BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7349
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DD38|TRIAB_XENLA TP53-regulated inhibitor of apoptosis 1-B OS=Xenopus laevis
GN=triap1-b PE=3 SV=1
Length = 78
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
MNSV +ECT +K +YD+CF WF EKFLKGD C+ L + Y+ CVQ +
Sbjct: 1 MNSVGEECTDMKREYDQCFNRWFAEKFLKGDGSGDPCTELFRRYRECVQKAI 52
>sp|O43715|TRIA1_HUMAN TP53-regulated inhibitor of apoptosis 1 OS=Homo sapiens GN=TRIAP1
PE=1 SV=1
Length = 76
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
MNSV + CT +K +YD+CF WF EKFLKGD+ C+ L K YQ CVQ +
Sbjct: 1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAI 52
>sp|Q9D8Z2|TRIA1_MOUSE TP53-regulated inhibitor of apoptosis 1 OS=Mus musculus GN=Triap1
PE=2 SV=1
Length = 76
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%)
Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
MNSV + CT +K +YD+CF WF EKFLKGD C+ L K YQ CVQ +
Sbjct: 1 MNSVGEACTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAI 52
>sp|A9ULB4|TRIA1_XENTR TP53-regulated inhibitor of apoptosis 1 OS=Xenopus tropicalis
GN=triap1 PE=2 SV=1
Length = 78
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
MNSV +ECT +K +YD+CF WF EKFLKG+ C+ L + Y+ CVQ +
Sbjct: 1 MNSVGEECTDMKREYDQCFNRWFAEKFLKGECSGDPCTELFRRYRDCVQKAI 52
>sp|Q6INR6|TRIAA_XENLA TP53-regulated inhibitor of apoptosis 1-A OS=Xenopus laevis
GN=triap1-a PE=3 SV=1
Length = 78
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
MNSV +ECT +K YD+CF WF EKFLKG C+ L + Y+ CVQ +
Sbjct: 1 MNSVGEECTDMKRDYDQCFNRWFAEKFLKGAGSGDPCTELFRRYRECVQKAI 52
>sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC119.18 PE=3 SV=1
Length = 69
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 27 NSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
+SVS+ECT K +YD CF W+ KFLKGD + C L Y+SC+ L
Sbjct: 3 SSVSEECTPAKKKYDACFNDWYANKFLKGDLHNRDCDELFAEYKSCLLKAL 53
>sp|O60200|MDM35_YEAST Mitochondrial distribution and morphology protein 35
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=MDM35 PE=1 SV=3
Length = 86
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 28 SVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCLI 78
S + ECT LK +YD CF W++EKFLKG + ++ CS Y +CV L+
Sbjct: 8 SFAPECTDLKTKYDSCFNEWYSEKFLKGKSVENECSKQWYAYTTCVNAALV 58
>sp|Q9SMZ9|Y4331_ARATH Uncharacterized protein At4g33100 OS=Arabidopsis thaliana
GN=At4g33100 PE=3 SV=1
Length = 92
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 33 CTQLKHQYDECFQTWFTEKFLKGDTDDSMCSPLLKVYQSCVQNCL 77
C L++ Y CF W++EKF+KG D C K Y+ C+ L
Sbjct: 19 CADLRNAYHNCFNKWYSEKFVKGQWDKEECVAEWKKYRDCLSENL 63
>sp|P45967|YNZ7_CAEEL Uncharacterized protein T09A5.7 OS=Caenorhabditis elegans
GN=T09A5.7 PE=3 SV=1
Length = 103
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 26 MNSVSKECTQLKHQYDECFQTWFTEKFLKGDTDDSM----CSPLLKVYQSCVQNCL 77
M+S+ EC LK YD+CF T F +KF+ + C L VY+ CV+ L
Sbjct: 6 MSSIFPECDHLKQIYDKCF-TEFFQKFITPNYRHQYAVNPCERLHDVYKRCVEERL 60
>sp|Q1MRV5|SYFA_LAWIP Phenylalanine--tRNA ligase alpha subunit OS=Lawsonia
intracellularis (strain PHE/MN1-00) GN=pheS PE=3 SV=1
Length = 345
Score = 32.3 bits (72), Expect = 0.97, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 9 SKPEDETTSTKPVFGDKMNSVSKECTQLKHQY 40
SK TS +PV G+ NSV + TQL H+Y
Sbjct: 46 SKIPSVDTSLRPVVGETANSVKNQLTQLIHEY 77
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,512,462
Number of Sequences: 539616
Number of extensions: 965925
Number of successful extensions: 1884
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1869
Number of HSP's gapped (non-prelim): 17
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)