Query psy7350
Match_columns 315
No_of_seqs 226 out of 1748
Neff 7.6
Searched_HMMs 46136
Date Sat Aug 17 00:30:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7350.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7350hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03869 M14_CPX_like Peptidase 100.0 1.5E-75 3.3E-80 557.9 25.4 280 1-310 33-322 (405)
2 cd03865 M14_CPE_H Peptidase M1 100.0 3.4E-74 7.3E-79 548.8 25.1 277 1-310 33-319 (402)
3 cd03864 M14_CPN Peptidase M14 100.0 1.8E-72 4E-77 538.1 25.9 276 1-310 29-309 (392)
4 cd03863 M14_CPD_II The second 100.0 2.6E-72 5.6E-77 534.7 25.7 255 1-310 34-290 (375)
5 KOG2649|consensus 100.0 5.2E-71 1.1E-75 521.8 22.5 274 1-310 97-371 (500)
6 cd06245 M14_CPD_III The third 100.0 5.2E-70 1.1E-74 517.8 25.9 249 1-310 30-280 (363)
7 cd03866 M14_CPM Peptidase M14 100.0 6.9E-68 1.5E-72 505.7 26.1 256 1-310 33-288 (376)
8 cd03867 M14_CPZ Peptidase M14- 100.0 4.6E-65 1E-69 489.8 26.4 256 1-310 29-311 (395)
9 cd03868 M14_CPD_I The first ca 100.0 6.7E-65 1.5E-69 486.5 26.4 256 1-311 29-290 (372)
10 cd03858 M14_CP_N-E_like Carbox 100.0 5E-61 1.1E-65 460.7 26.0 257 1-311 29-292 (374)
11 cd06226 M14_CPT_like Peptidase 100.0 1E-55 2.2E-60 408.6 22.7 230 4-311 21-292 (293)
12 cd03859 M14_CPT Peptidase M14- 100.0 3.1E-55 6.7E-60 407.9 20.3 233 1-308 32-295 (295)
13 cd03870 M14_CPA Peptidase M14 100.0 1E-54 2.2E-59 403.8 21.9 237 1-311 34-294 (301)
14 cd03871 M14_CPB Peptidase M14 100.0 4.7E-55 1E-59 405.6 18.9 237 1-311 34-295 (300)
15 cd06246 M14_CPB2 Peptidase M14 100.0 1.2E-54 2.5E-59 403.5 20.6 241 1-314 33-298 (300)
16 cd06248 M14_CPA_CPB_like Pepti 100.0 3.2E-54 7E-59 401.9 21.3 241 1-311 32-300 (304)
17 cd06247 M14_CPO Peptidase M14 100.0 3.5E-54 7.5E-59 399.2 20.5 240 1-313 32-296 (298)
18 KOG2650|consensus 100.0 8.9E-55 1.9E-59 414.7 16.9 236 1-309 149-412 (418)
19 cd03872 M14_CPA6 Carboxypeptid 100.0 4.1E-53 8.8E-58 392.1 17.7 237 1-310 30-291 (300)
20 cd06228 Peptidase_M14-like_3 A 100.0 5E-52 1.1E-56 387.2 21.4 264 1-309 8-332 (332)
21 cd03860 M14_CP_A-B_like The Pe 100.0 3E-50 6.6E-55 374.4 21.9 235 1-310 29-289 (294)
22 PF00246 Peptidase_M14: Zinc c 100.0 1.1E-50 2.4E-55 374.8 17.6 239 1-307 23-279 (279)
23 smart00631 Zn_pept Zn_pept. 100.0 3.9E-48 8.4E-53 357.5 20.6 226 1-298 29-274 (277)
24 cd06229 M14_Endopeptidase_I Pe 100.0 5.9E-48 1.3E-52 352.1 20.1 215 2-306 1-253 (255)
25 cd06905 Peptidase_M14-like_8 A 100.0 1.5E-47 3.4E-52 362.4 20.6 231 1-299 32-353 (360)
26 cd06227 Peptidase_M14-like_2 A 100.0 5.1E-47 1.1E-51 347.4 21.1 211 1-287 30-257 (272)
27 cd03862 Peptidase_M14-like_7 A 100.0 2.5E-39 5.5E-44 296.3 21.8 198 5-289 9-241 (273)
28 cd06237 M14_Nna1_like_3 A bact 100.0 5.4E-39 1.2E-43 290.2 16.7 131 1-154 33-168 (244)
29 cd00596 Peptidase_M14_like The 100.0 1.2E-36 2.5E-41 267.0 17.8 196 27-308 1-196 (196)
30 cd06234 M14_Nna1_like_1 A bact 100.0 2.2E-36 4.7E-41 275.4 19.8 133 1-154 36-168 (263)
31 cd03856 M14_Nna1_like Peptidas 100.0 3E-35 6.5E-40 269.6 16.9 131 1-151 35-173 (269)
32 cd06908 M14_AGBL4_like Peptida 100.0 3.5E-34 7.5E-39 260.4 19.6 141 1-156 19-167 (261)
33 cd06238 Peptidase_M14-like_1_1 100.0 3.7E-33 8E-38 255.4 18.2 141 1-150 3-186 (271)
34 PRK10602 murein peptide amidas 100.0 1.6E-33 3.4E-38 252.5 14.7 187 1-307 22-230 (237)
35 cd06235 M14_Nna1_like_2 Subgro 100.0 3E-31 6.6E-36 242.0 19.5 140 1-155 20-166 (258)
36 cd06239 Peptidase_M14-like_1_2 100.0 2E-29 4.4E-34 225.6 19.2 127 1-154 17-143 (231)
37 cd06243 Peptidase_M14-like_1_6 100.0 1.1E-29 2.3E-34 228.2 16.6 127 1-145 3-133 (236)
38 cd06236 M14_AGBL5_like Peptida 100.0 2.1E-29 4.6E-34 232.5 14.6 142 1-156 23-190 (304)
39 cd06242 Peptidase_M14-like_1_5 100.0 3.7E-29 8E-34 229.2 14.9 127 1-147 30-157 (268)
40 cd06904 M14_MpaA_like Peptidas 100.0 4.4E-29 9.5E-34 216.1 14.4 102 27-146 1-113 (178)
41 cd06907 M14_AGBL2-3_like Pepti 100.0 2.2E-28 4.7E-33 221.3 19.0 140 1-155 21-167 (261)
42 cd06244 Peptidase_M14-like_1_7 100.0 5.9E-29 1.3E-33 225.3 15.0 135 1-151 3-178 (268)
43 cd03857 Peptidase_M14-like_1 P 100.0 5.5E-28 1.2E-32 216.8 16.4 125 1-144 3-132 (226)
44 cd06241 Peptidase_M14-like_1_4 100.0 8.7E-28 1.9E-32 220.0 15.4 141 1-154 20-171 (266)
45 cd06240 Peptidase_M14-like_1_3 99.9 1.7E-26 3.7E-31 211.0 14.2 138 1-147 7-182 (273)
46 cd06906 M14_Nna1 Peptidase M14 99.9 4E-24 8.7E-29 194.4 13.5 138 1-153 22-172 (278)
47 cd06231 Peptidase_M14-like_4 A 99.9 5.7E-24 1.2E-28 191.4 14.0 114 4-145 26-141 (236)
48 cd06232 Peptidase_M14-like_5 P 99.9 7.9E-24 1.7E-28 186.4 13.2 118 1-145 22-145 (240)
49 cd06251 M14_ASTE_ASPA_like_1 A 99.6 2.7E-15 5.9E-20 139.3 14.5 109 8-145 9-119 (287)
50 cd06250 M14_PaAOTO_like An unc 99.6 8.6E-15 1.9E-19 139.8 14.5 132 5-151 13-177 (359)
51 cd06252 M14_ASTE_ASPA_like_2 A 99.6 3.5E-14 7.5E-19 133.7 15.7 110 6-146 22-135 (316)
52 TIGR02994 ectoine_eutE ectoine 99.6 2.8E-14 6.1E-19 134.4 15.1 97 24-145 47-147 (325)
53 cd06254 M14_ASTE_ASPA_like_4 A 99.6 2.2E-14 4.7E-19 133.4 13.9 119 6-152 4-126 (288)
54 cd06253 M14_ASTE_ASPA_like_3 A 99.5 1.4E-13 3.1E-18 128.4 15.0 113 7-145 9-124 (298)
55 cd06233 Peptidase_M14-like_6 P 99.5 7.2E-14 1.5E-18 128.4 12.0 81 7-109 39-120 (283)
56 PF04952 AstE_AspA: Succinylgl 99.5 5.2E-14 1.1E-18 130.8 10.2 104 24-146 2-112 (292)
57 cd06255 M14_ASTE_ASPA_like_5 A 99.5 1.2E-13 2.6E-18 128.7 12.2 109 8-146 13-125 (293)
58 cd06230 M14_ASTE_ASPA_like The 99.5 1E-13 2.3E-18 126.4 9.7 102 27-153 1-104 (252)
59 KOG3641|consensus 99.5 2.5E-13 5.5E-18 131.5 9.7 136 2-155 410-552 (650)
60 COG2866 Predicted carboxypepti 99.3 5.1E-12 1.1E-16 121.0 11.0 93 1-109 128-222 (374)
61 cd03855 M14_ASTE Peptidase M14 99.3 3.5E-10 7.7E-15 106.7 18.9 100 22-143 40-149 (322)
62 PRK02259 aspartoacylase; Provi 99.2 3E-11 6.4E-16 112.3 9.5 100 25-145 3-108 (288)
63 COG3608 Predicted deacylase [G 99.2 1.3E-10 2.9E-15 108.1 10.7 107 23-154 47-158 (331)
64 cd06909 M14_ASPA Aspartoacylas 99.1 2.3E-10 5E-15 105.8 10.0 100 25-145 1-106 (282)
65 TIGR03242 arg_catab_astE succi 99.1 1.6E-09 3.4E-14 102.2 15.1 100 22-143 39-148 (319)
66 cd06910 M14_ASTE_ASPA_like_7 A 99.1 2.4E-10 5.2E-15 105.5 9.4 110 25-154 1-113 (272)
67 cd06256 M14_ASTE_ASPA_like_6 A 99.1 5.2E-10 1.1E-14 105.5 9.9 95 25-145 35-132 (327)
68 PRK05324 succinylglutamate des 99.1 2.5E-09 5.4E-14 101.2 13.3 100 22-143 45-153 (329)
69 PF10994 DUF2817: Protein of u 99.0 3.1E-09 6.7E-14 100.5 12.0 218 8-288 40-288 (341)
70 COG2988 Succinylglutamate desu 98.3 5.9E-06 1.3E-10 75.2 11.7 97 26-142 45-147 (324)
71 cd03863 M14_CPD_II The second 97.6 5.6E-05 1.2E-09 72.8 3.5 37 167-203 150-186 (375)
72 PF09892 DUF2119: Uncharacteri 97.5 0.00023 5E-09 61.1 5.8 83 25-146 7-89 (193)
73 cd06245 M14_CPD_III The third 97.4 0.00013 2.7E-09 70.2 3.2 38 165-202 144-181 (363)
74 cd03867 M14_CPZ Peptidase M14- 97.1 0.00026 5.7E-09 68.8 2.9 38 167-204 170-207 (395)
75 cd03866 M14_CPM Peptidase M14 97.1 0.00047 1E-08 66.6 3.8 39 167-205 148-186 (376)
76 cd03868 M14_CPD_I The first ca 96.8 0.001 2.3E-08 64.1 3.9 40 165-204 148-187 (372)
77 COG4073 Uncharacterized protei 96.3 0.0049 1.1E-07 51.9 4.3 78 28-145 18-95 (198)
78 cd03872 M14_CPA6 Carboxypeptid 96.2 0.0064 1.4E-07 56.9 5.1 43 161-203 156-200 (300)
79 KOG2649|consensus 95.8 0.011 2.3E-07 57.9 4.4 142 28-180 147-289 (500)
80 cd03859 M14_CPT Peptidase M14- 95.2 0.011 2.5E-07 55.2 2.4 44 160-203 165-209 (295)
81 KOG2650|consensus 94.8 0.044 9.4E-07 53.5 5.2 47 158-204 274-322 (418)
82 cd03858 M14_CP_N-E_like Carbox 94.8 0.022 4.7E-07 55.0 3.1 40 165-204 149-188 (374)
83 cd06227 Peptidase_M14-like_2 A 94.7 0.02 4.3E-07 52.9 2.5 43 161-203 152-194 (272)
84 cd06226 M14_CPT_like Peptidase 94.6 0.027 5.8E-07 52.6 3.0 41 161-201 152-208 (293)
85 cd06248 M14_CPA_CPB_like Pepti 94.5 0.022 4.9E-07 53.4 2.3 44 160-203 159-206 (304)
86 cd03870 M14_CPA Peptidase M14 94.2 0.03 6.4E-07 52.6 2.5 44 160-203 158-202 (301)
87 cd03871 M14_CPB Peptidase M14 93.8 0.039 8.3E-07 51.8 2.3 43 160-202 158-202 (300)
88 smart00631 Zn_pept Zn_pept. 93.7 0.043 9.2E-07 50.7 2.4 65 161-235 150-215 (277)
89 cd06246 M14_CPB2 Peptidase M14 93.5 0.044 9.6E-07 51.4 2.1 44 160-203 158-203 (300)
90 cd06905 Peptidase_M14-like_8 A 92.6 0.099 2.1E-06 50.3 3.2 56 148-203 215-271 (360)
91 cd03860 M14_CP_A-B_like The Pe 92.3 0.084 1.8E-06 49.3 2.3 40 162-201 154-195 (294)
92 cd06247 M14_CPO Peptidase M14 90.2 0.19 4E-06 47.1 2.2 45 159-203 156-202 (298)
93 cd06229 M14_Endopeptidase_I Pe 90.0 0.21 4.5E-06 45.7 2.3 42 160-201 139-180 (255)
94 cd06244 Peptidase_M14-like_1_7 89.5 1.4 3E-05 40.6 7.3 58 167-235 143-201 (268)
95 PF00246 Peptidase_M14: Zinc c 89.5 0.21 4.6E-06 45.9 2.0 41 162-202 147-187 (279)
96 cd06228 Peptidase_M14-like_3 A 88.9 0.29 6.2E-06 46.5 2.4 48 158-205 155-203 (332)
97 cd00596 Peptidase_M14_like The 86.5 0.61 1.3E-05 40.4 2.9 37 166-202 78-114 (196)
98 cd03862 Peptidase_M14-like_7 A 84.5 0.89 1.9E-05 42.1 3.1 38 166-203 128-172 (273)
99 cd03864 M14_CPN Peptidase M14 79.5 1.8 3.9E-05 42.2 3.3 79 75-156 127-207 (392)
100 cd06243 Peptidase_M14-like_1_6 74.1 13 0.00028 33.6 7.1 28 166-193 103-130 (236)
101 cd03857 Peptidase_M14-like_1 P 72.1 21 0.00045 31.9 7.9 38 167-204 105-142 (226)
102 cd06237 M14_Nna1_like_3 A bact 68.2 4.7 0.0001 36.6 2.9 98 166-290 125-227 (244)
103 cd06239 Peptidase_M14-like_1_2 64.5 14 0.00031 33.2 5.3 38 166-205 107-144 (231)
104 cd03865 M14_CPE_H Peptidase M1 58.3 12 0.00025 36.7 3.8 41 116-156 175-215 (402)
105 cd03869 M14_CPX_like Peptidase 50.9 18 0.00039 35.4 3.8 82 75-157 131-220 (405)
106 cd06904 M14_MpaA_like Peptidas 46.8 17 0.00037 31.2 2.6 95 164-305 81-175 (178)
107 COG1922 WecG Teichoic acid bio 38.3 1.1E+02 0.0023 28.1 6.5 42 57-103 54-96 (253)
108 PHA00425 DNA packaging protein 33.2 70 0.0015 23.9 3.6 36 172-236 36-71 (88)
109 cd06234 M14_Nna1_like_1 A bact 32.7 35 0.00075 31.4 2.4 107 165-289 132-238 (263)
110 cd06908 M14_AGBL4_like Peptida 32.5 34 0.00074 31.4 2.4 104 164-291 118-230 (261)
111 cd06241 Peptidase_M14-like_1_4 31.4 34 0.00073 31.5 2.2 37 167-204 135-171 (266)
112 cd06238 Peptidase_M14-like_1_1 29.7 38 0.00083 31.2 2.2 101 166-287 149-253 (271)
113 cd06236 M14_AGBL5_like Peptida 28.7 1.5E+02 0.0033 27.9 6.0 43 162-204 141-188 (304)
114 KOG3641|consensus 28.3 26 0.00056 35.6 0.8 38 58-107 153-190 (650)
115 PF11123 DNA_Packaging_2: DNA 25.1 1E+02 0.0022 22.7 3.3 35 172-235 34-68 (82)
116 cd03856 M14_Nna1_like Peptidas 25.0 66 0.0014 29.6 2.9 104 165-289 129-241 (269)
117 PF04219 DUF413: Protein of un 24.9 69 0.0015 24.6 2.5 25 104-128 5-29 (93)
118 PRK11027 hypothetical protein; 21.9 85 0.0018 25.0 2.5 25 104-128 14-38 (112)
119 PF13220 DUF4028: Protein of u 21.0 32 0.00069 23.6 -0.0 29 281-312 34-62 (65)
No 1
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=100.00 E-value=1.5e-75 Score=557.89 Aligned_cols=280 Identities=41% Similarity=0.750 Sum_probs=235.4
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcC-CChHHHHhhcCceEEEEcCCCch
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYN-TDPYIKWLLDNTRIHILPSMNPD 79 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~-~d~~~~~ll~~~~i~iiP~~NPD 79 (315)
+|+|||+|++|+|+++++.+..+||.|+++|+||||||+|++++++++++||++|. .|+.++++|++++|+|+|++|||
T Consensus 33 kS~EGR~L~~l~Is~~~~~~~~~kP~v~~~g~iHgrE~ig~~~~l~li~~L~~~y~~~d~~v~~Ll~~~~i~IvP~~NPD 112 (405)
T cd03869 33 KSYQGLKLYAMEISDNPGEHELGEPEFRYVAGMHGNEVLGRELLLLLMQFLCQEYLAGNPRVVHLVEETRIHLLPSMNPD 112 (405)
T ss_pred ECcCCceEEEEEEecCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHHHHhhhcCCHHHHHHHhcCeEEEEeeeCCc
Confidence 69999999999999877766668999999999999999999999999999999984 79999999999999999999999
Q ss_pred hhhhhhcc---cccCCCCCCcCCCcCCCCCCCc----cccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCC
Q psy7350 80 GYEVAREG---QCEGGQGRYNARGFDLNRNFPD----YFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFD 152 (315)
Q Consensus 80 G~~~~~~~---~~~~~~~R~n~~GvDLNRnfp~----~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~ 152 (315)
||+++++. .+.|+++|.||+|||||||||+ .|........|.. .|-.
T Consensus 113 G~e~s~~~~~~~~~Wrk~R~na~GVDLNRNFp~~~~~~W~~~~~~~~~~~--------------------------~~~~ 166 (405)
T cd03869 113 GYEKAYEAGSELGGWALGRWTEEGIDINHNFPDLNTILWEAEDKKKVPRK--------------------------VPNH 166 (405)
T ss_pred hhhhhhhcCccccccccCccCCCCccccCCCccccccccccccccccccc--------------------------cccc
Confidence 99999876 4679999999999999999995 5643211110000 0000
Q ss_pred CCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHH
Q psy7350 153 NTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTY 232 (315)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~ 232 (315)
+.+ -+..+....+..+||++||++|+++++|+||+++|||.+|++||||.++.... ..+++++|||++||.||++|
T Consensus 167 ~~P-c~~~Y~G~~~~sEPET~Av~~~i~~~~FvLSanlHgG~lv~~YPyd~~~~~~~---~~~~~~tpDd~~Fr~LA~~Y 242 (405)
T cd03869 167 HIP-IPEWYLSENATVAPETRAVIAWMEKIPFVLGANLQGGELVVSYPYDMTRTPWA---TQEATPTPDDAVFRWLATSY 242 (405)
T ss_pred CCC-CccccCCCCCCCcHHHHHHHHHHHhCCceEEEEecCccEEEEcCcccccCCcc---ccCCCCCCCHHHHHHHHHHH
Confidence 000 01111122345688899999999999999999999999999999999765321 23468999999999999999
Q ss_pred hhhCccccCCC--CCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhh
Q psy7350 233 SRNHPTMATGL--ACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDR 310 (315)
Q Consensus 233 a~~~~~m~~g~--~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~ 310 (315)
|.+|++|+.+. +|++....|..||+|||.||+++||||||+|.+++||++|+||+|+|||++++|+.+|++||+|||.
T Consensus 243 a~~h~~M~~~~~~~c~~~~~~~~~GitNGa~Wy~~~GgmqD~nY~~~ncfEiTlElsc~K~P~~~~L~~~W~~N~~all~ 322 (405)
T cd03869 243 ASTHLLMTDASRRVCHTEDFQKEDGIINGASWHTVAGSMNDFSYLHTNCFELSVYLGCDKFPHESELPEEWENNKESLLV 322 (405)
T ss_pred HHhCHHhhcCCCCCCCCcccccCCCceeCCeeccCCCcccchhhhccCeEEEEEeccCCCCCChHHHHHHHHHHHHHHHH
Confidence 99999999865 5987666678999999999999999999999999999999999999999999999999999999985
No 2
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=100.00 E-value=3.4e-74 Score=548.83 Aligned_cols=277 Identities=45% Similarity=0.766 Sum_probs=232.1
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcC-CChHHHHhhcCceEEEEcCCCch
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYN-TDPYIKWLLDNTRIHILPSMNPD 79 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~-~d~~~~~ll~~~~i~iiP~~NPD 79 (315)
+|+|||+|++|+||++++.+..+||.|+++|+||||||+|++++++++++||.+|. .|+.++++|++++|+|||++|||
T Consensus 33 ~S~eGR~I~~l~Is~~~~~~~~~kP~v~i~g~iHg~E~ig~~~~l~l~~~L~~~y~~~d~~v~~LLd~~~i~IvP~~NPD 112 (402)
T cd03865 33 RSFEGRELLVIEMSDNPGEHEPGEPEFKYIGNMHGNEAVGRELLIYLAQYLCNEYQKGNETIINLIHSTRIHIMPSLNPD 112 (402)
T ss_pred cccCCCeEEEEEeecCCCCCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcccCCHHHHHHHhcCEEEEEeeeCCc
Confidence 69999999999999877766678999999999999999999999999999999985 58999999999999999999999
Q ss_pred hhhhhhcc---cccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcc--eeeecCCCC
Q psy7350 80 GYEVAREG---QCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGAL--VASYPFDNT 154 (315)
Q Consensus 80 G~~~~~~~---~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~--~~~~P~~~~ 154 (315)
||++..+. .+.|+++|.|++|||||||||+.+.... ..|. +++.. ....|.+..
T Consensus 113 G~e~~~~~~~~~~~w~~~R~Na~GvDLNRNFp~~~~~~~---~~~~------------------~~~~~~~~~~~~~~~~ 171 (402)
T cd03865 113 GFEKAASQPGELKDWFVGRSNAQGIDLNRNFPDLDRIVY---VNER------------------EGGPNNHLLKNMKKAV 171 (402)
T ss_pred hHHhhhhcCccccchhhhcccccCcccCCCCCcccchhh---hhhc------------------cCCCcccccccccccc
Confidence 99987653 3679999999999999999997422100 0000 00000 000000000
Q ss_pred CCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhh
Q psy7350 155 PNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSR 234 (315)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~ 234 (315)
. .....+|||+|||+|+++++|+||+++|||++||+||||.++... ...++++|||++||+||.+||.
T Consensus 172 ~--------~~~~~~pEt~Avm~w~~~~~FvlsanlHgG~lva~YP~D~~~~~~----~~~~s~~pDd~~f~~lA~~Ya~ 239 (402)
T cd03865 172 D--------ENTKLAPETKAVIHWIMDIPFVLSANLHGGDLVANYPYDETRSGS----AHEYSACPDDAIFKSLARAYSS 239 (402)
T ss_pred c--------cccCCChHHHHHHHHHHhCCcEEEEEccCccEEEECCCCCCCCCC----cccccCCCChHHHHHHHHHHHh
Confidence 0 012358999999999999999999999999999999999986532 1346899999999999999999
Q ss_pred hCccccCCC--CCCCC--CCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhh
Q psy7350 235 NHPTMATGL--ACKSN--TPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDR 310 (315)
Q Consensus 235 ~~~~m~~g~--~~~~~--~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~ 310 (315)
+|++|+.+. +|... .+.|..||+|||.||+++||||||.|.+++|+++|+||+|||||++++|+.+|++||+|||.
T Consensus 240 ~h~~m~~~~~~~c~~~~~~~~f~~GitNGa~Wy~~~GgmqD~ny~~~nc~eiT~El~c~K~P~~~~L~~~W~~n~~all~ 319 (402)
T cd03865 240 LNPAMSDPNRPPCRKNDDDSSFVDGTTNGGAWYSVPGGMQDFNYLSSNCFEITVELSCDKFPPEETLKQYWEDNKNSLVN 319 (402)
T ss_pred hCHHhhcCCCCCCCCCCccccCCCCeecCceecccCCcccchhhhccCceEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999743 58764 46789999999999999999999999999999999999999999999999999999999985
No 3
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=100.00 E-value=1.8e-72 Score=538.07 Aligned_cols=276 Identities=46% Similarity=0.769 Sum_probs=229.1
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcC-CChHHHHhhcCceEEEEcCCCch
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYN-TDPYIKWLLDNTRIHILPSMNPD 79 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~-~d~~~~~ll~~~~i~iiP~~NPD 79 (315)
+|+|||+|++|+|+++++.+...||+|+++|+||||||+|++++++|+++||++|. .|++++++|++++|+|||++|||
T Consensus 29 ~SveGR~i~~l~is~~~~~~~~~kp~v~~~g~iHg~E~ig~e~ll~l~~~L~~~y~~~d~~v~~lL~~~~i~ivP~~NPD 108 (392)
T cd03864 29 RSVEGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVLGRELLIQLSEFLCEEYRNGNERITRLIQDTRIHILPSMNPD 108 (392)
T ss_pred eccCCceEEEEEecCCCccccCCCCEEEEEcccCCCcHHHHHHHHHHHHHHHHhcccCCHHHHHHHhcCeEEEEeeeCCc
Confidence 69999999999999877666678999999999999999999999999999999986 58999999999999999999999
Q ss_pred hhhhhhccccc---CCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCCC
Q psy7350 80 GYEVAREGQCE---GGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPN 156 (315)
Q Consensus 80 G~~~~~~~~~~---~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~ 156 (315)
|++++++.++. |..+|.|++|||||||||..|.... + .++. +|...-.|+...
T Consensus 109 G~e~~~~~~~~~~~~~~~R~Na~GVDLNRNFp~~~~~~~-----~-------~~~~----------~g~~~~~P~~~~-- 164 (392)
T cd03864 109 GYEVAARQGPEFNGYLVGRNNANGVDLNRNFPDLNTLMY-----Y-------NEKY----------GGPNHHLPLPDN-- 164 (392)
T ss_pred hHHhhhccCCCcCccccccccccCcccccCCCcccccch-----h-------hhcc----------CCccccCCCccc--
Confidence 99998775543 4467999999999999997542110 0 0000 000001122111
Q ss_pred ChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccc-cCCCCCCCCCHHHHHHHHHHHhhh
Q psy7350 157 SSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQS-YSSAPSLTPDDDVFKHLALTYSRN 235 (315)
Q Consensus 157 ~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~-~~~~~~~~pD~~~~~~la~~~a~~ 235 (315)
+ .+..+||++||++|+++++|++++++|||+++++||||.++.....+ ....++++|||++||+||++||.+
T Consensus 165 ---~----~~~~epET~Av~~~~~~~~fvls~nlHgG~~v~~YPyd~~~~~~~~~~~~~~~~~tpDd~~f~~la~~ya~~ 237 (392)
T cd03864 165 ---W----KSQVEPETLAVIQWMQNYNFVLSANLHGGAVVANYPYDKSREPRVRGFRRTAYSPTPDDKLFQKLAKTYSYA 237 (392)
T ss_pred ---c----ccccCHHHHHHHHHHHhcCcEEEEEccCCceeeeCCcccccccccccccccccCCCCChHHHHHHHHHHHHh
Confidence 0 13468888888888888899999999999999999999886532111 123468999999999999999999
Q ss_pred CccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhh
Q psy7350 236 HPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDR 310 (315)
Q Consensus 236 ~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~ 310 (315)
|++|..|.+|.. .|..||+|||.||+++||||||+|.+++||++|+||+|||||++++|+.+|++||+|||.
T Consensus 238 h~~m~~~~~c~~---~f~~gitnGa~wy~~~GgmqD~~Y~~~nc~e~t~el~c~k~p~~~~l~~~w~~n~~all~ 309 (392)
T cd03864 238 HGWMHKGWNCGD---YFDEGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPPEEELEREWLGNREALIS 309 (392)
T ss_pred CCcccCCCCCcc---cCCCCcccCceeEecCCCchhhhhhccCeeEEEEeccccCCCCHHHHHHHHHHHHHHHHH
Confidence 999999988953 688999999999999999999999999999999999999999999999999999999985
No 4
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=100.00 E-value=2.6e-72 Score=534.73 Aligned_cols=255 Identities=52% Similarity=0.911 Sum_probs=231.9
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++|+++++.+..+||+|+++|+||||||+|++++++|+++|+++|+.|++++++|++++|+|||++||||
T Consensus 34 ~S~eGR~I~~l~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~~l~li~~L~~~y~~d~~v~~ll~~~~i~IvP~~NPDG 113 (375)
T cd03863 34 KSVELRELYVMEISDNPGIHEPGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDG 113 (375)
T ss_pred cCCccceEEEEEEecCCCcccCCCCeEEEEccccCCcHHHHHHHHHHHHHHHHhccCCHHHHHHHhCCEEEEEeccCCch
Confidence 69999999999999876555568999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCCCChhH
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSSEY 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~ 160 (315)
|+++++++|.|+++|.|++|||||||||..|......+||||+||++|+.+++|+++++||+++++++|||+++..
T Consensus 114 ~e~~~~~~~~~~~~R~n~~GVDLNRNfp~~~~~~~~~~EpEt~Av~~~~~~~~f~l~~~lHsg~~~~~yPy~~~~~---- 189 (375)
T cd03863 114 YEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPETLAVMSWLKSYPFVLSANLHGGSLVVNYPFDDDEQ---- 189 (375)
T ss_pred HHheecCCcccccccccCCCcccccCCccccccCCCCCcHHHHHHHHHHhhCCceEEEEecCCCEEEEccCcCCCc----
Confidence 9999999999999999999999999999999877778899999999999988888888888887777777776531
Q ss_pred HhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCcccc
Q psy7350 161 LELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMA 240 (315)
Q Consensus 161 ~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~ 240 (315)
.. ..+.++||+++|+.||++||.+|+.|.
T Consensus 190 ----------------------------------------------~~-----~~~~~~pd~~~~~~la~~~a~a~~~m~ 218 (375)
T cd03863 190 ----------------------------------------------GI-----AIYSKSPDDAVFQQLALSYSKENKKMY 218 (375)
T ss_pred ----------------------------------------------cc-----ccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 00 113579999999999999999999999
Q ss_pred CCCCCCCC--CCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhh
Q psy7350 241 TGLACKSN--TPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDR 310 (315)
Q Consensus 241 ~g~~~~~~--~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~ 310 (315)
.|.+|... ...|..||+||+.||+++|||+||+|.+++|+++|+||+|||||++++|+.+|++||+|||.
T Consensus 219 ~~~~c~~~~~~~~~~~Gi~nga~wY~~~GgmqDw~y~~~~~~e~T~El~~~k~p~~~~l~~~w~~n~~all~ 290 (375)
T cd03863 219 QGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKEEELPKYWEQNRRSLLQ 290 (375)
T ss_pred cCCCCccccccccCCCCccCCceEEecCCChhhhhhhhcCeEEEEEecCcccCCCHHHHHHHHHHHHHHHHH
Confidence 98889743 33578999999999999999999999999999999999999999999999999999999985
No 5
>KOG2649|consensus
Probab=100.00 E-value=5.2e-71 Score=521.76 Aligned_cols=274 Identities=50% Similarity=0.832 Sum_probs=240.8
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
||+|||+||+++|++.|+++..++|.+.++|+|||+|.+|.|+++.++++||.+|++|+++++|+++++|+|+|.|||||
T Consensus 97 kSv~Gr~L~Vle~sd~PgeH~~gePEfKyv~nmHGnE~vGRElll~L~e~Lc~~y~~n~~i~~Lv~~trIHlmPSmNPDG 176 (500)
T KOG2649|consen 97 KSVEGRELWVIEISDRPGEHEPGEPEFKYIGNMHGNEVVGRELLLRLAEYLCDNYGKDPRITQLVNNTRIHIMPSMNPDG 176 (500)
T ss_pred ccccCceEEEEEcCCCCCcccCCCCcceeeeeccccccccHHHHHHHHHHHHHhcCCChHHHHHHhhceEEEecccCcch
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCCCChhH
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSSEY 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~ 160 (315)
|+....++|.|.-+|.|++|+|||||||+.+..-...++ + +. |..+-..
T Consensus 177 yE~a~~~~~~~~~GR~Nang~DLNrnFPd~~~~~~~~~~--~------~~-------------------~n~~l~~---- 225 (500)
T KOG2649|consen 177 YEIAKRGDRGWATGRNNANGVDLNRNFPDQFRLVYFIVT--F------DL-------------------LNSHLIM---- 225 (500)
T ss_pred hhhhhcccccceecccCccccchhccCcccccceeeeee--e------cc-------------------ccccccc----
Confidence 999999999999999999999999999986543221110 0 00 0000000
Q ss_pred HhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCcccc
Q psy7350 161 LELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMA 240 (315)
Q Consensus 161 ~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~ 240 (315)
..+.....+||+.||++|+.+.+|++|+++|||++||+||||..+... .+++++||+++|+.||+.||.+|+.|.
T Consensus 226 ~~~~~~~~~pEt~Avm~W~~~~pFvLSAnLHGG~lvanYPfD~~~~~~-----~~~s~tpDd~~F~~La~~YA~~h~~M~ 300 (500)
T KOG2649|consen 226 FNDDLNLRQPETIAVMKWLRDIPFVLSANLHGGALVANYPFDDTEDKR-----KYYSASPDDATFRFLARIYAKSHRNMS 300 (500)
T ss_pred ccccccccCccHHHHHHHHhhcceeeeccccCCceEEEccccCCcccc-----cccCCCCCcHHHHHHHHHHHhhChhhh
Confidence 112234568999999999999999999999999999999999987653 456899999999999999999999999
Q ss_pred CCCCCCCCCCCC-CCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhh
Q psy7350 241 TGLACKSNTPAF-KQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDR 310 (315)
Q Consensus 241 ~g~~~~~~~~~~-~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~ 310 (315)
.|..|......+ .+||+|||.||++.|||+||+|.++|||++||||||+|||++++|+.+|++||+|||.
T Consensus 301 ~~~~~~~~~~~~~~~GItNGA~Wy~v~GgMqDfnYLhTNCfEiTiElgC~KfP~e~eLp~~WE~Nr~sLl~ 371 (500)
T KOG2649|consen 301 LGKRCECDGNNGSVGGITNGASWYPVYGGMQDWNYLHTNCFEITLELSCEKFPKESELPTLWEYNRKSLLN 371 (500)
T ss_pred cCCCCcccccCCCcCceecCcceeecCCcccchhhhhcCeEEEEEEeccccCCchhhhHHHHHhhHHHHHH
Confidence 999876533222 3799999999999999999999999999999999999999999999999999999985
No 6
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=100.00 E-value=5.2e-70 Score=517.79 Aligned_cols=249 Identities=38% Similarity=0.684 Sum_probs=227.5
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|+++++.+..+||.|+++|+||||||+|++++++++++|+..|+.|+.++++|++++|+|||++||||
T Consensus 30 ~S~eGR~l~~l~Is~~~~~~~~~kp~v~~~~giHg~E~ig~e~~l~l~~~L~~~y~~d~~v~~ll~~~~i~ivP~~NPDG 109 (363)
T cd06245 30 QSVEFRPILSLEISNKPNNSEPEEPKIRFVAGIHGNAPVGTELLLALAEFLCMNYGKNPAVTKLIDRTRIVIVPSLNPDG 109 (363)
T ss_pred ecCCCceEEEEEecCCCCCCCCCCCEEEEECCccCCcHHHHHHHHHHHHHHHHHccCCHHHHHHHhCCEEEEEeccCCch
Confidence 69999999999999877655678999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCCCChhH
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSSEY 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~ 160 (315)
++++++.++.+..+|.||+|||||||||..|.|..+++||||+||++|+.+.+|+++++||+|+++++|||+++.
T Consensus 110 ~e~~~~~~~~~~~~r~na~GvDLNRNf~~~~~g~~~~sepEt~Av~~~~~~~~f~l~~~lH~~~~~~~yPy~~~~----- 184 (363)
T cd06245 110 REKAQEKQCTSKEGHTNAHGKDLDTDFTSNASNMSADVQPETKAIIDNLISKDFTLSVALDGGSVVATYPYDKPV----- 184 (363)
T ss_pred HHHeecCCCcccCCCCCcccccCCCCCCcccCCCCCCCcHHHHHHHHHHHhCCceEEEEEcCCcEEEEecCCCCC-----
Confidence 999988776555568899999999999999999999999999999999998888888888888888777777541
Q ss_pred HhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCcccc
Q psy7350 161 LELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMA 240 (315)
Q Consensus 161 ~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~ 240 (315)
..+||++.|+.||++||.+|+.|+
T Consensus 185 --------------------------------------------------------~~~pd~~~~~~la~~~a~ah~~m~ 208 (363)
T cd06245 185 --------------------------------------------------------QTVENKETLKHLAKVYANNHPTMH 208 (363)
T ss_pred --------------------------------------------------------cCCCCHHHHHHHHHHHHHhChhhh
Confidence 247999999999999999999999
Q ss_pred CCCC-CCCC-CCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhh
Q psy7350 241 TGLA-CKSN-TPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDR 310 (315)
Q Consensus 241 ~g~~-~~~~-~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~ 310 (315)
.+.+ |... ...|..||+|||.||++.|||+||+|.+++|+++|+|++|||||++++|+.+|++||+|||.
T Consensus 209 ~~~~~c~~~~~~~~~~Gitnga~wy~~~g~mqd~~y~~~~~~e~t~e~~~~k~P~~~~l~~~w~~n~~all~ 280 (363)
T cd06245 209 LGQPGCPNNSDENIPGGVMRGAEWNSHLGSMKDFSVDFGHCPEITVYTSCCLFPSASQLPDLWAENKKSLLS 280 (363)
T ss_pred cCCCCCCCCcccccCCCccccceeecccCCcchhhhhhcCCceeEEEeccccCCCHHHHHHHHHHHHHHHHH
Confidence 7653 7643 45789999999999999999999999999999999999999999999999999999999985
No 7
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=100.00 E-value=6.9e-68 Score=505.72 Aligned_cols=256 Identities=58% Similarity=1.067 Sum_probs=232.0
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+||+.+..+..++|.|+++|+||||||+|++++++++++|+.+|+.|+.++++|++++|+|||++||||
T Consensus 33 ~S~eGR~i~~l~ig~~~~~~~~~~P~v~~~~~iHg~E~ig~~~~l~l~~~L~~~y~~d~~i~~lL~~~~i~ivP~~NPDG 112 (376)
T cd03866 33 QSVEGRELWVLVLGRFPREHRIGIPEFKYVANMHGNEVVGRELLLHLIDYLVTSYGSDPVITRLLNSTRIHIMPSMNPDG 112 (376)
T ss_pred ccCCCceEEEEEeccCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHHHHhcCCCHHHHHHHhCCEEEEEeccCCch
Confidence 69999999999999866544567999999999999999999999999999999998999999999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCCCChhH
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSSEY 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~ 160 (315)
+++++ .+|.|+++|.|++|||||||||..|......+||||+|+++|+.+.+|+++++||+++++++|||+++....
T Consensus 113 ~e~~~-~~~~~~~~R~N~~GvDLNRnf~~~w~~~~~~sepEt~al~~~~~~~~~~l~~~~H~~~~~~~YP~~~~~~~~-- 189 (376)
T cd03866 113 FEASK-PDCYYSVGRYNKNGYDLNRNFPDAFEENNEQRQPETRAVMEWLKSETFVLSANLHGGALVASYPYDNGNGGT-- 189 (376)
T ss_pred hhhcc-cccccccccccCCCcccCcCchhhhccCCCCCcHHHHHHHHHHHhcCcEEEEEccCCceEEeccccCCCCcc--
Confidence 99985 689999999999999999999999987777899999999999999999999999999999999998763200
Q ss_pred HhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCcccc
Q psy7350 161 LELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMA 240 (315)
Q Consensus 161 ~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~ 240 (315)
+. ......+||+++|+.||++||.+|+.|.
T Consensus 190 -------------------------------~~-------------------~~~~~~~pd~~~~~~la~~~a~~~~~~~ 219 (376)
T cd03866 190 -------------------------------GQ-------------------QGYRSVSPDDDVFVHLAKTYSYNHANMY 219 (376)
T ss_pred -------------------------------cc-------------------ccCCCCCCCHHHHHHHHHHHHHhCHHhh
Confidence 00 0112468999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhh
Q psy7350 241 TGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDR 310 (315)
Q Consensus 241 ~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~ 310 (315)
.|.+|.. ...|..||+||+.||+++|||+||+|.+.+|++||+||+|+||||+++|+.+|++||+|||.
T Consensus 220 ~g~~~~~-~~~~~~Gi~nga~~Y~~sG~~~Dw~y~~~~~~~~T~El~~~k~p~~~~l~~~w~~n~~~ll~ 288 (376)
T cd03866 220 KGNHCSD-KQSFPSGITNGYQWYPLQGGMQDYNYVWAQCFEITLELSCCKYPPEEQLPAFWEDNKAALIE 288 (376)
T ss_pred CCCCCCc-cccCCCCcccceEEEEcCCCchhhhhhhCceEEEEEEecCCCCCCHHHHHHHHHHhHHHHHH
Confidence 8888865 35899999999999999999999999999999999999999999999999999999999975
No 8
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=100.00 E-value=4.6e-65 Score=489.84 Aligned_cols=256 Identities=47% Similarity=0.800 Sum_probs=220.6
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhc-CCChHHHHhhcCceEEEEcCCCch
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNY-NTDPYIKWLLDNTRIHILPSMNPD 79 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~-~~d~~~~~ll~~~~i~iiP~~NPD 79 (315)
+|+|||+|++|+|+++++.....||+|+|+|+||||||+|++++++|+++|+.+| ..|+.++++|++++|+|||++|||
T Consensus 29 ~S~EGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~~L~~~~~~~d~~v~~ll~~~~i~ivP~~NPD 108 (395)
T cd03867 29 RSFEGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQFLCSEYLLGNQRIQTLINTTRIHLLPSMNPD 108 (395)
T ss_pred ccCCCceEEEEEeccCCCcccccCCeEEEEccccCCcHHHHHHHHHHHHHHHHhhhcCCHHHHHHhhCcEEEEEeccCCc
Confidence 6999999999999987665556799999999999999999999999999999987 478999999999999999999999
Q ss_pred hhhhhhccc---ccCCCCCCcCCCcCCCCCCCccccC---------------CC------CCCCHHHHHHHHHHHhcceE
Q psy7350 80 GYEVAREGQ---CEGGQGRYNARGFDLNRNFPDYFKQ---------------NN------KRGQPETDAVKEWTSKIQFV 135 (315)
Q Consensus 80 G~~~~~~~~---~~~~~~R~n~~GvDLNRnfp~~~~g---------------~~------~~sepEt~al~~~~~~~~~~ 135 (315)
|++++++.+ +.|+++|.||+|||||||||..|.. +. +.+||||+||++|+.+++|+
T Consensus 109 G~e~~~~~~~~~~~wr~~R~n~~GvDLNRNf~~~~~~~~~~~~~~g~~~~~~p~p~~~~~~~sepEt~Av~~~~~~~~~~ 188 (395)
T cd03867 109 GYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDHIPIPDSYWFGKVAPETKAVMKWMRSIPFV 188 (395)
T ss_pred hHHhhhhcCccccccccCCcCCCCcccccCCCcchhhhcchhhcccccccCCCCccccccCccCHHHHHHHHHHhhCCce
Confidence 999998776 4799999999999999999988742 11 24688888888888888888
Q ss_pred EEEeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCC
Q psy7350 136 LSGGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSA 215 (315)
Q Consensus 136 ~~idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~ 215 (315)
++++||+++++++|||+++.+.. ....
T Consensus 189 l~~s~Hs~~~~~~yP~~~t~~~~-----------------------------------------------------~~~~ 215 (395)
T cd03867 189 LSASLHGGDLVVSYPYDFSRHPL-----------------------------------------------------EEKM 215 (395)
T ss_pred EEEEccCcceeEEcccccccCcc-----------------------------------------------------cccc
Confidence 88888888888888887763210 0011
Q ss_pred CCCCCCHHHHHHHHHHHhhhCccccCCC--CCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCC
Q psy7350 216 PSLTPDDDVFKHLALTYSRNHPTMATGL--ACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPP 293 (315)
Q Consensus 216 ~~~~pD~~~~~~la~~~a~~~~~m~~g~--~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~ 293 (315)
++++||++.|+.||++||.+|+.|..|. .|+.. ..+.+||+||+.||+++|||+||+|.+.+|++||+||+|+||||
T Consensus 216 ~~~~~d~~~~~~lA~~~a~a~~~~~~~~~~~~~~~-~~~~g~i~~ga~~Y~~sG~~~Dw~y~~~~~~~~T~EL~~~~~pp 294 (395)
T cd03867 216 FSPTPDEKVFKMLARTYADAHPTMSDRSTRRCGGN-FHKRGGIINGAEWYSFSGGMSDFNYLHTNCFEVTVELGCDKFPP 294 (395)
T ss_pred cCCCCcHHHHHHHHHHHHHhCccccCCCCCCCccc-cccCCCceecceeeEcCCCcchhhhhccCceEEEEEecCCCCCC
Confidence 3579999999999999999999998754 46542 33568899999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhHHHHhh
Q psy7350 294 ASELPKMWEENRLRFDR 310 (315)
Q Consensus 294 ~~~l~~~w~~n~~~ll~ 310 (315)
+++|+++|++|+++|+.
T Consensus 295 ~~~i~~~~~e~~~~l~~ 311 (395)
T cd03867 295 EEELYTIWQENKEALLS 311 (395)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999975
No 9
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=100.00 E-value=6.7e-65 Score=486.54 Aligned_cols=256 Identities=50% Similarity=0.921 Sum_probs=231.7
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++||+.+......||.|+|+|+||||||+|++++++|+++|+.+|..|+.++++|++++|+|||++||||
T Consensus 29 ~S~eGR~i~~l~is~~~~~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~~L~~~y~~d~~~~~ll~~~~~~ivP~~NPDG 108 (372)
T cd03868 29 RSVEGRELWVLRITDNVNRREPGEPMFKYVGNMHGDETVGRQVLIYLAQYLLENYGGDERVTELVNTTDIYLMPSMNPDG 108 (372)
T ss_pred ccCCCceEEEEEEecCCCCCCCCCCeEEEECCcCCCcHHHHHHHHHHHHHHHHhcccCHHHHHHHhCCEEEEEeeeCCch
Confidence 69999999999999876554567999999999999999999999999999999998999999999999999999999999
Q ss_pred hhhhhccc--ccCCCCCCcCCCcCCCCCCCccccCC---CCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCC
Q psy7350 81 YEVAREGQ--CEGGQGRYNARGFDLNRNFPDYFKQN---NKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTP 155 (315)
Q Consensus 81 ~~~~~~~~--~~~~~~R~n~~GvDLNRnfp~~~~g~---~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~ 155 (315)
++++++++ +.|+++|.||+|||||||||..|.+. .+++||||+|+++|+.+++|++++++|+++++++|||+++.
T Consensus 109 ~~~~~~~~~~~~~~~~R~n~~GvDLNRnf~~~~~~~~~~~~~sepEt~av~~~~~~~~~~l~~~lH~~~~~~~yP~~~~~ 188 (372)
T cd03868 109 FERSQEGDCSCGGYGGRENANNVDLNRNFPDQFEGKLQRLSERQPETVAMMKWIRSNPFVLSGNLHGGSVVASYPYDDSS 188 (372)
T ss_pred HHhhcccCccccCCCccCCCCCccCCCCCCcccCCcCCCCCCCCHHHHHHHHHHhhCCcEEEEEccCccEEEeccccccC
Confidence 99998887 68999999999999999999999764 68999999999999999999999999999999999999864
Q ss_pred CChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhh
Q psy7350 156 NSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRN 235 (315)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~ 235 (315)
... + ...+.++||++.|+.||+.||.+
T Consensus 189 ~~~-----------------------------------------~------------~~~~~~~pd~~~~~~la~~~a~~ 215 (372)
T cd03868 189 SHN-----------------------------------------E------------CGVYSKSPDDAVFKYLALTYANN 215 (372)
T ss_pred CCC-----------------------------------------C------------CcccCCCCCHHHHHHHHHHHHhh
Confidence 210 0 01124689999999999999999
Q ss_pred CccccCCCC-CCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhhc
Q psy7350 236 HPTMATGLA-CKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDRG 311 (315)
Q Consensus 236 ~~~m~~g~~-~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~~ 311 (315)
|+.|..|.+ |. ...|..|+++|+.||+++|||+||+|.+.+|++||+||+|+|+||+++|+.+|++||+|||.-
T Consensus 216 ~~~~~~~~~~~~--~~~~~~G~~~~~~~Y~~~G~~~Dw~y~~~~~~~~T~El~~~~~p~~~~l~~~w~~n~~al~~~ 290 (372)
T cd03868 216 HPTMRTGKPCCE--GETFKDGITNGAHWYDVPGGMQDYNYLHSNCFEITLELSCCKYPPASELPEEWNNNRESLLAY 290 (372)
T ss_pred CHHhhCCCCCCc--cccCCCCcccCceeeeCCCCcchhhhhccCeeEEEEEecCCCCCCHHHHHHHHHHhHHHHHHH
Confidence 999987655 43 357899999999999999999999999999999999999999999999999999999999763
No 10
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=100.00 E-value=5e-61 Score=460.71 Aligned_cols=257 Identities=60% Similarity=1.036 Sum_probs=233.4
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcC-CChHHHHhhcCceEEEEcCCCch
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYN-TDPYIKWLLDNTRIHILPSMNPD 79 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~-~d~~~~~ll~~~~i~iiP~~NPD 79 (315)
+|+|||+|++++|++++......||.|+|+|++|||||+|++++++|+++|+.++. .|+.++++|++++|+|||++|||
T Consensus 29 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~~L~~~~~~~d~~~~~ll~~~~~~ivP~~NPD 108 (374)
T cd03858 29 KSVQGRDLWVLEISDNPGVHEPGEPEFKYVGNMHGNEVVGRELLLRLAQYLCENYGAGDPRITRLVDNTRIHIMPSMNPD 108 (374)
T ss_pred cCCCCCEEEEEEEecCCCCCCCCCceEEEeccccCCchhHHHHHHHHHHHHHHHhccCCHHHHHHHhCCEEEEEcccCCc
Confidence 69999999999999876544457999999999999999999999999999999887 89999999999999999999999
Q ss_pred hhhhhhcccccCCCCCCcCCCcCCCCCCCcccc-----CCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCC
Q psy7350 80 GYEVAREGQCEGGQGRYNARGFDLNRNFPDYFK-----QNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 154 (315)
Q Consensus 80 G~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~-----g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~ 154 (315)
|++++++.+|.|+++|.|+.|||||||||..|. |+.+++||||++|++|+.+++|++++|+|+++++++|||+++
T Consensus 109 G~~~~~~~~~~w~~~R~n~~GvDLNRnf~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~i~~Hs~~~~~~yp~~~~ 188 (374)
T cd03858 109 GYEKAAEGDCGGLTGRYNANGVDLNRNFPDLFFTNYRSSDNGPRQPETKAVMNWIKSIPFVLSANLHGGALVANYPYDDS 188 (374)
T ss_pred hhhhhcccCCcccccCCCCcceecccCCCcccccccccCCCcccCHHHHHHHHHHhhCCceEEEEccCCceEEEcccccC
Confidence 999999999999999999999999999999985 468899999999999999999999999999999999999987
Q ss_pred CCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhh
Q psy7350 155 PNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSR 234 (315)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~ 234 (315)
.+. + . ....++||+++|+.||+.||.
T Consensus 189 ~~~-----------------------------------~----~---------------~~~~~~~d~~~~~~la~~~a~ 214 (374)
T cd03858 189 PSG-----------------------------------K----R---------------TAYSATPDDELFRYLAKTYAD 214 (374)
T ss_pred CCc-----------------------------------c----c---------------cCCCCCCCHHHHHHHHHHHHH
Confidence 421 0 0 012468999999999999999
Q ss_pred hCccccCCCC-CCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHHhhc
Q psy7350 235 NHPTMATGLA-CKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRFDRG 311 (315)
Q Consensus 235 ~~~~m~~g~~-~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~ll~~ 311 (315)
+|+.|..+.. |++....|..|+++++.||+++|+|+||+|...++++||+||+|+|+||+++|..+|++|+++|+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~y~~G~~~~~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~p~~~~i~~i~~en~~all~l 292 (374)
T cd03858 215 AHPTMHKGGPCCCNDDEEFPGGITNGAAWYSVTGGMQDWNYLHTNCFEITLELSCCKFPPASELPKYWEENREALLAY 292 (374)
T ss_pred hCHHhcCCCCCCCcccccCCCCcEEcceeeEcCCCchhhhhhccCceEEEEeccCCCCCChhHhHHHHHHHHHHHHHH
Confidence 9999997543 4555678999999999999999999999999999999999999999999999999999999998763
No 11
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=100.00 E-value=1e-55 Score=408.56 Aligned_cols=230 Identities=23% Similarity=0.391 Sum_probs=202.0
Q ss_pred CCceEEEEEEeCCCCC-CCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhh
Q psy7350 4 TRRDLWVMVVSASPYE-HMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYE 82 (315)
Q Consensus 4 eGR~i~~l~i~~~~~~-~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~ 82 (315)
|||+|++|+|++.... ....||.|+|+|++|||||+|++++++++++|+..|..|+.++++|++++|+|||++||||++
T Consensus 21 eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~~~~~d~~v~~lL~~~~i~ivP~~NPDG~~ 100 (293)
T cd06226 21 AGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLEGYGTDADATWLLDYHEIHVVPIVNPDGRK 100 (293)
T ss_pred CCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcccCHHHHHHHhcCeEEEEecccCCcce
Confidence 9999999999975431 345799999999999999999999999999999999889999999999999999999999999
Q ss_pred hhhcccccCCCCCC---------cCCCcCCCCCCCcccc---------------CCCCCCCHHHHHHHHHHHhcc-----
Q psy7350 83 VAREGQCEGGQGRY---------NARGFDLNRNFPDYFK---------------QNNKRGQPETDAVKEWTSKIQ----- 133 (315)
Q Consensus 83 ~~~~~~~~~~~~R~---------n~~GvDLNRnfp~~~~---------------g~~~~sepEt~al~~~~~~~~----- 133 (315)
++++ ++.|||+|. |+.|||||||||..|. |+.|+|||||+||++|+.+..
T Consensus 101 ~~~~-~~~wRkNr~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~~~~p~~~~y~G~~p~SEpEt~Av~~~~~~~~~~~~~ 179 (293)
T cd06226 101 IAEQ-GLSQRKNANTSGGSNCSGSSYGVDLNRNYSFGWGGAGASSGDPCSETYRGPAPGSEPETAALEDYIRGLFPDQRG 179 (293)
T ss_pred eecc-CcceeccCCCCCCCCccccccccccccCCCCcCCcCCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhccccccc
Confidence 9876 678998874 3589999999998874 567899999999999999975
Q ss_pred -----------eEEEEeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCC
Q psy7350 134 -----------FVLSGGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFD 202 (315)
Q Consensus 134 -----------~~~~idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd 202 (315)
+.++||+|+++++++|||+++.
T Consensus 180 ~~~~~~~~~~~~~~~l~~HS~g~~i~~P~g~~~----------------------------------------------- 212 (293)
T cd06226 180 PGDTDPAPDDTTGVYLDIHSYSNLVLYPWGWTT----------------------------------------------- 212 (293)
T ss_pred cccccccccccceEEEEeccCCCeEeecCcCCC-----------------------------------------------
Confidence 7889999999999999998652
Q ss_pred CCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEE
Q psy7350 203 NTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEV 282 (315)
Q Consensus 203 ~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~ 282 (315)
..+||.+.|+.||+.++..+ .|.. .++..||+++|+++||+|...|+++|
T Consensus 213 --------------~~~p~~~~~~~la~~~~~~~--------------gy~~--~~~~~~Y~~~G~~~Dw~y~~~gi~s~ 262 (293)
T cd06226 213 --------------QPAPNDTQLRALGRKFASFN--------------GYTP--QQSVGLYPTDGTTDDWSYGELGVAAY 262 (293)
T ss_pred --------------CCCCCHHHHHHHHHHHhhcC--------------Cccc--cccceEEecCCChhHhHhhcCCceEE
Confidence 24789999999999987522 2332 34668999999999999999999999
Q ss_pred EEeeccCCCCCCCCc-hHHHHHhHHHHhhc
Q psy7350 283 TLELSCCKFPPASEL-PKMWEENRLRFDRG 311 (315)
Q Consensus 283 t~El~~~~~p~~~~l-~~~w~~n~~~ll~~ 311 (315)
|+||++++||+.+++ +.+|++||+|||.+
T Consensus 263 TiElg~~~~~~~~~~~~~~~~~n~~~~~~~ 292 (293)
T cd06226 263 TFEIGTSFFQSCSSFESGILPDNRPALYYA 292 (293)
T ss_pred EEEccCCCCCCcccccccccccCHHHHhhc
Confidence 999999999998876 79999999999864
No 12
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=100.00 E-value=3.1e-55 Score=407.86 Aligned_cols=233 Identities=25% Similarity=0.417 Sum_probs=207.1
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++|++++. ....||+|+|+|++||+||+|++++++++++|+.++..|+.++++|++++|+|||++||||
T Consensus 32 ~S~eGR~i~~l~i~~~~~-~~~~kp~i~i~~~iH~~E~~g~~~~l~~i~~L~~~~~~d~~~~~lL~~~~i~ivP~~NPDG 110 (295)
T cd03859 32 KSYEGRDIIAVKISDNVA-TDENKPEVLYTSTHHAREWLSLEMAIYLMHYLLENYGKDPRIQNLVDNRELWFVPVVNPDG 110 (295)
T ss_pred ecCCCCeEEEEEEecCCC-CCCCCCEEEEECCcCccchhhHHHHHHHHHHHHHhhccCHHHHHHHhcCeEEEEeeeCCCc
Confidence 699999999999998653 2357999999999999999999999999999999988899999999999999999999999
Q ss_pred hhhhhc--ccccCCCCCC-------cCCCcCCCCCCCcccc----------------CCCCCCCHHHHHHHHHHHhc-ce
Q psy7350 81 YEVARE--GQCEGGQGRY-------NARGFDLNRNFPDYFK----------------QNNKRGQPETDAVKEWTSKI-QF 134 (315)
Q Consensus 81 ~~~~~~--~~~~~~~~R~-------n~~GvDLNRnfp~~~~----------------g~~~~sepEt~al~~~~~~~-~~ 134 (315)
+++.++ .++.|||+|. +|.|||||||||..|. |+.|+|||||++|++|+.+. ++
T Consensus 111 ~~~~~~~~~~~~wrkn~~~~~~~~~~~~GvDLNRNf~~~w~~~~~g~s~~p~~~~y~G~~p~sepEt~av~~~~~~~~~~ 190 (295)
T cd03859 111 YEYDETTGGYRSWRKNRRDNSGDISSSDGVDLNRNYGYKWGYDSGGSSNDPSSETYRGPSAFSEPETQAIRDFVESHKNI 190 (295)
T ss_pred ceEEeeccCccceeccCCCCCCCcCcceeecCCCCCCcccCCCCCCCCCCCCCCCccCCCCCchHHHHHHHHHHHhCCCe
Confidence 999988 7899999873 6899999999998774 45799999999999999999 89
Q ss_pred EEEEeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCC
Q psy7350 135 VLSGGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSS 214 (315)
Q Consensus 135 ~~~idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~ 214 (315)
++++|+|+++++++|||+++.+.
T Consensus 191 ~~~l~~Hs~g~~i~~P~~~~~~~--------------------------------------------------------- 213 (295)
T cd03859 191 KTALNYHTYSNLWLYPYGYQYNE--------------------------------------------------------- 213 (295)
T ss_pred EEEEEeecCCceEEeCCcCCCCC---------------------------------------------------------
Confidence 99999999999999999876321
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeecc-----C
Q psy7350 215 APSLTPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSC-----C 289 (315)
Q Consensus 215 ~~~~~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~-----~ 289 (315)
..++||+..++.||+.++.++ .|..|.+ +.||+++|+++||+|.+.++++||+||++ +
T Consensus 214 -~~~~~d~~~~~~la~~~~~~~--------------~y~~~~~--~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~~~g 276 (295)
T cd03859 214 -PMPSKDEIDFVALGGTMAESN--------------GYTPKVS--SDLYTANGDADDWMYGRHKIISLTPEMGPESGGTG 276 (295)
T ss_pred -CCCCccHHHHHHHHHHHHHHh--------------CCcccCc--ceeEecCCchHHHHhhCCCcEEEEEEeCCCCCCCC
Confidence 025799999999999998763 3444543 47999999999999999999999999987 5
Q ss_pred CCCCCCCchHHHHHhHHHH
Q psy7350 290 KFPPASELPKMWEENRLRF 308 (315)
Q Consensus 290 ~~p~~~~l~~~w~~n~~~l 308 (315)
|+||+++|.++|++|+++|
T Consensus 277 f~~p~~~i~~~~~~~~~~~ 295 (295)
T cd03859 277 FYPPDEEISRETSRNYPAL 295 (295)
T ss_pred CcCCHHHHHHHHHhccCCC
Confidence 7899999999999999764
No 13
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=100.00 E-value=1e-54 Score=403.81 Aligned_cols=237 Identities=21% Similarity=0.270 Sum_probs=209.2
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|++++ ..||+|+|+|++|||||+|++++++++++|+..|+.|+.++++|++++|+|||++||||
T Consensus 34 ~S~eGR~I~~l~is~~~----~~kp~v~i~~giHarE~i~~~~~l~~~~~L~~~~~~d~~~~~lLd~~~i~ivP~~NPDG 109 (301)
T cd03870 34 RSYEGRPIYVLKFSTGG----SNRPAIWIDAGIHSREWITQATGVWFAKKITEDYGQDPSFTAILDSMDIFLEIVTNPDG 109 (301)
T ss_pred cCCCCCeEEEEEEecCC----CCCceEEEeccccccchhhHHHHHHHHHHHHHhcccCHHHHHHHHhCcEEEEeeecCch
Confidence 69999999999999754 37999999999999999999999999999999998899999999999999999999999
Q ss_pred hhhhhcccccCCCCCC-----cCCCcCCCCCCCcccc--------------CCCCCCCHHHHHHHHHHHhc-ceEEEEee
Q psy7350 81 YEVAREGQCEGGQGRY-----NARGFDLNRNFPDYFK--------------QNNKRGQPETDAVKEWTSKI-QFVLSGGL 140 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~-----n~~GvDLNRnfp~~~~--------------g~~~~sepEt~al~~~~~~~-~~~~~idl 140 (315)
++++++.+|.|||+|. +|.||||||||+..|. |+.|+|||||+||++|+.+. ++.++|++
T Consensus 110 ~~~s~~~~r~wrknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~Y~G~~pfSEpEt~av~~~~~~~~~~~~~l~l 189 (301)
T cd03870 110 YVFTHSQNRLWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCSETYHGPYANSEVEVKSIVDFVKSHGNFKAFISI 189 (301)
T ss_pred hhheecccceeecCCCCCCCCCccccccccCCCcccCcCCCCCCCCccccCCCCCCccHHHHHHHHHHhhCCCeEEEEEe
Confidence 9999999999999996 6999999999999884 56889999999999999987 69999999
Q ss_pred cCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCC
Q psy7350 141 HGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTP 220 (315)
Q Consensus 141 H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~p 220 (315)
|++|++++|||+++.. .+|
T Consensus 190 HS~g~~i~yP~~~~~~-------------------------------------------------------------~~~ 208 (301)
T cd03870 190 HSYSQLLLYPYGYTTQ-------------------------------------------------------------SIP 208 (301)
T ss_pred ccCCceEEecCcCCCC-------------------------------------------------------------CCC
Confidence 9999999999997631 357
Q ss_pred CHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeecc----CCCCCCCC
Q psy7350 221 DDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSC----CKFPPASE 296 (315)
Q Consensus 221 D~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~----~~~p~~~~ 296 (315)
|++.++.||+.++.+..... ...|..|.+. ..||+++|+++||+|...++++||+||++ +|+||+++
T Consensus 209 ~~~~~~~la~~~~~ai~~~~--------g~~y~~g~~~-~~~y~a~G~s~Dw~y~~~~~~s~t~El~~~g~~gF~lP~~~ 279 (301)
T cd03870 209 DKTELNQVAKSAVAALKSLY--------GTSYKYGSII-TTIYQASGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQ 279 (301)
T ss_pred CHHHHHHHHHHHHHHHHHhc--------CCcccccccc-ceeecCCCChhhhhhcCCCcEEEEEEeCCCCCCCCCCChHH
Confidence 88889999998877654321 1257766553 58999999999999999899999999975 57799999
Q ss_pred chHHHHHhHHHHhhc
Q psy7350 297 LPKMWEENRLRFDRG 311 (315)
Q Consensus 297 l~~~w~~n~~~ll~~ 311 (315)
|.++-++...++..-
T Consensus 280 i~p~~~E~~~~i~~~ 294 (301)
T cd03870 280 IIPTAQETWLGLLTI 294 (301)
T ss_pred CchhhHHHHHHHHHH
Confidence 999999998776543
No 14
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=100.00 E-value=4.7e-55 Score=405.63 Aligned_cols=237 Identities=21% Similarity=0.281 Sum_probs=206.5
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|+++. ..||.|+|+|++|||||+|++++++++++|+..|+.|+.++++|++++|+|||++||||
T Consensus 34 ~S~eGR~i~~l~i~~~~----~~kp~v~i~~giHarE~i~~~~~l~~i~~l~~~y~~d~~~~~lL~~~~~~ivP~~NPDG 109 (300)
T cd03871 34 TTFEGRPIYLLKVGKPG----VNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREAIMTELLDKLDFYVLPVLNIDG 109 (300)
T ss_pred eCCCCCeeEEEEEccCC----CCCCeEEEeccccccccccHHHHHHHHHHHHHHccCCHHHHHHHHcCeEEEEEeecCCc
Confidence 69999999999999752 47899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCCCCC-----cCCCcCCCCCCCcccc--------------CCCCCCCHHHHHHHHHHHhc--ceEEEEe
Q psy7350 81 YEVAREGQCEGGQGRY-----NARGFDLNRNFPDYFK--------------QNNKRGQPETDAVKEWTSKI--QFVLSGG 139 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~-----n~~GvDLNRnfp~~~~--------------g~~~~sepEt~al~~~~~~~--~~~~~id 139 (315)
|+++++.+|+|||+|. +|.|||||||||..|. |+.|+|||||+||++|+.+. .+.++|+
T Consensus 110 ~~~s~~~~r~wrknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~pc~~~Y~G~~p~SEpEt~Al~~~~~~~~~~~~~~l~ 189 (300)
T cd03871 110 YIYTWTKNRMWRKTRSTNAGSSCIGTDPNRNFNAGWCTVGASRNPCDETYCGSAPESEKETKALADFIRNNLSSIKAYLT 189 (300)
T ss_pred CeeeeccCHHHHHhcCCCCCCCccccccCcCCCCccCCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHhcCcceeEEEE
Confidence 9999999999999986 3789999999999884 57899999999999999986 4788999
Q ss_pred ecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCC
Q psy7350 140 LHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLT 219 (315)
Q Consensus 140 lH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~ 219 (315)
+|++|++++|||+++.. .+
T Consensus 190 ~HSyg~~i~~Py~~~~~-------------------------------------------------------------~~ 208 (300)
T cd03871 190 IHSYSQMLLYPYSYTYK-------------------------------------------------------------LP 208 (300)
T ss_pred eccCccEEEecCcCCCC-------------------------------------------------------------CC
Confidence 99999999999987521 35
Q ss_pred CCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeecc----CCCCCCC
Q psy7350 220 PDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSC----CKFPPAS 295 (315)
Q Consensus 220 pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~----~~~p~~~ 295 (315)
||++.++.||++.+.+...+ .|. .|..|.. ++.||+++|+++||+|...++++||+||++ +|.||++
T Consensus 209 ~~~~~~~~la~~~~~ai~~~-~g~-------~y~~g~~-~~~~Y~a~G~s~Dw~y~~~~~~s~t~El~~~g~~gf~lp~~ 279 (300)
T cd03871 209 ENHAELNSVAKGAVKELASL-YGT-------KYTYGPG-ATTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFLLPES 279 (300)
T ss_pred CCHHHHHHHHHHHHHHHHHh-hCC-------CCcCCcc-ccccccCCCCHHHHHhcCCCcEEEEEEeCCCCCCCCCCCHH
Confidence 78888999998876654332 222 3454533 578999999999999998889999999975 4779999
Q ss_pred CchHHHHHhHHHHhhc
Q psy7350 296 ELPKMWEENRLRFDRG 311 (315)
Q Consensus 296 ~l~~~w~~n~~~ll~~ 311 (315)
+|.+++++...++..-
T Consensus 280 ~I~~~~~E~~~~i~~~ 295 (300)
T cd03871 280 QIKPTCEETMLAVKYI 295 (300)
T ss_pred HCccccHHHHHHHHHH
Confidence 9999999998777543
No 15
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=100.00 E-value=1.2e-54 Score=403.51 Aligned_cols=241 Identities=22% Similarity=0.264 Sum_probs=209.5
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|++.+ ...||.|+|+|++|||||+|+++++++|++|+..|+.|+.++++|++++|+|||++||||
T Consensus 33 ~S~egR~I~~l~is~~~---~~~k~~v~i~~giHarE~i~~~~~l~~i~~Ll~~~~~d~~~~~lL~~~~i~ivP~~NPDG 109 (300)
T cd06246 33 SSFEKRPLYVLKVSGKE---QTAKNAIWIDCGIHAREWISPAFCLWFVGHATQFYGIDGQMTNLLRHMDFYIMPVMNVDG 109 (300)
T ss_pred cCCCCCeEEEEEEeCCC---CCCCCeEEEecccCccchhhHHHHHHHHHHHHHHhcCCHHHHHHHHhCeEEEEEeecCCc
Confidence 69999999999999753 247999999999999999999999999999999988999999999999999999999999
Q ss_pred hhhhhcccccCCCCCC-----cCCCcCCCCCCCcccc--------------CCCCCCCHHHHHHHHHHHhcc--eEEEEe
Q psy7350 81 YEVAREGQCEGGQGRY-----NARGFDLNRNFPDYFK--------------QNNKRGQPETDAVKEWTSKIQ--FVLSGG 139 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~-----n~~GvDLNRnfp~~~~--------------g~~~~sepEt~al~~~~~~~~--~~~~id 139 (315)
|+++++.+++|||+|. +|.|||||||||..|. |+.|+|||||+||++|+.+.. +.++|+
T Consensus 110 ~~~~~~~~r~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~p~SEpEt~av~~~~~~~~~~i~~~is 189 (300)
T cd06246 110 YDYTWKKNRMWRKNRSFYANSHCIGTDLNRNFDAKWCCEGASSSSCSETYCGPYPESEPEVKAVASFLRRHINQIKAYIS 189 (300)
T ss_pred eeEEEeccceeecCCCCCCCCCccCcccccccccccCCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhCCcceeEEEE
Confidence 9999999999999985 6899999999998884 567999999999999999874 788999
Q ss_pred ecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCC
Q psy7350 140 LHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLT 219 (315)
Q Consensus 140 lH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~ 219 (315)
+|+++++++|||+++.. .+
T Consensus 190 ~Hs~g~~i~~P~~~~~~-------------------------------------------------------------~~ 208 (300)
T cd06246 190 MHSYSQMILFPYSYTRS-------------------------------------------------------------KS 208 (300)
T ss_pred eccCCcEEEeccccCCC-------------------------------------------------------------CC
Confidence 99999999999997631 35
Q ss_pred CCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeecc----CCCCCCC
Q psy7350 220 PDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSC----CKFPPAS 295 (315)
Q Consensus 220 pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~----~~~p~~~ 295 (315)
||.+.++.||+.++.+. ..-. ...|..|.. +..||+++|+++||+|...++++||+||++ +|.||++
T Consensus 209 ~~~~~~~~la~~~~~ai---~~~~-----~~~y~~g~~-~~~~Y~a~G~s~Dw~y~~~~~~s~t~El~~~g~~gF~lp~~ 279 (300)
T cd06246 209 KDHEELSLLAKEAVRAI---RRTS-----NNRYTHGSG-AETIYLAPGGSDDWAYDLGIKYSFTFELRDTGTYGFLLPES 279 (300)
T ss_pred CCHHHHHHHHHHHHHHH---HHhh-----CCCCeecCC-CCeeeccCCChhhHhhcCCCCEEEEEEecCCCCCCCCCCHH
Confidence 88899999999888653 2211 125666644 347999999999999998889999999976 5779999
Q ss_pred CchHHHHHhHHHHhhccCC
Q psy7350 296 ELPKMWEENRLRFDRGNCH 314 (315)
Q Consensus 296 ~l~~~w~~n~~~ll~~~~~ 314 (315)
+|.+..+|..+++..-..|
T Consensus 280 ~I~p~~~E~~~~~~~~~~~ 298 (300)
T cd06246 280 YIKPTCSEALAAVKKIAWH 298 (300)
T ss_pred HcccccHHHHHHHHHHHHh
Confidence 9999999999888765443
No 16
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=100.00 E-value=3.2e-54 Score=401.92 Aligned_cols=241 Identities=22% Similarity=0.287 Sum_probs=210.7
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|+++.+. ...||.|+|+|++|||||+|++++++++++|+..+..|+.++++|++++|+|||++||||
T Consensus 32 ~S~eGR~i~~l~I~~~~~~-~~~k~~v~i~~giHarE~~~~~~~l~~~~~L~~~~~~d~~~~~ll~~~~i~ivP~~NPDG 110 (304)
T cd06248 32 KSYEGRTILGLHIWGSGGE-KGSKPAIVIHGTVHAREWISTMTVEYLAYQLLTGYGSDATVTALLDKFDFYIIPVVNPDG 110 (304)
T ss_pred ECCCCCeEEEEEEecCCCC-CCCCcEEEEECCcCcCccccHHHHHHHHHHHHHhhccCHHHHHHHHhCcEEEEeeecCch
Confidence 5999999999999975431 357899999999999999999999999999999998899999999999999999999999
Q ss_pred hhhhhcccccCCCCCC-----cCCCcCCCCCCCcccc--------------CCCCCCCHHHHHHHHHHHhc----ceEEE
Q psy7350 81 YEVAREGQCEGGQGRY-----NARGFDLNRNFPDYFK--------------QNNKRGQPETDAVKEWTSKI----QFVLS 137 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~-----n~~GvDLNRnfp~~~~--------------g~~~~sepEt~al~~~~~~~----~~~~~ 137 (315)
++++++.++.|||+|. +|.|||||||||..|. |+.|+|||||++|++|+.++ +++++
T Consensus 111 ~~~~~~~~~~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~s~~Y~G~~~~sEpEt~av~~~~~~~~~~~~~~~~ 190 (304)
T cd06248 111 FVYTQTSDRLWRKNRQPTSGSSCVGTDLNRNWPYKWDGGGSSTNPCSETYRGESPGDAPEAKALAAFLNKLAEGQGIVGY 190 (304)
T ss_pred hhhhccchhhhhhcCCCCCCCCceeecCCCCCCCcccCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhccccCceEEE
Confidence 9999999999999995 5899999999998774 56789999999999999987 59999
Q ss_pred EeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCC
Q psy7350 138 GGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPS 217 (315)
Q Consensus 138 idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~ 217 (315)
+|+|+++++++|||+++.. .
T Consensus 191 l~~Hs~~~~i~~P~~~~~~------------------------------------------------------------~ 210 (304)
T cd06248 191 IDWHSYSQLILYPYGYSCD------------------------------------------------------------A 210 (304)
T ss_pred EEeccCcceEEecCcCCCC------------------------------------------------------------C
Confidence 9999999999999987632 1
Q ss_pred CCCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcc-eeEEEEeecc----CCCC
Q psy7350 218 LTPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYG-CMEVTLELSC----CKFP 292 (315)
Q Consensus 218 ~~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~-~~~~t~El~~----~~~p 292 (315)
.+||.+.|+.||..++.++.... ...|..|.+ .+.||+++|+++||+|...| +++||+||++ +|.|
T Consensus 211 ~~~d~~~~~~la~~~a~ai~~~~--------g~~y~~g~~-~~~~y~~~G~~~D~~y~~~gi~~~~t~El~~~~~~gf~~ 281 (304)
T cd06248 211 VPPNLENLEELAAGLAKAIRAVS--------GTTYTVGPA-CNTLYQTTGSSVDWVYHVAGAAWSYQLELRDTGTYGFVL 281 (304)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhc--------CCCCccccc-ccccccCCCCcchhhhccCCCcEEEEEEeCCCCCCCCCC
Confidence 36889999999999998653211 125776754 36899999999999999999 7999999975 5779
Q ss_pred CCCCchHHHHHhHHHHhhc
Q psy7350 293 PASELPKMWEENRLRFDRG 311 (315)
Q Consensus 293 ~~~~l~~~w~~n~~~ll~~ 311 (315)
|+++|.++.+++.+++..-
T Consensus 282 p~~~i~p~~~e~~~~~~~~ 300 (304)
T cd06248 282 PAKQIIPTGEETWAGIKYL 300 (304)
T ss_pred CHHHCcchhHHHHHHHHHH
Confidence 9999999999999887653
No 17
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=100.00 E-value=3.5e-54 Score=399.18 Aligned_cols=240 Identities=18% Similarity=0.221 Sum_probs=207.7
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|++... ..||.|+|+|++|||||+|++++++++++|+.+|+.|+.++++|++++|+|||++||||
T Consensus 32 ~S~EgR~I~~l~i~~~~~---~~k~~i~i~~giHarEwi~~~~~l~~i~~Ll~~y~~d~~~~~ll~~~~i~ivP~~NPDG 108 (298)
T cd06247 32 CTYELRPMYYLKIGWPSD---KPKKIIWMDCGIHAREWISPAFCQWFVKEILQNYKTDPILRKVLKNVDFYVLPVLNIDG 108 (298)
T ss_pred ECcCCceEEEEEeecCCC---CCCcEEEEeccccccccccHHHHHHHHHHHHHHhccCHHHHHHHhcCeEEEEeeecCCc
Confidence 699999999999996432 46899999999999999999999999999999998999999999999999999999999
Q ss_pred hhhhhcccccCCCCCC-----cCCCcCCCCCCCcccc--------------CCCCCCCHHHHHHHHHHHhcc--eEEEEe
Q psy7350 81 YEVAREGQCEGGQGRY-----NARGFDLNRNFPDYFK--------------QNNKRGQPETDAVKEWTSKIQ--FVLSGG 139 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~-----n~~GvDLNRnfp~~~~--------------g~~~~sepEt~al~~~~~~~~--~~~~id 139 (315)
|+++++.+|.|||+|. +|.||||||||+..|. |+.|+|||||+||++|+.+.+ +.++||
T Consensus 109 y~ys~~~~r~wRknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~pfSEpEt~ai~~~~~~~~~~i~~~l~ 188 (298)
T cd06247 109 YIYTWTTDRLWRKNRSPHNNGTCYGVDLNRNFNSQWCSIGASRNCRSNIFCGTGPESEPETKAVARLIESKKSDILCYLT 188 (298)
T ss_pred ceEEecccceecccCCCCCCCCccccccccCCCCccccCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhcCcceEEEEE
Confidence 9999999999999996 6899999999998874 567999999999999999986 556999
Q ss_pred ecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCC
Q psy7350 140 LHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLT 219 (315)
Q Consensus 140 lH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~ 219 (315)
+|++|++++|||+++.. ++
T Consensus 189 ~Hsyg~~i~~P~g~~~~-------------------------------------------------------------~~ 207 (298)
T cd06247 189 IHSYGQLILLPYGYTKE-------------------------------------------------------------PS 207 (298)
T ss_pred eccCCCeEEeCCcCCCC-------------------------------------------------------------CC
Confidence 99999999999998742 34
Q ss_pred CCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeecc----CCCCCCC
Q psy7350 220 PDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSC----CKFPPAS 295 (315)
Q Consensus 220 pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~----~~~p~~~ 295 (315)
||++.++.||+..+.+..... ...|..|.+ +..+|+++|+++||+|.....++||+||+. +|.||++
T Consensus 208 ~n~~~~~~~a~~~~~ai~~~~--------~~~y~~g~~-~~~~y~a~G~s~Dwa~~~~~~~s~t~El~~~g~~gF~lp~~ 278 (298)
T cd06247 208 SNHEEMMLVAQKAAAALKEKH--------GTEYRVGSS-ALILYSNSGSSRDWAVDIGIPFSYTFELRDNGTYGFVLPED 278 (298)
T ss_pred CCHHHHHHHHHHHHHHHHHhc--------CCCCccCCc-ccccccCCCChhhhhhccCCCEEEEEEeCCCCCCCCCCChH
Confidence 677778888887776532211 136777766 457999999999999987777999999974 5779999
Q ss_pred CchHHHHHhHHHHhhccC
Q psy7350 296 ELPKMWEENRLRFDRGNC 313 (315)
Q Consensus 296 ~l~~~w~~n~~~ll~~~~ 313 (315)
+|.++.+++.+++..-..
T Consensus 279 ~I~p~~~E~~~~i~~~~~ 296 (298)
T cd06247 279 QIQPTCEETMTAVMSMVE 296 (298)
T ss_pred HCcchhHHHHHHHHHHHh
Confidence 999999999988876443
No 18
>KOG2650|consensus
Probab=100.00 E-value=8.9e-55 Score=414.69 Aligned_cols=236 Identities=27% Similarity=0.377 Sum_probs=200.4
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|.+|+|+.+. ...||+|+|.||+||||||++++++++|.+|+..|+.|+.++++|++.+|+|+|++||||
T Consensus 149 ~s~EgR~i~~lkIs~~~---~~~k~~I~id~GiHAREWIspAta~~~i~qLv~~y~~~~~~~~ll~~~dwyI~Pv~NPDG 225 (418)
T KOG2650|consen 149 RSYEGRPLKVLKISGGD---NRNKKAIFIDAGIHAREWISPATALWFINQLVSSYGRDPAVTKLLDKLDWYILPVVNPDG 225 (418)
T ss_pred cccCCceEEEEEecCCC---CCCCceEEEecchhHHhhccHHHHHHHHHHHHhhhccCHHHHHHHhcCcEEEEeeecCCc
Confidence 58999999999998753 257999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccCCCCCC------cCCCcCCCCCCCcccc---------------CCCCCCCHHHHHHHHHHHhc--ceEEE
Q psy7350 81 YEVAREGQCEGGQGRY------NARGFDLNRNFPDYFK---------------QNNKRGQPETDAVKEWTSKI--QFVLS 137 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~------n~~GvDLNRnfp~~~~---------------g~~~~sepEt~al~~~~~~~--~~~~~ 137 (315)
|+|+++.+|+|||+|+ .|.||||||||+.+|. |+.|||||||+++.+|+.+. +++++
T Consensus 226 YeYS~t~~R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~~~Gas~~PCse~Y~G~~pfSEpEt~av~~fi~~~~~~i~~y 305 (418)
T KOG2650|consen 226 YEYSRTTDRLWRKNRSPNGCASRCIGVDLNRNFDFHWGGGKGASSDPCSETYAGPSPFSEPETRAVRDFITSFENNIKAY 305 (418)
T ss_pred ceeeecccccccccCCCCCCCCeeeCCCCCCCccCcCCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhcCcceEEE
Confidence 9999999999999996 2899999999999985 56899999999999999985 48999
Q ss_pred EeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCC
Q psy7350 138 GGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPS 217 (315)
Q Consensus 138 idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~ 217 (315)
|+||+|||+++|||+++...+
T Consensus 306 islHSYsQ~llyPyg~~~~~~----------------------------------------------------------- 326 (418)
T KOG2650|consen 306 ISLHSYSQLLLYPYGYTNDLP----------------------------------------------------------- 326 (418)
T ss_pred EEecccceeEEecccccCCCC-----------------------------------------------------------
Confidence 999999999999999986433
Q ss_pred CCCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcce-eEEEEeec----cCCCC
Q psy7350 218 LTPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGC-MEVTLELS----CCKFP 292 (315)
Q Consensus 218 ~~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~-~~~t~El~----~~~~p 292 (315)
+|.+-++.+|+..+.+.... .| ..|..|.+ +...|+++|+++||+|+..|+ ++||+||+ -+|.|
T Consensus 327 --~~~~dl~~va~~a~~ai~~~-~g-------t~Y~~G~~-~~~~y~asG~S~Dway~~~gi~~~ft~ELrd~g~~GF~L 395 (418)
T KOG2650|consen 327 --EDYEDLQEVARAAADALKSV-YG-------TKYTVGSS-ADTLYPASGGSDDWAYDVLGIPYAFTFELRDTGRYGFLL 395 (418)
T ss_pred --CCHHHHHHHHHHHHHHHHHH-hC-------CEEEeccc-cceeeccCCchHHHhhhccCCCEEEEEEeccCCCCCccC
Confidence 44444555555555432221 12 25666644 568999999999999996664 99999996 34779
Q ss_pred CCCCchHHHHHhHHHHh
Q psy7350 293 PASELPKMWEENRLRFD 309 (315)
Q Consensus 293 ~~~~l~~~w~~n~~~ll 309 (315)
|+.+|.++-++...++.
T Consensus 396 P~~~I~pt~~Et~~~i~ 412 (418)
T KOG2650|consen 396 PASQIIPTAKETWAGIK 412 (418)
T ss_pred ChHHhhhhHHHHHHHHH
Confidence 99999998888876654
No 19
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=100.00 E-value=4.1e-53 Score=392.08 Aligned_cols=237 Identities=20% Similarity=0.254 Sum_probs=198.7
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|+++.. ..||.|+|+|++|||||+|++++++++++|+.+|+.|+.++++|++++|+|||++||||
T Consensus 30 ~S~EGR~i~~l~i~~~~~---~~k~~i~i~~giHarEwi~~~~~~~~i~~Ll~~~~~d~~~~~lL~~~~~~ivP~vNPDG 106 (300)
T cd03872 30 KSYEGRSLYVLKLGKRTR---SYKKAVWIDCGIHAREWIGPAFCQWFVKEALNSYQTDPAMKKMLNQLYFYVMPVFNVDG 106 (300)
T ss_pred ecCCCCceEEEEEecCCC---CCCCeEEEecccccccccCHHHHHHHHHHHHHhccCChHHHHHHhhCeEEEEeeecCCc
Confidence 699999999999997532 47999999999999999999999999999999998899999999999999999999999
Q ss_pred hhhhhcccccCCCCCC-----cCCCcCCCCCCCcccc--------------CCCCCCCHHHHHHHHHHHhc--ceEEEEe
Q psy7350 81 YEVAREGQCEGGQGRY-----NARGFDLNRNFPDYFK--------------QNNKRGQPETDAVKEWTSKI--QFVLSGG 139 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~-----n~~GvDLNRnfp~~~~--------------g~~~~sepEt~al~~~~~~~--~~~~~id 139 (315)
|+++++.+|+|||+|. +|.||||||||+..|. |+.|+|||||+||++|+.+. ++.++||
T Consensus 107 y~ys~~~~r~wrknR~~~~~~~c~GVDLNRNf~~~w~~~g~s~~Pcs~~Y~G~~pfSEpEt~al~~~~~~~~~~i~~~ls 186 (300)
T cd03872 107 YHYSWTNDRFWRKTRSKNSRYQCRGVDANRNWKVKWCDEGASLHPCDDTYCGPFPESEPEVKAVAQFLRKHRKHVRAYLS 186 (300)
T ss_pred ceeeeccchhhhccCCCCCCCCccccccccccCcccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCccceEEEE
Confidence 9999999999999976 5899999999998874 67899999999999999987 5889999
Q ss_pred ecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCC
Q psy7350 140 LHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLT 219 (315)
Q Consensus 140 lH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~ 219 (315)
+|++|++++|||+++... .
T Consensus 187 ~Hsyg~~i~~P~g~~~~~-------------------------------------------------------------~ 205 (300)
T cd03872 187 FHAYAQMLLYPYSYKYAT-------------------------------------------------------------I 205 (300)
T ss_pred EccCCcEEEecCCCcCCC-------------------------------------------------------------C
Confidence 999999999999987432 2
Q ss_pred CCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeecc----CCCCCCC
Q psy7350 220 PDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSC----CKFPPAS 295 (315)
Q Consensus 220 pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~----~~~p~~~ 295 (315)
|+..-++.+|+..+.+..... ...|..|.+ +..+|.++|++.||+|.....++||+||+. +|.||++
T Consensus 206 ~~~~~~~~~~~~~~~ai~~~~--------~~~Y~~g~~-~~~lY~a~G~s~Dw~y~~~i~~s~t~EL~~~g~~gF~lp~~ 276 (300)
T cd03872 206 PNFGCVESAAYNAVNALQSAY--------GVRYRYGPA-SSTLYVSSGSSMDWAYKNGIPYAFAFELRDTGYYGFLLPEG 276 (300)
T ss_pred CChHHHHHHHHHHHHHHHHhh--------CCCCcccCc-ccceecCCCCHHHHhhcCCCcEEEEEEeCCCCCCCCcCCHH
Confidence 344444455544443221100 125666654 357899999999999975445899999963 5779999
Q ss_pred CchHHHHHhHHHHhh
Q psy7350 296 ELPKMWEENRLRFDR 310 (315)
Q Consensus 296 ~l~~~w~~n~~~ll~ 310 (315)
+|.+..+|+.+++..
T Consensus 277 ~I~p~~~E~~~~i~~ 291 (300)
T cd03872 277 LIKPTCTETMLAVKN 291 (300)
T ss_pred HCCcccHHHHHHHHH
Confidence 999999999887754
No 20
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=5e-52 Score=387.17 Aligned_cols=264 Identities=17% Similarity=0.217 Sum_probs=208.7
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcC------------CChHHHHhhcCc
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYN------------TDPYIKWLLDNT 68 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~------------~d~~~~~ll~~~ 68 (315)
+|+|||+|++|+|+.+.. ..||.|+|+|++|||||++++++++++++|+..|. .|+.++++|+ +
T Consensus 8 ~S~EgR~I~~l~I~~~~~---~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~~~~~~~yg~~~~~d~~v~~lL~-~ 83 (332)
T cd06228 8 KTYEGRTPHGAKIGAGTL---TSRYGALFIGGVHARERGSPDNLIYFVSDLLNARKAGRGIKYGGRTYTAADVKAILD-A 83 (332)
T ss_pred CCCCCCeeEEEEEeCCCC---CCCCEEEEEccccccchhhHHHHHHHHHHHHHhhhccccccccccccccHHHHHHHh-C
Confidence 699999999999997542 47999999999999999999999999999999764 4788999999 9
Q ss_pred eEEEEcCCCchhhhhhhcccccCCCCCC--------cCCCcCCCCCCCcccc------------------------CCCC
Q psy7350 69 RIHILPSMNPDGYEVAREGQCEGGQGRY--------NARGFDLNRNFPDYFK------------------------QNNK 116 (315)
Q Consensus 69 ~i~iiP~~NPDG~~~~~~~~~~~~~~R~--------n~~GvDLNRnfp~~~~------------------------g~~~ 116 (315)
+|+|||++|||||+++++.+++|||+|. +|.||||||||+..|. |+.|
T Consensus 84 ~i~IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~~~~~~~~~~~g~S~~Pcse~Y~G~~p 163 (332)
T cd06228 84 GIVVFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQKYFDPGASRSVASTDPASETFHGTAA 163 (332)
T ss_pred eEEEEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCcccccccccccCCCCCCCCccccCCCCC
Confidence 9999999999999999999999999986 6899999999998884 3579
Q ss_pred CCCHHHHHHHHHHHhcc-eEEEEeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCce
Q psy7350 117 RGQPETDAVKEWTSKIQ-FVLSGGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGAL 195 (315)
Q Consensus 117 ~sepEt~al~~~~~~~~-~~~~idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~ 195 (315)
+|||||++|++++.+.+ +.++||+|++|++++|||+++.......+. +|+
T Consensus 164 fSEPET~av~~~~~~~~~~~~yls~HSygq~il~P~g~~~~~~~~~~~-------------~~~---------------- 214 (332)
T cd06228 164 FSEPETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGDDENQSTNPAM-------------NFM---------------- 214 (332)
T ss_pred CccHHHHHHHHHHhccCCeEEEEEeccCCceEEecccCCccccccccc-------------ccc----------------
Confidence 99999999999999986 999999999999999999998542111100 000
Q ss_pred eeeccCCCCCCCc--ccccCCCCCCCCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccch
Q psy7350 196 VASYPFDNTPNSM--FQSYSSAPSLTPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFN 273 (315)
Q Consensus 196 ~~~ypyd~~~~~~--~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~ 273 (315)
+--||.++... ......++..++|.+.+..||+..+.+..... ...|..|.+ ..+|+++|++.||+
T Consensus 215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~ai~~~~--------g~~Y~~g~~--~~lY~~sG~s~D~a 282 (332)
T cd06228 215 --NPAYDGKRGIVAAPDTRYGEYIDSDDWDAAVNLAARMGLAMAAAR--------GRIYTVSQS--VGLYPTSGASDDYA 282 (332)
T ss_pred --ccccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHh--------CCCceeCCc--ccccCCCCChhhhh
Confidence 11122222100 00011233457888999999998877533221 235776754 46999999999999
Q ss_pred hhhc-------ceeEEEEeecc-------CCCCCCCCchHHHHHhHHHHh
Q psy7350 274 YVWY-------GCMEVTLELSC-------CKFPPASELPKMWEENRLRFD 309 (315)
Q Consensus 274 Y~~~-------~~~~~t~El~~-------~~~p~~~~l~~~w~~n~~~ll 309 (315)
|... ..++||+||+. .|+||+++|.++-+|...+|+
T Consensus 283 y~~~~~~~~~~~~~s~t~El~~~~~~~~~gF~~p~~~i~~~~~E~~~g~~ 332 (332)
T cd06228 283 FSRHFADAVKRKVFSYTIEFGETNSEAECPFYPTYSEYNQIIKEVAAGLM 332 (332)
T ss_pred hhccccccccCceEEEEEEeCCCCCCCCcCCCCCHHHHHHHHHHHHHhhC
Confidence 9863 46999999963 688999999999888877664
No 21
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=100.00 E-value=3e-50 Score=374.38 Aligned_cols=235 Identities=27% Similarity=0.364 Sum_probs=204.3
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|++.+ ...||.|+|+|++||+|++|++++++++++|+..+ ++.++++|++++|+|||++||||
T Consensus 29 ~S~egr~i~~l~i~~~~---~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~~L~~~~--~~~~~~ll~~~~i~iiP~~NPDG 103 (294)
T cd03860 29 RSYEGRPIKGVKISNGG---RSNKPAIFIDAGIHAREWISPATALYIINQLVESY--DPEVTDLLDNYDWYILPVANPDG 103 (294)
T ss_pred eCCCCCeEEEEEEecCC---CCCCcEEEEECCcCcCccccHHHHHHHHHHHHHcc--CHHHHHHHHcCeEEEEeeecCCc
Confidence 68999999999999864 25789999999999999999999999999999964 37899999999999999999999
Q ss_pred hhhhhcccccCCCCCCc-----CCCcCCCCCCCcccc--------------CCCCCCCHHHHHHHHHHHhc--ceEEEEe
Q psy7350 81 YEVAREGQCEGGQGRYN-----ARGFDLNRNFPDYFK--------------QNNKRGQPETDAVKEWTSKI--QFVLSGG 139 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n-----~~GvDLNRnfp~~~~--------------g~~~~sepEt~al~~~~~~~--~~~~~id 139 (315)
+++.++.+++|+|+|.+ +.|||||||||..|. |+.+++||||++|++++.++ +++++||
T Consensus 104 ~~~~~~~~~~wrknr~~~~~~~~~GvDLNRnf~~~w~~~~~~~~p~~~~y~G~~~~sepEt~al~~~~~~~~~~~~~~ld 183 (294)
T cd03860 104 YEYTHTTDRLWRKNRSPNSGGGCVGVDLNRNFDYHWGGGGASSDPCSETYAGPSAFSEPETRAVRDFLLSLRGRIKAYLS 183 (294)
T ss_pred hhhhccccchhcccCCCCCCCCceeeccCCCCCCCCccCCCCCCCCCCCccCCCCCchHHHHHHHHHHHhccccEEEEEE
Confidence 99999999999999864 789999999998774 56789999999999999999 7999999
Q ss_pred ecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCC
Q psy7350 140 LHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLT 219 (315)
Q Consensus 140 lH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~ 219 (315)
+|++++.++|||+++. ..+
T Consensus 184 ~Hs~~~~i~~P~~~~~-------------------------------------------------------------~~~ 202 (294)
T cd03860 184 LHSYGQLILYPWGYTS-------------------------------------------------------------ELP 202 (294)
T ss_pred eccCCceEEcCCCCCC-------------------------------------------------------------CCC
Confidence 9999999999997541 146
Q ss_pred CCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcce-eEEEEeecc----CCCCCC
Q psy7350 220 PDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGC-MEVTLELSC----CKFPPA 294 (315)
Q Consensus 220 pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~-~~~t~El~~----~~~p~~ 294 (315)
||.+.++.||+.++.+..... ...|..|.+ ...||+++|+++||+|...|+ ++||+||++ +|.||+
T Consensus 203 ~d~~~~~~la~~~~~~~~~~~--------g~~Y~~g~~-~~~~y~~~G~~~Dw~y~~~~~~~~~t~El~~~~~~gf~~p~ 273 (294)
T cd03860 203 PNYEDLREVAKAAADAIRAVY--------GTRYTVGSS-AETLYPASGGSDDWAYGVAGIPYSYTLELRDTGRYGFLLPA 273 (294)
T ss_pred CCHHHHHHHHHHHHHHHHHhc--------CCCCccccc-cCccccCCCchhhhhhccCCCcEEEEEEecCCCCCCCcCCh
Confidence 899999999999887643221 125666654 357999999999999999875 899999985 578999
Q ss_pred CCchHHHHHhHHHHhh
Q psy7350 295 SELPKMWEENRLRFDR 310 (315)
Q Consensus 295 ~~l~~~w~~n~~~ll~ 310 (315)
++|.++.+++..+++.
T Consensus 274 ~~i~~~~~e~~~~~~~ 289 (294)
T cd03860 274 SQIIPTAEETFAGIKA 289 (294)
T ss_pred HHchhHHHHHHHHHHH
Confidence 9999999999877654
No 22
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=100.00 E-value=1.1e-50 Score=374.79 Aligned_cols=239 Identities=36% Similarity=0.646 Sum_probs=203.9
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++|++........||.|+|+|++||+|++|++++++++++|+.+| .|+.++++|++++|+|||++||||
T Consensus 23 ~S~~Gr~i~~~~i~~~~~~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~~~-~~~~~~~ll~~~~i~iiP~~NPDG 101 (279)
T PF00246_consen 23 KSYEGRPIYALTIGSNSNGSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLSGY-DDPEVKELLDNVVIYIIPMVNPDG 101 (279)
T ss_dssp E-TTS-EEEEEEESSSTTTTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHHHT-TSHHHHHHHHHEEEEEES-SSHHH
T ss_pred ECCCCCeEEEEEeecccccccccccceEEEecccccccCchHHHHHHHHHhhccc-cchhhhhhcccceEEEEeeecccc
Confidence 5899999999999986444456899999999999999999999999999999987 899999999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccc--------------cCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcce
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYF--------------KQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALV 146 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~--------------~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~ 146 (315)
+++.+..++.|+++|.|..|||||||||..| .|+.+++||||+++++++++.++++++|+|+++..
T Consensus 102 ~~~~~~~~~~w~~~R~n~~GvDlNRnf~~~w~~~~~~~~~~~~~y~g~~~~sepEt~al~~~~~~~~~~~~id~H~~~~~ 181 (279)
T PF00246_consen 102 YEYGTSGDRGWRKNRSNANGVDLNRNFPYQWNEEGSSSNPCSETYRGPAPFSEPETRALRNLIQDWNPDFFIDFHSGGNA 181 (279)
T ss_dssp HHHHHHT-TTCCSTSSBTTS--GGGSSSSSTTSSSSBSSTTSTTB--SSTTTSHHHHHHHHHHHHTTEEEEEEEEESSSE
T ss_pred eeeeeecccccccccccccccccccccCcccccccccCCCCCcccCCCcchhhhHHHHHHHHHhhcceeEEEeccccccc
Confidence 9999999999999999999999999999987 35678899999999999999999999999999999
Q ss_pred eeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHH
Q psy7350 147 ASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFK 226 (315)
Q Consensus 147 ~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~ 226 (315)
++|||+++.. .+++|.+.++
T Consensus 182 ~~~p~~~~~~------------------------------------------------------------~~~~~~~~~~ 201 (279)
T PF00246_consen 182 ILYPYGYSYD------------------------------------------------------------EPPPDADELR 201 (279)
T ss_dssp EEESESSSST------------------------------------------------------------SSTTTHHHHH
T ss_pred eeeecccccc------------------------------------------------------------cCCchhhhhh
Confidence 8899886531 1468888999
Q ss_pred HHHHHHhhhCccccCCCCCCCCCCCC-CCCccccceEEeCCCCcccchhhhcce-eEEEEeeccCC--CCCCCCchHHHH
Q psy7350 227 HLALTYSRNHPTMATGLACKSNTPAF-KQGITNGAQWYPLTGGMQDFNYVWYGC-MEVTLELSCCK--FPPASELPKMWE 302 (315)
Q Consensus 227 ~la~~~a~~~~~m~~g~~~~~~~~~~-~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~-~~~t~El~~~~--~p~~~~l~~~w~ 302 (315)
.||+.++.+.+.|..|. .| ..|+.++..||+++|++.||+|...|+ ++||+|++|+. +||+++|.++|+
T Consensus 202 ~la~~~~~~~~~~~~~~-------~y~~~~~~~~~~~~~~~G~~~D~~~~~~g~~~~~t~E~~~~~~f~p~~~~i~~~~~ 274 (279)
T PF00246_consen 202 SLARAFAEALGSMSRGQ-------NYDSYGITNGDNWYPASGSSDDYAYYHHGIPFSFTLELGCCGNFYPPASEIEPIWE 274 (279)
T ss_dssp HHHHHHHHHHHCHTTTT-------TBSEEEEEHHHHTTTTSSSHHHHHHHHTTSSEEEEEEESSSSSTSS-GGGHHHHHH
T ss_pred HHHHHHHHHhhhccccc-------cccccCCcccccccccccccceeehhhcCCcEEEEEEeCCCCCccCCHHHHHHHHH
Confidence 99999999877665432 24 556667777999999999999999999 99999999987 899999999999
Q ss_pred HhHHH
Q psy7350 303 ENRLR 307 (315)
Q Consensus 303 ~n~~~ 307 (315)
+|+++
T Consensus 275 ~~~~~ 279 (279)
T PF00246_consen 275 ENWEA 279 (279)
T ss_dssp HHHH-
T ss_pred HHhhC
Confidence 99875
No 23
>smart00631 Zn_pept Zn_pept.
Probab=100.00 E-value=3.9e-48 Score=357.53 Aligned_cols=226 Identities=37% Similarity=0.555 Sum_probs=193.5
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++|++++. ..||.|+|+|++||+|++|++++++++++|+.+++.|+.++.+|++++|+|||++||||
T Consensus 29 ~S~~Gr~i~~~~i~~~~~---~~k~~v~i~a~~Hg~E~~g~~~~~~~i~~L~~~~~~~~~~~~ll~~~~i~ivP~~NPDG 105 (277)
T smart00631 29 KSVEGRPIWVLKISDGGS---HNKPAIFIDAGIHAREWIGPATALYLINQLLENYGRDPRITKLLDKTDIYIVPVLNPDG 105 (277)
T ss_pred ecCCCCceEEEEEeCCCC---CCCcEEEEECCccccccccHHHHHHHHHHHHHhcccCHHHHHHHHcCcEEEEEeecCch
Confidence 589999999999998642 46899999999999999999999999999999988899999999999999999999999
Q ss_pred hhhhhcccccCCCCCC---cCCCcCCCCCCCccc-----------cCCCCCCCHHHHHHHHHHHhc-ceEEEEeecCCcc
Q psy7350 81 YEVAREGQCEGGQGRY---NARGFDLNRNFPDYF-----------KQNNKRGQPETDAVKEWTSKI-QFVLSGGLHGGAL 145 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~---n~~GvDLNRnfp~~~-----------~g~~~~sepEt~al~~~~~~~-~~~~~idlH~~~~ 145 (315)
+++.++.++.|+++|. ++.|||||||||..| .|+.+++||||++|++++.++ ++++++|+|++++
T Consensus 106 ~~~~~~~~~~wr~~r~~~~~~~GvDLNRnf~~~w~~~~~p~~~~y~G~~~~sepEt~ai~~~~~~~~~~~~~id~Hs~~~ 185 (277)
T smart00631 106 YEYTHTGDRLWRKNRSPNSNCRGVDLNRNFPFHWGKTGNPCSETYAGPSPFSEPETKAVRDFIRSNRRFVLYIDLHSYSQ 185 (277)
T ss_pred hhheecccccccCCCCCCCCCcCcccCCCCCCCCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhcCCeeEEEEeccCCc
Confidence 9999999999999998 899999999999865 467789999999999999999 8999999999999
Q ss_pred eeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHH
Q psy7350 146 VASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVF 225 (315)
Q Consensus 146 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~ 225 (315)
.++|||+++.... ++ ...++++++
T Consensus 186 ~i~~p~~~~~~~~-----------~~---------------------------------------------~~~~~~~~~ 209 (277)
T smart00631 186 LILYPYGYTKNDL-----------PP---------------------------------------------NVDDLDAVA 209 (277)
T ss_pred EEEecCcCCCCCC-----------CC---------------------------------------------CHHHHHHHH
Confidence 9999998763210 00 012446788
Q ss_pred HHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcc-eeEEEEeeccCC----CCCCCCch
Q psy7350 226 KHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYG-CMEVTLELSCCK----FPPASELP 298 (315)
Q Consensus 226 ~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~-~~~~t~El~~~~----~p~~~~l~ 298 (315)
+.||+.++..++. .|..|.+.++ +|++.|+++||+|.+.| +++||+||++++ .+|.+++.
T Consensus 210 ~~~~~~~~~~~g~------------~y~~g~~~~~-~y~~~G~~~D~~~~~~gi~~~~t~El~~~~~~~~~~p~~~~~ 274 (277)
T smart00631 210 KALAKALASVHGT------------RYTYGISNGA-IYPASGGSDDWAYGTLGIPFSFTLELRDDGRYGFLLPPSQII 274 (277)
T ss_pred HHHHHHHHHhcCC------------ccccccccCc-ccCCCCchhhhhhccCCCcEEEEEEecCCCCCCccCCHHHcc
Confidence 9999998876532 4666777654 78899999999999999 699999999864 45555543
No 24
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=100.00 E-value=5.9e-48 Score=352.14 Aligned_cols=215 Identities=24% Similarity=0.364 Sum_probs=178.2
Q ss_pred CCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCC-----ChHHHHhhcCceEEEEcCC
Q psy7350 2 ACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNT-----DPYIKWLLDNTRIHILPSM 76 (315)
Q Consensus 2 S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~-----d~~~~~ll~~~~i~iiP~~ 76 (315)
|+|||+|++++||++ +|.|+|+|++|||||+|++++++++++|+..|.. +..++++|++++|+|||++
T Consensus 1 S~eGR~I~~~~ig~~-------~~~v~i~agiHarE~~~~~~~l~~i~~L~~~~~~~~~~~~~~~~~lL~~~~i~ivP~~ 73 (255)
T cd06229 1 SVLGRDIYEVKLGNG-------PKTVFYNASFHAREWITTLLLMKFIEEYARAYENNEKLGGYDLRELLENVTICFVPMV 73 (255)
T ss_pred CCCCceeeEEEEcCC-------CceEEEECCccccchhhHHHHHHHHHHHHHHhccCccccchhHHHHHhcCeEEEEeCc
Confidence 899999999999963 3899999999999999999999999999998754 3467999999999999999
Q ss_pred Cchhhhhhhccc----------ccCCCC-------CCcCCCcCCCCCCCcccc---------------CCCCCCCHHHHH
Q psy7350 77 NPDGYEVAREGQ----------CEGGQG-------RYNARGFDLNRNFPDYFK---------------QNNKRGQPETDA 124 (315)
Q Consensus 77 NPDG~~~~~~~~----------~~~~~~-------R~n~~GvDLNRnfp~~~~---------------g~~~~sepEt~a 124 (315)
||||+++++++. +.|+++ |.||.|||||||||..|. |+.|+|||||+|
T Consensus 74 NPDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~s~~p~~~~y~G~~p~SEpEtra 153 (255)
T cd06229 74 NPDGVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEKAGPKAPAPRNYKGEQPLSEPETIA 153 (255)
T ss_pred cCCchheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCCCCCCCCCccCcCCCCCCCchhHHH
Confidence 999999987653 244443 568999999999998884 357899999999
Q ss_pred HHHHHHhcceEEEEeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCC
Q psy7350 125 VKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 204 (315)
Q Consensus 125 l~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~ 204 (315)
|++++.+.+++++||+|+++++++|||+...
T Consensus 154 l~~~~~~~~~~~~i~~Hs~g~~i~~~~~~~~------------------------------------------------- 184 (255)
T cd06229 154 LAELTRENRFRAVLAYHSQGEEIYWGYGGLE------------------------------------------------- 184 (255)
T ss_pred HHHHHHhCCCeEEEEecCCCCeEEecCCCCC-------------------------------------------------
Confidence 9999999999999999999999999986321
Q ss_pred CCCcccccCCCCCCCCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEE
Q psy7350 205 PNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTL 284 (315)
Q Consensus 205 ~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~ 284 (315)
| ...+.||+.++..+ +|..|... . |+++|+++||+|...|+.+||+
T Consensus 185 ---------------~--~~~~~~~~~~~~~~--------------gy~~~~~~--~-~~~~G~~~Dw~~~~~gi~s~t~ 230 (255)
T cd06229 185 ---------------P--PESQKMAELLAEVS--------------GYELVDSE--S-KRSYGGYKDWFIQKFRRPGFTI 230 (255)
T ss_pred ---------------c--hHHHHHHHHHhhcc--------------CCcccccc--c-cCCCCCHHHHHHhhcCCeEEEE
Confidence 1 22234555554422 24434332 2 9999999999999999999999
Q ss_pred eeccCCC-CCCCCchHHHHHhHH
Q psy7350 285 ELSCCKF-PPASELPKMWEENRL 306 (315)
Q Consensus 285 El~~~~~-p~~~~l~~~w~~n~~ 306 (315)
||+..+- +|.+|+..+|++|+.
T Consensus 231 El~~~~~~~~~~~~~~~~~~~~~ 253 (255)
T cd06229 231 EIGRGTNPLPLSQFKTIYKENKG 253 (255)
T ss_pred EeCCCCCCCChHHhHHHHHhhcC
Confidence 9997654 588999999999984
No 25
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=1.5e-47 Score=362.36 Aligned_cols=231 Identities=26% Similarity=0.342 Sum_probs=190.5
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|++........||.|+|.|++|||||+|++++++++++|+.+|++|+.++++|++++|+|||++||||
T Consensus 32 ~S~EGR~I~~l~Is~~~~~~~~~Kp~I~i~~giHarEwig~~~~l~li~~Ll~~y~~d~~i~~lLd~~~~~IvP~vNPDG 111 (360)
T cd06905 32 KSYEGRDIWLLTLTNQATGPDREKPAFWIDANIHATEVTGSAVALYVIQTLLNGYGSDPEVTRLLDGYTFYILPRLNPDG 111 (360)
T ss_pred ecCCCCceEEEEecCCCCCCCCCCcEEEEecCCCCCchHHHHHHHHHHHHHHHhccCCHHHHHHHhcCeEEEEeeeCCCh
Confidence 69999999999999754333457999999999999999999999999999999988899999999999999999999999
Q ss_pred hhhhhc-ccccCCCCCCc--------------------------------------------------------------
Q psy7350 81 YEVARE-GQCEGGQGRYN-------------------------------------------------------------- 97 (315)
Q Consensus 81 ~~~~~~-~~~~~~~~R~n-------------------------------------------------------------- 97 (315)
++++++ .++.|||+|..
T Consensus 112 ~e~~~~~~~r~wRk~r~~~~~~~~~~g~~~~D~n~D~~~~~mr~~d~~g~w~~~~~~p~~m~~~~~~~~~g~~y~~~~eg 191 (360)
T cd06905 112 AEQALTHPPYVRRSSRRPYPYPDRIDGLYPEDIDGDGLILQMRVKDPCGAWKVSERDPRIMVRREPDEFGGTYYRLLPEG 191 (360)
T ss_pred heEEeeccccccccCCCCcccccccccccccccCccchhheeeccccccccccccccchhhccccccccCceeeeecccc
Confidence 999998 88889887742
Q ss_pred ---------------CCCcCCCCCCCcccc--------CCCCCCCHHHHHHHHHHHhc-ceEEEEeecCCcceeeecCCC
Q psy7350 98 ---------------ARGFDLNRNFPDYFK--------QNNKRGQPETDAVKEWTSKI-QFVLSGGLHGGALVASYPFDN 153 (315)
Q Consensus 98 ---------------~~GvDLNRnfp~~~~--------g~~~~sepEt~al~~~~~~~-~~~~~idlH~~~~~~~~P~~~ 153 (315)
+.|||||||||..|. |+.|+|||||+||++|+.+. ++.++|++|++|++++|||++
T Consensus 192 ~~~~~dg~~~~~~~~~~GvDlNRNf~~~W~~~~~~~y~G~~p~SEpEt~av~~~~~~~~~i~~~is~Hsyg~~il~P~g~ 271 (360)
T cd06905 192 LIRNYDGYNIKIAPPLEGLDFNRNFPHDWRPEGEQYGAGPFPFSEPETRAVVEFWTDHPNINGFISYHTYSGVILRPYSD 271 (360)
T ss_pred cccccccccccccccccCCCcccCcCCCCCCCCCcCCCCCCCCChHHHHHHHHHHhcCCCeEEEEEecCCcCeeeeCCCC
Confidence 159999999999983 67899999999999999987 589999999999999999998
Q ss_pred CCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHh
Q psy7350 154 TPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYS 233 (315)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a 233 (315)
+.+. ....+|.+.++.||+..+
T Consensus 272 ~~~~----------------------------------------------------------~~~~~~~~~~~~la~~~~ 293 (360)
T cd06905 272 KPDD----------------------------------------------------------QMPVDDLELYKALGEKGE 293 (360)
T ss_pred CcCc----------------------------------------------------------CCChhhHHHHHHHHHHHH
Confidence 7431 012466778888998776
Q ss_pred hhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeecc----CCCCCCCCchH
Q psy7350 234 RNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSC----CKFPPASELPK 299 (315)
Q Consensus 234 ~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~----~~~p~~~~l~~ 299 (315)
+. .|+++.+....|..|.+ ++++|++.||+|...|+++||+||.. .+++++..+..
T Consensus 294 ~~-----~~y~~~~~~~~~~~~~~-----~~~~G~~~Dw~y~~~gi~s~t~EL~~~~~~~~~~~~~~~~~ 353 (360)
T cd06905 294 EL-----TGYPTVSVYHEFRYHPK-----EVTYGAFDDWAYDHLGIFAFTVELWDLPTEAGVKKYDFIQW 353 (360)
T ss_pred Hh-----cCccccccccceecCCc-----ccccCChhhhhhhcCCeEEEEEEcCCCCcccCCChHHhhhh
Confidence 42 24433333334544432 38999999999999999999999963 35566665443
No 26
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=5.1e-47 Score=347.36 Aligned_cols=211 Identities=21% Similarity=0.281 Sum_probs=175.4
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCC----ChHHHHhhcCceEEEEcCC
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNT----DPYIKWLLDNTRIHILPSM 76 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~----d~~~~~ll~~~~i~iiP~~ 76 (315)
+|+|||+|++|+|+...+.. ..||.|+|+||+|||||+|++++++|+++|+.++.. ++.++++|++++|+|||++
T Consensus 30 ~S~egr~i~~i~~~~~~~~~-~~k~~i~i~agiHarE~i~~~~~l~li~~L~~~~~~~~~~~~~~~~lL~~~~i~ivP~~ 108 (272)
T cd06227 30 ESVKVRNFSSITLNPNGDPS-KKKVKALLLFGEHARELISPETGLHLLSNLCGELAETFDWGDLLKNILDNFDLKIIPNE 108 (272)
T ss_pred eccCCceeeEEEecCCCCCC-CCCCEEEEECCccCCchhhHHHHHHHHHHHHHhcccccchhHHHHHHHhcCcEEEEecc
Confidence 58999999999999754321 369999999999999999999999999999998753 3789999999999999999
Q ss_pred CchhhhhhhcccccCCCCCCcCCCcCCCCCCCcccc------------CCCCCCCHHHHHHHHHHHhcceEEEEeecCCc
Q psy7350 77 NPDGYEVAREGQCEGGQGRYNARGFDLNRNFPDYFK------------QNNKRGQPETDAVKEWTSKIQFVLSGGLHGGA 144 (315)
Q Consensus 77 NPDG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~------------g~~~~sepEt~al~~~~~~~~~~~~idlH~~~ 144 (315)
||||+++.+++++.||++| +|||||||||..|. |+.|+|||||++|++|+.+++|+++||+|+++
T Consensus 109 NPDG~~~~~~~~~~wR~N~---~GVDLNRNf~~~w~~~~~~~~~~~y~G~~~~sEpEt~av~~~~~~~~~~~~i~~Hs~~ 185 (272)
T cd06227 109 NPDGRKKVESGNYCLRENE---NGVDLNRNYGADWGFKEDDYEDEEYSGPAPFSEPETRVLRDLLTSFSPDVFLSVHSGT 185 (272)
T ss_pred CCchheeEeccCcccccCC---ccccccccCCcccccCCCCccccccCCCCCCCcHHHHHHHHHHHhCCCeEEEEeccCC
Confidence 9999999998888876655 79999999998874 45789999999999999999999999999999
Q ss_pred ceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHH
Q psy7350 145 LVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDV 224 (315)
Q Consensus 145 ~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~ 224 (315)
++++|||+++... +.|+...
T Consensus 186 ~~i~~P~~~~~~~------------------------------------------------------------~~~~~~~ 205 (272)
T cd06227 186 LALFTPYAYKKEQ------------------------------------------------------------PEPNLAE 205 (272)
T ss_pred CEEEecCCCCCCC------------------------------------------------------------CCCCHHH
Confidence 9999999987431 1244444
Q ss_pred HHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcce-eEEEEeec
Q psy7350 225 FKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGC-MEVTLELS 287 (315)
Q Consensus 225 ~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~-~~~t~El~ 287 (315)
...++...+..+. ..|..|.+.....|+++|++.||+|...|+ ++||+||+
T Consensus 206 ~~~~~~~~~~~~~------------~~y~~G~~~~~~~Y~a~G~s~Dway~~~gip~s~t~EL~ 257 (272)
T cd06227 206 DMRILLLISNKHC------------PRCQVGSAGKLVGYLAHGTSMDYMYDVLKVPYSFTFEIY 257 (272)
T ss_pred HHHHHHHHHHHhC------------CCCceecCccceeecCCCCHHHHHhhcCCCcEEEEEEcc
Confidence 4555555444221 256666654434599999999999998887 79999997
No 27
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=2.5e-39 Score=296.28 Aligned_cols=198 Identities=22% Similarity=0.357 Sum_probs=161.0
Q ss_pred CceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhh
Q psy7350 5 RRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVA 84 (315)
Q Consensus 5 GR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~ 84 (315)
..+|++++|++.. ..+|.|+|+||+||+||+|++++++++++|+..|+.|+.+++++++++|+|||++||||+
T Consensus 9 ~~pi~~v~ig~~~----~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~~~~~d~~~~~ll~~~~i~ivP~vNPdG~--- 81 (273)
T cd03862 9 RFPIYALELGSPD----PKAPVLGLVGGVHGLERIGTQVLLAFLESLLERLRWDKLLQELLEKVRLVFLPLVNPVGM--- 81 (273)
T ss_pred cceeEEEEecCCC----CCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHHhccccHHHHHHHhCCeEEEEeccCcCHH---
Confidence 5789999998743 468999999999999999999999999999999888999999999999999999999997
Q ss_pred hcccccCCCCCCcCCCcCCCCCCCcccc--------------------CCC-CCCCHHHHHHHHHHHhc----ceEEEEe
Q psy7350 85 REGQCEGGQGRYNARGFDLNRNFPDYFK--------------------QNN-KRGQPETDAVKEWTSKI----QFVLSGG 139 (315)
Q Consensus 85 ~~~~~~~~~~R~n~~GvDLNRnfp~~~~--------------------g~~-~~sepEt~al~~~~~~~----~~~~~id 139 (315)
|+++|.|++|||||||||..|. |+. +++||||++|++++.+. +++++||
T Consensus 82 ------~~~~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpEt~al~~~~~~~~~~~~~~~~ld 155 (273)
T cd03862 82 ------ALKTRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQALCRFVRELLFESPFSIALD 155 (273)
T ss_pred ------HhcccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCeEEEEE
Confidence 4458999999999999997753 232 79999999999999985 7999999
Q ss_pred ecCC---cceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCC
Q psy7350 140 LHGG---ALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAP 216 (315)
Q Consensus 140 lH~~---~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~ 216 (315)
+|++ ++.++|||+++..+
T Consensus 156 ~HSg~G~~~~i~~Pyg~~~~~----------------------------------------------------------- 176 (273)
T cd03862 156 CHSGFGLVDRIWFPYAYTKEP----------------------------------------------------------- 176 (273)
T ss_pred ECCCCCccCEEEcCCcCCCCC-----------------------------------------------------------
Confidence 9995 37899999987421
Q ss_pred CCCCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcce-------eEEEEeeccC
Q psy7350 217 SLTPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGC-------MEVTLELSCC 289 (315)
Q Consensus 217 ~~~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~-------~~~t~El~~~ 289 (315)
.|+.+-+..|++.+..+++. ..|..|. .+..|.++|++.||+|...+. +.||+|+|+-
T Consensus 177 --~~~~~~~~~l~~~~~~~~~~-----------~~Y~~g~--~s~~Y~a~G~~~D~~y~~~~~~~~~~~~l~~TlE~Gt~ 241 (273)
T cd03862 177 --IPHLAEIYALKELLERTYPN-----------HVYRFEP--QSRHYLTHGDLWDYLYDQHQKQQPNGRFLPLTLEMGSW 241 (273)
T ss_pred --CCCHHHHHHHHHHHHHhCCC-----------CceEECC--cceeEECCCCHHHHHHhhcCcccccccceeEEEEeecc
Confidence 23444455566655443211 1344442 335799999999999987654 7999999986
No 28
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=100.00 E-value=5.4e-39 Score=290.22 Aligned_cols=131 Identities=24% Similarity=0.376 Sum_probs=117.6
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|++. ..||.|+|+|++||+|++|+.+++.|+++|++ +++.++++|++++|+|||++||||
T Consensus 33 ~S~eGR~i~~l~ig~~-----~~k~~v~i~~~iH~~E~~g~~~~~~~~~~l~~---~~~~~~~ll~~~~i~ivP~~NPDG 104 (244)
T cd06237 33 LSTQGRPLKALERGNP-----DSKEWIVVISRQHPPEVTGALAMKAFIETLLS---DSELAKKFRAKYNVLLVPNMNPDG 104 (244)
T ss_pred EcCCCCEEEEEEecCC-----CCCceEEEEcCcCCCcHHHHHHHHHHHHHHHh---CCHHHHHHHHhCEEEEEEeeCcch
Confidence 5999999999999864 36899999999999999999999999999997 456679999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc-----ceEEEEeecCCcceeeecCCCC
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI-----QFVLSGGLHGGALVASYPFDNT 154 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~-----~~~~~idlH~~~~~~~~P~~~~ 154 (315)
+++. . +|.|.+||||||||+ ++++|||+++++++.+. +++++||+|++++.++|||++.
T Consensus 105 ~~~~-----~---wR~N~~GvDLNRnw~-------~~sepEt~a~~~~~~~~~~~~~~~~~~id~Hs~~~~i~~~~~~~ 168 (244)
T cd06237 105 VDLG-----H---WRHNANGIDLNRDWS-------NFNQPETRAIRDYLVRLVKEGGKIVFALDFHSTWHDVFYTMPED 168 (244)
T ss_pred hhcC-----C---ccCCCCCcCCCCCCC-------CCCCHHHHHHHHHHHHHhccCCCEEEEEEeccCCcceEecCCCC
Confidence 9974 2 467889999999994 68999999999999864 7999999999999999998753
No 29
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=100.00 E-value=1.2e-36 Score=267.04 Aligned_cols=196 Identities=38% Similarity=0.645 Sum_probs=166.9
Q ss_pred EEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCCC
Q psy7350 27 VKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNRN 106 (315)
Q Consensus 27 v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRn 106 (315)
|+|+|++||+|++|++++++++++|+..+... +.++++.+|+|||++||||+++. .+|.+..|+|||||
T Consensus 1 v~i~ag~Hg~E~~g~~~~~~~~~~l~~~~~~~---~~l~~~~~i~iiP~~NPdG~~~~--------~~R~n~~g~DlNR~ 69 (196)
T cd00596 1 VLIIAGIHGNETIGVEAALALLRRLLSNYGRD---TKLLENGRLLVVPVLNPDGYEAV--------NWRKNANGVDLNRN 69 (196)
T ss_pred CEEECCcCCCcHHHHHHHHHHHHHHHHcCcch---HHHHhCCeEEEEeCcccccceee--------eEEeCCCCcCccCC
Confidence 68999999999999999999999999864332 78999999999999999999883 16778889999999
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhcccee
Q psy7350 107 FPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVL 186 (315)
Q Consensus 107 fp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~l 186 (315)
||..|.. .++++||++++.+++.+.++++++|+|+++..++|||++...
T Consensus 70 f~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~~~~~------------------------------ 118 (196)
T cd00596 70 FPGLWGK-GPLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYSHSDT------------------------------ 118 (196)
T ss_pred CCCcccC-CCCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCCCCCC------------------------------
Confidence 9987754 578999999999999999999999999999888888876531
Q ss_pred ecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCC
Q psy7350 187 SGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLT 266 (315)
Q Consensus 187 s~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~ 266 (315)
..||...++.+|+.++..+.. ...+......||++.
T Consensus 119 -------------------------------~~~~~~~~~~~a~~~~~~~~~-------------~~~~~~~~~~~~~~~ 154 (196)
T cd00596 119 -------------------------------PPPDAEIPKALAQLLADAARG-------------SKYGVGFGAKWYETG 154 (196)
T ss_pred -------------------------------CCCCHHHHHHHHHHHHHhccC-------------CCCceeecceEEEcC
Confidence 237788899999999876430 111233345679999
Q ss_pred CCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhHHHH
Q psy7350 267 GGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENRLRF 308 (315)
Q Consensus 267 G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~~~l 308 (315)
|++.||+|...++++||+|+++++.|+.+++..+|++|+.+|
T Consensus 155 g~~~d~~~~~~~~~~~tiE~g~~~~~~~~~~~~~~~~~~~~~ 196 (196)
T cd00596 155 GGFDDWAYGNHGCPSFTIELGGQGYPPEEELPSRGEENKEAL 196 (196)
T ss_pred CchhhhhhhCCCcEEEEEEeCCCCCCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999998754
No 30
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=100.00 E-value=2.2e-36 Score=275.36 Aligned_cols=133 Identities=25% Similarity=0.384 Sum_probs=120.9
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++|+|++.. .+||.|+|+|++||+|++|..++..|++.|+.. .|+.++++|++++|+|||++||||
T Consensus 36 ~S~eGR~i~~l~I~~~~----~~k~~V~i~a~iH~~E~~g~~~~~~ll~~L~~~--~d~~~~~ll~~~~~~IvP~~NPDG 109 (263)
T cd06234 36 QTVQGRDIDLLTFGEPG----PGKKKLWIIARQHPGETMAEWFMEGLLERLLDP--DDAVARALLEKAVFYVVPNMNPDG 109 (263)
T ss_pred EcCCCCeEEEEEEccCC----CCCCEEEEECCCCCCcHHHHHHHHHHHHHHhhc--CCHHHHHHHhcCEEEEEeeecchh
Confidence 59999999999998732 478999999999999999999999999999985 588999999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCC
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 154 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~ 154 (315)
+++.. .|.||.|+||||||+ ++.++++||+++|+++|.+.++++++|+|+++++ ||.+.
T Consensus 110 ~~~g~--------~R~n~~GvDLNRnw~----~p~~~s~PEt~av~~~~~~~~~~~~ld~Hs~~~~---py~f~ 168 (263)
T cd06234 110 SARGH--------LRTNAAGANLNREWA----EPSAERSPEVFAVRQRMEETGVDFFLDVHGDEAL---PYNFI 168 (263)
T ss_pred hhhcC--------CccCCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCC---CccEe
Confidence 98753 588999999999985 4678999999999999999999999999999986 76654
No 31
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=100.00 E-value=3e-35 Score=269.57 Aligned_cols=131 Identities=21% Similarity=0.288 Sum_probs=116.4
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++++.. .+||.|+|+|++||+||+|+++++.++++|+. .++.++.+|++++|+|||++||||
T Consensus 35 ~s~egr~i~~~~~~~~-----~~k~~i~i~a~iH~~E~~~~~~~~~li~~Ll~---~~~~~~~ll~~~~~~ivP~~NPDG 106 (269)
T cd03856 35 SPPEGNDIKYEHLCSF-----ANKKYIFLIARVHPGETNASWVMKGFLEFLLS---DNPTAQSLRESFVFKIVPMLNPDG 106 (269)
T ss_pred cCCCCccccceeccCC-----CCCcEEEEEcCcCCCchHHHHHHHHHHHHHHh---CCHHHHHHHhcCeEEEEeeeCCcc
Confidence 5899999999988753 47999999999999999999999999999997 356689999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc-----ceEEEEeecCCc---ceeeecC
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI-----QFVLSGGLHGGA---LVASYPF 151 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~-----~~~~~idlH~~~---~~~~~P~ 151 (315)
+++. .+|.|+.|+||||||+ ++.++++||++++++++.+. ++++++|+|+++ ++++|.+
T Consensus 107 ~~~g--------~~R~n~~G~DLNR~~~----~p~~~~~pE~~~~~~~~~~~~~~~~~~~~~idlH~~~~~~~~f~yG~ 173 (269)
T cd03856 107 VIRG--------NYRCSLSGVDLNRQWQ----NPSPDLHPEIYLVKGLMLYLAAGKRGVLFYCDFHGHSRKKNVFMYGC 173 (269)
T ss_pred cccc--------CCcCCCCCCCcCCCCC----CCCCCCCCCHHHHHHHHHHHHhccCCceEEEEecCCCccCceEeecC
Confidence 9864 2688999999999985 57889999999999999987 899999999999 5566433
No 32
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=100.00 E-value=3.5e-34 Score=260.44 Aligned_cols=141 Identities=23% Similarity=0.348 Sum_probs=126.3
Q ss_pred CCCCCceEEEEEEeCCCC-CCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCch
Q psy7350 1 MACTRRDLWVMVVSASPY-EHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPD 79 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~-~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPD 79 (315)
+|+|||+|++|+|+++++ ....+||.|+|+|++||+||+|+.+++++++.|+. +|+.++.++++++|+||||+|||
T Consensus 19 ~S~eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~---~~~~~~~L~~~~~~~IvP~~NPD 95 (261)
T cd06908 19 QSVQKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVS---NHPIAKVLREHLVFKIVPMLNPD 95 (261)
T ss_pred EcCCCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhh---CCHHHHHHHHhCcEEEEeeecCc
Confidence 599999999999997542 12347999999999999999999999999999998 48999999999999999999999
Q ss_pred hhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc------ceEEEEeecCCccee-eecCC
Q psy7350 80 GYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI------QFVLSGGLHGGALVA-SYPFD 152 (315)
Q Consensus 80 G~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~------~~~~~idlH~~~~~~-~~P~~ 152 (315)
|+++. ..|.+|.|+||||||+ ++.++++||++++++++.+. ++++++|+|++++.. +|||+
T Consensus 96 Gv~~g--------n~R~~~~G~DLNR~w~----~p~~~~~PEv~av~~~i~~~~~~~~~~i~~~lD~H~hs~~~~~F~yG 163 (261)
T cd06908 96 GVFLG--------NYRCSLMGHDLNRHWH----DPSPWAHPTLHAVKNLLKELDNDSTTQLDFYIDLHAHSSLMNCFIYG 163 (261)
T ss_pred ceeec--------CCcCcCcCcCCCCCCC----CCCcccChHHHHHHHHHHHhhhccccCeeEEEEeeccccccceeecc
Confidence 99876 3689999999999985 57889999999999999874 799999999999987 89999
Q ss_pred CCCC
Q psy7350 153 NTPN 156 (315)
Q Consensus 153 ~~~~ 156 (315)
++.+
T Consensus 164 ~~~~ 167 (261)
T cd06908 164 NTYD 167 (261)
T ss_pred ccCC
Confidence 8743
No 33
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=100.00 E-value=3.7e-33 Score=255.40 Aligned_cols=141 Identities=24% Similarity=0.190 Sum_probs=120.3
Q ss_pred CCCCCceEEEEEEeCCCCC----------------------CCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCC
Q psy7350 1 MACTRRDLWVMVVSASPYE----------------------HMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTD 58 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~----------------------~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d 58 (315)
+|+|||+|.++.|++..+. ....+|.|+|.++|||+||+|++++++++++|+.. .+
T Consensus 3 ~s~egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~~--~~ 80 (271)
T cd06238 3 RTHEGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAAA--QG 80 (271)
T ss_pred cCCCCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHHc--CC
Confidence 6999999999999975321 12368899999999999999999999999999985 68
Q ss_pred hHHHHhhcCceEEEEcCCCchhhhh-hh----------ccccc-------CCCCCCcCCCcCCCCCCCccccCCCCCCCH
Q psy7350 59 PYIKWLLDNTRIHILPSMNPDGYEV-AR----------EGQCE-------GGQGRYNARGFDLNRNFPDYFKQNNKRGQP 120 (315)
Q Consensus 59 ~~~~~ll~~~~i~iiP~~NPDG~~~-~~----------~~~~~-------~~~~R~n~~GvDLNRnfp~~~~g~~~~sep 120 (315)
+.++++|++++|+|+|++||||++. .. +.++. |..+|.||.|+||||||. ++++|
T Consensus 81 ~~~~~ll~~~~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~DLNRD~~-------~~s~p 153 (271)
T cd06238 81 DEIEALLDNAVVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFDLNRDWL-------PLTQP 153 (271)
T ss_pred HHHHHHHhcCEEEEEeccCCCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCcccccccc-------cccCH
Confidence 8899999999999999999999995 32 23343 445688999999999994 68999
Q ss_pred HHHHHHHHHHhcceEEEEeecCCcc---eeeec
Q psy7350 121 ETDAVKEWTSKIQFVLSGGLHGGAL---VASYP 150 (315)
Q Consensus 121 Et~al~~~~~~~~~~~~idlH~~~~---~~~~P 150 (315)
||+++++++.++++++++|+|+++. .+++|
T Consensus 154 Etra~~~~~~~~~p~~~~D~H~~g~~~~~~~~P 186 (271)
T cd06238 154 ESRGRLAAYHEWRPNVVVDFHEMGTNSTYFFAP 186 (271)
T ss_pred HHHHHHHHHHhcCCeEEEEeccCCCccceEEeC
Confidence 9999999999999999999999884 44445
No 34
>PRK10602 murein peptide amidase A; Provisional
Probab=100.00 E-value=1.6e-33 Score=252.54 Aligned_cols=187 Identities=21% Similarity=0.269 Sum_probs=147.7
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++++.+ +|+.++|+|++||+|++|+++++++++.|+.. ...++|||++||||
T Consensus 22 ~S~egrpi~~l~~~~~------~~~~vli~agiHG~E~~g~~~~~~l~~~l~~~------------~~~~~iipvvNPDG 83 (237)
T PRK10602 22 RSLLGAPLLWFPAPAA------SRESGLILAGTHGDETASVVTLSCALRTLTPS------------LRRHHVVLAVNPDG 83 (237)
T ss_pred cccCCCceEEEEcCCC------CCceEEEEecCCCCcHHHHHHHHHHHHhhhhh------------ccceEEEEEECccc
Confidence 6999999999999752 57899999999999999999999999998752 33578999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCc-c---------------------ccCCCCCCCHHHHHHHHHHHhcceEEEE
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPD-Y---------------------FKQNNKRGQPETDAVKEWTSKIQFVLSG 138 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~-~---------------------~~g~~~~sepEt~al~~~~~~~~~~~~i 138 (315)
|++. .|.||+|+|||||||. . |.|+.|+|||||+++++++.++++++++
T Consensus 84 ~~~~---------~R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~SepEt~al~~~i~~~~~~~~~ 154 (237)
T PRK10602 84 CQLG---------LRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRLQPAWVV 154 (237)
T ss_pred cccc---------cccCCCCCchhhcCCCcccccccccccccCCCCccchhhccCCCCCCCHHHHHHHHHHHHcCCCEEE
Confidence 9876 6789999999999996 3 3467899999999999999999999999
Q ss_pred eecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCC
Q psy7350 139 GLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSL 218 (315)
Q Consensus 139 dlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~ 218 (315)
++|+ ||....+ +
T Consensus 155 s~Hs-------P~~~~~~-------------~------------------------------------------------ 166 (237)
T PRK10602 155 SFHD-------PLACIED-------------P------------------------------------------------ 166 (237)
T ss_pred Eeec-------cccccCC-------------c------------------------------------------------
Confidence 9999 4432110 0
Q ss_pred CCCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCch
Q psy7350 219 TPDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELP 298 (315)
Q Consensus 219 ~pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~ 298 (315)
.-.++.+.||++|.. +.+ ....|+++|++.||++ ..|+..+|+|+++ ++.++++.
T Consensus 167 -~~~~~~~~la~af~~--------------------~~~-~~~~y~~~Gs~~~~a~-~~giP~it~El~~--~~~~~~v~ 221 (237)
T PRK10602 167 -RHSELGEWLAQAFEL--------------------PLV-TSVGYETPGSFGSWCA-DLNLHCITAELPP--ISADEASE 221 (237)
T ss_pred -cchHHHHHHHHHhCC--------------------CeE-eecCCCCCCcHHHHHH-HcCCcEEEEecCC--cCcHHHHH
Confidence 012334445554321 111 1256888999999998 5799899999997 78888888
Q ss_pred HHHHHhHHH
Q psy7350 299 KMWEENRLR 307 (315)
Q Consensus 299 ~~w~~n~~~ 307 (315)
..|..-+..
T Consensus 222 ~~~~~~~~~ 230 (237)
T PRK10602 222 KYLFAMANL 230 (237)
T ss_pred HHHHHHHHH
Confidence 888776543
No 35
>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc
Probab=99.98 E-value=3e-31 Score=242.00 Aligned_cols=140 Identities=23% Similarity=0.342 Sum_probs=121.4
Q ss_pred CCCCCceEEEEEEeCCCC--CCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCc
Q psy7350 1 MACTRRDLWVMVVSASPY--EHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNP 78 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~--~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NP 78 (315)
+|+|||+|++++|++... ....+||.|+|+|++||+|++|+.+++.+++.|+. .++.++.+++++.|+|||++||
T Consensus 20 ~S~eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~---~~~~~~~Ll~~~~~~iiPm~NP 96 (258)
T cd06235 20 TTLGGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLS---DSPEAQYLRENFIFKIIPMLNP 96 (258)
T ss_pred EcCCCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhc---CCHHHHHHHhccEEEEEccccc
Confidence 589999999999997431 12357999999999999999999999999999987 4678999999999999999999
Q ss_pred hhhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc----ceEEEEeecCCcce-eeecCCC
Q psy7350 79 DGYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI----QFVLSGGLHGGALV-ASYPFDN 153 (315)
Q Consensus 79 DG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~----~~~~~idlH~~~~~-~~~P~~~ 153 (315)
||+.+. ..|.|+.|+||||||.. +.++++||++++++++.+. ++++++|+|+++.. ..|+|+.
T Consensus 97 DG~~~g--------~~R~n~~GvDLNR~w~~----p~~~~~PE~~~~~~~i~~~~~~~~~~~~iDlH~~s~~~~~F~yg~ 164 (258)
T cd06235 97 DGVIHG--------NYRCSLSGIDLNRQWKN----PDKKLHPEIYHVKQLIKKLSQERNIALFIDLHGHSRKKNSFMYGC 164 (258)
T ss_pred cceeec--------CCcCCCCCCCcCCCCCC----CCcccCcHHHHHHHHHHHHhccCCceEEEecccccccCCeeeecC
Confidence 999763 27899999999999964 5679999999999999987 89999999999984 4567765
Q ss_pred CC
Q psy7350 154 TP 155 (315)
Q Consensus 154 ~~ 155 (315)
..
T Consensus 165 ~~ 166 (258)
T cd06235 165 SN 166 (258)
T ss_pred CC
Confidence 53
No 36
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.97 E-value=2e-29 Score=225.55 Aligned_cols=127 Identities=30% Similarity=0.474 Sum_probs=114.8
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++|++ ++|+|+|.|++||+|++|+++++.|+++|+.. .+..+++++++++|+|||++||||
T Consensus 17 ~S~eGrpI~~l~ig~-------g~~~vli~agiHG~E~~g~~all~ll~~L~~~--~~~~~~~ll~~~~v~iiP~lNPDG 87 (231)
T cd06239 17 KSVEGRPIYSVKFGS-------GKIKILLWSQMHGNESTTTKALLDLLNFLGTS--KDQEAKKILDEVTLVIIPMLNPDG 87 (231)
T ss_pred ECCCCCeEEEEEEcC-------CCcEEEEEeccCCCCHHHHHHHHHHHHHHHHC--CCHHHHHHHhCCEEEEEeccCccH
Confidence 589999999999986 57999999999999999999999999999985 455668999999999999999999
Q ss_pred hhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCC
Q psy7350 81 YEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 154 (315)
Q Consensus 81 ~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~ 154 (315)
++.. +|.|+.|+||||||+ +.++||++++++++.++++++++|||+++.+ |....+
T Consensus 88 ~~~~---------~R~N~~GvDLNRdf~-------~~s~PEtr~l~~~~~~~~pd~~iDlH~~~~~--y~~~~~ 143 (231)
T cd06239 88 AEAY---------TRVNANGVDLNRDAQ-------DLSQPESRLLRDVYDGFQPDFCFNLHDQRTI--YGVENT 143 (231)
T ss_pred HHHc---------ccCCCcCCcCCCCCC-------CCChHHHHHHHHHHHhcCCEEEEEECCCCCc--cCCCCC
Confidence 9874 688999999999996 4689999999999999999999999999997 554443
No 37
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.97 E-value=1.1e-29 Score=228.21 Aligned_cols=127 Identities=26% Similarity=0.348 Sum_probs=114.9
Q ss_pred CCCCCceEEEEEEeCCCCC---CCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCC
Q psy7350 1 MACTRRDLWVMVVSASPYE---HMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMN 77 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~---~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~N 77 (315)
+|+|||+|++++|++..+. ....+|.|+|++++||+|++|+++++.++++|+.. .++.++++|++++|+|+|++|
T Consensus 3 ~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~~--~~~~~~~lL~~~~i~ivP~~N 80 (236)
T cd06243 3 TSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAFG--EDEELVPLLHQTTVLFVPTAN 80 (236)
T ss_pred cCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHhc--CCHHHHHHHhcceEEEEeCcC
Confidence 6999999999999976532 13478999999999999999999999999999873 688899999999999999999
Q ss_pred chhhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCC-cc
Q psy7350 78 PDGYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGG-AL 145 (315)
Q Consensus 78 PDG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~-~~ 145 (315)
|||+++. +|.|+.|+||||||+ +.++||++++++++.+++|++++|+|++ +.
T Consensus 81 PDG~~~~---------~R~n~~g~DlNRd~~-------~~~~pEt~al~~~~~~~~p~~~iDlHe~~g~ 133 (236)
T cd06243 81 PDGREAD---------TRSNADGIDINRDHL-------LLNTPEAQALASVLRDYRPDVVVDAHEYPGA 133 (236)
T ss_pred ccHhhcC---------CcCCCCCcccCCCCC-------CCCCHHHHHHHHHHHhcCCEEEEEeCCCCCC
Confidence 9999875 788999999999996 3689999999999999999999999999 54
No 38
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.96 E-value=2.1e-29 Score=232.48 Aligned_cols=142 Identities=20% Similarity=0.335 Sum_probs=124.7
Q ss_pred CCCCCceEEEEEEeCCCCC---------------------CCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCCh
Q psy7350 1 MACTRRDLWVMVVSASPYE---------------------HMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDP 59 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~---------------------~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~ 59 (315)
+|.|||+|++|+|++..+. ...+||.|+|+|++||+||+|+.++++++++|+.. .|+
T Consensus 23 ~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~Ll~~--~d~ 100 (304)
T cd06236 23 YSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFLLNK--DDP 100 (304)
T ss_pred ECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHHHhC--CCH
Confidence 5899999999999975431 12479999999999999999999999999999984 588
Q ss_pred HHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc----ceE
Q psy7350 60 YIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI----QFV 135 (315)
Q Consensus 60 ~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~----~~~ 135 (315)
.++.++++++|+||||+||||+++.. .|.++.|+||||+| .++.++++||++++++++... +++
T Consensus 101 ~a~~L~~~~~~~IvPmlNPDGv~~g~--------~R~~~~G~DLNR~y----~~p~~~~~Pei~aik~~i~~~~~~~~i~ 168 (304)
T cd06236 101 RAALLRRRFVFKLIPMLNPDGVYRGH--------YRTDTRGVNLNRVY----LNPDPELHPSIYAIKKLILYLHEESRLA 168 (304)
T ss_pred HHHHHHhCCeEEEEEeEcccccccCc--------cccCCcCCCcCcCC----CCCCcccCHHHHHHHHHHHHhhccCCce
Confidence 89999999999999999999998752 68899999999995 678899999999999999864 599
Q ss_pred EEEeecCCccee-eecCCCCCC
Q psy7350 136 LSGGLHGGALVA-SYPFDNTPN 156 (315)
Q Consensus 136 ~~idlH~~~~~~-~~P~~~~~~ 156 (315)
++||||+++... .|+|+....
T Consensus 169 ~yiDlH~hs~~~~~F~Yg~~~~ 190 (304)
T cd06236 169 FYIDLHAHASKRGCFIYGNALE 190 (304)
T ss_pred EEEEecccccccceEeeecCCC
Confidence 999999999965 488887643
No 39
>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.96 E-value=3.7e-29 Score=229.25 Aligned_cols=127 Identities=28% Similarity=0.310 Sum_probs=113.1
Q ss_pred CCCCCceEEEEEEeCCCC-CCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCch
Q psy7350 1 MACTRRDLWVMVVSASPY-EHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPD 79 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~-~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPD 79 (315)
+|+|||+|++++|++... .....||.|+|+|+|||+|++|+++++.++++|+.. +...++|++++|+|+|++|||
T Consensus 30 ~S~eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~~L~~~----~~~~~lL~~~~i~ivP~~NPD 105 (268)
T cd06242 30 KSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPAGDEAALALLGKLDNN----PKWASVLEKIDIIVLPRYNPD 105 (268)
T ss_pred cccCCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHHHHHHHHHHHHHHHhC----chHHHHHhcCeEEEEeccCcc
Confidence 699999999999997542 123579999999999999999999999999999974 234589999999999999999
Q ss_pred hhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCccee
Q psy7350 80 GYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVA 147 (315)
Q Consensus 80 G~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~ 147 (315)
|+++. .|.|+.|+||||||. +.++||++++++++.+++|+++||+|++++..
T Consensus 106 G~~~~---------~R~na~g~DlNRD~~-------~~~~pEtra~~~~~~~~~P~v~iD~He~~~~~ 157 (268)
T cd06242 106 GSAYF---------QRTLATGYDPNRDHT-------KLARQQTRDIKEAFSKFNPHIAIDAHEYGAFR 157 (268)
T ss_pred hhhhc---------cccCCcCcccCCCCC-------cccCHHHHHHHHHHHHhCCcEEEEeccCCccc
Confidence 99886 688999999999994 57899999999999999999999999998864
No 40
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=99.96 E-value=4.4e-29 Score=216.12 Aligned_cols=102 Identities=27% Similarity=0.409 Sum_probs=92.3
Q ss_pred EEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCCC
Q psy7350 27 VKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNRN 106 (315)
Q Consensus 27 v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRn 106 (315)
|+|+|++||+|++|+++++++++.|+.. .|++.+|+|||++||||+++. +|.|.+|+|||||
T Consensus 1 vli~agiHG~E~~g~~~~~~l~~~l~~~---------~l~~~~i~ivP~~NPdG~~~~---------~R~n~~gvDLNRn 62 (178)
T cd06904 1 VLIIGGIHGDEPASVSDLEELLRILPGL---------ILRGLSWYVIPVLNPDGLLRA---------TRCNANGVDLNRN 62 (178)
T ss_pred CEEEeccCCCCHHHHHHHHHHHHHHHHH---------hhcCCeEEEEeCcCccHHhhC---------cccCCCCcChhhc
Confidence 5899999999999999999999999874 377899999999999999875 7888899999999
Q ss_pred CCccc-----------cCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcce
Q psy7350 107 FPDYF-----------KQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALV 146 (315)
Q Consensus 107 fp~~~-----------~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~ 146 (315)
||..| .|+.+.++|||+++.+++.+.+++++||+|+++..
T Consensus 63 Fp~~~~~~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~ 113 (178)
T cd06904 63 FPTKDWPPGASRYRRYPGPKPGSEPESRALMDLIERFKPDVVVSFHAPLGV 113 (178)
T ss_pred CCccccccCCCcccccCCCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCe
Confidence 99765 46788999999999999999999999999997554
No 41
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=99.96 E-value=2.2e-28 Score=221.31 Aligned_cols=140 Identities=21% Similarity=0.323 Sum_probs=119.8
Q ss_pred CCCCCceEEEEEEeCCCC--CCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCc
Q psy7350 1 MACTRRDLWVMVVSASPY--EHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNP 78 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~--~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NP 78 (315)
+|+|||+|++|+|++... .....||.|+|+|++|++|+.++.++..+++.|+. +|+.++.++++++|+||||+||
T Consensus 21 ~S~eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~~s~~~~gll~~L~~---~~~~a~~Lr~~~~f~IvPmlNP 97 (261)
T cd06907 21 RTLAGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETNASWMMKGFLDFLTS---NSPDAQLLRDTFIFKIVPMLNP 97 (261)
T ss_pred ECCCCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHHHHHHHHHHHHHHhc---CCHHHHHHHhcCCEEEEEeecC
Confidence 599999999999987432 12347999999999999999999999999999986 6889999999999999999999
Q ss_pred hhhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHh----cceEEEEeecCCccee-eecCCC
Q psy7350 79 DGYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSK----IQFVLSGGLHGGALVA-SYPFDN 153 (315)
Q Consensus 79 DG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~----~~~~~~idlH~~~~~~-~~P~~~ 153 (315)
||+.+. ..|.++.|+||||||.. +.+...||+.++++++.. .++++++|||++++.. .|||++
T Consensus 98 DGv~~G--------~~R~~~~G~DLNR~w~~----p~~~~~P~i~~~k~li~~l~~~~~i~~ylDlHghs~~~~~F~yG~ 165 (261)
T cd06907 98 DGVIVG--------NYRCSLAGRDLNRNYKT----PLKDSFPTIWYTKNMVKRLLEEREVILYCDLHGHSRKNNVFMYGC 165 (261)
T ss_pred cccccc--------CCcCCCcCCCCCcCCCC----CCcccCchHHHHHHHHHHHHhcCCeEEEEEeccchhccceEeecC
Confidence 999865 36899999999999864 457788998777776554 3699999999999974 589987
Q ss_pred CC
Q psy7350 154 TP 155 (315)
Q Consensus 154 ~~ 155 (315)
..
T Consensus 166 ~~ 167 (261)
T cd06907 166 EN 167 (261)
T ss_pred CC
Confidence 64
No 42
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.96 E-value=5.9e-29 Score=225.29 Aligned_cols=135 Identities=26% Similarity=0.247 Sum_probs=117.4
Q ss_pred CCCCCceEEEEEEeCCCC----------------------CC----CCCCCeEEEEccccCCChhHHHHHHHHHHHHHHh
Q psy7350 1 MACTRRDLWVMVVSASPY----------------------EH----MIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDN 54 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~----------------------~~----~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~ 54 (315)
||+|||+|+++.|++.+. .+ ...++.|++++++||+|+.|+++++.++++|+.+
T Consensus 3 kS~eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~g~~a~l~ll~~L~~~ 82 (268)
T cd06244 3 KSAEGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETPGIDAQTELIEELAQE 82 (268)
T ss_pred cCCCCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHHHHHHHHHHHHHHHhc
Confidence 799999999999998640 00 1246778888999999999999999999999987
Q ss_pred cCC--------------ChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCH
Q psy7350 55 YNT--------------DPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQP 120 (315)
Q Consensus 55 ~~~--------------d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sep 120 (315)
+.. ++.++++|+++.|+|+|++||||+++. +|.|++|+||||||.. .++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~i~~lL~~~~i~i~P~~NPDG~~~~---------~R~Na~G~DLNRD~~~-------~sqp 146 (268)
T cd06244 83 DEIEFNTTDADGNEVTETLDVDDLLEKVIFLFNVTENPDGRVAG---------TRENANGFDLNRDNSF-------QTQP 146 (268)
T ss_pred ccccccccccccccccCCHHHHHHHhcCEEEEEecccCCcceee---------eecCCCccccCCCCCc-------ccCH
Confidence 532 888999999999999999999999875 7899999999999953 5899
Q ss_pred HHHHHHHHHHhcceEEEEeecCCcceeee-cC
Q psy7350 121 ETDAVKEWTSKIQFVLSGGLHGGALVASY-PF 151 (315)
Q Consensus 121 Et~al~~~~~~~~~~~~idlH~~~~~~~~-P~ 151 (315)
||+++++++.+++|++++|+|++....+| |.
T Consensus 147 Et~av~~~~~~w~P~~~~dlHg~~~~~~~~P~ 178 (268)
T cd06244 147 ETQAIVALIAEWNPASFLDLHGYVEGFLIEPC 178 (268)
T ss_pred HHHHHHHHHHHhCCeEEEEeCCCCCceEEcCC
Confidence 99999999999999999999998855444 73
No 43
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.96 E-value=5.5e-28 Score=216.82 Aligned_cols=125 Identities=33% Similarity=0.460 Sum_probs=111.5
Q ss_pred CCCCCceEEEEEEeCCCCC-----CCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcC
Q psy7350 1 MACTRRDLWVMVVSASPYE-----HMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPS 75 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~-----~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~ 75 (315)
+|+|||+|++++|++.... ...+||+|+|.|++||+|+.|+++++.++++|+.. +...+.+|++.+|+|||+
T Consensus 3 ~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a~~~l~~~l~~~---~~~~~~ll~~~~i~ivP~ 79 (226)
T cd03857 3 KSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASA---SDEEAKMLENIVIVLIPR 79 (226)
T ss_pred cCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHHHHHHHHHHHhC---CHHHHHHHhCCEEEEEec
Confidence 6999999999999974321 22478999999999999999999999999999873 445688999999999999
Q ss_pred CCchhhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCc
Q psy7350 76 MNPDGYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGA 144 (315)
Q Consensus 76 ~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~ 144 (315)
+||||++.. +|.|+.|+||||||+. .++||++++.+++.++++++++|+|+++
T Consensus 80 ~NPDG~~~~---------~R~n~~g~DLNRd~~~-------~~~pEt~~~~~~~~~~~p~~~iDlH~~~ 132 (226)
T cd03857 80 ANPDGAALF---------TRENANGLDLNRDFLK-------LTQPETRAVREVFIEWKPQFFIDLHEYG 132 (226)
T ss_pred cCCChHHhc---------cccCCCcccCCCCCCC-------cCCHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 999999886 6889999999999974 4899999999999999999999999994
No 44
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.95 E-value=8.7e-28 Score=219.98 Aligned_cols=141 Identities=28% Similarity=0.288 Sum_probs=118.2
Q ss_pred CCCCCceEEEEEEeCCCC-----CCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcC
Q psy7350 1 MACTRRDLWVMVVSASPY-----EHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPS 75 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~-----~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~ 75 (315)
+|.|||+|++++|+.... ....+||.|+|+|||||+|+.|+++++.|+++|+.+. . .++|++++|+|||+
T Consensus 20 ~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a~~~ll~~L~~~~--~---~~ll~~~~i~ivP~ 94 (266)
T cd06241 20 KTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDAGLMLLRDLADGK--K---DALLDKVVLVFIPV 94 (266)
T ss_pred eCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHHHHHHHHHHHhcc--h---HHHHhCCEEEEEeC
Confidence 699999999999986431 1224799999999999999999999999999999842 2 27999999999999
Q ss_pred CCchhhhhhhcccccC------CCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeee
Q psy7350 76 MNPDGYEVAREGQCEG------GQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASY 149 (315)
Q Consensus 76 ~NPDG~~~~~~~~~~~------~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~ 149 (315)
+||||+++.....|.. ..+|.|++|+||||||+. .++||++++++++.+.+|+++||+|+.++. .|
T Consensus 95 ~NpDG~~~~~~~~r~~q~gp~~~~~R~na~g~DLNRdf~~-------~~~pEtra~~~~~~~~~p~~~iD~H~~~g~-~~ 166 (266)
T cd06241 95 FNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNRDFIK-------LDAPEMRAFAKLFNKWNPDLFIDNHVTDGA-DY 166 (266)
T ss_pred CCccHHHhcccccccccCCCCccCceecccceecCCCCcc-------cCCHHHHHHHHHHHHhCCCEEEEeccCCCc-Cc
Confidence 9999999875443321 247889999999999963 579999999999999999999999998764 66
Q ss_pred cCCCC
Q psy7350 150 PFDNT 154 (315)
Q Consensus 150 P~~~~ 154 (315)
+|+.+
T Consensus 167 ~yd~t 171 (266)
T cd06241 167 QYDLT 171 (266)
T ss_pred eeeec
Confidence 66544
No 45
>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.94 E-value=1.7e-26 Score=211.04 Aligned_cols=138 Identities=22% Similarity=0.211 Sum_probs=115.6
Q ss_pred CCCCCceEEEEEEeCCCC---------------------------CCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHH
Q psy7350 1 MACTRRDLWVMVVSASPY---------------------------EHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVD 53 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~---------------------------~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~ 53 (315)
+|+|||+|++++|++..+ .....||.|+|.++|||+|++|++++++++++|+.
T Consensus 7 kS~EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l~~~L~~ 86 (273)
T cd06240 7 KTEEGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMELAYRLAT 86 (273)
T ss_pred cCCCCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHHHHHHHh
Confidence 699999999999996432 01346999999999999999999999999999998
Q ss_pred hcCCChHHHHhhcCceEEEEcCCCchhhhhhhccccc-----------CCCCCCcCCCcCCCCCCCccccCCCCCCCHHH
Q psy7350 54 NYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCE-----------GGQGRYNARGFDLNRNFPDYFKQNNKRGQPET 122 (315)
Q Consensus 54 ~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~-----------~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt 122 (315)
+ .|+.++++|+++.|+|+|++||||++....+.+. .+..|.+..|+||||+| ...+.||+
T Consensus 87 ~--~d~~~~~lLd~~~i~i~P~~NPDG~er~~~w~~~~~~~~~~~~~~~~~~~~~y~g~DlNRD~-------~~~~~~et 157 (273)
T cd06240 87 E--EDPEIKRILDNVIVLIVPVANPDGRDRVVDWYMRTLGPPKRDRSPLPPLYGKYVGHDNNRDG-------YMNQQETT 157 (273)
T ss_pred c--CCHHHHHHHhcCEEEEEeCcCCCHHHHhhhhhhhccCCcccCCCCcccccCccCCcCCCccc-------chhcCHHH
Confidence 5 7899999999999999999999999975321111 11124567899999998 34688999
Q ss_pred HHHHHHHHhcceEEEEeecCCccee
Q psy7350 123 DAVKEWTSKIQFVLSGGLHGGALVA 147 (315)
Q Consensus 123 ~al~~~~~~~~~~~~idlH~~~~~~ 147 (315)
+++.+++.++.|++++|+|.+|...
T Consensus 158 ~~~~~~~~~w~P~v~~D~He~g~~~ 182 (273)
T cd06240 158 NNSRKLFLEWHPQIMYDLHQSGPAG 182 (273)
T ss_pred HHHHHHHHhcCCcEEEEcccCCCCC
Confidence 9999999999999999999987643
No 46
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=99.91 E-value=4e-24 Score=194.35 Aligned_cols=138 Identities=20% Similarity=0.314 Sum_probs=113.9
Q ss_pred CCCCCceEEEEEEeCCCCCC-------CCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEE
Q psy7350 1 MACTRRDLWVMVVSASPYEH-------MIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHIL 73 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~-------~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~ii 73 (315)
+|.+||++.+|+|++.+... ...||.|+|+|++|++|..|+.++..+++.|+. +|+.++.|+++++|+||
T Consensus 22 ~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~g~l~~L~~---~d~~a~~Lr~~~~f~Iv 98 (278)
T cd06906 22 ETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMKGTLEFLMS---SSPTAQSLRESYIFKIV 98 (278)
T ss_pred eccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHHHHHHHHhC---CCHHHHHHHHhCcEEEE
Confidence 58999999999999854321 137999999999999999999999999999886 68999999999999999
Q ss_pred cCCCchhhhhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHH---HHHHHHHHHhc--ceEEEEeecCCcce-e
Q psy7350 74 PSMNPDGYEVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPE---TDAVKEWTSKI--QFVLSGGLHGGALV-A 147 (315)
Q Consensus 74 P~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepE---t~al~~~~~~~--~~~~~idlH~~~~~-~ 147 (315)
||+||||+.+. ..|++..|+||||||. .+.+...|+ ++++.+++.+. .+.+++|+|+++.. -
T Consensus 99 PmlNPDGvv~G--------n~Rc~~~G~DLNR~w~----~p~~~~~P~i~~~k~l~~~l~~~~~~~~~yiDlHghs~~~~ 166 (278)
T cd06906 99 PMLNPDGVING--------NHRCSLSGEDLNRQWQ----SPNPELHPTIYHTKGLLQYLAAIKRSPLVYCDYHGHSRKKN 166 (278)
T ss_pred eeecCccceec--------ccccCCCCCCCCCCCC----CCCcccChHHHHHHHHHHHHHHhCCCceEEEeecccccccc
Confidence 99999999765 3788899999999985 356777787 55666776653 58899999999984 2
Q ss_pred eecCCC
Q psy7350 148 SYPFDN 153 (315)
Q Consensus 148 ~~P~~~ 153 (315)
.|=|+.
T Consensus 167 ~F~yG~ 172 (278)
T cd06906 167 VFMYGC 172 (278)
T ss_pred eEEecc
Confidence 344443
No 47
>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.91 E-value=5.7e-24 Score=191.40 Aligned_cols=114 Identities=26% Similarity=0.465 Sum_probs=102.4
Q ss_pred CCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhh
Q psy7350 4 TRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEV 83 (315)
Q Consensus 4 eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~ 83 (315)
+|++|+++++.+.. .++|.|+|+||+||+|+.|+.++++|+++|... ++++++|+|+|++||||++.
T Consensus 26 ~~~pL~~l~~~~~~----~~~p~vlI~gGiHG~E~~G~~a~l~~l~~l~~~---------~l~~~~i~ivP~vNPdG~~~ 92 (236)
T cd06231 26 QSYPLYALKSRGWD----SDLPRVLITAGIHGDEPAGPLGALEFLRAAALE---------LAQDVNLSVYPCINPSGFEA 92 (236)
T ss_pred CCeeEEEEEcCCCC----CCCCEEEEECCCCCCcHHHHHHHHHHHHHHHHH---------HhcCCeEEEEECcChhHHhc
Confidence 59999999997532 478999999999999999999999999998752 78889999999999999987
Q ss_pred hhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc--ceEEEEeecCCcc
Q psy7350 84 AREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI--QFVLSGGLHGGAL 145 (315)
Q Consensus 84 ~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~--~~~~~idlH~~~~ 145 (315)
. +|.|+.|+||||||+. ..++||++++++++.+. +++++||||+++.
T Consensus 93 ~---------~R~n~~g~DLNR~F~~------~~~~~E~~al~~~~~~~~~~~~~~IDLH~~~~ 141 (236)
T cd06231 93 I---------TRWNRNGIDPNRSFRS------ESPSPEVRLLMEWLRRLGAAFDLHIDLHEDTE 141 (236)
T ss_pred C---------ccCCCCCccccCCCCC------CCCCHHHHHHHHHHHHhCCCcEEEEEeCCCCC
Confidence 5 6889999999999984 45789999999999988 7999999999984
No 48
>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.91 E-value=7.9e-24 Score=186.45 Aligned_cols=118 Identities=26% Similarity=0.257 Sum_probs=101.1
Q ss_pred CCCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchh
Q psy7350 1 MACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDG 80 (315)
Q Consensus 1 ~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG 80 (315)
+|+|||+|++++|+ .+||.|+|+||+||+||+|+..+++++++|+. +++++|+|+|++||||
T Consensus 22 ~S~EGR~I~~l~i~-------~~Kp~I~I~gGvHarEwig~~~al~fi~~L~~-----------~~~~n~~I~P~vNPDG 83 (240)
T cd06232 22 RSRQGRPVTGRYVA-------GLDHPVVISAGQHANETSGVVGALRAAEALAA-----------RPGAHFALIPLENPDG 83 (240)
T ss_pred cccCCCeeeEEEec-------CCCcEEEEeCCcCCCcchhHHHHHHHHHHHhc-----------cCCceEEEEEeeCCcH
Confidence 59999999999993 26899999999999999999999999999986 5789999999999999
Q ss_pred hhhhh---cccccCC--CCCCcCCCcCCC-CCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcc
Q psy7350 81 YEVAR---EGQCEGG--QGRYNARGFDLN-RNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGAL 145 (315)
Q Consensus 81 ~~~~~---~~~~~~~--~~R~n~~GvDLN-Rnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~ 145 (315)
|++.+ +.+..|. -.|.++.|.|+| |+++ ++ .|++++++++.+..+++.||+|++-.
T Consensus 84 Ye~~~~L~r~nP~~~hHaaR~~A~g~D~~fr~~~-------~~--~Es~~~~~~~~~~~~~~hiDlHeyp~ 145 (240)
T cd06232 84 YALHERLRAEHPRHMHHAARYTALGDDLEYREFP-------PF--GEREARHQALAKSGAQLHVNLHGYPA 145 (240)
T ss_pred HHhhchhhccCcccccchhhhcccCCCcccccCC-------cc--hHHHHHHHHHHhhCCcEEEECCCCCc
Confidence 99975 3333332 238899999999 8763 22 78999999999999999999999765
No 49
>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.64 E-value=2.7e-15 Score=139.34 Aligned_cols=109 Identities=25% Similarity=0.334 Sum_probs=79.8
Q ss_pred EEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcc
Q psy7350 8 LWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREG 87 (315)
Q Consensus 8 i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~ 87 (315)
|.++.|... ...|+|+|+||+||+|+.|..++..++++|.. ...+.+++++|++||.|+...
T Consensus 9 ~pv~~~~g~-----~~gp~v~i~~giHGdE~~G~~~~~~l~~~l~~----------~~~~g~v~~vp~~Np~a~~~~--- 70 (287)
T cd06251 9 IPVHVIRGK-----KPGPTLLLTAAIHGDELNGVEIIRRLLRQLDP----------KTLRGTVIAVPVVNVFGFLNQ--- 70 (287)
T ss_pred eeEEEEeCC-----CCCCEEEEEcCccCCchhHHHHHHHHHhcCCc----------ccCceEEEEEeCCCHHHHHhc---
Confidence 467777543 24589999999999999999999999887743 122468899999999999875
Q ss_pred cccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc--ceEEEEeecCCcc
Q psy7350 88 QCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI--QFVLSGGLHGGAL 145 (315)
Q Consensus 88 ~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~--~~~~~idlH~~~~ 145 (315)
.|.+..|.||||+||... ..+++.+....+++.. .+|++||||+++.
T Consensus 71 ------~R~~~d~~dlNR~fpg~~-----~g~~~~~~a~~i~~~~~~~~d~~iDlHs~~~ 119 (287)
T cd06251 71 ------SRYLPDRRDLNRSFPGSK-----NGSLASRIAHLFFTEILSHADYGIDLHTGAI 119 (287)
T ss_pred ------cccCCCccCHhhcCCCCC-----CCCHHHHHHHHHHHHHHhhCCEEEEcCCCCC
Confidence 566668999999999633 2234433333333332 3899999999864
No 50
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=99.61 E-value=8.6e-15 Score=139.77 Aligned_cols=132 Identities=21% Similarity=0.268 Sum_probs=91.5
Q ss_pred CceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhh
Q psy7350 5 RRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVA 84 (315)
Q Consensus 5 GR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~ 84 (315)
-+.|++.+|+.. ...|+|+|+|++||+|+.|..++.++++.|......+ .+ +.+|++||++||+|+...
T Consensus 13 ~~~ipv~~~~g~-----~~gp~v~i~agiHGdE~~G~~~~~~L~~~l~~~~~~~-----~l-~G~v~ivP~~Np~g~~~~ 81 (359)
T cd06250 13 ERELTVFRFGGA-----GAGPKVYIQASLHADELPGMLVLHHLIELLKKLEAEG-----RI-LGEITLVPVANPIGLNQR 81 (359)
T ss_pred eEEEEEEEEeCC-----CCCCEEEEEeccccCchHHHHHHHHHHHHHhhhcccc-----cc-CceEEEEeCcChHHHHhh
Confidence 367888888742 2369999999999999999999999999998732111 23 568999999999999764
Q ss_pred hcccccCCCCCCc-CCCcCCCCCCCccccC------------------------------CCCCCCHHHHHHHHHHHhc-
Q psy7350 85 REGQCEGGQGRYN-ARGFDLNRNFPDYFKQ------------------------------NNKRGQPETDAVKEWTSKI- 132 (315)
Q Consensus 85 ~~~~~~~~~~R~n-~~GvDLNRnfp~~~~g------------------------------~~~~sepEt~al~~~~~~~- 132 (315)
. +.|..+|.. ..|.||||.||..=.. ..+.++ .+..++..+.+.
T Consensus 82 ~---~~~~~~R~~p~dg~dlNR~FPg~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~rla~~l~~~~ 157 (359)
T cd06250 82 L---GGFHLGRFDLASGTNFNRDFPDLADAVADFVEGHLTSDPAANVALVRQALREALAALLPPTE-LQSTLRLTLQRLA 157 (359)
T ss_pred c---cccccccccCCCCCccCcCCCCcchhhHHHhhhhcccchHHHHHHHHHHHHHHHhccCCCcc-HHHHHHHHHHHHh
Confidence 2 233345654 5899999999963100 000111 233355544443
Q ss_pred -ceEEEEeecCCcceeeecC
Q psy7350 133 -QFVLSGGLHGGALVASYPF 151 (315)
Q Consensus 133 -~~~~~idlH~~~~~~~~P~ 151 (315)
+.|++||||+++....|.|
T Consensus 158 ~~aD~~IDLHsg~~~~~~vy 177 (359)
T cd06250 158 LDADIVLDLHCDDEAVLHLY 177 (359)
T ss_pred hcCCEEEECCCCCccCceEE
Confidence 6999999999987544433
No 51
>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.59 E-value=3.5e-14 Score=133.66 Aligned_cols=110 Identities=23% Similarity=0.326 Sum_probs=82.2
Q ss_pred ceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhh
Q psy7350 6 RDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAR 85 (315)
Q Consensus 6 R~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~ 85 (315)
-.|++..|... ..|+|+|+||+||+|..|..++.+++++|... ....+++++|++||.|+...
T Consensus 22 ~~iPv~v~~g~------~gp~v~I~aGiHGdE~~G~~~~~~L~~~l~~~----------~l~G~vi~vP~~Np~a~~~~- 84 (316)
T cd06252 22 VMIPITVIKNG------DGPTVLLTGGNHGDEYEGQIALLRLARRLDPE----------EVRGRVIILPALNFPAVQAG- 84 (316)
T ss_pred eEeeEEEEeCC------CCCEEEEEccCCCCchHHHHHHHHHHHhCChh----------hCeEEEEEEeCCCHHHHHhc-
Confidence 46677777542 25899999999999999999999999988541 23679999999999999765
Q ss_pred cccccCCCCCCcC-CCcCCCCCCCccccCCCCCCCHHHHHHHHHHH-hc--ceEEEEeecCCcce
Q psy7350 86 EGQCEGGQGRYNA-RGFDLNRNFPDYFKQNNKRGQPETDAVKEWTS-KI--QFVLSGGLHGGALV 146 (315)
Q Consensus 86 ~~~~~~~~~R~n~-~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~-~~--~~~~~idlH~~~~~ 146 (315)
.|.+. .|.||||.||.. +..+.+ +.++.++. ++ +.|++||||+++..
T Consensus 85 --------~R~~p~D~~DLNR~Fpg~-----~~gs~~-~riA~~i~~~l~~~aD~~iDLHt~~~~ 135 (316)
T cd06252 85 --------TRTSPIDGGNLNRVFPGD-----PDGTVT-EMIAHYLTTELLPRADYVIDLHSGGRS 135 (316)
T ss_pred --------cccCCCCCCcHHhhCCCC-----CCCCHH-HHHHHHHHHhhhhcCcEEEEccCCCCc
Confidence 46553 689999999963 223344 34444443 33 68999999998654
No 52
>TIGR02994 ectoine_eutE ectoine utilization protein EutE. Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.
Probab=99.59 E-value=2.8e-14 Score=134.37 Aligned_cols=97 Identities=23% Similarity=0.350 Sum_probs=76.4
Q ss_pred CCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCc-CCCcC
Q psy7350 24 KPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYN-ARGFD 102 (315)
Q Consensus 24 kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n-~~GvD 102 (315)
.|+++|+|++||+|..|..++.+|++.|... .-+.+|++||++||-|+... .|.. ..|.|
T Consensus 47 gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~----------~l~G~v~~vP~~N~~g~~~~---------~r~~p~d~~n 107 (325)
T TIGR02994 47 GPTALLTGGNHGDEYEGPIALFELARTLDAE----------DVSGRIIIVPAMNYPAFRAG---------TRTSPIDRGN 107 (325)
T ss_pred CCEEEEEeccCCCchHHHHHHHHHHhhCChh----------hCcEEEEEEcCCCHHHHHhh---------CCCCCCCCCc
Confidence 4899999999999999999999999988441 23678999999999999765 4443 37899
Q ss_pred CCCCCCccccCCCCCCCHHHHHHHHHHH-hc--ceEEEEeecCCcc
Q psy7350 103 LNRNFPDYFKQNNKRGQPETDAVKEWTS-KI--QFVLSGGLHGGAL 145 (315)
Q Consensus 103 LNRnfp~~~~g~~~~sepEt~al~~~~~-~~--~~~~~idlH~~~~ 145 (315)
|||.||. .+..+. ++.++.++. +. ..|++||||+++.
T Consensus 108 lNR~fPG-----~~~gs~-~~riA~~l~~~l~~~aD~~iDlHs~~~ 147 (325)
T TIGR02994 108 LNRSFPG-----RPDGTV-TEKIADYFQRHLLPLADIVLDFHSGGK 147 (325)
T ss_pred cCCCCCC-----CCCCCH-HHHHHHHHHHhHHhhCCEEEECCCCCc
Confidence 9999996 233333 556666554 33 6899999999887
No 53
>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.58 E-value=2.2e-14 Score=133.35 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=85.3
Q ss_pred ceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhh
Q psy7350 6 RDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAR 85 (315)
Q Consensus 6 R~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~ 85 (315)
-.|.+.+|... ...|+|+|+|++||+|+.|..++..|++.|-. ...+..++++|++||.|++...
T Consensus 4 ~~~pv~~~~g~-----~~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~----------~~~~g~v~~vp~~N~~a~~~~~ 68 (288)
T cd06254 4 LAIPVTLINGV-----NPGPTLAITAGVHGGEYPGIQALQKLAREIDP----------AKLSGTLIIVHVLNLSGFYART 68 (288)
T ss_pred ccccEEEEeCC-----CCCCEEEEEecccCCchhHHHHHHHHHHhCCc----------ccCeEEEEEEeCcCHHHHHhcC
Confidence 35667777543 24599999999999999999999999988733 1236789999999999997641
Q ss_pred cccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc---ceEEEEeecCCcc-eeeecCC
Q psy7350 86 EGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI---QFVLSGGLHGGAL-VASYPFD 152 (315)
Q Consensus 86 ~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~---~~~~~idlH~~~~-~~~~P~~ 152 (315)
+ .+....|.||||.||....| .++..++.++.+. +.|++||||+++. ....||.
T Consensus 69 r-------~~~~~d~~dlNR~fpg~~~g------~~~~r~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~ 126 (288)
T cd06254 69 P-------YIVPEDGKNLNRVFPGDKDG------TLTERIAYFLTEEVIDKADFLIDLHSGDGNEQLRPYV 126 (288)
T ss_pred c-------ccCCCCCCchhhcCCCCCCC------CHHHHHHHHHHHHHHhhCcEEEECCCCCCccccCceE
Confidence 1 11245889999999974332 3455555555432 6899999999874 3345543
No 54
>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.54 E-value=1.4e-13 Score=128.38 Aligned_cols=113 Identities=22% Similarity=0.307 Sum_probs=81.0
Q ss_pred eEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhc
Q psy7350 7 DLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVARE 86 (315)
Q Consensus 7 ~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~ 86 (315)
.|...+++. +.|+|+|+|++||+|..|..++.+++++|....... .+..+.++++||++||.|+...
T Consensus 9 ~~~~~~~g~-------~gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~~~~~----~~~l~g~v~~vP~~N~~a~~~~-- 75 (298)
T cd06253 9 RIEGFNFGG-------GEKRICIVGGIHGDELQGLYICSLLIRFLKELEKRG----PLKLNGIVDVIPSVNPLGLNLG-- 75 (298)
T ss_pred EEEeeecCC-------CCcEEEEEccCccchHHHHHHHHHHHHHHhhhhccc----ccccCceEEEEeCcCHHHHHHh--
Confidence 445555552 468999999999999999999999999997631100 1233789999999999999765
Q ss_pred ccccCCCCCCc-CCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHh--cceEEEEeecCCcc
Q psy7350 87 GQCEGGQGRYN-ARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSK--IQFVLSGGLHGGAL 145 (315)
Q Consensus 87 ~~~~~~~~R~n-~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~--~~~~~~idlH~~~~ 145 (315)
.|.. ..|.||||.||..-. .++ +..++..+.+ .+.|++||||+++.
T Consensus 76 -------~R~~p~d~~dlNR~Fpg~~~-----g~~-~~riA~~~~~~~~~~d~~iDLHsg~~ 124 (298)
T cd06253 76 -------TRFWPTDNSDINRMFPGDPQ-----GET-TQRIAAAVFEDVKGADYCIDLHSSNI 124 (298)
T ss_pred -------hCcCCCCCCcccccCCCCCC-----CcH-HHHHHHHHHHHhcCCCEEEEccCCCc
Confidence 4554 378999999996322 222 3444443333 25899999999764
No 55
>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.53 E-value=7.2e-14 Score=128.41 Aligned_cols=81 Identities=26% Similarity=0.385 Sum_probs=68.1
Q ss_pred eEEEEEEeCCCCCCCCCCCeEEEEccccCCC-hhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhh
Q psy7350 7 DLWVMVVSASPYEHMIGKPDVKYVANMHGNE-AVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAR 85 (315)
Q Consensus 7 ~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E-~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~ 85 (315)
+|.++.|+... ..|.|+|++|+||.| .+|+.+++.+++++... .+..+..|++||++||.|+...
T Consensus 39 ~i~v~~~g~~~-----~~~~l~i~sGvHG~Eg~~Gs~~~~~ll~~~~~~--------~~~~~~~vi~vh~vNP~Gf~~~- 104 (283)
T cd06233 39 AIDVARLGPAD-----AKRLLVITSGTHGVEGFCGSAIQLALLRELLPR--------SLPAGVAVLLVHALNPYGFAHL- 104 (283)
T ss_pred eeeEEEEcCCC-----CCcEEEEEecccCCcccchHHHHHHHHHhcchh--------hccCCceEEEEeCcCHHHHhhc-
Confidence 47788887642 457999999999999 79999999999988652 3556789999999999999765
Q ss_pred cccccCCCCCCcCCCcCCCCCCCc
Q psy7350 86 EGQCEGGQGRYNARGFDLNRNFPD 109 (315)
Q Consensus 86 ~~~~~~~~~R~n~~GvDLNRnfp~ 109 (315)
.|.|.+||||||||-+
T Consensus 105 --------~R~nedgvDLNRnf~d 120 (283)
T cd06233 105 --------RRVNENNVDLNRNFLD 120 (283)
T ss_pred --------ccCCCCCCChhhcccc
Confidence 6789999999999953
No 56
>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3.5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....
Probab=99.52 E-value=5.2e-14 Score=130.77 Aligned_cols=104 Identities=25% Similarity=0.312 Sum_probs=78.5
Q ss_pred CCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcC-CCcC
Q psy7350 24 KPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNA-RGFD 102 (315)
Q Consensus 24 kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~-~GvD 102 (315)
-|+++|+|++||||+.|..++.+++++|... -...+++++|++||.|+... .|... .|.|
T Consensus 2 Gp~l~i~agvHGnE~~G~~a~~~L~~~l~~~----------~~~G~~~~vp~~N~~a~~~~---------~R~~~~d~~d 62 (292)
T PF04952_consen 2 GPTLLITAGVHGNEYNGIEALQRLLRELDPA----------DLSGTVIIVPVANPPAFRQG---------TRFVPIDGRD 62 (292)
T ss_dssp S-EEEEEE-SSTTBCHHHHHHHHHHHHHHGG----------GCTCEEEEEEESSHHHHHHT---------SSSSTTTSSB
T ss_pred CCEEEEEcCcccChHHHHHHHHHHHhcchhc----------ccCCceEEEEEeCHHHHHhc---------cccCCCCCCC
Confidence 3899999999999999999999999999763 24689999999999999876 45544 8999
Q ss_pred CCCCCCccccCCCCC---CCHHHHHHHHHHHhc---ceEEEEeecCCcce
Q psy7350 103 LNRNFPDYFKQNNKR---GQPETDAVKEWTSKI---QFVLSGGLHGGALV 146 (315)
Q Consensus 103 LNRnfp~~~~g~~~~---sepEt~al~~~~~~~---~~~~~idlH~~~~~ 146 (315)
|||.||..-.+.... ..-++..++..+.+. +.|++||||+++..
T Consensus 63 LNR~Fpg~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~aD~~iDLHs~~~~ 112 (292)
T PF04952_consen 63 LNRCFPGDALGSSLQEDYEATETERIAHALFEEILPDADYVIDLHSGSSS 112 (292)
T ss_dssp GGGSTTHHHHCHCTTHHHHHHHHHHHHHHHHHTTCCCGSEEEEEEEESST
T ss_pred HHHhCCCCccccccccccchhHHHHHHHHHhhhhhccceEEEEeccCCCC
Confidence 999999644331101 113466676666643 59999999998764
No 57
>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.51 E-value=1.2e-13 Score=128.70 Aligned_cols=109 Identities=23% Similarity=0.316 Sum_probs=81.1
Q ss_pred EEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcc
Q psy7350 8 LWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREG 87 (315)
Q Consensus 8 i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~ 87 (315)
|.+..|... ...|.++|+|++||+|..|..++..+++.|... ..+.+++++|++||.|+...
T Consensus 13 ~pv~~~~g~-----~~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~----------~~~g~~~~vp~~N~~a~~~~--- 74 (293)
T cd06255 13 LPVTILRGA-----EPGPTLWLHAQVHGNEYNGTQAIVDLYRSLDPA----------ALKGRLVALPTANPTALDAR--- 74 (293)
T ss_pred eeEEEEeCC-----CCCCEEEEEcccCCCcHHHHHHHHHHHHhCCHh----------hcCCeEEEEeCcCHHHHHhh---
Confidence 667777543 245999999999999999999999999987431 23568889999999999876
Q ss_pred cccCCCCCCcC-CCcCCCCCCCccccCCCCCCCHHHHHHHHHH-Hhc--ceEEEEeecCCcce
Q psy7350 88 QCEGGQGRYNA-RGFDLNRNFPDYFKQNNKRGQPETDAVKEWT-SKI--QFVLSGGLHGGALV 146 (315)
Q Consensus 88 ~~~~~~~R~n~-~GvDLNRnfp~~~~g~~~~sepEt~al~~~~-~~~--~~~~~idlH~~~~~ 146 (315)
.|.+. .+.||||.||.. +....+ ..++..+ +.. ..|++||||+++..
T Consensus 75 ------~R~~p~d~~dlNR~fpg~-----~~g~~~-~r~A~~~~~~~~~~~d~~iDlHs~~~~ 125 (293)
T cd06255 75 ------TRMSPFDELDLNRTFPGN-----PNGMVT-QQMAHALFEEVRGVADYLVDLHTMTTI 125 (293)
T ss_pred ------cccCCCCCCCcccCCCCC-----CCCCHH-HHHHHHHHHHHHhcCCEEEECCCCCCC
Confidence 56665 899999999852 222333 3333333 332 57999999999875
No 58
>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.49 E-value=1e-13 Score=126.39 Aligned_cols=102 Identities=26% Similarity=0.339 Sum_probs=77.9
Q ss_pred EEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCCC
Q psy7350 27 VKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNRN 106 (315)
Q Consensus 27 v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRn 106 (315)
|+|+||+||+|..|..++..+++++.... ..+.+++++|++||+|++.. .|.+. .||||+
T Consensus 1 v~i~agiHG~E~~g~~~~~~l~~~~~~~~---------~l~g~v~~vp~~N~~g~~~~---------~R~~~--~DLNR~ 60 (252)
T cd06230 1 VAVVGGVHGNEPCGVQAIRRLLAELDEGQ---------ALRGPVKLVPAANPLALEAG---------QRYLD--RDLNRI 60 (252)
T ss_pred CEEEcccCCCcHHHHHHHHHHHHHHhhhc---------ccccEEEEEeCcCHHHHHhC---------CCCCC--cCCCCC
Confidence 57999999999999999999999987620 34678999999999999875 45554 899999
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHhcc--eEEEEeecCCcceeeecCCC
Q psy7350 107 FPDYFKQNNKRGQPETDAVKEWTSKIQ--FVLSGGLHGGALVASYPFDN 153 (315)
Q Consensus 107 fp~~~~g~~~~sepEt~al~~~~~~~~--~~~~idlH~~~~~~~~P~~~ 153 (315)
||..-. ...+|.+....+.+.+. .++.||||+++. ...|+..
T Consensus 61 fpg~~~----~~~~~~~~a~~l~~~i~~~~d~~iDlH~~~~-~~~~~~~ 104 (252)
T cd06230 61 FPGDPD----SGTYEDRLAAELCPELEGLADAVLDLHSTSS-EGPPFIL 104 (252)
T ss_pred CCCCCC----CCCHHHHHHHHHHHHHhhhccEEEECCCCCC-CCCCEEE
Confidence 996321 14566665555555542 699999999998 4555553
No 59
>KOG3641|consensus
Probab=99.45 E-value=2.5e-13 Score=131.49 Aligned_cols=136 Identities=22% Similarity=0.351 Sum_probs=112.6
Q ss_pred CCCCceEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhh
Q psy7350 2 ACTRRDLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGY 81 (315)
Q Consensus 2 S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~ 81 (315)
|..||++.++.|.... ...+|.|++++.+|.+|..+..++..+++.|+. .++....+.+.+.+-|+||+||||+
T Consensus 410 tl~g~~~~l~tI~~ae---~~~~~~IfLSaRVHpgeTnsSwvmkGilefl~s---~~p~aq~LRe~~vFKI~PMLNPDGV 483 (650)
T KOG3641|consen 410 TLVGRAMALATIDMAE---CAPRPVIFLSARVHPGETNSSWVMKGILEFLVS---NSPLAQGLRESYVFKIVPMLNPDGV 483 (650)
T ss_pred eecCCccceEEeeHhh---cCCcceEEEecccCCCCCcHHHHHHHHHHHhhc---CCcHHHhhhhheeEecccccCCCce
Confidence 6789999999998432 257999999999999999999999999999998 4676677999999999999999999
Q ss_pred hhhhcccccCCCCCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhc------ceEEEEeecCCccee-eecCCCC
Q psy7350 82 EVAREGQCEGGQGRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKI------QFVLSGGLHGGALVA-SYPFDNT 154 (315)
Q Consensus 82 ~~~~~~~~~~~~~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~------~~~~~idlH~~~~~~-~~P~~~~ 154 (315)
... ..|+...|.||||-|. .+.+.+-|+..+..++++.. ++.+++|+|+.++.+ .|=|+..
T Consensus 484 ~~G--------nyRCSL~G~DLNR~w~----tps~~shPsi~~~k~li~~l~~~~~~~p~~Y~DlHgHSqK~n~FvYGnv 551 (650)
T KOG3641|consen 484 IVG--------NYRCSLMGLDLNRMWS----TPSPASHPSIYAVKQLIQQLSNVPHSRPLGYVDLHGHSQKVNHFVYGNV 551 (650)
T ss_pred ecc--------cceeccccchhhhhcC----CCCcccchhHHhHHHHHhhhhcccccCceEeecccccccccceEEecCc
Confidence 654 4688999999999974 35667888877777777653 488999999999954 4455554
Q ss_pred C
Q psy7350 155 P 155 (315)
Q Consensus 155 ~ 155 (315)
.
T Consensus 552 ~ 552 (650)
T KOG3641|consen 552 N 552 (650)
T ss_pred C
Confidence 3
No 60
>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]
Probab=99.35 E-value=5.1e-12 Score=121.02 Aligned_cols=93 Identities=27% Similarity=0.460 Sum_probs=75.8
Q ss_pred CCCCCc-eEEEEEEeCCCCCCCCCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCC-hHHHHhhcCceEEEEcCCCc
Q psy7350 1 MACTRR-DLWVMVVSASPYEHMIGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTD-PYIKWLLDNTRIHILPSMNP 78 (315)
Q Consensus 1 ~S~eGR-~i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d-~~~~~ll~~~~i~iiP~~NP 78 (315)
+|++|| ++++.+-+.+ ..+++++|++++|+| |..++..++..|+..+.++ ..++.++++..++++|.+||
T Consensus 128 ~sv~GR~~~~i~~~~~~-----~~~~~i~~~~~~H~~---g~~~~~~~~~~li~r~~~~~~~~~~lld~~~~~vvp~~Np 199 (374)
T COG2866 128 RSVEGRDDPLITFPESN-----PEHKTILITAGQHAR---GEKMVEWFLYNLILRYLDPDVQVRKLLDRADLHVVPNVNP 199 (374)
T ss_pred ccccccccceeeecCCC-----CccceeeEecccccC---ccHHHHHHHHHHHHHhcCccchhhhhhccccEEEecccCC
Confidence 589999 6665555543 368999999999996 6666666666666666544 78999999999999999999
Q ss_pred hhhhhhhcccccCCCCCCcCCCcCCCCCCCc
Q psy7350 79 DGYEVAREGQCEGGQGRYNARGFDLNRNFPD 109 (315)
Q Consensus 79 DG~~~~~~~~~~~~~~R~n~~GvDLNRnfp~ 109 (315)
||+++.+ .|.|+.|+||||+|+.
T Consensus 200 DG~~~~~--------lr~na~~~dLnr~~~~ 222 (374)
T COG2866 200 DGSDLGN--------LRTNANGVDLNRNFIA 222 (374)
T ss_pred chhhhcc--------cccccCccchhhhccC
Confidence 9999985 4889999999999964
No 61
>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.
Probab=99.27 E-value=3.5e-10 Score=106.69 Aligned_cols=100 Identities=21% Similarity=0.241 Sum_probs=70.3
Q ss_pred CCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCc
Q psy7350 22 IGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGF 101 (315)
Q Consensus 22 ~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~Gv 101 (315)
...|.|+|+||+||||..|.+++..+++.|... .+.-....++|+.||.++... .|.. ..
T Consensus 40 ~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~---------~l~~~~~v~~~~~Np~A~~~~---------~R~~--d~ 99 (322)
T cd03855 40 PATKAIVISAGVHGNETAPIEILNQLIKDLLAG---------ELPLAHRLLFIFGNPPAMRAG---------ERFV--DE 99 (322)
T ss_pred CCCCeEEEEccccCCchhHHHHHHHHHHhhhhc---------cccCCeEEEEEeeCHHHHHhC---------cccC--CC
Confidence 456899999999999999999999999998763 122223356778999999765 3433 25
Q ss_pred CCCCCCCccccCCCCCCCHHHHH-------HHHHHHhc---ceEEEEeecCC
Q psy7350 102 DLNRNFPDYFKQNNKRGQPETDA-------VKEWTSKI---QFVLSGGLHGG 143 (315)
Q Consensus 102 DLNRnfp~~~~g~~~~sepEt~a-------l~~~~~~~---~~~~~idlH~~ 143 (315)
||||.||..... .....|.+. +..++.+. ..++.||||+.
T Consensus 100 DLNR~FpG~~~~--~~~~~E~~rA~~L~~~~~~~~~~~~~~~~d~~iDLHta 149 (322)
T cd03855 100 NLNRLFSGRHQK--DEPGPERARAAELEQAVADFFAAGPSGAERWHYDLHTA 149 (322)
T ss_pred CccCCCCCCccc--CCCChHHHHHHHHHHHHHHHHhhcccccCcEEEEccCC
Confidence 999999964432 122345432 23344443 58999999995
No 62
>PRK02259 aspartoacylase; Provisional
Probab=99.24 E-value=3e-11 Score=112.33 Aligned_cols=100 Identities=26% Similarity=0.155 Sum_probs=72.4
Q ss_pred CeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCC
Q psy7350 25 PDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLN 104 (315)
Q Consensus 25 p~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLN 104 (315)
+.|+|+||+||||..|++++..+++++... ......+++|+.||.+++.. .|.. ..|||
T Consensus 3 ~~v~i~aGvHGnE~~Gv~~v~~l~~~~~~~----------~~~g~~i~~~i~Np~A~~~~---------~Ry~--~~DLN 61 (288)
T PRK02259 3 NRVAIVGGTHGNEITGIYLVKKWQQQPNLI----------NRKGLEVQTVIGNPEAIEAG---------RRYI--DRDLN 61 (288)
T ss_pred cEEEEEcCccCChhHHHHHHHHHHhccccc----------ccCccEEEEEeeCHHHHHhC---------CCCC--cccCC
Confidence 679999999999999999998888876431 12456788899999999765 4543 37999
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHhc------ceEEEEeecCCcc
Q psy7350 105 RNFPDYFKQNNKRGQPETDAVKEWTSKI------QFVLSGGLHGGAL 145 (315)
Q Consensus 105 Rnfp~~~~g~~~~sepEt~al~~~~~~~------~~~~~idlH~~~~ 145 (315)
|.||....+....+..|.+....+.... +.|+.||||+++.
T Consensus 62 R~Fpg~~~~~~~~~~~e~~~A~~l~~~~~~~~~~~~D~~iDLHttts 108 (288)
T PRK02259 62 RSFRLDLLQNPDLSGYEQLRAKELVQQLGPKGNSPCDFIIDLHSTTA 108 (288)
T ss_pred CCCCCccccCCCCCCHHHHHHHHHHHHHhhccCccCcEEEECCCCCC
Confidence 9999754432222445555444444433 6899999999765
No 63
>COG3608 Predicted deacylase [General function prediction only]
Probab=99.18 E-value=1.3e-10 Score=108.13 Aligned_cols=107 Identities=25% Similarity=0.389 Sum_probs=81.0
Q ss_pred CCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCc-CCCc
Q psy7350 23 GKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYN-ARGF 101 (315)
Q Consensus 23 ~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n-~~Gv 101 (315)
..|+++|+|++||+|..|+.++.+|++.|-.. + -..+|+|||.+||-+++.. +|.. ..+.
T Consensus 47 ~gp~~~l~ag~HGdEl~G~~al~~Li~~L~~a--------~--i~GtV~iVP~aN~~a~~~~---------~R~~p~d~~ 107 (331)
T COG3608 47 PGPSVLLQAGVHGDELPGVIALRRLIPALDPA--------D--ISGTVIIVPIANPPAFEAQ---------GRFSPGDDT 107 (331)
T ss_pred CCCEEEEEecccccccchHHHHHHHHHhcCHh--------h--cCceEEEEeccCHHHHHhh---------cccCCCCCC
Confidence 46999999999999999999999999999652 1 3579999999999999876 4443 3778
Q ss_pred CCCCCCCccccCCCCCCCHHHHHHHHHHHhc---ceEEEEeecCCcceeee-cCCCC
Q psy7350 102 DLNRNFPDYFKQNNKRGQPETDAVKEWTSKI---QFVLSGGLHGGALVASY-PFDNT 154 (315)
Q Consensus 102 DLNRnfp~~~~g~~~~sepEt~al~~~~~~~---~~~~~idlH~~~~~~~~-P~~~~ 154 (315)
|+||+||. .+. ..-|.++.++++.. ..|+.+|||+++....+ ||...
T Consensus 108 N~NR~fPg-----~~d-gs~t~ria~~l~r~L~~~aD~VlDlHsg~~~~~~~~~i~~ 158 (331)
T COG3608 108 NLNRAFPG-----RPD-GSATERIADRLKRLLLPLADIVLDLHSGGEGLDYLPYILA 158 (331)
T ss_pred cccccCCC-----CCC-CCHHHHHHHHHHHhhhcccCEEEEccCCCCcccccceecc
Confidence 99999994 221 12355566666443 48999999999986544 46433
No 64
>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases. ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.14 E-value=2.3e-10 Score=105.84 Aligned_cols=100 Identities=26% Similarity=0.182 Sum_probs=69.9
Q ss_pred CeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCC
Q psy7350 25 PDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLN 104 (315)
Q Consensus 25 p~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLN 104 (315)
++|+|+||+||||..|+.++..+++.+.. .......+++|+.||.+++.. .|.. ..|||
T Consensus 1 ~~v~I~aGvHGnE~~Gv~~v~~l~~~~~~----------~~~~~~~v~~~i~Np~A~~~~---------~Ry~--d~DLN 59 (282)
T cd06909 1 KRVAIVGGTHGNELTGVYLVKKWLQQPEL----------IQRPSLEVHPVIANPRAVEAC---------RRYI--DTDLN 59 (282)
T ss_pred CeEEEEcCccCChHHHHHHHHHHHhcccc----------cccCCeEEEEEecCHHHHHhC---------CccC--CCCCC
Confidence 46899999999999999999888887643 123345566777899999765 4543 48999
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHhc------ceEEEEeecCCcc
Q psy7350 105 RNFPDYFKQNNKRGQPETDAVKEWTSKI------QFVLSGGLHGGAL 145 (315)
Q Consensus 105 Rnfp~~~~g~~~~sepEt~al~~~~~~~------~~~~~idlH~~~~ 145 (315)
|.||....+....+.+|.+....+.+.+ +.+++||||++..
T Consensus 60 R~Fpg~~~~~~~~~~~e~~~A~~l~~~l~~~~~~~~D~~iDLHstts 106 (282)
T cd06909 60 RCFTLENLSNSELLPYEVKRAKELNQKLGPKGNSPCDFVIDLHNTTS 106 (282)
T ss_pred CCCCCCccCCCCCCCHHHHHHHHHHHHHhhccCCCceEEEECCCCCC
Confidence 9999754442222345555444444432 4899999999743
No 65
>TIGR03242 arg_catab_astE succinylglutamate desuccinylase. Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.
Probab=99.12 E-value=1.6e-09 Score=102.22 Aligned_cols=100 Identities=24% Similarity=0.236 Sum_probs=68.7
Q ss_pred CCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCc
Q psy7350 22 IGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGF 101 (315)
Q Consensus 22 ~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~Gv 101 (315)
...|.|+|+||+||||..|.+++..+++++... .+....++.++ +.||.++... .|.. ..
T Consensus 39 ~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~--------~~~~~~~l~~i-~~Np~A~~~~---------~R~~--~~ 98 (319)
T TIGR03242 39 PPQKSLVISAGIHGNETAPIEILEQLLGDIAAG--------KLPLRVRLLVI-LGNPPAMRTG---------KRYL--HD 98 (319)
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHhhhhhc--------cccCCceEEEE-EcCHHHHHhC---------cccC--CC
Confidence 456899999999999999999999999988652 12234555555 7899999764 4543 36
Q ss_pred CCCCCCCccccCCCCCCCHHHH---HHHH----HHHhc---ceEEEEeecCC
Q psy7350 102 DLNRNFPDYFKQNNKRGQPETD---AVKE----WTSKI---QFVLSGGLHGG 143 (315)
Q Consensus 102 DLNRnfp~~~~g~~~~sepEt~---al~~----~~~~~---~~~~~idlH~~ 143 (315)
||||.||...... ....|.+ .+.. ++... ..|+.||||+.
T Consensus 99 DLNR~FpG~~~~~--~~~~E~~rA~~l~~~~~~~~~~~~~~~~D~~IDLHt~ 148 (319)
T TIGR03242 99 DLNRMFGGRYQQL--APSFETCRAAELEQCVEDFFSQGGRSVARWHYDLHTA 148 (319)
T ss_pred CccCCCCCccccc--cCchHHHHHHHHHHHHHHHhccccCccceEEEECCCC
Confidence 9999999643211 1233442 2223 44443 36999999996
No 66
>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.12 E-value=2.4e-10 Score=105.47 Aligned_cols=110 Identities=21% Similarity=0.124 Sum_probs=72.2
Q ss_pred CeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCC-CCCCcCCCcCC
Q psy7350 25 PDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGG-QGRYNARGFDL 103 (315)
Q Consensus 25 p~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~-~~R~n~~GvDL 103 (315)
|+|+|+|++||||..|++++..+++.- . . .+ +.++.++ ++||-++.... +.+. ..| ..+.||
T Consensus 1 P~v~isagvHGnE~~Gi~al~~l~~~~-------~--~-~l-~G~li~~-~~N~~A~~~~~---~~~p~~~R--~~~~dL 63 (272)
T cd06910 1 PHVMINALVHGNEICGAIALDALLREG-------L--R-PR-RGRLTLA-FANVAAYARFD---PNNPTASR--FVDEDM 63 (272)
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhCc-------c--c-cc-CCCEEEE-EECHHHHHhcc---cCCCcccc--cCCCCc
Confidence 789999999999999999999999731 0 1 13 3566666 79999996531 1111 122 235799
Q ss_pred CCCCCcccc-CCCCCCCHHHHHHHHHHHhc-ceEEEEeecCCcceeeecCCCC
Q psy7350 104 NRNFPDYFK-QNNKRGQPETDAVKEWTSKI-QFVLSGGLHGGALVASYPFDNT 154 (315)
Q Consensus 104 NRnfp~~~~-g~~~~sepEt~al~~~~~~~-~~~~~idlH~~~~~~~~P~~~~ 154 (315)
||.||..+. ++. ...|.+....+..-. ..|++||||+++.. ..||...
T Consensus 64 NR~Fpg~~~~g~~--~~~e~~~A~~l~~~i~~aD~~iDLHt~~~~-~~p~~~~ 113 (272)
T cd06910 64 NRVWSPDVLDGPR--DSIELRRARELRPVIDTADYLLDLHSMQWP-SPPLILA 113 (272)
T ss_pred CCCCCCcccCCCc--ccHHHHHHHHHHHHHhhCCEEEECCCCCCC-CCCEEEe
Confidence 999996542 221 235555443333212 57899999999983 5676644
No 67
>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.08 E-value=5.2e-10 Score=105.55 Aligned_cols=95 Identities=22% Similarity=0.208 Sum_probs=69.4
Q ss_pred CeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCC
Q psy7350 25 PDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLN 104 (315)
Q Consensus 25 p~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLN 104 (315)
|.|+|+||+||||..|..++.++++++... . +... .++++.||-++... .|....|.|||
T Consensus 35 p~v~I~aGvHGNE~~Gi~al~~ll~~~~~~--------~-~~~~--~~l~i~Np~A~~~~---------~R~~~d~~DLN 94 (327)
T cd06256 35 PPLFVSTLLHGNEPTGLQAVQRLLKALEAR--------P-LPRS--LLLFIGNVAAALAG---------VRRLDGQPDYN 94 (327)
T ss_pred CeEEEEccccCCcHHHHHHHHHHHHhCChh--------h-cCCc--EEEEEeCHHHHHhC---------cccCCCCCCcc
Confidence 899999999999999999999999877541 1 3333 44557999999765 56666788999
Q ss_pred CCCCccccCCCCCCCHHH---HHHHHHHHhcceEEEEeecCCcc
Q psy7350 105 RNFPDYFKQNNKRGQPET---DAVKEWTSKIQFVLSGGLHGGAL 145 (315)
Q Consensus 105 Rnfp~~~~g~~~~sepEt---~al~~~~~~~~~~~~idlH~~~~ 145 (315)
|.||.... .+|. +.+.+.+.+...++.||||+...
T Consensus 95 R~Fpg~~~------s~e~r~A~~l~~~l~~~~~d~~IDLHstt~ 132 (327)
T cd06256 95 RCWPGPYD------DPEGRLAEEVLELLADERPEASIDIHNNTG 132 (327)
T ss_pred CCCCCCCC------CHHHHHHHHHHHHHHhcCCcEEEECCCCCC
Confidence 99985322 4454 44444444445789999998743
No 68
>PRK05324 succinylglutamate desuccinylase; Provisional
Probab=99.05 E-value=2.5e-09 Score=101.17 Aligned_cols=100 Identities=23% Similarity=0.226 Sum_probs=69.8
Q ss_pred CCCCeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCc
Q psy7350 22 IGKPDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGF 101 (315)
Q Consensus 22 ~~kp~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~Gv 101 (315)
...|.|+|+||+||||..|.+++..+++.|... .+..... +++|+.||.++... .|.. ..
T Consensus 45 ~~gp~v~IsaGvHGNE~~Gi~~l~~Ll~~l~~~--------~~~~~~~-v~~i~~Np~A~~~~---------~R~v--d~ 104 (329)
T PRK05324 45 PSTKALVLSAGIHGNETAPIELLDQLVRDLLAG--------ELPLRAR-LLVILGNPPAMRAG---------KRYL--DE 104 (329)
T ss_pred CCCCeEEEECCcccCcHHHHHHHHHHHHhhhcc--------ccccCce-EEEEecCHHHHHhC---------cccC--CC
Confidence 467899999999999999999999999988753 1112334 55558999999764 4543 46
Q ss_pred CCCCCCCccccCCCCCCCHHH---HHHHHHHHh----c--ceEEEEeecCC
Q psy7350 102 DLNRNFPDYFKQNNKRGQPET---DAVKEWTSK----I--QFVLSGGLHGG 143 (315)
Q Consensus 102 DLNRnfp~~~~g~~~~sepEt---~al~~~~~~----~--~~~~~idlH~~ 143 (315)
||||-||..+.+... .+|. +.|...+.. . ..|+.+|||+.
T Consensus 105 DLNR~FpG~~~~~~~--~~E~~rA~~L~~~i~~~~~~~~~~~D~~iDLHta 153 (329)
T PRK05324 105 DLNRLFGGRHQQFPG--SDEARRAAELEQAVEDFFAAGAERVRWHYDLHTA 153 (329)
T ss_pred CcccCCCCCcCCCCC--cHHHHHHHHHHHHHHHHhcccCccceEEEECCCC
Confidence 999999976654322 2254 333343322 1 47899999984
No 69
>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function.
Probab=99.01 E-value=3.1e-09 Score=100.48 Aligned_cols=218 Identities=19% Similarity=0.231 Sum_probs=132.6
Q ss_pred EEEEEEeCCCCCCCCCCCeEEEEccccCCC-hhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhc
Q psy7350 8 LWVMVVSASPYEHMIGKPDVKYVANMHGNE-AVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVARE 86 (315)
Q Consensus 8 i~~l~i~~~~~~~~~~kp~v~i~~~iHg~E-~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~ 86 (315)
|-++.++... .+..+++++|.||=| ..|+.+-+.+++.+.. +.+.+++.|.+|-.+||-|+.+.
T Consensus 40 ~Dva~lg~~~-----a~~lLv~~SGtHGVEGf~GSaiQ~~~L~~~~~--------~~~~~~~avllVHAlNPyGfa~~-- 104 (341)
T PF10994_consen 40 TDVAWLGPKD-----ASRLLVLTSGTHGVEGFAGSAIQIALLREDLA--------RSLPAGVAVLLVHALNPYGFAWL-- 104 (341)
T ss_pred eEEEEecCCC-----CCeEEEEEecCCcccccccHHHHHHHHHcccc--------cccCCCCeEEEEEccCcccccee--
Confidence 3455566532 455888999999999 8899999999988633 33667899999999999999877
Q ss_pred ccccCCCCCCcCCCcCCCCCCCccccCCC--------------CCC------CHHHHHHHHHHHhcceEEEEeecCCcce
Q psy7350 87 GQCEGGQGRYNARGFDLNRNFPDYFKQNN--------------KRG------QPETDAVKEWTSKIQFVLSGGLHGGALV 146 (315)
Q Consensus 87 ~~~~~~~~R~n~~GvDLNRnfp~~~~g~~--------------~~s------epEt~al~~~~~~~~~~~~idlH~~~~~ 146 (315)
.|.|.++|||||||-+ +..+. |.. +.-..++.+++.++....+-..=+.||.
T Consensus 105 -------RR~nE~NVDLNRNfld-f~~~~p~N~~Y~~l~~~l~p~~~~~~~~~~~~~~l~~~~~~~G~~a~~~av~~GQY 176 (341)
T PF10994_consen 105 -------RRVNENNVDLNRNFLD-FSQPLPANPGYEELHPLLNPSDWPPPADAAAFAALAKYIARHGFAAFKQAVSGGQY 176 (341)
T ss_pred -------eccCCcCcCcccccCc-ccCCCCCCccHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHhHHHHHHHHhCcCc
Confidence 5789999999999973 22110 111 1123556666665422222122223332
Q ss_pred ---eeecCCCCCCChhHHhhhhccCCchh----HHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCC
Q psy7350 147 ---ASYPFDNTPNSSEYLELNNKRGQPET----DAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLT 219 (315)
Q Consensus 147 ---~~~P~~~~~~~~~~~~~~~~~~~~~~----~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~ 219 (315)
--.-|+.+.. +... +-+.+++....-++.+.+|-|.. ||+...- .....
T Consensus 177 ~~P~GlfYGG~~p------------~wS~~~L~~il~~~~~~~~~v~~iDlHTGlG----p~G~~~~--------i~~~~ 232 (341)
T PF10994_consen 177 THPDGLFYGGTEP------------EWSNRTLREILREHLAGAERVAWIDLHTGLG----PYGHGEL--------ICDGP 232 (341)
T ss_pred CCCCccccCCCCc------------cHHHHHHHHHHHHHhhcCcEEEEEEeCCCCC----CCCceEE--------EecCC
Confidence 0112222211 1122 23445666666778889998744 3332110 01235
Q ss_pred CCHHHHHHHHHHHhhhCccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcc---eeEEEEeecc
Q psy7350 220 PDDDVFKHLALTYSRNHPTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYG---CMEVTLELSC 288 (315)
Q Consensus 220 pD~~~~~~la~~~a~~~~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~---~~~~t~El~~ 288 (315)
+|...++.+.+.|....-. .+. | ...-|++.|.+.++.+.... ...+++|.|+
T Consensus 233 ~~~~~~~~a~~~~g~~v~~------------~~~-g---~~~s~~~~G~~~~~~~~~~~~~~~~~~~~EfGT 288 (341)
T PF10994_consen 233 PDSAALERARRWWGPDVTS------------PYD-G---TSVSYDITGLLIDAWAELLPDAEYTPITLEFGT 288 (341)
T ss_pred CChHHHHHHHHHhCcceee------------ccC-C---CCcccccCCcHHHHHHHHcCCCceeEEEEEeCC
Confidence 6677777777766643211 111 1 23568999999999987643 5788889876
No 70
>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]
Probab=98.35 E-value=5.9e-06 Score=75.23 Aligned_cols=97 Identities=23% Similarity=0.174 Sum_probs=65.4
Q ss_pred eEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCC
Q psy7350 26 DVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNR 105 (315)
Q Consensus 26 ~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNR 105 (315)
.+.|+|||||||..+.+++-.+++.+...+.. -..+..+| +-||-..+..+ | ..-.||||
T Consensus 45 ~lvIsaGiHGNEtapvEll~kl~~~~~ag~~p--------~a~r~L~i-lgNP~Ai~~gk---------R--YieqDlNR 104 (324)
T COG2988 45 SLVISAGIHGNETAPVELLDKLQQKISAGQLP--------LAWRCLVI-LGNPPAIAAGK---------R--YIEQDLNR 104 (324)
T ss_pred ceEEEecccCCccCcHHHHHHHHhhhhhcccC--------cceeEEEE-ecCcHHHHhch---------H--HHhhhHHH
Confidence 59999999999999999999999999886321 13344444 67998876542 2 23459999
Q ss_pred CCCccccCCC---CCCCHHH-HHHHHHHHhc--ceEEEEeecC
Q psy7350 106 NFPDYFKQNN---KRGQPET-DAVKEWTSKI--QFVLSGGLHG 142 (315)
Q Consensus 106 nfp~~~~g~~---~~sepEt-~al~~~~~~~--~~~~~idlH~ 142 (315)
-|...|.... ....-|- +++..|.+.- ..++.+|||+
T Consensus 105 ~F~gr~q~~~~ne~~ra~eler~~q~ff~~~~~~vr~h~DLHt 147 (324)
T COG2988 105 MFGGRPQSFSENETLRAYELERALQDFFQQGKESVRWHLDLHT 147 (324)
T ss_pred HhCCCcccCCCCchhhhHHHHHHHHHHHhcCCCcceEEEEhhh
Confidence 9976554222 2222232 3444455443 6899999997
No 71
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=97.55 E-value=5.6e-05 Score=72.82 Aligned_cols=37 Identities=57% Similarity=0.956 Sum_probs=34.9
Q ss_pred cCCchhHHHHHHhhhccceeecccccCceeeeccCCC
Q psy7350 167 RGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDN 203 (315)
Q Consensus 167 ~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~ 203 (315)
..+||++||++|+++++|++++++|||+.+++||||+
T Consensus 150 ~~EpEt~Av~~~~~~~~f~l~~~lHsg~~~~~yPy~~ 186 (375)
T cd03863 150 PPQPETLAVMSWLKSYPFVLSANLHGGSLVVNYPFDD 186 (375)
T ss_pred CCcHHHHHHHHHHhhCCceEEEEecCCCEEEEccCcC
Confidence 4589999999999999999999999999999999975
No 72
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=97.48 E-value=0.00023 Score=61.12 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=58.3
Q ss_pred CeEEEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCC
Q psy7350 25 PDVKYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLN 104 (315)
Q Consensus 25 p~v~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLN 104 (315)
|+=+++||+||+|+--+.-++. .|... .+.+..++|+|++ .+|-.++ -|+
T Consensus 7 p~rLFvgGlHG~Egk~t~~iL~---~l~~~---------~~~~G~l~i~plv-~~~kYiS-----------------TL~ 56 (193)
T PF09892_consen 7 PKRLFVGGLHGDEGKDTSPILK---RLKPN---------DFNNGNLIIIPLV-ENSKYIS-----------------TLD 56 (193)
T ss_pred ceEEEEeeccCcchhhHHHHHH---HhCcc---------cccCceEEEEeCC-CCCCcee-----------------ecC
Confidence 8889999999999986654443 33221 3455899999944 4454333 244
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcce
Q psy7350 105 RNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALV 146 (315)
Q Consensus 105 Rnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~ 146 (315)
..| + ...+-+.+.+++.+++|++++-+|+|+..
T Consensus 57 ~~Y---Y------~s~~Gk~il~lIe~y~P~~Y~ElHsY~~~ 89 (193)
T PF09892_consen 57 PEY---Y------KSEMGKKILDLIEKYKPEFYFELHSYSKE 89 (193)
T ss_pred HHH---h------cchhhhHHHHHHHHhCCceEEEEeecCHH
Confidence 433 1 12356789999999999999999998863
No 73
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=97.36 E-value=0.00013 Score=70.16 Aligned_cols=38 Identities=42% Similarity=0.663 Sum_probs=35.4
Q ss_pred hccCCchhHHHHHHhhhccceeecccccCceeeeccCC
Q psy7350 165 NKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFD 202 (315)
Q Consensus 165 ~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd 202 (315)
.+..+||++||++|+++.+|++++++|||+.+++||||
T Consensus 144 ~~~sepEt~Av~~~~~~~~f~l~~~lH~~~~~~~yPy~ 181 (363)
T cd06245 144 SADVQPETKAIIDNLISKDFTLSVALDGGSVVATYPYD 181 (363)
T ss_pred CCCCcHHHHHHHHHHHhCCceEEEEEcCCcEEEEecCC
Confidence 45679999999999999999999999999999999994
No 74
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=97.15 E-value=0.00026 Score=68.79 Aligned_cols=38 Identities=55% Similarity=0.964 Sum_probs=35.9
Q ss_pred cCCchhHHHHHHhhhccceeecccccCceeeeccCCCC
Q psy7350 167 RGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 204 (315)
Q Consensus 167 ~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~ 204 (315)
..+||++||++|+++++|++++++|||+.+++||||++
T Consensus 170 ~sepEt~Av~~~~~~~~~~l~~s~Hs~~~~~~yP~~~t 207 (395)
T cd03867 170 KVAPETKAVMKWMRSIPFVLSASLHGGDLVVSYPYDFS 207 (395)
T ss_pred ccCHHHHHHHHHHhhCCceEEEEccCcceeEEcccccc
Confidence 36999999999999999999999999999999999875
No 75
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=97.07 E-value=0.00047 Score=66.55 Aligned_cols=39 Identities=64% Similarity=1.000 Sum_probs=36.5
Q ss_pred cCCchhHHHHHHhhhccceeecccccCceeeeccCCCCC
Q psy7350 167 RGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTP 205 (315)
Q Consensus 167 ~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~ 205 (315)
..+||++|+++|+++.+|++++++|||+.+++||||.+.
T Consensus 148 ~sepEt~al~~~~~~~~~~l~~~~H~~~~~~~YP~~~~~ 186 (376)
T cd03866 148 QRQPETRAVMEWLKSETFVLSANLHGGALVASYPYDNGN 186 (376)
T ss_pred CCcHHHHHHHHHHHhcCcEEEEEccCCceEEeccccCCC
Confidence 479999999999999999999999999999999998863
No 76
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=96.83 E-value=0.001 Score=64.14 Aligned_cols=40 Identities=53% Similarity=0.924 Sum_probs=37.3
Q ss_pred hccCCchhHHHHHHhhhccceeecccccCceeeeccCCCC
Q psy7350 165 NKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 204 (315)
Q Consensus 165 ~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~ 204 (315)
....+||++|+++|+.+.+|++++++|||+.++.||||++
T Consensus 148 ~~~sepEt~av~~~~~~~~~~l~~~lH~~~~~~~yP~~~~ 187 (372)
T cd03868 148 LSERQPETVAMMKWIRSNPFVLSGNLHGGSVVASYPYDDS 187 (372)
T ss_pred CCCCCHHHHHHHHHHhhCCcEEEEEccCccEEEecccccc
Confidence 4567999999999999999999999999999999999875
No 77
>COG4073 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.35 E-value=0.0049 Score=51.92 Aligned_cols=78 Identities=17% Similarity=0.323 Sum_probs=57.0
Q ss_pred EEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCCCC
Q psy7350 28 KYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNRNF 107 (315)
Q Consensus 28 ~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRnf 107 (315)
+++||+||+|+-.++-++. ++.|-. .+..+.|+|.+|+--|.-+ ||-.|
T Consensus 18 lfV~GlHGdEgk~te~ilr-l~~~~~------------~ng~l~Vip~v~n~~YIST------------------ldp~y 66 (198)
T COG4073 18 LFVGGLHGDEGKATEPILR-LRVLPE------------ENGVLRVIPKVENGPYIST------------------LDPSY 66 (198)
T ss_pred EEEeeccCcccchhhhhhh-hcccCc------------cCceEEEEeccCCCCceee------------------cChhh
Confidence 8999999999999988877 333322 3689999998887666322 22121
Q ss_pred CccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcc
Q psy7350 108 PDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGAL 145 (315)
Q Consensus 108 p~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~ 145 (315)
+ ..++-+.+.+.+++.+|++++.+|.|..
T Consensus 67 ---y------~s~~G~~ilr~vek~rP~vY~ElH~Yr~ 95 (198)
T COG4073 67 ---Y------RSEVGARILRVVEKLRPDVYVELHCYRP 95 (198)
T ss_pred ---c------cchhhHHHHHHHHHhCCceEEEEeecCH
Confidence 1 2245677889999999999999999765
No 78
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=96.25 E-value=0.0064 Score=56.94 Aligned_cols=43 Identities=21% Similarity=0.220 Sum_probs=36.2
Q ss_pred HhhhhccCCchhHHHHHHhhhcc--ceeecccccCceeeeccCCC
Q psy7350 161 LELNNKRGQPETDAVKEWTSKIQ--FVLSGGLHGGALVASYPFDN 203 (315)
Q Consensus 161 ~~~~~~~~~~~~~ai~~~~~~~~--f~ls~~~hgg~~~~~ypyd~ 203 (315)
+....++.+||++||.+|+.+.. +.+..++|+++.++.|||++
T Consensus 156 Y~G~~pfSEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~i~~P~g~ 200 (300)
T cd03872 156 YCGPFPESEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSY 200 (300)
T ss_pred CCCCCCCCcHHHHHHHHHHHhCCccceEEEEEccCCcEEEecCCC
Confidence 34556788999999999999763 66777999999999999975
No 79
>KOG2649|consensus
Probab=95.81 E-value=0.011 Score=57.88 Aligned_cols=142 Identities=27% Similarity=0.283 Sum_probs=92.9
Q ss_pred EEEccccCCChhHHHHHHHHHHHHHHhcCCChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCCCC
Q psy7350 28 KYVANMHGNEAVGRELMLHLIQYFVDNYNTDPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNRNF 107 (315)
Q Consensus 28 ~i~~~iHg~E~~g~~~~~~~i~~L~~~~~~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRnf 107 (315)
+.... |+|++++..+..-.|+-+.+ ++.|..-. ......+++++..|++|+++++...-..+..+... .. .++|+
T Consensus 147 Lc~~y-~~n~~i~~Lv~~trIHlmPS-mNPDGyE~-a~~~~~~~~~GR~Nang~DLNrnFPd~~~~~~~~~-~~-~~~n~ 221 (500)
T KOG2649|consen 147 LCDNY-GKDPRITQLVNNTRIHIMPS-MNPDGYEI-AKRGDRGWATGRNNANGVDLNRNFPDQFRLVYFIV-TF-DLLNS 221 (500)
T ss_pred HHHhc-CCChHHHHHHhhceEEEecc-cCcchhhh-hhcccccceecccCccccchhccCcccccceeeee-ee-ccccc
Confidence 34444 77887776665555554443 45554322 23378999999999999999876533222111100 00 12222
Q ss_pred Cc-cccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCCCChhHHhhhhccCCchhHHHHHHhh
Q psy7350 108 PD-YFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSSEYLELNNKRGQPETDAVKEWTS 180 (315)
Q Consensus 108 p~-~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~ 180 (315)
+. .+.......+|||+|+++|+.+++|++..+||++..++.|||+.++... ....+....++.+|++
T Consensus 222 ~l~~~~~~~~~~~pEt~Avm~W~~~~pFvLSAnLHGG~lvanYPfD~~~~~~------~~~s~tpDd~~F~~La 289 (500)
T KOG2649|consen 222 HLIMFNDDLNLRQPETIAVMKWLRDIPFVLSANLHGGALVANYPFDDTEDKR------KYYSASPDDATFRFLA 289 (500)
T ss_pred ccccccccccccCccHHHHHHHHhhcceeeeccccCCceEEEccccCCcccc------cccCCCCCcHHHHHHH
Confidence 21 1223356789999999999999999999999999999999999887654 2233455677776665
No 80
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=95.24 E-value=0.011 Score=55.16 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=38.8
Q ss_pred HHhhhhccCCchhHHHHHHhhhc-cceeecccccCceeeeccCCC
Q psy7350 160 YLELNNKRGQPETDAVKEWTSKI-QFVLSGGLHGGALVASYPFDN 203 (315)
Q Consensus 160 ~~~~~~~~~~~~~~ai~~~~~~~-~f~ls~~~hgg~~~~~ypyd~ 203 (315)
.+....+..+||++||.+|+.+. .|.+..++|+++.++.|||+.
T Consensus 165 ~y~G~~p~sepEt~av~~~~~~~~~~~~~l~~Hs~g~~i~~P~~~ 209 (295)
T cd03859 165 TYRGPSAFSEPETQAIRDFVESHKNIKTALNYHTYSNLWLYPYGY 209 (295)
T ss_pred CccCCCCCchHHHHHHHHHHHhCCCeEEEEEeecCCceEEeCCcC
Confidence 34445677899999999999999 899999999999999999975
No 81
>KOG2650|consensus
Probab=94.84 E-value=0.044 Score=53.49 Aligned_cols=47 Identities=26% Similarity=0.341 Sum_probs=38.1
Q ss_pred hhHHhhhhccCCchhHHHHHHhhhcc--ceeecccccCceeeeccCCCC
Q psy7350 158 SEYLELNNKRGQPETDAVKEWTSKIQ--FVLSGGLHGGALVASYPFDNT 204 (315)
Q Consensus 158 ~~~~~~~~~~~~~~~~ai~~~~~~~~--f~ls~~~hgg~~~~~ypyd~~ 204 (315)
++.+....++++||++|+.+++.+.. +..=.++|+++..+.|||+++
T Consensus 274 se~Y~G~~pfSEpEt~av~~fi~~~~~~i~~yislHSYsQ~llyPyg~~ 322 (418)
T KOG2650|consen 274 SETYAGPSPFSEPETRAVRDFITSFENNIKAYISLHSYSQLLLYPYGYT 322 (418)
T ss_pred ccccCCCCCCCcHHHHHHHHHHHhcCcceEEEEEecccceeEEeccccc
Confidence 34455778899999999999998644 344459999999999999875
No 82
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=94.82 E-value=0.022 Score=55.04 Aligned_cols=40 Identities=60% Similarity=1.027 Sum_probs=37.2
Q ss_pred hccCCchhHHHHHHhhhccceeecccccCceeeeccCCCC
Q psy7350 165 NKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 204 (315)
Q Consensus 165 ~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~ 204 (315)
.+..+||++||.+|+.++.|.+..++|+++.++.|||+++
T Consensus 149 ~~~sepEt~al~~~~~~~~~~~~i~~Hs~~~~~~yp~~~~ 188 (374)
T cd03858 149 NGPRQPETKAVMNWIKSIPFVLSANLHGGALVANYPYDDS 188 (374)
T ss_pred CcccCHHHHHHHHHHhhCCceEEEEccCCceEEEcccccC
Confidence 4568999999999999999999999999999999999875
No 83
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=94.73 E-value=0.02 Score=52.91 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=38.1
Q ss_pred HhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCCC
Q psy7350 161 LELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDN 203 (315)
Q Consensus 161 ~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~ 203 (315)
+....+..+||++||.+|+.+..+.+..++|+++.++.|||+.
T Consensus 152 y~G~~~~sEpEt~av~~~~~~~~~~~~i~~Hs~~~~i~~P~~~ 194 (272)
T cd06227 152 YSGPAPFSEPETRVLRDLLTSFSPDVFLSVHSGTLALFTPYAY 194 (272)
T ss_pred cCCCCCCCcHHHHHHHHHHHhCCCeEEEEeccCCCEEEecCCC
Confidence 3344567899999999999999999999999999999999975
No 84
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=94.59 E-value=0.027 Score=52.64 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=35.9
Q ss_pred HhhhhccCCchhHHHHHHhhhcc----------------ceeecccccCceeeeccC
Q psy7350 161 LELNNKRGQPETDAVKEWTSKIQ----------------FVLSGGLHGGALVASYPF 201 (315)
Q Consensus 161 ~~~~~~~~~~~~~ai~~~~~~~~----------------f~ls~~~hgg~~~~~ypy 201 (315)
+....+..+||++||.+|+.+.. |.+.+++|+++.++.|||
T Consensus 152 y~G~~p~SEpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~ 208 (293)
T cd06226 152 YRGPAPGSEPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPW 208 (293)
T ss_pred cCCCCCCCcHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCeEeecC
Confidence 34556788999999999999876 778889999999999998
No 85
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=94.53 E-value=0.022 Score=53.44 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=37.8
Q ss_pred HHhhhhccCCchhHHHHHHhhhc----cceeecccccCceeeeccCCC
Q psy7350 160 YLELNNKRGQPETDAVKEWTSKI----QFVLSGGLHGGALVASYPFDN 203 (315)
Q Consensus 160 ~~~~~~~~~~~~~~ai~~~~~~~----~f~ls~~~hgg~~~~~ypyd~ 203 (315)
.+....+..+||++||.+|+.+. .|.+..++|+++.++.|||+.
T Consensus 159 ~Y~G~~~~sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~i~~P~~~ 206 (304)
T cd06248 159 TYRGESPGDAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQLILYPYGY 206 (304)
T ss_pred CcCCCCCCccHHHHHHHHHHHhccccCceEEEEEeccCcceEEecCcC
Confidence 34455678899999999999986 499999999999999999963
No 86
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=94.24 E-value=0.03 Score=52.56 Aligned_cols=44 Identities=11% Similarity=0.178 Sum_probs=37.2
Q ss_pred HHhhhhccCCchhHHHHHHhhhc-cceeecccccCceeeeccCCC
Q psy7350 160 YLELNNKRGQPETDAVKEWTSKI-QFVLSGGLHGGALVASYPFDN 203 (315)
Q Consensus 160 ~~~~~~~~~~~~~~ai~~~~~~~-~f~ls~~~hgg~~~~~ypyd~ 203 (315)
.+....+..+||++||.+|+.+. .|.+..++|+++.++.|||+.
T Consensus 158 ~Y~G~~pfSEpEt~av~~~~~~~~~~~~~l~lHS~g~~i~yP~~~ 202 (301)
T cd03870 158 TYHGPYANSEVEVKSIVDFVKSHGNFKAFISIHSYSQLLLYPYGY 202 (301)
T ss_pred ccCCCCCCccHHHHHHHHHHhhCCCeEEEEEeccCCceEEecCcC
Confidence 34556678899999999999876 477888999999999999963
No 87
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=93.79 E-value=0.039 Score=51.76 Aligned_cols=43 Identities=14% Similarity=0.161 Sum_probs=35.6
Q ss_pred HHhhhhccCCchhHHHHHHhhhcccee--ecccccCceeeeccCC
Q psy7350 160 YLELNNKRGQPETDAVKEWTSKIQFVL--SGGLHGGALVASYPFD 202 (315)
Q Consensus 160 ~~~~~~~~~~~~~~ai~~~~~~~~f~l--s~~~hgg~~~~~ypyd 202 (315)
.+....+..+||++||.+|+.+..+.+ ..++|+++.++.|||+
T Consensus 158 ~Y~G~~p~SEpEt~Al~~~~~~~~~~~~~~l~~HSyg~~i~~Py~ 202 (300)
T cd03871 158 TYCGSAPESEKETKALADFIRNNLSSIKAYLTIHSYSQMLLYPYS 202 (300)
T ss_pred CcCCCCCCCCHHHHHHHHHHHhcCcceeEEEEeccCccEEEecCc
Confidence 345566789999999999999876544 4599999999999995
No 88
>smart00631 Zn_pept Zn_pept.
Probab=93.70 E-value=0.043 Score=50.75 Aligned_cols=65 Identities=28% Similarity=0.411 Sum_probs=53.3
Q ss_pred HhhhhccCCchhHHHHHHhhhc-cceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhh
Q psy7350 161 LELNNKRGQPETDAVKEWTSKI-QFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRN 235 (315)
Q Consensus 161 ~~~~~~~~~~~~~ai~~~~~~~-~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~ 235 (315)
+....+..+||++||.+++.+. .+.+..++|+++.++.|||+.+.. ..+++.+..+.|++.++.+
T Consensus 150 y~G~~~~sepEt~ai~~~~~~~~~~~~~id~Hs~~~~i~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~ 215 (277)
T smart00631 150 YAGPSPFSEPETKAVRDFIRSNRRFVLYIDLHSYSQLILYPYGYTKN----------DLPPNVDDLDAVAKALAKA 215 (277)
T ss_pred cCCCCCCCcHHHHHHHHHHHhcCCeeEEEEeccCCcEEEecCcCCCC----------CCCCCHHHHHHHHHHHHHH
Confidence 3444567899999999999999 899999999999999999988642 2556667778899988875
No 89
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=93.49 E-value=0.044 Score=51.37 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=35.9
Q ss_pred HHhhhhccCCchhHHHHHHhhhccce--eecccccCceeeeccCCC
Q psy7350 160 YLELNNKRGQPETDAVKEWTSKIQFV--LSGGLHGGALVASYPFDN 203 (315)
Q Consensus 160 ~~~~~~~~~~~~~~ai~~~~~~~~f~--ls~~~hgg~~~~~ypyd~ 203 (315)
.+....+..+||++||.+|+.++.+. ...++|+++.++.|||+.
T Consensus 158 ~y~G~~p~SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~i~~P~~~ 203 (300)
T cd06246 158 TYCGPYPESEPEVKAVASFLRRHINQIKAYISMHSYSQMILFPYSY 203 (300)
T ss_pred CcCCCCCCccHHHHHHHHHHHhCCcceeEEEEeccCCcEEEecccc
Confidence 34555678899999999999988754 455899999999999963
No 90
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=92.64 E-value=0.099 Score=50.25 Aligned_cols=56 Identities=23% Similarity=0.231 Sum_probs=44.4
Q ss_pred eecCCCCCCChhHHhhhhccCCchhHHHHHHhhhcc-ceeecccccCceeeeccCCC
Q psy7350 148 SYPFDNTPNSSEYLELNNKRGQPETDAVKEWTSKIQ-FVLSGGLHGGALVASYPFDN 203 (315)
Q Consensus 148 ~~P~~~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~~-f~ls~~~hgg~~~~~ypyd~ 203 (315)
.|||.........+....++++||++||.+|+.+++ +.+-.++|+.+.++.|||+.
T Consensus 215 Nf~~~W~~~~~~~y~G~~p~SEpEt~av~~~~~~~~~i~~~is~Hsyg~~il~P~g~ 271 (360)
T cd06905 215 NFPHDWRPEGEQYGAGPFPFSEPETRAVVEFWTDHPNINGFISYHTYSGVILRPYSD 271 (360)
T ss_pred CcCCCCCCCCCcCCCCCCCCChHHHHHHHHHHhcCCCeEEEEEecCCcCeeeeCCCC
Confidence 566666544445566778899999999999998764 55666999999999999965
No 91
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=92.34 E-value=0.084 Score=49.26 Aligned_cols=40 Identities=23% Similarity=0.324 Sum_probs=35.5
Q ss_pred hhhhccCCchhHHHHHHhhhc--cceeecccccCceeeeccC
Q psy7350 162 ELNNKRGQPETDAVKEWTSKI--QFVLSGGLHGGALVASYPF 201 (315)
Q Consensus 162 ~~~~~~~~~~~~ai~~~~~~~--~f~ls~~~hgg~~~~~ypy 201 (315)
....+..+||++||.+++.+. .|.+..++|+++.++.|||
T Consensus 154 ~G~~~~sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~i~~P~ 195 (294)
T cd03860 154 AGPSAFSEPETRAVRDFLLSLRGRIKAYLSLHSYGQLILYPW 195 (294)
T ss_pred cCCCCCchHHHHHHHHHHHhccccEEEEEEeccCCceEEcCC
Confidence 334467789999999999999 6999999999999999998
No 92
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=90.19 E-value=0.19 Score=47.15 Aligned_cols=45 Identities=16% Similarity=0.119 Sum_probs=36.6
Q ss_pred hHHhhhhccCCchhHHHHHHhhhccce--eecccccCceeeeccCCC
Q psy7350 159 EYLELNNKRGQPETDAVKEWTSKIQFV--LSGGLHGGALVASYPFDN 203 (315)
Q Consensus 159 ~~~~~~~~~~~~~~~ai~~~~~~~~f~--ls~~~hgg~~~~~ypyd~ 203 (315)
+.+....++.+||++||.+++.+.... +..++|+++.++.|||+.
T Consensus 156 ~~y~G~~pfSEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~i~~P~g~ 202 (298)
T cd06247 156 NIFCGTGPESEPETKAVARLIESKKSDILCYLTIHSYGQLILLPYGY 202 (298)
T ss_pred CCcCCCCCCCcHHHHHHHHHHHhcCcceEEEEEeccCCCeEEeCCcC
Confidence 344555678899999999999987643 467999999999999953
No 93
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=90.00 E-value=0.21 Score=45.67 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=37.1
Q ss_pred HHhhhhccCCchhHHHHHHhhhccceeecccccCceeeeccC
Q psy7350 160 YLELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPF 201 (315)
Q Consensus 160 ~~~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypy 201 (315)
.+....++.+||++||.+++.++.+.+..++|+++.++.|||
T Consensus 139 ~y~G~~p~SEpEtral~~~~~~~~~~~~i~~Hs~g~~i~~~~ 180 (255)
T cd06229 139 NYKGEQPLSEPETIALAELTRENRFRAVLAYHSQGEEIYWGY 180 (255)
T ss_pred CcCCCCCCCchhHHHHHHHHHhCCCeEEEEecCCCCeEEecC
Confidence 345556788999999999999999999999999999999987
No 94
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=89.53 E-value=1.4 Score=40.63 Aligned_cols=58 Identities=22% Similarity=0.204 Sum_probs=39.4
Q ss_pred cCCchhHHHHHHhhhccceeecccccCc-eeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhh
Q psy7350 167 RGQPETDAVKEWTSKIQFVLSGGLHGGA-LVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRN 235 (315)
Q Consensus 167 ~~~~~~~ai~~~~~~~~f~ls~~~hgg~-~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~ 235 (315)
..+||++++.+|+.+..+++..++||.. .+...|- ..++ .+.=+.+++..++...+.+
T Consensus 143 ~sqpEt~av~~~~~~w~P~~~~dlHg~~~~~~~~P~-~~p~----------np~~~~~l~~~~~~~~~~~ 201 (268)
T cd06244 143 QTQPETQAIVALIAEWNPASFLDLHGYVEGFLIEPC-TPPH----------EPNFEYDLLADHALAQAHA 201 (268)
T ss_pred ccCHHHHHHHHHHHHhCCeEEEEeCCCCCceEEcCC-CCCC----------CCCcCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999876 4444462 2222 1233446666655555543
No 95
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=89.45 E-value=0.21 Score=45.92 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=35.6
Q ss_pred hhhhccCCchhHHHHHHhhhccceeecccccCceeeeccCC
Q psy7350 162 ELNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFD 202 (315)
Q Consensus 162 ~~~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd 202 (315)
....+..+||++|+.+++++..+.+..++|+++..+.|||+
T Consensus 147 ~g~~~~sepEt~al~~~~~~~~~~~~id~H~~~~~~~~p~~ 187 (279)
T PF00246_consen 147 RGPAPFSEPETRALRNLIQDWNPDFFIDFHSGGNAILYPYG 187 (279)
T ss_dssp --SSTTTSHHHHHHHHHHHHTTEEEEEEEEESSSEEEESES
T ss_pred CCCcchhhhHHHHHHHHHhhcceeEEEeccccccceeeecc
Confidence 33445679999999999999999999999999999999995
No 96
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=88.88 E-value=0.29 Score=46.52 Aligned_cols=48 Identities=19% Similarity=0.103 Sum_probs=40.8
Q ss_pred hhHHhhhhccCCchhHHHHHHhhhcc-ceeecccccCceeeeccCCCCC
Q psy7350 158 SEYLELNNKRGQPETDAVKEWTSKIQ-FVLSGGLHGGALVASYPFDNTP 205 (315)
Q Consensus 158 ~~~~~~~~~~~~~~~~ai~~~~~~~~-f~ls~~~hgg~~~~~ypyd~~~ 205 (315)
...+....++.+||++||..++.+.. +.+-.++|+.+.++.|||+++.
T Consensus 155 se~Y~G~~pfSEPET~av~~~~~~~~~~~~yls~HSygq~il~P~g~~~ 203 (332)
T cd06228 155 SETFHGTAAFSEPETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGDDE 203 (332)
T ss_pred ccccCCCCCCccHHHHHHHHHHhccCCeEEEEEeccCCceEEecccCCc
Confidence 34455667889999999999998877 7788899999999999999874
No 97
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=86.53 E-value=0.61 Score=40.41 Aligned_cols=37 Identities=32% Similarity=0.472 Sum_probs=33.7
Q ss_pred ccCCchhHHHHHHhhhccceeecccccCceeeeccCC
Q psy7350 166 KRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFD 202 (315)
Q Consensus 166 ~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd 202 (315)
...++|++++.+++.+..+.+..++|++...+.|||+
T Consensus 78 ~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~ 114 (196)
T cd00596 78 PLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYS 114 (196)
T ss_pred CCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCC
Confidence 4578999999999999999999999999999999984
No 98
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=84.49 E-value=0.89 Score=42.06 Aligned_cols=38 Identities=16% Similarity=0.280 Sum_probs=32.3
Q ss_pred ccCCchhHHHHHHhhhc----cceeecccccC---ceeeeccCCC
Q psy7350 166 KRGQPETDAVKEWTSKI----QFVLSGGLHGG---ALVASYPFDN 203 (315)
Q Consensus 166 ~~~~~~~~ai~~~~~~~----~f~ls~~~hgg---~~~~~ypyd~ 203 (315)
+..++|++||.+|+++. .+++..++|+| +..+.|||++
T Consensus 128 ~~sEpEt~al~~~~~~~~~~~~~~~~ld~HSg~G~~~~i~~Pyg~ 172 (273)
T cd03862 128 AGMELEAQALCRFVRELLFESPFSIALDCHSGFGLVDRIWFPYAY 172 (273)
T ss_pred CCCCHHHHHHHHHHHHhcccCCeEEEEEECCCCCccCEEEcCCcC
Confidence 56899999999999875 68899999997 3678899965
No 99
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=79.52 E-value=1.8 Score=42.19 Aligned_cols=79 Identities=33% Similarity=0.524 Sum_probs=55.3
Q ss_pred CCCchhhhhhhcccccCCC--CCCcCCCcCCCCCCCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCC
Q psy7350 75 SMNPDGYEVAREGQCEGGQ--GRYNARGFDLNRNFPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFD 152 (315)
Q Consensus 75 ~~NPDG~~~~~~~~~~~~~--~R~n~~GvDLNRnfp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~ 152 (315)
..|..|++++|.....|.. .+....|.....-+|..| .+++||||+||++|+++++|++++++|+++.++.|||+
T Consensus 127 R~Na~GVDLNRNFp~~~~~~~~~~~~~g~~~~~P~~~~~---~~~~epET~Av~~~~~~~~fvls~nlHgG~~v~~YPyd 203 (392)
T cd03864 127 RNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHLPLPDNW---KSQVEPETLAVIQWMQNYNFVLSANLHGGAVVANYPYD 203 (392)
T ss_pred cccccCcccccCCCcccccchhhhccCCccccCCCcccc---ccccCHHHHHHHHHHHhcCcEEEEEccCCceeeeCCcc
Confidence 5688999988765432210 011112222111223322 46899999999999999999999999999999999999
Q ss_pred CCCC
Q psy7350 153 NTPN 156 (315)
Q Consensus 153 ~~~~ 156 (315)
++..
T Consensus 204 ~~~~ 207 (392)
T cd03864 204 KSRE 207 (392)
T ss_pred cccc
Confidence 8864
No 100
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=74.10 E-value=13 Score=33.62 Aligned_cols=28 Identities=14% Similarity=0.013 Sum_probs=25.1
Q ss_pred ccCCchhHHHHHHhhhccceeecccccC
Q psy7350 166 KRGQPETDAVKEWTSKIQFVLSGGLHGG 193 (315)
Q Consensus 166 ~~~~~~~~ai~~~~~~~~f~ls~~~hgg 193 (315)
...+||++++.+++.+..+.+...+|+.
T Consensus 103 ~~~~pEt~al~~~~~~~~p~~~iDlHe~ 130 (236)
T cd06243 103 LLNTPEAQALASVLRDYRPDVVVDAHEY 130 (236)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3468999999999999999999999987
No 101
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=72.12 E-value=21 Score=31.91 Aligned_cols=38 Identities=29% Similarity=0.138 Sum_probs=30.9
Q ss_pred cCCchhHHHHHHhhhccceeecccccCceeeeccCCCC
Q psy7350 167 RGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 204 (315)
Q Consensus 167 ~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~ 204 (315)
..+||++++.+++.+....+...+|++...+.++|+..
T Consensus 105 ~~~pEt~~~~~~~~~~~p~~~iDlH~~~~g~~~~~~~~ 142 (226)
T cd03857 105 LTQPETRAVREVFIEWKPQFFIDLHEYGFGAVSFYDPF 142 (226)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCCCCcceecCCCC
Confidence 46899999999999999999999999954556666543
No 102
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=68.16 E-value=4.7 Score=36.61 Aligned_cols=98 Identities=16% Similarity=0.164 Sum_probs=67.4
Q ss_pred ccCCchhHHHHHHhhhc-----cceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCcccc
Q psy7350 166 KRGQPETDAVKEWTSKI-----QFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMA 240 (315)
Q Consensus 166 ~~~~~~~~ai~~~~~~~-----~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~ 240 (315)
...+||++|+.+++.+. .+.+...+|+.+..+.|||...-. ...|+ .+.+ +...++.. |
T Consensus 125 ~~sepEt~a~~~~~~~~~~~~~~~~~~id~Hs~~~~i~~~~~~~~~----------~~~p~-~~~~-~~~~l~~~---~- 188 (244)
T cd06237 125 NFNQPETRAIRDYLVRLVKEGGKIVFALDFHSTWHDVFYTMPEDYK----------LQFPG-FVAD-WLKELDKR---I- 188 (244)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCEEEEEEeccCCcceEecCCCCCC----------cccch-HHHH-HHHHhcCc---C-
Confidence 56789999999998854 788889999999999999864211 11222 1112 22222211 1
Q ss_pred CCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCC
Q psy7350 241 TGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCK 290 (315)
Q Consensus 241 ~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~ 290 (315)
..|..+. .+..|+++|++.||.|...++.+||+||+..+
T Consensus 189 ---------~~Y~~~~--~~~~~~~~g~~~Dw~~~~~~~~~~T~E~g~~~ 227 (244)
T cd06237 189 ---------LDYKVNN--RSGSSPDRGVSKQYFADEHGAHAITYEVGDNT 227 (244)
T ss_pred ---------CCceecc--ccCcccCCCcHHHHHHHhCCCcEEEEecCCCC
Confidence 1455442 33557899999999999999999999998643
No 103
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=64.46 E-value=14 Score=33.22 Aligned_cols=38 Identities=24% Similarity=0.291 Sum_probs=31.7
Q ss_pred ccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCC
Q psy7350 166 KRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTP 205 (315)
Q Consensus 166 ~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~ 205 (315)
...+||++++.+++.+..+.+..++|+++.. |..+.+.
T Consensus 107 ~~s~PEtr~l~~~~~~~~pd~~iDlH~~~~~--y~~~~~~ 144 (231)
T cd06239 107 DLSQPESRLLRDVYDGFQPDFCFNLHDQRTI--YGVENTG 144 (231)
T ss_pred CCChHHHHHHHHHHHhcCCEEEEEECCCCCc--cCCCCCC
Confidence 3468999999999999999999999999877 7665544
No 104
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=58.29 E-value=12 Score=36.68 Aligned_cols=41 Identities=54% Similarity=0.916 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHhcceEEEEeecCCcceeeecCCCCCC
Q psy7350 116 KRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPN 156 (315)
Q Consensus 116 ~~sepEt~al~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~ 156 (315)
...||||+|+++|+.+++|+++.+||++..++.|||+.+..
T Consensus 175 ~~~~pEt~Avm~w~~~~~FvlsanlHgG~lva~YP~D~~~~ 215 (402)
T cd03865 175 TKLAPETKAVIHWIMDIPFVLSANLHGGDLVANYPYDETRS 215 (402)
T ss_pred cCCChHHHHHHHHHHhCCcEEEEEccCccEEEECCCCCCCC
Confidence 35789999999999999999999999999999999998754
No 105
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=50.93 E-value=18 Score=35.43 Aligned_cols=82 Identities=32% Similarity=0.502 Sum_probs=58.5
Q ss_pred CCCchhhhhhhcccc----cCCCCCC--cCCCcCCCCC--CCccccCCCCCCCHHHHHHHHHHHhcceEEEEeecCCcce
Q psy7350 75 SMNPDGYEVAREGQC----EGGQGRY--NARGFDLNRN--FPDYFKQNNKRGQPETDAVKEWTSKIQFVLSGGLHGGALV 146 (315)
Q Consensus 75 ~~NPDG~~~~~~~~~----~~~~~R~--n~~GvDLNRn--fp~~~~g~~~~sepEt~al~~~~~~~~~~~~idlH~~~~~ 146 (315)
.-|..|++++|.... .|..... ...+ ..|.. -+..+.|+.+++||||+||++|+.+++|++.+++|++..+
T Consensus 131 R~na~GVDLNRNFp~~~~~~W~~~~~~~~~~~-~~~~~~Pc~~~Y~G~~~~sEPET~Av~~~i~~~~FvLSanlHgG~lv 209 (405)
T cd03869 131 RWTEEGIDINHNFPDLNTILWEAEDKKKVPRK-VPNHHIPIPEWYLSENATVAPETRAVIAWMEKIPFVLGANLQGGELV 209 (405)
T ss_pred ccCCCCccccCCCccccccccccccccccccc-ccccCCCCccccCCCCCCCcHHHHHHHHHHHhCCceEEEEecCccEE
Confidence 347788888876542 3432110 0000 11222 2345678899999999999999999999999999999999
Q ss_pred eeecCCCCCCC
Q psy7350 147 ASYPFDNTPNS 157 (315)
Q Consensus 147 ~~~P~~~~~~~ 157 (315)
+.|||+++..+
T Consensus 210 ~~YPyd~~~~~ 220 (405)
T cd03869 210 VSYPYDMTRTP 220 (405)
T ss_pred EEcCcccccCC
Confidence 99999988653
No 106
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=46.81 E-value=17 Score=31.17 Aligned_cols=95 Identities=17% Similarity=0.150 Sum_probs=65.1
Q ss_pred hhccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCccccCCC
Q psy7350 164 NNKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMATGL 243 (315)
Q Consensus 164 ~~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~~g~ 243 (315)
.....+||++++.+++.+.++.+..++|++...+.++. + . +.||+.+...
T Consensus 81 ~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~~~~~~------------------~--~--~~la~~~g~~-------- 130 (178)
T cd06904 81 PKPGSEPESRALMDLIERFKPDVVVSFHAPLGVLDGDG------------------P--N--EPLARKFGYL-------- 130 (178)
T ss_pred CCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCeecCCC------------------c--h--hHHHHHhCCC--------
Confidence 34567889999999999989999999999865543321 1 1 5577664321
Q ss_pred CCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccCCCCCCCCchHHHHHhH
Q psy7350 244 ACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCCKFPPASELPKMWEENR 305 (315)
Q Consensus 244 ~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~~~p~~~~l~~~w~~n~ 305 (315)
. .. ..-|++.|++.||++...|+.++|+|++...- +....+..|.
T Consensus 131 -------~----~~--~~~~~~~G~~~~~a~~~~gip~it~Elg~~~~----~~~~~~~~~~ 175 (178)
T cd06904 131 -------G----FD--DLGYPTPGSLGSWAGVERNIPVITIELPYNLS----EYSHIDADLV 175 (178)
T ss_pred -------c----cc--cCCccCCCcHHHHHhhcCCCeEEEEEcCCcch----hhhhHHHHHh
Confidence 0 00 12245679999999998899999999986542 4444444443
No 107
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=38.32 E-value=1.1e+02 Score=28.07 Aligned_cols=42 Identities=29% Similarity=0.400 Sum_probs=27.5
Q ss_pred CChHHHHhhcCceEEEEcCCCchhhhhhhcc-cccCCCCCCcCCCcCC
Q psy7350 57 TDPYIKWLLDNTRIHILPSMNPDGYEVAREG-QCEGGQGRYNARGFDL 103 (315)
Q Consensus 57 ~d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~-~~~~~~~R~n~~GvDL 103 (315)
+|++..+++++.+++ .|||.-..+-. -..+...+.++.|+||
T Consensus 54 ~d~e~~~~i~~A~li-----~pDG~gvV~~ar~~~g~~~~~rv~G~Dl 96 (253)
T COG1922 54 KDPEFREILNQADLI-----LPDGIGVVRAARRLLGQPLPERVAGTDL 96 (253)
T ss_pred cCHHHHHHHhhcCEE-----ccCchhHHHHHHHHhCccCcccCChHHH
Confidence 689999999988854 58998766432 1122233446778776
No 108
>PHA00425 DNA packaging protein, small subunit
Probab=33.16 E-value=70 Score=23.87 Aligned_cols=36 Identities=22% Similarity=0.431 Sum_probs=30.0
Q ss_pred hHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhC
Q psy7350 172 TDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNH 236 (315)
Q Consensus 172 ~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~ 236 (315)
-.||.+.+.++.|++| ...||+++.-.||...+.-+
T Consensus 36 YnAIgKlL~RHkF~is-----------------------------Kl~pD~~iLg~la~~l~ey~ 71 (88)
T PHA00425 36 YNAIGKLLDRHKFQIS-----------------------------KLQPDENILGGLAAALEEYK 71 (88)
T ss_pred HHHHHHHHHHhccccc-----------------------------ccCCcHHHHHHHHHHHHHHH
Confidence 4689999999999883 35899999999999887644
No 109
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=32.70 E-value=35 Score=31.41 Aligned_cols=107 Identities=13% Similarity=0.173 Sum_probs=67.3
Q ss_pred hccCCchhHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhCccccCCCC
Q psy7350 165 NKRGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNHPTMATGLA 244 (315)
Q Consensus 165 ~~~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~~~m~~g~~ 244 (315)
.+..+||+++|.+++.+..+.+..++||.+.. ||..... .+ .+....+-++.|++.++.+.........
T Consensus 132 ~~~s~PEt~av~~~~~~~~~~~~ld~Hs~~~~---py~f~~g-------~~-~~p~~~~~l~~l~~~~~~al~~~~~~f~ 200 (263)
T cd06234 132 SAERSPEVFAVRQRMEETGVDFFLDVHGDEAL---PYNFIAG-------SE-GVPGWTPRLAALEARFKAALLRASPDFQ 200 (263)
T ss_pred CCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCC---CccEecc-------CC-CCCCccHHHHHHHHHHHHHHHHhCcccc
Confidence 35678999999999999999999999998765 6655321 11 1122234566676666654222111001
Q ss_pred CCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeeccC
Q psy7350 245 CKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELSCC 289 (315)
Q Consensus 245 ~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~~~ 289 (315)
+. .+|. ..+.-++..|.+.||.+...+|+++|+||.-.
T Consensus 201 ~~---~~y~----~~~~g~~~~~~a~~~~~~~~~~~s~TlEmpf~ 238 (263)
T cd06234 201 TE---HGYP----KDAPGQANLTIATNWVAHRFDCLSMTLEMPFK 238 (263)
T ss_pred cc---cccC----CCCCCchhHHHHHHHHHhhcCceEEEEEeecC
Confidence 10 1121 11122456688999999999999999999743
No 110
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=32.46 E-value=34 Score=31.41 Aligned_cols=104 Identities=18% Similarity=0.121 Sum_probs=64.5
Q ss_pred hhccCCchhHHHHHHhhhc------cceeecccccCceee-eccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhC
Q psy7350 164 NNKRGQPETDAVKEWTSKI------QFVLSGGLHGGALVA-SYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNH 236 (315)
Q Consensus 164 ~~~~~~~~~~ai~~~~~~~------~f~ls~~~hgg~~~~-~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~ 236 (315)
..+..+||+.++.+++.+. +..+-..+||.+... .|||+.... ..++.+..+.+.+.++...
T Consensus 118 p~~~~~PEv~av~~~i~~~~~~~~~~i~~~lD~H~hs~~~~~F~yG~~~~-----------~~~~~~~~~~fp~~l~~~~ 186 (261)
T cd06908 118 PSPWAHPTLHAVKNLLKELDNDSTTQLDFYIDLHAHSSLMNCFIYGNTYD-----------DVYRYERQLVFPKLLAQNA 186 (261)
T ss_pred CCcccChHHHHHHHHHHHhhhccccCeeEEEEeeccccccceeeccccCC-----------ccccHHHHHHHHHHHHHhC
Confidence 3456789999999999864 566777999998877 789877521 2344444444555555443
Q ss_pred ccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcce--eEEEEeeccCCC
Q psy7350 237 PTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGC--MEVTLELSCCKF 291 (315)
Q Consensus 237 ~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~--~~~t~El~~~~~ 291 (315)
+.+.. ..|.-..+.-+. |+.-=|.+...+| .+||+|++-+.+
T Consensus 187 ~~F~~-~~~~f~~~~~k~------------gtar~~~~~~~~~~~~s~TlE~sf~g~ 230 (261)
T cd06908 187 EDFSM-EHTMFNRDAVKA------------GTGRRFLGSLLSDNVNCYTLEVSFYGY 230 (261)
T ss_pred HHhcc-cCCcccCCCCCC------------ChHHHHHHHHhCCCceEEEEeecCCcc
Confidence 33322 123211122222 4444478888887 999999985443
No 111
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=31.40 E-value=34 Score=31.45 Aligned_cols=37 Identities=27% Similarity=0.139 Sum_probs=31.3
Q ss_pred cCCchhHHHHHHhhhccceeecccccCceeeeccCCCC
Q psy7350 167 RGQPETDAVKEWTSKIQFVLSGGLHGGALVASYPFDNT 204 (315)
Q Consensus 167 ~~~~~~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~ 204 (315)
..+||++|+.+++.+..+.+...+|+... +.|+||..
T Consensus 135 ~~~pEtra~~~~~~~~~p~~~iD~H~~~g-~~~~yd~t 171 (266)
T cd06241 135 LDAPEMRAFAKLFNKWNPDLFIDNHVTDG-ADYQYDLT 171 (266)
T ss_pred cCCHHHHHHHHHHHHhCCCEEEEeccCCC-cCceeeec
Confidence 45899999999999999999999997654 48888774
No 112
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=29.75 E-value=38 Score=31.25 Aligned_cols=101 Identities=13% Similarity=0.040 Sum_probs=65.0
Q ss_pred ccCCchhHHHHHHhhhccceeecccccCc---eeeeccCCCCCCCcccccCCCCCCCC-CHHHHHHHHHHHhhhCccccC
Q psy7350 166 KRGQPETDAVKEWTSKIQFVLSGGLHGGA---LVASYPFDNTPNSMFQSYSSAPSLTP-DDDVFKHLALTYSRNHPTMAT 241 (315)
Q Consensus 166 ~~~~~~~~ai~~~~~~~~f~ls~~~hgg~---~~~~ypyd~~~~~~~~~~~~~~~~~p-D~~~~~~la~~~a~~~~~m~~ 241 (315)
...+||++++.+|+.+..+++...+|+.+ ....+|..... + .+...| ..+....+++..+++--. .
T Consensus 149 ~~s~pEtra~~~~~~~~~p~~~~D~H~~g~~~~~~~~P~~~~~------~--np~~~p~~~~~~~~~g~~~~~al~~--~ 218 (271)
T cd06238 149 PLTQPESRGRLAAYHEWRPNVVVDFHEMGTNSTYFFAPGAPPR------T--NPLTPDQNRDLTATIGRNHAKAFDE--I 218 (271)
T ss_pred cccCHHHHHHHHHHHhcCCeEEEEeccCCCccceEEeCCCCcc------C--CCCCCHHHHHHHHHHHHHHHHHHHh--c
Confidence 56799999999999999999999999844 33344421110 0 011222 346666677666553211 0
Q ss_pred CCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcceeEEEEeec
Q psy7350 242 GLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGCMEVTLELS 287 (315)
Q Consensus 242 g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~~~~t~El~ 287 (315)
| ..|..|.. -..||+..|++-+|. .|.+.+|+|.+
T Consensus 219 G-------~~Y~t~~~-~d~~ypg~g~s~~~~---~g~ig~l~E~~ 253 (271)
T cd06238 219 G-------WLYFTREV-FDDFYPGYGSTYPDL---NGAIGMLYEQA 253 (271)
T ss_pred C-------CcEEeccc-ccccccCcCcchhhh---cCceeEEEEec
Confidence 1 13544433 348999999988875 46888999996
No 113
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=28.70 E-value=1.5e+02 Score=27.88 Aligned_cols=43 Identities=16% Similarity=0.177 Sum_probs=31.4
Q ss_pred hhhhccCCchhHHHHHHhhhc----cceeecccccCceeee-ccCCCC
Q psy7350 162 ELNNKRGQPETDAVKEWTSKI----QFVLSGGLHGGALVAS-YPFDNT 204 (315)
Q Consensus 162 ~~~~~~~~~~~~ai~~~~~~~----~f~ls~~~hgg~~~~~-ypyd~~ 204 (315)
.......+||+.|+.+.+... ++.+-..+||.+...+ |.|+..
T Consensus 141 ~~p~~~~~Pei~aik~~i~~~~~~~~i~~yiDlH~hs~~~~~F~Yg~~ 188 (304)
T cd06236 141 LNPDPELHPSIYAIKKLILYLHEESRLAFYIDLHAHASKRGCFIYGNA 188 (304)
T ss_pred CCCCcccCHHHHHHHHHHHHhhccCCceEEEEecccccccceEeeecC
Confidence 334456789999998887753 4777779999877766 777654
No 114
>KOG3641|consensus
Probab=28.33 E-value=26 Score=35.61 Aligned_cols=38 Identities=29% Similarity=0.422 Sum_probs=24.4
Q ss_pred ChHHHHhhcCceEEEEcCCCchhhhhhhcccccCCCCCCcCCCcCCCCCC
Q psy7350 58 DPYIKWLLDNTRIHILPSMNPDGYEVAREGQCEGGQGRYNARGFDLNRNF 107 (315)
Q Consensus 58 d~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~~R~n~~GvDLNRnf 107 (315)
|+....+++ + .++||++||||+..... |..+|..||.+
T Consensus 153 de~~~~l~~-~-~v~Vp~l~P~~~~~~~~----------~trsV~e~~~~ 190 (650)
T KOG3641|consen 153 DERNQTLRR-L-FVFVPMLNPDGVVRGHY----------NTRSVNENRQY 190 (650)
T ss_pred chhhhhHhh-h-eeeeeccCCcEEEEEee----------eccccccccce
Confidence 444444554 3 33499999999976532 34788888843
No 115
>PF11123 DNA_Packaging_2: DNA packaging protein ; InterPro: IPR024345 This entry represents Gp18 (gene 18 product), also known as DNA maturase A, from T7-like bacteriophages. In Bacteriophage T3, this protein is required for DNA packaging and functions in a complex with Gp19 [].
Probab=25.05 E-value=1e+02 Score=22.74 Aligned_cols=35 Identities=23% Similarity=0.454 Sum_probs=29.0
Q ss_pred hHHHHHHhhhccceeecccccCceeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhh
Q psy7350 172 TDAVKEWTSKIQFVLSGGLHGGALVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRN 235 (315)
Q Consensus 172 ~~ai~~~~~~~~f~ls~~~hgg~~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~ 235 (315)
-.||.+++.++.|.+| ...||....-.||......
T Consensus 34 YnAI~k~L~RHkF~is-----------------------------kl~pd~~~LG~L~~aL~ey 68 (82)
T PF11123_consen 34 YNAIGKLLDRHKFQIS-----------------------------KLQPDENILGELAAALEEY 68 (82)
T ss_pred HHHHHHHHHHccchhh-----------------------------hcCccHHHHHHHHHHHHHH
Confidence 4689999999999883 3579999999999887653
No 116
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=25.04 E-value=66 Score=29.58 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=69.6
Q ss_pred hccCCchhHHHHHHhhhc-----cceeecccccCc---eeeeccCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHhhhC
Q psy7350 165 NKRGQPETDAVKEWTSKI-----QFVLSGGLHGGA---LVASYPFDNTPNSMFQSYSSAPSLTPDDDVFKHLALTYSRNH 236 (315)
Q Consensus 165 ~~~~~~~~~ai~~~~~~~-----~f~ls~~~hgg~---~~~~ypyd~~~~~~~~~~~~~~~~~pD~~~~~~la~~~a~~~ 236 (315)
....+||+.++.+++.+. ++++-.++||.+ .+..|.+... .+++....+.+++..+...
T Consensus 129 ~~~~~pE~~~~~~~~~~~~~~~~~~~~~idlH~~~~~~~~f~yG~~~~-------------~~~~~~~~~~~~~~~~~~~ 195 (269)
T cd03856 129 SPDLHPEIYLVKGLMLYLAAGKRGVLFYCDFHGHSRKKNVFMYGCSFK-------------DEVWDQGYRIIPKMLSQNA 195 (269)
T ss_pred CCCCCCCHHHHHHHHHHHHhccCCceEEEEecCCCccCceEeecCCCc-------------hhhhhhHHHHHHHHHHhhC
Confidence 456799999999999887 788888999988 4444444322 2333333444555443332
Q ss_pred ccccCCCCCCCCCCCCCCCccccceEEeCCCCcccchhhhcce-eEEEEeeccC
Q psy7350 237 PTMATGLACKSNTPAFKQGITNGAQWYPLTGGMQDFNYVWYGC-MEVTLELSCC 289 (315)
Q Consensus 237 ~~m~~g~~~~~~~~~~~~g~~~~~~~Y~~~G~~~Dw~Y~~~~~-~~~t~El~~~ 289 (315)
+.+. -..| .|..|. +...|+++|++.||.|...|+ ++||+|++-+
T Consensus 196 ~~~~-~~~~-----~f~~~~--~~~~~~~~gtsr~~~~~~~~i~~syTlE~~~~ 241 (269)
T cd03856 196 PLFC-MFGC-----SFKVEK--SKASDPDRGTGRVVVAKQIKVQHSYTMEVTFN 241 (269)
T ss_pred hhhh-hcCC-----CcCCCc--CCcccCCCChHHHHHHHhcCCcEEEEEecCCC
Confidence 2222 1123 455443 335789999999999999998 9999999854
No 117
>PF04219 DUF413: Protein of unknown function, DUF; InterPro: IPR007335 This is a family of uncharacterised proteins.
Probab=24.87 E-value=69 Score=24.65 Aligned_cols=25 Identities=20% Similarity=0.472 Sum_probs=20.9
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHH
Q psy7350 104 NRNFPDYFKQNNKRGQPETDAVKEW 128 (315)
Q Consensus 104 NRnfp~~~~g~~~~sepEt~al~~~ 128 (315)
|.|||..|.-...|+-.|++.|-++
T Consensus 5 ~~~fPrGF~RsGdFTi~Ea~lLe~~ 29 (93)
T PF04219_consen 5 DKNFPRGFSRSGDFTIKEAQLLEQY 29 (93)
T ss_pred CCCCCCccccCCcccHHHHHHHHHH
Confidence 6799999998888999998877654
No 118
>PRK11027 hypothetical protein; Provisional
Probab=21.92 E-value=85 Score=25.02 Aligned_cols=25 Identities=16% Similarity=0.429 Sum_probs=20.7
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHH
Q psy7350 104 NRNFPDYFKQNNKRGQPETDAVKEW 128 (315)
Q Consensus 104 NRnfp~~~~g~~~~sepEt~al~~~ 128 (315)
|.|||.+|.....|+-.|++.|.++
T Consensus 14 ~knfPrGF~RsGdFTi~Ea~lLe~y 38 (112)
T PRK11027 14 DKNYPRGFSRSGDFTIKEAQLLERY 38 (112)
T ss_pred CCCCCCCcccCCCcCHHHHHHHHHH
Confidence 6799999988888999998877553
No 119
>PF13220 DUF4028: Protein of unknown function (DUF4028)
Probab=21.03 E-value=32 Score=23.59 Aligned_cols=29 Identities=41% Similarity=0.511 Sum_probs=21.2
Q ss_pred EEEEeeccCCCCCCCCchHHHHHhHHHHhhcc
Q psy7350 281 EVTLELSCCKFPPASELPKMWEENRLRFDRGN 312 (315)
Q Consensus 281 ~~t~El~~~~~p~~~~l~~~w~~n~~~ll~~~ 312 (315)
+=.-||+. |...++..-|.+||++++.-+
T Consensus 34 en~eelgr---ptfkevekdwkenresf~ypn 62 (65)
T PF13220_consen 34 ENNEELGR---PTFKEVEKDWKENRESFMYPN 62 (65)
T ss_pred cchhhhCC---CcHHHHHHHHHHhhhhhccCC
Confidence 33345654 677888899999999987643
Done!