~~~~i~~~~~~~i~k~Q 296 (350)
T 3n54_B 242 NGKPVFHIS-VKTKGILTEDQNPNENSFSKSYLHRLENIFEKKLERDVKQVMDKLQ 296 (350)
T ss_dssp SSSEEEEEE-EEEEEEEECCCC-----CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEE-EEEEEEEEEcccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 565443332 444444443322112343221 45666677777766666665543
No 19
>2e2f_A Diapausin; Ca-channel blocker, antifungal peptide, structural genomics, antifungal protein; NMR {Gastrophysa atrocyanea}
Probab=23.14 E-value=42 Score=18.83 Aligned_cols=16 Identities=19% Similarity=0.731 Sum_probs=13.6
Q ss_pred cccCCCCCChhhHHHH
Q psy7348 6 HPCTKASPKINDCIKQ 21 (229)
Q Consensus 6 ~~C~~~dp~l~~Cl~~ 21 (229)
+.|+|-+|+=++|-+.
T Consensus 9 qvcsri~pekdeccra 24 (41)
T 2e2f_A 9 QVCPRIVPERHECCRA 24 (41)
T ss_dssp HSTTSCSTTTHHHHHH
T ss_pred hcccCcCcchhHHHHh
Confidence 4699999999999764
No 20
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=22.21 E-value=40 Score=24.01 Aligned_cols=27 Identities=15% Similarity=0.393 Sum_probs=15.8
Q ss_pred CceeeCeEEEeeCCCceEEEEEEEeeE
Q psy7348 43 EPLIIPAMKMENGHGAVRVRAIFSNLT 69 (229)
Q Consensus 43 dPl~i~~~~i~~~~~~~~~~~~~~n~~ 69 (229)
|-|.-|..+++++++.+-+++.+..+.
T Consensus 13 ~~~iTP~F~itQDdefv~I~I~~p~ir 39 (115)
T 3eud_A 13 DKMITPRFSITQDEEFIFLKIFISNIR 39 (115)
T ss_dssp -CCBCCCEEEEECSSEEEEEEECCSCC
T ss_pred CCEeCCcEEEEECCCEEEEEEEcCcee
Confidence 445566777777766555555555544
No 21
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=21.14 E-value=61 Score=21.79 Aligned_cols=22 Identities=23% Similarity=0.566 Sum_probs=19.3
Q ss_pred CCCCChhhHHHHHHHHHHHhhc
Q psy7348 10 KASPKINDCIKQTFNHLRKYLI 31 (229)
Q Consensus 10 ~~dp~l~~Cl~~~~~~~~~~~~ 31 (229)
.++.++.+-+.++++.+||+++
T Consensus 3 ~t~~~~~~~I~~~L~~IRP~L~ 24 (88)
T 1xhj_A 3 TENPTMFDQVAEVIERLRPFLL 24 (88)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHhcHHHH
Confidence 4667888999999999999997
No 22
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=20.59 E-value=1.1e+02 Score=24.28 Aligned_cols=18 Identities=17% Similarity=0.320 Sum_probs=11.8
Q ss_pred EEEEEEEEEEEEEEEEeeeeceee
Q psy7348 100 EVTGNYDVNGNVLLFPVRSRGDFW 123 (229)
Q Consensus 100 ~~~g~Y~~~g~i~~~pi~g~G~~~ 123 (229)
-+.|+|++. +.+|+|+|.
T Consensus 61 lF~G~Yki~------~~~gnGPf~ 78 (215)
T 3hn5_A 61 LFDGEYQMI------TKSGNGPWT 78 (215)
T ss_dssp ECSEEEEEE------ECTTCSSBC
T ss_pred EECceeEEE------EecCCCCcc
Confidence 356777765 456778776
No 23
>3ktz_A Ribosome-inactivating protein gelonin; plant seeds, glycosidase, disulfide bond, glycoprotein, hydrolase, plant defense; HET: NAG; 1.60A {Gelonium multiflorum} SCOP: d.165.1.0 PDB: 3ku0_A*
Probab=20.18 E-value=45 Score=27.04 Aligned_cols=29 Identities=17% Similarity=0.107 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCce
Q psy7348 17 DCIKQTFNHLRKYLIQGIDEIAVPSIEPL 45 (229)
Q Consensus 17 ~Cl~~~~~~~~~~~~~Gip~lgip~ldPl 45 (229)
+--..+++.+|.+++.|....|||.|-|-
T Consensus 15 ~~Y~~FI~~LR~~l~~~~~~~~iPvL~~~ 43 (251)
T 3ktz_A 15 ITYVNFLNELRVKLKPEGNSHGIPLLRKK 43 (251)
T ss_dssp HHHHHHHHHHHHHTCCCSEETTEEBCCSC
T ss_pred HHHHHHHHHHHHHhccCCccCCceecCCC
Confidence 44678899999999987766788877554
Done!