BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7351
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8HXW6|PPT1_MACFA Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1
PE=2 SV=1
Length = 306
Score = 307 bits (787), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 176/244 (72%)
Query: 1 MWHGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLAC 60
+WHGMGDSCCNP S+G K +E+++P +Y+ SL IG +ED+EN FF+N+N QVT C
Sbjct: 37 IWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVC 96
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPT 120
+ + +DP+L+ GYNA+G SQGG FLRAVAQRCPSPPM+NLIS+GG QGV+GLP C +
Sbjct: 97 QTLAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMINLISVGGQHQGVFGLPRCPGES 156
Query: 121 HEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNYS 180
ICD++R+ LN GAY +Q R VQAEYWHDP+ E Y+ S+FLADIN E IN +Y
Sbjct: 157 SHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQERGINESYK 216
Query: 181 DNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIGSPESQE 240
NL L+K V+VKF D++V P DSEWFGFY GQA +PLQ+T LY + +G E
Sbjct: 217 KNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDN 276
Query: 241 VGQV 244
GQ+
Sbjct: 277 AGQL 280
>sp|P50897|PPT1_HUMAN Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1
Length = 306
Score = 307 bits (786), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 176/244 (72%)
Query: 1 MWHGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLAC 60
+WHGMGDSCCNP S+G K +E+++P +Y+ SL IG +ED+EN FF+N+N QVT C
Sbjct: 37 IWHGMGDSCCNPLSMGAIKKMVEKKIPGIYVLSLEIGKTLMEDVENSFFLNVNSQVTTVC 96
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPT 120
+ + +DP+L+ GYNA+G SQGG FLRAVAQRCPSPPM+NLIS+GG QGV+GLP C +
Sbjct: 97 QALAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMINLISVGGQHQGVFGLPRCPGES 156
Query: 121 HEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNYS 180
ICD++R+ LN GAY +Q R VQAEYWHDP+ E Y+ S+FLADIN E IN +Y
Sbjct: 157 SHICDFIRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQERGINESYK 216
Query: 181 DNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIGSPESQE 240
NL L+K V+VKF D++V P DSEWFGFY GQA +PLQ+T LY + +G E
Sbjct: 217 KNLMALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDN 276
Query: 241 VGQV 244
GQ+
Sbjct: 277 AGQL 280
>sp|P45479|PPT1_RAT Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1
SV=1
Length = 306
Score = 304 bits (779), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 134/244 (54%), Positives = 180/244 (73%)
Query: 1 MWHGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLAC 60
+WHGMGDSCCNP S+G K +E+++P +Y+ SL IG N +ED+EN FF+N+N QV +AC
Sbjct: 37 IWHGMGDSCCNPMSMGSIKKMVEKEIPGIYVLSLEIGKNMVEDVENSFFLNVNLQVGMAC 96
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPT 120
+++ +DP+L+ GYNA+G SQGG FLRAVAQRCP+PPM+ LIS+GG QGV+GLP C +
Sbjct: 97 QILEKDPKLQHGYNAIGFSQGGQFLRAVAQRCPTPPMMTLISVGGQHQGVFGLPRCPGES 156
Query: 121 HEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNYS 180
ICD++R+ LN GAY +Q R VQA+YWHDP+ E Y+ S+FLADIN E IN +Y
Sbjct: 157 SHICDFIRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQERHINESYK 216
Query: 181 DNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIGSPESQE 240
+NL L+K V+VKF D++V P DSEWFGFY GQA +PLQ+T LY E +G + +
Sbjct: 217 ENLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQETTLYTEDRLGLKKMDK 276
Query: 241 VGQV 244
G++
Sbjct: 277 AGKL 280
>sp|P45478|PPT1_BOVIN Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1
Length = 306
Score = 303 bits (777), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 135/244 (55%), Positives = 176/244 (72%)
Query: 1 MWHGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLAC 60
+WHGMGDSCCNP S+G K +E+++P +++ SL IG ED+EN FF+N+N QVT C
Sbjct: 37 IWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVC 96
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPT 120
+++ +DP+L+ GYNA+G SQGG FLRAVAQRCPSPPM+NLIS+GG QGV+GLP C +
Sbjct: 97 QILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVFGLPRCPGES 156
Query: 121 HEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNYS 180
ICD++R+ LN GAY IQ R VQAEYWHDP+ E Y+ S+FLADIN E +N +Y
Sbjct: 157 SHICDFIRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQERGVNESYK 216
Query: 181 DNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIGSPESQE 240
NL L+K V+VKF DT+V P DSEWFGFY GQA +PLQ++ LY + +G +
Sbjct: 217 KNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQDRLGLKAMDK 276
Query: 241 VGQV 244
GQ+
Sbjct: 277 AGQL 280
>sp|O88531|PPT1_MOUSE Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2
Length = 306
Score = 300 bits (767), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 131/244 (53%), Positives = 179/244 (73%)
Query: 1 MWHGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLAC 60
+WHGMGDSCCNP S+G K +E+++P +Y+ SL IG N +ED+EN FF+N+N QV + C
Sbjct: 37 IWHGMGDSCCNPMSMGVIKKMVEKEIPGIYVLSLEIGKNMMEDVENSFFLNVNVQVNMVC 96
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPT 120
+++ +DP+L+ GYNA+G SQGG FLRAVAQRCP+PPM+ LIS+GG QGV+GLP C +
Sbjct: 97 QILEKDPKLQQGYNAIGFSQGGQFLRAVAQRCPTPPMMTLISVGGQHQGVFGLPRCPGES 156
Query: 121 HEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNYS 180
ICD++R+ LN GAY +Q R VQA+YWHDP+ E+ Y+ S+FLADIN E +N +Y
Sbjct: 157 SHICDFIRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQERCVNESYK 216
Query: 181 DNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIGSPESQE 240
NL L+K V+VKF D++V P DSEWFGFY GQA +PLQ++ LY E +G + +
Sbjct: 217 KNLMALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQESTLYTEDRLGLKKMDK 276
Query: 241 VGQV 244
G++
Sbjct: 277 AGKL 280
>sp|Q20390|PPT1_CAEEL Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1
PE=2 SV=2
Length = 298
Score = 274 bits (701), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/250 (53%), Positives = 173/250 (69%), Gaps = 1/250 (0%)
Query: 1 MWHGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLAC 60
MWHGMGD CCNP S+G K EEQ+P VY+ SL++G++ +DIE+GF+ N N+ V +AC
Sbjct: 29 MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 88
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPT 120
I DPELK GYNA+G SQG FLRAVAQRCP+PPM NL+S+GG QGV+G P+C+
Sbjct: 89 IKIKNDPELKNGYNAIGFSQGAQFLRAVAQRCPNPPMKNLVSVGGQHQGVFGAPYCI-GD 147
Query: 121 HEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNYS 180
+ +C+ +RR++++GAY ++Q R VQA+YWHDP Y+ S+FLADINNE N Y
Sbjct: 148 NIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNENNNNPTYK 207
Query: 181 DNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIGSPESQE 240
NL L+ LVLVKF +D MV PKDS WFGFY G T+LP+ +T LY E IG + E
Sbjct: 208 RNLLSLKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHE 267
Query: 241 VGQVESDSAD 250
G++ D
Sbjct: 268 SGRIHFMDVD 277
>sp|Q9W3C7|PPT1_DROME Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1
PE=1 SV=2
Length = 314
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 164/239 (68%)
Query: 1 MWHGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLAC 60
+WHGMGD+CC PFSLG + EQ Y++SL+IG N + D ++GFF++ N+QV C
Sbjct: 45 LWHGMGDTCCVPFSLGAIMNLIVEQTKGGYVRSLQIGGNVLIDWQSGFFIHPNEQVDYVC 104
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPT 120
K + +D L GY+A+G SQGG FLRAVA+RCP+PPM NLI+LGG QG++GLP C T
Sbjct: 105 KQLLQDEHLAKGYHAIGFSQGGQFLRAVAERCPNPPMRNLITLGGQHQGIFGLPMCPTLT 164
Query: 121 HEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNYS 180
+ CDY+ R+L+ AY +Q VQA YWHDP+ E Y+ GS FLADINNEL IN Y
Sbjct: 165 EKPCDYITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNELFINKFYI 224
Query: 181 DNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIGSPESQ 239
+NL +L+K V+V+F DT+VQPK+S+WF +Y GQ + P ++K+Y ++ + Q
Sbjct: 225 ENLQKLKKFVMVQFLNDTIVQPKESQWFQYYTTGQNKVIQPFTESKVYQDLGLDKMHRQ 283
>sp|Q54CM0|PPT3_DICDI Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum
GN=ppt3 PE=3 SV=1
Length = 289
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 121/222 (54%), Gaps = 11/222 (4%)
Query: 14 SLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLACKLIGEDPELKMGY 73
S+ ++EE +P +Y+ ++ IGN + + I F ++ Q+ +++ DP+L G+
Sbjct: 36 SMEPLKSWIEESIPDIYVLNVEIGNGAFDSI----FTTMDSQIEEFAQVVQADPKLANGF 91
Query: 74 NALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPTHEICDYLRRVLNV 133
N +G SQG L RA QR +P + N IS GPQ G +G P P ++ +VL
Sbjct: 92 NLIGFSQGTLIARAFVQRYNNPQVYNYISWNGPQGGQFGTPFVNIP------WVDKVLGT 145
Query: 134 GAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQI-NTNYSDNLNRLRKLVLV 192
Y IQ + AEYW DP Y S+FLADINNE Q+ NT Y +NL +L +VL
Sbjct: 146 IPYEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNEYQVKNTTYKENLTKLNAMVLT 205
Query: 193 KFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIG 234
T D + PK+S WF FYA G + V+PLQ+ Y E +G
Sbjct: 206 YSTNDKTIIPKESGWFSFYADGSGTEVVPLQQQTQYSEDWLG 247
>sp|O59747|PDF1_SCHPO Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase
fusion 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pdf1 PE=1 SV=2
Length = 622
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 128/213 (60%), Gaps = 8/213 (3%)
Query: 1 MWHGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRIGNNSIEDIENGFFMNINDQVTLAC 60
+WHG+GD+ + F+L S+ ++ ++ + ++R+G+N EDI+ G+ + DQ+ C
Sbjct: 49 IWHGLGDTPTS-FTLTEVSQRVQ-KLTKGAVYAIRVGDNEFEDIKAGYLGKLEDQLDEVC 106
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPT 120
LIG + L G+ ALG+SQGGLFLRA+AQ C + + +LI+LG P G+ +P C PT
Sbjct: 107 DLIGNEDSLSNGFYALGLSQGGLFLRALAQTCDAAKIRSLITLGSPHSGINTIPGC-SPT 165
Query: 121 HEICD-YLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNY 179
+ IC + +L +G + SWIQ VQA+Y+ Y + FL +NNE+ ++ NY
Sbjct: 166 NLICKAVVHSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNEV-LHDNY 224
Query: 180 SDNLNRLRK---LVLVKFTEDTMVQPKDSEWFG 209
+ N+ +L++ LV V F D +V+P S FG
Sbjct: 225 TRNIEKLKELDNLVAVSFERDDIVEPPYSTGFG 257
>sp|Q1JQA0|PPT2_BOVIN Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 PE=2 SV=1
Length = 305
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 31/242 (12%)
Query: 3 HGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRI--GNNSIEDI---ENGFFMNINDQVT 57
HG+ DS +S H +++ E P + L + G S+ + GF + +
Sbjct: 46 HGLFDSS---YSFRHLLEYINETHPGTAVTVLDLFDGRESLRPLWEQVQGFREAVAPIMA 102
Query: 58 LACKLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPH-- 115
A + G + + SQGGL RA+ + + ISL PQ G YG +
Sbjct: 103 KALQ----------GVHLICYSQGGLVCRALLSVMDEHNVDSFISLSSPQMGQYGDTNYL 152
Query: 116 -CLYPTHEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQ 174
L+PT +R L Y W Q F YWHDP ++ Y S FLA IN E
Sbjct: 153 KWLFPTS-----MRSNLYRICYSPWGQ-EFSICNYWHDPHHDDLYLNASSFLALINGERD 206
Query: 175 I--NTNYSDNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVN 232
T + N RL +LVL+ +D ++ P S +FGFY + TVL ++K +Y+ +
Sbjct: 207 HPNATAWRKNFLRLGRLVLIGGPDDGVITPWQSSFFGFYDANE--TVLEMEKQLVYLRDS 264
Query: 233 IG 234
G
Sbjct: 265 FG 266
>sp|O70489|PPT2_RAT Lysosomal thioesterase PPT2 OS=Rattus norvegicus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 3 HGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRI--GNNSIEDIENGFFMNINDQVTLAC 60
HG+ DS +S H ++ E P + L + G S+ + + +
Sbjct: 43 HGLFDSS---YSFRHLLDYINETHPGTVVTVLDLFDGRESLRPL----WEQVQGFREAVV 95
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYG---LPHCL 117
++ + PE G + + SQGGL RA+ + + ISL PQ G YG L
Sbjct: 96 PIMEKAPE---GVHLICYSQGGLVCRALLSVMDEHNVDSFISLSSPQMGQYGDTDYLKWL 152
Query: 118 YPTHEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQI-- 175
+PT +R L Y W Q F YWHDP ++ Y S FLA IN E
Sbjct: 153 FPTS-----MRSNLYRICYSPWGQ-EFSICNYWHDPHHDDLYLNASSFLALINGERDHPN 206
Query: 176 NTNYSDNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIG 234
T + N R+ +LVL+ +D ++ P S +FGFY + TVL +++ +Y+ + G
Sbjct: 207 ATAWRKNFLRVGRLVLIGGPDDGVITPWQSSFFGFYDANE--TVLEMEEQPVYLRDSFG 263
>sp|Q9VKH6|PPT2_DROME Lysosomal thioesterase PPT2 homolog OS=Drosophila melanogaster
GN=Ppt2 PE=2 SV=1
Length = 288
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 89/196 (45%), Gaps = 16/196 (8%)
Query: 54 DQVTLACKLIGE-DPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYG 112
DQV +G+ PE G LG SQGGL RA Q P + ISL PQ G YG
Sbjct: 75 DQVRDYLNEVGKLHPE---GIIVLGYSQGGLLARAAIQSLPEHNVKTFISLSSPQAGQYG 131
Query: 113 LP--HCLYPTHEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADIN 170
H ++P L ++S + YW+DP + Y S FL IN
Sbjct: 132 TSFLHLIFPD------LAAKTAFELFYSRVGQHTSVGGYWNDPQRQDLYLKYSEFLPLIN 185
Query: 171 NELQI--NTNYSDNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLY 228
NE + +T++ + RL KLV++ D ++ P S FG++ + V+P + ++
Sbjct: 186 NEKKTSNSTSFKMGMVRLNKLVMIGGPNDDVITPWQSSHFGYF--DENMDVIPFIRRPIF 243
Query: 229 IEVNIGSPESQEVGQV 244
+IG QE G++
Sbjct: 244 TSDSIGIRTLQEAGKL 259
>sp|Q9UMR5|PPT2_HUMAN Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=4
Length = 302
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 3 HGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRI--GNNSIEDIENGFFMNINDQVTLAC 60
HG+ DS +S H +++ E P + L + G S+ + + +
Sbjct: 43 HGLFDSS---YSFRHLLEYINETHPGTVVTVLDLFDGRESLRPL----WEQVQGFREAVV 95
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYG---LPHCL 117
++ + P+ G + + SQGGL RA+ + + ISL PQ G YG L
Sbjct: 96 PIMAKAPQ---GVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWL 152
Query: 118 YPTHEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQI-- 175
+PT +R L Y W Q F YWHDP ++ Y S FLA IN E
Sbjct: 153 FPTS-----MRSNLYRICYSPWGQ-EFSICNYWHDPHHDDLYLNASSFLALINGERDHPN 206
Query: 176 NTNYSDNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIG 234
T + N R+ LVL+ +D ++ P S +FGFY + TVL +++ +Y+ + G
Sbjct: 207 ATVWRKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANE--TVLEMEEQLVYLRDSFG 263
>sp|O35448|PPT2_MOUSE Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 3 HGMGDSCCNPFSLGHFSKFLEEQMPTVYIKSLRI--GNNSIEDIENGFFMNINDQVTLAC 60
HG+ DS +S H ++ E + L + G S+ + + +
Sbjct: 43 HGLFDSS---YSFRHLLDYINETHTGTVVTVLDLFDGRESLRPL----WEQVQGFREAVV 95
Query: 61 KLIGEDPELKMGYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYG---LPHCL 117
++ + PE G + + SQGGL RA+ + + + ISL PQ G YG L
Sbjct: 96 PIMEKAPE---GVHLICYSQGGLVCRALLSVMDNHNVDSFISLSSPQMGQYGDTDYLKWL 152
Query: 118 YPTHEICDYLRRVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQI-- 175
+PT +R L Y W Q F YWHDP ++ Y S FLA IN E
Sbjct: 153 FPTS-----MRSNLYRVCYSPWGQ-EFSICNYWHDPHHDDLYLNASSFLALINGERDHPN 206
Query: 176 NTNYSDNLNRLRKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIG 234
T + N R+ +LVL+ +D ++ P S +FGFY + TVL +++ +Y+ + G
Sbjct: 207 ATAWRKNFLRVGRLVLIGGPDDGVITPWQSSFFGFYDANE--TVLEMEEQPVYLRDSFG 263
>sp|Q6PCJ9|PPT2A_XENLA Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN=ppt2-a PE=2 SV=1
Length = 296
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 72 GYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYG---LPHCLYPTHEICDYLR 128
G + L SQGGL R + Q P + ISL PQ G YG L+PT+ + R
Sbjct: 98 GVHLLCYSQGGLICRGLLQTMPDHNVDTFISLSSPQMGQYGDTDYLRYLFPTYVKSNLYR 157
Query: 129 RVLNVGAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQI--NTNYSDNLNRL 186
++ + F +W+DP + Y S FLA +N+E T++ N RL
Sbjct: 158 LC------YTQMGQTFSICNFWNDPHHHGIYVNVSDFLAPLNSERPEPNATDWKKNFLRL 211
Query: 187 RKLVLVKFTEDTMVQPKDSEWFGFYAPGQASTVLPLQKTKLYIEVNIG 234
RK+VL+ +D ++ P +S FGFY + TVL ++ +Y + G
Sbjct: 212 RKMVLIGGPDDGVITPWESSHFGFY--DENETVLEMKYQMVYQDDTFG 257
>sp|Q6GNY7|PPT2B_XENLA Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-b PE=2 SV=1
Length = 288
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 72 GYNALGVSQGGLFLRAVAQRCPSPPMLNLISLGGPQQGVYGLPHCLYPTHEICDYLRRVL 131
G + + SQGGL R + + P + I+L P G YG+ LY + ++
Sbjct: 90 GVHLICYSQGGLICRGLLETMPEHNVDTFIALSSPLMGQYGM--TLYVQKALP-----LV 142
Query: 132 NVGAYWSWIQARFVQ----AEYWHDPMNEASYQTGSMFLADINNEL--QINTNYSDNLNR 185
N+ A +F + YW DP Y S FL +NNEL +T N R
Sbjct: 143 NISALQEVCYRKFFKEISICGYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLR 202
Query: 186 LRKLVLVKFTEDTMVQPKDSEWFGFY 211
LRKLVL+ +D ++ P S FGFY
Sbjct: 203 LRKLVLIGGPDDEVIAPWQSSHFGFY 228
>sp|Q5TH69|BIG3_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo
sapiens GN=ARFGEF3 PE=1 SV=3
Length = 2177
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Query: 85 LRAVAQRCP---SPPMLNLI--------SLGGPQQGVYGLPHCLYPTHEICDYLRRVLNV 133
L A CP PP L+L+ GP G+Y + H L P + +LRR
Sbjct: 1461 LTAAVSNCPRQHQPPTLDLLFELLRDVTKTPGPGFGIYAVVHLLLPVMSV--WLRRSHKD 1518
Query: 134 GAYWSWIQARFVQAEYWHDPMNEASYQTGSMFLADINNELQINTNYSD 181
+YW A F A + Q S +DI E INT D
Sbjct: 1519 HSYWDMASANFKHAIGLSCELVVEHIQ--SFLHSDIRYESMINTMLKD 1564
>sp|A0JWX8|MSHC_ARTS2 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase OS=Arthrobacter sp. (strain FB24) GN=mshC PE=3
SV=1
Length = 426
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 137 WSWIQARFVQAEY----WHDPMNEASYQTGSMFLADINNELQINTNYSDNLNRLRKLVLV 192
WSW +A F QA+ W D + A ++ + +A++ +EL + N L + + +
Sbjct: 339 WSWTEAGFAQAKTRLAEWRDALTMAPGESAATLIAEMRSELANDLNAPGALAAVDRWAVA 398
Query: 193 KFTEDTMVQPKD 204
+ P D
Sbjct: 399 AKQQAGAGSPMD 410
>sp|Q9HKF1|ASSY_THEAC Argininosuccinate synthase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=argG PE=3 SV=2
Length = 402
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 103 LGGPQQGVYGLPHCLYPTHEICDYLRRVLN-----VGAYWSWIQARFVQAEYWHDPMNEA 157
+G VY P TH +LN V W A+FV WHDP+ A
Sbjct: 257 VGLKSHEVYECPAATVITHAHRYLESLILNRNEAEVKMNMDWQFAKFVYGGLWHDPVMNA 316
Query: 158 SYQTGSMFLADINNELQINTNY 179
+ F DI+ E++I ++
Sbjct: 317 VNAAEAEFNRDISGEIKIRMSH 338
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,398,667
Number of Sequences: 539616
Number of extensions: 4065319
Number of successful extensions: 8346
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8307
Number of HSP's gapped (non-prelim): 22
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)