Query psy736
Match_columns 304
No_of_seqs 286 out of 2233
Neff 9.0
Searched_HMMs 46136
Date Sat Aug 17 00:45:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy736.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/736hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3738|consensus 100.0 3E-52 6.5E-57 364.5 12.2 276 1-280 114-398 (559)
2 KOG3736|consensus 100.0 5.6E-50 1.2E-54 374.3 11.9 284 1-287 131-426 (578)
3 cd02510 pp-GalNAc-T pp-GalNAc- 100.0 1.2E-46 2.6E-51 337.7 24.0 269 14-285 1-281 (299)
4 KOG3737|consensus 100.0 2.3E-45 5.1E-50 320.8 9.9 275 1-282 145-444 (603)
5 cd06437 CESA_CaSu_A2 Cellulose 100.0 3.4E-31 7.3E-36 228.8 15.2 209 11-232 1-216 (232)
6 COG1216 Predicted glycosyltran 100.0 3.7E-30 8.1E-35 231.4 16.5 213 9-235 1-226 (305)
7 cd02520 Glucosylceramide_synth 100.0 2E-30 4.4E-35 218.4 13.5 173 11-230 1-178 (196)
8 cd06421 CESA_CelA_like CESA_Ce 100.0 5.3E-30 1.2E-34 220.9 13.6 208 11-230 1-212 (234)
9 cd06427 CESA_like_2 CESA_like_ 100.0 8.9E-30 1.9E-34 221.3 12.2 205 11-227 1-210 (241)
10 PRK11204 N-glycosyltransferase 100.0 7.9E-29 1.7E-33 232.3 16.4 210 8-232 51-263 (420)
11 cd04184 GT2_RfbC_Mx_like Myxoc 100.0 7.4E-29 1.6E-33 209.1 14.5 194 11-226 1-198 (202)
12 cd06420 GT2_Chondriotin_Pol_N 100.0 1.5E-28 3.3E-33 203.8 16.1 179 15-230 1-182 (182)
13 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 4.7E-29 1E-33 234.6 13.6 218 8-230 46-268 (439)
14 TIGR03469 HonB hopene-associat 100.0 5E-29 1.1E-33 230.8 11.9 203 8-227 37-260 (384)
15 cd02525 Succinoglycan_BP_ExoA 100.0 4.1E-28 9E-33 210.7 16.6 208 12-231 1-210 (249)
16 PRK14583 hmsR N-glycosyltransf 100.0 2.9E-28 6.3E-33 229.7 16.8 208 9-231 73-283 (444)
17 cd04185 GT_2_like_b Subfamily 100.0 5.1E-28 1.1E-32 204.3 15.3 176 15-235 1-179 (202)
18 PF10111 Glyco_tranf_2_2: Glyc 100.0 2.1E-28 4.6E-33 217.4 13.2 215 14-233 1-226 (281)
19 cd06433 GT_2_WfgS_like WfgS an 100.0 6.9E-28 1.5E-32 202.2 14.8 194 14-232 1-197 (202)
20 cd06913 beta3GnTL1_like Beta 1 100.0 5.3E-28 1.1E-32 207.0 13.8 195 15-231 1-211 (219)
21 cd06435 CESA_NdvC_like NdvC_li 100.0 8.4E-28 1.8E-32 207.8 14.7 202 14-229 1-209 (236)
22 PF13641 Glyco_tranf_2_3: Glyc 100.0 9.5E-28 2.1E-32 206.4 14.4 205 11-231 1-212 (228)
23 cd04195 GT2_AmsE_like GT2_AmsE 100.0 6.9E-28 1.5E-32 203.2 12.1 195 14-228 1-200 (201)
24 TIGR03472 HpnI hopanoid biosyn 99.9 1.2E-27 2.6E-32 220.8 11.8 209 8-229 38-253 (373)
25 cd04192 GT_2_like_e Subfamily 99.9 3.7E-27 7.9E-32 202.2 13.2 190 15-224 1-204 (229)
26 cd02522 GT_2_like_a GT_2_like_ 99.9 5.9E-26 1.3E-30 194.1 18.0 184 13-229 1-186 (221)
27 cd02526 GT2_RfbF_like RfbF is 99.9 6.1E-27 1.3E-31 202.4 11.9 199 15-233 1-208 (237)
28 cd04186 GT_2_like_c Subfamily 99.9 2.5E-26 5.4E-31 186.8 14.8 166 15-230 1-166 (166)
29 PRK10063 putative glycosyl tra 99.9 1.3E-25 2.8E-30 195.9 19.7 190 11-229 1-196 (248)
30 PRK11498 bcsA cellulose syntha 99.9 6.5E-26 1.4E-30 223.7 19.0 209 8-228 257-468 (852)
31 PLN02726 dolichyl-phosphate be 99.9 1.1E-26 2.3E-31 202.3 12.0 212 7-232 5-221 (243)
32 PRK10018 putative glycosyl tra 99.9 6.1E-26 1.3E-30 200.6 16.3 202 9-233 3-211 (279)
33 cd06439 CESA_like_1 CESA_like_ 99.9 3E-26 6.6E-31 199.9 13.8 198 8-232 26-232 (251)
34 PRK10073 putative glycosyl tra 99.9 8.3E-26 1.8E-30 204.7 15.3 205 9-228 4-215 (328)
35 cd06442 DPM1_like DPM1_like re 99.9 2.2E-26 4.8E-31 197.1 10.6 197 15-233 1-207 (224)
36 cd04196 GT_2_like_d Subfamily 99.9 2E-25 4.4E-30 189.4 14.8 198 14-229 1-203 (214)
37 TIGR03030 CelA cellulose synth 99.9 2.9E-25 6.2E-30 219.6 17.7 210 8-229 128-358 (713)
38 TIGR01556 rhamnosyltran L-rham 99.9 2.5E-25 5.3E-30 197.8 14.9 189 18-232 1-204 (281)
39 cd06434 GT2_HAS Hyaluronan syn 99.9 1.3E-25 2.7E-30 193.9 10.3 203 12-229 1-213 (235)
40 COG1215 Glycosyltransferases, 99.9 7.5E-23 1.6E-27 192.7 18.8 205 10-227 53-263 (439)
41 cd04188 DPG_synthase DPG_synth 99.9 7.3E-23 1.6E-27 174.2 8.9 188 15-222 1-201 (211)
42 PF00535 Glycos_transf_2: Glyc 99.9 1.2E-21 2.6E-26 158.9 11.4 96 14-112 1-96 (169)
43 cd04190 Chitin_synth_C C-termi 99.9 4.3E-22 9.3E-27 173.5 8.8 186 15-230 1-223 (244)
44 cd06438 EpsO_like EpsO protein 99.9 1.2E-22 2.6E-27 169.1 5.0 94 15-112 1-99 (183)
45 cd06423 CESA_like CESA_like is 99.9 5E-22 1.1E-26 161.8 8.2 95 15-112 1-96 (180)
46 cd04179 DPM_DPG-synthase_like 99.9 1E-22 2.2E-27 169.1 3.9 97 15-112 1-97 (185)
47 PRK14716 bacteriophage N4 adso 99.9 7.2E-21 1.6E-25 179.7 14.2 198 8-226 63-286 (504)
48 cd04187 DPM1_like_bac Bacteria 99.8 1.7E-21 3.6E-26 161.7 6.4 179 15-210 1-180 (181)
49 PRK13915 putative glucosyl-3-p 99.8 7E-21 1.5E-25 170.6 8.7 103 9-112 29-134 (306)
50 PTZ00260 dolichyl-phosphate be 99.8 4.5E-20 9.8E-25 167.5 11.3 104 8-112 67-180 (333)
51 cd06436 GlcNAc-1-P_transferase 99.8 7.9E-20 1.7E-24 153.3 6.6 93 15-112 1-107 (191)
52 KOG2978|consensus 99.8 6.3E-19 1.4E-23 140.9 9.3 205 10-232 2-216 (238)
53 COG0463 WcaA Glycosyltransfera 99.8 1.1E-18 2.3E-23 145.7 9.6 99 10-112 2-100 (291)
54 PRK10714 undecaprenyl phosphat 99.8 3.2E-18 7E-23 154.9 12.5 101 9-112 4-108 (325)
55 cd04191 Glucan_BSP_ModH Glucan 99.8 4.7E-18 1E-22 148.4 10.7 201 13-226 1-228 (254)
56 PRK11234 nfrB bacteriophage N4 99.7 9E-18 1.9E-22 164.9 11.7 200 8-225 60-282 (727)
57 cd00761 Glyco_tranf_GTA_type G 99.7 1.4E-16 3.1E-21 126.3 12.2 154 15-218 1-154 (156)
58 cd02511 Beta4Glucosyltransfera 99.7 4.8E-17 1E-21 140.3 8.1 89 12-112 1-89 (229)
59 PRK05454 glucosyltransferase M 99.6 5.4E-15 1.2E-19 144.7 14.3 206 8-225 121-352 (691)
60 PRK15489 nfrB bacteriophage N4 99.6 3.6E-15 7.9E-20 145.1 11.9 189 8-220 68-285 (703)
61 cd00899 b4GalT Beta-4-Galactos 99.6 7.7E-14 1.7E-18 117.3 15.7 161 12-234 3-172 (219)
62 PF13712 Glyco_tranf_2_5: Glyc 99.5 4.4E-14 9.5E-19 120.5 11.5 198 13-257 1-217 (217)
63 PF02709 Glyco_transf_7C: N-te 99.3 9.4E-13 2E-17 93.3 3.4 58 173-230 17-75 (78)
64 cd02514 GT13_GLCNAC-TI GT13_GL 99.3 1.2E-11 2.6E-16 111.1 9.9 192 13-231 2-211 (334)
65 KOG2977|consensus 99.3 6.5E-12 1.4E-16 107.3 7.0 93 12-105 68-168 (323)
66 PF13632 Glyco_trans_2_3: Glyc 99.1 2.1E-10 4.5E-15 96.0 7.3 56 172-229 69-124 (193)
67 KOG3588|consensus 99.0 3.4E-09 7.4E-14 93.6 12.2 205 6-234 224-442 (494)
68 KOG3916|consensus 99.0 4.5E-09 9.7E-14 92.1 10.7 155 11-228 151-312 (372)
69 PF13506 Glyco_transf_21: Glyc 98.9 9.6E-10 2.1E-14 90.7 4.2 132 81-226 17-151 (175)
70 COG4092 Predicted glycosyltran 98.9 9.3E-09 2E-13 87.2 8.0 186 10-214 1-216 (346)
71 PF05679 CHGN: Chondroitin N-a 98.6 6.4E-06 1.4E-10 78.9 18.4 205 6-233 242-471 (499)
72 KOG2547|consensus 98.4 4.6E-07 1E-11 80.6 6.7 200 8-221 82-289 (431)
73 PF13704 Glyco_tranf_2_4: Glyc 98.0 1.9E-05 4.1E-10 58.3 6.4 79 20-105 1-82 (97)
74 PF11397 GlcNAc: Glycosyltrans 97.7 0.0017 3.7E-08 59.1 15.1 217 13-236 2-270 (343)
75 KOG3917|consensus 97.7 0.00021 4.5E-09 59.6 7.9 147 9-218 72-224 (310)
76 PF09488 Osmo_MPGsynth: Mannos 97.7 0.0002 4.3E-09 64.0 8.1 93 11-109 50-174 (381)
77 PF03071 GNT-I: GNT-I family; 97.6 0.00011 2.3E-09 68.3 6.3 197 9-231 91-306 (434)
78 PF03142 Chitin_synth_2: Chiti 97.6 0.00078 1.7E-08 64.4 11.2 41 12-52 26-66 (527)
79 TIGR02460 osmo_MPGsynth mannos 97.5 0.00059 1.3E-08 60.7 9.0 93 11-109 50-174 (381)
80 PRK14503 mannosyl-3-phosphogly 97.5 0.00059 1.3E-08 61.1 9.0 93 11-109 51-175 (393)
81 PF03452 Anp1: Anp1; InterPro 97.1 0.0066 1.4E-07 53.0 10.7 101 8-109 22-157 (269)
82 PLN02893 Cellulose synthase-li 97.0 0.0065 1.4E-07 60.1 11.1 32 81-112 281-317 (734)
83 PRK14502 bifunctional mannosyl 96.8 0.0058 1.3E-07 60.0 9.0 93 11-109 55-179 (694)
84 PF13896 Glyco_transf_49: Glyc 96.5 0.041 9E-07 49.7 11.3 45 189-233 242-286 (317)
85 PF11735 CAP59_mtransfer: Cryp 95.5 0.23 5.1E-06 42.9 11.2 193 15-215 4-241 (241)
86 PF06306 CgtA: Beta-1,4-N-acet 95.3 0.069 1.5E-06 47.4 7.3 95 12-112 88-193 (347)
87 PF13733 Glyco_transf_7N: N-te 95.0 0.053 1.1E-06 42.2 5.0 77 11-109 47-126 (136)
88 COG2943 MdoH Membrane glycosyl 94.5 0.49 1.1E-05 45.1 10.9 50 175-224 316-371 (736)
89 KOG2571|consensus 93.4 0.16 3.4E-06 51.2 5.7 27 202-228 551-577 (862)
90 KOG1413|consensus 91.8 0.43 9.3E-06 43.0 5.9 192 9-227 65-277 (411)
91 cd00218 GlcAT-I Beta1,3-glucur 88.4 2.6 5.7E-05 35.8 7.6 93 11-109 1-110 (223)
92 PF09258 Glyco_transf_64: Glyc 87.6 1.7 3.7E-05 37.8 6.3 92 13-112 1-93 (247)
93 PF11316 Rhamno_transf: Putati 87.1 1.7 3.7E-05 37.5 6.0 80 30-112 47-132 (234)
94 PLN03180 reversibly glycosylat 87.0 2.9 6.2E-05 37.7 7.3 28 83-110 82-109 (346)
95 PLN02190 cellulose synthase-li 86.1 1.4 3.1E-05 44.0 5.4 55 9-63 91-148 (756)
96 PHA01631 hypothetical protein 85.6 1.9 4E-05 34.7 4.9 20 90-109 67-86 (176)
97 PF03214 RGP: Reversibly glyco 85.2 1 2.3E-05 40.3 3.7 95 12-112 9-109 (348)
98 PLN02458 transferase, transfer 80.3 11 0.00024 34.0 8.1 95 10-109 111-217 (346)
99 PF01762 Galactosyl_T: Galacto 78.4 15 0.00032 30.4 8.2 47 172-218 145-191 (195)
100 KOG1476|consensus 75.0 21 0.00045 32.0 8.2 92 10-109 86-196 (330)
101 KOG3736|consensus 69.1 0.76 1.6E-05 44.7 -2.1 39 118-156 315-356 (578)
102 TIGR03202 pucB xanthine dehydr 68.7 27 0.00058 28.6 7.4 81 21-108 24-109 (190)
103 PF05060 MGAT2: N-acetylglucos 67.7 1E+02 0.0022 28.4 11.9 52 178-231 234-292 (356)
104 PF01501 Glyco_transf_8: Glyco 66.5 14 0.00031 31.2 5.5 85 25-109 12-113 (250)
105 PF11051 Mannosyl_trans3: Mann 65.9 15 0.00033 32.3 5.6 91 15-109 4-105 (271)
106 cd00505 Glyco_transf_8 Members 65.6 29 0.00064 29.8 7.3 48 15-65 3-52 (246)
107 KOG3738|consensus 65.0 0.66 1.4E-05 42.6 -3.2 63 116-178 291-362 (559)
108 PRK00317 mobA molybdopterin-gu 64.7 40 0.00087 27.6 7.7 74 21-107 28-101 (193)
109 PLN02893 Cellulose synthase-li 64.7 13 0.00028 37.4 5.4 56 8-63 98-156 (734)
110 cd04181 NTP_transferase NTP_tr 64.4 21 0.00046 29.6 6.1 89 10-109 19-110 (217)
111 PLN02638 cellulose synthase A 62.3 17 0.00038 38.0 5.8 84 25-109 457-565 (1079)
112 PLN02195 cellulose synthase A 58.6 15 0.00032 38.2 4.6 28 82-109 437-468 (977)
113 KOG4179|consensus 57.2 7.4 0.00016 36.1 2.1 55 11-66 3-57 (568)
114 cd06915 NTP_transferase_WcbM_l 57.0 34 0.00074 28.4 6.1 89 10-109 19-110 (223)
115 COG2068 Uncharacterized MobA-r 56.0 70 0.0015 26.8 7.5 73 25-105 32-107 (199)
116 PLN02189 cellulose synthase 55.1 25 0.00054 36.8 5.6 84 25-109 439-547 (1040)
117 KOG3737|consensus 53.2 4.6 9.9E-05 37.2 0.1 38 119-156 334-374 (603)
118 PLN03153 hypothetical protein; 52.9 20 0.00044 34.5 4.3 49 174-223 261-314 (537)
119 TIGR03310 matur_ygfJ molybdenu 52.5 63 0.0014 26.0 6.9 80 17-106 20-101 (188)
120 PF12804 NTP_transf_3: MobA-li 52.2 92 0.002 24.3 7.6 76 21-107 22-98 (160)
121 cd06422 NTP_transferase_like_1 47.6 58 0.0013 27.2 6.1 90 9-109 19-111 (221)
122 PLN02195 cellulose synthase A 46.1 43 0.00093 34.9 5.6 56 8-63 249-307 (977)
123 cd04182 GT_2_like_f GT_2_like_ 45.3 73 0.0016 25.4 6.1 77 21-106 24-102 (186)
124 PLN02436 cellulose synthase A 44.9 47 0.001 34.9 5.7 56 8-63 362-420 (1094)
125 PLN02915 cellulose synthase A 44.9 53 0.0012 34.5 6.1 56 8-63 284-342 (1044)
126 cd04194 GT8_A4GalT_like A4GalT 44.1 69 0.0015 27.4 6.1 41 25-66 13-53 (248)
127 PLN02189 cellulose synthase 43.5 49 0.0011 34.7 5.6 56 8-63 328-386 (1040)
128 PLN02400 cellulose synthase 42.7 50 0.0011 34.8 5.5 56 8-63 353-411 (1085)
129 PLN02638 cellulose synthase A 42.5 51 0.0011 34.7 5.5 56 8-63 346-404 (1079)
130 KOG1332|consensus 42.2 9.2 0.0002 33.1 0.3 17 286-302 59-78 (299)
131 cd02503 MobA MobA catalyzes th 41.0 1E+02 0.0023 24.6 6.4 72 21-106 24-95 (181)
132 TIGR00334 5S_RNA_mat_M5 ribonu 40.2 44 0.00096 27.4 3.9 14 93-106 46-59 (174)
133 KOG1022|consensus 39.0 79 0.0017 30.7 5.8 93 8-112 440-537 (691)
134 COG1213 Predicted sugar nucleo 37.4 42 0.00091 28.9 3.5 78 25-112 32-114 (239)
135 cd04189 G1P_TT_long G1P_TT_lon 36.5 1.4E+02 0.003 25.1 6.7 89 9-109 20-112 (236)
136 PRK02726 molybdopterin-guanine 36.2 98 0.0021 25.6 5.6 76 21-108 31-106 (200)
137 cd06431 GT8_LARGE_C LARGE cata 35.4 89 0.0019 27.7 5.4 47 12-61 2-48 (280)
138 PLN02248 cellulose synthase-li 34.1 87 0.0019 33.3 5.7 56 8-63 364-422 (1135)
139 PRK15171 lipopolysaccharide 1, 34.0 1.3E+02 0.0028 27.4 6.4 98 11-109 24-135 (334)
140 PF02434 Fringe: Fringe-like; 34.0 56 0.0012 28.4 3.9 47 176-222 149-203 (252)
141 KOG2264|consensus 33.9 65 0.0014 31.4 4.4 84 12-108 650-738 (907)
142 PF03552 Cellulose_synt: Cellu 33.8 40 0.00086 34.0 3.2 42 68-109 165-215 (720)
143 PF00483 NTP_transferase: Nucl 33.6 70 0.0015 27.1 4.4 87 16-109 24-117 (248)
144 TIGR02665 molyb_mobA molybdopt 33.3 1.6E+02 0.0034 23.7 6.3 71 25-106 28-99 (186)
145 PRK00103 rRNA large subunit me 32.3 2.3E+02 0.005 22.7 6.8 42 12-54 2-43 (157)
146 cd02540 GT2_GlmU_N_bac N-termi 30.9 1.4E+02 0.003 24.9 5.8 84 10-106 16-101 (229)
147 cd04183 GT2_BcE_like GT2_BcbE_ 30.4 3.2E+02 0.0068 22.8 8.0 92 9-109 18-112 (231)
148 COG2452 Predicted site-specifi 30.3 1E+02 0.0022 25.6 4.4 52 10-66 112-164 (193)
149 cd02523 PC_cytidylyltransferas 30.1 1.1E+02 0.0024 25.6 5.1 90 10-111 19-109 (229)
150 PF01793 Glyco_transf_15: Glyc 29.8 1.1E+02 0.0025 27.8 5.1 45 10-54 54-98 (328)
151 cd02538 G1P_TT_short G1P_TT_sh 29.7 2.3E+02 0.005 23.9 7.0 91 9-109 20-113 (240)
152 PF07492 Trehalase_Ca-bi: Neut 27.7 65 0.0014 18.1 2.0 24 31-54 1-24 (30)
153 cd06425 M1P_guanylylT_B_like_N 27.4 1.5E+02 0.0032 24.9 5.4 90 10-108 21-114 (233)
154 KOG2733|consensus 25.9 1.4E+02 0.003 27.6 4.9 46 9-56 30-75 (423)
155 KOG0679|consensus 25.7 18 0.0004 33.3 -0.6 14 287-300 386-399 (426)
156 TIGR00454 conserved hypothetic 25.2 3.1E+02 0.0068 22.3 6.7 80 16-107 21-101 (183)
157 PF11181 YflT: Heat induced st 24.5 1.5E+02 0.0032 21.7 4.2 33 16-51 2-34 (103)
158 PF01697 Glyco_transf_92: Glyc 24.2 2.3E+02 0.0049 24.6 6.1 93 13-109 3-118 (285)
159 PF04123 DUF373: Domain of unk 23.1 1.1E+02 0.0023 28.2 3.7 48 12-62 66-119 (344)
160 cd02516 CDP-ME_synthetase CDP- 23.0 3E+02 0.0065 22.6 6.4 88 10-108 18-109 (218)
161 cd02517 CMP-KDO-Synthetase CMP 22.0 4E+02 0.0086 22.3 7.1 47 174-222 173-219 (239)
162 COG1107 Archaea-specific RecJ- 21.9 90 0.002 30.7 3.1 23 45-67 420-442 (715)
163 COG1209 RfbA dTDP-glucose pyro 21.7 5.8E+02 0.012 22.7 12.1 178 16-223 25-215 (286)
164 PF03360 Glyco_transf_43: Glyc 21.2 1.9E+02 0.0042 24.4 4.7 27 83-109 59-92 (207)
165 PRK13600 putative ribosomal pr 21.1 99 0.0022 22.0 2.5 58 26-87 17-74 (84)
166 TIGR00453 ispD 2-C-methyl-D-er 20.8 4.2E+02 0.0092 21.8 6.9 87 10-108 17-104 (217)
167 PLN02915 cellulose synthase A 20.4 1.6E+02 0.0035 31.2 4.7 42 68-109 453-503 (1044)
168 PRK14490 putative bifunctional 20.1 3.4E+02 0.0073 25.0 6.5 75 20-107 197-271 (369)
No 1
>KOG3738|consensus
Probab=100.00 E-value=3e-52 Score=364.49 Aligned_cols=276 Identities=46% Similarity=0.816 Sum_probs=244.9
Q ss_pred CCCCCCCCCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCC
Q psy736 1 CKKKSYPTFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWG 80 (304)
Q Consensus 1 ~~~~~y~~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~ 80 (304)
|..+.|..++|..||||..+||++..|.+|+.|++++++.++..|||+|||+|.|.+. ...+.. ..++--.-++.+.
T Consensus 114 C~~~~y~~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped--~~~L~r-i~kvr~LRN~~Re 190 (559)
T KOG3738|consen 114 CRDVDYKVDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPED--GKLLKR-IPKVRVLRNNERE 190 (559)
T ss_pred cccceeecCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHH--HHHHhh-hheeeeecccchh
Confidence 8889999999999999999999999999999999999999999999999999999831 112211 2222222344567
Q ss_pred cHHHHHhccccccCCcEEEEecCCcccccccc---------cceeeeeceeeeeCCCceeeeccCCceecccccCCCccc
Q psy736 81 GFNWKLREKNRHKKTVVCPIIDVISDQTFEYI---------TAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRW 151 (304)
Q Consensus 81 G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l---------~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (304)
|+.+.++.|+..|+|.+|.|||++|++..+|| +...+++|.++.|+.+.|.|.++.....|||+|.+.|+|
T Consensus 191 GLirSRvrGAdvA~a~vltFLDSHcEvN~~WLePLL~Rvaed~trvVsPiiDvIn~dnf~Y~~asadLrGGFDWsLhF~W 270 (559)
T KOG3738|consen 191 GLIRSRVRGADVAQATVLTFLDSHCEVNEGWLEPLLERVAEDTTRVVSPIIDVINLDNFSYVGASADLRGGFDWSLHFKW 270 (559)
T ss_pred hhhhhhccccccccceEEEEEecceeecchhhHHHHHHHhhcccceeecccccccccccccccchhhhcCCcceEEEEEe
Confidence 99999999999999999999999999999776 667799999999999999999988888999999999999
Q ss_pred ccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeecc
Q psy736 152 YRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFR 231 (304)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r 231 (304)
...+......+ .+++.|+++|++.|+.|+|.|++|.++|-||..+.+||||..|+++|+|++|+.+.++|+++|.|.+|
T Consensus 271 e~~~~eqr~sr-~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFR 349 (559)
T KOG3738|consen 271 EQMQLEQRESR-ADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFR 349 (559)
T ss_pred hhcCHHHHhhc-cCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhh
Confidence 88776544433 68899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCchHHHHHHHHHHHHhhhhhhHHHHHhhCcCCcccccccc
Q psy736 232 DKSPYTFPGGVSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVSTCA 280 (304)
Q Consensus 232 ~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~~~~~~~~~~~~~~~~ 280 (304)
+.+||.+|.+....+.+|..|.++.||||||.+||+.+|....+..+-.
T Consensus 350 krHpy~FP~gs~~ty~~NTkr~AEvWmDEYK~~yyaarPsAr~vpfg~i 398 (559)
T KOG3738|consen 350 KRHPYTFPGGSGNTYIKNTKRAAEVWMDEYKNYYYAARPSARRVPFGNI 398 (559)
T ss_pred ccCCCcCCCCCCcchhhcchHHHHHHHHHHHHHHHhcCchhhcCCCccH
Confidence 9999999999888999999999999999999999999998876554443
No 2
>KOG3736|consensus
Probab=100.00 E-value=5.6e-50 Score=374.34 Aligned_cols=284 Identities=51% Similarity=0.879 Sum_probs=248.4
Q ss_pred CCC-CCCCCCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCc-hHHHHHHhhccccceeecc-c
Q psy736 1 CKK-KSYPTFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVV-CPIIDVISDQTFEYITASD-M 77 (304)
Q Consensus 1 ~~~-~~y~~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t-~~ii~~~~~~~~~~i~~~~-~ 77 (304)
|++ ++|...+|.+||||+.+||++..|.+++.|+++.+++....|||+|||+|+..- ...+++....... ++.+. .
T Consensus 131 C~~~~~~~~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~~~-v~i~r~~ 209 (578)
T KOG3736|consen 131 CKKLKYYSDKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRFSK-VRILRTK 209 (578)
T ss_pred hhhccccccccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhhcc-eeEEeec
Confidence 766 666788999999999999999999999999999999888899999999998773 2223333322222 33322 3
Q ss_pred CCCcHHHHHhccccccCCcEEEEecCCcccccccc---------cceeeeeceeeeeCCCceeeeccCCceecccccCCC
Q psy736 78 TWGGFNWKLREKNRHKKTVVCPIIDVISDQTFEYI---------TAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLN 148 (304)
Q Consensus 78 ~~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l---------~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 148 (304)
.+.|+.+|+..|++.|+||+|+|||++|++...|| ++..+++|.++.++.++|.+.......+|||+|.+.
T Consensus 210 ~R~GLIrARl~GA~~A~geVL~FLDsHcE~n~gWLePLL~~I~~~r~tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l~ 289 (578)
T KOG3736|consen 210 KREGLIRARLLGASMATGEVLTFLDSHCEVNVGWLEPLLARIAEDRKTVVCPVIDVIDDNTFEYEKQSELMRGGFDWELT 289 (578)
T ss_pred chhhhHHHHhhhhhhhhchheeeeecceeEecCcchHHHHHhhhcCceeecceEEeecCcCceecccCccceeeeeccee
Confidence 36799999999999999999999999999999665 678899999999999999998777778999999999
Q ss_pred cccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEe
Q psy736 149 FRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGH 228 (304)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 228 (304)
++|..+|.....++ ..++.|+++|++.||.|+|.|+.|.++|+||+++.+||||.+||++|+|++|+++..+|+++|.|
T Consensus 290 f~w~~lP~~~~~~~-~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGH 368 (578)
T KOG3736|consen 290 FKWERLPLPEEKRR-ELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGH 368 (578)
T ss_pred EEeccCCccHhhcc-cCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceee
Confidence 99988887665543 35588999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCccCCCCchHHHHHHHHHHHHhhhhhhHHHHHhhCcCCccccccccccceeee
Q psy736 229 VFRDKSPYTFPGGVSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVSTCAAHFRMLS 287 (304)
Q Consensus 229 ~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (304)
.+|...||.++.+. ..+.+|.+|.+++|||+|+++||..+|.+..+..+.+..|+.|+
T Consensus 369 ifRk~~pY~~p~~~-~~~~~N~~RlAeVWmDeyK~~~y~~~P~~~~~d~GDvseR~~LR 426 (578)
T KOG3736|consen 369 IFRKRKPYTFPDGT-DTATRNLKRLAEVWMDEYKEQFYKRMPGLRNIDEGDLTERKALR 426 (578)
T ss_pred eeecCCCccCCCcc-hhhhhchhhhhhhhhHHHHHHHHhhCccccccCCCCchhHHHHH
Confidence 99999999987655 67899999999999999999999999999999888888888775
No 3
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=100.00 E-value=1.2e-46 Score=337.71 Aligned_cols=269 Identities=49% Similarity=0.864 Sum_probs=204.7
Q ss_pred EEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH-Hhhccccceeec-ccCCCcHHHHHhcccc
Q psy736 14 SIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV-ISDQTFEYITAS-DMTWGGFNWKLREKNR 91 (304)
Q Consensus 14 SIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~-~~~~~~~~i~~~-~~~~~G~~~a~n~g~~ 91 (304)
|||||+||+..+.|.+||+|+++|+++...+|||||||||+|+|.+++.. ........++.+ ...|.|+++|+|.|++
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~ 80 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAGAR 80 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHHHH
Confidence 79999999955899999999999998755569999999999999887754 112222233333 2457899999999999
Q ss_pred ccCCcEEEEecCCcccccccc---------cceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhc
Q psy736 92 HKKTVVCPIIDVISDQTFEYI---------TAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRR 162 (304)
Q Consensus 92 ~A~gd~l~flD~D~~~~~~~l---------~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
+|+||||+|||+|+++.|++| ....++.|.+..++...+.+.+......+++.|.+...+........ .
T Consensus 81 ~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 158 (299)
T cd02510 81 AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPEEER--R 158 (299)
T ss_pred HccCCEEEEEeCCcccCccHHHHHHHHHHhCCCeEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCHHHh--h
Confidence 999999999999999999776 23445667665555555544433222344455544444333322211 1
Q ss_pred CCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeecc-CCCCccCCCC
Q psy736 163 GGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFR-DKSPYTFPGG 241 (304)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r-~~~~~~~~~~ 241 (304)
......+..++.++|+||++||++|+++|||||+|..||+||+|||+|++++|++++++|.+.|.|+++ .+.++..+..
T Consensus 159 ~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~~~~~~ 238 (299)
T cd02510 159 RESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGG 238 (299)
T ss_pred hcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCCCCCCc
Confidence 122344567788899999999999999999999999988999999999999999999999999999999 6777765544
Q ss_pred chHHHHHHHHHHHHhhhhhhHHHHHhhCcCCcccccccccccee
Q psy736 242 VSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVSTCAAHFRM 285 (304)
Q Consensus 242 ~~~~~~~n~~r~~~~w~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (304)
. ..+.+|..|+.++|+++++..+|+.+|++..+..+.+..|+.
T Consensus 239 ~-~~~~~n~~r~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (299)
T cd02510 239 S-GTVLRNYKRVAEVWMDEYKEYFYKARPELRNIDYGDLSERKA 281 (299)
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCHHHHHH
Confidence 3 257899999999999999999999999988655555544443
No 4
>KOG3737|consensus
Probab=100.00 E-value=2.3e-45 Score=320.79 Aligned_cols=275 Identities=41% Similarity=0.755 Sum_probs=236.4
Q ss_pred CCCCCCCCCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccce-------e
Q psy736 1 CKKKSYPTFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYI-------T 73 (304)
Q Consensus 1 ~~~~~y~~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i-------~ 73 (304)
|+--+||..+|.+||||+.+|+.|..|.+|+.|++..+++....|||+|||-|+.+ .+++++++|+ +
T Consensus 145 CkhWdYpe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKe------hLkekLDeYv~~fnGlVk 218 (603)
T KOG3737|consen 145 CKHWDYPENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKE------HLKEKLDEYVKLFNGLVK 218 (603)
T ss_pred ccccCCcccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccH------HHHHHHHHHHHHhcCEEE
Confidence 88899999999999999999999999999999999999988889999999999887 5555555443 2
Q ss_pred ec-ccCCCcHHHHHhccccccCCcEEEEecCCcccccccc---------cceeeeeceeeeeCCCceeeeccCC----ce
Q psy736 74 AS-DMTWGGFNWKLREKNRHKKTVVCPIIDVISDQTFEYI---------TAKTVVCPIIDVISDQTFEYITASD----MT 139 (304)
Q Consensus 74 ~~-~~~~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l---------~~~~~~~~~i~~i~~~~~~~~~~~~----~~ 139 (304)
.+ ++.+.|+..|+..|++.|+|++|+||||+|++.-+|| ++..+..|.++.++.+++++...+. ..
T Consensus 219 V~Rne~REGLI~aRSiGA~~atGeV~ifLDAHCEVntNWlpPLlAPI~rdRtvmTVP~IDgId~n~~EyrpvyG~dn~h~ 298 (603)
T KOG3737|consen 219 VFRNERREGLIQARSIGAQKATGEVLIFLDAHCEVNTNWLPPLLAPISRDRTVMTVPLIDGIDGNTYEYRPVYGGDNDHA 298 (603)
T ss_pred EEecchhhhhhhhhccchhhccccEEEEEecceeeecccccccccccccCceEEEEeeeeeecCCceEEeeccCCcchhh
Confidence 22 2346799999999999999999999999999988766 5666788999999999998875322 36
Q ss_pred ecccccCCCcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEE
Q psy736 140 WGGFNWKLNFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILE 219 (304)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~ 219 (304)
.|.|.|.+.++..+++..+...+ ...+.|+++|+..|+.|+|.|++|.++|.||+++.+||+|..||++++||+|++|.
T Consensus 299 rGifeWgmLyKe~~~t~rE~r~R-khnsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~ 377 (603)
T KOG3737|consen 299 RGIFEWGMLYKEVPLTPREKRLR-KHNSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKIL 377 (603)
T ss_pred cchhhhhheeccCCCCHHHHHhh-hccCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEE
Confidence 78899999998888887766544 45678999999999999999999999999999999999999999999999999999
Q ss_pred EEeccEEEeeccCCCCccCCCC----chHHHHHHHHHHHHhhhhhhHHHHHhhCcCCcccccccccc
Q psy736 220 IIPCSHVGHVFRDKSPYTFPGG----VSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVSTCAAH 282 (304)
Q Consensus 220 ~~p~~~v~H~~r~~~~~~~~~~----~~~~~~~n~~r~~~~w~d~~~~~~~~~~~~~~~~~~~~~~~ 282 (304)
++|+++|.|.||...||....- ....+..|+.|..+.|+|+|+++||...|....+..+.+..
T Consensus 378 fVPCSrVGHvYR~~mpy~fgk~~~k~~~p~i~iNy~RVvetW~Ddyk~YfytreP~a~~l~~GDISe 444 (603)
T KOG3737|consen 378 FVPCSRVGHVYRSLMPYQFGKPPIKVGSPPILINYVRVVETWWDDYKDYFYTREPEAQALPYGDISE 444 (603)
T ss_pred EEEccccchhhhccccccCCCCccccCCCceEeehhhHHHHHHHhhhhheeecChhhccCCcccHHH
Confidence 9999999999998888765211 12356789999999999999999999999998876665543
No 5
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=3.4e-31 Score=228.81 Aligned_cols=209 Identities=15% Similarity=0.103 Sum_probs=136.1
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcc----ccceeecccCCCc-HHHH
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQT----FEYITASDMTWGG-FNWK 85 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~----~~~i~~~~~~~~G-~~~a 85 (304)
|+||||||+||++ +.|.+||+|+++|+++...+||||||| |+|+|.++++++.... .+........+.| .+.+
T Consensus 1 p~vSViIp~yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a 78 (232)
T cd06437 1 PMVTVQLPVFNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGA 78 (232)
T ss_pred CceEEEEecCCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHH
Confidence 6899999999999 999999999999998765579999998 9999998888764321 1222222333456 4789
Q ss_pred HhccccccCCcEEEEecCCcccccccccce--eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcC
Q psy736 86 LREKNRHKKTVVCPIIDVISDQTFEYITAK--TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRG 163 (304)
Q Consensus 86 ~n~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
+|.|+++|+||||+|+|+|+.++|++|... .+..+.+..+.... ............. ....... .......
T Consensus 79 ~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~~~~v~~v~~~~-~~~~~~~~~~~~~-~~~~~~~-~~~~~~~---- 151 (232)
T cd06437 79 LAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFADPKLGFVQTRW-GHINANYSLLTRV-QAMSLDY-HFTIEQV---- 151 (232)
T ss_pred HHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhcCCCeEEEecce-eeEcCCCchhhHh-hhhhHHh-hhhHhHh----
Confidence 999999999999999999999999777210 01112221111110 0000000000000 0000000 0000000
Q ss_pred CCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccC
Q psy736 164 GDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRD 232 (304)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~ 232 (304)
..........+.|+++++||++|+++||||+.. .+||+||++|++++|+++.|.|++.+.|..+.
T Consensus 152 -~~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~ 216 (232)
T cd06437 152 -ARSSTGLFFNFNGTAGVWRKECIEDAGGWNHDT---LTEDLDLSYRAQLKGWKFVYLDDVVVPAELPA 216 (232)
T ss_pred -hHhhcCCeEEeccchhhhhHHHHHHhCCCCCCc---chhhHHHHHHHHHCCCeEEEeccceeeeeCCc
Confidence 000111222346777789999999999999975 26999999999999999999999999987543
No 6
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.97 E-value=3.7e-30 Score=231.36 Aligned_cols=213 Identities=18% Similarity=0.188 Sum_probs=145.9
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhc
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLRE 88 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~ 88 (304)
.+|++|+||++||.. +.+.+||.++.+|+++.. ++++|||||+|++.+.+.... ...........|.|++++.|.
T Consensus 1 ~~~~i~~iiv~yn~~-~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~~--~~~v~~i~~~~NlG~agg~n~ 75 (305)
T COG1216 1 SMPKISIIIVTYNRG-EDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKARF--FPNVRLIENGENLGFAGGFNR 75 (305)
T ss_pred CCcceEEEEEecCCH-HHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhhc--CCcEEEEEcCCCccchhhhhH
Confidence 368999999999999 999999999999998754 777899999999887554332 223233334568999999999
Q ss_pred cccccCCc---EEEEecCCcccccccc----------cceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCC
Q psy736 89 KNRHKKTV---VCPIIDVISDQTFEYI----------TAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVP 155 (304)
Q Consensus 89 g~~~A~gd---~l~flD~D~~~~~~~l----------~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (304)
|++.|.++ |+++||+|+.+.++.| ....++.+.+...+....... .++........+...+
T Consensus 76 g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 149 (305)
T COG1216 76 GIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESLYIDR------RGGESDGLTGGWRASP 149 (305)
T ss_pred HHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCcchhe------eccccccccccceecc
Confidence 99888776 9999999998888555 122333343322222111111 1100000001111111
Q ss_pred hhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccCCCC
Q psy736 156 PREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRDKSP 235 (304)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~~~~ 235 (304)
...... ...........+.|++++++|++|+++|||||+|++| +||+|+|+|++++|+++.++|.+.+.|....+..
T Consensus 150 ~~~~~~--~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y-~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s~~ 226 (305)
T COG1216 150 LLEIAP--DLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIY-YEDVDLCLRARKAGYKIYYVPDAIIYHKIGSSKG 226 (305)
T ss_pred cccccc--cccchhhhhhhcceeeeEEcHHHHHHhCCCCccccee-ehHHHHHHHHHHcCCeEEEeeccEEEEeccCCCC
Confidence 000000 0000111112478999999999999999999999998 7999999999999999999999999998876543
No 7
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.97 E-value=2e-30 Score=218.43 Aligned_cols=173 Identities=14% Similarity=0.141 Sum_probs=128.7
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcccc-ceee-cccCCCc---HHHH
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFE-YITA-SDMTWGG---FNWK 85 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~-~i~~-~~~~~~G---~~~a 85 (304)
|.||||||+||++ +.|.+||+|+++|++++ +|||||||+|+|+|.++++.+...... .++. ....+.| .+.+
T Consensus 1 p~vsviip~~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 77 (196)
T cd02520 1 PGVSILKPLCGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNN 77 (196)
T ss_pred CCeEEEEecCCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHH
Confidence 7899999999999 99999999999999876 599999999999999988877654332 1211 1122323 4567
Q ss_pred HhccccccCCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCC
Q psy736 86 LREKNRHKKTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGD 165 (304)
Q Consensus 86 ~n~g~~~A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
+|.|++.|+|||++|+|+|+.++|++|. .++.. +.... .. ..++.
T Consensus 78 ~n~g~~~a~~d~i~~~D~D~~~~~~~l~--~l~~~----~~~~~------~~-~v~~~---------------------- 122 (196)
T cd02520 78 LIKGYEEARYDILVISDSDISVPPDYLR--RMVAP----LMDPG------VG-LVTCL---------------------- 122 (196)
T ss_pred HHHHHHhCCCCEEEEECCCceEChhHHH--HHHHH----hhCCC------CC-eEEee----------------------
Confidence 8899999999999999999999887771 11111 00000 00 00000
Q ss_pred CCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeec
Q psy736 166 RSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVF 230 (304)
Q Consensus 166 ~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~ 230 (304)
...|+++++||++|+++|||++.... .+||+||++|+.++|+++.+.|.+.++|..
T Consensus 123 --------~~~g~~~~~r~~~~~~~ggf~~~~~~-~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~ 178 (196)
T cd02520 123 --------CAFGKSMALRREVLDAIGGFEAFADY-LAEDYFLGKLIWRLGYRVVLSPYVVMQPLG 178 (196)
T ss_pred --------cccCceeeeEHHHHHhccChHHHhHH-HHHHHHHHHHHHHcCCeEEEcchheeccCC
Confidence 34578899999999999999863333 379999999999999999999998766643
No 8
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=5.3e-30 Score=220.86 Aligned_cols=208 Identities=13% Similarity=0.078 Sum_probs=135.4
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccc
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKN 90 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~ 90 (304)
|+||||||+||++.+.|.+||+|+++|++++..+|||||||||+|+|.++++.+.......+...+...+|.+.++|.|+
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 80 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNRHAKAGNLNNAL 80 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhcccCceEEEeCCCCCCcHHHHHHHH
Confidence 78999999999852578999999999999863369999999999999999888765331112222222344577899999
Q ss_pred cccCCcEEEEecCCcccccccccce--eeee-ceeeeeCCCceeeeccCC-ceecccccCCCcccccCChhhhhhcCCCC
Q psy736 91 RHKKTVVCPIIDVISDQTFEYITAK--TVVC-PIIDVISDQTFEYITASD-MTWGGFNWKLNFRWYRVPPREMMRRGGDR 166 (304)
Q Consensus 91 ~~A~gd~l~flD~D~~~~~~~l~~~--~~~~-~~i~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
++|+|||++|+|+|+.++|+++... .+.. +.+..+............ .....+... .. ..... ... .
T Consensus 81 ~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~-~~~----~ 151 (234)
T cd06421 81 AHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNE--QE--LFYGV-IQP----G 151 (234)
T ss_pred HhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHH--HH--HHHHH-HHH----H
Confidence 9999999999999999999766100 0000 111111111000000000 000000000 00 00000 000 0
Q ss_pred CCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeec
Q psy736 167 SSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVF 230 (304)
Q Consensus 167 ~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~ 230 (304)
..........|+++++||++|+++||||+.+. +||++|++|++++|+++.+.|.+.+.|..
T Consensus 152 ~~~~~~~~~~g~~~~~r~~~~~~ig~~~~~~~---~eD~~l~~r~~~~g~~i~~~~~~~~~~~~ 212 (234)
T cd06421 152 RDRWGAAFCCGSGAVVRREALDEIGGFPTDSV---TEDLATSLRLHAKGWRSVYVPEPLAAGLA 212 (234)
T ss_pred HhhcCCceecCceeeEeHHHHHHhCCCCccce---eccHHHHHHHHHcCceEEEecCccccccC
Confidence 00112445678999999999999999998753 69999999999999999999999887653
No 9
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.96 E-value=8.9e-30 Score=221.34 Aligned_cols=205 Identities=11% Similarity=0.081 Sum_probs=132.1
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeecccCCCcHHHHHhcc
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASDMTWGGFNWKLREK 89 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~~~~~G~~~a~n~g 89 (304)
|.+|||||+||++ +.|.+||+|+++|++++..+|||||||+|+|+|.++++.+... ..+.+...+..+.|++.|+|.|
T Consensus 1 p~vsIiIp~~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~g 79 (241)
T cd06427 1 PVYTILVPLYKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQPRTKPKACNYA 79 (241)
T ss_pred CeEEEEEecCCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCCCchHHHHHHH
Confidence 7899999999999 9999999999999987545799999999999999988876432 1222222233467999999999
Q ss_pred ccccCCcEEEEecCCccccccccccee--ee--eceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCC
Q psy736 90 NRHKKTVVCPIIDVISDQTFEYITAKT--VV--CPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGD 165 (304)
Q Consensus 90 ~~~A~gd~l~flD~D~~~~~~~l~~~~--~~--~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
+++|+||||+|+|+|+.++|+++.... +. .+.+..+.... ............. ....+... . ...... ..
T Consensus 80 ~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~-~-~~~~~~--~~ 153 (241)
T cd06427 80 LAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPL-NYYNARENWLTRM-FALEYAAW-F-DYLLPG--LA 153 (241)
T ss_pred HHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCce-EeeCCCccHHHHH-HHHHHHHH-H-HHHHHH--HH
Confidence 999999999999999999997661000 00 01111111000 0000000000000 00000000 0 000000 00
Q ss_pred CCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEE
Q psy736 166 RSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVG 227 (304)
Q Consensus 166 ~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~ 227 (304)
.. . ......|+++++||++|+++||||+.. + +||.||++|+.+.|+++.+.|...+.
T Consensus 154 ~~-~-~~~~~~g~~~~~rr~~~~~vgg~~~~~--~-~eD~~l~~rl~~~G~r~~~~~~~~~~ 210 (241)
T cd06427 154 RL-G-LPIPLGGTSNHFRTDVLRELGGWDPFN--V-TEDADLGLRLARAGYRTGVLNSTTLE 210 (241)
T ss_pred hc-C-CeeecCCchHHhhHHHHHHcCCCCccc--c-hhhHHHHHHHHHCCceEEEecccccc
Confidence 00 0 112345788899999999999999842 3 69999999999999999999876543
No 10
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.96 E-value=7.9e-29 Score=232.34 Aligned_cols=210 Identities=15% Similarity=0.095 Sum_probs=142.6
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
...|++|||||+|||+ +.+.+|++|+++|++++ +|||||||||+|+|.++++++..+..+.......+|.|++.++|
T Consensus 51 ~~~p~vsViIp~yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n~Gka~aln 127 (420)
T PRK11204 51 KEYPGVSILVPCYNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAENQGKANALN 127 (420)
T ss_pred CCCCCEEEEEecCCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCCCCHHHHHH
Confidence 3468899999999999 99999999999999884 49999999999999999888766543322222255889999999
Q ss_pred ccccccCCcEEEEecCCcccccccccce--ee-eeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCC
Q psy736 88 EKNRHKKTVVCPIIDVISDQTFEYITAK--TV-VCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGG 164 (304)
Q Consensus 88 ~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
.|++.|+||+++++|+|+.++|+.+... .+ ..|.+..+........+. ...+..... .+.. ........
T Consensus 128 ~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~~--~~~~~~~~~-~~~~-~~~~~~~~---- 199 (420)
T PRK11204 128 TGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNRS--TLLGRIQVG-EFSS-IIGLIKRA---- 199 (420)
T ss_pred HHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccch--hHHHHHHHH-HHHH-hhhHHHHH----
Confidence 9999999999999999999999766100 00 112222221110000000 000000000 0000 00000000
Q ss_pred CCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccC
Q psy736 165 DRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRD 232 (304)
Q Consensus 165 ~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~ 232 (304)
.........++|+++++||++++++||||+++. .||.|+++|+.++|+++.|.|++.+.|..+.
T Consensus 200 -~~~~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~ 263 (420)
T PRK11204 200 -QRVYGRVFTVSGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYEPRALCWILMPE 263 (420)
T ss_pred -HHHhCCceEecceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEeccccEEEeECcc
Confidence 000012334578999999999999999999863 6999999999999999999999999886543
No 11
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.96 E-value=7.4e-29 Score=209.12 Aligned_cols=194 Identities=19% Similarity=0.196 Sum_probs=127.8
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCch-HHHHHHhhccccceeecccCCCcHHHHHhcc
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVC-PIIDVISDQTFEYITASDMTWGGFNWKLREK 89 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~-~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g 89 (304)
|++|||||+||++.+.|.+||+|+++|++++ +|||||||||+|++. .+++.+..............+.|++.++|.|
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g 78 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSA 78 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccCCCHHHHHHHH
Confidence 6899999999996589999999999999874 499999999999854 4445443332222222334578999999999
Q ss_pred ccccCCcEEEEecCCcccccccccce--ee-eeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCC
Q psy736 90 NRHKKTVVCPIIDVISDQTFEYITAK--TV-VCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDR 166 (304)
Q Consensus 90 ~~~A~gd~l~flD~D~~~~~~~l~~~--~~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
++.|+|||++|+|+|+.+.|+++... .+ ..+..+.+-..... .. ..+........ .......
T Consensus 79 ~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~----~~--~~~~~~~~~~~-~~~~~~~-------- 143 (202)
T cd04184 79 LELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDK----ID--EGGKRSEPFFK-PDWSPDL-------- 143 (202)
T ss_pred HHhhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHh----cc--CCCCEeccccC-CCCCHHH--------
Confidence 99999999999999999999666100 00 11111111000000 00 00000000000 0000000
Q ss_pred CCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEE
Q psy736 167 SSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHV 226 (304)
Q Consensus 167 ~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v 226 (304)
.......++++++||++|+++||||+++. ++||+||++|++++|+++.+.|++.+
T Consensus 144 ---~~~~~~~~~~~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~~~~~ 198 (202)
T cd04184 144 ---LLSQNYIGHLLVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIPRVLY 198 (202)
T ss_pred ---hhhcCCccceEeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEccHhhh
Confidence 01112345677899999999999999875 57999999999999999999998543
No 12
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.96 E-value=1.5e-28 Score=203.83 Aligned_cols=179 Identities=19% Similarity=0.147 Sum_probs=129.3
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc-cceeec-ccCCCcHHHHHhccccc
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF-EYITAS-DMTWGGFNWKLREKNRH 92 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~-~~i~~~-~~~~~G~~~a~n~g~~~ 92 (304)
||||+||++ +.|.+||+|+.+|++++ +|||||||||+|+|.++++.+..... ..+... ...+.|.+.++|.|++.
T Consensus 1 ivip~~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~ 77 (182)
T cd06420 1 LIITTYNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAA 77 (182)
T ss_pred CEEeecCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHH
Confidence 699999999 99999999999999764 49999999999999998887765321 122222 22234678899999999
Q ss_pred cCCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCcccc
Q psy736 93 KKTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSPLRT 172 (304)
Q Consensus 93 A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
|+|||++|||+|+.++++++.. .+........ ..|+. .. ... .. ..
T Consensus 78 a~g~~i~~lD~D~~~~~~~l~~------~~~~~~~~~~--------v~g~~-------~~-~~~--------~~----~~ 123 (182)
T cd06420 78 AKGDYLIFIDGDCIPHPDFIAD------HIELAEPGVF--------LSGSR-------VL-LNE--------KL----TE 123 (182)
T ss_pred hcCCEEEEEcCCcccCHHHHHH------HHHHhCCCcE--------Eecce-------ee-ccc--------cc----ce
Confidence 9999999999999999877611 1111111110 00000 00 000 00 01
Q ss_pred ccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCe-EEEEeccEEEeec
Q psy736 173 PTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGI-LEIIPCSHVGHVF 230 (304)
Q Consensus 173 ~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~-i~~~p~~~v~H~~ 230 (304)
....|++++++|+.|.++||||+.+..||+||+||++|++++|++ ..+.|.+.++|.+
T Consensus 124 ~~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h~~ 182 (182)
T cd06420 124 RGIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFHLW 182 (182)
T ss_pred eEeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeeecC
Confidence 344578899999999999999999988889999999999999955 5555688888864
No 13
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.96 E-value=4.7e-29 Score=234.62 Aligned_cols=218 Identities=16% Similarity=0.099 Sum_probs=141.7
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
...|++|||||+||++ +.|.+||+|+.+|++++...|||||||||+|+|.++++++.+..........+++.|++.|+|
T Consensus 46 ~~~P~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~~~Gka~AlN 124 (439)
T TIGR03111 46 GKLPDITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNSDQGKAKALN 124 (439)
T ss_pred CCCCCEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCCCCCHHHHHH
Confidence 5689999999999999 999999999999999865569999999999999998887766543322122234789999999
Q ss_pred ccccccCCcEEEEecCCcccccccccce--ee-eeceeeeeCCCceeeeccCCceecccccCC-CcccccCChhhhhhcC
Q psy736 88 EKNRHKKTVVCPIIDVISDQTFEYITAK--TV-VCPIIDVISDQTFEYITASDMTWGGFNWKL-NFRWYRVPPREMMRRG 163 (304)
Q Consensus 88 ~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 163 (304)
.|++.++|||++++|+|+.++|+.+... .+ ..|.+..+.+.............+.+.... ..............+
T Consensus 125 ~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~r- 203 (439)
T TIGR03111 125 AAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQAFLAGR- 203 (439)
T ss_pred HHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHHHHhhh-
Confidence 9999999999999999999999666100 00 011111111000000000000000000000 000000000000000
Q ss_pred CCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHH-HcCCeEEEEeccEEEeec
Q psy736 164 GDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVW-QCGGILEIIPCSHVGHVF 230 (304)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~-~~G~~i~~~p~~~v~H~~ 230 (304)
...........++|+++++||++++++||||++.. +||.|+++|++ +.|+++.+.|++.++|..
T Consensus 204 ~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~ 268 (439)
T TIGR03111 204 NFESQVNSLFTLSGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYLCENAIFYVDP 268 (439)
T ss_pred HHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEECCCCEEEEEC
Confidence 00000112345678999999999999999998762 69999999997 569999999999998864
No 14
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.96 E-value=5e-29 Score=230.75 Aligned_cols=203 Identities=17% Similarity=0.185 Sum_probs=135.4
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc--cceeecc-----cCCC
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF--EYITASD-----MTWG 80 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~--~~i~~~~-----~~~~ 80 (304)
+..|+||||||+||++ +.|.+||+|+++|++++ .+|||||||+|+|+|.++++++.++.. ..++.+. ..+.
T Consensus 37 ~~~p~VSVIIpa~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~ 114 (384)
T TIGR03469 37 EAWPAVVAVVPARNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWS 114 (384)
T ss_pred CCCCCEEEEEecCCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCc
Confidence 4689999999999999 99999999999999874 369999999999999999988765432 1222222 2235
Q ss_pred cHHHHHhccccccC-----CcEEEEecCCccccccccc---------ceeeeeceeeeeCCCceeeeccCCceecccccC
Q psy736 81 GFNWKLREKNRHKK-----TVVCPIIDVISDQTFEYIT---------AKTVVCPIIDVISDQTFEYITASDMTWGGFNWK 146 (304)
Q Consensus 81 G~~~a~n~g~~~A~-----gd~l~flD~D~~~~~~~l~---------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~ 146 (304)
|+..|+|.|+++|+ ||+++|+|+|+.++|+++. ...++.+...... ..+.. ......+...
T Consensus 115 Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs~~~~~~~-~~~~~----~~~~~~~~~~ 189 (384)
T TIGR03469 115 GKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVSLMVRLRC-ESFWE----KLLIPAFVFF 189 (384)
T ss_pred chHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEEecccccC-CCHHH----HHHHHHHHHH
Confidence 88899999999999 9999999999999997761 0111111100000 00000 0000000000
Q ss_pred CCcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEE
Q psy736 147 LNFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHV 226 (304)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v 226 (304)
+.. ..+. ... .+.. .......|+|+++||++|+++||||+....+ .||++|+.|+.++|+++.+.+....
T Consensus 190 --~~~-~~~~---~~~-~~~~--~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~-~ED~~L~~r~~~~G~~v~~~~~~~~ 259 (384)
T TIGR03469 190 --FQK-LYPF---RWV-NDPR--RRTAAAAGGCILIRREALERIGGIAAIRGAL-IDDCTLAAAVKRSGGRIWLGLAART 259 (384)
T ss_pred --HHH-hcch---hhh-cCCC--ccceeecceEEEEEHHHHHHcCCHHHHhhCc-ccHHHHHHHHHHcCCcEEEEecCce
Confidence 000 0000 000 0111 1234567999999999999999999865543 6999999999999999999776544
Q ss_pred E
Q psy736 227 G 227 (304)
Q Consensus 227 ~ 227 (304)
.
T Consensus 260 ~ 260 (384)
T TIGR03469 260 R 260 (384)
T ss_pred E
Confidence 3
No 15
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.96 E-value=4.1e-28 Score=210.72 Aligned_cols=208 Identities=17% Similarity=0.061 Sum_probs=138.2
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccc
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNR 91 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~ 91 (304)
++|||||+||++ +.|.++|+|+.+|+++...+|||||||||+|+|.++++.+.+... .+.....++.|.+.++|.|++
T Consensus 1 ~~sIiip~~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~~~~~-~v~~i~~~~~~~~~a~N~g~~ 78 (249)
T cd02525 1 FVSIIIPVRNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYAAKDP-RIRLIDNPKRIQSAGLNIGIR 78 (249)
T ss_pred CEEEEEEcCCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHHhcCC-eEEEEeCCCCCchHHHHHHHH
Confidence 489999999999 999999999999988544569999999999999999888876532 233444456788999999999
Q ss_pred ccCCcEEEEecCCcccccccccce--eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCc
Q psy736 92 HKKTVVCPIIDVISDQTFEYITAK--TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSP 169 (304)
Q Consensus 92 ~A~gd~l~flD~D~~~~~~~l~~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
.|++||++|+|+|+.+.|+++... ....+....+........ .........+..... ....... ......
T Consensus 79 ~a~~d~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~ 150 (249)
T cd02525 79 NSRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETIG--ESKFQKAIAVAQSSP-LGSGGSA-----YRGGAV 150 (249)
T ss_pred HhCCCEEEEECCCccCCHHHHHHHHHHHhcCCCCEEecceecCC--CChHHHHHHHHhhch-hccCCcc-----cccccc
Confidence 999999999999999998666100 000000000000000000 000000000000000 0000000 000000
Q ss_pred cccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeecc
Q psy736 170 LRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFR 231 (304)
Q Consensus 170 ~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r 231 (304)
.......|++++++|++|+++||||+.+.. +||.||++|++++|+++.+.|.+.+.|..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~ 210 (249)
T cd02525 151 KIGYVDTVHHGAYRREVFEKVGGFDESLVR--NEDAELNYRLRKAGYKIWLSPDIRVYYYPR 210 (249)
T ss_pred ccccccccccceEEHHHHHHhCCCCcccCc--cchhHHHHHHHHcCcEEEEcCCeEEEEcCC
Confidence 002234678889999999999999999753 699999999999999999999999988754
No 16
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.96 E-value=2.9e-28 Score=229.73 Aligned_cols=208 Identities=13% Similarity=0.072 Sum_probs=140.4
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhc
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLRE 88 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~ 88 (304)
..|.+|||||+|||+ ..+.+||+|+++|++++ +|||||||||+|+|.++++++.++..+........|.|++.++|.
T Consensus 73 ~~p~vsViIP~yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n~Gka~AlN~ 149 (444)
T PRK14583 73 GHPLVSILVPCFNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHNQGKAIALRM 149 (444)
T ss_pred CCCcEEEEEEeCCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCCCCHHHHHHH
Confidence 368899999999999 99999999999999985 499999999999999988887654432211222457899999999
Q ss_pred cccccCCcEEEEecCCcccccccccce---eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCC
Q psy736 89 KNRHKKTVVCPIIDVISDQTFEYITAK---TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGD 165 (304)
Q Consensus 89 g~~~A~gd~l~flD~D~~~~~~~l~~~---~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
|++.|+|||++++|+|+.++|+.+... ....|.+..+........ . ....+... ......... ..... ..
T Consensus 150 gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~-~-~~~~~~~~---~~e~~~~~~-~~~~~-~~ 222 (444)
T PRK14583 150 GAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRT-R-STLIGRVQ---VGEFSSIIG-LIKRT-QR 222 (444)
T ss_pred HHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecC-C-CcchhhHH---HHHHHHHHH-HHHHH-HH
Confidence 999999999999999999999666100 000121211111100000 0 00000000 000000000 00000 00
Q ss_pred CCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeecc
Q psy736 166 RSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFR 231 (304)
Q Consensus 166 ~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r 231 (304)
. .......+|+++++||++++++||||+++. .||.|+++|+.++|+++.|.|++.+++...
T Consensus 223 ~--~g~~~~~sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~p~a~~~~~~p 283 (444)
T PRK14583 223 V--YGQVFTVSGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFEPRGLCWILMP 283 (444)
T ss_pred H--hCCceEecCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEeeccEEeeeCC
Confidence 0 012334578999999999999999999863 699999999999999999999999887643
No 17
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.96 E-value=5.1e-28 Score=204.32 Aligned_cols=176 Identities=16% Similarity=0.105 Sum_probs=129.4
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccc--
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRH-- 92 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~-- 92 (304)
||||+||++ +.|.+||+|+++|++++ +|||||||||+|+|.++++.+..... ........|.|.+.++|.|+..
T Consensus 1 viI~~~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~g~~~~~n~~~~~a~ 76 (202)
T cd04185 1 AVVVTYNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPENLGGAGGFYEGVRRAY 76 (202)
T ss_pred CEEEeeCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhcCCCc-eEEEECccccchhhHHHHHHHHHh
Confidence 699999999 99999999999999874 49999999999999998887765432 1112233477888888888765
Q ss_pred -cCCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCccc
Q psy736 93 -KKTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSPLR 171 (304)
Q Consensus 93 -A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
+++||++|+|+|+.++|+++.. ++ ......... ..++. .. .. +.
T Consensus 77 ~~~~d~v~~ld~D~~~~~~~l~~--l~----~~~~~~~~~-------~~~~~------~~--~~---------~~----- 121 (202)
T cd04185 77 ELGYDWIWLMDDDAIPDPDALEK--LL----AYADKDNPQ-------FLAPL------VL--DP---------DG----- 121 (202)
T ss_pred ccCCCEEEEeCCCCCcChHHHHH--HH----HHHhcCCce-------Eecce------eE--cC---------CC-----
Confidence 4799999999999999877611 00 001000000 00000 00 00 00
Q ss_pred cccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccCCCC
Q psy736 172 TPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRDKSP 235 (304)
Q Consensus 172 ~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~~~~ 235 (304)
.+++++++|++|+++|+||+.+..+ +||+|+++|+.++|+++ +.|.+.+.|....+..
T Consensus 122 ----~~~~~~~~~~~~~~~g~~~~~~~~~-~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~~~ 179 (202)
T cd04185 122 ----SFVGVLISRRVVEKIGLPDKEFFIW-GDDTEYTLRASKAGPGI-YVPDAVVVHKTAINKG 179 (202)
T ss_pred ----ceEEEEEeHHHHHHhCCCChhhhcc-chHHHHHHHHHHcCCcE-EecceEEEEccccccc
Confidence 2356889999999999999998776 59999999999999999 9999999998765443
No 18
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.96 E-value=2.1e-28 Score=217.43 Aligned_cols=215 Identities=18% Similarity=0.119 Sum_probs=131.2
Q ss_pred EEEEEeeCCCh-----HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc-c-ceeecc-cCCCcHHHH
Q psy736 14 SIVIVFHNEAW-----STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF-E-YITASD-MTWGGFNWK 85 (304)
Q Consensus 14 SIIIp~yN~~~-----~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~-~-~i~~~~-~~~~G~~~a 85 (304)
|||||++|+.. +.|..||.++.+++.+ ..+|||||||||++.+.+.+..+.+... . ++.... ...-|+++|
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~-~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~~f~~a~a 79 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSD-PDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGEPFSRAKA 79 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCCCcCHHHH
Confidence 79999999971 2456667776664333 3569999999999997666666655432 2 333222 112388999
Q ss_pred HhccccccCCcEEEEecCCcccccccccceeeeeceeeeeC--CCceeee-ccCCceecccccCCCcccccCChhhhhhc
Q psy736 86 LREKNRHKKTVVCPIIDVISDQTFEYITAKTVVCPIIDVIS--DQTFEYI-TASDMTWGGFNWKLNFRWYRVPPREMMRR 162 (304)
Q Consensus 86 ~n~g~~~A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
+|.|++.|+||+|+|+|+|+.++|+.+.... . .+..+. ...+... ..+....+.... ................
T Consensus 80 rN~g~~~A~~d~l~flD~D~i~~~~~i~~~~--~-~~~~l~~~~~~~~~~p~~yl~~~~~~~~-~~~~~~~~~~~~~~~~ 155 (281)
T PF10111_consen 80 RNIGAKYARGDYLIFLDADCIPSPDFIEKLL--N-HVKKLDKNPNAFLVYPCLYLSEEGSEKF-YSQFKNLWDHEFLESF 155 (281)
T ss_pred HHHHHHHcCCCEEEEEcCCeeeCHHHHHHHH--H-HHHHHhcCCCceEEEeeeeccchhhHHH-hhcchhcchHHHHHHH
Confidence 9999999999999999999999996651000 0 000000 0000000 000000000000 0000000000000000
Q ss_pred CCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccCC
Q psy736 163 GGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRDK 233 (304)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~~ 233 (304)
..............|+|++++|+.|.++|||||+|..||+||.||++|+.++|..+...|...+.|..+.+
T Consensus 156 ~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~~~~ 226 (281)
T PF10111_consen 156 ISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSHRWP 226 (281)
T ss_pred hhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhcccccCCC
Confidence 00011111223445799999999999999999999999999999999999999999999999988875543
No 19
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.95 E-value=6.9e-28 Score=202.15 Aligned_cols=194 Identities=18% Similarity=0.148 Sum_probs=133.8
Q ss_pred EEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc
Q psy736 14 SIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK 93 (304)
Q Consensus 14 SIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A 93 (304)
|||||+||++ +.|.+||.|+++|++++ +|||||||||+|+|.++++.+... .+.....++.|++.++|.|++.|
T Consensus 1 sivi~~~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~~~~---~~~~~~~~~~g~~~a~n~~~~~a 74 (202)
T cd06433 1 SIITPTYNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKYEDK---ITYWISEPDKGIYDAMNKGIALA 74 (202)
T ss_pred CEEEeccchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHhHhh---cEEEEecCCcCHHHHHHHHHHHc
Confidence 7999999999 99999999999999875 599999999999999888876554 22333456889999999999999
Q ss_pred CCcEEEEecCCcccccccccce---eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCcc
Q psy736 94 KTVVCPIIDVISDQTFEYITAK---TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSPL 170 (304)
Q Consensus 94 ~gd~l~flD~D~~~~~~~l~~~---~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
+|||++|+|+|+.+.++.+... ....+..+.+........+. + ....... ..... .....
T Consensus 75 ~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~------~--~~~~~~~-~~~~~--------~~~~~ 137 (202)
T cd06433 75 TGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDEN------G--RVIGRRR-PPPFL--------DKFLL 137 (202)
T ss_pred CCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCC------C--CcccCCC-Ccchh--------hhHHh
Confidence 9999999999999998665110 00011111111110000000 0 0000000 00000 00001
Q ss_pred ccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccC
Q psy736 171 RTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRD 232 (304)
Q Consensus 171 ~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~ 232 (304)
....+.+++++++|++|+++|+||+.+.. +||.||++|+++.|+++.+.|...+.|..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~D~~~~~r~~~~g~~~~~~~~~~~~~~~~~ 197 (202)
T cd06433 138 YGMPICHQATFFRRSLFEKYGGFDESYRI--AADYDLLLRLLLAGKIFKYLPEVLAAFRLGG 197 (202)
T ss_pred hcCcccCcceEEEHHHHHHhCCCchhhCc--hhhHHHHHHHHHcCCceEecchhhhhheecC
Confidence 12234566788999999999999999863 5899999999999999999998887765543
No 20
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.95 E-value=5.3e-28 Score=207.02 Aligned_cols=195 Identities=15% Similarity=0.175 Sum_probs=129.3
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcccc-ceeec-----ccCCCcHHHHHhc
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFE-YITAS-----DMTWGGFNWKLRE 88 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~-~i~~~-----~~~~~G~~~a~n~ 88 (304)
||||+||++ +.|.+||+|+++|++++ .+|||||||||+|+|.++++.+..+... .+... ...+.|++.++|.
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~ 78 (219)
T cd06913 1 IILPVHNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQ 78 (219)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHH
Confidence 699999999 99999999999999863 3599999999999999999887654221 12111 2235799999999
Q ss_pred cccccCCcEEEEecCCccccccccc---------ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccc-cCChhh
Q psy736 89 KNRHKKTVVCPIIDVISDQTFEYIT---------AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWY-RVPPRE 158 (304)
Q Consensus 89 g~~~A~gd~l~flD~D~~~~~~~l~---------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 158 (304)
|++.|+|||++|||+|+.+.|+++. ...++.+......... ...+ .++. ......
T Consensus 79 g~~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~----------~~~~-----~~~~~~~~~~~ 143 (219)
T cd06913 79 AIAQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPNSIIGCQVRRIPEDS----------TERY-----TRWINTLTREQ 143 (219)
T ss_pred HHHhcCCCEEEEECCCccCChhHHHHHHHHHHhCCCcEEEEEEEecCccc----------chhh-----HHHHHhcCHHH
Confidence 9999999999999999999986651 1111111110000000 0000 0000 011100
Q ss_pred hhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeecc
Q psy736 159 MMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFR 231 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r 231 (304)
......... .+......+++||++|+++|||||.+..+ +||+||++|+.++|+++.+.|...+.+..+
T Consensus 144 ~~~~~~~~~----~~~~~~~~~~~rr~~~~~~g~f~~~~~~~-~eD~~l~~r~~~~g~~i~~~~~~~~~yr~~ 211 (219)
T cd06913 144 LLTQVYTSH----GPTVIMPTWFCSREWFSHVGPFDEGGKGV-PEDLLFFYEHLRKGGGVYRVDRCLLLYRYH 211 (219)
T ss_pred HHHHHHhhc----CCccccccceeehhHHhhcCCccchhccc-hhHHHHHHHHHHcCCceEEEcceeeeeeec
Confidence 000000000 01112233679999999999999987554 699999999999999999999987765443
No 21
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.95 E-value=8.4e-28 Score=207.84 Aligned_cols=202 Identities=14% Similarity=0.048 Sum_probs=127.7
Q ss_pred EEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCch-HHHHHHhhccccceeec-ccCCCcH-HHHHhccc
Q psy736 14 SIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVC-PIIDVISDQTFEYITAS-DMTWGGF-NWKLREKN 90 (304)
Q Consensus 14 SIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~-~ii~~~~~~~~~~i~~~-~~~~~G~-~~a~n~g~ 90 (304)
|||||+||++.+.|.+||+|+.+|++++. |||||||+|+|+|. ++++.+.......+... ...+.|. +.++|.|+
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~--eiiVvdd~s~D~t~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~ 78 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNF--EVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYAL 78 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCc--EEEEEeCCCCchhHHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHH
Confidence 79999999962589999999999998754 99999999999975 55555543322222222 2234564 88999999
Q ss_pred cccC--CcEEEEecCCcccccccccce--eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCC
Q psy736 91 RHKK--TVVCPIIDVISDQTFEYITAK--TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDR 166 (304)
Q Consensus 91 ~~A~--gd~l~flD~D~~~~~~~l~~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
+.++ +||++|+|+|+.++|++|... .+..+.++.+........+. .. .+... ..+ .. ...... ....
T Consensus 79 ~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~-~~---~~~~~--~~~-~~-~~~~~~-~~~~ 149 (236)
T cd06435 79 ERTAPDAEIIAVIDADYQVEPDWLKRLVPIFDDPRVGFVQAPQDYRDGE-ES---LFKRM--CYA-EY-KGFFDI-GMVS 149 (236)
T ss_pred HhcCCCCCEEEEEcCCCCcCHHHHHHHHHHhcCCCeeEEecCccccCCC-cc---HHHHH--HhH-HH-HHHHHH-Hhcc
Confidence 9876 699999999999999776100 01112222221110000000 00 00000 000 00 000000 0000
Q ss_pred CCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 167 SSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 167 ~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
..........|+++++||++|+++||||+.+ .+||+||++|+.+.|+++.+.|++.++|.
T Consensus 150 ~~~~~~~~~~g~~~~~rr~~~~~iGgf~~~~---~~eD~dl~~r~~~~G~~~~~~~~~~~~~~ 209 (236)
T cd06435 150 RNERNAIIQHGTMCLIRRSALDDVGGWDEWC---ITEDSELGLRMHEAGYIGVYVAQSYGHGL 209 (236)
T ss_pred ccccCceEEecceEEEEHHHHHHhCCCCCcc---ccchHHHHHHHHHCCcEEEEcchhhccCc
Confidence 0111233456888999999999999999986 26999999999999999999999876553
No 22
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=9.5e-28 Score=206.36 Aligned_cols=205 Identities=18% Similarity=0.210 Sum_probs=115.7
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcccc-ceeeccc-CCC---cHHHH
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFE-YITASDM-TWG---GFNWK 85 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~-~i~~~~~-~~~---G~~~a 85 (304)
|.||||||+||+. +.|.+||+|+++|++++ +||+||||+|+|+|.+.++.+...... .++.+.. .+. |+..+
T Consensus 1 P~v~Vvip~~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a 77 (228)
T PF13641_consen 1 PRVSVVIPAYNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALAARYPRVRVRVIRRPRNPGPGGKARA 77 (228)
T ss_dssp --EEEE--BSS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHHHTTGG-GEEEEE----HHHHHHHHH
T ss_pred CEEEEEEEecCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHHHHcCCCceEEeecCCCCCcchHHHH
Confidence 7899999999998 99999999999998754 599999999999999888877665443 2333322 223 47889
Q ss_pred HhccccccCCcEEEEecCCcccccccccc--eeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcC
Q psy736 86 LREKNRHKKTVVCPIIDVISDQTFEYITA--KTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRG 163 (304)
Q Consensus 86 ~n~g~~~A~gd~l~flD~D~~~~~~~l~~--~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
+|.+++++++|+++|+|+|+.++|++|.. ..+..+.+..+........+ ........ ...+.......
T Consensus 78 ~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~------- 147 (228)
T PF13641_consen 78 LNEALAAARGDYILFLDDDTVLDPDWLERLLAAFADPGVGAVGGPVFPDND--RNWLTRLQ-DLFFARWHLRF------- 147 (228)
T ss_dssp HHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHHHBSS--EEEEEEEETTC--CCEEEE-T-T--S-EETTTS-------
T ss_pred HHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHHHhCCCCeEeeeEeecCC--CCHHHHHH-HHHHhhhhhhh-------
Confidence 99999999999999999999999966611 00011221111111100000 00000000 00000000000
Q ss_pred CCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeecc
Q psy736 164 GDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFR 231 (304)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r 231 (304)
...........+.|+++++||++|+++||||+ + .. +||.||+.|++++|+++.+.|++.+.|..+
T Consensus 148 ~~~~~~~~~~~~~G~~~~~rr~~~~~~g~fd~-~-~~-~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~ 212 (228)
T PF13641_consen 148 RSGRRALGVAFLSGSGMLFRRSALEEVGGFDP-F-IL-GEDFDLCLRLRAAGWRIVYAPDALVYHEEP 212 (228)
T ss_dssp -TT-B----S-B--TEEEEEHHHHHHH-S--S-S-SS-SHHHHHHHHHHHTT--EEEEEEEEEEE--S
T ss_pred hhhhcccceeeccCcEEEEEHHHHHHhCCCCC-C-Cc-ccHHHHHHHHHHCCCcEEEECCcEEEEeCC
Confidence 00111223455678999999999999999999 3 33 599999999999999999999999999854
No 23
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.95 E-value=6.9e-28 Score=203.15 Aligned_cols=195 Identities=14% Similarity=0.148 Sum_probs=127.7
Q ss_pred EEEEEeeCCC-hHHHHHHHHHHHhcCCCCCcceEEEEeCCC-CCCchHHHHHHhhccccceeecccCCCcHHHHHhcccc
Q psy736 14 SIVIVFHNEA-WSTLLRTVWSVINRSPRTLLKEIILVDDAS-ERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNR 91 (304)
Q Consensus 14 SIIIp~yN~~-~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS-~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~ 91 (304)
|||||+||++ .+.|.+||+|+++|++++ .||||||||| +|+|.++++.+.++.. ........|.|++.++|.|++
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n~G~~~a~N~g~~ 77 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKNRGLGKALNEGLK 77 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCccccHHHHHHHHHH
Confidence 7999999986 138999999999999874 4999999998 6778888887766433 212223457899999999999
Q ss_pred ccCCcEEEEecCCcccccccccce--ee-eeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCC
Q psy736 92 HKKTVVCPIIDVISDQTFEYITAK--TV-VCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSS 168 (304)
Q Consensus 92 ~A~gd~l~flD~D~~~~~~~l~~~--~~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
+|+|||++|+|+|+.++|+.+... .+ ..+....+.............. . .+............ ...
T Consensus 78 ~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~-~~~-- 146 (201)
T cd04195 78 HCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDI------G--KRRLPTSHDDILKF-ARR-- 146 (201)
T ss_pred hcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCee------c--cccCCCCHHHHHHH-hcc--
Confidence 999999999999999999665100 00 0111111111111100000000 0 00000000000000 001
Q ss_pred ccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEe
Q psy736 169 PLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGH 228 (304)
Q Consensus 169 ~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 228 (304)
.. .+.++++++||++|+++|||++. . ++||++|++|+.++|+++.++|...+.|
T Consensus 147 --~~-~~~~~~~~~rr~~~~~~g~~~~~--~-~~eD~~~~~r~~~~g~~~~~~~~~~~~y 200 (201)
T cd04195 147 --RS-PFNHPTVMFRKSKVLAVGGYQDL--P-LVEDYALWARMLANGARFANLPEILVKA 200 (201)
T ss_pred --CC-CCCChHHhhhHHHHHHcCCcCCC--C-CchHHHHHHHHHHcCCceecccHHHhhc
Confidence 11 12355678999999999999987 2 4799999999999999999999887653
No 24
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=1.2e-27 Score=220.84 Aligned_cols=209 Identities=11% Similarity=0.085 Sum_probs=134.4
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcccc-ceeec-ccCC---CcH
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFE-YITAS-DMTW---GGF 82 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~-~i~~~-~~~~---~G~ 82 (304)
...|.||||||+||++ +.|.+||+|+++|+|++ +|||||||+|+|+|.++++++.+.... .++.+ ...+ .|+
T Consensus 38 ~~~p~VSViiP~~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K 114 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARRHGPNRK 114 (373)
T ss_pred CCCCCeEEEEECCCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCCCCCChH
Confidence 4578999999999999 99999999999999986 499999999999999999888765432 12222 2222 245
Q ss_pred HHHHhccccccCCcEEEEecCCcccccccccce--eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhh
Q psy736 83 NWKLREKNRHKKTVVCPIIDVISDQTFEYITAK--TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMM 160 (304)
Q Consensus 83 ~~a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
..+++.++++|+||+++|+|+|+.++|++|... .+..|.++.+....... .....+...... .......+.....
T Consensus 115 ~~~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~~~~v~~V~~~~~~~--~~~~~~~~l~~~-~~~~~~~~~~~~~ 191 (373)
T TIGR03472 115 VSNLINMLPHARHDILVIADSDISVGPDYLRQVVAPLADPDVGLVTCLYRGR--PVPGFWSRLGAM-GINHNFLPSVMVA 191 (373)
T ss_pred HHHHHHHHHhccCCEEEEECCCCCcChhHHHHHHHHhcCCCcceEeccccCC--CCCCHHHHHHHH-HhhhhhhHHHHHH
Confidence 667777899999999999999999999877110 01112221111100000 000000000000 0000001110000
Q ss_pred hcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 161 RRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 161 ~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
. ... ......|+++++||++|+++||||+..... .||++|+.|+.++|+++.+.|.+...+.
T Consensus 192 ~----~~~--~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~-~ED~~l~~~i~~~G~~v~~~~~~v~~~~ 253 (373)
T TIGR03472 192 R----ALG--RARFCFGATMALRRATLEAIGGLAALAHHL-ADDYWLGELVRALGLRVVLAPVVVDTDV 253 (373)
T ss_pred H----hcc--CCccccChhhheeHHHHHHcCChHHhcccc-hHHHHHHHHHHHcCCeEEecchhhhcCC
Confidence 0 000 112346899999999999999999744332 6999999999999999999987654443
No 25
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.95 E-value=3.7e-27 Score=202.22 Aligned_cols=190 Identities=16% Similarity=0.139 Sum_probs=124.8
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHH-HHhhccccceeeccc---CCCcHHHHHhccc
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIID-VISDQTFEYITASDM---TWGGFNWKLREKN 90 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~-~~~~~~~~~i~~~~~---~~~G~~~a~n~g~ 90 (304)
||||+||++ +.|.+||+|+++|++++..+|||||||||+|+|.++++ ....... .+..+.. .+.|+..++|.|+
T Consensus 1 viip~~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~-~v~~~~~~~~~~~g~~~a~n~g~ 78 (229)
T cd04192 1 VVIAARNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNF-QLKILNNSRVSISGKKNALTTAI 78 (229)
T ss_pred CEEEecCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCc-ceEEeeccCcccchhHHHHHHHH
Confidence 699999999 99999999999999886346999999999999998877 2222112 2222222 3679999999999
Q ss_pred cccCCcEEEEecCCcccccccccc---------eeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhh
Q psy736 91 RHKKTVVCPIIDVISDQTFEYITA---------KTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMR 161 (304)
Q Consensus 91 ~~A~gd~l~flD~D~~~~~~~l~~---------~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
.+++|||++|+|+|+.+.|++|.. ..++.+.........+ ......+............
T Consensus 79 ~~~~~d~i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ 146 (229)
T cd04192 79 KAAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAGPVIYFKGKSL------------LAKFQRLDWLSLLGLIAGS 146 (229)
T ss_pred HHhcCCEEEEECCCcccCHHHHHHHHHHhhcCCCcEEeeeeeecCCccH------------HHHHHHHHHHHHHHHHhhH
Confidence 999999999999999999977611 0111111100000000 0000000000000000000
Q ss_pred cCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCC-eEEEEecc
Q psy736 162 RGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGG-ILEIIPCS 224 (304)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~-~i~~~p~~ 224 (304)
.... ......|++++++|++|+++||||+.++. .+||.|+++|+.+.|+ ++.+.+..
T Consensus 147 --~~~~---~~~~~~g~~~~~rr~~~~~~ggf~~~~~~-~~eD~~~~~~~~~~g~~~~~~~~~~ 204 (229)
T cd04192 147 --FGLG---KPFMCNGANMAYRKEAFFEVGGFEGNDHI-ASGDDELLLAKVASKYPKVAYLKNP 204 (229)
T ss_pred --HHhc---CccccccceEEEEHHHHHHhcCCcccccc-ccCCHHHHHHHHHhCCCCEEEeeCc
Confidence 0000 11234588999999999999999998765 4799999999999999 88887543
No 26
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.94 E-value=5.9e-26 Score=194.05 Aligned_cols=184 Identities=20% Similarity=0.165 Sum_probs=121.8
Q ss_pred eEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccc
Q psy736 13 TSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRH 92 (304)
Q Consensus 13 vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~ 92 (304)
||||||+||++ +.|.+||+|+++|++++ +|||||||+|+|+|.++++. .. +.... .+.|++.++|.|+..
T Consensus 1 vsvii~~~n~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~-----~~-~~~~~-~~~g~~~a~n~g~~~ 70 (221)
T cd02522 1 LSIIIPTLNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS-----AG-VVVIS-SPKGRARQMNAGAAA 70 (221)
T ss_pred CEEEEEccCcH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc-----CC-eEEEe-CCcCHHHHHHHHHHh
Confidence 69999999999 99999999999998753 59999999999998876654 11 22222 357899999999999
Q ss_pred cCCcEEEEecCCcccccccccce--eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCcc
Q psy736 93 KKTVVCPIIDVISDQTFEYITAK--TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSPL 170 (304)
Q Consensus 93 A~gd~l~flD~D~~~~~~~l~~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
|+|++++|+|+|+.+.++++... ....+.. .+......... +... ........ .......
T Consensus 71 a~~~~i~~~D~D~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~------~~~~----~~~~~~~~-------~~~~~~~ 132 (221)
T cd02522 71 ARGDWLLFLHADTRLPPDWDAAIIETLRADGA-VAGAFRLRFDD------PGPR----LRLLELGA-------NLRSRLF 132 (221)
T ss_pred ccCCEEEEEcCCCCCChhHHHHHHHHhhcCCc-EEEEEEeeecC------Cccc----hhhhhhcc-------cceeccc
Confidence 99999999999999998666110 0000000 00000000000 0000 00000000 0000011
Q ss_pred ccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 171 RTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 171 ~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
..+ ..+.+++++|++|+++|||||.+ ++||+||++|+++.|+++.+ |...+.+.
T Consensus 133 ~~~-~~~~~~~~r~~~~~~~G~fd~~~---~~ED~d~~~r~~~~G~~~~~-~~~~~~~~ 186 (221)
T cd02522 133 GLP-YGDQGLFIRRELFEELGGFPELP---LMEDVELVRRLRRRGRPALL-PSPVTTSA 186 (221)
T ss_pred CCC-cCCceEEEEHHHHHHhCCCCccc---cccHHHHHHHHHhCCCEEEc-Cceeeecc
Confidence 111 23457899999999999999998 37999999999999999877 76666544
No 27
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.94 E-value=6.1e-27 Score=202.36 Aligned_cols=199 Identities=14% Similarity=0.094 Sum_probs=128.9
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccC
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKK 94 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~ 94 (304)
+|||+||++.+.|.+||+|+++| ..|||||||+|+|.+....+. .. ..........|.|++.|+|.|++.|+
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q-----~~~iivvDn~s~~~~~~~~~~-~~--~~i~~i~~~~n~G~~~a~N~g~~~a~ 72 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ-----VDKVVVVDNSSGNDIELRLRL-NS--EKIELIHLGENLGIAKALNIGIKAAL 72 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc-----CCEEEEEeCCCCccHHHHhhc-cC--CcEEEEECCCceehHHhhhHHHHHHH
Confidence 58999999668999999999988 239999999998876543322 11 12122223458899999999999998
Q ss_pred C---cEEEEecCCccccccccccee-----e-eeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCC
Q psy736 95 T---VVCPIIDVISDQTFEYITAKT-----V-VCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGD 165 (304)
Q Consensus 95 g---d~l~flD~D~~~~~~~l~~~~-----~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
| ||++|+|+|+.++|++|.... . ..+.+........... ......... ..... . ......
T Consensus 73 ~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~---~-----~~~~~~ 141 (237)
T cd02526 73 ENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRR--TGENSPGVR-KSGYK---L-----RIQKEG 141 (237)
T ss_pred hCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCC--CCeecccee-ccCcc---c-----eecccc
Confidence 8 999999999999997772210 0 0111111111000000 000000000 00000 0 000001
Q ss_pred CCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccCC
Q psy736 166 RSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRDK 233 (304)
Q Consensus 166 ~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~~ 233 (304)
...........++++++||++|+++||||+.+.. ++||+||++|+.++|+++.+.|.+.+.|....+
T Consensus 142 ~~~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~~-~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~ 208 (237)
T cd02526 142 EEGLKEVDFLITSGSLISLEALEKVGGFDEDLFI-DYVDTEWCLRARSKGYKIYVVPDAVLKHELGDK 208 (237)
T ss_pred cCCceEeeeeeccceEEcHHHHHHhCCCCHHHcC-ccchHHHHHHHHHcCCcEEEEcCeEEEecccCc
Confidence 1112234455567789999999999999999875 579999999999999999999999999876544
No 28
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.94 E-value=2.5e-26 Score=186.83 Aligned_cols=166 Identities=18% Similarity=0.184 Sum_probs=127.6
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccC
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKK 94 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~ 94 (304)
||||+||+. +.|.++|+|+.+|+++ ..|||||||||+|++.+.++.... .........+.|.+.++|.+++.++
T Consensus 1 vii~~~~~~-~~l~~~l~sl~~~~~~--~~~iiivdd~s~~~~~~~~~~~~~---~~~~~~~~~~~g~~~a~n~~~~~~~ 74 (166)
T cd04186 1 IIIVNYNSL-EYLKACLDSLLAQTYP--DFEVIVVDNASTDGSVELLRELFP---EVRLIRNGENLGFGAGNNQGIREAK 74 (166)
T ss_pred CEEEecCCH-HHHHHHHHHHHhccCC--CeEEEEEECCCCchHHHHHHHhCC---CeEEEecCCCcChHHHhhHHHhhCC
Confidence 699999998 9999999999999874 349999999999998877665432 1111223347899999999999999
Q ss_pred CcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCcccccc
Q psy736 95 TVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSPLRTPT 174 (304)
Q Consensus 95 gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (304)
+++++|+|+|+.+.++++ .......... ... ... .+.
T Consensus 75 ~~~i~~~D~D~~~~~~~l------~~~~~~~~~~-----~~~-~~~-------------------------------~~~ 111 (166)
T cd04186 75 GDYVLLLNPDTVVEPGAL------LELLDAAEQD-----PDV-GIV-------------------------------GPK 111 (166)
T ss_pred CCEEEEECCCcEECccHH------HHHHHHHHhC-----CCc-eEE-------------------------------Ecc
Confidence 999999999998887655 1111000000 000 000 000
Q ss_pred ccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeec
Q psy736 175 MAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVF 230 (304)
Q Consensus 175 ~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~ 230 (304)
..|++++++|++|+++||||+.+.. ++||+||++|+.+.|+++.+.|++.+.|.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~~~~h~~ 166 (166)
T cd04186 112 VSGAFLLVRREVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQAVIYHHG 166 (166)
T ss_pred CceeeEeeeHHHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccceEEEecC
Confidence 4578999999999999999999876 579999999999999999999999999963
No 29
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.94 E-value=1.3e-25 Score=195.86 Aligned_cols=190 Identities=10% Similarity=0.035 Sum_probs=124.4
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhc---CCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINR---SPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~q---t~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
|++|||||+||++ +.|.+||+|+.+| ++. .+|||||||||+|+|.++++.+.... + ++.+..++.|++.|+|
T Consensus 1 ~~vSVIi~~yN~~-~~l~~~l~sl~~~~~~~~~--~~EiIVvDdgStD~t~~i~~~~~~~~-~-i~~i~~~~~G~~~A~N 75 (248)
T PRK10063 1 MLLSVITVAFRNL-EGIVKTHASLRHLAQDPGI--SFEWIVVDGGSNDGTREFLENLNGIF-N-LRFVSEPDNGIYDAMN 75 (248)
T ss_pred CeEEEEEEeCCCH-HHHHHHHHHHHHHHhCCCC--CEEEEEEECcCcccHHHHHHHhcccC-C-EEEEECCCCCHHHHHH
Confidence 6899999999999 9999999999754 233 45999999999999999888765432 1 3333445779999999
Q ss_pred ccccccCCcEEEEecCCccccccccc--ceeeee-ceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCC
Q psy736 88 EKNRHKKTVVCPIIDVISDQTFEYIT--AKTVVC-PIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGG 164 (304)
Q Consensus 88 ~g~~~A~gd~l~flD~D~~~~~~~l~--~~~~~~-~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
.|++.|+|||++|||+|+.+.|+.+. ...... +.....+.. +...+ .+.. ......+.. ...
T Consensus 76 ~Gi~~a~g~~v~~ld~DD~~~~~~~~~~~~~~~~~~~~~v~g~~-~~~~~------~~~~----~~~~~~~~~-~~~--- 140 (248)
T PRK10063 76 KGIAMAQGRFALFLNSGDIFHQDAANFVRQLKMQKDNAMIIGDA-LLDFG------DGHK----IKRSAKPGW-YIY--- 140 (248)
T ss_pred HHHHHcCCCEEEEEeCCcccCcCHHHHHHHHHhCCCCeEEEeee-EEEcC------CCcE----EEEccCChh-HHh---
Confidence 99999999999999999988875330 000000 000000000 00000 0000 000000000 000
Q ss_pred CCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 165 DRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 165 ~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
...+ ..+..++++|+.|+ .||||+.+.. .||+||.+|+...|+++.++|.....+.
T Consensus 141 -----~~~~-~~~~~~~~~~~~~~-~~~fd~~~~~--~~Dydl~lrl~~~g~~~~~v~~~l~~y~ 196 (248)
T PRK10063 141 -----HSLP-ASHQAIFFPVSGLK-KWRYDLQYKV--SSDYALAARLYKAGYAFKKLNGLVSEFS 196 (248)
T ss_pred -----cCCC-CCCcEEEEEHHHHh-cCCCCcccch--HHhHHHHHHHHHcCCcEEEcCceeEEEe
Confidence 0011 22345678999887 4789998853 6999999999999999999998766543
No 30
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.94 E-value=6.5e-26 Score=223.73 Aligned_cols=209 Identities=13% Similarity=0.103 Sum_probs=135.3
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
+..|+||||||+|||+.+.+.+|+.++++++|+...+|||||||||+|+|.++++++. ..++... ..++|++.++|
T Consensus 257 ~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~la~~~~---v~yI~R~-~n~~gKAGnLN 332 (852)
T PRK11498 257 SLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQEVG---VKYIARP-THEHAKAGNIN 332 (852)
T ss_pred CCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHHHHHHCC---cEEEEeC-CCCcchHHHHH
Confidence 3469999999999998335678999999999986567999999999999987766542 3344332 22457899999
Q ss_pred ccccccCCcEEEEecCCcccccccccce---eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCC
Q psy736 88 EKNRHKKTVVCPIIDVISDQTFEYITAK---TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGG 164 (304)
Q Consensus 88 ~g~~~A~gd~l~flD~D~~~~~~~l~~~---~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
.|+++++|||++++|+|+++.++.|... ....|.+..+......+. .+....... .++..............
T Consensus 333 ~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n--~dp~~rnl~---~~~~~~~e~~~fy~~iq 407 (852)
T PRK11498 333 NALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFS--PDPFERNLG---RFRKTPNEGTLFYGLVQ 407 (852)
T ss_pred HHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccC--CchHHHhhH---HHhhcccchhHHHHHHH
Confidence 9999999999999999999998776111 011222222211100000 000000000 00000000000000000
Q ss_pred CCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEe
Q psy736 165 DRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGH 228 (304)
Q Consensus 165 ~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 228 (304)
..........+.|+|+++||++|+++||||++.. .||.|+++|+.++||++.|.|+..+.-
T Consensus 408 ~g~~~~~a~~~~Gs~aviRReaLeeVGGfd~~ti---tED~dlslRL~~~Gyrv~yl~~~~a~g 468 (852)
T PRK11498 408 DGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETV---TEDAHTSLRLHRRGYTSAYMRIPQAAG 468 (852)
T ss_pred hHHHhhcccccccceeeeEHHHHHHhcCCCCCcc---CccHHHHHHHHHcCCEEEEEeccceeE
Confidence 0001112334678999999999999999999852 699999999999999999998776653
No 31
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.94 E-value=1.1e-26 Score=202.28 Aligned_cols=212 Identities=15% Similarity=0.100 Sum_probs=136.0
Q ss_pred CCCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc-cceee-cccCCCcHHH
Q psy736 7 PTFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF-EYITA-SDMTWGGFNW 84 (304)
Q Consensus 7 ~~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~-~~i~~-~~~~~~G~~~ 84 (304)
....|++|||||+||++ +.|..+++++.++......+|||||||||+|+|.++++.+.+... ..+.. ....|.|++.
T Consensus 5 ~~~~~~vsVvIp~yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~~ 83 (243)
T PLN02726 5 GEGAMKYSIIVPTYNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGKLGLGT 83 (243)
T ss_pred CCCCceEEEEEccCCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCCCCHHH
Confidence 45678999999999999 999999998876533222469999999999999999988765432 22332 2345789999
Q ss_pred HHhccccccCCcEEEEecCCcccccccccce--eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCC-hhhhhh
Q psy736 85 KLREKNRHKKTVVCPIIDVISDQTFEYITAK--TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVP-PREMMR 161 (304)
Q Consensus 85 a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 161 (304)
|+|.|++.|+|||++|+|+|+.++|+++... .+..+..+.+....+...+.. . .+.. .+..... ......
T Consensus 84 a~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~~----~--~~~~-~r~~~~~~~~~~~~ 156 (243)
T PLN02726 84 AYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVTGTRYVKGGGV----H--GWDL-RRKLTSRGANVLAQ 156 (243)
T ss_pred HHHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHHHHhcCCcEEEEccccCCCCc----C--CccH-HHHHHHHHHHHHHH
Confidence 9999999999999999999999998666100 000000111100000000000 0 0000 0000000 000000
Q ss_pred cCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccC
Q psy736 162 RGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRD 232 (304)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~ 232 (304)
...........|+++++||++++++|.+.+... | .+|+||++|+..+|+++..+|...+.|....
T Consensus 157 ----~~~~~~~~d~~g~~~~~rr~~~~~i~~~~~~~~-~-~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~ 221 (243)
T PLN02726 157 ----TLLWPGVSDLTGSFRLYKRSALEDLVSSVVSKG-Y-VFQMEIIVRASRKGYRIEEVPITFVDRVYGE 221 (243)
T ss_pred ----HHhCCCCCcCCCcccceeHHHHHHHHhhccCCC-c-EEehHHHHHHHHcCCcEEEeCcEEeCCCCCc
Confidence 000112334568889999999999997765432 2 4789999999999999999998877766543
No 32
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.94 E-value=6.1e-26 Score=200.58 Aligned_cols=202 Identities=13% Similarity=0.037 Sum_probs=124.2
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeec-ccCCCcHHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITAS-DMTWGGFNWKL 86 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~-~~~~~G~~~a~ 86 (304)
..|.||||||+||++ +.|.+||+|+++|++++. |||||||||+| .++++.+.+. ....++.+ ...|.|.+.++
T Consensus 3 ~~p~VSVIip~yN~~-~~l~~~l~Svl~Qt~~~~--EiIVVDDgS~~--~~~~~~~~~~~~~~ri~~i~~~~n~G~~~a~ 77 (279)
T PRK10018 3 DNPLISIYMPTWNRQ-QLAIRAIKSVLRQDYSNW--EMIIVDDCSTS--WEQLQQYVTALNDPRITYIHNDINSGACAVR 77 (279)
T ss_pred CCCEEEEEEEeCCCH-HHHHHHHHHHHhCCCCCe--EEEEEECCCCC--HHHHHHHHHHcCCCCEEEEECCCCCCHHHHH
Confidence 468999999999999 999999999999999764 99999999985 3344444332 12223332 34588999999
Q ss_pred hccccccCCcEEEEecCCccccccccccee-eee--cee-eeeCCCceeeeccCCceecccccCCCcccccCChhhhhhc
Q psy736 87 REKNRHKKTVVCPIIDVISDQTFEYITAKT-VVC--PII-DVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRR 162 (304)
Q Consensus 87 n~g~~~A~gd~l~flD~D~~~~~~~l~~~~-~~~--~~i-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
|.|++.|+|||++|||+|+.+.|+.|.... ... +.. ...... ....+.. ......... .+......
T Consensus 78 N~gi~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~--~p~~~~~~- 147 (279)
T PRK10018 78 NQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYAND-YVCQGEV------YSQPASLPL--YPKSPYSR- 147 (279)
T ss_pred HHHHHHcCCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccc-eeecCcc------cccccccCC--CCCCCCCH-
Confidence 999999999999999999999997661000 000 000 001110 0000000 000000000 00000000
Q ss_pred CCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEecc-EEEeeccCC
Q psy736 163 GGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCS-HVGHVFRDK 233 (304)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~-~v~H~~r~~ 233 (304)
...+. ....|+..++++..+. .|+|||++.. +||+||++|+.+.|++...+|++ .++|....+
T Consensus 148 ----~~~~~-~n~ig~~~~~~~~~~~-~~~fd~~~~~--~eDydlwlrl~~~~~~~~~~~~~l~~y~~~~~s 211 (279)
T PRK10018 148 ----RLFYK-RNIIGNQVFTWAWRFK-ECLFDTELKA--AQDYDIFLRMVVEYGEPWKVEEATQILHINHGE 211 (279)
T ss_pred ----HHHHH-hcCcCceeeehhhhhh-hcccCCCCCc--cccHHHHHHHHHhcCceEeeccceEEEEcCCCC
Confidence 00000 1122444455566554 5789999863 79999999999999999999988 455553333
No 33
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.94 E-value=3e-26 Score=199.91 Aligned_cols=198 Identities=15% Similarity=0.116 Sum_probs=137.0
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
+..|++|||||+||++ +.|.+||+|+++|++++..+|||||||||+|+|.++++.+... ........++.|.+.++|
T Consensus 26 ~~~~~isVvip~~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~g~~~a~n 102 (251)
T cd06439 26 AYLPTVTIIIPAYNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPERRGKAAALN 102 (251)
T ss_pred CCCCEEEEEEecCCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCCCCChHHHHH
Confidence 5678899999999999 9999999999999887644799999999999999988877654 111122345789999999
Q ss_pred ccccccCCcEEEEecCCccccccccc---------ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhh
Q psy736 88 EKNRHKKTVVCPIIDVISDQTFEYIT---------AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPRE 158 (304)
Q Consensus 88 ~g~~~A~gd~l~flD~D~~~~~~~l~---------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
.|++.|+|||++|+|+|+.++|+++. ...++.+.....+.+. .......- .. ... .
T Consensus 103 ~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~----~~---~~~-~ 167 (251)
T cd06439 103 RALALATGEIVVFTDANALLDPDALRLLVRHFADPSVGAVSGELVIVDGGG-------SGSGEGLY----WK---YEN-W 167 (251)
T ss_pred HHHHHcCCCEEEEEccccCcCHHHHHHHHHHhcCCCccEEEeEEEecCCcc-------cchhHHHH----HH---HHH-H
Confidence 99999999999999999999996661 1112222111111110 00000000 00 000 0
Q ss_pred hhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccC
Q psy736 159 MMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRD 232 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~ 232 (304)
... ............|+++++||++|+ +|++.. ..||.+++.|+.+.|+++.+.|.+.++|....
T Consensus 168 ~~~---~~~~~~~~~~~~g~~~~~rr~~~~---~~~~~~---~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~ 232 (251)
T cd06439 168 LKR---AESRLGSTVGANGAIYAIRRELFR---PLPADT---INDDFVLPLRIARQGYRVVYEPDAVAYEEVAE 232 (251)
T ss_pred HHH---HHHhcCCeeeecchHHHhHHHHhc---CCCccc---chhHHHHHHHHHHcCCeEEeccccEEEEeCcc
Confidence 000 000011234456888889999998 777654 36999999999999999999999998877543
No 34
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.94 E-value=8.3e-26 Score=204.75 Aligned_cols=205 Identities=13% Similarity=0.063 Sum_probs=131.2
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhc
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLRE 88 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~ 88 (304)
..|.||||||+||++ +.|.+||+|+++|++++. |||||||||+|+|.++++.+.+... .++.+.++|.|.+.|+|.
T Consensus 4 ~~p~vSVIIP~yN~~-~~L~~~l~Sl~~Qt~~~~--EIIiVdDgStD~t~~i~~~~~~~~~-~i~vi~~~n~G~~~arN~ 79 (328)
T PRK10073 4 STPKLSIIIPLYNAG-KDFRAFMESLIAQTWTAL--EIIIVNDGSTDNSVEIAKHYAENYP-HVRLLHQANAGVSVARNT 79 (328)
T ss_pred CCCeEEEEEeccCCH-HHHHHHHHHHHhCCCCCe--EEEEEeCCCCccHHHHHHHHHhhCC-CEEEEECCCCChHHHHHH
Confidence 468999999999999 999999999999998754 9999999999999999988866543 344455668999999999
Q ss_pred cccccCCcEEEEecCCcccccccccce--eeeec--eeeeeCCCceeeeccCCceeccccc-CCCcccccCChhh-hhhc
Q psy736 89 KNRHKKTVVCPIIDVISDQTFEYITAK--TVVCP--IIDVISDQTFEYITASDMTWGGFNW-KLNFRWYRVPPRE-MMRR 162 (304)
Q Consensus 89 g~~~A~gd~l~flD~D~~~~~~~l~~~--~~~~~--~i~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~ 162 (304)
|++.|+|||++|+|+|+.+.|+.+... .+..+ .+...+.. +........ ...+.. ..... ..+.... ....
T Consensus 80 gl~~a~g~yi~flD~DD~~~p~~l~~l~~~~~~~~~dvv~~~~~-~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~~ 156 (328)
T PRK10073 80 GLAVATGKYVAFPDADDVVYPTMYETLMTMALEDDLDVAQCNAD-WCFRDTGET-WQSIPSDRLRST-GVLSGPDWLRMA 156 (328)
T ss_pred HHHhCCCCEEEEECCCCccChhHHHHHHHHHHhCCCCEEEEccE-EEEeCCCcc-cccccccccccc-ceechHHHHHHH
Confidence 999999999999999999999655000 00000 00000000 000000000 000000 00000 0000000 0000
Q ss_pred CCCCCCccccccccceeeeEehHHHhHhC-CCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEe
Q psy736 163 GGDRSSPLRTPTMAGGLFAIDKDYFYELG-SYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGH 228 (304)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~irr~~f~~iG-GFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 228 (304)
.... .... ..++-++||+++++.| .|++++. .||.++..++...+.++.++|+....+
T Consensus 157 --l~~~--~~~~-~~~~~l~Rr~~l~~~~~~f~~~~~---~eD~~~~~~~~~~~~~v~~~~~~ly~Y 215 (328)
T PRK10073 157 --LSSR--RWTH-VVWLGVYRRDFIVKNNIKFEPGLH---HQDIPWTTEVMFNALRVRYTEQSLYKY 215 (328)
T ss_pred --HhhC--CCCc-cHhHHHHHHHHHHHcCCccCCCCE---eccHHHHHHHHHHCCEEEEECCCEEEE
Confidence 0000 0000 1123468999999998 4777763 599999999999999999999865443
No 35
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.93 E-value=2.2e-26 Score=197.10 Aligned_cols=197 Identities=17% Similarity=0.104 Sum_probs=131.1
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccC
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKK 94 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~ 94 (304)
||||+||++ +.|.+||+|+.+|++. ..+|||||||||+|+|.++++.+.+............|.|++.++|.|++.|+
T Consensus 1 ViIp~yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n~G~~~a~n~g~~~a~ 78 (224)
T cd06442 1 IIIPTYNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGFKAAR 78 (224)
T ss_pred CeEeccchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCCCChHHHHHHHHHHcC
Confidence 699999999 9999999999999872 24599999999999999988887664433222234568899999999999999
Q ss_pred CcEEEEecCCccccccccc---------ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCC
Q psy736 95 TVVCPIIDVISDQTFEYIT---------AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGD 165 (304)
Q Consensus 95 gd~l~flD~D~~~~~~~l~---------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
|||++|+|+|+.+.|+++. ...++.+.. .... +. ...+....+............ .
T Consensus 79 gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~g~~-~~~~------~~------~~~~~~~~~~~~~~~~~~~~~--~ 143 (224)
T cd06442 79 GDVIVVMDADLSHPPEYIPELLEAQLEGGADLVIGSR-YVEG------GG------VEGWGLKRKLISRGANLLARL--L 143 (224)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhcCCCCEEEEee-eecC------Cc------cCCCcHHHHHHHHHHHHHHHH--H
Confidence 9999999999999986661 111111100 0000 00 001110000000000000000 0
Q ss_pred CCCccccccccceeeeEehHHHhHhC-CCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccCC
Q psy736 166 RSSPLRTPTMAGGLFAIDKDYFYELG-SYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRDK 233 (304)
Q Consensus 166 ~~~~~~~~~~~G~~~~irr~~f~~iG-GFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~~ 233 (304)
.........|++++++|++|+++| ++++..+ .+|+||++|++++|+++.+.|.+.+.|....+
T Consensus 144 --~~~~~~~~~~~~~~~~r~~~~~ig~~~~~~~~---~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~s 207 (224)
T cd06442 144 --LGRKVSDPTSGFRAYRREVLEKLIDSLVSKGY---KFQLELLVRARRLGYRIVEVPITFVDREHGES 207 (224)
T ss_pred --cCCCCCCCCCccchhhHHHHHHHhhhccCCCc---EEeHHHHHHHHHcCCeEEEeCeEEeccCCCcC
Confidence 011233456788999999999998 5554321 46899999999999999999988877765443
No 36
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.93 E-value=2e-25 Score=189.39 Aligned_cols=198 Identities=11% Similarity=0.003 Sum_probs=130.9
Q ss_pred EEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccc-eeecccCCCcHHHHHhccccc
Q psy736 14 SIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEY-ITASDMTWGGFNWKLREKNRH 92 (304)
Q Consensus 14 SIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~-i~~~~~~~~G~~~a~n~g~~~ 92 (304)
|||||+||++ +.|.+||+|+++|++++ +|||||||||+|+|.++++.+..+.... .......|.|.++++|.|+..
T Consensus 1 sIvIp~yn~~-~~l~~~l~sl~~q~~~~--~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~~ 77 (214)
T cd04196 1 AVLMATYNGE-KYLREQLDSILAQTYKN--DELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQA 77 (214)
T ss_pred CEEEEecCcH-HHHHHHHHHHHhCcCCC--eEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHHh
Confidence 7999999999 99999999999999874 5999999999999999998887654222 223344578999999999999
Q ss_pred cCCcEEEEecCCccccccccc---ceeeeeceeeeeCCCceeeeccCCceecccccCCCc-ccccCChhhhhhcCCCCCC
Q psy736 93 KKTVVCPIIDVISDQTFEYIT---AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNF-RWYRVPPREMMRRGGDRSS 168 (304)
Q Consensus 93 A~gd~l~flD~D~~~~~~~l~---~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (304)
++|||++|+|+|+.+.|+.+. ......+....+.......... +....... ........ .....
T Consensus 78 ~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~------~~~~~ 145 (214)
T cd04196 78 ADGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDEN------GNPIGESFFEYQKIKPG------TSFNN 145 (214)
T ss_pred CCCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCC------CCCcccccccccccCCc------cCHHH
Confidence 999999999999999996661 0000111111111111000000 00000000 00000000 00000
Q ss_pred ccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 169 PLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 169 ~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
......+.|+++++||++++++|+|++.+. ..||.++..++.+ |+++.+.|...+.|.
T Consensus 146 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~--~~~D~~~~~~~~~-~~~~~~~~~~~~~~r 203 (214)
T cd04196 146 LLFQNVVTGCTMAFNRELLELALPFPDADV--IMHDWWLALLASA-FGKVVFLDEPLILYR 203 (214)
T ss_pred HHHhCccCCceeeEEHHHHHhhcccccccc--ccchHHHHHHHHH-cCceEEcchhHHHHh
Confidence 112234568889999999999999999852 3699999998877 678999998776543
No 37
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.93 E-value=2.9e-25 Score=219.62 Aligned_cols=210 Identities=15% Similarity=0.139 Sum_probs=132.5
Q ss_pred CCCCCeEEEEEeeCCChHHH-HHHHHHHHhcCCCCCcceEEEEeCCCCCCch--------------HHHHHHhhcc-ccc
Q psy736 8 TFLPTTSIVIVFHNEAWSTL-LRTVWSVINRSPRTLLKEIILVDDASERVVC--------------PIIDVISDQT-FEY 71 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L-~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~--------------~ii~~~~~~~-~~~ 71 (304)
+..|.||||||+|||+ ..+ .+|+.++++++|+...+|||||||||+|+|. +.++++.++. ..+
T Consensus 128 ~~~P~VsViIP~yNE~-~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~y 206 (713)
T TIGR03030 128 EEWPTVDVFIPTYNED-LEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNY 206 (713)
T ss_pred ccCCeeEEEEcCCCCC-HHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEE
Confidence 5579999999999998 555 6799999999998555799999999999973 2333333322 223
Q ss_pred eeecccCCCcHHHHHhccccccCCcEEEEecCCcccccccccce--ee-eeceeeeeCCCceeeeccCCceecccccCCC
Q psy736 72 ITASDMTWGGFNWKLREKNRHKKTVVCPIIDVISDQTFEYITAK--TV-VCPIIDVISDQTFEYITASDMTWGGFNWKLN 148 (304)
Q Consensus 72 i~~~~~~~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 148 (304)
+... ...+|++.++|.|+++++|||++++|+|+.+.|+.|... .+ ..|.+..+........ .+ .+.....
T Consensus 207 i~r~-~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~--p~----~~~~nl~ 279 (713)
T TIGR03030 207 ITRP-RNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVS--PD----PIERNLG 279 (713)
T ss_pred EECC-CCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccC--CC----HHhhhhH
Confidence 3322 223567889999999999999999999999999777110 00 1222222211100000 00 0000000
Q ss_pred cccccCCh-hh-hhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEE
Q psy736 149 FRWYRVPP-RE-MMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHV 226 (304)
Q Consensus 149 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v 226 (304)
. ....+. .. ................+.|+++++||++|+++||||++.. .||.|+++|+.++||++.|.|++.+
T Consensus 280 ~-~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y~~~~~~ 355 (713)
T TIGR03030 280 T-FRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAYLDRPLI 355 (713)
T ss_pred H-HHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEEeccccc
Confidence 0 000000 00 0000000000112334568899999999999999998753 6999999999999999999999887
Q ss_pred Eee
Q psy736 227 GHV 229 (304)
Q Consensus 227 ~H~ 229 (304)
.+.
T Consensus 356 ~g~ 358 (713)
T TIGR03030 356 AGL 358 (713)
T ss_pred ccc
Confidence 654
No 38
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.93 E-value=2.5e-25 Score=197.81 Aligned_cols=189 Identities=17% Similarity=0.084 Sum_probs=121.4
Q ss_pred EeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeec-ccCCCcHHHHHhcccccc---
Q psy736 18 VFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITAS-DMTWGGFNWKLREKNRHK--- 93 (304)
Q Consensus 18 p~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~-~~~~~G~~~a~n~g~~~A--- 93 (304)
+|||.+.+.|.+||+|+++|+ .|||||||||+|+ +.++.+.+... .+..+ ...|.|++.|+|.|++.|
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~-----~~iiVVDN~S~~~--~~~~~~~~~~~-~i~~i~~~~N~G~a~a~N~Gi~~a~~~ 72 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV-----DRIIAVDNSPHSD--QPLKNARLRGQ-KIALIHLGDNQGIAGAQNQGLDASFRR 72 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC-----CEEEEEECcCCCc--HhHHHHhccCC-CeEEEECCCCcchHHHHHHHHHHHHHC
Confidence 489974389999999999985 2999999999865 12223322222 23332 345889999999999888
Q ss_pred CCcEEEEecCCcccccccc-------c----ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhc
Q psy736 94 KTVVCPIIDVISDQTFEYI-------T----AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRR 162 (304)
Q Consensus 94 ~gd~l~flD~D~~~~~~~l-------~----~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
.+||++|||+|+.++++.+ . ...++.|.+ ++...-.. ..... .. .........
T Consensus 73 ~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~-~~--~~~~~~~~~-------- 136 (281)
T TIGR01556 73 GVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRF--FDRGTSRR---LPAIH-LD--GLLLRQISL-------- 136 (281)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeE--EcCCCccc---CCcee-ec--ccceeeecc--------
Confidence 7899999999999998665 1 111222211 11100000 00000 00 000000000
Q ss_pred CCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccC
Q psy736 163 GGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRD 232 (304)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~ 232 (304)
.....+.......++.++++|++|+++|+|||+|+++ +||+|+|+|+.++|+++.++|++.+.|....
T Consensus 137 -~~~~~~~~~~~~~~sg~li~~~~~~~iG~fde~~fi~-~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~ 204 (281)
T TIGR01556 137 -DGLTTPQKTSFLISSGCLITREVYQRLGMMDEELFID-HVDTEWSLRAQNYGIPLYIDPDIVLEHRIGD 204 (281)
T ss_pred -cccCCceeccEEEcCcceeeHHHHHHhCCccHhhccc-chHHHHHHHHHHCCCEEEEeCCEEEEEecCC
Confidence 0111122233333344579999999999999999986 6999999999999999999999999997654
No 39
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.93 E-value=1.3e-25 Score=193.89 Aligned_cols=203 Identities=15% Similarity=0.096 Sum_probs=131.2
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccc
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNR 91 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~ 91 (304)
+||||||+||++.+.|.+||+|+.+|+ .+|||||||||+|+|.+++...... ..+.....++.|+..++|.|++
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d~~~~~l~~~~~~--~~~~v~~~~~~g~~~a~n~g~~ 74 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDEPYLSILSQTVKY--GGIFVITVPHPGKRRALAEGIR 74 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCChHHHHHHHhhccC--CcEEEEecCCCChHHHHHHHHH
Confidence 489999999996589999999999998 2499999999999988766433322 2233344568899999999999
Q ss_pred ccCCcEEEEecCCcccccccccc--eeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCc
Q psy736 92 HKKTVVCPIIDVISDQTFEYITA--KTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSP 169 (304)
Q Consensus 92 ~A~gd~l~flD~D~~~~~~~l~~--~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
.|+|||++|+|+|+.+.|++|.. ..+..+.+..+.......... ...+.... . .+.......... .....
T Consensus 75 ~a~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~v~~v~~~~~~~~~~-~~~~~~~~-~-~~~~~~~~~~~~-----~~~~~ 146 (235)
T cd06434 75 HVTTDIVVLLDSDTVWPPNALPEMLKPFEDPKVGGVGTNQRILRPR-DSKWSFLA-A-EYLERRNEEIRA-----AMSYD 146 (235)
T ss_pred HhCCCEEEEECCCceeChhHHHHHHHhccCCCEeEEcCceEeecCc-ccHHHHHH-H-HHHHHHHHHHHH-----HHhhC
Confidence 99999999999999999977610 011122222222211110000 00000000 0 000000000000 00011
Q ss_pred cccccccceeeeEehHHHhHhCCCCCCC--------cccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 170 LRTPTMAGGLFAIDKDYFYELGSYDEGM--------DIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 170 ~~~~~~~G~~~~irr~~f~~iGGFDe~~--------~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
.....+.|+++++||++++++|+ ++.| ....+||.+|+.|+.+.|+++.+.|.+.+.|.
T Consensus 147 ~~~~~~~G~~~~~rr~~l~~~~~-~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~ 213 (235)
T cd06434 147 GGVPCLSGRTAAYRTEILKDFLF-LEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTE 213 (235)
T ss_pred CCEEEccCcHHHHHHHHHhhhhh-HHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEE
Confidence 12345678899999999999853 4333 12247999999999999999999999999987
No 40
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=7.5e-23 Score=192.65 Aligned_cols=205 Identities=19% Similarity=0.143 Sum_probs=138.8
Q ss_pred CCCeEEEEEeeCCChH-HHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeec--ccCCCcHHHHH
Q psy736 10 LPTTSIVIVFHNEAWS-TLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITAS--DMTWGGFNWKL 86 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~-~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~--~~~~~G~~~a~ 86 (304)
+|++|||||+|||+ . .+++|+.|+.+|+|+.. |||||||+|+|+|.+++++...+..+.++.. ...+.|++.++
T Consensus 53 ~p~vsviiP~ynE~-~~~~~~~l~s~~~~dyp~~--evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al 129 (439)
T COG1215 53 LPKVSVIIPAYNEE-PEVLEETLESLLSQDYPRY--EVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEKKNGGKAGAL 129 (439)
T ss_pred CCceEEEEecCCCc-hhhHHHHHHHHHhCCCCCc--eEEEECCCCChhHHHHHHHHHhhcCcceEEEeccccCccchHHH
Confidence 49999999999999 6 99999999999999864 9999999999999999988877653223332 24588999999
Q ss_pred hccccccCCcEEEEecCCcccccccccce--eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCC-hhhhhhcC
Q psy736 87 REKNRHKKTVVCPIIDVISDQTFEYITAK--TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVP-PREMMRRG 163 (304)
Q Consensus 87 n~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 163 (304)
|.|+..++||+++++|+|..++|+.|.+. .+..+....+......... .+. .++....+..... .......
T Consensus 130 ~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~~~~~~v~~~~~~~~~-~~~----~~~l~~~~~~~~~~~~~~~~~- 203 (439)
T COG1215 130 NNGLKRAKGDVVVILDADTVPEPDALRELVSPFEDPPVGAVVGTPRIRNR-PDP----SNLLGRIQAIEYLSAFYFRLR- 203 (439)
T ss_pred HHHHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcCCCeeEEeCCceeeec-CCh----hhhcchhcchhhhhhHHHhhh-
Confidence 99999999999999999999999777100 0000000000000000000 000 0000000000000 0000000
Q ss_pred CCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEE
Q psy736 164 GDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVG 227 (304)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~ 227 (304)
............|++.++||++++++|||++... .||.++++|+..+|+++.+.|++.+.
T Consensus 204 -~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~~~~~~~ 263 (439)
T COG1215 204 -AASKGGLISFLSGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYVPEAIVW 263 (439)
T ss_pred -hhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEeecceEe
Confidence 0011113556789999999999999999999863 69999999999999999999998544
No 41
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.88 E-value=7.3e-23 Score=174.15 Aligned_cols=188 Identities=16% Similarity=0.058 Sum_probs=119.4
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCC--CCCcceEEEEeCCCCCCchHHHHHHhhccccceeec-ccCCCcHHHHHhcccc
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSP--RTLLKEIILVDDASERVVCPIIDVISDQTFEYITAS-DMTWGGFNWKLREKNR 91 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~--~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~-~~~~~G~~~a~n~g~~ 91 (304)
||||+||++ +.|.+||+++++|+. +...+|||||||||+|+|.++++.+.......++.. ...|.|++.|+|.|++
T Consensus 1 iiip~yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~~ 79 (211)
T cd04188 1 VVIPAYNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGML 79 (211)
T ss_pred CEEcccChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHHH
Confidence 699999999 999999999998864 112469999999999999999988766543322222 2347899999999999
Q ss_pred ccCCcEEEEecCCccccccccc---------ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCC-hhhhhh
Q psy736 92 HKKTVVCPIIDVISDQTFEYIT---------AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVP-PREMMR 161 (304)
Q Consensus 92 ~A~gd~l~flD~D~~~~~~~l~---------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 161 (304)
.|+|||++|+|+|..++|+.+. ...++.+........ .......++..... ......
T Consensus 80 ~a~gd~i~~ld~D~~~~~~~l~~l~~~~~~~~~~~v~g~r~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 146 (211)
T cd04188 80 AARGDYILFADADLATPFEELEKLEEALKTSGYDIAIGSRAHLASA-------------AVVKRSWLRNLLGRGFNFLVR 146 (211)
T ss_pred HhcCCEEEEEeCCCCCCHHHHHHHHHHHhccCCcEEEEEeeccCCc-------------ccccccHHHHHHHHHHHHHHH
Confidence 9999999999999999986551 001111100000000 00000000000000 000000
Q ss_pred cCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEe
Q psy736 162 RGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIP 222 (304)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p 222 (304)
. ....+ -.+. ..+..+++|++++++++..+. ..| .+|+||+.|+.++|+++..+|
T Consensus 147 ~--~~~~~-~~d~-~~g~~~~~r~~~~~~~~~~~~-~~~-~~d~el~~r~~~~g~~~~~vp 201 (211)
T cd04188 147 L--LLGLG-IKDT-QCGFKLFTRDAARRLFPRLHL-ERW-AFDVELLVLARRLGYPIEEVP 201 (211)
T ss_pred H--HcCCC-Cccc-ccCceeEcHHHHHHHHhhhhc-cce-EeeHHHHHHHHHcCCeEEEcC
Confidence 0 00001 1111 234567999999999865332 234 479999999999999999999
No 42
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.87 E-value=1.2e-21 Score=158.88 Aligned_cols=96 Identities=24% Similarity=0.182 Sum_probs=75.9
Q ss_pred EEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc
Q psy736 14 SIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK 93 (304)
Q Consensus 14 SIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A 93 (304)
|||||+||++ +.|.+||+|+++|+.. ..|||||||||+|+|.++++++.+............|.|++.++|.|++.|
T Consensus 1 Svvip~~n~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~g~~~~~n~~~~~a 77 (169)
T PF00535_consen 1 SVVIPTYNEA-EYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENLGFSAARNRGIKHA 77 (169)
T ss_dssp EEEEEESS-T-TTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCSHHHHHHHHHHHH-
T ss_pred CEEEEeeCCH-HHHHHHHHHHhhccCC--CEEEEEecccccccccccccccccccccccccccccccccccccccccccc
Confidence 8999999998 9999999999999665 459999999999999999988876222222222233679999999999999
Q ss_pred CCcEEEEecCCcccccccc
Q psy736 94 KTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 94 ~gd~l~flD~D~~~~~~~l 112 (304)
+|+|++|+|+|+.+.++++
T Consensus 78 ~~~~i~~ld~D~~~~~~~l 96 (169)
T PF00535_consen 78 KGEYILFLDDDDIISPDWL 96 (169)
T ss_dssp -SSEEEEEETTEEE-TTHH
T ss_pred ceeEEEEeCCCceEcHHHH
Confidence 9999999999999999665
No 43
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.86 E-value=4.3e-22 Score=173.47 Aligned_cols=186 Identities=10% Similarity=-0.023 Sum_probs=115.1
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCC--------CCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcH----
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPR--------TLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGF---- 82 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~--------~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~---- 82 (304)
||||+|||+...|.+||+|+++|+|+ ...+|||||||||+|. |.|.
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~----------------------~~gk~~~~ 58 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKK----------------------NRGKRDSQ 58 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCcccc----------------------cCcchHHH
Confidence 79999999525899999999999998 3356999999999992 1122
Q ss_pred ---HHHHhccccccCCcEEEEecCCcccccccccce--ee-eeceeeeeCCCceeeeccCCceecccccCCCcccccCCh
Q psy736 83 ---NWKLREKNRHKKTVVCPIIDVISDQTFEYITAK--TV-VCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPP 156 (304)
Q Consensus 83 ---~~a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
..++|.++..|+|||++++|+|+.++|++|... .+ ..|.+..+......... ........ ....+. . .
T Consensus 59 ~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~-~~~~~~~~-q~~ey~---~-~ 132 (244)
T cd04190 59 LWFFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGK-KQGPLVMY-QVFEYA---I-S 132 (244)
T ss_pred HHHHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCC-cchhHHHh-Hheehh---h-h
Confidence 236788888999999999999999999766100 00 11211111111000000 00000000 000000 0 0
Q ss_pred hhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCc-----------------ccccccHHHHHHHHHcCCeEE
Q psy736 157 REMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMD-----------------IWGGENLEMSFRVWQCGGILE 219 (304)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~-----------------~~g~ED~dl~~R~~~~G~~i~ 219 (304)
...... .......+..+.|+++++|+++++++||+.+.+. ..-+||.+|++|+.+.|+++.
T Consensus 133 ~~~~~~--~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~ 210 (244)
T cd04190 133 HWLDKA--FESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRK 210 (244)
T ss_pred hhhccc--HHHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCccE
Confidence 000000 0001112456779999999999999988764210 012699999999999999999
Q ss_pred E--EeccEEEeec
Q psy736 220 I--IPCSHVGHVF 230 (304)
Q Consensus 220 ~--~p~~~v~H~~ 230 (304)
+ .|.+.++...
T Consensus 211 ~~~~~~a~~~~~~ 223 (244)
T cd04190 211 YLYVPGAVAETDV 223 (244)
T ss_pred EEEecccEEEEEC
Confidence 9 9999987654
No 44
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.86 E-value=1.2e-22 Score=169.12 Aligned_cols=94 Identities=19% Similarity=0.148 Sum_probs=77.8
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc-
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK- 93 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A- 93 (304)
||||+||++ +.|.+||+++.+|+++...+|||||||||+|+|.++++.+... .+......+.|++.++|.|++.+
T Consensus 1 VvIp~~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~~~~~---~~~~~~~~~~gk~~aln~g~~~a~ 76 (183)
T cd06438 1 ILIPAHNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARAAGAT---VLERHDPERRGKGYALDFGFRHLL 76 (183)
T ss_pred CEEeccchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHHcCCe---EEEeCCCCCCCHHHHHHHHHHHHH
Confidence 799999999 9999999999999885445699999999999999877655432 22223345779999999998765
Q ss_pred ----CCcEEEEecCCcccccccc
Q psy736 94 ----KTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 94 ----~gd~l~flD~D~~~~~~~l 112 (304)
+||+++|+|+|+.++|+++
T Consensus 77 ~~~~~~d~v~~~DaD~~~~p~~l 99 (183)
T cd06438 77 NLADDPDAVVVFDADNLVDPNAL 99 (183)
T ss_pred hcCCCCCEEEEEcCCCCCChhHH
Confidence 5999999999999999776
No 45
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.86 E-value=5e-22 Score=161.80 Aligned_cols=95 Identities=22% Similarity=0.243 Sum_probs=80.1
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcccc-ceeecccCCCcHHHHHhcccccc
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFE-YITASDMTWGGFNWKLREKNRHK 93 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~-~i~~~~~~~~G~~~a~n~g~~~A 93 (304)
||||+||++ +.|.+||+|+++|++++ +|||||||||+|+|.+++......... ........+.|++.++|.|++.+
T Consensus 1 Viip~~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~ 77 (180)
T cd06423 1 IIVPAYNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKAGALNAGLRHA 77 (180)
T ss_pred CeecccChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHhccccceEEEEEecccCCchHHHHHHHHhc
Confidence 699999999 99999999999998754 499999999999999888776553211 22233455889999999999999
Q ss_pred CCcEEEEecCCcccccccc
Q psy736 94 KTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 94 ~gd~l~flD~D~~~~~~~l 112 (304)
++||++|+|+|+.+.++++
T Consensus 78 ~~~~i~~~D~D~~~~~~~l 96 (180)
T cd06423 78 KGDIVVVLDADTILEPDAL 96 (180)
T ss_pred CCCEEEEECCCCCcChHHH
Confidence 9999999999999998666
No 46
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.86 E-value=1e-22 Score=169.05 Aligned_cols=97 Identities=19% Similarity=0.072 Sum_probs=82.1
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccC
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKK 94 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~ 94 (304)
||||+||++ +.|.+||+|+.+|+++...+|||||||||+|+|.++++.+..............|.|++.++|.|++.|+
T Consensus 1 iii~~~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a~ 79 (185)
T cd04179 1 VVIPAYNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGFKAAR 79 (185)
T ss_pred CeecccChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCCCccHHHHHHHHHhc
Confidence 699999998 9999999999999863234699999999999999988887665443222334557899999999999999
Q ss_pred CcEEEEecCCcccccccc
Q psy736 95 TVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 95 gd~l~flD~D~~~~~~~l 112 (304)
|||++|+|+|+.+.|++|
T Consensus 80 gd~i~~lD~D~~~~~~~l 97 (185)
T cd04179 80 GDIVVTMDADLQHPPEDI 97 (185)
T ss_pred CCEEEEEeCCCCCCHHHH
Confidence 999999999999998766
No 47
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=99.85 E-value=7.2e-21 Score=179.74 Aligned_cols=198 Identities=11% Similarity=0.010 Sum_probs=126.9
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHh-cCCCCCcceEEEEeCCCCCCchHHHHHHhhccccce--eecccCCCcHHH
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVIN-RSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYI--TASDMTWGGFNW 84 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~-qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i--~~~~~~~~G~~~ 84 (304)
.+.|.+|||||+|||+ +.|.++|+|++. ++|++ +||+|+||+|+|+|.++++++..+.+... ...+....|++.
T Consensus 63 ~~~p~vaIlIPA~NE~-~vI~~~l~s~L~~ldY~~--~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~~~~gp~~Ka~ 139 (504)
T PRK14716 63 VPEKRIAIFVPAWREA-DVIGRMLEHNLATLDYEN--YRIFVGTYPNDPATLREVDRLAARYPRVHLVIVPHDGPTSKAD 139 (504)
T ss_pred CCCCceEEEEeccCch-hHHHHHHHHHHHcCCCCC--eEEEEEECCCChhHHHHHHHHHHHCCCeEEEEeCCCCCCCHHH
Confidence 4579999999999999 999999999765 45764 49999999999999999998876544321 211122246899
Q ss_pred HHhcccccc------CC---cEEEEecCCcccccccccc-------eeee-eceeeeeCCCceeeeccCCceecccccCC
Q psy736 85 KLREKNRHK------KT---VVCPIIDVISDQTFEYITA-------KTVV-CPIIDVISDQTFEYITASDMTWGGFNWKL 147 (304)
Q Consensus 85 a~n~g~~~A------~g---d~l~flD~D~~~~~~~l~~-------~~~~-~~~i~~i~~~~~~~~~~~~~~~~~~~~~~ 147 (304)
++|.+++.+ +| |+++++|+|+.++|+.|.. ..++ .|.. ..+... .....+.+...
T Consensus 140 aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~~~~~VQ~pv~-~~~~~~------~~~~ag~y~~e- 211 (504)
T PRK14716 140 CLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLLPRHDFVQLPVF-SLPRDW------GEWVAGTYMDE- 211 (504)
T ss_pred HHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcCCCCEEeccee-ccCCch------hHHHHHHHHHH-
Confidence 999997543 66 9999999999999977611 0111 1110 000000 00000000000
Q ss_pred CcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHh-----CC-CCCCCcccccccHHHHHHHHHcCCeEEEE
Q psy736 148 NFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYEL-----GS-YDEGMDIWGGENLEMSFRVWQCGGILEII 221 (304)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~i-----GG-FDe~~~~~g~ED~dl~~R~~~~G~~i~~~ 221 (304)
+.. ........ ...........|.++++||++++++ |+ ||++.- .||+|+++|+.++|+++.|.
T Consensus 212 -f~~--~~~~~l~~----r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv~y~ 281 (504)
T PRK14716 212 -FAE--SHLKDLPV----REALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQIFV 281 (504)
T ss_pred -HHH--HHHHHHHH----HHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEEEEe
Confidence 000 00000000 0000011224588899999999998 43 998852 69999999999999999999
Q ss_pred eccEE
Q psy736 222 PCSHV 226 (304)
Q Consensus 222 p~~~v 226 (304)
|.+..
T Consensus 282 p~ai~ 286 (504)
T PRK14716 282 RVRAD 286 (504)
T ss_pred ccccc
Confidence 98753
No 48
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.84 E-value=1.7e-21 Score=161.65 Aligned_cols=179 Identities=16% Similarity=0.019 Sum_probs=110.3
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCC-CCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPR-TLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK 93 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~-~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A 93 (304)
||||+||++ +.|.++|+++.+++.. ...+|||||||||+|+|.++++.+..+..+.......+|.|.+.|+|.|++.|
T Consensus 1 viIp~~n~~-~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n~G~~~a~n~g~~~a 79 (181)
T cd04187 1 IVVPVYNEE-ENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRNFGQQAALLAGLDHA 79 (181)
T ss_pred CEEeecCch-hhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCCCCcHHHHHHHHHhc
Confidence 699999999 9999999998765431 22459999999999999998888765443222222245789999999999999
Q ss_pred CCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCccccc
Q psy736 94 KTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSPLRTP 173 (304)
Q Consensus 94 ~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (304)
+|||++|+|+|+.+.++++.. ++.. ...+.-...+............. ...... ..... ......+
T Consensus 80 ~~d~i~~~D~D~~~~~~~l~~--l~~~----~~~~~~~v~g~~~~~~~~~~~~~-~~~~~~--~~~~~-----~~~~~~~ 145 (181)
T cd04187 80 RGDAVITMDADLQDPPELIPE--MLAK----WEEGYDVVYGVRKNRKESWLKRL-TSKLFY--RLINK-----LSGVDIP 145 (181)
T ss_pred CCCEEEEEeCCCCCCHHHHHH--HHHH----HhCCCcEEEEEecCCcchHHHHH-HHHHHH--HHHHH-----HcCCCCC
Confidence 999999999999998866610 0000 00000000000000000000000 000000 00000 0111334
Q ss_pred cccceeeeEehHHHhHhCCCCCCCcccccccHHHHHH
Q psy736 174 TMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFR 210 (304)
Q Consensus 174 ~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R 210 (304)
...|++++++|++|+++|+|||.+.. .++.++.++
T Consensus 146 ~~~~~~~~~~r~~~~~i~~~d~~~~~--~~~~~~~~~ 180 (181)
T cd04187 146 DNGGDFRLMDRKVVDALLLLPERHRF--LRGLIAWVG 180 (181)
T ss_pred CCCCCEEEEcHHHHHHHHhcCCCCcc--HHHHHHHhc
Confidence 45678899999999999999999863 466766543
No 49
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.83 E-value=7e-21 Score=170.64 Aligned_cols=103 Identities=16% Similarity=0.030 Sum_probs=82.6
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeec--ccCCCcHHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITAS--DMTWGGFNWKL 86 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~--~~~~~G~~~a~ 86 (304)
..|++|||||+||++ +.|.+||+++.+|.......|||||||||+|+|.++++.+........... ...|.|++.|+
T Consensus 29 ~~~~vSVVIPayNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n~Gkg~A~ 107 (306)
T PRK13915 29 AGRTVSVVLPALNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPRPGKGEAL 107 (306)
T ss_pred CCCCEEEEEecCCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccCCCHHHHH
Confidence 468999999999999 999999999998865223469999999999999998877654322111111 13478999999
Q ss_pred hccccccCCcEEEEecCCcc-cccccc
Q psy736 87 REKNRHKKTVVCPIIDVISD-QTFEYI 112 (304)
Q Consensus 87 n~g~~~A~gd~l~flD~D~~-~~~~~l 112 (304)
|.|+..|+|||++|+|+|+. ++|+++
T Consensus 108 ~~g~~~a~gd~vv~lDaD~~~~~p~~l 134 (306)
T PRK13915 108 WRSLAATTGDIVVFVDADLINFDPMFV 134 (306)
T ss_pred HHHHHhcCCCEEEEEeCccccCCHHHH
Confidence 99999999999999999996 777555
No 50
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.82 E-value=4.5e-20 Score=167.49 Aligned_cols=104 Identities=18% Similarity=0.055 Sum_probs=83.3
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCC------CCCcceEEEEeCCCCCCchHHHHHHhhcc---ccceeec-cc
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSP------RTLLKEIILVDDASERVVCPIIDVISDQT---FEYITAS-DM 77 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~------~~~~~EIIVVDdgS~d~t~~ii~~~~~~~---~~~i~~~-~~ 77 (304)
...|.+|||||+||++ +.|.++|+++.++.. +...+|||||||||+|+|.++++.+.... ...++.+ ..
T Consensus 67 ~~~~~isVVIP~yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~ 145 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLL 145 (333)
T ss_pred CCCeEEEEEEeeCCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcC
Confidence 4567899999999999 999999999876432 22346999999999999999988876542 1113322 24
Q ss_pred CCCcHHHHHhccccccCCcEEEEecCCcccccccc
Q psy736 78 TWGGFNWKLREKNRHKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 78 ~~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l 112 (304)
.|.|++.|+|.|+++|+||+++++|+|...+++.+
T Consensus 146 ~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~~~l 180 (333)
T PTZ00260 146 RNKGKGGAVRIGMLASRGKYILMVDADGATDIDDF 180 (333)
T ss_pred CCCChHHHHHHHHHHccCCEEEEEeCCCCCCHHHH
Confidence 58899999999999999999999999999888544
No 51
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.80 E-value=7.9e-20 Score=153.30 Aligned_cols=93 Identities=16% Similarity=0.213 Sum_probs=74.4
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcc--ccceeec-ccCCCcHHHHHhcccc
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQT--FEYITAS-DMTWGGFNWKLREKNR 91 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~--~~~i~~~-~~~~~G~~~a~n~g~~ 91 (304)
||||+||++ +.|.+||+|+++|+ ++ +|||||||||+|+|.++++ +.... ...+... +..+.|++.|+|.|++
T Consensus 1 ViIp~~Ne~-~~l~~~l~sl~~~~-~~--~eIivvdd~S~D~t~~~~~-~~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~ 75 (191)
T cd06436 1 VLVPCLNEE-AVIQRTLASLLRNK-PN--FLVLVIDDASDDDTAGIVR-LAITDSRVHLLRRHLPNARTGKGDALNAAYD 75 (191)
T ss_pred CEEeccccH-HHHHHHHHHHHhCC-CC--eEEEEEECCCCcCHHHHHh-heecCCcEEEEeccCCcCCCCHHHHHHHHHH
Confidence 799999999 99999999999988 43 4999999999999998887 32211 1222221 2346799999999998
Q ss_pred ccC-----------CcEEEEecCCcccccccc
Q psy736 92 HKK-----------TVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 92 ~A~-----------gd~l~flD~D~~~~~~~l 112 (304)
.++ +|+++|+|+|+.++|++|
T Consensus 76 ~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l 107 (191)
T cd06436 76 QIRQILIEEGADPERVIIAVIDADGRLDPNAL 107 (191)
T ss_pred HHhhhccccccCCCccEEEEECCCCCcCHhHH
Confidence 875 479999999999999776
No 52
>KOG2978|consensus
Probab=99.78 E-value=6.3e-19 Score=140.89 Aligned_cols=205 Identities=16% Similarity=0.137 Sum_probs=131.3
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHH---HhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc--cccceeecccCCCcHHH
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSV---INRSPRTLLKEIILVDDASERVVCPIIDVISDQ--TFEYITASDMTWGGFNW 84 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sl---l~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~--~~~~i~~~~~~~~G~~~ 84 (304)
.++-|||+|||||. +.|.-++.-+ +.+. ...+|||||||+|.|+|.++++.+++. .++..-..+....|++.
T Consensus 2 ~~kYsvilPtYnEk-~Nlpi~~~li~~~~~e~--~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d~i~l~pR~~klGLgt 78 (238)
T KOG2978|consen 2 SIKYSVILPTYNEK-ENLPIITRLIAKYMSEE--GKKYEIIIVDDASPDGTQEVAKALQKIYGEDNILLKPRTKKLGLGT 78 (238)
T ss_pred CcceeEEeccccCC-CCCeeeHHHHHhhhhhh--cCceEEEEEeCCCCCccHHHHHHHHHHhCCCcEEEEeccCcccchH
Confidence 46789999999998 7777444332 3333 345699999999999999999988754 23333344455679999
Q ss_pred HHhccccccCCcEEEEecCCcccccccccceeeeecee-eeeCCC--ceeeeccCCceecccccCCCcccccCChhhhhh
Q psy736 85 KLREKNRHKKTVVCPIIDVISDQTFEYITAKTVVCPII-DVISDQ--TFEYITASDMTWGGFNWKLNFRWYRVPPREMMR 161 (304)
Q Consensus 85 a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~~~~~~~i-~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
|.-.|+.+|+|+|++.+|+|...+|..+ |.+ ...... .+.....+....|-..|.+..+......+.+.+
T Consensus 79 Ay~hgl~~a~g~fiviMDaDlsHhPk~i-------pe~i~lq~~~~~div~GTRYa~~ggV~gW~mkRk~IS~gAn~la~ 151 (238)
T KOG2978|consen 79 AYIHGLKHATGDFIVIMDADLSHHPKFI-------PEFIRLQKEGNYDIVLGTRYAGGGGVYGWDMKRKIISRGANFLAR 151 (238)
T ss_pred HHHhhhhhccCCeEEEEeCccCCCchhH-------HHHHHHhhccCcceeeeeeEcCCCceecchhhHHHHhhhhHHHHH
Confidence 9999999999999999999999998555 100 000000 001011122222234466655544333333322
Q ss_pred cCCCCCCccccccccceeeeEehHHHhHhCC--CCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccC
Q psy736 162 RGGDRSSPLRTPTMAGGLFAIDKDYFYELGS--YDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRD 232 (304)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~irr~~f~~iGG--FDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~ 232 (304)
.. . ...+.-++|.+-+.+|++++.+=- -..+|. =-.|+..|+.+.|+.|.-+|-+.+...+..
T Consensus 152 ~l---l-~~~~sdltGsFrLykk~vl~~li~e~vSkGyv----fqmEll~ra~~~~y~IgEvPitFvdR~~Ge 216 (238)
T KOG2978|consen 152 IL---L-NPGVSDLTGSFRLYKKEVLEKLIEESVSKGYV----FQMELLARARQHGYTIGEVPITFVDRTYGE 216 (238)
T ss_pred Hh---c-cCCCccCcceeeeehHHHHHhhHHHhhccchh----hhHHHHHhccccCceEeecceEEEeecccc
Confidence 11 1 113455678888899999877511 112221 247899999999999999997776655543
No 53
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=1.1e-18 Score=145.66 Aligned_cols=99 Identities=21% Similarity=0.176 Sum_probs=86.2
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcc
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREK 89 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g 89 (304)
+|++|||||+||++ +.|.+||+|+++|++.+ +|||||||||+|+|.++++.+..............|.|...++|.|
T Consensus 2 ~~~~siiip~~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (291)
T COG0463 2 MPKVSVVIPTYNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERNGGLGAARNAG 78 (291)
T ss_pred CccEEEEEeccchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccCCChHHHHHhh
Confidence 68999999999999 99999999999999876 4999999999999999998887754333344445688999999999
Q ss_pred ccccCCcEEEEecCCcccccccc
Q psy736 90 NRHKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 90 ~~~A~gd~l~flD~D~~~~~~~l 112 (304)
+..+.|++++|+|+|.. .+..+
T Consensus 79 ~~~~~~~~~~~~d~d~~-~~~~~ 100 (291)
T COG0463 79 LEYARGDYIVFLDADDQ-HPPEL 100 (291)
T ss_pred HHhccCCEEEEEccCCC-CCHHH
Confidence 99999999999999999 77444
No 54
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.77 E-value=3.2e-18 Score=154.91 Aligned_cols=101 Identities=17% Similarity=0.084 Sum_probs=82.3
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHH---hcCCCCCcceEEEEeCCCCCCchHHHHHHhhcc-ccceeecccCCCcHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVI---NRSPRTLLKEIILVDDASERVVCPIIDVISDQT-FEYITASDMTWGGFNW 84 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll---~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~-~~~i~~~~~~~~G~~~ 84 (304)
.++++|||||+||++ +.|.++++++. +|... .+|||||||||+|+|.++++++.+.. .+.+......|.|...
T Consensus 4 ~~~~vSVVIP~yNE~-~~i~~~l~~l~~~~~~~~~--~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n~G~~~ 80 (325)
T PRK10714 4 PIKKVSVVIPVYNEQ-ESLPELIRRTTAACESLGK--EYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRNYGQHS 80 (325)
T ss_pred CCCeEEEEEcccCch-hhHHHHHHHHHHHHHhCCC--CEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCCCCHHH
Confidence 356799999999999 99999998874 35443 45999999999999999988876542 2333333455889999
Q ss_pred HHhccccccCCcEEEEecCCcccccccc
Q psy736 85 KLREKNRHKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 85 a~n~g~~~A~gd~l~flD~D~~~~~~~l 112 (304)
|+|.|+++|+||+++++|+|...+|+.+
T Consensus 81 A~~~G~~~A~gd~vv~~DaD~q~~p~~i 108 (325)
T PRK10714 81 AIMAGFSHVTGDLIITLDADLQNPPEEI 108 (325)
T ss_pred HHHHHHHhCCCCEEEEECCCCCCCHHHH
Confidence 9999999999999999999999998655
No 55
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=99.75 E-value=4.7e-18 Score=148.45 Aligned_cols=201 Identities=12% Similarity=0.038 Sum_probs=113.6
Q ss_pred eEEEEEeeCCChHHHHHHHHHHHh----cCCCCCcceEEEEeCCCCCCchHHHH-----HHhhccc---cceeecccCCC
Q psy736 13 TSIVIVFHNEAWSTLLRTVWSVIN----RSPRTLLKEIILVDDASERVVCPIID-----VISDQTF---EYITASDMTWG 80 (304)
Q Consensus 13 vSIIIp~yN~~~~~L~~~l~Sll~----qt~~~~~~EIIVVDdgS~d~t~~ii~-----~~~~~~~---~~i~~~~~~~~ 80 (304)
|||+||+||++.+.|..+|.+..+ |.+++ .+||+|+||++++... +.+ .+.++.. .........|.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~-~~~~~~~~~l~~~~~~~~~v~~~~r~~~~ 78 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW-LAEEAAWLDLCEELGAQGRIYYRRRRENT 78 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH-HHHHHHHHHHHHHhCCCCcEEEEEcCCCC
Confidence 699999999994448889988765 55522 3699999998765432 221 1322221 11112223344
Q ss_pred cH-HHHHhccccc--cCCcEEEEecCCcccccccccce--ee-eeceeeeeCCCceeeeccCCceecccccCCCcccccC
Q psy736 81 GF-NWKLREKNRH--KKTVVCPIIDVISDQTFEYITAK--TV-VCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRV 154 (304)
Q Consensus 81 G~-~~a~n~g~~~--A~gd~l~flD~D~~~~~~~l~~~--~~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (304)
|+ +.++|..... +++||++++|+|..+.|+.|... .+ ..|.+..+........ .+.. ..+...+
T Consensus 79 g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n--~~~~--------~~~~~~~ 148 (254)
T cd04191 79 GRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIG--AETL--------FARLQQF 148 (254)
T ss_pred CccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeEC--CCCH--------HHHHHHH
Confidence 54 5667767665 78999999999999999776110 01 1233332221111000 0000 0000000
Q ss_pred Chhhh---hhcCCCCCCccccccccceeeeEehHHHhHhCCCCC--CCccc----ccccHHHHHHHHHcCCeEEEEeccE
Q psy736 155 PPREM---MRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDE--GMDIW----GGENLEMSFRVWQCGGILEIIPCSH 225 (304)
Q Consensus 155 ~~~~~---~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe--~~~~~----g~ED~dl~~R~~~~G~~i~~~p~~~ 225 (304)
..... ...+... .........|.++++||+.|+++|||++ ++..| -.||.++++|+..+||++.|.|.+.
T Consensus 149 ~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~ 227 (254)
T cd04191 149 ANRLYGPVFGRGLAA-WQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLE 227 (254)
T ss_pred HHHHHHHHHHHHHHH-hcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCc
Confidence 00000 0000000 0011234569999999999999766643 22222 2699999999999999999999875
Q ss_pred E
Q psy736 226 V 226 (304)
Q Consensus 226 v 226 (304)
.
T Consensus 228 ~ 228 (254)
T cd04191 228 G 228 (254)
T ss_pred c
Confidence 3
No 56
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.74 E-value=9e-18 Score=164.92 Aligned_cols=200 Identities=11% Similarity=0.015 Sum_probs=126.6
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHH-hcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccc--eeecccCCCcHHH
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVI-NRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEY--ITASDMTWGGFNW 84 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll-~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~--i~~~~~~~~G~~~ 84 (304)
...|.+||+||+|||+ ..+.+++++++ +++||+ +||+|+++++++.|.++++.+.++..+. +......++|++.
T Consensus 60 ~~~~~vsIlVPa~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~~g~~gKa~ 136 (727)
T PRK11234 60 PDEKPLAIMVPAWNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVCARFPNVHKVVCARPGPTSKAD 136 (727)
T ss_pred CCCCCEEEEEecCcch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCCCCCCCHHH
Confidence 4568999999999999 99999999987 578886 4999999988888999999987765433 2222233679999
Q ss_pred HHhcccccc-------CC--cEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCce--ecccc---cCCCcc
Q psy736 85 KLREKNRHK-------KT--VVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMT--WGGFN---WKLNFR 150 (304)
Q Consensus 85 a~n~g~~~A-------~g--d~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~--~~~~~---~~~~~~ 150 (304)
++|.++..+ ++ +++++.|+|+.+.|+.|. ...... +...+......+.. +...- ....+.
T Consensus 137 aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~---~~~~l~---~~~~~VQ~p~~p~~~~~~~~~~~~~~~EFa 210 (727)
T PRK11234 137 CLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR---LFNYLV---ERKDLIQIPVYPFEREWTHFTSGTYIDEFA 210 (727)
T ss_pred HHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH---HHHhhc---CCCCeEeecccCCCccHHHHHHHHHHHHHH
Confidence 999998776 33 567779999999997772 001100 00000000000000 00000 000000
Q ss_pred cccCChhhhhhcCCCCCCccccccccceeeeE-eh--HHHhHhC---CCCCCCcccccccHHHHHHHHHcCCeEEEEecc
Q psy736 151 WYRVPPREMMRRGGDRSSPLRTPTMAGGLFAI-DK--DYFYELG---SYDEGMDIWGGENLEMSFRVWQCGGILEIIPCS 224 (304)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~i-rr--~~f~~iG---GFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~ 224 (304)
.. .......+ .... ......|..+++ || +.+.++| +|+++.- .||+|+++|+.++|+++.+.|..
T Consensus 211 ~~-~~~~~~~~---~~lg--g~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v~f~~~~ 281 (727)
T PRK11234 211 EL-HGKDVPVR---EALA--GQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMREIFVRFP 281 (727)
T ss_pred HH-hhhhhHHH---HHcC--CCcccCCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEEEEcccc
Confidence 00 00000000 0000 112356778888 77 4688888 6888863 69999999999999999999944
Q ss_pred E
Q psy736 225 H 225 (304)
Q Consensus 225 ~ 225 (304)
.
T Consensus 282 v 282 (727)
T PRK11234 282 V 282 (727)
T ss_pred c
Confidence 3
No 57
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.71 E-value=1.4e-16 Score=126.33 Aligned_cols=154 Identities=16% Similarity=0.187 Sum_probs=113.3
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccC
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKK 94 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~ 94 (304)
||||++|+. +.+..++.|+.++++. ..||+|+||+|++.+.+.+..+..............+.|.+.++|.++..+.
T Consensus 1 iii~~~~~~-~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 77 (156)
T cd00761 1 VIIPAYNEE-PYLERCLESLLAQTYP--NFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAAR 77 (156)
T ss_pred CEEeecCcH-HHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCCCChHHHHHHHHHHhc
Confidence 689999998 9999999999999864 3499999999999988877766553122233334557899999999999999
Q ss_pred CcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCCcccccc
Q psy736 95 TVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSPLRTPT 174 (304)
Q Consensus 95 gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (304)
+++++++|+|+.+.++.+... . ... ....+ . ....
T Consensus 78 ~d~v~~~d~D~~~~~~~~~~~--~-~~~-~~~~~-------~----------------------------------~~v~ 112 (156)
T cd00761 78 GEYILFLDADDLLLPDWLERL--V-AEL-LADPE-------A----------------------------------DAVG 112 (156)
T ss_pred CCEEEEECCCCccCccHHHHH--H-HHH-hcCCC-------c----------------------------------eEEe
Confidence 999999999998876554100 0 000 00000 0 0000
Q ss_pred ccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeE
Q psy736 175 MAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGIL 218 (304)
Q Consensus 175 ~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i 218 (304)
..++++++++.|+++|+|++....+ +||.+++.++.+.|+.+
T Consensus 113 -~~~~~~~~~~~~~~~~~~~~~~~~~-~ed~~~~~~~~~~g~~~ 154 (156)
T cd00761 113 -GPGNLLFRRELLEEIGGFDEALLSG-EEDDDFLLRLLRGGKVA 154 (156)
T ss_pred -ccchheeeHHHHHHhCCcchHhcCC-cchHHHHHHHHhhcccc
Confidence 0067889999999999999987654 79999999999888654
No 58
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.69 E-value=4.8e-17 Score=140.30 Aligned_cols=89 Identities=25% Similarity=0.195 Sum_probs=75.6
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccc
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNR 91 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~ 91 (304)
++|||||+||++ +.|.+||+|+..|+ .|||||||||+|+|.++++.... +.+.. .+.|++.++|.|+.
T Consensus 1 ~isvii~~~Ne~-~~l~~~l~sl~~~~-----~eiivvD~gStD~t~~i~~~~~~---~v~~~---~~~g~~~~~n~~~~ 68 (229)
T cd02511 1 TLSVVIITKNEE-RNIERCLESVKWAV-----DEIIVVDSGSTDRTVEIAKEYGA---KVYQR---WWDGFGAQRNFALE 68 (229)
T ss_pred CEEEEEEeCCcH-HHHHHHHHHHhccc-----CEEEEEeCCCCccHHHHHHHcCC---EEEEC---CCCChHHHHHHHHH
Confidence 489999999999 99999999998774 29999999999999988774322 22222 58899999999999
Q ss_pred ccCCcEEEEecCCcccccccc
Q psy736 92 HKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 92 ~A~gd~l~flD~D~~~~~~~l 112 (304)
.|+|||++++|+|..++|+.+
T Consensus 69 ~a~~d~vl~lDaD~~~~~~~~ 89 (229)
T cd02511 69 LATNDWVLSLDADERLTPELA 89 (229)
T ss_pred hCCCCEEEEEeCCcCcCHHHH
Confidence 999999999999999988555
No 59
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=99.62 E-value=5.4e-15 Score=144.72 Aligned_cols=206 Identities=12% Similarity=0.007 Sum_probs=118.1
Q ss_pred CCCCCeEEEEEeeCCCh----HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHH----HHHHhhccc---cceeecc
Q psy736 8 TFLPTTSIVIVFHNEAW----STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPI----IDVISDQTF---EYITASD 76 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~----~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~i----i~~~~~~~~---~~i~~~~ 76 (304)
...|+|+|+||+|||+. +.|+.+++|+.+|.+++ .+||+|+||+++|++... ++++.++.. +......
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R 199 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRR 199 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 34688999999999982 25888999998887754 469999999999886532 223333221 1111112
Q ss_pred cCCCc-HHHHHhccccc--cCCcEEEEecCCcccccccccce---eeeeceeeeeCCCceeeeccCCceecccccCCCcc
Q psy736 77 MTWGG-FNWKLREKNRH--KKTVVCPIIDVISDQTFEYITAK---TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFR 150 (304)
Q Consensus 77 ~~~~G-~~~a~n~g~~~--A~gd~l~flD~D~~~~~~~l~~~---~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (304)
..|.| ++..+|...+. +++||++.+|+|+.++++.+.+. ....|.+..+....... +...+ ..+
T Consensus 200 ~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~--------n~~sl--faR 269 (691)
T PRK05454 200 RRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAV--------GADTL--FAR 269 (691)
T ss_pred CcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCc--------CCCCH--HHH
Confidence 22333 44556655766 66799999999999999776110 00123332221111000 00000 000
Q ss_pred cccCChhh---hhhcCCCCCCccccccccceeeeEehHHHhHhCCCCC--CCcccc----cccHHHHHHHHHcCCeEEEE
Q psy736 151 WYRVPPRE---MMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDE--GMDIWG----GENLEMSFRVWQCGGILEII 221 (304)
Q Consensus 151 ~~~~~~~~---~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe--~~~~~g----~ED~dl~~R~~~~G~~i~~~ 221 (304)
........ ....+...... ......|.|.++||+.|.++||+.+ +...|+ .||.+.+.+++.+||++.|.
T Consensus 270 ~qqf~~~~y~~~~~~G~~~w~~-~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~ 348 (691)
T PRK05454 270 LQQFATRVYGPLFAAGLAWWQG-GEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLA 348 (691)
T ss_pred HHHHHHHHHHHHHHhhhhhhcc-CccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEc
Confidence 00000000 00000000000 1223568999999999999876543 222222 58999999999999999999
Q ss_pred eccE
Q psy736 222 PCSH 225 (304)
Q Consensus 222 p~~~ 225 (304)
|+..
T Consensus 349 pd~~ 352 (691)
T PRK05454 349 PDLP 352 (691)
T ss_pred Cccc
Confidence 9853
No 60
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.61 E-value=3.6e-15 Score=145.08 Aligned_cols=189 Identities=12% Similarity=0.097 Sum_probs=114.7
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHH-hcCCCCCcceEEEE---eCCCCCCchHHHHHHhhcccc--ceeecccCCCc
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVI-NRSPRTLLKEIILV---DDASERVVCPIIDVISDQTFE--YITASDMTWGG 81 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll-~qt~~~~~~EIIVV---DdgS~d~t~~ii~~~~~~~~~--~i~~~~~~~~G 81 (304)
...|.+||+||+|||+ +.|.+++++++ +++||++ ||+|+ ||+ +|.+.++.+....+. .+...+....|
T Consensus 68 ~~~~~vsIlVPa~nE~-~VI~~~v~~ll~~ldYp~~--~I~v~~~~nD~---~T~~~~~~~~~~~p~~~~v~~~~~gp~g 141 (703)
T PRK15489 68 RDEQPLAIMVPAWKEY-DVIAKMIENMLATLDYRRY--VIFVGTYPNDA---ETITEVERMRRRYKRLVRVEVPHDGPTC 141 (703)
T ss_pred cCCCceEEEEeCCCcH-HHHHHHHHHHHhcCCCCCe--EEEEEecCCCc---cHHHHHHHHhccCCcEEEEEcCCCCCCC
Confidence 3468899999999999 99999999987 5688854 99994 555 566677777655432 23323333468
Q ss_pred HHHHHhcccccc-------CCcE--EEEecCCccccccccc--------ceeeeeceeeeeCCCceeeeccCCceecccc
Q psy736 82 FNWKLREKNRHK-------KTVV--CPIIDVISDQTFEYIT--------AKTVVCPIIDVISDQTFEYITASDMTWGGFN 144 (304)
Q Consensus 82 ~~~a~n~g~~~A-------~gd~--l~flD~D~~~~~~~l~--------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~ 144 (304)
++.|+|.++..+ .+++ +++.|+|+.++|+.|. ...+..|... ...+.....+ +-+.
T Consensus 142 Ka~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~~~~~~~~~~iQ~pV~~-~~~~~~~~l~------~~~~ 214 (703)
T PRK15489 142 KADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYFNYLLPRKDLVQLPVLS-LERKWYEWVA------GTYM 214 (703)
T ss_pred HHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHHHhhcCCcceeeeeecc-CCCccccHHH------HHHH
Confidence 999999998765 4444 8999999999996661 1111111111 0000000000 0000
Q ss_pred cCCCcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHh---C---CCCCCCcccccccHHHHHHHHHcCCeE
Q psy736 145 WKLNFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYEL---G---SYDEGMDIWGGENLEMSFRVWQCGGIL 218 (304)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~i---G---GFDe~~~~~g~ED~dl~~R~~~~G~~i 218 (304)
.. +. ......+..+ ..... .+| .+|...++||++++++ | +||.+.- -||.|+++|+.+.|+++
T Consensus 215 ~E--fa--~~~~~~l~~r-~~l~~--~ip-l~Gv~~~frr~aL~~l~~~gg~~~~n~~sL---TED~Dlg~RL~~~G~r~ 283 (703)
T PRK15489 215 DE--FA--EWHQKDLVVR-ESLTG--TVP-SAGVGTCFSRRALLALMKERGNQPFNTSSL---TEDYDFSFRLAELGMQE 283 (703)
T ss_pred HH--HH--HHhhhHHHHH-HHcCC--cee-ccCcceeeeHHHHHHHHHhcCCCCCCCCCc---hHhHHHHHHHHHCCCce
Confidence 00 00 0000000000 00111 222 4566777899999887 5 4776653 49999999999999999
Q ss_pred EE
Q psy736 219 EI 220 (304)
Q Consensus 219 ~~ 220 (304)
.+
T Consensus 284 ~f 285 (703)
T PRK15489 284 IF 285 (703)
T ss_pred EE
Confidence 88
No 61
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=99.58 E-value=7.7e-14 Score=117.27 Aligned_cols=161 Identities=16% Similarity=0.173 Sum_probs=104.1
Q ss_pred CeEEEEEeeCCChHHHHHHHHHH---HhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhc
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSV---INRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLRE 88 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sl---l~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~ 88 (304)
++.||||.+|+. +.|...+.-+ |+... +.+.|.||+.-.. . .. | .++.+|.
T Consensus 3 ~~aiivpyr~R~-~~l~~~l~~~~~~L~rq~--~~~~i~vi~Q~~~-~-----------~F---------N--R~~llNv 56 (219)
T cd00899 3 KVAIIVPFRNRF-EHLLIFLPHLHPFLQRQQ--LDYRIFVIEQVGN-F-----------RF---------N--RAKLLNV 56 (219)
T ss_pred ceEEEEecCCHH-HHHHHHHHHHHHHHHhcC--CcEEEEEEEecCC-c-----------cc---------h--hhhhhhH
Confidence 689999999998 9998877654 44432 5568888886311 1 01 1 1455666
Q ss_pred ccccc----CCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCC
Q psy736 89 KNRHK----KTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGG 164 (304)
Q Consensus 89 g~~~A----~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
|...| ..++++|-|.|..+..+.... .++. .+..+. .+.+ ..
T Consensus 57 G~~~a~k~~~~dc~i~hDVDllP~~~~~~y---~~~~----~p~H~s---------~~~~-~~----------------- 102 (219)
T cd00899 57 GFLEALKDGDWDCFIFHDVDLLPENDRNLY---GCEE----GPRHLS---------VPLD-KF----------------- 102 (219)
T ss_pred HHHHHhhcCCccEEEEecccccccCccccc---cCCC----CCeEEE---------Eeec-cc-----------------
Confidence 54333 457899999998776543300 0000 000000 0000 00
Q ss_pred CCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccE--EEeeccCCC
Q psy736 165 DRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSH--VGHVFRDKS 234 (304)
Q Consensus 165 ~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~--v~H~~r~~~ 234 (304)
....| .....||+++++|+.|.++||||++|..||+||.||+.|++.+|.++.-.+.+. ..|.++.+.
T Consensus 103 ~~~lp--y~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~ 172 (219)
T cd00899 103 HYKLP--YKTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHD 172 (219)
T ss_pred ccccC--cccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCC
Confidence 11112 224568999999999999999999999999999999999999999988888644 566665543
No 62
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=99.55 E-value=4.4e-14 Score=120.48 Aligned_cols=198 Identities=13% Similarity=0.135 Sum_probs=97.0
Q ss_pred eEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccc
Q psy736 13 TSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRH 92 (304)
Q Consensus 13 vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~ 92 (304)
||||+++.|+ +.+.+|+.+|.++..++ .|.|-||+-.. ..+.+.+.|.|+++
T Consensus 1 isiI~c~n~~--~~~~~~~~~i~~~~~~~--~~~i~i~~~~~------------------------~~s~~~~yN~a~~~ 52 (217)
T PF13712_consen 1 ISIIICVNDE--ELYEECLRSIKRLIGPP--GELIEIDNVRN------------------------AKSMAAAYNEAMEK 52 (217)
T ss_dssp EEEEEEES-H--HHHHHHHHHHHHTT--T--EEEEEEE-SSS-------------------------S-TTTHHHHHGGG
T ss_pred CEEEEEECCH--HHHHHHHHHHHhhCCCC--ceEEEEeccCC------------------------CcCHHHHHHHHHHh
Confidence 5777777554 58999999988876654 38887777311 12447899999999
Q ss_pred cCCcEEEEecCCccccc-ccc---------cceeeeeceeeeeCCCceeeeccCCceeccc---ccCCCccc--ccCChh
Q psy736 93 KKTVVCPIIDVISDQTF-EYI---------TAKTVVCPIIDVISDQTFEYITASDMTWGGF---NWKLNFRW--YRVPPR 157 (304)
Q Consensus 93 A~gd~l~flD~D~~~~~-~~l---------~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~ 157 (304)
|+++|++|++.|+.+.. +++ ++..-+.+.+ +.......+ ..|.+. .....+.. ...+..
T Consensus 53 a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGva---G~~~~~~~~---~~w~~~~~~g~~~~~~~~~~~~~~~ 126 (217)
T PF13712_consen 53 AKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVA---GSKRLPPNG---VWWESPNKVGKVREYGRIMHGHGPN 126 (217)
T ss_dssp --SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESE---EEESS-S-T---TS---EEEEEETTEEEE----E---
T ss_pred CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEee---cCCcCCCCC---ccccccccccccccccccccccccc
Confidence 99999999999999875 333 1111111111 111110000 000000 00000000 000000
Q ss_pred hh--hhcCC-CCCCccccccccceeeeEehHHHhHhCCCCCC-CcccccccHHHHHHHHHcCCeEEEEeccEEEeeccCC
Q psy736 158 EM--MRRGG-DRSSPLRTPTMAGGLFAIDKDYFYELGSYDEG-MDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRDK 233 (304)
Q Consensus 158 ~~--~~~~~-~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~-~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~~ 233 (304)
.. ..... ....+.++..+.|.+|+++|+++ +|||+ |..|.+-|+|+|++++++|+++ +++...+.|.-...
T Consensus 127 ~~~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v-~~~~~~~~H~s~g~ 201 (217)
T PF13712_consen 127 SAGEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRV-VVPPPWCIHFSGGS 201 (217)
T ss_dssp ----------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EE-EE-----EE-S---
T ss_pred ccccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEE-EecCceEEEcCCCC
Confidence 00 00000 01245677888999999999999 99999 6667779999999999999998 55567788875433
Q ss_pred CCccCCCCchHHHHHHHHHHHHhh
Q psy736 234 SPYTFPGGVSKIVLHNAARVAEVW 257 (304)
Q Consensus 234 ~~~~~~~~~~~~~~~n~~r~~~~w 257 (304)
.. +...+.+.++.++|
T Consensus 202 ~~--------~~~~~~~~~~~~ky 217 (217)
T PF13712_consen 202 FD--------ENYYEARKKFLRKY 217 (217)
T ss_dssp -S--------HHHHHHHHHHHHHH
T ss_pred cc--------HhHHHHHHHHHhhC
Confidence 11 23455666665554
No 63
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=99.32 E-value=9.4e-13 Score=93.30 Aligned_cols=58 Identities=33% Similarity=0.662 Sum_probs=43.9
Q ss_pred ccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEE-Eeec
Q psy736 173 PTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHV-GHVF 230 (304)
Q Consensus 173 ~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v-~H~~ 230 (304)
+...|++++++|+.|.++|||||.|..||+||.||+.|+..+|.++...|...+ +|.+
T Consensus 17 ~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~~yh~~ 75 (78)
T PF02709_consen 17 PNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIGRYHLW 75 (78)
T ss_dssp TT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTTEEEEE
T ss_pred CCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceEEEEEe
Confidence 456789999999999999999999999999999999999999999888776654 5665
No 64
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=99.30 E-value=1.2e-11 Score=111.10 Aligned_cols=192 Identities=16% Similarity=0.101 Sum_probs=115.4
Q ss_pred eEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecc--cCC----------C
Q psy736 13 TSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASD--MTW----------G 80 (304)
Q Consensus 13 vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~--~~~----------~ 80 (304)
+.|||++||++ ++|.+||+||++|.+....+||||.+||+.+++.++++..... .+.+.... ..+ .
T Consensus 2 ~PVlv~ayNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~~~~-i~~i~~~~~~~~~~~~~~~~~~y~ 79 (334)
T cd02514 2 IPVLVIACNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSFGDG-VTHIQHPPISIKNVNPPHKFQGYY 79 (334)
T ss_pred cCEEEEecCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhhccc-cEEEEcccccccccCcccccchhh
Confidence 57999999999 9999999999998533345699999999998877776655321 12232211 112 2
Q ss_pred cHHH----HHhccccccCCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCCh
Q psy736 81 GFNW----KLREKNRHKKTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPP 156 (304)
Q Consensus 81 G~~~----a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
+.++ |+|..+..++++++++|++|+++.|+.+..-....+.. .-++ ......+... .|. . ....
T Consensus 80 ~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y-~~D~-~v~~ISa~Nd--nG~------~--~~~~ 147 (334)
T cd02514 80 RIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLL-EEDP-SLWCISAWND--NGK------E--HFVD 147 (334)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHH-hcCC-CEEEEEeecc--CCc------c--cccC
Confidence 3344 88999888899999999999999996550000000000 0000 0100000000 000 0 0000
Q ss_pred hhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHH-HHcCCeEEEEecc-EEEeecc
Q psy736 157 REMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRV-WQCGGILEIIPCS-HVGHVFR 231 (304)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~-~~~G~~i~~~p~~-~v~H~~r 231 (304)
......+.+..+.|...|++|+.|+++ ++... .-|+|+.+|. -+.-+|-...|++ +..|..+
T Consensus 148 -------~~~~~lyrs~ff~glGWml~r~~W~e~---~~~wp---~~~WD~w~R~~~~rkgr~cirPeisRt~~~g~ 211 (334)
T cd02514 148 -------DTPSLLYRTDFFPGLGWMLTRKLWKEL---EPKWP---KAFWDDWMRLPEQRKGRECIRPEISRTYHFGK 211 (334)
T ss_pred -------CCcceEEEecCCCchHHHHHHHHHHHh---CCCCC---CCChHHhhcchhhhcCCccccCCcchheeccc
Confidence 001223345566666678899999998 66543 3599999997 3444466677765 5777654
No 65
>KOG2977|consensus
Probab=99.28 E-value=6.5e-12 Score=107.26 Aligned_cols=93 Identities=19% Similarity=0.120 Sum_probs=70.7
Q ss_pred CeEEEEEeeCCChHHH----HHHHHHHHhc--CCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeecc-cCCCcHH
Q psy736 12 TTSIVIVFHNEAWSTL----LRTVWSVINR--SPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASD-MTWGGFN 83 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L----~~~l~Sll~q--t~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~-~~~~G~~ 83 (304)
.+|||||+||++ ..| ..|+.++-.. ..+++.+|||||||||+|.|.++.-.+..+ ..+.++... ..|.|.+
T Consensus 68 ~lsVIVpaynE~-~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~nrgKG 146 (323)
T KOG2977|consen 68 YLSVIVPAYNEE-GRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKNRGKG 146 (323)
T ss_pred eeEEEEecCCcc-cchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhccCCCC
Confidence 699999999998 654 4456665432 223466799999999999999888777632 334444432 2478999
Q ss_pred HHHhccccccCCcEEEEecCCc
Q psy736 84 WKLREKNRHKKTVVCPIIDVIS 105 (304)
Q Consensus 84 ~a~n~g~~~A~gd~l~flD~D~ 105 (304)
.|.+.|+-.++|++++|.|||-
T Consensus 147 gAvR~g~l~~rG~~ilfadAdG 168 (323)
T KOG2977|consen 147 GAVRKGMLSSRGQKILFADADG 168 (323)
T ss_pred cceehhhHhccCceEEEEcCCC
Confidence 9999999999999999999985
No 66
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.10 E-value=2.1e-10 Score=95.96 Aligned_cols=56 Identities=20% Similarity=0.343 Sum_probs=48.0
Q ss_pred cccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 172 TPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 172 ~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
...+.|+++++|+++++++|||| +.... +||.|+++|+.++|+++.++|++.++|.
T Consensus 69 ~~~~~G~~~~~r~~~l~~vg~~~-~~~~~-~ED~~l~~~l~~~G~~~~~~~~~~~~~~ 124 (193)
T PF13632_consen 69 PLFLSGSGMLFRREALREVGGFD-DPFSI-GEDMDLGFRLRRAGYRIVYVPDAIVYTE 124 (193)
T ss_pred CccccCcceeeeHHHHHHhCccc-ccccc-cchHHHHHHHHHCCCEEEEecccceeee
Confidence 34567999999999999999999 33344 5999999999999999999999977655
No 67
>KOG3588|consensus
Probab=99.03 E-value=3.4e-09 Score=93.63 Aligned_cols=205 Identities=15% Similarity=0.149 Sum_probs=121.3
Q ss_pred CCCCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCC-CCch--HHHHHHhhccccceeecccCCCcH
Q psy736 6 YPTFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASE-RVVC--PIIDVISDQTFEYITASDMTWGGF 82 (304)
Q Consensus 6 y~~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~-d~t~--~ii~~~~~~~~~~i~~~~~~~~G~ 82 (304)
-+-+.|.|.+|+|-..+. ..+.+..+++-.....+ .+++||==|++ |+-+ +.+..+.....+. ..+.. |+-|
T Consensus 224 ~~i~~pgih~i~pl~gr~-~~f~rf~q~~c~~~d~~--l~l~vv~f~~se~e~ak~e~~tslra~f~~~-q~l~l-ngeF 298 (494)
T KOG3588|consen 224 TLIEDPGIHMIMPLRGRA-AIFARFAQSICARGDDR--LALSVVYFGYSEDEMAKRETITSLRASFIPV-QFLGL-NGEF 298 (494)
T ss_pred ccccCCCceEEEeccchH-HHhhhhhHHHhccCCCc--eEEEEEEecCCChHHHhhhHHHHHhhcCCce-EEecc-cchh
Confidence 345678999999999998 99999888875544333 37777765553 3311 1222333332222 12221 2224
Q ss_pred --HHHHhccccccCCcEEEE-ecCCcccccccccc--------eeeeeceeeeeCCCceeeeccCCceecccccCCCccc
Q psy736 83 --NWKLREKNRHKKTVVCPI-IDVISDQTFEYITA--------KTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRW 151 (304)
Q Consensus 83 --~~a~n~g~~~A~gd~l~f-lD~D~~~~~~~l~~--------~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (304)
+.|+..|++.-+.+.|+| .|.|..+.-+.|++ ..+--|.+...-. +..+.+.+
T Consensus 299 SRa~aL~vGAe~~~~nvLLFfcDVDi~FT~efL~rcr~Nt~~gkqiyfPivFS~yn---------p~ivy~~~------- 362 (494)
T KOG3588|consen 299 SRAKALMVGAETLNANVLLFFCDVDIYFTTEFLNRCRLNTILGKQIYFPIVFSQYN---------PEIVYEQD------- 362 (494)
T ss_pred hhhHHHHhhHHHhccceeEEEeccceeehHHHHHHHhhccCCCceEEEEEEEeecC---------cceeecCC-------
Confidence 567889988886766655 58899888877721 1122232221100 01111100
Q ss_pred ccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeecc
Q psy736 152 YRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFR 231 (304)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r 231 (304)
...|...... ......+--...- |....-|+.|-.+||||+....||+||+||-.+..+.|.+++=.|+.-+.|.++
T Consensus 363 ~~~p~e~~~~--~~~~tGfwRdfGf-Gmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~H~~H 439 (494)
T KOG3588|consen 363 KPLPAEQQLV--IKKDTGFWRDFGF-GMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLFHLWH 439 (494)
T ss_pred CCCchhHhee--eccccccccccCC-ceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceEEeec
Confidence 0111111000 0011111111111 233458899999999999999999999999999999999999999999999987
Q ss_pred CCC
Q psy736 232 DKS 234 (304)
Q Consensus 232 ~~~ 234 (304)
..+
T Consensus 440 ~~~ 442 (494)
T KOG3588|consen 440 PKR 442 (494)
T ss_pred ccc
Confidence 643
No 68
>KOG3916|consensus
Probab=98.98 E-value=4.5e-09 Score=92.14 Aligned_cols=155 Identities=20% Similarity=0.260 Sum_probs=97.1
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHH---HhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSV---INRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sl---l~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
-+|.||||.+|++ ++|...|.-+ |+++- +.+-|+||+..-++. ++ .++.+|
T Consensus 151 ~kvAIIIPfR~Re-~HL~~~l~~LhP~LqrQr--L~y~iyVieQ~g~~~------------FN-----------RakL~N 204 (372)
T KOG3916|consen 151 HKVAIIIPFRNRE-EHLRYLLHHLHPFLQRQR--LDYRIYVIEQAGNKP------------FN-----------RAKLLN 204 (372)
T ss_pred ceeEEEeecccHH-HHHHHHHHHhhHHHHhhh--hceeEEEEEecCCCc------------cc-----------HHHhhh
Confidence 3699999999998 8888876554 55443 456999999865554 11 155666
Q ss_pred ccccccC----CcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcC
Q psy736 88 EKNRHKK----TVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRG 163 (304)
Q Consensus 88 ~g~~~A~----gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
.|...|- =|-++|-|-|..+..+. ..-.||.. +..+. .....+
T Consensus 205 VGf~eAlkd~~wdCfIFHDVDllPenDr---NlY~C~~~----PRH~s------va~dk~-------------------- 251 (372)
T KOG3916|consen 205 VGFLEALKDYGWDCFIFHDVDLLPENDR---NLYGCPEQ----PRHMS------VALDKF-------------------- 251 (372)
T ss_pred hHHHHHHHhcCCCEEEEecccccccCCC---CccCCCCC----Ccchh------hhhhhc--------------------
Confidence 6644433 36677888876554311 00111100 00000 000000
Q ss_pred CCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEe
Q psy736 164 GDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGH 228 (304)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 228 (304)
....| ....-||..++.++-|.+|+||...|..|||||-|+.-|+..+|++|- -|...+.+
T Consensus 252 -gy~LP--Y~~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~Is-Rp~~~igr 312 (372)
T KOG3916|consen 252 -GYRLP--YKEYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKIS-RPPPEIGR 312 (372)
T ss_pred -ccccc--chhhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceee-cCCCccce
Confidence 00111 123347888999999999999999999999999999999999999864 34444333
No 69
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=98.92 E-value=9.6e-10 Score=90.74 Aligned_cols=132 Identities=14% Similarity=0.170 Sum_probs=78.1
Q ss_pred cHHHHHhccccc-cCCcEEEEecCCcccccccccce--eeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChh
Q psy736 81 GFNWKLREKNRH-KKTVVCPIIDVISDQTFEYITAK--TVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPR 157 (304)
Q Consensus 81 G~~~a~n~g~~~-A~gd~l~flD~D~~~~~~~l~~~--~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
++...+..++++ |++|+++|+|+|+.++|+.|... .+..|.++.+..-.+.. .....+.... .........
T Consensus 17 ~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~~p~vglVt~~~~~~--~~~~~~~~l~----~~~~~~~~~ 90 (175)
T PF13506_consen 17 PKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLADPGVGLVTGLPRGV--PARGFWSRLE----AAFFNFLPG 90 (175)
T ss_pred hHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHhCCCCcEEEeccccc--CCcCHHHHHH----HHHHhHHHH
Confidence 456677777787 99999999999999999777100 01112222211110000 0000000000 000000000
Q ss_pred hhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEE
Q psy736 158 EMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHV 226 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v 226 (304)
.+.. ........|++|++||+.++++|||+. +.-+-.||..|+.++++.|+++.+.|...+
T Consensus 91 ~~~a-------~~~~~~~~G~~m~~rr~~L~~~GG~~~-l~~~ladD~~l~~~~~~~G~~v~~~~~~v~ 151 (175)
T PF13506_consen 91 VLQA-------LGGAPFAWGGSMAFRREALEEIGGFEA-LADYLADDYALGRRLRARGYRVVLSPYPVV 151 (175)
T ss_pred HHHH-------hcCCCceecceeeeEHHHHHHcccHHH-HhhhhhHHHHHHHHHHHCCCeEEEcchhee
Confidence 0000 113456779999999999999999987 111237999999999999999999997654
No 70
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=98.85 E-value=9.3e-09 Score=87.22 Aligned_cols=186 Identities=12% Similarity=0.116 Sum_probs=95.8
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHh------cCCCCCcceEEEEeCCCCCCchHHHHHHhhcccc--ceeecc-cCCC
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVIN------RSPRTLLKEIILVDDASERVVCPIIDVISDQTFE--YITASD-MTWG 80 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~------qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~--~i~~~~-~~~~ 80 (304)
+|.+++|||.--.+ .+..|-..++. --.+....+||++|+.+.-. ..|..+-....+ |+..-. ++-.
T Consensus 1 m~~~~~iiPv~~S~--e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d--~~i~~~i~~~~~~~yl~~~s~~~F~ 76 (346)
T COG4092 1 MQPNGEIIPVAESE--ELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMD--RLIRSYIDPMPRVLYLDFGSPEPFA 76 (346)
T ss_pred CCCcceEeecchhh--ccchhHHHHHhhHhhhhhccccccEEEEEEecchhHH--HHHHHHhccccceEEEecCCCcccc
Confidence 57899999996543 33333332322 11233456999999976432 233333333322 222111 1111
Q ss_pred cHHHHHhccccccC----CcEEEEecCCcccccccc-----------ccee----eeeceeeeeCCCceeeeccCCceec
Q psy736 81 GFNWKLREKNRHKK----TVVCPIIDVISDQTFEYI-----------TAKT----VVCPIIDVISDQTFEYITASDMTWG 141 (304)
Q Consensus 81 G~~~a~n~g~~~A~----gd~l~flD~D~~~~~~~l-----------~~~~----~~~~~i~~i~~~~~~~~~~~~~~~~ 141 (304)
.-++..|.|+..|- .++++|||.||....|.. -+.. .+-|... ++... +. ....
T Consensus 77 s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~a~~vlPV~~-LNk~~-----~~-v~f~ 149 (346)
T COG4092 77 SETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNIDAPLVLPVYH-LNKAD-----TQ-VFFD 149 (346)
T ss_pred chhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccCcceeeeeee-cchhh-----hh-HHHH
Confidence 11567888987776 999999999999885322 0011 1112110 00000 00 0000
Q ss_pred ccc--cCCCcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHc
Q psy736 142 GFN--WKLNFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQC 214 (304)
Q Consensus 142 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~ 214 (304)
-++ |...... .+ +.. .....-+-.+.. .+.+++.|..|-..||+||+|..+|+||.|+..|+...
T Consensus 150 ~~d~f~d~~i~e--s~---~~~--~~~~~~ff~~~~-T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~ 216 (346)
T COG4092 150 VEDMFLDAMIFE--SP---LAE--FRKEDNFFIAPY-TNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY 216 (346)
T ss_pred HHHHhhhhHhhh--hH---HHH--hCcccccccccc-cceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH
Confidence 000 0000000 00 000 011111222222 45678999999999999999999999999999998654
No 71
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=98.55 E-value=6.4e-06 Score=78.87 Aligned_cols=205 Identities=14% Similarity=0.086 Sum_probs=118.8
Q ss_pred CCCCCCCeEEEEEeeCC-ChHHHHHHHHHHHhcC-CCCCcceEEEEeCCC-CCCc-----hHHHHHHhhccc-cceeecc
Q psy736 6 YPTFLPTTSIVIVFHNE-AWSTLLRTVWSVINRS-PRTLLKEIILVDDAS-ERVV-----CPIIDVISDQTF-EYITASD 76 (304)
Q Consensus 6 y~~~~p~vSIIIp~yN~-~~~~L~~~l~Sll~qt-~~~~~~EIIVVDdgS-~d~t-----~~ii~~~~~~~~-~~i~~~~ 76 (304)
|......|-||||..++ . +.+.+-++...+-. .++...-++||-.++ .|.. .++++.+..+.. ..+..+.
T Consensus 242 ~~~~~~~V~iIvPl~~r~~-~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~ 320 (499)
T PF05679_consen 242 YVTESTRVHIIVPLSGREA-DWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWIS 320 (499)
T ss_pred cccCCCEEEEEEEecCccH-HHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEE
Confidence 44445789999999999 6 88888887754421 112233666666654 3321 234555544321 1222222
Q ss_pred c--CCCcHHHHHhccccccC-CcEEEEecCCcccccccccce--------eeeeceeee-eCCCceeeeccCCceecccc
Q psy736 77 M--TWGGFNWKLREKNRHKK-TVVCPIIDVISDQTFEYITAK--------TVVCPIIDV-ISDQTFEYITASDMTWGGFN 144 (304)
Q Consensus 77 ~--~~~G~~~a~n~g~~~A~-gd~l~flD~D~~~~~~~l~~~--------~~~~~~i~~-i~~~~~~~~~~~~~~~~~~~ 144 (304)
. .....++++..|+.... .++++|+|.|..++++.|++. .+-.|.++. .++.. .+.+ .+.....+.
T Consensus 321 ~~~~~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR~nti~g~qvy~PI~Fs~y~p~~-~~~~-~~~~~~~~~ 398 (499)
T PF05679_consen 321 VKTGEFSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCRMNTIPGKQVYFPIVFSQYNPDI-VYAG-KPPEPDQFD 398 (499)
T ss_pred ecCCCccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHHHhhhcCcEEEEeeeccccCCcc-cccC-CCCccccCc
Confidence 2 12344678899987544 566677799999999877211 122232211 11110 0000 000000000
Q ss_pred cCCCcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHh--CCCCCCCcccccccHHHHHHHHHcC--CeEEE
Q psy736 145 WKLNFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYEL--GSYDEGMDIWGGENLEMSFRVWQCG--GILEI 220 (304)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~i--GGFDe~~~~~g~ED~dl~~R~~~~G--~~i~~ 220 (304)
+ .....-++.. .=+.+.+-++.|.++ ||||+....||+||+||.-++.+.| ..|.=
T Consensus 399 ---------i---------~~~~G~w~~~--gfg~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~R 458 (499)
T PF05679_consen 399 ---------I---------SKDTGFWRRF--GFGMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFR 458 (499)
T ss_pred ---------c---------CCCCCccccC--CCceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEE
Confidence 0 0000001111 114567899999999 9999999999999999999999999 78888
Q ss_pred EeccEEEeeccCC
Q psy736 221 IPCSHVGHVFRDK 233 (304)
Q Consensus 221 ~p~~~v~H~~r~~ 233 (304)
.|+--+.|.++..
T Consensus 459 a~ep~L~h~yh~~ 471 (499)
T PF05679_consen 459 AVEPGLVHRYHPK 471 (499)
T ss_pred ccCCCeEEEeccc
Confidence 8888888888753
No 72
>KOG2547|consensus
Probab=98.43 E-value=4.6e-07 Score=80.58 Aligned_cols=200 Identities=17% Similarity=0.093 Sum_probs=119.5
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceee--cccCCCcHHHH
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITA--SDMTWGGFNWK 85 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~--~~~~~~G~~~a 85 (304)
.++|.||||.|-..-. +.+..-++|.....|+ .+|++.+=+.++|+..++++.+-.+.+..-.. ......|..--
T Consensus 82 ~~LPgVSiikPl~G~d-~nl~~Nlesffts~Y~--~~ElLfcv~s~eDpAi~vv~~Ll~kyp~VdAklf~gG~~vg~npK 158 (431)
T KOG2547|consen 82 PKLPGVSIIKPLKGVD-PNLYHNLESFFTSQYH--KYELLFCVESSEDPAIEVVERLLKKYPNVDAKLFFGGEKVGLNPK 158 (431)
T ss_pred CCCCCceEEeecccCC-chhHHhHHHHHhhccC--ceEEEEEEccCCCcHHHHHHHHHhhCCCcceEEEEcccccccChh
Confidence 4899999999999999 9999999999988887 45999999999999988888887654432111 11112233333
Q ss_pred Hhc---cccccCCcEEEEecCCccccccccc--ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccC-Chhhh
Q psy736 86 LRE---KNRHKKTVVCPIIDVISDQTFEYIT--AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRV-PPREM 159 (304)
Q Consensus 86 ~n~---g~~~A~gd~l~flD~D~~~~~~~l~--~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 159 (304)
+|+ |.+.|+-|++++.|+|..+.|+.+. ...+..+.- -.+...+.+-..++|++..+...+..- +.+..
T Consensus 159 InN~mpgy~~a~ydlvlisDsgI~m~pdtildm~t~M~shek-----malvtq~py~~dr~Gf~atle~~~fgTsh~r~y 233 (431)
T KOG2547|consen 159 INNMMPGYRAAKYDLVLISDSGIFMKPDTILDMATTMMSHEK-----MALVTQTPYCKDRQGFDATLEQVYFGTSHPRIY 233 (431)
T ss_pred hhccCHHHHHhcCCEEEEecCCeeecCchHHHHHHhhhcccc-----eeeecCCceeeccccchhhhhheeeccCCceEE
Confidence 333 4788999999999999999986650 001111100 000000011112344443322211110 00000
Q ss_pred hhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEE
Q psy736 160 MRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEII 221 (304)
Q Consensus 160 ~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~ 221 (304)
.. ++ .. .....+|-.-++||++|++.||+-. |..|-.||+-+..-+...|++-.+.
T Consensus 234 l~--~n-~~--~~~c~tgms~~mrK~~ld~~ggi~~-f~~yLaedyFaaksllSRG~ksais 289 (431)
T KOG2547|consen 234 LS--GN-VL--GFNCSTGMSSMMRKEALDECGGISA-FGGYLAEDYFAAKSLLSRGWKSAIS 289 (431)
T ss_pred Ec--cc-cc--cccccccHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 00 00 00 1112233334589999999999843 4445579999999999999985443
No 73
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=98.00 E-value=1.9e-05 Score=58.35 Aligned_cols=79 Identities=16% Similarity=0.003 Sum_probs=50.5
Q ss_pred eCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCC-cH-HHHHhccc-cccCCc
Q psy736 20 HNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWG-GF-NWKLREKN-RHKKTV 96 (304)
Q Consensus 20 yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~-G~-~~a~n~g~-~~A~gd 96 (304)
+|++ ..|...|..-++.-. -.++|+||||+|+|.++++.+... ..+........ .. ...++.-. ....++
T Consensus 1 rne~-~~L~~wl~~~~~lG~----d~i~i~d~~s~D~t~~~l~~~~~v--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~d 73 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGV----DHIYIYDDGSTDGTREILRALPGV--GIIRWVDPYRDERRQRAWRNALIERAFDAD 73 (97)
T ss_pred CChH-HHHHHHHHHHHHcCC----CEEEEEECCCCccHHHHHHhCCCc--EEEEeCCCccchHHHHHHHHHHHHhCCCCC
Confidence 5888 899999988765422 289999999999999988877442 22222111111 11 11222222 335889
Q ss_pred EEEEecCCc
Q psy736 97 VCPIIDVIS 105 (304)
Q Consensus 97 ~l~flD~D~ 105 (304)
|++++|+|=
T Consensus 74 Wvl~~D~DE 82 (97)
T PF13704_consen 74 WVLFLDADE 82 (97)
T ss_pred EEEEEeeeE
Confidence 999999984
No 74
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=97.71 E-value=0.0017 Score=59.06 Aligned_cols=217 Identities=15% Similarity=0.106 Sum_probs=114.6
Q ss_pred eEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHH------------------HHHHhhc-------
Q psy736 13 TSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPI------------------IDVISDQ------- 67 (304)
Q Consensus 13 vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~i------------------i~~~~~~------- 67 (304)
|=|-|.+|-.. ....||.+++++...+...-|=||+....++..-+ .......
T Consensus 2 IFvsiasyRD~--~c~~Tl~~~~~~A~~P~r~~~gv~~Q~~~~~~~c~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 79 (343)
T PF11397_consen 2 IFVSIASYRDP--ECAPTLKDLFARATNPERLFVGVVWQHYEEDPPCLSEGAPMDPGVHAAREEECVYCFLASSACAEWP 79 (343)
T ss_pred EEEEEeeecCc--hHHHHHHHHHHhcCCCceEEEEEEEEecCCCCcccccccccccccccccccchhhhhhhcccccccc
Confidence 55788999887 58999999998754433446666765333221100 0000000
Q ss_pred ------cccceee---cccCCCcHHHHHhccccccCC-cEEEEecCCccccccc---c--------cceeeeeceeeeeC
Q psy736 68 ------TFEYITA---SDMTWGGFNWKLREKNRHKKT-VVCPIIDVISDQTFEY---I--------TAKTVVCPIIDVIS 126 (304)
Q Consensus 68 ------~~~~i~~---~~~~~~G~~~a~n~g~~~A~g-d~l~flD~D~~~~~~~---l--------~~~~~~~~~i~~i~ 126 (304)
....++. ....-.|-..||+.+.+.=+| +|.+-+|+++.+.+.| | +...+++.......
T Consensus 80 ~~~~~~~~~~Ir~~~~~~~~a~Gp~~AR~la~~l~~gE~y~LqiDSH~rF~~~WD~~li~~~~~~~~~~aVLS~YP~~~~ 159 (343)
T PF11397_consen 80 DGALCLRSDQIRVIRVDASEARGPCWARYLAQKLYRGEDYYLQIDSHMRFVPGWDEILIEMLKSLRNPKAVLSTYPPGYE 159 (343)
T ss_pred cccccccCCeEEEEEeCHHHCcChHHHHHHHHHHhCCCeEEEEEeccceeeccHHHHHHHHHHhcCCCCeEEecCCCCcc
Confidence 0011221 122245888899988777665 7999999999999833 1 11122221110111
Q ss_pred C--CceeeeccCCc--eecccccCCCcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCc-ccc
Q psy736 127 D--QTFEYITASDM--TWGGFNWKLNFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMD-IWG 201 (304)
Q Consensus 127 ~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~-~~g 201 (304)
. ........... ....+.-. ............ ......|...+..++++++-+-.+..++ .||+.+. ++-
T Consensus 160 ~~~~~~~~~~~~~~~lc~~~~~~~---g~~~~~~~~~~~-~~~~~~P~~~~f~aaGF~Fa~~~~~~eV-P~DP~lp~lF~ 234 (343)
T PF11397_consen 160 PDGGQPEPEKTTVPRLCAARFGPD---GMVRLGARWIKP-APKLEEPVPQPFWAAGFSFAPGHFVREV-PYDPHLPFLFD 234 (343)
T ss_pred cccCCccccCCcccEEEEeEECCC---CcEeecceeccc-ccccCCCeeeceecccEEEcchhheecC-CCCCCcccccc
Confidence 1 00000000000 00011000 000000000000 0112345556666666665566666666 8999772 234
Q ss_pred cccHHHHHHHHHcCCeEEEEeccEEEeeccC-CCCc
Q psy736 202 GENLEMSFRVWQCGGILEIIPCSHVGHVFRD-KSPY 236 (304)
Q Consensus 202 ~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~-~~~~ 236 (304)
||++-++.|+|-+||-+..-+...++|.|.+ ..|.
T Consensus 235 GEE~~~aaRlwT~GYD~Y~P~~~v~~H~Y~r~~~p~ 270 (343)
T PF11397_consen 235 GEEISMAARLWTHGYDFYSPTRNVLFHLYSRSKRPK 270 (343)
T ss_pred cHHHHHHHHHHHcCCccccCCCceeEEEccCCCCCC
Confidence 7999999999999999877778889999874 4443
No 75
>KOG3917|consensus
Probab=97.67 E-value=0.00021 Score=59.60 Aligned_cols=147 Identities=14% Similarity=0.167 Sum_probs=90.9
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHH---HhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSV---INRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWK 85 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sl---l~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a 85 (304)
++.++.|++|.+++- +.|...+--. +... +....|.|.+. .|.. + .+ .+..
T Consensus 72 S~HklavlVPfRdRf-EELl~FvPHM~~FL~rq--~v~HHI~vlNQ--vD~f------------R----FN-----RAsL 125 (310)
T KOG3917|consen 72 SYHKLAVLVPFRDRF-EELLEFVPHMSKFLHRQ--NVSHHILVLNQ--VDPF------------R----FN-----RASL 125 (310)
T ss_pred cceeEEEEechHHHH-HHHHHhhHHHHHHHhhc--CcceEEEEeec--cCcc------------e----ec-----hhhh
Confidence 345789999999986 8887765443 3322 23446665543 3431 1 11 1555
Q ss_pred HhccccccC--CcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcC
Q psy736 86 LREKNRHKK--TVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRG 163 (304)
Q Consensus 86 ~n~g~~~A~--gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
+|.|...|. .||+++-|.|..+..+.|. .. ++...|.+.. ..|
T Consensus 126 INVGf~eas~~~DYiaMhDVDLLPlN~el~----------------Y~----fP~~~gp~Hi-------asP-------- 170 (310)
T KOG3917|consen 126 INVGFNEASRLCDYIAMHDVDLLPLNPELP----------------YD----FPGIGGPRHI-------ASP-------- 170 (310)
T ss_pred eecchhhhcchhceeeecccccccCCCCCC----------------CC----CCccCCcccc-------cCc--------
Confidence 666755543 6999999998765433220 00 0000010000 000
Q ss_pred CCCCCc-cccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeE
Q psy736 164 GDRSSP-LRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGIL 218 (304)
Q Consensus 164 ~~~~~~-~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i 218 (304)
..+| +....+.|+.++++++-|++.+|+...|-.||-||-||-.|+.-+|..+
T Consensus 171 --~lHPkYHY~~fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLql 224 (310)
T KOG3917|consen 171 --QLHPKYHYEKFVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQL 224 (310)
T ss_pred --ccCchhhhhhhcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceE
Confidence 0011 1234556899999999999999999999999999999999999999764
No 76
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=97.66 E-value=0.0002 Score=63.97 Aligned_cols=93 Identities=17% Similarity=0.128 Sum_probs=53.5
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCC---CCch---HHHHHHhhccccceeecccCCCcHHH
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASE---RVVC---PIIDVISDQTFEYITASDMTWGGFNW 84 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~---d~t~---~ii~~~~~~~~~~i~~~~~~~~G~~~ 84 (304)
-+..||||+.||. ...|+.++..-+. .+=||||-|.+. |... ++++.+...+.+.+-.+.++++|++.
T Consensus 50 ~~maIVVP~KnE~----l~lleGVL~gIPh--~C~IIvVSNS~r~~~d~f~~E~d~l~~f~~~t~r~~~~vHQkDp~lA~ 123 (381)
T PF09488_consen 50 SKMAIVVPCKNEK----LKLLEGVLSGIPH--DCLIIVVSNSSREPVDRFKMEVDLLKHFCRLTRRQIIIVHQKDPGLAE 123 (381)
T ss_dssp TTEEEEEEESS------HHHHHHHHHCS-T--TSEEEEEE---CSSSCHHHHHHHHHHHHHHHCT--EEEEETT-HHHHH
T ss_pred hCcEEEEECCCCc----hhhhhhhhhcCCC--CCeEEEEECCCCCCccHHHHHHHHHHHHHHhhcCceEEEecCCHHHHH
Confidence 3589999999999 4556666666554 348999999888 4432 34444444344444455666677776
Q ss_pred HHhcc--------------------------ccccCCcEEEEecCCccccc
Q psy736 85 KLREK--------------------------NRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 85 a~n~g--------------------------~~~A~gd~l~flD~D~~~~~ 109 (304)
|...+ ++...-+|+-|+|+|-.++-
T Consensus 124 Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiPG 174 (381)
T PF09488_consen 124 AFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIPG 174 (381)
T ss_dssp HHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-HH
T ss_pred HHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCcc
Confidence 66554 55667799999999987764
No 77
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=97.63 E-value=0.00011 Score=68.29 Aligned_cols=197 Identities=20% Similarity=0.225 Sum_probs=93.9
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeeccc------C-C--
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDM------T-W-- 79 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~------~-~-- 79 (304)
..|.+-|+|.++|++ +++.+||++|++..+....+-|||-.||+...|.++++.+... ..+++.... + .
T Consensus 91 ~~~~~pVlV~AcNRp-~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~y~~~-v~~i~~~~~~~i~~~~~~~~ 168 (434)
T PF03071_consen 91 KEPVIPVLVFACNRP-DYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKSYGDQ-VTYIQHPDFSPITIPPKEKK 168 (434)
T ss_dssp ------EEEEESS-T-T-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHGGGGG-SEEEE-S--S-----TT-GG
T ss_pred CCCcceEEEEecCCc-HHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHHhhhh-heeeecCCcCCceeCccccc
Confidence 346688999999999 9999999999987554344679999999988888877766432 223322110 0 0
Q ss_pred -Cc---H----HHHHhccccccCCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCccc
Q psy736 80 -GG---F----NWKLREKNRHKKTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRW 151 (304)
Q Consensus 80 -~G---~----~~a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (304)
.| . .+|++.-...-.-+.++++.+|.++.|+.+..-....+.+. -++ ++.... .|.-..+.
T Consensus 169 ~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~-~D~-sl~ciS---------awNdnG~~ 237 (434)
T PF03071_consen 169 FKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLE-NDP-SLWCIS---------AWNDNGKE 237 (434)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHH-H-T-TEEEEE---------S--TT-BG
T ss_pred ccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHh-cCC-CeEEEE---------ccccCCcc
Confidence 01 1 12333334333567899999999999976611011111110 011 111111 11110000
Q ss_pred ccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHH-HHcCCeEEEEecc-EEEee
Q psy736 152 YRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRV-WQCGGILEIIPCS-HVGHV 229 (304)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~-~~~G~~i~~~p~~-~v~H~ 229 (304)
..... ..+...+++..+.|-..|++|++|+++.. .|.-.-+|-.+|. .+..+|-...|++ +..|.
T Consensus 238 ~~~~~-------~~~~~lyRsdffpglGWml~r~~w~el~~------~Wp~~~WDdwmR~~~~rkgR~cIrPeisRt~~f 304 (434)
T PF03071_consen 238 HFVDD-------SRPSLLYRSDFFPGLGWMLTRELWDELEP------KWPKAFWDDWMRQPEQRKGRQCIRPEISRTYHF 304 (434)
T ss_dssp GGS-T-------T-TT-EEEESS---SSEEEEHHHHHHHGG------G--SS-HHHHHTSHHHHTT-EEEEESSBSEEE-
T ss_pred ccccC-------CCccceEecccCCchHHHhhHHHHHhhcc------cCCCCCchhhhcCccccCCCceeeccCCCcccc
Confidence 00100 12334456777777778999999999763 1323347788884 3444566666876 47776
Q ss_pred cc
Q psy736 230 FR 231 (304)
Q Consensus 230 ~r 231 (304)
.+
T Consensus 305 g~ 306 (434)
T PF03071_consen 305 GK 306 (434)
T ss_dssp -S
T ss_pred Cc
Confidence 54
No 78
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=97.56 E-value=0.00078 Score=64.38 Aligned_cols=41 Identities=17% Similarity=0.044 Sum_probs=32.2
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCC
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDA 52 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdg 52 (304)
.+=..||+|||..+.|.++|+|+..++|++...=|+||=||
T Consensus 26 ~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG 66 (527)
T PF03142_consen 26 FVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDG 66 (527)
T ss_pred eEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCc
Confidence 34458999999889999999999998888665456666554
No 79
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=97.52 E-value=0.00059 Score=60.68 Aligned_cols=93 Identities=18% Similarity=0.142 Sum_probs=62.5
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCC---c---hHHHHHHhhccccceeecccCCCcHHH
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERV---V---CPIIDVISDQTFEYITASDMTWGGFNW 84 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~---t---~~ii~~~~~~~~~~i~~~~~~~~G~~~ 84 (304)
-+..||||+.||. ...|+.++..-+. .+-||||-|.+..+ . .++++.+...+.+.+-.+.++++|++.
T Consensus 50 ~~maIVVP~KdE~----l~lleGVL~gIPh--~c~iIvVSNS~r~~~d~f~~E~d~~~~f~~~t~r~~i~vHQkDp~la~ 123 (381)
T TIGR02460 50 GKTAIVVPVKNEK----LHLLEGVLSGIPH--ECPIIIVSNSKREPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALAE 123 (381)
T ss_pred hCcEEEEEcCCCc----hhHHhhHhhcCCC--CCeEEEEeCCCCCChhHHHHHHHHHHHHHHhhcCceEEEEcCCHHHHH
Confidence 3578999999999 4556666666554 34899999977633 2 133333333333444455666778777
Q ss_pred HHhcc--------------------------ccccCCcEEEEecCCccccc
Q psy736 85 KLREK--------------------------NRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 85 a~n~g--------------------------~~~A~gd~l~flD~D~~~~~ 109 (304)
|.+.+ ++....+|+-|+|+|..++-
T Consensus 124 Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiPG 174 (381)
T TIGR02460 124 AFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFPG 174 (381)
T ss_pred HHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCCCc
Confidence 77655 55566799999999998875
No 80
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=97.52 E-value=0.00059 Score=61.06 Aligned_cols=93 Identities=17% Similarity=0.132 Sum_probs=62.9
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCC---c---hHHHHHHhhccccceeecccCCCcHHH
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERV---V---CPIIDVISDQTFEYITASDMTWGGFNW 84 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~---t---~~ii~~~~~~~~~~i~~~~~~~~G~~~ 84 (304)
-+..||||+.||. ...|+.++..-+. .+-||||-|.+..+ . .++++.+...+.+.+-.+.++++|++.
T Consensus 51 ~~mAIVVP~KdE~----l~lleGVL~gIPh--~c~iIvVSNS~r~~~d~f~~E~dlv~~f~~~t~r~~i~vHQkDp~la~ 124 (393)
T PRK14503 51 GRMAIVVPVKNER----LKLLEGVLKGIPH--ECPIIVVSNSKREPPDRFKLEVDLVRHFYRLTQRPIIIVHQKDPGLAE 124 (393)
T ss_pred hCcEEEEEcCCCc----hhHHhhHhhcCCC--CCeEEEEeCCCCCCchHHHHHHHHHHHHHhhhcCceEEEEcCCHHHHH
Confidence 3578999999999 4556666666554 34899999976633 2 133333333333444455667778888
Q ss_pred HHhcc--------------------------ccccCCcEEEEecCCccccc
Q psy736 85 KLREK--------------------------NRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 85 a~n~g--------------------------~~~A~gd~l~flD~D~~~~~ 109 (304)
|...+ ++....+|+-|+|+|-.++-
T Consensus 125 Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiPG 175 (393)
T PRK14503 125 ALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIPG 175 (393)
T ss_pred HHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCCc
Confidence 77665 55566799999999998775
No 81
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=97.09 E-value=0.0066 Score=53.04 Aligned_cols=101 Identities=13% Similarity=-0.042 Sum_probs=67.9
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCC--CCchHHHHHHhhcc---------ccceeecc
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASE--RVVCPIIDVISDQT---------FEYITASD 76 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~--d~t~~ii~~~~~~~---------~~~i~~~~ 76 (304)
..-+.|=|+.|..|.+ .++.+-.+.|.+.+||.....+=+.-+.|+ |.|.+.++...... +..+..+.
T Consensus 22 ~~~e~VLILtplrna~-~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~ 100 (269)
T PF03452_consen 22 RNKESVLILTPLRNAA-SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILR 100 (269)
T ss_pred ccCCeEEEEEecCCch-HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEc
Confidence 3457899999999999 999999999999999877777744444455 77776666432221 11122211
Q ss_pred cC---------------------CCcHHHHHhcccccc---CCcEEEEecCCccccc
Q psy736 77 MT---------------------WGGFNWKLREKNRHK---KTVVCPIIDVISDQTF 109 (304)
Q Consensus 77 ~~---------------------~~G~~~a~n~g~~~A---~gd~l~flD~D~~~~~ 109 (304)
.. +.-.+++||.-+..| ..+|++++|+|.+-.|
T Consensus 101 ~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P 157 (269)
T PF03452_consen 101 KDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETP 157 (269)
T ss_pred CCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCC
Confidence 10 122466777765544 5599999999999777
No 82
>PLN02893 Cellulose synthase-like protein
Probab=97.02 E-value=0.0065 Score=60.05 Aligned_cols=32 Identities=9% Similarity=-0.187 Sum_probs=25.6
Q ss_pred cHHHHHhcccc----ccCCcEEEEecCCcccc-cccc
Q psy736 81 GFNWKLREKNR----HKKTVVCPIIDVISDQT-FEYI 112 (304)
Q Consensus 81 G~~~a~n~g~~----~A~gd~l~flD~D~~~~-~~~l 112 (304)
-++.++|.+++ .++|++|+.+|+|..++ |+.+
T Consensus 281 ~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l 317 (734)
T PLN02893 281 FKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTP 317 (734)
T ss_pred cccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHH
Confidence 34789999987 48999999999999965 4444
No 83
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.84 E-value=0.0058 Score=59.96 Aligned_cols=93 Identities=13% Similarity=0.094 Sum_probs=62.2
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCC---c---hHHHHHHhhccccceeecccCCCcHHH
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERV---V---CPIIDVISDQTFEYITASDMTWGGFNW 84 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~---t---~~ii~~~~~~~~~~i~~~~~~~~G~~~ 84 (304)
-+..||||+.||. ...|+.++..-+. .+-||||-|.+..+ . .++++.+...+.+.+-.+.++++|++.
T Consensus 55 ~~~aivvp~k~e~----~~~~~gvl~~ip~--~c~ii~vsns~r~~~d~~~~e~~~~~~~~~~~~~~~~~vhq~dp~~a~ 128 (694)
T PRK14502 55 KKMAIVLPIKDED----LKVFEGVLSGIPH--DCLMIVISNSSKQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELAN 128 (694)
T ss_pred hCcEEEEEcCCCc----hhHHhhHhhcCCC--CCeEEEEeCCCCCchHHHHHHHHHHHHHHHhhcCceEEEEcCCHHHHH
Confidence 3578999999999 4556666666554 34899999976532 2 123333333333344445566777777
Q ss_pred HHhcc--------------------------ccccCCcEEEEecCCccccc
Q psy736 85 KLREK--------------------------NRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 85 a~n~g--------------------------~~~A~gd~l~flD~D~~~~~ 109 (304)
|...+ ++...-+|+-|+|+|-.++-
T Consensus 129 a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~pg 179 (694)
T PRK14502 129 AIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIPG 179 (694)
T ss_pred HHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCCc
Confidence 77655 55566799999999998875
No 84
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=96.46 E-value=0.041 Score=49.75 Aligned_cols=45 Identities=16% Similarity=0.293 Sum_probs=39.6
Q ss_pred HhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccCC
Q psy736 189 ELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRDK 233 (304)
Q Consensus 189 ~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~~ 233 (304)
..=.|||.|..||..-+-...-+..+||+....|.+.+.|.....
T Consensus 242 ~~P~yDErF~~yg~nk~s~~~eL~~~gy~F~VL~~aFlVH~~h~~ 286 (317)
T PF13896_consen 242 NVPLYDERFRGYGFNKISQIYELCAAGYRFHVLPNAFLVHRPHKP 286 (317)
T ss_pred CCCCCcccccccccchHHHHHHHHHcCCEEEEcCCeeEEecCCCC
Confidence 455799999999998889999999999999999999999986543
No 85
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=95.54 E-value=0.23 Score=42.91 Aligned_cols=193 Identities=12% Similarity=0.063 Sum_probs=94.6
Q ss_pred EEEEeeCCChHHHHHHHH-HHHh---cCCCCCcceEEEEeCCCCCCchHHHHHHhhccc-----cceeeccc--------
Q psy736 15 IVIVFHNEAWSTLLRTVW-SVIN---RSPRTLLKEIILVDDASERVVCPIIDVISDQTF-----EYITASDM-------- 77 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~-Sll~---qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~-----~~i~~~~~-------- 77 (304)
|-.-.||.+ +.|..... ++++ .-.+ ...=|-|+++||+|+|.++++.++.... ..+.....
T Consensus 4 IA~~l~~~~-~iL~~~~~~~ll~li~~LGp-~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~~ 81 (241)
T PF11735_consen 4 IAANLYNNE-DILPSLWGDALLELIRFLGP-ENVFVSIYESGSWDGTKEALRALDAELDALGVPHSIVLSDITHRDEIER 81 (241)
T ss_pred EEEEcccCH-hHHHHHHHHHHHHHHHHhCc-CeEEEEEEeCCCCccHHHHHHHHHHHHHhCCCCeEEEeCCCcccccccc
Confidence 334457776 66665544 5543 3333 2347889999999999999998874322 12222111
Q ss_pred ----CCC-cHHHHHhcccc---------ccCCcEEEEecCCccccc-ccc------c--ceeeeeceeeeeCCCceeeec
Q psy736 78 ----TWG-GFNWKLREKNR---------HKKTVVCPIIDVISDQTF-EYI------T--AKTVVCPIIDVISDQTFEYIT 134 (304)
Q Consensus 78 ----~~~-G~~~a~n~g~~---------~A~gd~l~flD~D~~~~~-~~l------~--~~~~~~~~i~~i~~~~~~~~~ 134 (304)
.+. =++..||.+++ ..+-+.|+||| |+...+ +.| + ...++|+ ++......|...-
T Consensus 82 ~~~~~RI~~LA~lRN~ALePL~~~~~~~~~~fd~VlfLN-DV~f~~~Dil~LL~~~~~~~~~~aCa-mDf~~~~~fYD~w 159 (241)
T PF11735_consen 82 PPRLRRIEYLAELRNRALEPLYDLARKRGRRFDKVLFLN-DVFFCPEDILELLFTRNRGNYDMACA-MDFINPPKFYDTW 159 (241)
T ss_pred cchhhhHHHHHHHHhHHHHHHHhhhhccCCCcCEEEEec-CcccCHHHHHHHHhhcCcccccchhh-cccccCcccccee
Confidence 011 12577888832 22346799998 777776 222 1 1223333 2222222221100
Q ss_pred -cCCceecccccCCCcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhC--CCCC--CCcccccccHHHHH
Q psy736 135 -ASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELG--SYDE--GMDIWGGENLEMSF 209 (304)
Q Consensus 135 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iG--GFDe--~~~~~g~ED~dl~~ 209 (304)
..+. .|. ......++.......+.......|+++....+|..++..+.|..-+ -|-- ...--++|-.=++.
T Consensus 160 v~RD~--~G~--~~~~~~~p~f~~~~~~~~~~~~~pv~V~SCWnG~va~~a~pf~~~~~lrFR~~~~~~~~~sEc~Li~~ 235 (241)
T PF11735_consen 160 VLRDI--EGD--SFGSPFWPYFRSASSRDRLRRGDPVPVFSCWNGMVAFDAEPFLPPTPLRFRADSEGECEASECCLIHA 235 (241)
T ss_pred EEecC--CCC--ccccccCcCcCCHHHHHHHhcCCCeeeecccCCcccccchhhccCCceeecCCCCCceeccchhHhHh
Confidence 0000 011 1111111110011111112346677777788899999999998766 3322 11112345555555
Q ss_pred HHHHcC
Q psy736 210 RVWQCG 215 (304)
Q Consensus 210 R~~~~G 215 (304)
-+|+.|
T Consensus 236 D~~~~g 241 (241)
T PF11735_consen 236 DLWRWG 241 (241)
T ss_pred hhhhcC
Confidence 555544
No 86
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=95.33 E-value=0.069 Score=47.38 Aligned_cols=95 Identities=15% Similarity=-0.004 Sum_probs=72.1
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecc-----cC-----CCc
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASD-----MT-----WGG 81 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~-----~~-----~~G 81 (304)
..|-.|-+.||+ .+|+.||+|++..- .|.||.=|.|+|+|.+++.++.++.+.++...- .. ..-
T Consensus 88 ~~~~~iRvKnE~-~tl~~si~S~Lpai-----~~gVI~yNdc~D~t~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n~ 161 (347)
T PF06306_consen 88 NPWAFIRVKNEA-MTLAESIESILPAI-----DEGVIGYNDCTDGTEEIILEFCKKYPSFIPIKYPYEVIIKNPKSEENS 161 (347)
T ss_pred CcceEEEEcchh-hhHHHHHHHHHHHH-----hccEEEeecCCCCHHHHHHHHHHhCcccccccCcchhhccCCchhhhh
Confidence 478899999999 99999999998652 388888888999999999999888776654321 00 112
Q ss_pred HHHHHhccccc-cCCcEEEEecCCcccccccc
Q psy736 82 FNWKLREKNRH-KKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 82 ~~~a~n~g~~~-A~gd~l~flD~D~~~~~~~l 112 (304)
+..--|..+.. .+.+|++=+|+|-+..++.|
T Consensus 162 l~~YYNy~ls~ipk~~w~iKID~DhIy~~~KL 193 (347)
T PF06306_consen 162 LYNYYNYVLSFIPKNEWAIKIDADHIYDTKKL 193 (347)
T ss_pred hhhhhhhhhcccccceEEEEeccceeecHHHH
Confidence 33344555555 57899999999999888665
No 87
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=95.00 E-value=0.053 Score=42.21 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=43.8
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHH---HhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSV---INRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sl---l~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
-++.||||.+|++ +.|...|..+ |+... ..+.|+||+...+.. ++.-. ..|.||..|++
T Consensus 47 ~kvAiIIPyRdR~-~hL~~fl~~l~~~L~rQ~--~~y~I~vieQ~~~~~------------FNRg~---L~NvGf~eA~~ 108 (136)
T PF13733_consen 47 HKVAIIIPYRDRE-EHLRIFLPHLHPFLQRQQ--LDYRIFVIEQVDNGP------------FNRGK---LMNVGFLEALK 108 (136)
T ss_dssp -EEEEEEEESS-H-HHHHHHHHHHHHHHHHTT---EEEEEEEEE-SSS---------------HHH---HHHHHHHHHHH
T ss_pred cceEEEEEeCCHH-HHHHHHHHHHHHHHhhCc--ceEEEEEEeeccCCC------------Cchhh---hhhHHHHHHhh
Confidence 3799999999998 8888877654 54432 467999999853222 11000 01334444443
Q ss_pred ccccccCCcEEEEecCCccccc
Q psy736 88 EKNRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 88 ~g~~~A~gd~l~flD~D~~~~~ 109 (304)
. -.-|.++|-|.|..+..
T Consensus 109 ~----~~~dc~ifHDVDllP~~ 126 (136)
T PF13733_consen 109 D----DDFDCFIFHDVDLLPEN 126 (136)
T ss_dssp H----S--SEEEEE-TTEEESB
T ss_pred c----cCCCEEEEecccccccC
Confidence 2 23578999999987654
No 88
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.52 E-value=0.49 Score=45.06 Aligned_cols=50 Identities=18% Similarity=0.079 Sum_probs=32.0
Q ss_pred ccceeeeEehHHHhHhCCCCC--CCcccccc----cHHHHHHHHHcCCeEEEEecc
Q psy736 175 MAGGLFAIDKDYFYELGSYDE--GMDIWGGE----NLEMSFRVWQCGGILEIIPCS 224 (304)
Q Consensus 175 ~~G~~~~irr~~f~~iGGFDe--~~~~~g~E----D~dl~~R~~~~G~~i~~~p~~ 224 (304)
..|.|-.||.+.|-+.-|... +=...||| |.==+.=++++||.+...|+-
T Consensus 316 yWGHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~dL 371 (736)
T COG2943 316 YWGHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYDL 371 (736)
T ss_pred cccccceeechhhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhcCceEEEeccC
Confidence 468888999999988877754 11122332 222233367899998887754
No 89
>KOG2571|consensus
Probab=93.37 E-value=0.16 Score=51.24 Aligned_cols=27 Identities=19% Similarity=0.164 Sum_probs=24.3
Q ss_pred cccHHHHHHHHHcCCeEEEEeccEEEe
Q psy736 202 GENLEMSFRVWQCGGILEIIPCSHVGH 228 (304)
Q Consensus 202 ~ED~dl~~R~~~~G~~i~~~p~~~v~H 228 (304)
+||--||.++.+.||++.|++.+...-
T Consensus 551 geDR~L~~~llskgy~l~Y~a~s~a~t 577 (862)
T KOG2571|consen 551 GEDRWLCTLLLSKGYRLKYVAASDAET 577 (862)
T ss_pred chhHHHHHHHHhccceeeeeccccccc
Confidence 799999999999999999999887553
No 90
>KOG1413|consensus
Probab=91.82 E-value=0.43 Score=43.04 Aligned_cols=192 Identities=15% Similarity=0.154 Sum_probs=106.8
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeec----------c--
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITAS----------D-- 76 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~----------~-- 76 (304)
..|-+-||+-+-|++ +.+.+|++.|+.+.+....+=|||--||+...+...+..+..... ++... +
T Consensus 65 ~~~v~pvvVf~csR~-~~lr~~v~kll~yrPsaekfpiiVSQD~~~e~vk~~~~~~g~~v~-~i~~~~h~~~ei~v~~~~ 142 (411)
T KOG1413|consen 65 WPPVIPVVVFACSRA-DALRRHVKKLLEYRPSAEKFPIIVSQDCEKEAVKKKLLSYGSDVS-HIQHPMHLKDEISVPPRH 142 (411)
T ss_pred CCCceeEEEEecCcH-HHHHHHHHHHHHhCcchhhcCEEEeccCCcHHHHHHHHHhccchh-hhcCccccccccccCCcc
Confidence 345678888889998 999999999999876555566888888888777666655543321 11111 0
Q ss_pred cCCCc-------HHHHHhccccccCCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCc
Q psy736 77 MTWGG-------FNWKLREKNRHKKTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNF 149 (304)
Q Consensus 77 ~~~~G-------~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 149 (304)
.+..| ..+|+|.-...-+-+.++.+-+|..+.|+.+..-..... .+ .+.+..|.-..|+-..
T Consensus 143 ~k~~~Yy~IarHYkwAL~q~F~~~~~s~vii~eDDl~iapDFF~YF~~t~~---ll--------k~D~siwcvsaWNDNG 211 (411)
T KOG1413|consen 143 KKFNAYYKIARHYKWALNQLFIVFRESRVIITEDDLNIAPDFFSYFRNTII---LL--------KGDPSIWCVSAWNDNG 211 (411)
T ss_pred cccchhHHHHHHHHHHHhhHHhhcCCceeEEecchhhhhhHHHHHHHHHHH---HH--------hcCCceEEeeeeccCC
Confidence 11222 245667666666777888887787777644400000000 00 0111122221222111
Q ss_pred ccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCC-CCCCCcccccccHHHHHHH-HHcCCeEEEEeccEEE
Q psy736 150 RWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGS-YDEGMDIWGGENLEMSFRV-WQCGGILEIIPCSHVG 227 (304)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGG-FDe~~~~~g~ED~dl~~R~-~~~G~~i~~~p~~~v~ 227 (304)
+...+.. ..+...+++..+.|-..|+.+++++++-. |..+| ++| .+|. -++-.+...-|+....
T Consensus 212 k~~~Id~-------~~~~~lYRtDFFpGLGWml~~~~W~ELsp~wP~~f----WDD---Wmr~pe~rK~R~cIRPEiSRT 277 (411)
T KOG1413|consen 212 KKQTIDS-------TRPSLLYRTDFFPGLGWMLTKKLWEELSPKWPVAF----WDD---WMRIPENRKGRQCIRPEISRT 277 (411)
T ss_pred Ccccccc-------cccchhhhccccccchHHHHHHHHHhhCCCCcccc----hhh---hhhchhhhccccccChHhhhh
Confidence 1111111 11233445666777778899999999863 65554 233 4554 3444566777766544
No 91
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=88.41 E-value=2.6 Score=35.85 Aligned_cols=93 Identities=18% Similarity=0.135 Sum_probs=53.1
Q ss_pred CCeEEEEEeeCCC--hHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccC--------CC
Q psy736 11 PTTSIVIVFHNEA--WSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMT--------WG 80 (304)
Q Consensus 11 p~vSIIIp~yN~~--~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~--------~~ 80 (304)
|.|=||.|||.+. ...|.+.-+.| ..-+ ++ --|||+|+. ..|.++.+-+......|.+..... ..
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL-~lVp-~l--~WIVVEd~~-~~t~~va~lL~~sgl~y~HL~~~~~~~~~~~~~r 75 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTL-RLVP-PL--HWIVVEDSE-EKTPLVAELLRRSGLMYTHLNAKTPSDPTWLKPR 75 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHH-hcCC-ce--EEEEEeCCC-CCCHHHHHHHHHcCCceEEeccCCCCCcccCCcc
Confidence 5677999999986 12334444443 3333 34 899999986 334444444444433443332111 12
Q ss_pred cHHHHHhccccc-------cCCcEEEEecCCccccc
Q psy736 81 GFNWKLREKNRH-------KKTVVCPIIDVISDQTF 109 (304)
Q Consensus 81 G~~~a~n~g~~~-------A~gd~l~flD~D~~~~~ 109 (304)
| ...||.|++. ...-++.|.|+|....-
T Consensus 76 g-~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl 110 (223)
T cd00218 76 G-VEQRNLALRWIREHLSAKLDGVVYFADDDNTYDL 110 (223)
T ss_pred c-HHHHHHHHHHHHhccccCcceEEEEccCCCcccH
Confidence 3 4567777432 34468899999887664
No 92
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=87.58 E-value=1.7 Score=37.81 Aligned_cols=92 Identities=13% Similarity=-0.001 Sum_probs=48.8
Q ss_pred eEEEEEe-eCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccc
Q psy736 13 TSIVIVF-HNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNR 91 (304)
Q Consensus 13 vSIIIp~-yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~ 91 (304)
.+|||.| |++. +.|.+.|.++ ++.+ ...|||||=|+....-. ........ .-++........ ...|-....
T Consensus 1 fTvvi~t~~~R~-~~L~~~l~~l-~~~~--~l~~IvVvWn~~~~~P~-~~~~~~~~--vpV~~~~~~~ns-LnnRF~p~~ 72 (247)
T PF09258_consen 1 FTVVINTSYKRS-DLLKRLLRHL-ASSP--SLRKIVVVWNNPNPPPP-SSKWPSTG--VPVRVVRSSRNS-LNNRFLPDP 72 (247)
T ss_dssp EEEEEEE-SS-H-HHHHHHHHHH-TTST--TEEEEEEEEE-TS--TH-HHHHT-----S-EEEEEESSHH-GGGGGS--T
T ss_pred CEEEEEecccch-HHHHHHHHHH-HcCC--CCCeEEEEeCCCCCCCc-ccccCCCC--ceEEEEecCCcc-HHhcCcCcc
Confidence 4799999 9998 9999999997 3332 35699999887333211 11111111 112222221110 112223356
Q ss_pred ccCCcEEEEecCCcccccccc
Q psy736 92 HKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 92 ~A~gd~l~flD~D~~~~~~~l 112 (304)
.-+.+-++.+|+|..++.+.|
T Consensus 73 ~i~T~AVl~~DDDv~~~~~~l 93 (247)
T PF09258_consen 73 EIETDAVLSLDDDVMLSCDEL 93 (247)
T ss_dssp T--SSEEEEEETTEEE-HHHH
T ss_pred ccCcceEEEecCCcccCHHHH
Confidence 778999999999998887555
No 93
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=87.11 E-value=1.7 Score=37.45 Aligned_cols=80 Identities=8% Similarity=-0.007 Sum_probs=44.9
Q ss_pred HHHHHHhcCCCCCcceEEE-EeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcc---ccccCCcEEE--EecC
Q psy736 30 TVWSVINRSPRTLLKEIIL-VDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREK---NRHKKTVVCP--IIDV 103 (304)
Q Consensus 30 ~l~Sll~qt~~~~~~EIIV-VDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g---~~~A~gd~l~--flD~ 103 (304)
||.||.+||.+++ ..|| +|+.+.+.-.+-++.+.+..+........+.. -..++... .....+++++ -||+
T Consensus 47 ~LpSl~~QTd~dF--~~lv~~~~~~P~~~~~rL~~l~~~~p~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~RLDd 123 (234)
T PF11316_consen 47 CLPSLRAQTDQDF--TWLVLFDDDLPEPYRERLRDLLADYPQFRIVFRPPGP-HRDAMRRAINAARRDGADPVLQFRLDD 123 (234)
T ss_pred HhhHHHhccCCCe--EEEEEECCCCCHHHHHHHHHHhccCCCcEEEecCCch-HHHHHHHHHhhhccCCCCEEEEEEECC
Confidence 8999999998865 6555 77777776666666665555433222211111 12233322 2223444443 3599
Q ss_pred Ccccccccc
Q psy736 104 ISDQTFEYI 112 (304)
Q Consensus 104 D~~~~~~~l 112 (304)
|+.+..+.+
T Consensus 124 DDAl~~dFV 132 (234)
T PF11316_consen 124 DDALHRDFV 132 (234)
T ss_pred cchhhHHHH
Confidence 988887544
No 94
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=87.00 E-value=2.9 Score=37.69 Aligned_cols=28 Identities=11% Similarity=-0.345 Sum_probs=24.4
Q ss_pred HHHHhccccccCCcEEEEecCCcccccc
Q psy736 83 NWKLREKNRHKKTVVCPIIDVISDQTFE 110 (304)
Q Consensus 83 ~~a~n~g~~~A~gd~l~flD~D~~~~~~ 110 (304)
...||.|.-.++-+|++++|+||.+..+
T Consensus 82 ~a~R~fGyL~s~~~yivsiDDD~~Pa~d 109 (346)
T PLN03180 82 SACRCFGYLVSKKKYIFTIDDDCFVAKD 109 (346)
T ss_pred ccchhhhheeecceEEEEECCCCCCCCC
Confidence 4568888888899999999999999885
No 95
>PLN02190 cellulose synthase-like protein
Probab=86.07 E-value=1.4 Score=43.98 Aligned_cols=55 Identities=15% Similarity=0.111 Sum_probs=45.7
Q ss_pred CCCCeEEEEEeeC---CChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 9 FLPTTSIVIVFHN---EAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 9 ~~p~vSIIIp~yN---~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
++|.|-|.|+|+| |+......|+.|+++-+||....-+-|-|||.+.-|..-+.+
T Consensus 91 ~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~E 148 (756)
T PLN02190 91 DLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKE 148 (756)
T ss_pred cCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHH
Confidence 5799999999999 885677789999999999866667899999988877654443
No 96
>PHA01631 hypothetical protein
Probab=85.56 E-value=1.9 Score=34.67 Aligned_cols=20 Identities=15% Similarity=-0.011 Sum_probs=16.1
Q ss_pred ccccCCcEEEEecCCccccc
Q psy736 90 NRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 90 ~~~A~gd~l~flD~D~~~~~ 109 (304)
++.-.-|+++|+|+|..+++
T Consensus 67 ~s~i~DDi~~iIDSDV~ipn 86 (176)
T PHA01631 67 AKNIEDDIIAIIDSDLIIPN 86 (176)
T ss_pred hccCCccEEEEeccceEecC
Confidence 34467899999999998875
No 97
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=85.22 E-value=1 Score=40.34 Aligned_cols=95 Identities=13% Similarity=-0.007 Sum_probs=50.9
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcccc---ceeeccc-CCCcH--HHH
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFE---YITASDM-TWGGF--NWK 85 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~---~i~~~~~-~~~G~--~~a 85 (304)
.+-||||+-..........-+++++ .+.+|||-|+-..+...+-+-+..+..+ ..+.+.. .-..+ ...
T Consensus 9 ~~divi~~~~~~l~~~~~~wr~~~~------~~hliiv~d~~~~~~~~~p~g~~~~~y~~~di~~~lg~~~~i~~~~~a~ 82 (348)
T PF03214_consen 9 EVDIVIPALRPNLTDFLEEWRPFFS------PYHLIIVQDPDPNEEIKVPEGFDYEVYNRNDIERVLGAKTLIPFKGDAC 82 (348)
T ss_pred cccEEeecccccHHHHHHHHHHhhc------ceeEEEEeCCCccccccCCcccceeeecHhhHHhhcCCcccccccccch
Confidence 4789999977431122223333332 2488999887444321111111111000 0000100 00111 456
Q ss_pred HhccccccCCcEEEEecCCcccccccc
Q psy736 86 LREKNRHKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 86 ~n~g~~~A~gd~l~flD~D~~~~~~~l 112 (304)
||.|.-.|+-+|++++|+||.+..++.
T Consensus 83 R~fGyL~s~~~yivsiDDD~~P~~D~~ 109 (348)
T PF03214_consen 83 RNFGYLVSKKDYIVSIDDDCLPAKDDF 109 (348)
T ss_pred hhhHhhhcccceEEEEccccccccCCc
Confidence 888988899999999999999988554
No 98
>PLN02458 transferase, transferring glycosyl groups
Probab=80.29 E-value=11 Score=34.00 Aligned_cols=95 Identities=13% Similarity=0.046 Sum_probs=53.5
Q ss_pred CCCeEEEEEeeC-CC--hHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCC-----Cc
Q psy736 10 LPTTSIVIVFHN-EA--WSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTW-----GG 81 (304)
Q Consensus 10 ~p~vSIIIp~yN-~~--~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~-----~G 81 (304)
.+.|=||.|||. +. ..+|.+.-+.| ...++++ --|||+|++ .|.++.+-+......|.+.....+ ..
T Consensus 111 ~rlIivVTPTY~rR~~Q~a~LTRLahTL-~lVp~pL--~WIVVEd~~--~t~~va~lLrrsGl~y~HL~~k~~~~~~~~r 185 (346)
T PLN02458 111 RRLVIIVTPISTKDRYQGVLLRRLANTL-RLVPPPL--LWIVVEGQS--DSEEVSEMLRKTGIMYRHLVFKENFTDPEAE 185 (346)
T ss_pred CceEEEECCCCCCcchhHHHHHHHHHHH-hcCCCCc--eEEEEeCCC--CCHHHHHHHHHcCCceEEeccCCCCCCccch
Confidence 355889999998 33 12444444443 3344344 889999875 334444444444334443321111 12
Q ss_pred HHHHHhcccccc----CCcEEEEecCCccccc
Q psy736 82 FNWKLREKNRHK----KTVVCPIIDVISDQTF 109 (304)
Q Consensus 82 ~~~a~n~g~~~A----~gd~l~flD~D~~~~~ 109 (304)
....||.|++.- ..-++.|.|+|-...-
T Consensus 186 ~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl 217 (346)
T PLN02458 186 LDHQRNLALRHIEHHKLSGIVHFAGLSNVYDL 217 (346)
T ss_pred hHHHHHHHHHHHHhcCcCceEEEccCCCcccH
Confidence 245688885433 4468889999877653
No 99
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=78.41 E-value=15 Score=30.41 Aligned_cols=47 Identities=13% Similarity=0.127 Sum_probs=34.8
Q ss_pred cccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeE
Q psy736 172 TPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGIL 218 (304)
Q Consensus 172 ~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i 218 (304)
.+.+.|++.++++++.+.+--.-........||+-+++=+...|.+.
T Consensus 145 P~y~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~ 191 (195)
T PF01762_consen 145 PPYCSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKP 191 (195)
T ss_pred CCcCCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCc
Confidence 34667999999999998886544334444579999988888887653
No 100
>KOG1476|consensus
Probab=74.96 E-value=21 Score=32.00 Aligned_cols=92 Identities=22% Similarity=0.209 Sum_probs=49.4
Q ss_pred CCCeEEEEEeeCCChHH---HHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH-Hhhccccceeecc---cCCC--
Q psy736 10 LPTTSIVIVFHNEAWST---LLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV-ISDQTFEYITASD---MTWG-- 80 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~---L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~-~~~~~~~~i~~~~---~~~~-- 80 (304)
.|.|=||.|||++. -. |.+.-.+ |.+-+ ++ --|||+||+ ++.+.+.. ++.....|..... ..+.
T Consensus 86 ~~~iivVTPTY~R~-~q~~~LtRlanT-L~~V~-nL--hWIVVEd~~--~~~p~v~~~L~rtgl~ythl~~~t~~~~~~~ 158 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRP-VQAAELTRLANT-LRLVP-NL--HWIVVEDGE--GTTPEVSGILRRTGLPYTHLVHKTPMGYKAR 158 (330)
T ss_pred CccEEEEcccccch-hHHHHHHHHHHH-HhhcC-Ce--eEEEEecCC--CCCHHHHHHHHHcCCceEEEeccCCCCCccc
Confidence 67899999999987 33 2333233 34443 45 899999985 22222222 2222223322211 1111
Q ss_pred -cHHHHHhcccc---------ccCCcEEEEecCCccccc
Q psy736 81 -GFNWKLREKNR---------HKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 81 -G~~~a~n~g~~---------~A~gd~l~flD~D~~~~~ 109 (304)
| ...||.+.+ ++..-++.|-|+|-...-
T Consensus 159 rg-~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~Ydl 196 (330)
T KOG1476|consen 159 RG-WEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDL 196 (330)
T ss_pred cc-hhHHHHHHHHHHHhcccccccceEEEEccCCcchhH
Confidence 2 345666622 255668888888876553
No 101
>KOG3736|consensus
Probab=69.05 E-value=0.76 Score=44.68 Aligned_cols=39 Identities=26% Similarity=0.419 Sum_probs=32.8
Q ss_pred eeceeeeeCCCceeeeccCCc---eecccccCCCcccccCCh
Q psy736 118 VCPIIDVISDQTFEYITASDM---TWGGFNWKLNFRWYRVPP 156 (304)
Q Consensus 118 ~~~~i~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 156 (304)
+.+++++++.+.|.+.|.++. .|||.+..++++.|..+.
T Consensus 315 MaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG 356 (578)
T KOG3736|consen 315 MAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGG 356 (578)
T ss_pred cCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCC
Confidence 456678999999999998775 799999999999887654
No 102
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=68.75 E-value=27 Score=28.58 Aligned_cols=81 Identities=11% Similarity=0.031 Sum_probs=43.3
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHH-hhcc-ccceeecccCCCcHHHHHhcccccc---CC
Q psy736 21 NEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVI-SDQT-FEYITASDMTWGGFNWKLREKNRHK---KT 95 (304)
Q Consensus 21 N~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~-~~~~-~~~i~~~~~~~~G~~~a~n~g~~~A---~g 95 (304)
+.. ..|..+++.+++.. ..+|+||-+...+. .+.+... .... ..++ .......|...++..|++++ ..
T Consensus 24 ~g~-~ll~~~i~~~~~~~----~~~i~vv~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~G~~~si~~gl~~~~~~~~ 96 (190)
T TIGR03202 24 GET-TLGSASLKTALSSR----LSKVIVVIGEKYAH-LSWLDPYLLADERIMLV-CCRDACEGQAHSLKCGLRKAEAMGA 96 (190)
T ss_pred CCc-cHHHHHHHHHHhCC----CCcEEEEeCCccch-hhhhhHhhhcCCCeEEE-ECCChhhhHHHHHHHHHHHhccCCC
Confidence 444 58888887765532 22888887654322 1111111 1111 1111 11222346667777777765 47
Q ss_pred cEEEEecCCcccc
Q psy736 96 VVCPIIDVISDQT 108 (304)
Q Consensus 96 d~l~flD~D~~~~ 108 (304)
|+++++++|.-.-
T Consensus 97 d~vlv~~~D~P~v 109 (190)
T TIGR03202 97 DAVVILLADQPFL 109 (190)
T ss_pred CeEEEEeCCCCCC
Confidence 9999999996433
No 103
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=67.70 E-value=1e+02 Score=28.38 Aligned_cols=52 Identities=8% Similarity=0.068 Sum_probs=34.2
Q ss_pred eeeeEehHHHhHhCCCCCCCcccccccHHHHHHHH-------HcCCeEEEEeccEEEeecc
Q psy736 178 GLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVW-------QCGGILEIIPCSHVGHVFR 231 (304)
Q Consensus 178 ~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~-------~~G~~i~~~p~~~v~H~~r 231 (304)
-.|++.|++++++-..-+.|..| .|+.+.+-++ ....++...-..+|.|...
T Consensus 234 mGmAfNRs~W~kI~~ca~~FC~y--DDYNWDwSL~~ls~~cl~~~~kvL~~~~PRV~HiGd 292 (356)
T PF05060_consen 234 MGMAFNRSTWNKIKSCADEFCTY--DDYNWDWSLQHLSQRCLPSPLKVLVPKGPRVFHIGD 292 (356)
T ss_pred ceeEecHHHHHHHHHHHHHhCCC--CCCCchHHHHHHHhhccCCccEEEEEccCcEEEccc
Confidence 34889999999998887777654 4444333332 2245666555668999754
No 104
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=66.46 E-value=14 Score=31.22 Aligned_cols=85 Identities=9% Similarity=-0.021 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccc--eeecccC----------CCc----HHHHHhc
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEY--ITASDMT----------WGG----FNWKLRE 88 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~--i~~~~~~----------~~G----~~~a~n~ 88 (304)
..+.-++.|++..+..+....|.|++++.+++..+.++......... +...... ..+ ..-++-.
T Consensus 12 ~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~ 91 (250)
T PF01501_consen 12 EGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFSPATFARLF 91 (250)
T ss_dssp HHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGGGGGGGGGG
T ss_pred HHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccccccHHHHHHhh
Confidence 55666788888877642345788898887766555554444332221 1111100 000 0001111
Q ss_pred cccc-cCCcEEEEecCCccccc
Q psy736 89 KNRH-KKTVVCPIIDVISDQTF 109 (304)
Q Consensus 89 g~~~-A~gd~l~flD~D~~~~~ 109 (304)
-... ..-|-+++||+|+.+..
T Consensus 92 i~~ll~~~drilyLD~D~lv~~ 113 (250)
T PF01501_consen 92 IPDLLPDYDRILYLDADTLVLG 113 (250)
T ss_dssp HHHHSTTSSEEEEE-TTEEESS
T ss_pred hHHHHhhcCeEEEEcCCeeeec
Confidence 1233 56799999999998764
No 105
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=65.91 E-value=15 Score=32.33 Aligned_cols=91 Identities=16% Similarity=0.053 Sum_probs=44.7
Q ss_pred EEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhh-c---cccceeecccC--C---C--cHH
Q psy736 15 IVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISD-Q---TFEYITASDMT--W---G--GFN 83 (304)
Q Consensus 15 IIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~-~---~~~~i~~~~~~--~---~--G~~ 83 (304)
|||++.+........+|..|.. ....++.||+.-- ..|-+.+..+.+.. + ....-...... . . |+.
T Consensus 4 IVi~~g~~~~~~a~~lI~~LR~-~g~~LPIEI~~~~--~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~~~~ 80 (271)
T PF11051_consen 4 IVITAGDKYLWLALRLIRVLRR-LGNTLPIEIIYPG--DDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKKGFQ 80 (271)
T ss_pred EEEEecCccHHHHHHHHHHHHH-hCCCCCEEEEeCC--ccccCHHHHHHHhhhhhhheecceEEeeccccccccccCCch
Confidence 7888888652333455555443 4445677998862 12223333333332 0 00000000000 0 0 221
Q ss_pred HHHhccccccCCcEEEEecCCccccc
Q psy736 84 WKLREKNRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 84 ~a~n~g~~~A~gd~l~flD~D~~~~~ 109 (304)
..-.++-.++=|=++|||+|.++-.
T Consensus 81 -~K~lA~l~ssFeevllLDaD~vpl~ 105 (271)
T PF11051_consen 81 -NKWLALLFSSFEEVLLLDADNVPLV 105 (271)
T ss_pred -hhhhhhhhCCcceEEEEcCCccccc
Confidence 1122344667788999999998764
No 106
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=65.58 E-value=29 Score=29.82 Aligned_cols=48 Identities=15% Similarity=0.138 Sum_probs=32.6
Q ss_pred EEEEee--CCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHh
Q psy736 15 IVIVFH--NEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVIS 65 (304)
Q Consensus 15 IIIp~y--N~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~ 65 (304)
|++.+- |-. ..+.-++.||+..+.. ...+.|++++-++...+.++.+.
T Consensus 3 i~~~a~d~~y~-~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~ 52 (246)
T cd00505 3 IVIVATGDEYL-RGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLR 52 (246)
T ss_pred EEEEecCcchh-HHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHH
Confidence 444443 444 7778889999987654 34889998886666666666554
No 107
>KOG3738|consensus
Probab=64.98 E-value=0.66 Score=42.61 Aligned_cols=63 Identities=27% Similarity=0.446 Sum_probs=42.4
Q ss_pred eeeeceeeeeCCCceeeeccCCc---eecccccCCCcccccCChhh-h---hhcCC--CCCCccccccccce
Q psy736 116 TVVCPIIDVISDQTFEYITASDM---TWGGFNWKLNFRWYRVPPRE-M---MRRGG--DRSSPLRTPTMAGG 178 (304)
Q Consensus 116 ~~~~~~i~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~---~~~~~--~~~~~~~~~~~~G~ 178 (304)
.+..+++..++...|.+.|.++. .|||.+..+.++.|...... . ++.++ ...+|+..|..+|.
T Consensus 291 P~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRkrHpy~FP~gs~~ 362 (559)
T KOG3738|consen 291 PAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGN 362 (559)
T ss_pred ccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhccCCCcCCCCCCc
Confidence 34566778999999999998775 89999999999887754321 0 12211 34567766665544
No 108
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=64.72 E-value=40 Score=27.60 Aligned_cols=74 Identities=9% Similarity=0.035 Sum_probs=41.3
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccCCcEEEE
Q psy736 21 NEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKKTVVCPI 100 (304)
Q Consensus 21 N~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~f 100 (304)
+.. ..|..+++.+. . . ..+|+||-+... . .+.......+........|...++..|++....+++++
T Consensus 28 ~g~-~ll~~~i~~l~-~---~-~~~i~vv~~~~~---~----~~~~~~~~~v~~~~~~~~g~~~~i~~~l~~~~~~~vlv 94 (193)
T PRK00317 28 NGK-PLIQHVIERLA-P---Q-VDEIVINANRNL---A----RYAAFGLPVIPDSLADFPGPLAGILAGLKQARTEWVLV 94 (193)
T ss_pred CCE-EHHHHHHHHHh-h---h-CCEEEEECCCCh---H----HHHhcCCcEEeCCCCCCCCCHHHHHHHHHhcCCCeEEE
Confidence 444 57888888865 1 1 237888743211 1 11111112222111112466677777877777899999
Q ss_pred ecCCccc
Q psy736 101 IDVISDQ 107 (304)
Q Consensus 101 lD~D~~~ 107 (304)
+++|.-.
T Consensus 95 ~~~D~P~ 101 (193)
T PRK00317 95 VPCDTPF 101 (193)
T ss_pred EcCCcCC
Confidence 9999743
No 109
>PLN02893 Cellulose synthase-like protein
Probab=64.71 E-value=13 Score=37.43 Aligned_cols=56 Identities=16% Similarity=0.091 Sum_probs=45.8
Q ss_pred CCCCCeEEEEEe---eCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 8 TFLPTTSIVIVF---HNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 8 ~~~p~vSIIIp~---yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
+++|.|-|.|+| +.|+.-....|+.|+++-+||....-+.|-|||.+.-|..-+.+
T Consensus 98 ~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~E 156 (734)
T PLN02893 98 SDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFME 156 (734)
T ss_pred ccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHH
Confidence 569999999999 67774567779999999999866678999999988877654443
No 110
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=64.43 E-value=21 Score=29.55 Aligned_cols=89 Identities=13% Similarity=0.026 Sum_probs=51.1
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcc--ccceeec-ccCCCcHHHHH
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQT--FEYITAS-DMTWGGFNWKL 86 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~--~~~i~~~-~~~~~G~~~a~ 86 (304)
.|+. .+|.-+. ..|..+++++.+.. . -+|+||-+...+. +.+.+.... ...+... .....|.+.++
T Consensus 19 ~pK~--ll~v~g~--pli~~~l~~l~~~g---~-~~i~vv~~~~~~~---i~~~~~~~~~~~~~i~~~~~~~~~g~~~al 87 (217)
T cd04181 19 RPKP--LLPIAGK--PILEYIIERLARAG---I-DEIILVVGYLGEQ---IEEYFGDGSKFGVNIEYVVQEEPLGTAGAV 87 (217)
T ss_pred CCcc--ccEECCe--eHHHHHHHHHHHCC---C-CEEEEEeccCHHH---HHHHHcChhhcCceEEEEeCCCCCccHHHH
Confidence 4554 4444555 48888999877643 2 2777776643332 222332210 0112111 22235777888
Q ss_pred hccccccCCcEEEEecCCccccc
Q psy736 87 REKNRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 87 n~g~~~A~gd~l~flD~D~~~~~ 109 (304)
..+......+.++++++|.....
T Consensus 88 ~~~~~~~~~~~~lv~~~D~~~~~ 110 (217)
T cd04181 88 RNAEDFLGDDDFLVVNGDVLTDL 110 (217)
T ss_pred HHhhhhcCCCCEEEEECCeecCc
Confidence 87877667788999999987654
No 111
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=62.30 E-value=17 Score=38.04 Aligned_cols=84 Identities=10% Similarity=-0.000 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCC------CCchHHHHHHhh----------ccccceeecccCCCc-----HH
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASE------RVVCPIIDVISD----------QTFEYITASDMTWGG-----FN 83 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~------d~t~~ii~~~~~----------~~~~~i~~~~~~~~G-----~~ 83 (304)
+.++.-|+++.++... .+.|--+.+||+. .+=..|++.+.+ ..+..+...+++++| ++
T Consensus 457 Ee~k~RIe~l~a~~~~-~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KA 535 (1079)
T PLN02638 457 EEFKVRINGLVAKAQK-VPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKA 535 (1079)
T ss_pred HHHHHHHHHHHhhccc-cCCccccccCCccCCCCCCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCccccc
Confidence 5566667776533211 2224455677761 111234444431 122223333444444 47
Q ss_pred HHHhccc----cccCCcEEEEecCCccccc
Q psy736 84 WKLREKN----RHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 84 ~a~n~g~----~~A~gd~l~flD~D~~~~~ 109 (304)
.|+|..+ -...|+||+-||.|..+..
T Consensus 536 GAMNaLlRVSavmTNaPfILNLDCDmYiNn 565 (1079)
T PLN02638 536 GAMNALVRVSAVLTNGPFLLNLDCDHYINN 565 (1079)
T ss_pred chHHHHHHHhhhccCCCeEeecccCcccCc
Confidence 7899887 5679999999999998873
No 112
>PLN02195 cellulose synthase A
Probab=58.63 E-value=15 Score=38.15 Aligned_cols=28 Identities=7% Similarity=-0.270 Sum_probs=23.3
Q ss_pred HHHHHhcccc----ccCCcEEEEecCCccccc
Q psy736 82 FNWKLREKNR----HKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 82 ~~~a~n~g~~----~A~gd~l~flD~D~~~~~ 109 (304)
++.++|..++ ...|++|+.||+|..+.+
T Consensus 437 KAGamNallrvSavmTNap~il~lDcDmy~n~ 468 (977)
T PLN02195 437 KAGAENALVRVSAVLTNAPYILNLDCDHYVNN 468 (977)
T ss_pred ccchhHHHHHHhhhccCCCeEEEecCccccCc
Confidence 4678888876 567999999999988877
No 113
>KOG4179|consensus
Probab=57.23 E-value=7.4 Score=36.09 Aligned_cols=55 Identities=15% Similarity=0.064 Sum_probs=33.7
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhh
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISD 66 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~ 66 (304)
|.|-+.+.++|-+ ..+.-.+--+-+++++...--|.+--|.+.|.+.++++.+-+
T Consensus 3 ptvl~alL~rn~a-h~lp~Flg~le~~Dypk~r~aiw~~~dh~~d~~ie~freWL~ 57 (568)
T KOG4179|consen 3 PTVLCALLFRNFA-HSLPLFLGELEEGDYPKIRPAIWIGVDHEHDHAIEYFREWLE 57 (568)
T ss_pred ceeehHHHHHHHH-hhhhhccCChhccCCcccccceEEecCccccchHHHHHHHHH
Confidence 4444555556666 555555544455667655556777777788887777765543
No 114
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=57.03 E-value=34 Score=28.38 Aligned_cols=89 Identities=9% Similarity=-0.018 Sum_probs=50.1
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcc---ccceeecccCCCcHHHHH
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQT---FEYITASDMTWGGFNWKL 86 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~---~~~i~~~~~~~~G~~~a~ 86 (304)
.||- .+|.-+.+ .|...|+.+.+.. . -+|+||-+...+. +.+.+.... ............|.+.++
T Consensus 19 ~pK~--ll~i~g~p--li~~~l~~l~~~g---~-~~v~vv~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~~G~~~~l 87 (223)
T cd06915 19 LPKP--LAPVAGRP--FLEYLLEYLARQG---I-SRIVLSVGYLAEQ---IEEYFGDGYRGGIRIYYVIEPEPLGTGGAI 87 (223)
T ss_pred CCcc--ccEECCcc--hHHHHHHHHHHCC---C-CEEEEEcccCHHH---HHHHHcCccccCceEEEEECCCCCcchHHH
Confidence 4554 45555654 8888998877642 2 2777766533222 222333211 111111222345667777
Q ss_pred hccccccCCcEEEEecCCccccc
Q psy736 87 REKNRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 87 n~g~~~A~gd~l~flD~D~~~~~ 109 (304)
-.+.+....+.++++++|...++
T Consensus 88 ~~a~~~~~~~~~lv~~~D~~~~~ 110 (223)
T cd06915 88 KNALPKLPEDQFLVLNGDTYFDV 110 (223)
T ss_pred HHHHhhcCCCCEEEEECCcccCC
Confidence 77777666788899999986643
No 115
>COG2068 Uncharacterized MobA-related protein [General function prediction only]
Probab=56.03 E-value=70 Score=26.82 Aligned_cols=73 Identities=10% Similarity=0.061 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeecccCCCcHHHHHhccccccCCc--EEEEe
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASDMTWGGFNWKLREKNRHKKTV--VCPII 101 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~~~~~G~~~a~n~g~~~A~gd--~l~fl 101 (304)
..+..+++..++... -|||||-..- ..+..+..... ...++ ..+....|.+..+..|++++.++ .++++
T Consensus 32 plv~~~~~~a~~a~~----~~vivV~g~~---~~~~~~a~~~~~~~~~v-~npd~~~Gls~Sl~ag~~a~~~~~~~v~~~ 103 (199)
T COG2068 32 PLVRASAETALSAGL----DRVIVVTGHR---VAEAVEALLAQLGVTVV-VNPDYAQGLSTSLKAGLRAADAEGDGVVLM 103 (199)
T ss_pred cHHHHHHHHHHhcCC----CeEEEEeCcc---hhhHHHhhhccCCeEEE-eCcchhhhHhHHHHHHHHhcccCCCeEEEE
Confidence 366677777665432 2899988764 22222233222 22223 23344679999999999888876 88888
Q ss_pred cCCc
Q psy736 102 DVIS 105 (304)
Q Consensus 102 D~D~ 105 (304)
-+|.
T Consensus 104 lgDm 107 (199)
T COG2068 104 LGDM 107 (199)
T ss_pred eCCC
Confidence 8885
No 116
>PLN02189 cellulose synthase
Probab=55.13 E-value=25 Score=36.79 Aligned_cols=84 Identities=10% Similarity=0.005 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCC------CCchHHHHHHhhc----------cccceeecccCCCc-----HH
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASE------RVVCPIIDVISDQ----------TFEYITASDMTWGG-----FN 83 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~------d~t~~ii~~~~~~----------~~~~i~~~~~~~~G-----~~ 83 (304)
+.++.-|+++.++... .+.|--+.+||+. .+=..|++.+.+. .+..+...+++++| ++
T Consensus 439 Ee~kvRI~~l~a~~~~-~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KA 517 (1040)
T PLN02189 439 EEFKVRINAIVAKAQK-VPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKA 517 (1040)
T ss_pred HHHHHHHHHHHhhcCc-cCCccceeccCccCCCCCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccch
Confidence 4555566665532211 2235556788871 1112344444331 12233333343444 57
Q ss_pred HHHhccc----cccCCcEEEEecCCccccc
Q psy736 84 WKLREKN----RHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 84 ~a~n~g~----~~A~gd~l~flD~D~~~~~ 109 (304)
.|+|..+ -...|+||+-||.|..+.+
T Consensus 518 GAMNaLlRVSavmTNaPfILNLDCDmY~Nn 547 (1040)
T PLN02189 518 GAMNALIRVSAVLTNAPFMLNLDCDHYINN 547 (1040)
T ss_pred hhHHHHHHHhhhccCCCeEEEccCccccCc
Confidence 8999987 5689999999999999976
No 117
>KOG3737|consensus
Probab=53.16 E-value=4.6 Score=37.22 Aligned_cols=38 Identities=24% Similarity=0.395 Sum_probs=29.8
Q ss_pred eceeeeeCCCceeeeccCCc---eecccccCCCcccccCCh
Q psy736 119 CPIIDVISDQTFEYITASDM---TWGGFNWKLNFRWYRVPP 156 (304)
Q Consensus 119 ~~~i~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 156 (304)
.+++.+++...|...|.++. .|||.+..++++.|....
T Consensus 334 AGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG 374 (603)
T KOG3737|consen 334 AGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGG 374 (603)
T ss_pred ccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCC
Confidence 45567899888888887764 799999999888877543
No 118
>PLN03153 hypothetical protein; Provisional
Probab=52.90 E-value=20 Score=34.48 Aligned_cols=49 Identities=22% Similarity=0.298 Sum_probs=30.5
Q ss_pred cccceeeeEehHHHhHhCCC-CCCCc----ccccccHHHHHHHHHcCCeEEEEec
Q psy736 174 TMAGGLFAIDKDYFYELGSY-DEGMD----IWGGENLEMSFRVWQCGGILEIIPC 223 (304)
Q Consensus 174 ~~~G~~~~irr~~f~~iGGF-De~~~----~~g~ED~dl~~R~~~~G~~i~~~p~ 223 (304)
...|+.+++++.+.+++-.+ |+-.. .| ++|.-|..=+.+.|-++...|.
T Consensus 261 A~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~-~gD~rL~~CL~elGV~LT~~~g 314 (537)
T PLN03153 261 AFGGGGIAISYPLAEALSRILDDCLDRYPKLY-GSDDRLHACITELGVPLSREPG 314 (537)
T ss_pred ccCCceEEEcHHHHHHHHHHhhhhhhhcccCC-CcHHHHHHHHHHcCCCceecCC
Confidence 34577788999776665443 32111 24 4787787777788877655543
No 119
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=52.50 E-value=63 Score=26.01 Aligned_cols=80 Identities=9% Similarity=0.071 Sum_probs=43.0
Q ss_pred EEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeecccCCCcHHHHHhcccc-ccC
Q psy736 17 IVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASDMTWGGFNWKLREKNR-HKK 94 (304)
Q Consensus 17 Ip~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~~~~~G~~~a~n~g~~-~A~ 94 (304)
++..+ . ..|..+++.+.+.. . .+||||=+...+. +++.+... ...++... ....|...++..|++ ...
T Consensus 20 l~~~g-~-pll~~~i~~l~~~~---~-~~iivv~~~~~~~---~~~~~~~~~~v~~v~~~-~~~~g~~~si~~~l~~~~~ 89 (188)
T TIGR03310 20 LPYKG-K-TILEHVVDNALRLF---F-DEVILVLGHEADE---LVALLANHSNITLVHNP-QYAEGQSSSIKLGLELPVQ 89 (188)
T ss_pred cccCC-e-eHHHHHHHHHHHcC---C-CcEEEEeCCcHHH---HHHHhccCCCeEEEECc-ChhcCHHHHHHHHhcCCCC
Confidence 34444 3 58888888877542 1 2666654432221 22233221 11222211 112466677777776 456
Q ss_pred CcEEEEecCCcc
Q psy736 95 TVVCPIIDVISD 106 (304)
Q Consensus 95 gd~l~flD~D~~ 106 (304)
.+.++++++|.-
T Consensus 90 ~~~vlv~~~D~P 101 (188)
T TIGR03310 90 SDGYLFLLGDQP 101 (188)
T ss_pred CCEEEEEeCCcC
Confidence 789999999963
No 120
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=52.18 E-value=92 Score=24.30 Aligned_cols=76 Identities=8% Similarity=0.019 Sum_probs=49.8
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc-CCcEEE
Q psy736 21 NEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK-KTVVCP 99 (304)
Q Consensus 21 N~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A-~gd~l~ 99 (304)
+.. ..|.++++.+.+... -+|+||-+. +. +.+.+.......+... ..+.|...++-.++... ..+.++
T Consensus 22 ~g~-~li~~~l~~l~~~~~----~~Ivvv~~~--~~---~~~~~~~~~~~~v~~~-~~~~G~~~sl~~a~~~~~~~~~vl 90 (160)
T PF12804_consen 22 GGK-PLIERVLEALREAGV----DDIVVVTGE--EE---IYEYLERYGIKVVVDP-EPGQGPLASLLAALSQLPSSEPVL 90 (160)
T ss_dssp TTE-EHHHHHHHHHHHHTE----SEEEEEEST--HH---HHHHHTTTTSEEEE-S-TSSCSHHHHHHHHHHTSTTSSEEE
T ss_pred CCc-cHHHHHHHHhhccCC----ceEEEecCh--HH---HHHHHhccCceEEEec-cccCChHHHHHHHHHhcccCCCcE
Confidence 555 688999988766531 288887775 22 2222322222333322 22578899999999888 899999
Q ss_pred EecCCccc
Q psy736 100 IIDVISDQ 107 (304)
Q Consensus 100 flD~D~~~ 107 (304)
++.+|...
T Consensus 91 v~~~D~p~ 98 (160)
T PF12804_consen 91 VLPCDQPF 98 (160)
T ss_dssp EEETTETT
T ss_pred EEeCCccc
Confidence 99999854
No 121
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=47.59 E-value=58 Score=27.18 Aligned_cols=90 Identities=9% Similarity=-0.062 Sum_probs=50.6
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeeccc--CCCcHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASDM--TWGGFNWK 85 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~~--~~~G~~~a 85 (304)
..|+. .+|.-+++ .|...|+++.+.. . .+|+||-+...+. +.+.+... ..-.+....+ ...|.+.+
T Consensus 19 ~~pK~--llpi~g~~--li~~~l~~l~~~g---i-~~i~iv~~~~~~~---i~~~~~~~~~~~~i~~~~~~~~~~g~~~~ 87 (221)
T cd06422 19 TRPKP--LVPVAGKP--LIDHALDRLAAAG---I-RRIVVNTHHLADQ---IEAHLGDSRFGLRITISDEPDELLETGGG 87 (221)
T ss_pred CCCCc--eeeECCEE--HHHHHHHHHHHCC---C-CEEEEEccCCHHH---HHHHHhcccCCceEEEecCCCcccccHHH
Confidence 34555 45555554 8888999977653 2 2777776543332 22233321 0001111111 23466777
Q ss_pred HhccccccCCcEEEEecCCccccc
Q psy736 86 LREKNRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 86 ~n~g~~~A~gd~l~flD~D~~~~~ 109 (304)
+..+......+.++++++|.....
T Consensus 88 l~~~~~~~~~~~~lv~~~D~i~~~ 111 (221)
T cd06422 88 IKKALPLLGDEPFLVVNGDILWDG 111 (221)
T ss_pred HHHHHHhcCCCCEEEEeCCeeeCC
Confidence 777766655578889999987765
No 122
>PLN02195 cellulose synthase A
Probab=46.13 E-value=43 Score=34.89 Aligned_cols=56 Identities=13% Similarity=0.023 Sum_probs=44.6
Q ss_pred CCCCCeEEEEEeeC---CChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 8 TFLPTTSIVIVFHN---EAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 8 ~~~p~vSIIIp~yN---~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
+++|.|-|.|+|=+ |+.-....|+.|+++-+||....-+.|-|||.+.-|..-+.+
T Consensus 249 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~E 307 (977)
T PLN02195 249 SQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVE 307 (977)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHH
Confidence 56999999999965 443466779999999999866678999999998877655444
No 123
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=45.25 E-value=73 Score=25.41 Aligned_cols=77 Identities=10% Similarity=0.028 Sum_probs=42.7
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccC--CcEE
Q psy736 21 NEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKK--TVVC 98 (304)
Q Consensus 21 N~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~--gd~l 98 (304)
+.. ..|..+++.+.... . .+|+||=+..... ..+........++. ......|...++..|++.+. .|++
T Consensus 24 ~g~-~li~~~i~~l~~~~---~-~~i~vv~~~~~~~---~~~~~~~~~~~~~~-~~~~~~G~~~~i~~al~~~~~~~~~v 94 (186)
T cd04182 24 DGK-PLLRHALDAALAAG---L-SRVIVVLGAEADA---VRAALAGLPVVVVI-NPDWEEGMSSSLAAGLEALPADADAV 94 (186)
T ss_pred CCe-eHHHHHHHHHHhCC---C-CcEEEECCCcHHH---HHHHhcCCCeEEEe-CCChhhCHHHHHHHHHHhccccCCEE
Confidence 344 58888888876541 2 2677664422111 11111111111111 11223577788888887776 7999
Q ss_pred EEecCCcc
Q psy736 99 PIIDVISD 106 (304)
Q Consensus 99 ~flD~D~~ 106 (304)
+++.+|.-
T Consensus 95 lv~~~D~P 102 (186)
T cd04182 95 LILLADQP 102 (186)
T ss_pred EEEeCCCC
Confidence 99999973
No 124
>PLN02436 cellulose synthase A
Probab=44.93 E-value=47 Score=34.95 Aligned_cols=56 Identities=13% Similarity=0.064 Sum_probs=44.3
Q ss_pred CCCCCeEEEEEeeC---CChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 8 TFLPTTSIVIVFHN---EAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 8 ~~~p~vSIIIp~yN---~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
+++|.|-|.|+|=+ |+.-....|+.|+++-+||....-+.|-|||.+.-|..-+.+
T Consensus 362 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~E 420 (1094)
T PLN02436 362 SELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSE 420 (1094)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHH
Confidence 56999999999965 443466779999999999866678999999988877654443
No 125
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=44.88 E-value=53 Score=34.49 Aligned_cols=56 Identities=13% Similarity=0.068 Sum_probs=44.3
Q ss_pred CCCCCeEEEEEeeC---CChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 8 TFLPTTSIVIVFHN---EAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 8 ~~~p~vSIIIp~yN---~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
+.+|.|-|.|+|=+ |+.-....|+.|+++-+||....-+.|-|||.+.-|.+-+.+
T Consensus 284 ~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~E 342 (1044)
T PLN02915 284 NRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSE 342 (1044)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHH
Confidence 45999999999965 443466779999999999866678999999998877655443
No 126
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=44.13 E-value=69 Score=27.42 Aligned_cols=41 Identities=10% Similarity=0.093 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhh
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISD 66 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~ 66 (304)
..+..++.|++..+.. ..+-|.|+.++-++...+.++.+..
T Consensus 13 ~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~ 53 (248)
T cd04194 13 PYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLK 53 (248)
T ss_pred HHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHH
Confidence 6677788998886653 2357888888777666666665533
No 127
>PLN02189 cellulose synthase
Probab=43.54 E-value=49 Score=34.72 Aligned_cols=56 Identities=14% Similarity=0.093 Sum_probs=44.3
Q ss_pred CCCCCeEEEEEeeC---CChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 8 TFLPTTSIVIVFHN---EAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 8 ~~~p~vSIIIp~yN---~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
+.+|.|-|.|+|=+ |+.-....|+.|+++-+||....-+.|-|||.+.-|..-+.+
T Consensus 328 ~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~E 386 (1040)
T PLN02189 328 NMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSE 386 (1040)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHH
Confidence 45999999999965 443466779999999999866678999999988877655444
No 128
>PLN02400 cellulose synthase
Probab=42.67 E-value=50 Score=34.81 Aligned_cols=56 Identities=14% Similarity=0.074 Sum_probs=44.1
Q ss_pred CCCCCeEEEEEeeC---CChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 8 TFLPTTSIVIVFHN---EAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 8 ~~~p~vSIIIp~yN---~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
+++|.|-|.|+|-+ |+.-....|+.|+++-+||....-+.|-|||.+.-|..-+.+
T Consensus 353 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~E 411 (1085)
T PLN02400 353 SQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSE 411 (1085)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHH
Confidence 56999999999965 443466779999999999876678999999988877654433
No 129
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=42.49 E-value=51 Score=34.74 Aligned_cols=56 Identities=14% Similarity=0.076 Sum_probs=44.5
Q ss_pred CCCCCeEEEEEeeC---CChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 8 TFLPTTSIVIVFHN---EAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 8 ~~~p~vSIIIp~yN---~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
+++|.|-|.|+|=+ |+.-....|+.|+++-+||....-+.|-|||.+.-|..-+.+
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~E 404 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSE 404 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHH
Confidence 56999999999965 443466779999999999866678999999998877655444
No 130
>KOG1332|consensus
Probab=42.25 E-value=9.2 Score=33.07 Aligned_cols=17 Identities=53% Similarity=0.936 Sum_probs=12.0
Q ss_pred eeeeccc---cccccccccc
Q psy736 286 LSYSSWF---SGSILASCSY 302 (304)
Q Consensus 286 ~~~~~~~---~~~~~~~~~~ 302 (304)
.-=.+|. .|.|||||||
T Consensus 59 Vwqv~wahPk~G~iLAScsY 78 (299)
T KOG1332|consen 59 VWKVAWAHPKFGTILASCSY 78 (299)
T ss_pred eeEEeecccccCcEeeEeec
Confidence 3334554 5999999998
No 131
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=40.95 E-value=1e+02 Score=24.61 Aligned_cols=72 Identities=7% Similarity=-0.077 Sum_probs=43.5
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccCCcEEEE
Q psy736 21 NEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKKTVVCPI 100 (304)
Q Consensus 21 N~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~f 100 (304)
+.. ..|..+++.+... . .+|+||-+..... .......++... ....|...++..|++....+.+++
T Consensus 24 ~g~-~ll~~~i~~l~~~-~----~~iivv~~~~~~~-------~~~~~~~~v~~~-~~~~G~~~si~~~l~~~~~~~vlv 89 (181)
T cd02503 24 GGK-PLLEHVLERLKPL-V----DEVVISANRDQER-------YALLGVPVIPDE-PPGKGPLAGILAALRAAPADWVLV 89 (181)
T ss_pred CCE-EHHHHHHHHHHhh-c----CEEEEECCCChHH-------HhhcCCcEeeCC-CCCCCCHHHHHHHHHhcCCCeEEE
Confidence 444 5888888887643 1 2777775533221 111111222221 134577788888888888899999
Q ss_pred ecCCcc
Q psy736 101 IDVISD 106 (304)
Q Consensus 101 lD~D~~ 106 (304)
+.+|.-
T Consensus 90 ~~~D~P 95 (181)
T cd02503 90 LACDMP 95 (181)
T ss_pred EeCCcC
Confidence 999974
No 132
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=40.18 E-value=44 Score=27.35 Aligned_cols=14 Identities=29% Similarity=0.017 Sum_probs=11.0
Q ss_pred cCCcEEEEecCCcc
Q psy736 93 KKTVVCPIIDVISD 106 (304)
Q Consensus 93 A~gd~l~flD~D~~ 106 (304)
-+-.+++|+|+|..
T Consensus 46 ~~rgVIIfTDpD~~ 59 (174)
T TIGR00334 46 KKQGVIILTDPDFP 59 (174)
T ss_pred hcCCEEEEeCCCCc
Confidence 45688999999963
No 133
>KOG1022|consensus
Probab=39.00 E-value=79 Score=30.66 Aligned_cols=93 Identities=12% Similarity=0.039 Sum_probs=53.4
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc--cccceeecccCCCcHHHH
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ--TFEYITASDMTWGGFNWK 85 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~--~~~~i~~~~~~~~G~~~a 85 (304)
.++...+.|+-|||+- +.|.+.+..... . |. ..+|+||=|+-..+--+. .+... .+-.++... ...
T Consensus 440 ~~~qgFTlim~TYdR~-d~L~k~v~~ys~-v-Ps-L~kIlVVWNnq~k~PP~e--s~~~~~~VPlr~r~qk------eNs 507 (691)
T KOG1022|consen 440 GHSQGFTLIMLTYDRV-DLLKKLVKHYSR-V-PS-LKKILVVWNNQGKNPPPE--SLEPDIAVPLRFRQQK------ENS 507 (691)
T ss_pred CcccceeeeeehHHHH-HHHHHHHHHHhh-C-CC-cceEEEEecCCCCCCChh--hccccCCccEEEEehh------hhh
Confidence 3445689999999997 888888877433 3 32 459999987522211000 11111 111111111 223
Q ss_pred Hhcc---ccccCCcEEEEecCCcccccccc
Q psy736 86 LREK---NRHKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 86 ~n~g---~~~A~gd~l~flD~D~~~~~~~l 112 (304)
+|+- ...-+.+-++-+|+|.+++-+.|
T Consensus 508 LnNRF~~~peieT~AVL~IDDDIim~~ddl 537 (691)
T KOG1022|consen 508 LNNRFEPYPEIETEAVLEIDDDIIMPCDDL 537 (691)
T ss_pred hhcccccCcccccceeEEecCceeeecchh
Confidence 3333 45677889999999988765433
No 134
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=37.43 E-value=42 Score=28.92 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc---cceeecc--cCCCcHHHHHhccccccCCcEEE
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF---EYITASD--MTWGGFNWKLREKNRHKKTVVCP 99 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~---~~i~~~~--~~~~G~~~a~n~g~~~A~gd~l~ 99 (304)
+.|.++|++|.+..- .|++||-+|=..+ +++..-.+.. ..+.... ..|. ...+-.+-....++ ++
T Consensus 32 ~ii~~~i~~L~~~gi----~e~vvV~~g~~~~---lve~~l~~~~~~~~iv~N~~y~ktN~--~~Sl~~akd~~~~~-fi 101 (239)
T COG1213 32 EIIYRTIENLAKAGI----TEFVVVTNGYRAD---LVEEFLKKYPFNAKIVINSDYEKTNT--GYSLLLAKDYMDGR-FI 101 (239)
T ss_pred EeHHHHHHHHHHcCC----ceEEEEeccchHH---HHHHHHhcCCcceEEEeCCCcccCCc--eeEEeeehhhhcCc-EE
Confidence 488999999887653 3999999875544 3334333222 1122111 1122 33455566677788 67
Q ss_pred EecCCcccccccc
Q psy736 100 IIDVISDQTFEYI 112 (304)
Q Consensus 100 flD~D~~~~~~~l 112 (304)
.+|+|...+|..+
T Consensus 102 i~~sD~vye~~~~ 114 (239)
T COG1213 102 LVMSDHVYEPSIL 114 (239)
T ss_pred EEeCCEeecHHHH
Confidence 8899999988443
No 135
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase. This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in
Probab=36.50 E-value=1.4e+02 Score=25.10 Aligned_cols=89 Identities=8% Similarity=-0.015 Sum_probs=46.8
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcc---ccceeecccCCCcHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQT---FEYITASDMTWGGFNWK 85 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~---~~~i~~~~~~~~G~~~a 85 (304)
..|+. .+|.-++ ..|..+|+++.+.. . .+|+||-+...+. +.+.+.... .+..........|.+.+
T Consensus 20 ~~pK~--l~~i~g~--~li~~~l~~l~~~~---~-~~i~vv~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~g~~~s 88 (236)
T cd04189 20 TRPKQ--LIPVAGK--PIIQYAIEDLREAG---I-EDIGIVVGPTGEE---IKEALGDGSRFGVRITYILQEEPLGLAHA 88 (236)
T ss_pred CCCce--eeEECCc--chHHHHHHHHHHCC---C-CEEEEEcCCCHHH---HHHHhcchhhcCCeEEEEECCCCCChHHH
Confidence 34554 5555555 48888888877642 2 2777776653232 222332210 11111122223466777
Q ss_pred HhccccccC-CcEEEEecCCccccc
Q psy736 86 LREKNRHKK-TVVCPIIDVISDQTF 109 (304)
Q Consensus 86 ~n~g~~~A~-gd~l~flD~D~~~~~ 109 (304)
+..+..... .++ +++++|.....
T Consensus 89 l~~a~~~i~~~~~-li~~~D~~~~~ 112 (236)
T cd04189 89 VLAARDFLGDEPF-VVYLGDNLIQE 112 (236)
T ss_pred HHHHHHhcCCCCE-EEEECCeecCc
Confidence 777766544 555 45778877654
No 136
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=36.25 E-value=98 Score=25.61 Aligned_cols=76 Identities=8% Similarity=-0.025 Sum_probs=43.5
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccCCcEEEE
Q psy736 21 NEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKKTVVCPI 100 (304)
Q Consensus 21 N~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~f 100 (304)
+.. ..|..+++.+... . -+|+||-+.. + ....+......++.. .....|...++..|+.....+++++
T Consensus 31 ~g~-~ll~~~i~~l~~~----~-~~ivvv~~~~-~----~~~~~~~~~~~~i~~-~~~~~G~~~si~~~l~~~~~~~vlv 98 (200)
T PRK02726 31 QGV-PLLQRVARIAAAC----A-DEVYIITPWP-E----RYQSLLPPGCHWLRE-PPPSQGPLVAFAQGLPQIKTEWVLL 98 (200)
T ss_pred CCE-eHHHHHHHHHHhh----C-CEEEEECCCH-H----HHHhhccCCCeEecC-CCCCCChHHHHHHHHHhCCCCcEEE
Confidence 444 5788888887532 1 2677764421 1 111221111122221 1224577888888888888899999
Q ss_pred ecCCcccc
Q psy736 101 IDVISDQT 108 (304)
Q Consensus 101 lD~D~~~~ 108 (304)
+++|.-+.
T Consensus 99 ~~~D~P~i 106 (200)
T PRK02726 99 LACDLPRL 106 (200)
T ss_pred EeCCCCCC
Confidence 99997443
No 137
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=35.36 E-value=89 Score=27.67 Aligned_cols=47 Identities=19% Similarity=0.150 Sum_probs=34.1
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHH
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPII 61 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii 61 (304)
.++||....|-. ..+..+|.|++..... .+.+-|++|+.+++..+.+
T Consensus 2 ~~~iv~~~~~y~-~~~~~~i~Sil~n~~~--~~~fhii~d~~s~~~~~~l 48 (280)
T cd06431 2 HVAIVCAGYNAS-RDVVTLVKSVLFYRRN--PLHFHLITDEIARRILATL 48 (280)
T ss_pred EEEEEEccCCcH-HHHHHHHHHHHHcCCC--CEEEEEEECCcCHHHHHHH
Confidence 367788886655 8899999999987543 3588889887766644433
No 138
>PLN02248 cellulose synthase-like protein
Probab=34.13 E-value=87 Score=33.26 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=44.1
Q ss_pred CCCCCeEEEEEeeC---CChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHH
Q psy736 8 TFLPTTSIVIVFHN---EAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDV 63 (304)
Q Consensus 8 ~~~p~vSIIIp~yN---~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~ 63 (304)
+++|.|-|.|+|=+ |+.-....|+.|+++-+||....-+.|-|||.+.-|.+-+.+
T Consensus 364 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 364 SDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred ccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 46999999999965 443466779999999999866678999999988877654433
No 139
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=34.04 E-value=1.3e+02 Score=27.44 Aligned_cols=98 Identities=10% Similarity=-0.082 Sum_probs=54.0
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceee--ccc-------CCCc
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITA--SDM-------TWGG 81 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~--~~~-------~~~G 81 (304)
..+-|+..+=+.-...+.-+|.|++..... ..+.+.|++|+-+++..+.++.+.......+.. ++. ....
T Consensus 24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~~~~~~~~ 102 (334)
T PRK15171 24 NSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLKSLPSTKN 102 (334)
T ss_pred CceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHhCCcccCc
Confidence 456666655333236777789999876432 345899999888877666666654432111111 110 0011
Q ss_pred HHH---HHhccccc--cCCcEEEEecCCccccc
Q psy736 82 FNW---KLREKNRH--KKTVVCPIIDVISDQTF 109 (304)
Q Consensus 82 ~~~---a~n~g~~~--A~gd~l~flD~D~~~~~ 109 (304)
.+. .|-.-... ..-|-++.||+|+++..
T Consensus 103 ~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~ 135 (334)
T PRK15171 103 WTYATYFRFIIADYFIDKTDKVLYLDADIACKG 135 (334)
T ss_pred CCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecC
Confidence 111 11111121 24688999999997764
No 140
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=34.01 E-value=56 Score=28.43 Aligned_cols=47 Identities=11% Similarity=0.232 Sum_probs=26.9
Q ss_pred cceeeeEehHHHhHhC------CCCCCCc-ccccccHHHHHHHHH-cCCeEEEEe
Q psy736 176 AGGLFAIDKDYFYELG------SYDEGMD-IWGGENLEMSFRVWQ-CGGILEIIP 222 (304)
Q Consensus 176 ~G~~~~irr~~f~~iG------GFDe~~~-~~g~ED~dl~~R~~~-~G~~i~~~p 222 (304)
.|+-++++|.+.+++. .+-+... .-..||..|++=+.. .|.++.-.|
T Consensus 149 GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~ 203 (252)
T PF02434_consen 149 GGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSP 203 (252)
T ss_dssp GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-T
T ss_pred CCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeech
Confidence 3567889999999982 2322111 123699999988887 887766554
No 141
>KOG2264|consensus
Probab=33.91 E-value=65 Score=31.41 Aligned_cols=84 Identities=12% Similarity=0.114 Sum_probs=52.1
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-c-ccceeecccCCCcHHHHHhc-
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-T-FEYITASDMTWGGFNWKLRE- 88 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~-~~~i~~~~~~~~G~~~a~n~- 88 (304)
..+||+.||-++ +.|...|+.+-.-- +...||||=|...|+..++. +-.- . ...++... ..+|+
T Consensus 650 QFTvVmLTYERe-~VLm~sLeRL~gLP---YLnKvvVVWNspk~P~ddl~--WPdigvPv~viR~~~-------NsLNNR 716 (907)
T KOG2264|consen 650 QFTVVMLTYERE-AVLMGSLERLHGLP---YLNKVVVVWNSPKDPPDDLT--WPDIGVPVEVIRVAE-------NSLNNR 716 (907)
T ss_pred eEEEEEEEehHH-HHHHHHHHHhhCCc---ccceEEEEeCCCCCChhccc--CcCCCCceEEEEccc-------cccccc
Confidence 489999999999 99999998864433 24589999998877743210 0000 0 11122211 12222
Q ss_pred --cccccCCcEEEEecCCcccc
Q psy736 89 --KNRHKKTVVCPIIDVISDQT 108 (304)
Q Consensus 89 --g~~~A~gd~l~flD~D~~~~ 108 (304)
.+.....|-++=+|+|.-+-
T Consensus 717 FlPwd~IETEAvLS~DDDahLr 738 (907)
T KOG2264|consen 717 FLPWDRIETEAVLSLDDDAHLR 738 (907)
T ss_pred ccCchhhhheeeeecccchhhh
Confidence 25667788899999886544
No 142
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=33.84 E-value=40 Score=33.96 Aligned_cols=42 Identities=7% Similarity=-0.212 Sum_probs=28.1
Q ss_pred cccceeecccCCCc-----HHHHHhccc----cccCCcEEEEecCCccccc
Q psy736 68 TFEYITASDMTWGG-----FNWKLREKN----RHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 68 ~~~~i~~~~~~~~G-----~~~a~n~g~----~~A~gd~l~flD~D~~~~~ 109 (304)
.+..+...+++++| ++.|+|.-+ -...|.+++-||.|.....
T Consensus 165 lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn 215 (720)
T PF03552_consen 165 LPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINN 215 (720)
T ss_pred CCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccc
Confidence 33334444444444 367888774 4578999999999997764
No 143
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=33.60 E-value=70 Score=27.11 Aligned_cols=87 Identities=11% Similarity=-0.071 Sum_probs=50.7
Q ss_pred EEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc-c-ceee-cccCCCcHHHHHhccccc
Q psy736 16 VIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF-E-YITA-SDMTWGGFNWKLREKNRH 92 (304)
Q Consensus 16 IIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~-~-~i~~-~~~~~~G~~~a~n~g~~~ 92 (304)
.+|..|.. ..|...|+.+.+... .++|+|-.+.... .+-+.+..... . .+.. ......|.+.++..+...
T Consensus 24 ll~i~g~~-pli~~~l~~l~~~g~----~~ii~V~~~~~~~--~i~~~~~~~~~~~~~i~~i~~~~~~Gta~al~~a~~~ 96 (248)
T PF00483_consen 24 LLPIGGKY-PLIDYVLENLANAGI----KEIIVVVNGYKEE--QIEEHLGSGYKFGVKIEYIVQPEPLGTAGALLQALDF 96 (248)
T ss_dssp GSEETTEE-EHHHHHHHHHHHTTC----SEEEEEEETTTHH--HHHHHHTTSGGGTEEEEEEEESSSSCHHHHHHHTHHH
T ss_pred cceecCCC-cchhhhhhhhcccCC----ceEEEEEeecccc--cccccccccccccccceeeecccccchhHHHHHHHHH
Confidence 45666773 488888988877432 2755555433222 12233333211 1 1222 222345888998888777
Q ss_pred cCCcE----EEEecCCccccc
Q psy736 93 KKTVV----CPIIDVISDQTF 109 (304)
Q Consensus 93 A~gd~----l~flD~D~~~~~ 109 (304)
...+- ++++.+|.....
T Consensus 97 i~~~~~~~~~lv~~gD~i~~~ 117 (248)
T PF00483_consen 97 IEEEDDDEDFLVLNGDIIFDD 117 (248)
T ss_dssp HTTSEE-SEEEEETTEEEEST
T ss_pred hhhccccceEEEEeccccccc
Confidence 77664 899999987775
No 144
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=33.35 E-value=1.6e+02 Score=23.69 Aligned_cols=71 Identities=4% Similarity=-0.038 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeecccCCCcHHHHHhccccccCCcEEEEecC
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASDMTWGGFNWKLREKNRHKKTVVCPIIDV 103 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~flD~ 103 (304)
..|..+++.+... ..+|+|+-+..... ..... ....+........|...++..|+.....++++++++
T Consensus 28 pll~~~l~~l~~~-----~~~ivv~~~~~~~~------~~~~~~~~~~i~~~~~~~~g~~~si~~al~~~~~~~vlv~~~ 96 (186)
T TIGR02665 28 PLIEHVLARLRPQ-----VSDLAISANRNPER------YAQAGFGLPVVPDALADFPGPLAGILAGLRWAGTDWVLTVPC 96 (186)
T ss_pred EHHHHHHHHHHhh-----CCEEEEEcCCCHHH------HhhccCCCcEEecCCCCCCCCHHHHHHHHHhcCCCeEEEEec
Confidence 5888888887531 22777765432111 11111 112222111223577777877887777899999999
Q ss_pred Ccc
Q psy736 104 ISD 106 (304)
Q Consensus 104 D~~ 106 (304)
|.-
T Consensus 97 D~P 99 (186)
T TIGR02665 97 DTP 99 (186)
T ss_pred CCC
Confidence 963
No 145
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=32.30 E-value=2.3e+02 Score=22.74 Aligned_cols=42 Identities=24% Similarity=0.249 Sum_probs=31.9
Q ss_pred CeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCC
Q psy736 12 TTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASE 54 (304)
Q Consensus 12 ~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~ 54 (304)
++.|+.+..... ..+...++.-+....+...+|++.+-|...
T Consensus 2 ki~I~~vGk~k~-~~~~~~i~~Y~kRl~~~~~~e~~el~~~~~ 43 (157)
T PRK00103 2 KITIIAVGKLKP-KWLKDGIAEYLKRFPRYLKLELIEIPDEKR 43 (157)
T ss_pred eEEEEEEeccCc-HHHHHHHHHHHHhcCccCCceEEEecCCcC
Confidence 688999998877 788888888777665545569998877553
No 146
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=30.95 E-value=1.4e+02 Score=24.88 Aligned_cols=84 Identities=10% Similarity=0.069 Sum_probs=45.8
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcc
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREK 89 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g 89 (304)
.||- .+|.-+. ..|..+|+++.+.. . .+|+||-....+ .+.+.+......++. .....|.+.++..+
T Consensus 16 ~pK~--l~~v~gk--pli~~~i~~l~~~~---i-~~i~iv~~~~~~---~i~~~~~~~~~~~~~--~~~~~g~~~ai~~a 82 (229)
T cd02540 16 LPKV--LHPLAGK--PMLEHVLDAARALG---P-DRIVVVVGHGAE---QVKKALANPNVEFVL--QEEQLGTGHAVKQA 82 (229)
T ss_pred CChh--cceeCCc--cHHHHHHHHHHhCC---C-CeEEEEECCCHH---HHHHHhCCCCcEEEE--CCCCCCCHHHHHHH
Confidence 4554 4555555 48999999977642 2 265555532211 122222221112222 22234667777767
Q ss_pred ccccC--CcEEEEecCCcc
Q psy736 90 NRHKK--TVVCPIIDVISD 106 (304)
Q Consensus 90 ~~~A~--gd~l~flD~D~~ 106 (304)
..... .+.++++++|..
T Consensus 83 ~~~~~~~~~~vli~~~D~p 101 (229)
T cd02540 83 LPALKDFEGDVLVLYGDVP 101 (229)
T ss_pred HHhhccCCCeEEEEeCCcc
Confidence 65543 688999999983
No 147
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule. GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=30.38 E-value=3.2e+02 Score=22.77 Aligned_cols=92 Identities=9% Similarity=-0.080 Sum_probs=48.5
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHH-HHHhhccccc-eeecccCCCcHHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPII-DVISDQTFEY-ITASDMTWGGFNWKL 86 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii-~~~~~~~~~~-i~~~~~~~~G~~~a~ 86 (304)
..|+- .+|.-+++ .|..+|+++.++. . -+++||-.. .......+ +.+....... +........|-+.++
T Consensus 18 ~~pK~--ll~i~g~p--li~~~l~~l~~~g---~-~~ivvv~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~l 88 (231)
T cd04183 18 TYPKP--LIEVDGKP--MIEWVIESLAKIF---D-SRFIFICRD-EHNTKFHLDESLKLLAPNATVVELDGETLGAACTV 88 (231)
T ss_pred CCCce--eeEECCEE--HHHHHHHhhhccC---C-ceEEEEECh-HHhhhhhHHHHHHHhCCCCEEEEeCCCCCcHHHHH
Confidence 34554 45666654 8899999876642 2 266666542 11111111 1121111111 122222345667777
Q ss_pred hccccccC-CcEEEEecCCccccc
Q psy736 87 REKNRHKK-TVVCPIIDVISDQTF 109 (304)
Q Consensus 87 n~g~~~A~-gd~l~flD~D~~~~~ 109 (304)
..+..... .+.++++++|.....
T Consensus 89 ~~a~~~l~~~~~~lv~~~D~i~~~ 112 (231)
T cd04183 89 LLAADLIDNDDPLLIFNCDQIVES 112 (231)
T ss_pred HHHHhhcCCCCCEEEEecceeecc
Confidence 77766543 366778999987765
No 148
>COG2452 Predicted site-specific integrase-resolvase [DNA replication, recombination, and repair]
Probab=30.25 E-value=1e+02 Score=25.59 Aligned_cols=52 Identities=13% Similarity=0.170 Sum_probs=30.6
Q ss_pred CCCeEEEEEeeCCChHHH-HHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhh
Q psy736 10 LPTTSIVIVFHNEAWSTL-LRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISD 66 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L-~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~ 66 (304)
.|+++.|+.+|-...... -+.++..++.. ..||++||.+-.|+ .++++.+.+
T Consensus 112 ~~~V~rVvV~ykDRL~RFGfe~le~~~~a~----~~eivvv~~~e~~~-eELveDlis 164 (193)
T COG2452 112 GNSVRRVVVSYKDRLNRFGFELVEAVCKAH----NVEIVVVNQEDKDS-EELVEDLVS 164 (193)
T ss_pred CCceeEEEEEccchHhHHhHHHHHHHHHhc----CcEEEEecCCCCCH-HHHHHHHHH
Confidence 378999999996541211 22344444332 34999999876554 555555443
No 149
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=30.12 E-value=1.1e+02 Score=25.61 Aligned_cols=90 Identities=9% Similarity=0.109 Sum_probs=49.4
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeecccCCCcHHHHHhc
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASDMTWGGFNWKLRE 88 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~~~~~G~~~a~n~ 88 (304)
.|+. .+|.-++ ..|...|.++.+.. . .+|+||=+.-.+. +.+.+... ...++........|.+.++..
T Consensus 19 ~pK~--l~~~~g~--~li~~~l~~l~~~g---i-~~i~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~ 87 (229)
T cd02523 19 RPKC--LLEINGK--PLLERQIETLKEAG---I-DDIVIVTGYKKEQ---IEELLKKYPNIKFVYNPDYAETNNIYSLYL 87 (229)
T ss_pred CCce--eeeECCE--EHHHHHHHHHHHCC---C-ceEEEEeccCHHH---HHHHHhccCCeEEEeCcchhhhCcHHHHHH
Confidence 4665 4454444 58888998877652 2 2777776542222 22222221 112221111113566777777
Q ss_pred cccccCCcEEEEecCCccccccc
Q psy736 89 KNRHKKTVVCPIIDVISDQTFEY 111 (304)
Q Consensus 89 g~~~A~gd~l~flD~D~~~~~~~ 111 (304)
+.... .+.++++++|....++.
T Consensus 88 ~~~~~-~~~~lv~~~D~~~~~~~ 109 (229)
T cd02523 88 ARDFL-DEDFLLLEGDVVFDPSI 109 (229)
T ss_pred HHHHc-CCCEEEEeCCEecCHHH
Confidence 76666 56788899999876533
No 150
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=29.75 E-value=1.1e+02 Score=27.77 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=28.8
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCC
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASE 54 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~ 54 (304)
-++.++|+.++|++...+.++|+++-..-.....+-.|+++|..=
T Consensus 54 r~~Aafv~LvrN~dL~~~l~SI~~lE~rFN~kf~YpwvFlnd~pF 98 (328)
T PF01793_consen 54 RENAAFVMLVRNSDLEGLLSSIRSLEDRFNKKFNYPWVFLNDEPF 98 (328)
T ss_dssp ---EEEEEE--GGGHHHHHHHHHHHHHHTTTTS---EEEEESS--
T ss_pred CCceEEEEEEEchhHHHHHHHHHHHHHHccCCCCCCEEEEeCCCC
Confidence 467999999999988899999999877644445568888888543
No 151
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase. This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.
Probab=29.65 E-value=2.3e+02 Score=23.92 Aligned_cols=91 Identities=8% Similarity=0.038 Sum_probs=47.0
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc---cccceeecccCCCcHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ---TFEYITASDMTWGGFNWK 85 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~---~~~~i~~~~~~~~G~~~a 85 (304)
..|+. .+|.-+. ..|..+|+++.+.. . .+|+||-+...- ..+.+.+... ..+..........|.+.+
T Consensus 20 ~~pK~--llpv~~~--pli~~~l~~l~~~g---i-~~i~vv~~~~~~--~~~~~~l~~~~~~~~~i~~~~~~~~~G~~~a 89 (240)
T cd02538 20 VVSKQ--LLPVYDK--PMIYYPLSTLMLAG---I-REILIISTPEDL--PLFKELLGDGSDLGIRITYAVQPKPGGLAQA 89 (240)
T ss_pred CCCce--eeEECCE--EhHHHHHHHHHHCC---C-CEEEEEeCcchH--HHHHHHHhcccccCceEEEeeCCCCCCHHHH
Confidence 45665 4455555 48888888876542 2 278777543211 1222233211 011111112224577888
Q ss_pred HhccccccCCcEEEEecCCccccc
Q psy736 86 LREKNRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 86 ~n~g~~~A~gd~l~flD~D~~~~~ 109 (304)
+..+......+-++++.+|..+.+
T Consensus 90 l~~a~~~~~~~~~lv~~gD~~~~~ 113 (240)
T cd02538 90 FIIGEEFIGDDPVCLILGDNIFYG 113 (240)
T ss_pred HHHHHHhcCCCCEEEEECCEEEcc
Confidence 877766555555566677765543
No 152
>PF07492 Trehalase_Ca-bi: Neutral trehalase Ca2+ binding domain; InterPro: IPR011120 Neutral trehalases mobilise trehalose accumulated by fungal cells as a protective and storage carbohydrate. This family represents a calcium-binding domain similar to EF hand. Residues 97 and 108 in O42893 from SWISSPROT have been implicated in this interaction. It is thought that this domain may provide a general mechanism for regulating neutral trehalase activity in yeasts and filamentous fungi [].; GO: 0004555 alpha,alpha-trehalase activity, 0005509 calcium ion binding, 0005993 trehalose catabolic process, 0005737 cytoplasm
Probab=27.70 E-value=65 Score=18.07 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=16.5
Q ss_pred HHHHHhcCCCCCcceEEEEeCCCC
Q psy736 31 VWSVINRSPRTLLKEIILVDDASE 54 (304)
Q Consensus 31 l~Sll~qt~~~~~~EIIVVDdgS~ 54 (304)
|++++.|...+-.++|-|-|.|..
T Consensus 1 l~~LL~qEDTDgn~qITIeD~GPK 24 (30)
T PF07492_consen 1 LRSLLEQEDTDGNFQITIEDTGPK 24 (30)
T ss_pred ChhHhhccccCCCcEEEEecCCCe
Confidence 356777765555678888887753
No 153
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity, morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes, such as cell lysis, defective cell wall, and failure of polarized growth and cell separation.
Probab=27.44 E-value=1.5e+02 Score=24.95 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=45.9
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcc-ccceeecccCCCcHHHHHhc
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQT-FEYITASDMTWGGFNWKLRE 88 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~-~~~i~~~~~~~~G~~~a~n~ 88 (304)
.|+. .+|.-+.+ .|..+++++.++. . .+|+||-+...+...+.+....... ...+........|.+.++..
T Consensus 21 ~pK~--llpv~g~p--li~~~l~~l~~~g---~-~~v~iv~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~G~~~al~~ 92 (233)
T cd06425 21 VPKP--LVEFCNKP--MIEHQIEALAKAG---V-KEIILAVNYRPEDMVPFLKEYEKKLGIKITFSIETEPLGTAGPLAL 92 (233)
T ss_pred CCCc--cCeECCcc--hHHHHHHHHHHCC---C-cEEEEEeeeCHHHHHHHHhcccccCCeEEEeccCCCCCccHHHHHH
Confidence 4544 45665654 8899999987753 2 2666665543333222222111111 11111112223576777776
Q ss_pred cccccC---CcEEEEecCCcccc
Q psy736 89 KNRHKK---TVVCPIIDVISDQT 108 (304)
Q Consensus 89 g~~~A~---gd~l~flD~D~~~~ 108 (304)
+....+ .+ ++++++|....
T Consensus 93 a~~~~~~~~~~-~lv~~~D~~~~ 114 (233)
T cd06425 93 ARDLLGDDDEP-FFVLNSDVICD 114 (233)
T ss_pred HHHHhccCCCC-EEEEeCCEeeC
Confidence 655543 35 45668887654
No 154
>KOG2733|consensus
Probab=25.89 E-value=1.4e+02 Score=27.64 Aligned_cols=46 Identities=20% Similarity=0.270 Sum_probs=38.6
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCC
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERV 56 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~ 56 (304)
..+.+|+=|..+|++ .|.+.|+-+-+.+.+++.-++|+|-|.++..
T Consensus 30 ~~~~~slavAGRn~~--KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~ 75 (423)
T KOG2733|consen 30 VFEGLSLAVAGRNEK--KLQEVLEKVGEKTGTDLSSSVILIADSANEA 75 (423)
T ss_pred cccCceEEEecCCHH--HHHHHHHHHhhccCCCcccceEEEecCCCHH
Confidence 467899999999986 8999999988888777777888888876655
No 155
>KOG0679|consensus
Probab=25.73 E-value=18 Score=33.30 Aligned_cols=14 Identities=57% Similarity=1.042 Sum_probs=12.7
Q ss_pred eeeccccccccccc
Q psy736 287 SYSSWFSGSILASC 300 (304)
Q Consensus 287 ~~~~~~~~~~~~~~ 300 (304)
++.+|+-||||||-
T Consensus 386 ~~~~WlGGSILASL 399 (426)
T KOG0679|consen 386 RFQSWLGGSILASL 399 (426)
T ss_pred hhhhhhhhHHHhcc
Confidence 68999999999985
No 156
>TIGR00454 conserved hypothetical protein TIGR00454. At this time this gene appears to be present only in Archea
Probab=25.17 E-value=3.1e+02 Score=22.33 Aligned_cols=80 Identities=9% Similarity=0.018 Sum_probs=45.6
Q ss_pred EEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc-C
Q psy736 16 VIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK-K 94 (304)
Q Consensus 16 IIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A-~ 94 (304)
.++..+. ..|..+++++.+.. . -+|+||-+..++.+...+ .... .........|.+..+..+++.. .
T Consensus 21 Ll~i~Gk--plI~~vi~~l~~~~---i-~~I~Vv~~~~~~~~~~~l---~~~~---~~~~~~~g~G~~~~l~~al~~~~~ 88 (183)
T TIGR00454 21 LIEVCGR--CLIDHVLSPLLKSK---V-NNIIIATSPHTPKTEEYI---NSAY---KDYKNASGKGYIEDLNECIGELYF 88 (183)
T ss_pred EeEECCE--EHHHHHHHHHHhCC---C-CEEEEEeCCCHHHHHHHH---hhcC---cEEEecCCCCHHHHHHHHhhcccC
Confidence 4444454 58899999876532 2 277777654344433322 2211 1112244667777888887642 3
Q ss_pred CcEEEEecCCccc
Q psy736 95 TVVCPIIDVISDQ 107 (304)
Q Consensus 95 gd~l~flD~D~~~ 107 (304)
.+.++++-+|.-.
T Consensus 89 ~~~~lv~~~D~P~ 101 (183)
T TIGR00454 89 SEPFLVVSSDLIN 101 (183)
T ss_pred CCCEEEEeCCcCc
Confidence 5678888888753
No 157
>PF11181 YflT: Heat induced stress protein YflT
Probab=24.51 E-value=1.5e+02 Score=21.69 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=26.4
Q ss_pred EEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeC
Q psy736 16 VIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDD 51 (304)
Q Consensus 16 IIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDd 51 (304)
+|=+|+.. +.+...|+.|.++-|... +|.|+=.
T Consensus 2 ~Igv~~~~-~E~~~~I~~L~~~Gy~~d--dI~Vva~ 34 (103)
T PF11181_consen 2 VIGVYDNE-EEALSAIEELKAQGYSED--DIYVVAK 34 (103)
T ss_pred EEEEECCH-HHHHHHHHHHHHcCCCcc--cEEEEEc
Confidence 46667777 899999999999988754 8888764
No 158
>PF01697 Glyco_transf_92: Glycosyltransferase family 92; InterPro: IPR008166 This entry represents a region approximately 300 residues long that is of unknown function. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues.
Probab=24.19 E-value=2.3e+02 Score=24.58 Aligned_cols=93 Identities=13% Similarity=0.065 Sum_probs=52.0
Q ss_pred eEEEE-Eee-CCC-hHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc-cceeec------------c
Q psy736 13 TSIVI-VFH-NEA-WSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF-EYITAS------------D 76 (304)
Q Consensus 13 vSIII-p~y-N~~-~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~-~~i~~~------------~ 76 (304)
++|++ |.| |+. +..|..-|+--..+ +. --+.+-|+++++.+..+++.+.+... +..... .
T Consensus 3 ~~vCv~pl~~~~~~~~~l~e~ie~~~~~---G~-~~~~~Y~~~~~~~~~~vL~~Y~~~g~v~~~~w~~~~~~~~~~~~~~ 78 (285)
T PF01697_consen 3 FVVCVSPLFGNEDDWLQLIEWIEYHRLL---GV-DHFYFYDNSSSPSVRKVLKEYERSGYVEVIPWPLRPKFPDFPSPFP 78 (285)
T ss_pred EEEEccchhcccccHHHHHHHHHHHHHh---CC-CEEEEEEccCCHHHHHhHHHHhhcCeEEEEEcccccccCCcccchh
Confidence 55666 334 343 13566655554333 12 26888888899998888887766421 111110 0
Q ss_pred cCC-----CcHHHHHhccccc--cCCcEEEEecCCccccc
Q psy736 77 MTW-----GGFNWKLREKNRH--KKTVVCPIIDVISDQTF 109 (304)
Q Consensus 77 ~~~-----~G~~~a~n~g~~~--A~gd~l~flD~D~~~~~ 109 (304)
..+ .|-..+.|.-+-. .+.+|++|+|-|-.+.|
T Consensus 79 ~~~~~~~~~~q~~a~~DCl~r~~~~~~~v~f~DiDE~lvP 118 (285)
T PF01697_consen 79 DPNSSVERRGQIAAYNDCLLRYRYRAKWVAFIDIDEFLVP 118 (285)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhceEEEEeccccEEEe
Confidence 011 1223444444433 45688999999977665
No 159
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=23.10 E-value=1.1e+02 Score=28.16 Aligned_cols=48 Identities=21% Similarity=0.279 Sum_probs=32.6
Q ss_pred CeEEEEEeeCCC-----hHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCC-chHHHH
Q psy736 12 TTSIVIVFHNEA-----WSTLLRTVWSVINRSPRTLLKEIILVDDASERV-VCPIID 62 (304)
Q Consensus 12 ~vSIIIp~yN~~-----~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~-t~~ii~ 62 (304)
.+-|.+.+=++. -..+.+.|+.++++..++ .+|+|-||.+|+ ..++++
T Consensus 66 dveVA~VsG~~~~~v~ad~~I~~qld~vl~~~~~~---~~i~VsDGaeDE~vlPiIq 119 (344)
T PF04123_consen 66 DVEVAVVSGSPDVGVEADRKIAEQLDEVLSKFDPD---SAIVVSDGAEDERVLPIIQ 119 (344)
T ss_pred CeEEEEEECCCCCchhhHHHHHHHHHHHHHhCCCC---EEEEEecChhhhhhhHhhh
Confidence 566666665443 135667788888876653 899999999998 345444
No 160
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=22.95 E-value=3e+02 Score=22.64 Aligned_cols=88 Identities=9% Similarity=0.065 Sum_probs=45.5
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeecccCCCcHHHHHhc
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASDMTWGGFNWKLRE 88 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~~~~~G~~~a~n~ 88 (304)
.||. .+|.. .. ..|..+++.+..... ..+|+||=+..... ....+... ....+..... ..|...++..
T Consensus 18 ~~K~--l~~i~-Gk-pll~~~i~~l~~~~~---~~~ivVv~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~si~~ 86 (218)
T cd02516 18 IPKQ--FLELG-GK-PVLEHTLEAFLAHPA---IDEIVVVVPPDDID---LAKELAKYGLSKVVKIVEG-GATRQDSVLN 86 (218)
T ss_pred CCcc--eeEEC-Ce-EHHHHHHHHHhcCCC---CCEEEEEeChhHHH---HHHHHHhcccCCCeEEECC-chHHHHHHHH
Confidence 3553 44544 44 588999998765321 12777765532222 11121110 1111222221 2344666777
Q ss_pred ccccc---CCcEEEEecCCcccc
Q psy736 89 KNRHK---KTVVCPIIDVISDQT 108 (304)
Q Consensus 89 g~~~A---~gd~l~flD~D~~~~ 108 (304)
|+... ..++++++++|.-+-
T Consensus 87 al~~~~~~~~~~vlv~~~D~P~i 109 (218)
T cd02516 87 GLKALPDADPDIVLIHDAARPFV 109 (218)
T ss_pred HHHhcccCCCCEEEEccCcCCCC
Confidence 77654 578999999996543
No 161
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide. CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.
Probab=22.03 E-value=4e+02 Score=22.32 Aligned_cols=47 Identities=17% Similarity=0.318 Sum_probs=28.2
Q ss_pred cccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEe
Q psy736 174 TMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIP 222 (304)
Q Consensus 174 ~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p 222 (304)
....|+..++++.|+.+-...+. ..+-.+.+++ +++.+.|.++...+
T Consensus 173 ~~~~Giy~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~g~~v~~~~ 219 (239)
T cd02517 173 YKHIGIYAYRRDFLLRFAALPPS-PLEQIESLEQ-LRALENGYKIKVVE 219 (239)
T ss_pred eEEEEEEEECHHHHHHHHhCCCc-hhhhhhhHHH-HHHHHCCCceEEEE
Confidence 45568889999999987543221 1111233344 37788898765543
No 162
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=21.89 E-value=90 Score=30.67 Aligned_cols=23 Identities=26% Similarity=0.367 Sum_probs=17.8
Q ss_pred eEEEEeCCCCCCchHHHHHHhhc
Q psy736 45 EIILVDDASERVVCPIIDVISDQ 67 (304)
Q Consensus 45 EIIVVDdgS~d~t~~ii~~~~~~ 67 (304)
=+++||||||++..+-++.++..
T Consensus 420 L~VlvDnGsTeEDipA~~~~k~Y 442 (715)
T COG1107 420 LLVLVDNGSTEEDIPAIKQLKAY 442 (715)
T ss_pred eEEEEcCCCcccccHHHHHHHhc
Confidence 58899999999977766666554
No 163
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=21.74 E-value=5.8e+02 Score=22.72 Aligned_cols=178 Identities=10% Similarity=0.046 Sum_probs=92.4
Q ss_pred EEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc---cceee-cccCCCcHHHHHhcccc
Q psy736 16 VIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF---EYITA-SDMTWGGFNWKLREKNR 91 (304)
Q Consensus 16 IIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~---~~i~~-~~~~~~G~~~a~n~g~~ 91 (304)
.+|.|+.+ .|.-+|..+...- + .||+||-.- .| .+.+..+-.+.. -.+.. ......|++.|.-.+..
T Consensus 25 LlpV~~KP--mi~y~l~~L~~aG---I-~dI~II~~~-~~--~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~~a~~ 95 (286)
T COG1209 25 LLPVYDKP--MIYYPLETLMLAG---I-RDILIVVGP-ED--KPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVLIAED 95 (286)
T ss_pred cceecCcc--hhHhHHHHHHHcC---C-ceEEEEecC-Cc--hhhhhhhhcCccccCcceEEEecCCCCcHHHHHHHHHh
Confidence 78999987 8999999987654 2 377766542 12 122223322211 11222 22335699999999988
Q ss_pred ccC-CcEEEEecCCccccc---ccc---cc--eeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhc
Q psy736 92 HKK-TVVCPIIDVISDQTF---EYI---TA--KTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRR 162 (304)
Q Consensus 92 ~A~-gd~l~flD~D~~~~~---~~l---~~--~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
... .++++.|. |-++.. +.+ .. .....-....-++..|. -...+-..+...+-
T Consensus 96 fv~~~~f~l~LG-DNi~~~~l~~~~~~~~~~~~ga~i~~~~V~dP~rfG----------V~e~d~~~~v~~l~------- 157 (286)
T COG1209 96 FVGDDDFVLYLG-DNIFQDGLSELLEHFAEEGSGATILLYEVDDPSRYG----------VVEFDEDGKVIGLE------- 157 (286)
T ss_pred hcCCCceEEEec-CceeccChHHHHHHHhccCCCcEEEEEEcCCcccce----------EEEEcCCCcEEEeE-------
Confidence 887 66666664 433332 111 00 00000000011111111 00111000111111
Q ss_pred CCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEec
Q psy736 163 GGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPC 223 (304)
Q Consensus 163 ~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~ 223 (304)
..+..|-..-+++ +..+++.++|+.+-...++=.. -.|=+|.--.+.+.|..+.....
T Consensus 158 -EKP~~P~SNlAvt-GlY~~d~~Vf~~~~~ikPS~RG-ElEITd~i~~~i~~G~~~~~~~~ 215 (286)
T COG1209 158 -EKPKEPKSNLAVT-GLYFYDPSVFEAIKQIKPSARG-ELEITDAIDLYIEKGYLVVAILI 215 (286)
T ss_pred -ECCCCCCCceeEE-EEEEeChHHHHHHHcCCCCCCC-ceEehHHHHHHHHcCcEEEEEEc
Confidence 1223332333333 6777999999999777665432 35888999999999998877654
No 164
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=21.17 E-value=1.9e+02 Score=24.40 Aligned_cols=27 Identities=11% Similarity=-0.041 Sum_probs=15.5
Q ss_pred HHHHhccc-------cccCCcEEEEecCCccccc
Q psy736 83 NWKLREKN-------RHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 83 ~~a~n~g~-------~~A~gd~l~flD~D~~~~~ 109 (304)
...||.|+ .....-++.|.|+|....-
T Consensus 59 ~~qRn~AL~~ir~~~~~~~~GVVyFaDDdNtYdl 92 (207)
T PF03360_consen 59 VHQRNAALRWIRNNANHRLDGVVYFADDDNTYDL 92 (207)
T ss_dssp HHHHHHHHHHHHSTTTSSS-EEEEE--TTSEE-H
T ss_pred HHHHHHHHHHHHhcccCCCCcEEEECCCCCeeeH
Confidence 34667773 3455678899999987665
No 165
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=21.12 E-value=99 Score=22.01 Aligned_cols=58 Identities=10% Similarity=0.128 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 26 TLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 26 ~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
.+.+++.++-+.. ..+++|..|.+..-+.++..-..+....++........|.+-.+.
T Consensus 17 G~kqt~Kai~kg~----~~~v~iA~Da~~~vv~~l~~lceek~Ip~v~V~s~~~LGkAcgi~ 74 (84)
T PRK13600 17 GLKETLKALKKDQ----VTSLIIAEDVEVYLMTRVLSQINQKNIPVSFFKSKHALGKHVGIN 74 (84)
T ss_pred eHHHHHHHHhcCC----ceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHHHHHHhCCC
Confidence 4566777765433 238999999887666655554455555555544333334433333
No 166
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase. Members of this protein family are 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, the IspD protein of the deoxyxylulose pathway of IPP biosynthesis. In about twenty percent of bacterial genomes, this protein occurs as IspDF, a bifunctional fusion protein.
Probab=20.84 E-value=4.2e+02 Score=21.77 Aligned_cols=87 Identities=8% Similarity=0.036 Sum_probs=43.9
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcc
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREK 89 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g 89 (304)
.||. ..+. +.. ..|..+++.+.+... . .+|+||=+..... .+...+... ..+..... ..+...++..|
T Consensus 17 ~~K~--l~~l-~gk-pll~~~l~~l~~~~~--~-~~ivVv~~~~~~~--~~~~~~~~~--~~~~~~~~-~~~~~~sl~~~ 84 (217)
T TIGR00453 17 VPKQ--YLEL-GGR-PLLEHTLDAFLAHPA--I-DEVVVVVSPEDQE--FFQKYLVAR--AVPKIVAG-GDTRQDSVRNG 84 (217)
T ss_pred CCcc--EeEE-CCe-EHHHHHHHHHhcCCC--C-CEEEEEEChHHHH--HHHHHhhcC--CcEEEeCC-CchHHHHHHHH
Confidence 4554 3333 444 588899998765311 2 2777775532111 111111111 01112111 12334566667
Q ss_pred cccc-CCcEEEEecCCcccc
Q psy736 90 NRHK-KTVVCPIIDVISDQT 108 (304)
Q Consensus 90 ~~~A-~gd~l~flD~D~~~~ 108 (304)
+... ..|+++++++|.-+-
T Consensus 85 l~~~~~~d~vlv~~~D~P~i 104 (217)
T TIGR00453 85 LKALKDAEWVLVHDAARPFV 104 (217)
T ss_pred HHhCCCCCEEEEccCccCCC
Confidence 6655 678999999997433
No 167
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=20.44 E-value=1.6e+02 Score=31.17 Aligned_cols=42 Identities=10% Similarity=-0.128 Sum_probs=29.3
Q ss_pred cccceeecccCCCc-----HHHHHhccccc----cCCcEEEEecCCccccc
Q psy736 68 TFEYITASDMTWGG-----FNWKLREKNRH----KKTVVCPIIDVISDQTF 109 (304)
Q Consensus 68 ~~~~i~~~~~~~~G-----~~~a~n~g~~~----A~gd~l~flD~D~~~~~ 109 (304)
.+..+...+++++| ++.|+|.-++. +.+.||+-||.|.....
T Consensus 453 lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nn 503 (1044)
T PLN02915 453 LPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINN 503 (1044)
T ss_pred cceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCc
Confidence 44444444444544 47788887554 58999999999998875
No 168
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional
Probab=20.10 E-value=3.4e+02 Score=25.00 Aligned_cols=75 Identities=15% Similarity=0.031 Sum_probs=41.9
Q ss_pred eCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccCCcEEE
Q psy736 20 HNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKKTVVCP 99 (304)
Q Consensus 20 yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~ 99 (304)
++.. ..|..+++.+... ..+|+|+-+.+... .+......++.. .....|...++..|++++..+.++
T Consensus 197 ~~Gk-~ll~~~l~~l~~~-----~~~vvV~~~~~~~~------~~~~~~v~~i~d-~~~~~Gpl~gi~~al~~~~~~~~l 263 (369)
T PRK14490 197 YHES-NQLVHTAALLRPH-----CQEVFISCRAEQAE------QYRSFGIPLITD-SYLDIGPLGGLLSAQRHHPDAAWL 263 (369)
T ss_pred ECCc-cHHHHHHHHHHhh-----CCEEEEEeCCchhh------HHhhcCCcEEeC-CCCCCCcHHHHHHHHHhCCCCcEE
Confidence 3444 5888888887542 12777766544221 122112223322 122457666777777777777888
Q ss_pred EecCCccc
Q psy736 100 IIDVISDQ 107 (304)
Q Consensus 100 flD~D~~~ 107 (304)
++=+|+-.
T Consensus 264 v~~~DmP~ 271 (369)
T PRK14490 264 VVACDLPF 271 (369)
T ss_pred EEeCCcCC
Confidence 88888643
Done!