Query psy736
Match_columns 304
No_of_seqs 286 out of 2233
Neff 9.0
Searched_HMMs 29240
Date Sat Aug 17 00:45:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy736.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/736hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xhb_A Polypeptide N-acetylgal 100.0 2.7E-48 9.2E-53 367.8 25.7 279 1-279 19-308 (472)
2 2ffu_A Ppgalnact-2, polypeptid 100.0 2E-46 6.7E-51 357.5 25.6 277 1-282 56-343 (501)
3 2d7i_A Polypeptide N-acetylgal 100.0 1E-46 3.5E-51 364.3 23.2 275 1-281 102-388 (570)
4 3bcv_A Putative glycosyltransf 100.0 1.1E-33 3.9E-38 243.3 13.3 206 8-229 2-224 (240)
5 2z86_A Chondroitin synthase; G 100.0 9.1E-31 3.1E-35 255.6 18.3 219 8-233 90-334 (625)
6 4fix_A UDP-galactofuranosyl tr 100.0 7.4E-31 2.5E-35 256.1 16.2 243 8-258 177-445 (657)
7 1qg8_A Protein (spore coat pol 100.0 1.2E-30 4.1E-35 226.5 12.2 189 11-232 1-217 (255)
8 2z86_A Chondroitin synthase; G 100.0 1.5E-27 5.2E-32 232.8 21.3 191 8-229 372-572 (625)
9 2fy7_A Beta-1,4-galactosyltran 100.0 2.2E-28 7.4E-33 216.1 12.3 161 9-231 63-235 (287)
10 2nxv_A ATP synthase subunits r 100.0 6.1E-28 2.1E-32 209.7 13.1 202 8-258 13-224 (249)
11 3l7i_A Teichoic acid biosynthe 99.9 2.1E-29 7.1E-34 250.1 0.0 204 10-230 1-206 (729)
12 4hg6_A Cellulose synthase subu 99.9 3.8E-27 1.3E-31 235.4 14.9 214 8-230 137-369 (802)
13 3ckj_A Putative uncharacterize 99.9 1.6E-26 5.6E-31 208.7 9.9 202 9-228 46-263 (329)
14 3f1y_A Mannosyl-3-phosphoglyce 99.9 8.2E-24 2.8E-28 194.4 11.4 199 10-228 93-308 (387)
15 2bo4_A Mannosylglycerate synth 99.7 1.4E-16 4.7E-21 146.2 10.1 192 14-223 2-211 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 99.6 2.3E-16 7.9E-21 139.2 7.9 94 10-109 52-174 (391)
17 3lw6_A FI08434P, beta-4-galact 99.5 3.4E-13 1.2E-17 115.6 13.7 159 11-231 51-220 (287)
18 2zu9_A Mannosyl-3-phosphoglyce 99.4 6.6E-13 2.2E-17 120.3 9.8 90 11-106 51-172 (394)
19 1fo8_A Alpha-1,3-mannosyl-glyc 99.3 3.8E-12 1.3E-16 114.3 9.3 100 10-112 1-117 (343)
20 2c0n_A A197; thermophil protei 97.5 0.00011 3.7E-09 59.6 4.6 48 171-218 112-165 (203)
21 3cu0_A Galactosylgalactosylxyl 91.4 1.1 3.9E-05 38.1 9.2 93 8-109 18-147 (281)
22 1omz_A Alpha-1,4-N-acetylhexos 89.7 1.2 4.2E-05 38.4 8.1 97 10-112 27-124 (293)
23 2d0j_A Galactosylgalactosylxyl 88.6 3 0.0001 35.0 9.4 94 9-109 1-115 (246)
24 1v84_A Galactosylgalactosylxyl 86.0 3.9 0.00013 34.4 8.7 91 10-109 2-121 (253)
25 3tzt_A Glycosyl transferase fa 69.9 19 0.00064 30.5 8.3 55 11-66 4-58 (276)
26 4fcu_A 3-deoxy-manno-octuloson 53.7 79 0.0027 26.1 9.2 44 175-222 181-226 (253)
27 1h7e_A 3-deoxy-manno-octuloson 53.6 83 0.0028 25.3 9.3 74 25-107 28-101 (245)
28 1g9r_A Glycosyl transferase; a 53.1 20 0.00067 30.9 5.5 40 25-66 13-53 (311)
29 2y6p_A 3-deoxy-manno-octuloson 46.6 61 0.0021 25.9 7.3 73 25-109 28-101 (234)
30 1e5k_A Molybdopterin-guanine d 45.7 39 0.0013 26.7 5.8 69 25-106 34-103 (201)
31 1qwj_A Cytidine monophospho-N- 44.0 92 0.0031 24.9 8.0 75 25-107 29-107 (229)
32 4ecm_A Glucose-1-phosphate thy 36.5 61 0.0021 26.8 5.8 78 25-108 56-136 (269)
33 3ngw_A Molybdopterin-guanine d 36.0 83 0.0028 25.1 6.4 72 21-108 24-96 (208)
34 2wee_A MOBA-related protein; u 35.7 1.1E+02 0.0038 23.4 7.0 75 25-107 32-108 (197)
35 2waw_A MOBA relate protein; un 35.2 45 0.0015 25.8 4.6 75 25-107 32-108 (199)
36 1w55_A ISPD/ISPF bifunctional 34.8 1.3E+02 0.0045 26.5 7.9 70 25-107 32-101 (371)
37 3tqd_A 3-deoxy-manno-octuloson 34.8 1.3E+02 0.0045 24.8 7.6 44 175-222 189-234 (256)
38 2e8b_A Probable molybdopterin- 33.1 1.5E+02 0.005 23.1 7.4 29 79-107 81-109 (201)
39 3oam_A 3-deoxy-manno-octuloson 31.7 1.4E+02 0.0048 24.3 7.3 47 174-222 179-225 (252)
40 1ll2_A Glycogenin-1; protein-s 28.6 1.6E+02 0.0055 25.4 7.4 20 90-109 90-109 (333)
41 1ezi_A CMP-N-acetylneuraminic 28.5 70 0.0024 25.5 4.8 75 25-107 30-109 (228)
42 4fce_A Bifunctional protein GL 27.5 3.2E+02 0.011 24.1 13.1 73 25-106 37-110 (459)
43 1s4n_A Glycolipid 2-alpha-mann 26.1 96 0.0033 27.2 5.3 47 10-56 26-72 (348)
44 3k8d_A 3-deoxy-manno-octuloson 24.4 2.2E+02 0.0075 23.5 7.2 46 175-222 196-241 (264)
45 3rsb_A Adenosylcobinamide-phos 24.0 46 0.0016 25.8 2.7 75 25-107 28-104 (196)
46 1xkn_A Putative peptidyl-argin 23.6 76 0.0026 28.0 4.2 32 14-50 295-326 (355)
47 3juk_A UDP-glucose pyrophospho 23.5 98 0.0034 25.6 4.9 32 79-110 105-136 (281)
48 1t6t_1 Putative protein; struc 23.4 49 0.0017 24.2 2.5 24 25-52 6-29 (118)
49 1vgw_A 4-diphosphocytidyl-2C-m 22.1 2.5E+02 0.0086 22.0 7.0 75 25-107 35-116 (231)
50 3u2u_A Glycogenin-1, GN-1, GN1 21.9 1.6E+02 0.0055 24.5 5.9 20 90-109 91-110 (263)
51 3h4x_A Phosphatidylinositol-sp 21.3 3.3E+02 0.011 23.6 7.6 87 25-112 102-204 (339)
52 3st8_A Bifunctional protein GL 20.9 1.8E+02 0.0062 26.5 6.5 86 16-107 34-123 (501)
53 4fak_A Ribosomal RNA large sub 20.2 3E+02 0.01 21.1 7.0 45 9-54 3-47 (163)
No 1
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=100.00 E-value=2.7e-48 Score=367.76 Aligned_cols=279 Identities=58% Similarity=1.030 Sum_probs=221.1
Q ss_pred CCCCCCCCCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCC-chHHHHHHhhccccceeecc-cC
Q psy736 1 CKKKSYPTFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERV-VCPIIDVISDQTFEYITASD-MT 78 (304)
Q Consensus 1 ~~~~~y~~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~-t~~ii~~~~~~~~~~i~~~~-~~ 78 (304)
|+.++|++.+|+||||||+||++++.|.+||+|+++|++++..+|||||||||+|+ |.++++.+.+.....++.+. ..
T Consensus 19 c~~~~~~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~ 98 (472)
T 1xhb_A 19 CKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQ 98 (472)
T ss_dssp GGTCCCCSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSS
T ss_pred hccCcCCcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 88899999999999999999997689999999999999876557999999999995 99999888665442333333 34
Q ss_pred CCcHHHHHhccccccCCcEEEEecCCcccccccc---------cceeeeeceeeeeCCCceeeeccCCceecccccCCCc
Q psy736 79 WGGFNWKLREKNRHKKTVVCPIIDVISDQTFEYI---------TAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNF 149 (304)
Q Consensus 79 ~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l---------~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 149 (304)
|.|+++|+|.|+++|+||||+|||+|+++.|++| ....++.|.+..++.+.+.+........+++.|...+
T Consensus 99 n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (472)
T 1xhb_A 99 RSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNF 178 (472)
T ss_dssp CCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCE
T ss_pred CCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeecccee
Confidence 7899999999999999999999999999999776 3345566777777777776655444556777777777
Q ss_pred ccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 150 RWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
.+...+.............+...+.+.|++++++|++|+++|||||+|.+||+||+||++|++++|+++.++|++.|.|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 258 (472)
T 1xhb_A 179 RWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 258 (472)
T ss_dssp EEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEE
T ss_pred ecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEE
Confidence 66666554443333344557778889999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccCCCCchHHHHHHHHHHHHhhhhhhHHHHHhhCcCCccccccc
Q psy736 230 FRDKSPYTFPGGVSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVSTC 279 (304)
Q Consensus 230 ~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~~~~~~~~~~~~~~~ 279 (304)
++.+.++..+.+....+.+|..|++++|+|+|+++||..+|++.....+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p~~~~~~~g~ 308 (472)
T 1xhb_A 259 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGD 308 (472)
T ss_dssp C------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTGGGSCCCC
T ss_pred ccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCCC
Confidence 99988887665544567899999999999999999999999876544443
No 2
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=100.00 E-value=2e-46 Score=357.54 Aligned_cols=277 Identities=45% Similarity=0.794 Sum_probs=224.9
Q ss_pred CCCCCCCCCCCCeEEEEEeeCCChH-HHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecc-cC
Q psy736 1 CKKKSYPTFLPTTSIVIVFHNEAWS-TLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASD-MT 78 (304)
Q Consensus 1 ~~~~~y~~~~p~vSIIIp~yN~~~~-~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~-~~ 78 (304)
|+.++|++.+|+||||||+||++ + .|.+||+|+++|++++..+|||||||||+|+|.. .+.+... .++.+. ..
T Consensus 56 ~~~~~~~~~~p~vSVIIp~yN~~-~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~---~~~~~~~-~v~vi~~~~ 130 (501)
T 2ffu_A 56 CQRKQWRVDLPATSVVITFHNEA-RSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDG---ALLGKIE-KVRVLRNDR 130 (501)
T ss_dssp GGGCCCCSSCCCEEEEEEESSCC-HHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHH---HGGGGBT-TEEEEECSS
T ss_pred hccccCCcCCCCEEEEEEeCcCc-HHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHH---HHHhcCC-CEEEEECCC
Confidence 77788999999999999999998 7 9999999999999876557999999999999743 2222222 233333 45
Q ss_pred CCcHHHHHhccccccCCcEEEEecCCcccccccc---------cceeeeeceeeeeCCCceeeeccCCceecccccCCCc
Q psy736 79 WGGFNWKLREKNRHKKTVVCPIIDVISDQTFEYI---------TAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNF 149 (304)
Q Consensus 79 ~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l---------~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ 149 (304)
|.|+++|+|.|+++|+||||+|||+|++++|++| ....++.|.+..++.+.+.+.+......+++.|...+
T Consensus 131 n~G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (501)
T 2ffu_A 131 REGLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVF 210 (501)
T ss_dssp CCHHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCE
T ss_pred CcCHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCC
Confidence 7899999999999999999999999999999776 3345777877777777776665544556777777766
Q ss_pred ccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 150 RWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
.+...+.............+...+.+.|++++++|++|+++|||||.+..||+||+||++|++++|+++.++|++.|.|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~ 290 (501)
T 2ffu_A 211 KWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHV 290 (501)
T ss_dssp EEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEEC
T ss_pred ccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEE
Confidence 66555554333322244556677888999999999999999999999999989999999999999999999999999999
Q ss_pred ccCCCCccCCCCchHHHHHHHHHHHHhhhhhhHHHHHhhCcCCcccccccccc
Q psy736 230 FRDKSPYTFPGGVSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVSTCAAH 282 (304)
Q Consensus 230 ~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~~~~~~~~~~~~~~~~~~ 282 (304)
+|.+.++..+.+......+|..|++++|+|+|+++||..+|.+.....+.+..
T Consensus 291 ~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~~p~~~~~~~g~~~~ 343 (501)
T 2ffu_A 291 FRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQS 343 (501)
T ss_dssp CCSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHHCGGGGGCCCCCCHH
T ss_pred ccCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCccchHH
Confidence 99998988776655566899999999999999999999999876554444433
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=100.00 E-value=1e-46 Score=364.30 Aligned_cols=275 Identities=41% Similarity=0.773 Sum_probs=220.3
Q ss_pred CCCCCCCCCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCc-hHHHHHHhhccccceeecc-cC
Q psy736 1 CKKKSYPTFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVV-CPIIDVISDQTFEYITASD-MT 78 (304)
Q Consensus 1 ~~~~~y~~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t-~~ii~~~~~~~~~~i~~~~-~~ 78 (304)
|+.+.|++.+|+||||||+||++++.|.+||+|+++|++++..+|||||||||+|+| .++++.+.+... .++.+. ..
T Consensus 102 ~~~~~~~~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~-~v~vi~~~~ 180 (570)
T 2d7i_A 102 CNSKRYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP-SVRILRTKK 180 (570)
T ss_dssp GGTCCEESSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST-TEEEEECSS
T ss_pred ceecccCCCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC-eEEEEECCC
Confidence 677889999999999999999966899999999999998765679999999999999 888888765543 344433 34
Q ss_pred CCcHHHHHhccccccCCcEEEEecCCcccccccc---------cceeeeeceeeeeCCCceeeecc-CCceecccccCCC
Q psy736 79 WGGFNWKLREKNRHKKTVVCPIIDVISDQTFEYI---------TAKTVVCPIIDVISDQTFEYITA-SDMTWGGFNWKLN 148 (304)
Q Consensus 79 ~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l---------~~~~~~~~~i~~i~~~~~~~~~~-~~~~~~~~~~~~~ 148 (304)
|.|+++|+|.|+++|+||||+|||+|+++.|++| +...++.|.+..++...+.+... .....+++.|.+.
T Consensus 181 n~G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (570)
T 2d7i_A 181 REGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMY 260 (570)
T ss_dssp CCCHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCC
T ss_pred CCCHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCccccccccccc
Confidence 7899999999999999999999999999999777 34456677776777666655442 2334556666655
Q ss_pred cccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEe
Q psy736 149 FRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGH 228 (304)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 228 (304)
+.+....... .......+..++.+.|+++++||++|+++|||||+|..||+||+||++|++++|+++.++|.+.|.|
T Consensus 261 ~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H 337 (570)
T 2d7i_A 261 YKRIPIPPEL---QKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGH 337 (570)
T ss_dssp EEEECCCTTT---CCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ccccccchhh---hccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEE
Confidence 5443322210 0012345667788899999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCccCCCCchHHHHHHHHHHHHhhhhhhHHHHHhhCcCCccccccccc
Q psy736 229 VFRDKSPYTFPGGVSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVSTCAA 281 (304)
Q Consensus 229 ~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~~~~~~~~~~~~~~~~~ 281 (304)
.+|.+.+++.+.. ..+.+|..|++++|+++++.+||..+|.+..+..+.+.
T Consensus 338 ~~r~~~~~~~~~~--~~~~~n~~r~~~~W~d~~~~~~y~~~p~~~~~~~g~~~ 388 (570)
T 2d7i_A 338 IYRKYVPYKVPAG--VSLARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVA 388 (570)
T ss_dssp CCCSSCCSCCCSS--CCHHHHHHHHHHHHCGGGHHHHHTTCGGGTTSCCCCCH
T ss_pred EccccCCCCCCch--hhhHHHHHHHHHHHHHHHHHHHHhcCcccccCCccchH
Confidence 9998877766543 34689999999999999999999999977665555443
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=100.00 E-value=1.1e-33 Score=243.29 Aligned_cols=206 Identities=15% Similarity=0.108 Sum_probs=134.8
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
+.+|+||||||+||++ +.|.+||+|+++|++++ +|||||||||+|+|.++++.+.+...+ ++.+..+|.|++.++|
T Consensus 2 ~~~p~vsViIp~yn~~-~~l~~~l~Sl~~q~~~~--~eiIvvDd~S~d~t~~~~~~~~~~~~~-i~~i~~~n~G~~~a~N 77 (240)
T 3bcv_A 2 SLIPKVSVIVPIYNVE-KYLDQCVQALLAQTLSD--IEIILIDDESPDNCPKICDDYAAQYPN-IKVIHKKNAGLGMACN 77 (240)
T ss_dssp -CCCSEEEEEEESSCT-TTHHHHHHHHHTCSSSS--EEEEEEECCCSSSHHHHHHHHHHHCSS-EEEEECCCCCHHHHHH
T ss_pred CCCCcEEEEEecCCCH-HHHHHHHHHHHhCcCCC--eEEEEEECCCCcCHHHHHHHHHhhCCC-EEEEECCCCChHHHHH
Confidence 3579999999999999 99999999999999874 499999999999999999888765433 3444456899999999
Q ss_pred ccccccCCcEEEEecCCccccccccc---------ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhh
Q psy736 88 EKNRHKKTVVCPIIDVISDQTFEYIT---------AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPRE 158 (304)
Q Consensus 88 ~g~~~A~gd~l~flD~D~~~~~~~l~---------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
.|++.|+||||+|||+|+.+.|++|. ...++......+..+. .. .+..... ...........
T Consensus 78 ~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-----~~---~~~~~~~-~~~~~~~~~~~ 148 (240)
T 3bcv_A 78 SGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAG-----IP---TGTVTHQ-KEFKLYKNKNE 148 (240)
T ss_dssp HHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-----------------------------CEEECSHHH
T ss_pred HHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCC-----cc---ccccccc-cccccccCHHH
Confidence 99999999999999999999997761 1112211111111100 00 0000000 00000000000
Q ss_pred ---hhhcCCCCCCcc----ccccccceeeeEehHHHhHhC-CCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 159 ---MMRRGGDRSSPL----RTPTMAGGLFAIDKDYFYELG-SYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 159 ---~~~~~~~~~~~~----~~~~~~G~~~~irr~~f~~iG-GFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
.... .....+. ....++|+++++||++|+++| ||||.++.+ +||+||++|++++|+++.++|.+ ++|+
T Consensus 149 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~-~eD~~~~~r~~~~g~~i~~~~~~-~~~y 224 (240)
T 3bcv_A 149 IHTLLKD-LIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILP-SEDLIFNVDVLANSNIVCVLPQT-FYNY 224 (240)
T ss_dssp HHHHHGG-GTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCT-THHHHHHHHHHTTCSCEEECC-------
T ss_pred HHHHHHH-HhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCcc-CCCHHHHHHHHHhCCEEEEECCC-eEEE
Confidence 0000 0000000 112245788999999999999 999997654 69999999999999999999988 4443
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.97 E-value=9.1e-31 Score=255.63 Aligned_cols=219 Identities=19% Similarity=0.222 Sum_probs=147.4
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcc-ccceeecccCCCcHHHHH
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQT-FEYITASDMTWGGFNWKL 86 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~-~~~i~~~~~~~~G~~~a~ 86 (304)
..+|+||||||+||++ +.|.+||+|+++|+++. .+|||||||||+|+|.++++.+.... ..++.. ...+.|++.++
T Consensus 90 ~~~p~vsviIp~~n~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~-~~~~~g~~~a~ 166 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVREFESLLNIKYVRQ-KDYGYQLCAVR 166 (625)
T ss_dssp CCCCCEEEEEEESSCH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEE-CCCSCCHHHHH
T ss_pred ccCCcEEEEEecCCcH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEe-CCCCcchhHHH
Confidence 4568999999999998 99999999999997653 56999999999999998888775432 222222 22234699999
Q ss_pred hccccccCCcEEEEecCCcccccccc---------cce-eeeeceeeeeCCCceeeec---c------CC------ceec
Q psy736 87 REKNRHKKTVVCPIIDVISDQTFEYI---------TAK-TVVCPIIDVISDQTFEYIT---A------SD------MTWG 141 (304)
Q Consensus 87 n~g~~~A~gd~l~flD~D~~~~~~~l---------~~~-~~~~~~i~~i~~~~~~~~~---~------~~------~~~~ 141 (304)
|.|++.|+||||+|+|+|+.+.|++| +.. .++.+.. ........... . .. ...+
T Consensus 167 N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (625)
T 2z86_A 167 NLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRK-YIDTSKHTYLDFLSQKSLINEIPEIITNNQVAG 245 (625)
T ss_dssp HHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEE-EECCTTCCHHHHHHSTTGGGTSCC---------
T ss_pred HHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeee-eccCcccchhhcccchHHhhhcchhccCCchhh
Confidence 99999999999999999999999766 111 2222221 11111100000 0 00 0000
Q ss_pred ccccCCCcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEE
Q psy736 142 GFNWKLNFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEII 221 (304)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~ 221 (304)
.........+. ...................+.|+++++||++|+++|||||.+..||+||+||++|++++|+++.++
T Consensus 246 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~ 322 (625)
T 2z86_A 246 KVEQNKSVDWR---IEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSV 322 (625)
T ss_dssp ------CCCTH---HHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEEC
T ss_pred hhccCCccccc---hhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEc
Confidence 00000000000 000000001111222345678999999999999999999999999899999999999999999999
Q ss_pred eccEEEeeccCC
Q psy736 222 PCSHVGHVFRDK 233 (304)
Q Consensus 222 p~~~v~H~~r~~ 233 (304)
|++.+.|..+.+
T Consensus 323 p~~~v~H~~~~~ 334 (625)
T 2z86_A 323 EGAMAYHQEPPG 334 (625)
T ss_dssp GGGCEEEECCC-
T ss_pred ccchhhccCCcc
Confidence 999999987654
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.97 E-value=7.4e-31 Score=256.11 Aligned_cols=243 Identities=12% Similarity=0.012 Sum_probs=153.0
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCC-CCcceEEEEeCCCCCC--chHHHHHHhhccccceeecccCCCcHHH
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPR-TLLKEIILVDDASERV--VCPIIDVISDQTFEYITASDMTWGGFNW 84 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~-~~~~EIIVVDdgS~d~--t~~ii~~~~~~~~~~i~~~~~~~~G~~~ 84 (304)
...|+||||||+||++ +.|.+||+||++|++. +..+|||||||||+|+ +..+.+.+... ...++.+..+|.|++.
T Consensus 177 ~~~pkVSVVIptYN~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~-~~~I~vI~~~N~G~a~ 254 (657)
T 4fix_A 177 PGTANIAVGIPTFNRP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARL-GSRLSIHDQPNLGGSG 254 (657)
T ss_dssp CSCCCEEEECCBSSCH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHH-GGGEEEEECCCCHHHH
T ss_pred CCCCeEEEEEEecCCH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhc-CCCEEEEECCCCCHHH
Confidence 3458999999999998 9999999999999861 1245999999999985 33333333322 2234445555999999
Q ss_pred HHhccccccC----CcEEEEecCCcccccccc---------c-ceeeeeceeeeeCCCceee-eccCCceecccccCC--
Q psy736 85 KLREKNRHKK----TVVCPIIDVISDQTFEYI---------T-AKTVVCPIIDVISDQTFEY-ITASDMTWGGFNWKL-- 147 (304)
Q Consensus 85 a~n~g~~~A~----gd~l~flD~D~~~~~~~l---------~-~~~~~~~~i~~i~~~~~~~-~~~~~~~~~~~~~~~-- 147 (304)
++|.|++.|. +|||+|||+|+++.|++| . ...++.+.+...+...... .+.. ...+++.+..
T Consensus 255 a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~-~~~~~~~~~~~~ 333 (657)
T 4fix_A 255 GYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEV-VDRSIFMWTAAP 333 (657)
T ss_dssp HHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEE-EETTTTEEEECT
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccE-eccccccccccc
Confidence 9999999884 589999999999999766 1 2234444332222221111 0100 0000100000
Q ss_pred ------CcccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEE
Q psy736 148 ------NFRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEII 221 (304)
Q Consensus 148 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~ 221 (304)
.+....+....... ........+....|+++++||++|+++||||+ ++++ +||+|||+|+.++|++++++
T Consensus 334 ~~~~~~~f~~~~l~~~~~~~--~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~-~F~~-~ED~Dl~lR~~~~G~ki~~~ 409 (657)
T 4fix_A 334 HAEYDHDFAEYPLNDNNSRS--KLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP-LFIK-WDDADYGLRAAEHGYPTVTL 409 (657)
T ss_dssp TCCSCEETTTSCSSCSSHHH--HGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS-CSSS-SHHHHHHHHHHHTTCCEEEE
T ss_pred cccccccccccccccccccc--cccccceeccccchhHhHhhHHHHHHhCCChh-Hhcc-CcHHHHHHHHHHcCCeEEEE
Confidence 00000000000000 00011234567789999999999999999995 6665 59999999999999999999
Q ss_pred eccEEEeeccCCCCccCCCCchHHHHHHHHHHHHhhh
Q psy736 222 PCSHVGHVFRDKSPYTFPGGVSKIVLHNAARVAEVWM 258 (304)
Q Consensus 222 p~~~v~H~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~ 258 (304)
|++.|+|......... .........||...+..++.
T Consensus 410 p~a~V~H~~~~~~~~~-s~~r~Yy~~RN~l~~~~k~~ 445 (657)
T 4fix_A 410 PGAAIWHMAWSDKDDA-IDWQAYFHLRNRLVVAAMHW 445 (657)
T ss_dssp EEEEEEECCSSSSCCT-TSTHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEcCcCccccc-cHHHHHHHHHHHHHHHHHhC
Confidence 9999999543322111 11233456678777766543
No 7
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.97 E-value=1.2e-30 Score=226.49 Aligned_cols=189 Identities=8% Similarity=0.015 Sum_probs=135.5
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeeccc---------CCCc
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDM---------TWGG 81 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~---------~~~G 81 (304)
|+||||||+||++ +.|.+||+|+++|++++ +|||||||||+|+|.++++.+.. ...++.+.. .|.|
T Consensus 1 p~vSViIp~yn~~-~~l~~~l~Sl~~q~~~~--~eiivvDd~S~d~t~~~~~~~~~--~~~i~~i~~~~~~~~~~~~n~G 75 (255)
T 1qg8_A 1 PKVSVIMTSYNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPFLN--DNRVRFYQSDISGVKERTEKTR 75 (255)
T ss_dssp CCEEEEEEESSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGGGG--STTEEEEECCCCSHHHHHSSCH
T ss_pred CeEEEEEEcCCCH-HHHHHHHHHHHhccCCc--eEEEEEECCCCchHHHHHHHHhh--cCCEEEEecccccccccccccC
Confidence 7899999999999 99999999999999874 49999999999999998887754 222333333 4889
Q ss_pred HHHHHhccccccCCcEEEEecCCcccccccc---------c-ceeeeeceeeee--CCCceeeeccCCceecccccCCCc
Q psy736 82 FNWKLREKNRHKKTVVCPIIDVISDQTFEYI---------T-AKTVVCPIIDVI--SDQTFEYITASDMTWGGFNWKLNF 149 (304)
Q Consensus 82 ~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l---------~-~~~~~~~~i~~i--~~~~~~~~~~~~~~~~~~~~~~~~ 149 (304)
++.++|.|++.|+||||+|+|+|+.+.|++| . ...++.+..... +..... .. ..
T Consensus 76 ~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~-~~------ 141 (255)
T 1qg8_A 76 YAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDI-------VK-ET------ 141 (255)
T ss_dssp HHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CE-------EE-EE------
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcc-------hh-hc------
Confidence 9999999999999999999999999999666 1 112233322211 111000 00 00
Q ss_pred ccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhC-CC------CCCCcccccccHHHHHHHHHcCCeEEEEe
Q psy736 150 RWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELG-SY------DEGMDIWGGENLEMSFRVWQCGGILEIIP 222 (304)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iG-GF------De~~~~~g~ED~dl~~R~~~~G~~i~~~p 222 (304)
. .+.. .........+.|+++++||++|+++| || |+.+ +.+||+||++|+.+.| ++.++|
T Consensus 142 --~-~~~~--------~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~--~~~eD~~~~~r~~~~g-~~~~~~ 207 (255)
T 1qg8_A 142 --V-RPAA--------QVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAF--YRIGDARFFWRVNHFY-PFYPLD 207 (255)
T ss_dssp --E-ECCC--------SCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGG--STTHHHHHHHHHTTTC-CBEEEE
T ss_pred --c-CchH--------HHHHhhcCCCccceEEEEHHHHHhhcccccccccCCccc--chHHHHHHHHHHHHhC-CEEEec
Confidence 0 0000 00001223456788999999999999 89 6665 3579999999999987 799999
Q ss_pred ccEEEeeccC
Q psy736 223 CSHVGHVFRD 232 (304)
Q Consensus 223 ~~~v~H~~r~ 232 (304)
...+.|..+.
T Consensus 208 ~~~~~~r~~~ 217 (255)
T 1qg8_A 208 EELDLNYITD 217 (255)
T ss_dssp EEEEEEEEC-
T ss_pred CcEEEEEEcC
Confidence 9888776543
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.95 E-value=1.5e-27 Score=232.83 Aligned_cols=191 Identities=15% Similarity=0.133 Sum_probs=138.9
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
..+|+||||||+||++ +.|.+||+|+++|++++. |||||||||+|+|.++++.+..... .++.+...|.|++.++|
T Consensus 372 ~~~~~vsiii~~yn~~-~~l~~~l~s~~~q~~~~~--eiivvdd~S~d~t~~~~~~~~~~~~-~i~~~~~~n~G~~~a~n 447 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCS-KYIVRCVESALNQTITDL--EVCICDDGSTDDTLRILQEHYANHP-RVRFISQKNKGIGSASN 447 (625)
T ss_dssp CSSCSEEEEEEESSCT-TTHHHHHHHHHSSSCCSE--EEEEEEESCSSSHHHHHHHHHTTCT-TEEEEEECCCCHHHHHH
T ss_pred ccCCeEEEEEeCCCCH-HHHHHHHHHHHhCcCCCe--EEEEEECcCChhHHHHHHHHHhhCC-cEEEEeCCCCCHHHHHH
Confidence 3468999999999999 999999999999998754 9999999999999999888755432 23334456899999999
Q ss_pred ccccccCCcEEEEecCCccccccccc----------ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChh
Q psy736 88 EKNRHKKTVVCPIIDVISDQTFEYIT----------AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPR 157 (304)
Q Consensus 88 ~g~~~A~gd~l~flD~D~~~~~~~l~----------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
.|++.|+|||++|||+|+.+.|++|. ...++.+....++.+... ...+..+. .....
T Consensus 448 ~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~------~~~~~ 514 (625)
T 2z86_A 448 TAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNL-------ISNGYNWP------IYSRE 514 (625)
T ss_dssp HHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCE-------EEECCCCS------SCCHH
T ss_pred HHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCE-------eccCcccc------cCCHH
Confidence 99999999999999999999997761 011222211111111100 00011100 01111
Q ss_pred hhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEee
Q psy736 158 EMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHV 229 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~ 229 (304)
. .....+.|++++++|++|+++|||||.+. ++||+||++|+.+.| ++.++|...+.|.
T Consensus 515 ~-----------~~~~~~~~~~~~~~r~~~~~~ggfd~~~~--~~eD~dl~~r~~~~g-~~~~~~~~~~~~r 572 (625)
T 2z86_A 515 K-----------LTSAMICHHFRMFTARAWNLTEGFNESIS--NAVDYDMYLKLSEVG-PFKHINKICYNRV 572 (625)
T ss_dssp H-----------HTTSCCCCSCEEEEHHHHTTTTCCCSSCS--SCHHHHHHHHHTTTS-CEEEEEEEEEEEE
T ss_pred H-----------HhhcccCCceEEEEHHHHHHhCCCCCccC--ChHHHHHHHHHHHhC-CEEEeCCcEEEEE
Confidence 0 01223557788999999999999999987 369999999999999 9999998766544
No 9
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.95 E-value=2.2e-28 Score=216.14 Aligned_cols=161 Identities=19% Similarity=0.189 Sum_probs=115.5
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHH---hcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVI---NRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWK 85 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll---~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a 85 (304)
..|+||||||+||++ +.|.+||+|++ +|++. .+|||||||+ +|++ -+.+.+
T Consensus 63 ~~~~VSIIIP~yN~~-~~L~~~L~sl~~~l~q~~~--~~EIiVVdds-~d~~----------------------f~~a~a 116 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQ-EHLKYWLYYLHPVLQRQQL--DYGIYVINQA-GDTI----------------------FNRAKL 116 (287)
T ss_dssp CSCEEEEEEEESSCH-HHHHHHHHHHHHHHHHTTC--EEEEEEEEEC-SSSC----------------------CCHHHH
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHHHHHhcC--CceEEEEEeC-CCCc----------------------cchhhh
Confidence 468999999999999 99999999998 67775 4599999994 4431 134788
Q ss_pred Hhccc----cccCCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhh
Q psy736 86 LREKN----RHKKTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMR 161 (304)
Q Consensus 86 ~n~g~----~~A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
+|.|+ +.|+||||+|+|+|+++.++.+. ..++ .. -... ......+. +
T Consensus 117 ~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~---~~~~------~~-p~~~---~~~~~~~~----~------------ 167 (287)
T 2fy7_A 117 LNVGFQEALKDYDYTCFVFSDVDLIPMNDHNA---YRCF------SQ-PRHI---SVAMDKFG----F------------ 167 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEEECTTEEESBTTSC---CSCC------SS-CEEC---CCEEGGGT----T------------
T ss_pred hhhHHHHHHHhCCCCEEEEECCCcccCCCcce---EecC------CC-CceE---EEeecccc----c------------
Confidence 99998 89999999999999999886531 0000 00 0000 00000000 0
Q ss_pred cCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEE-----EEeccEEEeecc
Q psy736 162 RGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILE-----IIPCSHVGHVFR 231 (304)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~-----~~p~~~v~H~~r 231 (304)
..+ ...+.|++++++|+.|+++|||||.|..||+||+||++|+.++|+++. +.+.+.+.|...
T Consensus 168 -----~~~--~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~ 235 (287)
T 2fy7_A 168 -----SLP--YVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRD 235 (287)
T ss_dssp -----SCS--STTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC----
T ss_pred -----CCC--cCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCC
Confidence 011 134568999999999999999999999999999999999999999998 455555666553
No 10
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.95 E-value=6.1e-28 Score=209.68 Aligned_cols=202 Identities=11% Similarity=-0.063 Sum_probs=126.7
Q ss_pred CCCCCeEEEEEeeCCChHHHHHHHHHHHhcCC-CCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHH
Q psy736 8 TFLPTTSIVIVFHNEAWSTLLRTVWSVINRSP-RTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKL 86 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~-~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~ 86 (304)
+..|.+||| |+||++ +.|.+||+|+.+... +.. +|||||||+|+|. .|++.|+
T Consensus 13 ~~~~~iSII-~~yN~~-~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~-----------------------~g~a~a~ 66 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQ-AKYDRLLESFERFGFTPDK-AEFLAADNREGNQ-----------------------FHGFSWH 66 (249)
T ss_dssp CCCCSEEEE-EEESCH-HHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS-----------------------CCTTTHH
T ss_pred CCcceEEEE-EeeCCH-HHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc-----------------------ccHHHHH
Confidence 345789975 679998 999999998765321 212 6999999999873 2568899
Q ss_pred hccccccCCcEEEEecCCcccccccccce--eeee-----ceeeeeCCCceeee--ccCCceecccccCCCcccccCChh
Q psy736 87 REKNRHKKTVVCPIIDVISDQTFEYITAK--TVVC-----PIIDVISDQTFEYI--TASDMTWGGFNWKLNFRWYRVPPR 157 (304)
Q Consensus 87 n~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~~~-----~~i~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
|.|+++|+||||+|||+|+.+++++|... .+.. |.+..++....... +... ..... . ...+..
T Consensus 67 N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~~~------~-~~~~~~ 138 (249)
T 2nxv_A 67 KQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQAL------H-ISDVFG 138 (249)
T ss_dssp HHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCCEE------E-EEETTE
T ss_pred HHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eeccc------c-cCCccc
Confidence 99999999999999999999988776100 0000 11111111000000 0000 00000 0 000000
Q ss_pred hhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeeccCCCCcc
Q psy736 158 EMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVFRDKSPYT 237 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~r~~~~~~ 237 (304)
..... ...+..++.+.|++|++||++ +|||||.+..|..||+|||+|++++|+++.+.|. .+.|..+.+.
T Consensus 139 ~~~~~---~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~-~v~H~~~~~~--- 208 (249)
T 2nxv_A 139 NDRRR---GNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDF-HLHHYGRAIA--- 208 (249)
T ss_dssp EEEEE---SCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCC-CCEECCCCCC---
T ss_pred ccccc---CCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEecc-EEEECCCCCC---
Confidence 00000 023445677889999999999 7899998765667999999999999999999985 4888654322
Q ss_pred CCCCchHHHHHHHHHHHHhhh
Q psy736 238 FPGGVSKIVLHNAARVAEVWM 258 (304)
Q Consensus 238 ~~~~~~~~~~~n~~r~~~~w~ 258 (304)
.....+++.++.++|.
T Consensus 209 -----~~~~~~~~~~~~~k~~ 224 (249)
T 2nxv_A 209 -----DENFHRLRQEMAQKYR 224 (249)
T ss_dssp -----SHHHHHHHHHHHHHHT
T ss_pred -----hHHHHHHHHHHHHHHh
Confidence 1233445555555554
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.95 E-value=2.1e-29 Score=250.07 Aligned_cols=204 Identities=9% Similarity=-0.019 Sum_probs=0.0
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecc-cCCCcHHHHHhc
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASD-MTWGGFNWKLRE 88 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~-~~~~G~~~a~n~ 88 (304)
||+||||||+||++ +.|.+||+|+++|++++. |||||||||+|+|.++++.+.+.....++.+. ..|.|.+.++|.
T Consensus 1 Mp~vSVIIp~yN~~-~~L~~~L~Sll~Qt~~~~--EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~ 77 (729)
T 3l7i_A 1 MNKLTIIVTYYNAE-EYITGCLESIKQQRTQDF--NLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNI 77 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCH-HHHHHHHHHHHhCCCCCe--EEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHH
Confidence 68999999999999 999999999999998754 99999999999999999888665333344443 348899999999
Q ss_pred cccccCCcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCCCCC
Q psy736 89 KNRHKKTVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGDRSS 168 (304)
Q Consensus 89 g~~~A~gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
|++.|+||||+|+|+|+.+.|++|... +..+....... +................. ........ ....
T Consensus 78 gi~~A~gdyI~flD~Dd~~~p~~l~~l------~~~l~~~d~v~-~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~ 145 (729)
T 3l7i_A 78 ALEEVETPYFMFLDADDELASYAITFY------LEKFNNTDGLI-APIHSFTTQRPQFVDLDR--VRVEYFNA---KENI 145 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhccCCEEEEECCCCCCChhHHHHH------HHHhcCCCEEE-EeeEEeecCCCccccccc--eeeeeecc---hhhH
Confidence 999999999999999999999777111 11110000000 000000000000000000 00000000 0000
Q ss_pred ccccccccceeeeEehHHHhHhC-CCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEeec
Q psy736 169 PLRTPTMAGGLFAIDKDYFYELG-SYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGHVF 230 (304)
Q Consensus 169 ~~~~~~~~G~~~~irr~~f~~iG-GFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~ 230 (304)
........++++++||++|+++| ||||++.. +||+||++|+.+.|+++.++|...++|+.
T Consensus 146 ~~~~~~~~~~~~~~rr~~l~~~gl~fde~~~~--~ED~d~~~rl~~~g~~i~~~~~~~~~~yr 206 (729)
T 3l7i_A 146 NSFLRKQSACNIIFRTAIVRAHHIRFNENLNT--YVDWSFVLEYMKYVNKFVRIFNFPFYFRG 206 (729)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHhhccchhheeeeHHHHHHcCCCcCCCCCc--ccCHHHHHHHHHhcCCEEEecCcEEEEEE
Confidence 00111345678999999999999 99999853 79999999999999999999555566544
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.94 E-value=3.8e-27 Score=235.43 Aligned_cols=214 Identities=13% Similarity=0.067 Sum_probs=135.1
Q ss_pred CCCCCeEEEEEeeCCChHHH-HHHHHHHHhcCCCCCcceEEEEeCCCCCCchH---------------HHHHHhhccccc
Q psy736 8 TFLPTTSIVIVFHNEAWSTL-LRTVWSVINRSPRTLLKEIILVDDASERVVCP---------------IIDVISDQTFEY 71 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L-~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~---------------ii~~~~~~~~~~ 71 (304)
+..|+||||||+||++ +.+ .+||+|+++|++++..+|||||||||+|+|.+ .++.+.++..-.
T Consensus 137 ~~~P~VSViIPtyNe~-~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~ 215 (802)
T 4hg6_A 137 EELPTVDILVPSYNEP-ADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVV 215 (802)
T ss_dssp TTCCCEEEEEECTTCC-HHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred cCCCcEEEEEEECCCC-HHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcE
Confidence 5679999999999999 766 88999999999986456999999999999842 233332222111
Q ss_pred eeecccCCCcHHHHHhccccccCCcEEEEecCCcccccccccce--ee-eeceeeeeCCCceeeeccCCceecccccCCC
Q psy736 72 ITASDMTWGGFNWKLREKNRHKKTVVCPIIDVISDQTFEYITAK--TV-VCPIIDVISDQTFEYITASDMTWGGFNWKLN 148 (304)
Q Consensus 72 i~~~~~~~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~~l~~~--~~-~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~ 148 (304)
+...+..+.|++.++|.|++.|+|||++|+|+|+.++|+.+... .+ ..|.++.+......... +...... ...
T Consensus 216 ~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~--~~~~~~~--~~~ 291 (802)
T 4hg6_A 216 YSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINP--DPIQRNL--ALG 291 (802)
T ss_dssp EEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSC--CHHHHHH--TCC
T ss_pred EEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCC--chHhhhh--hHH
Confidence 12223335799999999999999999999999999999776100 00 01111111110000000 0000000 000
Q ss_pred cccccCChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEeccEEEe
Q psy736 149 FRWYRVPPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCSHVGH 228 (304)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 228 (304)
.+............ ...........+.|+++++||++|+++||||++.. +||.|++.|+.+.|+++.++|++.+.|
T Consensus 292 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~~~~---~ED~~l~~rl~~~G~ri~~~~~~~~~~ 367 (802)
T 4hg6_A 292 DRCPPENEMFYGKI-HRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGETI---TEDAETALEIHSRGWKSLYIDRAMIAG 367 (802)
T ss_dssp TTSCCTTHHHHHTH-HHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCCSSS---SHHHHHHHHHHTTTCCEEECCCCCEEE
T ss_pred hhhhHHHHHHHHHH-HhhHhhcCCceecccchhhhHHHHHHcCCcCCCCc---chHHHHHHHHHHcCCeEEEecCCEEEe
Confidence 00000000000000 00000012234578999999999999999999763 599999999999999999999999988
Q ss_pred ec
Q psy736 229 VF 230 (304)
Q Consensus 229 ~~ 230 (304)
..
T Consensus 368 ~~ 369 (802)
T 4hg6_A 368 LQ 369 (802)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 13
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.93 E-value=1.6e-26 Score=208.65 Aligned_cols=202 Identities=13% Similarity=0.040 Sum_probs=128.8
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeec--ccCCCcHHHHH
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITAS--DMTWGGFNWKL 86 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~--~~~~~G~~~a~ 86 (304)
..|+||||||+||++ +.|.+||+|+++|+++. .+|||||||||+|+|.++++.+.......+..+ ...|.|++.++
T Consensus 46 ~~~~vSViIp~yN~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~ 123 (329)
T 3ckj_A 46 AGRTISVVLPALDEE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKGEAL 123 (329)
T ss_dssp TTCCEEEEEEESSCT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCSHHHHH
T ss_pred cCCcEEEEEeeCCCH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCCHHHHH
Confidence 458999999999999 99999999999999763 359999999999999998887755432222222 35688999999
Q ss_pred hccccccCCcEEEEecCCcc-ccccccc----------ceeeeeceeeeeCC-CceeeeccCCceecccccCCCcccccC
Q psy736 87 REKNRHKKTVVCPIIDVISD-QTFEYIT----------AKTVVCPIIDVISD-QTFEYITASDMTWGGFNWKLNFRWYRV 154 (304)
Q Consensus 87 n~g~~~A~gd~l~flD~D~~-~~~~~l~----------~~~~~~~~i~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (304)
|.|++.|+||||+|+|+|+. +.|++|. ...++.+....... ..... . .....++.. ... .
T Consensus 124 n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~-~-~~~~~~~~~----~~~--~ 195 (329)
T 3ckj_A 124 WRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGG-G-AGATGGGRV----TEL--V 195 (329)
T ss_dssp HHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC-----------------CHH----HHH--T
T ss_pred HHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccc-c-ccccCCCce----ehh--h
Confidence 99999999999999999999 7886661 01112221100000 00000 0 000000000 000 0
Q ss_pred ChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHH-cCCe-EEEEeccEEEe
Q psy736 155 PPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQ-CGGI-LEIIPCSHVGH 228 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~-~G~~-i~~~p~~~v~H 228 (304)
........ ...........|+++++||++|+++| |+++| +||+||++|+.+ .|++ +..+|.....|
T Consensus 196 ~~~~~~~~---~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~~~----~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 196 ARPLLAAL---RPELGCILQPLGGEYAATRELLTSVP-FAPGY----GVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp HHHHHHHH---CGGGGGCSCTTCSCEEEEHHHHTTSC-BCCGG----GHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred HHHHHHHh---hhhhccccCCCccceeeeHHHHHhCC-CCCCC----cccHHHHHHHHHhcCCccEeeecceEEec
Confidence 00000000 00001122335678899999999997 88764 499999999986 6765 77777654444
No 14
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.90 E-value=8.2e-24 Score=194.36 Aligned_cols=199 Identities=13% Similarity=0.064 Sum_probs=124.9
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHh--cCCCCCcceEEEEeCCCCCCchHHHHHHhhcccc-ce-eecccCCCcHHHH
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVIN--RSPRTLLKEIILVDDASERVVCPIIDVISDQTFE-YI-TASDMTWGGFNWK 85 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~--qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~-~i-~~~~~~~~G~~~a 85 (304)
.|+||||||+||++ +.|.+||+|+.+ |+++ ..+|||||||||+|+|.++++.+...... .+ ......|.|++.|
T Consensus 93 ~p~vSVVIP~yNe~-~~l~~~l~sl~~~l~~~~-~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPSRNVA-DTVGGIIDEIHALNERAP-LIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEESSCT-TTHHHHHHHHHHHHHHSC-CCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEcCCCH-HHHHHHHHHHHHHHhcCC-CCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 58999999999999 999999999976 2332 23599999999999999988887654211 11 1122358899999
Q ss_pred HhccccccCCcEEEEecCCcc-ccccccc----------ceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccC
Q psy736 86 LREKNRHKKTVVCPIIDVISD-QTFEYIT----------AKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRV 154 (304)
Q Consensus 86 ~n~g~~~A~gd~l~flD~D~~-~~~~~l~----------~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (304)
+|.|++.|+||||+|+|+|+. +.|++|. ...++.+......... .......++ +....
T Consensus 171 ~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~----~~~~~~~~g-------~v~~~ 239 (387)
T 3f1y_A 171 MWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKG----ESIEEDGGG-------RVTEL 239 (387)
T ss_dssp HHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-----------CCBCCS-------HHHHH
T ss_pred HHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccc----cccccccCC-------chhhh
Confidence 999999999999999999999 7886651 1112211110000000 000000000 00000
Q ss_pred ChhhhhhcCCCCCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHH-HcCCe-EEEEeccEEEe
Q psy736 155 PPREMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVW-QCGGI-LEIIPCSHVGH 228 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~-~~G~~-i~~~p~~~v~H 228 (304)
.............. ......+++++++|++++++ +|+++| +.|+++.+|+. +.|++ |..+|-....|
T Consensus 240 ~~~~l~~~~~~~l~--~~~d~~sG~~a~rR~~l~~i-~f~~gy----g~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 240 TAKPLFNLFYPELA--GFVQPLAGEFVADRELFCSI-PFLTGY----AVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp THHHHHHHHCGGGT--TCSCTTCSCEEEEHHHHTTS-CEECST----THHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred hHHHHHHHHhHhhc--cccccccccEEEEHHHHHhC-CCCCCc----chHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 00000000000000 12223478899999999999 788764 47899999985 56987 99999665444
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.67 E-value=1.4e-16 Score=146.23 Aligned_cols=192 Identities=9% Similarity=-0.049 Sum_probs=108.6
Q ss_pred EEEEEeeCCChHHHHHHHHHHHh-cCCCCCcceEEEEeCCCCCCchHHHHHHhhccc-----cceeeccc--C--CCcHH
Q psy736 14 SIVIVFHNEAWSTLLRTVWSVIN-RSPRTLLKEIILVDDASERVVCPIIDVISDQTF-----EYITASDM--T--WGGFN 83 (304)
Q Consensus 14 SIIIp~yN~~~~~L~~~l~Sll~-qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~-----~~i~~~~~--~--~~G~~ 83 (304)
|||||.+|++ .|..++.++.. +..+ .+|||||||||+|+|.++++.+..... +.+..... . |.|++
T Consensus 2 slVIiP~~eE--~I~~vl~~l~~~~~~~--~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPFKHE--HPEVLLHNVRVAAAHP--RVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEECCSS--CHHHHHHHHHHHHHST--TCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeCCcc--CHHHHHHHHHHhccCC--CeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 4555556655 57888888753 2333 349999999999999999986644322 22222212 2 78999
Q ss_pred HHHhccc----cccCCcEEEEecCCcc-cccccccceeeeeceeeeeCCCceeeeccCCc-eecccccCCCcccccCChh
Q psy736 84 WKLREKN----RHKKTVVCPIIDVISD-QTFEYITAKTVVCPIIDVISDQTFEYITASDM-TWGGFNWKLNFRWYRVPPR 157 (304)
Q Consensus 84 ~a~n~g~----~~A~gd~l~flD~D~~-~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 157 (304)
.|++.|+ ++|+||+++|+|+|.. .+|+.+. .++.+.. .+-.+. .+.+.. ..++. ... .....
T Consensus 78 ~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~--~Ll~~l~---~g~D~V-~g~~~r~~~~~~-----~~~-~~~~~ 145 (397)
T 2bo4_A 78 DGMNTALRYFLEETQWERIHFYDADITSFGPDWIT--KAEEAAD---FGYGLV-RHYFPRASTDAM-----ITW-MITRT 145 (397)
T ss_dssp HHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHH--HHHHHHH---TTCSEE-EEECCCCTTSCH-----HHH-HTHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHH--HHHHHHH---cCCCEE-EEEeccccCCcH-----HHH-HHHHH
Confidence 9999999 8999999999999996 6776551 1111100 000000 000000 00000 000 00000
Q ss_pred hhhhcCCCCCCccccccccceeeeEehHHHhHhCCCC--CCCcccccccHHHHHHHHHcCCeEEEEec
Q psy736 158 EMMRRGGDRSSPLRTPTMAGGLFAIDKDYFYELGSYD--EGMDIWGGENLEMSFRVWQCGGILEIIPC 223 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~G~~~~irr~~f~~iGGFD--e~~~~~g~ED~dl~~R~~~~G~~i~~~p~ 223 (304)
..... .............++.++++|++++++.... +....| +.|+++..++.+.|++|..+|-
T Consensus 146 ll~~~-~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~f-g~eiel~~~a~~~G~rI~EVpi 211 (397)
T 2bo4_A 146 GFALL-WPHTELSWIEQPLGGELLMRREVAAMLYEDERVRRRSDW-GIDTLYTFVTVQQGVSIYECYI 211 (397)
T ss_dssp HHHHH-CTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHHTCCST-THHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHH-HHHhhccccccCCcccEEEeHHHHHHHhhhcccCcCCCc-chHHHHHHHHHHcCCEEEEEEC
Confidence 00000 0000000122224677899999999984311 012234 4699999999999999998884
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.64 E-value=2.3e-16 Score=139.20 Aligned_cols=94 Identities=16% Similarity=0.056 Sum_probs=77.9
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCc---hHHHHHHhhccccceeecccCCCcHHHHH
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVV---CPIIDVISDQTFEYITASDMTWGGFNWKL 86 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t---~~ii~~~~~~~~~~i~~~~~~~~G~~~a~ 86 (304)
.+++|||||+||++ . ++|+++++|++.+. |||||||||+|.| +++++.+.....+.+..+.++|+|++.|+
T Consensus 52 ~~klSIVVPvYNEe-~---~lLesVl~qi~~d~--eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viHQkn~gls~Ar 125 (391)
T 2wvl_A 52 LEQTAIVVPTRNER-L---KLLEGVLSGIPHEA--LILVASNSSPDRFQMERDLLEEFAHLTERPALIFHQKDPALAEAL 125 (391)
T ss_dssp HTTEEEEEEESSCC-H---HHHHHHHHTSCTTS--EEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEETTCHHHHHHH
T ss_pred HhceEEEEeccCcH-H---HHHHHHHhcCCCCc--eEEEEECCCCCChHhHHHHHHHHHhhcccceEEEeccChHHHHHH
Confidence 36799999999999 5 47999999998755 9999999999999 56887887655566777778899999999
Q ss_pred h-cc----------------------cccc---CCcEEEEecCCccccc
Q psy736 87 R-EK----------------------NRHK---KTVVCPIIDVISDQTF 109 (304)
Q Consensus 87 n-~g----------------------~~~A---~gd~l~flD~D~~~~~ 109 (304)
| .| +..| .|+|+.|+|+|..++.
T Consensus 126 ~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~ 174 (391)
T 2wvl_A 126 RAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPG 174 (391)
T ss_dssp HHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHH
T ss_pred HhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCcc
Confidence 6 43 3344 7999999999999865
No 17
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=99.49 E-value=3.4e-13 Score=115.57 Aligned_cols=159 Identities=13% Similarity=0.131 Sum_probs=105.8
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHH---HhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHh
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSV---INRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLR 87 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sl---l~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n 87 (304)
-+|.||||.+|++ +.|...|.-+ |+... +.+.|+||+.. |+. . . ..++.+|
T Consensus 51 ~kvAIIIPyRdR~-~hL~~fl~~lhp~L~rQ~--l~y~I~VieQ~--~~~----------~------F-----NRa~LlN 104 (287)
T 3lw6_A 51 HKMALLVPFRDRF-EELLQFVPHMTAFLKRQG--VAHHIFVLNQV--DRF----------R------F-----NRASLIN 104 (287)
T ss_dssp CEEEEEEEESSCH-HHHHHHHHHHHHHHHHTT--CEEEEEEEEEC--SSS----------C------C-----CHHHHHH
T ss_pred ceEEEEEEeCCHH-HHHHHHHHHHHHHHHHcC--CceEEEEEecC--CCC----------c------c-----chhheec
Confidence 4799999999998 9988877544 44432 46799999883 320 0 1 1277888
Q ss_pred ccccccC--CcEEEEecCCcccccccccceeeeeceeeeeCCCceeeeccCCceecccccCCCcccccCChhhhhhcCCC
Q psy736 88 EKNRHKK--TVVCPIIDVISDQTFEYITAKTVVCPIIDVISDQTFEYITASDMTWGGFNWKLNFRWYRVPPREMMRRGGD 165 (304)
Q Consensus 88 ~g~~~A~--gd~l~flD~D~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
.|...|. -|+++|-|.|..+..+... -.+|.. . .+ . ... .+. ..
T Consensus 105 vGf~ea~~~~d~~ifHDVDLlP~dd~n~---Y~c~~~-----~-------~P-~----Hls-------~~~-------~~ 150 (287)
T 3lw6_A 105 VGFQFASDVYDYIAMHDVDLLPLNDNLL---YEYPSS-----L-------GP-L----HIA-------GPK-------LH 150 (287)
T ss_dssp HHHHHSCTTCCEEEEECTTEEECCTTSC---CCCCCT-----T-------CC-E----ESS-------CTT-------TC
T ss_pred ccHHHHhccCCEEEEecccccccCCCcc---ccCCCC-----C-------Cc-e----EEe-------ecc-------cc
Confidence 8877665 5999999999876543220 011100 0 00 0 000 000 00
Q ss_pred CCCccccccccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEecc------EEEeecc
Q psy736 166 RSSPLRTPTMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIPCS------HVGHVFR 231 (304)
Q Consensus 166 ~~~~~~~~~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p~~------~v~H~~r 231 (304)
...+ .....|++++++|+.|.++||||+.|..||+||.||..|+..+|.++...+.. .+.|.+.
T Consensus 151 ~~~~--Y~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd 220 (287)
T 3lw6_A 151 PKYH--YDNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHN 220 (287)
T ss_dssp SSCC--CTTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCC
T ss_pred CCCC--cCCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEecccc
Confidence 1111 23456899999999999999999999999999999999999999998776542 3566553
No 18
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.40 E-value=6.6e-13 Score=120.30 Aligned_cols=90 Identities=17% Similarity=0.119 Sum_probs=65.9
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCc------hHHHHHHhhccccceeecc--------
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVV------CPIIDVISDQTFEYITASD-------- 76 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t------~~ii~~~~~~~~~~i~~~~-------- 76 (304)
.++|||||+|||+ ..+ |..++.+.+. .+|||||||||+|+| .++++.+............
T Consensus 51 ~~iSVVIP~yNEE-~~l---I~~vL~~i~~--~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~~~~~Vl~~~~p~v~~ 124 (394)
T 2zu9_A 51 GKMAVIVPMKNEK-LHL---VDGVLKAIPH--KCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTHSKIIMIHQKDPGLAK 124 (394)
T ss_dssp TTEEEEEEESSCC-HHH---HHHHHHHSCT--TSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHCCCEEEEETTCHHHHH
T ss_pred CCEEEEEecCccc-HHH---HHHHHHcCCC--CcEEEEEECcCcccccchhhHHHHHHHHhhccccceEEEecCCcchhH
Confidence 4699999999999 654 6666776554 359999999998887 5666665432222111111
Q ss_pred ---------------cCCCcHHHHHhcccccc---CCcEEEEecCCcc
Q psy736 77 ---------------MTWGGFNWKLREKNRHK---KTVVCPIIDVISD 106 (304)
Q Consensus 77 ---------------~~~~G~~~a~n~g~~~A---~gd~l~flD~D~~ 106 (304)
..++|+++|+..|+..| +||+++|+|+|..
T Consensus 125 ~~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl~ 172 (394)
T 2zu9_A 125 AFKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADNY 172 (394)
T ss_dssp HHHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBS
T ss_pred HhhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCCC
Confidence 11359999999999999 9999999999994
No 19
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=99.32 E-value=3.8e-12 Score=114.29 Aligned_cols=100 Identities=14% Similarity=0.230 Sum_probs=77.4
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhcccccee-------ecccCCCcH
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYIT-------ASDMTWGGF 82 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~-------~~~~~~~G~ 82 (304)
++.++|||++||++ + |.+||+||++|.+....+||||.||||.++|.++++.+.... .++. .....|.|+
T Consensus 1 ~~~~pViI~~yNRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I-~~~~~~d~~~~~~~~~N~g~ 77 (343)
T 1fo8_A 1 LAVIPILVIACDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAV-THIRQPDLSNIAVQPDHRKF 77 (343)
T ss_dssp CCCCCEEEEESSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGS-EEEECSCCCCCCCCTTCGGG
T ss_pred CCcccEEEEECCcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCce-EEEEcCCccccccchhhcCc
Confidence 35789999999999 8 999999999998654456999999999999988887754321 1111 112335565
Q ss_pred H----------HHHhccccccCCcEEEEecCCcccccccc
Q psy736 83 N----------WKLREKNRHKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 83 ~----------~a~n~g~~~A~gd~l~flD~D~~~~~~~l 112 (304)
. +++|..+..+++++++|||+|+++.|+.+
T Consensus 78 ~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~ 117 (343)
T 1fo8_A 78 QGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFF 117 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHH
T ss_pred ccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHH
Confidence 3 67777788889999999999999999666
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=97.46 E-value=0.00011 Score=59.58 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=33.6
Q ss_pred ccccccceeeeEehHHHhHhC--CC----CCCCcccccccHHHHHHHHHcCCeE
Q psy736 171 RTPTMAGGLFAIDKDYFYELG--SY----DEGMDIWGGENLEMSFRVWQCGGIL 218 (304)
Q Consensus 171 ~~~~~~G~~~~irr~~f~~iG--GF----De~~~~~g~ED~dl~~R~~~~G~~i 218 (304)
++...++|+++++|++|+++- .| +|...-+.|||+.||.-+..+|+-+
T Consensus 112 ~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 112 EVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp ECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred eeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 555667899999999999983 23 2223335679999999998888765
No 21
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=91.39 E-value=1.1 Score=38.13 Aligned_cols=93 Identities=14% Similarity=0.000 Sum_probs=51.0
Q ss_pred CCCCCeEEEEEeeCCChHHHH---HHHHHHHhcCCCCCcceEEEEeCCC--CCCchHHHHHHhhccccceeecccCC---
Q psy736 8 TFLPTTSIVIVFHNEAWSTLL---RTVWSVINRSPRTLLKEIILVDDAS--ERVVCPIIDVISDQTFEYITASDMTW--- 79 (304)
Q Consensus 8 ~~~p~vSIIIp~yN~~~~~L~---~~l~Sll~qt~~~~~~EIIVVDdgS--~d~t~~ii~~~~~~~~~~i~~~~~~~--- 79 (304)
...|.|=||.|||.+. .... +.-+. |.+. +++ --|||+|+. ++.+.++++.. ...|........
T Consensus 18 ~~~p~IivVTPTy~R~-~Q~a~LtRLa~T-L~~V-p~L--~WIVVEd~~~~t~~va~lL~rs---Gl~y~HL~~~~p~~~ 89 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARL-VQKAELVRLSQT-LSLV-PRL--HWLLVEDAEGPTPLVSGLLAAS---GLLFTHLVVLTPKAQ 89 (281)
T ss_dssp ---CEEEEEEEECCST-THHHHHHHHHHH-HTTS-SSE--EEEEEESSSSCCHHHHHHHHHH---CSEEEEEECCCC---
T ss_pred CCCCeEEEEeCCCCCc-chhHHHHHHHHH-HhcC-Cce--EEEEEcCCCCCCHHHHHHHHHc---CCceEEeccCCCccc
Confidence 5679999999999987 4433 22233 3444 334 889999964 33344444432 223322211100
Q ss_pred ------------CcHHHHHhcccccc-----------------CCcEEEEecCCccccc
Q psy736 80 ------------GGFNWKLREKNRHK-----------------KTVVCPIIDVISDQTF 109 (304)
Q Consensus 80 ------------~G~~~a~n~g~~~A-----------------~gd~l~flD~D~~~~~ 109 (304)
.| ...||.|++.- ..-++.|.|+|....-
T Consensus 90 ~~~~~dp~w~~~rg-~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl 147 (281)
T 3cu0_A 90 RLREGEPGWVHPRG-VEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSR 147 (281)
T ss_dssp --------CCCCCS-HHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECH
T ss_pred cccccccccccchh-HHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccH
Confidence 12 45678775322 2368899999877654
No 22
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=89.75 E-value=1.2 Score=38.41 Aligned_cols=97 Identities=12% Similarity=0.065 Sum_probs=58.7
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchH-HHHHHhhccccceeecccCCCcHHHHHhc
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCP-IIDVISDQTFEYITASDMTWGGFNWKLRE 88 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~-ii~~~~~~~~~~i~~~~~~~~G~~~a~n~ 88 (304)
..+.+|||-||++. +.|.+.|+.+ ++.. ...||+||=|+......+ ....+...... ++...+.... ...|-.
T Consensus 27 ~~~FTvvi~ty~R~-~~L~~lv~~~-~~~~--~v~~IvVvWn~~~~~pp~~~~~~~~~~~vp-v~v~~~~~ns-LnnRF~ 100 (293)
T 1omz_A 27 LDSFTLIMQTYNRT-DLLLRLLNHY-QAVP--SLHKVIVVWNNVGEKGPEELWNSLGPHPIP-VIFKPQTANK-MRNRLQ 100 (293)
T ss_dssp TTCEEEEEEESSCH-HHHHHHHHHH-TTST--TEEEEEEEECCTTCCCTHHHHHHTCCCSSC-EEEEECSSCC-GGGGGS
T ss_pred CCceEEEEEeeccc-HHHHHHHHHH-hcCC--CCCeEEEEeCCCCCCCChhhccccCCCCcc-EEEEeCCCCc-hhhccC
Confidence 45699999999997 8998888875 3332 356999998876543222 12222111111 2222221111 122333
Q ss_pred cccccCCcEEEEecCCcccccccc
Q psy736 89 KNRHKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 89 g~~~A~gd~l~flD~D~~~~~~~l 112 (304)
....-+.|-++.+|+|..++.+.|
T Consensus 101 p~~~i~T~AVLslDDDv~l~~~el 124 (293)
T 1omz_A 101 VFPEVETNAVLMVDDDTLISAQDL 124 (293)
T ss_dssp CCTTCCSSEEEEECTTEEECHHHH
T ss_pred CCccCCcCEEEEEcCCCCCCHHHH
Confidence 466788999999999998777555
No 23
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=88.58 E-value=3 Score=34.96 Aligned_cols=94 Identities=14% Similarity=0.020 Sum_probs=52.1
Q ss_pred CCCCeEEEEEeeCCChHHHH---HHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeeccc-------C
Q psy736 9 FLPTTSIVIVFHNEAWSTLL---RTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDM-------T 78 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~---~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~-------~ 78 (304)
++|.|=||.|||.+. .... +.-+. |.+. +++ --|||+|+..- |..+.+-++.....|...... +
T Consensus 1 ~~p~I~vVTPTy~R~-~Q~a~LtRLa~T-L~~V-p~l--~WIVVEd~~~~-~~~v~~lL~~sgl~y~HL~~~~~~~~~~~ 74 (246)
T 2d0j_A 1 QLPTIYAITPTYSRP-VQKAELTRLANT-FRQV-AQL--HWILVEDAAAR-SELVSRFLARAGLPSTHLHVPTPRRYKRP 74 (246)
T ss_dssp CCCCEEEEEEECCST-THHHHHHHHHHH-HTTS-TTE--EEEEEESSSSC-CHHHHHHHHHSCSCEEEEECCCCCC----
T ss_pred CCCEEEEEeCCCCcc-chhHHHHHHHHH-HhcC-Cce--EEEEEcCCCCC-CHHHHHHHHHcCCceEEEecCCccccCCC
Confidence 368899999999997 4333 33333 3344 333 88999997543 222222333333333332211 0
Q ss_pred --CCcHHHHHhccccc---------cCCcEEEEecCCccccc
Q psy736 79 --WGGFNWKLREKNRH---------KKTVVCPIIDVISDQTF 109 (304)
Q Consensus 79 --~~G~~~a~n~g~~~---------A~gd~l~flD~D~~~~~ 109 (304)
..| ...||.|++. ...-++.|.|+|....-
T Consensus 75 ~~prg-~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l 115 (246)
T 2d0j_A 75 GLPRA-TEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSL 115 (246)
T ss_dssp CCCCC-HHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECT
T ss_pred CCcch-HHHHHHHHHHHHHhcccccCccceEEEccCCCcccH
Confidence 012 4677777422 23468899999887654
No 24
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=86.03 E-value=3.9 Score=34.40 Aligned_cols=91 Identities=18% Similarity=0.153 Sum_probs=52.9
Q ss_pred CCCeEEEEEeeCCChHH---HHHHHHHHHhcCCCCCcceEEEEeCCC--CCCchHHHHHHhhccccceeecccC------
Q psy736 10 LPTTSIVIVFHNEAWST---LLRTVWSVINRSPRTLLKEIILVDDAS--ERVVCPIIDVISDQTFEYITASDMT------ 78 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~---L~~~l~Sll~qt~~~~~~EIIVVDdgS--~d~t~~ii~~~~~~~~~~i~~~~~~------ 78 (304)
+|.|=||.|||.+. .. |.+.-+.| .+. +++ --|||+|+. ++.+.++++.. ...|.+.....
T Consensus 2 ~p~I~vVTPTy~R~-~Q~a~LtRLa~TL-~~V-p~L--~WIVVEd~~~~t~~va~lL~~s---gl~y~HL~~~~p~~~~~ 73 (253)
T 1v84_A 2 LPTIHVVTPTYSRP-VQKAELTRMANTL-LHV-PNL--HWLVVEDAPRRTPLTARLLRDT---GLNYTHLHVETPRNYKL 73 (253)
T ss_dssp CCEEEEEEEECCST-THHHHHHHHHHHH-TTS-SSE--EEEEEESSSSCCHHHHHHHHHH---CCEEEEEECCCCHHHHC
T ss_pred CCEEEEEeCCCCcc-chhHHHHHHhhhh-ccC-Cce--EEEEEeCCCCCCHHHHHHHHHc---CCceEEeecCCCccccc
Confidence 68899999999987 33 33344443 333 444 889999964 34445444433 22333221110
Q ss_pred ---------CCcHHHHHhccccc---------cCCcEEEEecCCccccc
Q psy736 79 ---------WGGFNWKLREKNRH---------KKTVVCPIIDVISDQTF 109 (304)
Q Consensus 79 ---------~~G~~~a~n~g~~~---------A~gd~l~flD~D~~~~~ 109 (304)
..| ...||.|++. ...-++.|.|+|....-
T Consensus 74 ~~~~~~~~~~rg-~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl 121 (253)
T 1v84_A 74 RGDARDPRIPRG-TMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSL 121 (253)
T ss_dssp C-------CCTT-HHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECH
T ss_pred cccccCccccch-HHHHHHHHHHHHHhcccccccceeEEEecCCCcccH
Confidence 012 4577877432 33568899999887664
No 25
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=69.86 E-value=19 Score=30.52 Aligned_cols=55 Identities=5% Similarity=0.039 Sum_probs=35.4
Q ss_pred CCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhh
Q psy736 11 PTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISD 66 (304)
Q Consensus 11 p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~ 66 (304)
..+-|++.+=+.-...+.-++.|++..+.. ....+.|+.++-+++..+.++.+.+
T Consensus 4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~ 58 (276)
T 3tzt_A 4 MADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLK 58 (276)
T ss_dssp -CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eeEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHH
Confidence 457777665333236777789999887653 2348878888777766666655543
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=53.71 E-value=79 Score=26.12 Aligned_cols=44 Identities=27% Similarity=0.333 Sum_probs=29.8
Q ss_pred ccceeeeEehHHHhHhCCCCCCCcccccccHHH--HHHHHHcCCeEEEEe
Q psy736 175 MAGGLFAIDKDYFYELGSYDEGMDIWGGENLEM--SFRVWQCGGILEIIP 222 (304)
Q Consensus 175 ~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl--~~R~~~~G~~i~~~p 222 (304)
...|..+++++.+++.-..+++- .|-+|- .+|+.+.|++|...+
T Consensus 181 ~~~GiY~f~~~~l~~~~~~~~~~----le~~e~le~lr~l~~G~~I~~~~ 226 (253)
T 4fcu_A 181 RHLGLYAYRVSLLQEYVTWEMGK----LEKLESLEQLRVLENGHRIAIAV 226 (253)
T ss_dssp EEEEEEEEEHHHHHHHTTSCCCH----HHHHHTCTTHHHHHTTCCEEEEE
T ss_pred EEEEEEEeCHHHHHHHHhCCCCc----ccchhHHHHHHHHHCCCceEEEE
Confidence 35688999999999987654321 233222 357779999987664
No 27
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=53.59 E-value=83 Score=25.31 Aligned_cols=74 Identities=7% Similarity=-0.019 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccCCcEEEEecCC
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKKTVVCPIIDVI 104 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~flD~D 104 (304)
..|..+++.+.+... ..+|+||-+. +. +.+.+.......+........|.+.+. .+++....+.++++++|
T Consensus 28 pli~~~i~~~~~~~~---~~~ivvv~~~--~~---i~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D 98 (245)
T 1h7e_A 28 PMIQHVYERALQVAG---VAEVWVATDD--PR---VEQAVQAFGGKAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGD 98 (245)
T ss_dssp EHHHHHHHHHHTCTT---CCEEEEEESC--HH---HHHHHHHTTCEEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTT
T ss_pred hHHHHHHHHHHhCCC---CCeEEEECCc--HH---HHHHHHHcCCeEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCC
Confidence 478888888765421 1388887652 22 222222212222222112234555544 34444467899999999
Q ss_pred ccc
Q psy736 105 SDQ 107 (304)
Q Consensus 105 ~~~ 107 (304)
.-+
T Consensus 99 ~P~ 101 (245)
T 1h7e_A 99 EPM 101 (245)
T ss_dssp CTT
T ss_pred cCc
Confidence 854
No 28
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=53.15 E-value=20 Score=30.85 Aligned_cols=40 Identities=10% Similarity=-0.008 Sum_probs=27.7
Q ss_pred HHHHHHHHHH-HhcCCCCCcceEEEEeCCCCCCchHHHHHHhh
Q psy736 25 STLLRTVWSV-INRSPRTLLKEIILVDDASERVVCPIIDVISD 66 (304)
Q Consensus 25 ~~L~~~l~Sl-l~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~ 66 (304)
..+.-++.|+ +..+..+ ..+.|++|+-+++..+.++.+..
T Consensus 13 ~~~~vli~Sl~l~~~~~~--~~f~il~~~ls~~~~~~L~~~~~ 53 (311)
T 1g9r_A 13 AYLCVAAKSVEAAHPDTE--IRFHVLDAGISEANRAAVAANLR 53 (311)
T ss_dssp HHHHHHHHHHHHTCTTSC--CEEEEEESSCCHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHcCCCC--ceEEEEECCCCHHHHHHHHHHHH
Confidence 6677789999 7766443 48888888777766666666533
No 29
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=46.62 E-value=61 Score=25.89 Aligned_cols=73 Identities=14% Similarity=0.028 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccCCcEEEEecCC
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKKTVVCPIIDVI 104 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~flD~D 104 (304)
..|..+++.+.+. . .+|+||-+. + ++.+.+... ...+........|.+.+.+ +++....|+++++++|
T Consensus 28 pli~~~l~~~~~~-~----~~i~v~~~~--~---~i~~~~~~~-~~~~~~~~~~~~g~~~~~~-~~~~~~~~~vlv~~~D 95 (234)
T 2y6p_A 28 PLIRWVVEGLVKT-G----ERVILATDS--E---RVKEVVEDL-CEVFLTPSDLPSGSDRVLY-VVRDLDVDLIINYQGD 95 (234)
T ss_dssp EHHHHHHHHHHTT-T----SCEEEEESC--H---HHHHHHTTT-SEEEECCTTCCSHHHHHHH-HHTTCCCSEEEECCTT
T ss_pred EHHHHHHHHHHHh-C----CEEEEECCh--H---HHHHHHHhc-eEEEECCcccccchHHHHH-HHHhCCCCEEEEecCC
Confidence 4788888887654 2 277777542 2 222233222 2222211222456666663 5566678999999999
Q ss_pred c-cccc
Q psy736 105 S-DQTF 109 (304)
Q Consensus 105 ~-~~~~ 109 (304)
. .+.+
T Consensus 96 ~P~~~~ 101 (234)
T 2y6p_A 96 EPFVYE 101 (234)
T ss_dssp CCCCCH
T ss_pred cCcCCH
Confidence 8 5554
No 30
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=45.69 E-value=39 Score=26.73 Aligned_cols=69 Identities=6% Similarity=0.013 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCC-CcHHHHHhccccccCCcEEEEecC
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTW-GGFNWKLREKNRHKKTVVCPIIDV 103 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~-~G~~~a~n~g~~~A~gd~l~flD~ 103 (304)
..|..+++.+... ..+|+||-+...+ .+.......+... ... .|...++..|++....++++++++
T Consensus 34 pli~~~l~~l~~~-----~~~ivvv~~~~~~-------~~~~~~~~~v~~~-~~~~~G~~~si~~~l~~~~~~~vlv~~~ 100 (201)
T 1e5k_A 34 PLWQHVADALMTQ-----LSHVVVNANRHQE-------IYQASGLKVIEDS-LADYPGPLAGMLSVMQQEAGEWFLFCPC 100 (201)
T ss_dssp EHHHHHHHHHHHH-----CSCEEEECSSSHH-------HHHTTSCCEECCC-TTCCCSHHHHHHHHHHHCCSSEEEEEET
T ss_pred eHHHHHHHHHHhh-----CCEEEEEcCCcHH-------HHhhcCCeEEecC-CCCCCCHHHHHHHHHHhCCCCcEEEEeC
Confidence 4777788876632 1288887553211 1211111222211 122 577888888888878899999999
Q ss_pred Ccc
Q psy736 104 ISD 106 (304)
Q Consensus 104 D~~ 106 (304)
|.-
T Consensus 101 D~P 103 (201)
T 1e5k_A 101 DTP 103 (201)
T ss_dssp TCT
T ss_pred CcC
Confidence 973
No 31
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=43.96 E-value=92 Score=24.92 Aligned_cols=75 Identities=9% Similarity=-0.038 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecc---cCCCcHHHHHhcccccc-CCcEEEE
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASD---MTWGGFNWKLREKNRHK-KTVVCPI 100 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~---~~~~G~~~a~n~g~~~A-~gd~l~f 100 (304)
..|..+++.+.+... ..+|||+-+ .+. +.+.+.....+.+.... ....|-..++..++... ..|++++
T Consensus 29 pli~~~i~~~~~~~~---~~~ivv~~~--~~~---i~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv 100 (229)
T 1qwj_A 29 PLIGWVLRAALDAGV---FQSVWVSTD--HDE---IENVAKQFGAQVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGN 100 (229)
T ss_dssp EHHHHHHHHHHHHTC---CSEEEEEES--CHH---HHHHHHHTTCEEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEE
T ss_pred EHHHHHHHHHHhCCC---cCEEEEECC--hHH---HHHHHHHcCCEEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEE
Confidence 477788888765432 127887764 122 22222221122222111 11222234555555554 5789999
Q ss_pred ecCCccc
Q psy736 101 IDVISDQ 107 (304)
Q Consensus 101 lD~D~~~ 107 (304)
+++|.-+
T Consensus 101 ~~~D~Pl 107 (229)
T 1qwj_A 101 IQATSPC 107 (229)
T ss_dssp ECTTCTT
T ss_pred ecCCCCc
Confidence 9999754
No 32
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=36.54 E-value=61 Score=26.83 Aligned_cols=78 Identities=8% Similarity=0.092 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc--c-ccceeecccCCCcHHHHHhccccccCCcEEEEe
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ--T-FEYITASDMTWGGFNWKLREKNRHKKTVVCPII 101 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~--~-~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~fl 101 (304)
..|..+|+++.+.. . .+|+||=+... ..++.+.+... . ............|.+.++..+......+.++++
T Consensus 56 pli~~~l~~l~~~g---~-~~iivv~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~ 129 (269)
T 4ecm_A 56 PMIYHAVYKLKQCD---I-TDIMIITGKEH--MGDVVSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVI 129 (269)
T ss_dssp EHHHHHHHHHHHTT---C-CEEEEEECTTT--HHHHHHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEE
T ss_pred EHHHHHHHHHHHCC---C-CEEEEECChhh--HHHHHHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEE
Confidence 47777888876642 2 27777765321 12233333321 1 111111222345888888888776667889999
Q ss_pred cCCcccc
Q psy736 102 DVISDQT 108 (304)
Q Consensus 102 D~D~~~~ 108 (304)
++|....
T Consensus 130 ~~D~~~~ 136 (269)
T 4ecm_A 130 LGDNIFS 136 (269)
T ss_dssp ETTEEES
T ss_pred eCCccCc
Confidence 9998554
No 33
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=36.00 E-value=83 Score=25.07 Aligned_cols=72 Identities=10% Similarity=-0.053 Sum_probs=42.8
Q ss_pred CCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhc-cccceeecccCCCcHHHHHhccccccCCcEEE
Q psy736 21 NEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQ-TFEYITASDMTWGGFNWKLREKNRHKKTVVCP 99 (304)
Q Consensus 21 N~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~-~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~ 99 (304)
+.. ..|..+++.+... +||||-+. + +.++.+... ....+.. .....|...++..|++.+ .+++
T Consensus 24 ~G~-pli~~~~~~l~~~-------~vvvv~~~--~---~~~~~~~~~~~~~~v~d-~~~~~G~~~si~~gl~~~-~~~v- 87 (208)
T 3ngw_A 24 CGK-KLIEWVLEKYSPF-------QTVFVCRD--E---KQAEKLSSRYEAEFIWD-LHKGVGSIAGIHAALRHF-GSCV- 87 (208)
T ss_dssp TTE-EHHHHHHHHHTTS-------EEEEECSS--H---HHHHHHHTTSCSCEECC-TTCCCSHHHHHHHHHHHH-SSEE-
T ss_pred CCe-eHHHHHHHHhcCC-------CEEEEECC--H---HHHHHHHHhcCCeEEec-CCCCCChHHHHHHHHHHc-CCCE-
Confidence 444 5888888886432 78877642 1 222233321 1222221 123457778888888877 8999
Q ss_pred EecCCcccc
Q psy736 100 IIDVISDQT 108 (304)
Q Consensus 100 flD~D~~~~ 108 (304)
++++|.-+.
T Consensus 88 v~~~D~P~i 96 (208)
T 3ngw_A 88 VAAIDMPFV 96 (208)
T ss_dssp EEETTCTTC
T ss_pred EEECCccCC
Confidence 999997543
No 34
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=35.66 E-value=1.1e+02 Score=23.41 Aligned_cols=75 Identities=11% Similarity=0.019 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc--CCcEEEEec
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK--KTVVCPIID 102 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A--~gd~l~flD 102 (304)
..|..+++.+.+.. . .+|+||-+...+ .+.+.+.......+.. .....|...++..|++.. ..+++++++
T Consensus 32 pll~~~l~~l~~~~---~-~~i~vv~~~~~~---~~~~~~~~~~~~~~~~-~~~~~g~~~~i~~al~~~~~~~~~vlv~~ 103 (197)
T 2wee_A 32 TVLGATLDVARQAG---F-DQLILTLGGAAS---AVRAAMALDGTDVVVV-EDVERGCAASLRVALARVHPRATGIVLML 103 (197)
T ss_dssp EHHHHHHHHHHHTT---C-SEEEEEECTTHH---HHHHHSCCTTSEEEEC-C----CCHHHHHHHHTTSCTTEEEEEEEE
T ss_pred cHHHHHHHHHHhcC---C-CcEEEEeCCCHH---HHHHHhccCCCEEEEC-CCcccCHHHHHHHHHHHhcccCCeEEEEe
Confidence 47788888876542 1 277777643222 1211222111122221 112246677777777665 468999999
Q ss_pred CCccc
Q psy736 103 VISDQ 107 (304)
Q Consensus 103 ~D~~~ 107 (304)
+|.-.
T Consensus 104 ~D~P~ 108 (197)
T 2wee_A 104 GDQPQ 108 (197)
T ss_dssp TTCTT
T ss_pred CCcCC
Confidence 99843
No 35
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=35.16 E-value=45 Score=25.78 Aligned_cols=75 Identities=8% Similarity=0.002 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc--CCcEEEEec
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK--KTVVCPIID 102 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A--~gd~l~flD 102 (304)
..|..+++.+.+.. . .+|+||-+...+ .+.+.+.......+.. .....|...++..++... ..+++++++
T Consensus 32 pli~~~l~~l~~~~---~-~~i~vv~~~~~~---~~~~~~~~~~~~~~~~-~~~~~g~~~~i~~al~~~~~~~~~vlv~~ 103 (199)
T 2waw_A 32 TLLGATLAMARRCP---F-DQLIVTLGGAAD---EVLEKVELDGLDIVLV-DDAGLGCSSSLKSALTWVDPTAEGIVLML 103 (199)
T ss_dssp EHHHHHHHHHHTSS---C-SEEEEEECTTHH---HHHHHSCCTTSEEEEC-CCCCTTCCCHHHHHHHTSCTTCSEEEEEE
T ss_pred CHHHHHHHHHHhCC---C-CcEEEEeCCCHH---HHHHHhccCCCEEEEC-CCcccCHHHHHHHHHHhhhccCCeEEEEe
Confidence 47777888865442 1 278877653222 1222222111122221 112235455555665555 568999999
Q ss_pred CCccc
Q psy736 103 VISDQ 107 (304)
Q Consensus 103 ~D~~~ 107 (304)
+|.-.
T Consensus 104 ~D~P~ 108 (199)
T 2waw_A 104 GDQPG 108 (199)
T ss_dssp TTCTT
T ss_pred CCccc
Confidence 99854
No 36
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=34.77 E-value=1.3e+02 Score=26.52 Aligned_cols=70 Identities=10% Similarity=0.039 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccCCcEEEEecCC
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKKTVVCPIIDVI 104 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~flD~D 104 (304)
..|..+++.+.+... ..+|+||-+ . .+ .++.+... +.... ...|...++..|++....++++++++|
T Consensus 32 PLi~~~l~~l~~~~~---~~~IvVvt~-~-~~---~i~~~~~~----v~~v~-~g~g~~~sv~~aL~~l~~d~vlv~~~D 98 (371)
T 1w55_A 32 PLWLYATKNLSSFYP---FKKIVVTSS-N-IT---YMKKFTKN----YEFIE-GGDTRAESLKKALELIDSEFVMVSDVA 98 (371)
T ss_dssp EHHHHHHHHHHTTSC---CSCEEEEES-C-HH---HHHTTCSS----SEEEE-CCSSHHHHHHHHHTTCCSSEEEEEETT
T ss_pred EHHHHHHHHHHccCC---CCeEEEEcC-C-HH---HHHHHhCC----CEEEe-CCCChHHHHHHHHHhcCCCeEEEEeCC
Confidence 478888888654221 228888776 2 11 12111111 11222 234556677777776668999999999
Q ss_pred ccc
Q psy736 105 SDQ 107 (304)
Q Consensus 105 ~~~ 107 (304)
.-+
T Consensus 99 ~Pl 101 (371)
T 1w55_A 99 RVL 101 (371)
T ss_dssp CTT
T ss_pred ccc
Confidence 754
No 37
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=34.76 E-value=1.3e+02 Score=24.83 Aligned_cols=44 Identities=23% Similarity=0.398 Sum_probs=30.6
Q ss_pred ccceeeeEehHHHhHhCCCCCCCcccccccHHH--HHHHHHcCCeEEEEe
Q psy736 175 MAGGLFAIDKDYFYELGSYDEGMDIWGGENLEM--SFRVWQCGGILEIIP 222 (304)
Q Consensus 175 ~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl--~~R~~~~G~~i~~~p 222 (304)
...|..+++++++++.-...+.. .|..|- .+|+..+|++|...+
T Consensus 189 ~~~GiY~y~~~~l~~~~~l~~s~----lE~~e~leqlr~le~G~~i~~~~ 234 (256)
T 3tqd_A 189 RHVGIYAYRVGFLEEYLSWDACP----AEKMEALEQLRILWHGGRIHMVV 234 (256)
T ss_dssp EEEEEEEEEHHHHHHHHHSCCCH----HHHHHTCTTHHHHHTTCCCEEEE
T ss_pred EEEEEEEcCHHHHHHHHhCCCCc----ccchhhhHHHHHHHCCCeEEEEE
Confidence 34678999999999986655432 233321 368899999987765
No 38
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=33.15 E-value=1.5e+02 Score=23.15 Aligned_cols=29 Identities=10% Similarity=-0.167 Sum_probs=23.5
Q ss_pred CCcHHHHHhccccccCCcEEEEecCCccc
Q psy736 79 WGGFNWKLREKNRHKKTVVCPIIDVISDQ 107 (304)
Q Consensus 79 ~~G~~~a~n~g~~~A~gd~l~flD~D~~~ 107 (304)
..|...++..|++....+.++++++|.-.
T Consensus 81 ~~g~~~~i~~al~~~~~~~~lv~~~D~P~ 109 (201)
T 2e8b_A 81 ESASIIGLYTALKHAKEENVFVLSGDLPL 109 (201)
T ss_dssp SCCHHHHHHHHHHHCSSSEEEEEETTCTT
T ss_pred CCCcHHHHHHHHHHcCCCCEEEEeCCcCc
Confidence 45778888888877778999999999754
No 39
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=31.69 E-value=1.4e+02 Score=24.30 Aligned_cols=47 Identities=17% Similarity=0.147 Sum_probs=29.2
Q ss_pred cccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEe
Q psy736 174 TMAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIP 222 (304)
Q Consensus 174 ~~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p 222 (304)
....|..++++++++++-...+.-. --.|.++ .+|+...|++|...+
T Consensus 179 ~~n~GiY~~~~~~l~~~~~~~~~~~-e~~E~le-~lr~l~~G~~i~~~~ 225 (252)
T 3oam_A 179 LRHIGIYAYRAGFINTYLDWQPSQL-EKIECLE-QLRVLWHGEKIHVAV 225 (252)
T ss_dssp EEEEEEEEEETTHHHHHHHSCCCHH-HHHHTCT-THHHHHTTCCEEEEE
T ss_pred eEEEEEEEcCHHHHHHHHcCCCCcc-cccchhH-HHHHHHCCCeEEEEE
Confidence 4557889999999988744432210 0123333 357778899987653
No 40
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=28.57 E-value=1.6e+02 Score=25.38 Aligned_cols=20 Identities=10% Similarity=-0.032 Sum_probs=16.0
Q ss_pred ccccCCcEEEEecCCccccc
Q psy736 90 NRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 90 ~~~A~gd~l~flD~D~~~~~ 109 (304)
.....-|-+++||+|+.+..
T Consensus 90 ~~l~~ydrvlYLDaD~lv~~ 109 (333)
T 1ll2_A 90 WSLTQYSKCVFMDADTLVLA 109 (333)
T ss_dssp GGCTTCSEEEEECTTEEECS
T ss_pred hHhcCCCeEEEEeCCEEecc
Confidence 44566789999999998775
No 41
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=28.54 E-value=70 Score=25.50 Aligned_cols=75 Identities=12% Similarity=0.047 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeec---ccCCCcHHHHHhcccccc--CCcEEE
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITAS---DMTWGGFNWKLREKNRHK--KTVVCP 99 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~---~~~~~G~~~a~n~g~~~A--~gd~l~ 99 (304)
..|..+++.+.+... ..+||||-+. +...+ .+.......+... .....|...++..+++.. ..|.++
T Consensus 30 pll~~~l~~~~~~~~---~~~ivvv~~~--~~i~~---~~~~~~~~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vl 101 (228)
T 1ezi_A 30 SLLGHTINAAISSKC---FDRIIVSTDG--GLIAE---EAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVT 101 (228)
T ss_dssp EHHHHHHHHHHHHCC---CSEEEEEESC--HHHHH---HHHHTTCEEEECCC------CHHHHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHhCCC---CCEEEEECCC--HHHHH---HHHHcCCEEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEE
Confidence 477888888766432 1288888752 22112 2222111211111 112345566666666655 358999
Q ss_pred EecCCccc
Q psy736 100 IIDVISDQ 107 (304)
Q Consensus 100 flD~D~~~ 107 (304)
++++|.-+
T Consensus 102 v~~~D~P~ 109 (228)
T 1ezi_A 102 LLQPTSPL 109 (228)
T ss_dssp ECCTTCTT
T ss_pred EEcCCCCc
Confidence 99999754
No 42
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=27.54 E-value=3.2e+02 Score=24.11 Aligned_cols=73 Identities=7% Similarity=0.081 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhccccccC-CcEEEEecC
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHKK-TVVCPIIDV 103 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A~-gd~l~flD~ 103 (304)
..|..+|+.+.+.. . .+|+||=+...+. +.+.+......++. .....|...++..++.... .+.++++++
T Consensus 37 pli~~~l~~l~~~~---~-~~i~vv~~~~~~~---i~~~~~~~~~~~v~--~~~~~g~~~~i~~~~~~~~~~~~~lv~~~ 107 (459)
T 4fce_A 37 PMVQHVIDAAMKLG---A-QHVHLVYGHGGEL---LKKTLADPSLNWVL--QAEQLGTGHAMQQAAPHFADDEDILMLYG 107 (459)
T ss_dssp EHHHHHHHHHHHHT---C-SCEEEEESSCHHH---HHHHC-----CEEE--CSSCCCHHHHHHHHGGGSCTTSEEEEEET
T ss_pred eHHHHHHHHHHhCC---C-CcEEEEeCCCHHH---HHHHhccCCcEEEe--CCCCCCcHHHHHHHHHhcCCCCcEEEEeC
Confidence 47788888876653 1 2777776533221 22222221222332 2234577778888877765 489999999
Q ss_pred Ccc
Q psy736 104 ISD 106 (304)
Q Consensus 104 D~~ 106 (304)
|.-
T Consensus 108 D~P 110 (459)
T 4fce_A 108 DVP 110 (459)
T ss_dssp TCT
T ss_pred Ccc
Confidence 983
No 43
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=26.10 E-value=96 Score=27.19 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=36.2
Q ss_pred CCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCC
Q psy736 10 LPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERV 56 (304)
Q Consensus 10 ~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~ 56 (304)
-++.++|+.++|++...+.+++++|...-.....+-.+++.|..=++
T Consensus 26 r~nAtfV~L~RN~el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFte 72 (348)
T 1s4n_A 26 KPKACYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTE 72 (348)
T ss_dssp CCCEEEEEECCGGGHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCH
T ss_pred CCceEEEEEeccHHHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCH
Confidence 46799999999999889999999987654444455788888865443
No 44
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=24.35 E-value=2.2e+02 Score=23.51 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=29.7
Q ss_pred ccceeeeEehHHHhHhCCCCCCCcccccccHHHHHHHHHcCCeEEEEe
Q psy736 175 MAGGLFAIDKDYFYELGSYDEGMDIWGGENLEMSFRVWQCGGILEIIP 222 (304)
Q Consensus 175 ~~G~~~~irr~~f~~iGGFDe~~~~~g~ED~dl~~R~~~~G~~i~~~p 222 (304)
...|..+++++++++.-..++.. +.-.|.+| .+|+.+.|++|....
T Consensus 196 ~~~GiY~y~~~~l~~~~~~~~~~-lE~~e~le-qlr~le~G~~I~~~~ 241 (264)
T 3k8d_A 196 RHLGIYGYRAGFIRRYVNWQPSP-LEHIEMLE-QLRVLWYGEKIHVAV 241 (264)
T ss_dssp EECSEEEEEHHHHHHHHHSCCCH-HHHHHTCT-THHHHHTTCCEEEEE
T ss_pred EEEEEEEECHHHHHHHHhCCCCh-hhhHHHHH-HHHHHHCCCceEEEE
Confidence 34678899999999875554331 11112223 268889999987753
No 45
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=23.96 E-value=46 Score=25.84 Aligned_cols=75 Identities=11% Similarity=0.028 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccc--cceeecccCCCcHHHHHhccccccCCcEEEEec
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTF--EYITASDMTWGGFNWKLREKNRHKKTVVCPIID 102 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~--~~i~~~~~~~~G~~~a~n~g~~~A~gd~l~flD 102 (304)
..|..+++.+.+.. . .+|+||=+...+. +.+.+..... ..+........|...++..+++.. .+.+++++
T Consensus 28 pli~~~l~~l~~~~---~-~~v~vv~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~g~~~si~~al~~~-~~~vlv~~ 99 (196)
T 3rsb_A 28 CLIDYVVSPLLKSK---V-NNIFIATSPNTPK---TKEYINSAYKDYKNIVVIDTSGKGYIEDLNECIGYF-SEPFLVVS 99 (196)
T ss_dssp EHHHHHHHHHHSSS---C-CCEEEECCTTCHH---HHHHHHHHTTTTTEEEE--------CCCCCTTTTTC-SSCEEEEE
T ss_pred EHHHHHHHHHHHCC---C-CEEEEEeCCChHH---HHHHHHhhccCCCCEEEEECCCCCcHHHHHHHHHhC-CCCEEEEe
Confidence 48888998876542 1 2888876533322 2222222110 012222222344455566666666 78999999
Q ss_pred CCccc
Q psy736 103 VISDQ 107 (304)
Q Consensus 103 ~D~~~ 107 (304)
+|.-+
T Consensus 100 ~D~P~ 104 (196)
T 3rsb_A 100 SDLIN 104 (196)
T ss_dssp TTEES
T ss_pred CCccc
Confidence 99743
No 46
>1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6
Probab=23.64 E-value=76 Score=27.97 Aligned_cols=32 Identities=6% Similarity=0.097 Sum_probs=22.7
Q ss_pred EEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEe
Q psy736 14 SIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVD 50 (304)
Q Consensus 14 SIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVD 50 (304)
.||+|+|+.+ . .+....++++.+|+. |||=||
T Consensus 295 ~VivP~fgd~-~--D~~A~~~L~~~fP~r--~Vi~v~ 326 (355)
T 1xkn_A 295 VVLVPTYRCP-R--DQQAIDILQQCFPKR--EVVGID 326 (355)
T ss_dssp EEEEEECSST-H--HHHHHHHHHHHCTTS--EEEEEE
T ss_pred EEEEeeCCCc-c--cHHHHHHHHHHCCCC--EEEEee
Confidence 4899999997 4 333344466666765 999998
No 47
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=23.45 E-value=98 Score=25.60 Aligned_cols=32 Identities=6% Similarity=-0.131 Sum_probs=23.4
Q ss_pred CCcHHHHHhccccccCCcEEEEecCCcccccc
Q psy736 79 WGGFNWKLREKNRHKKTVVCPIIDVISDQTFE 110 (304)
Q Consensus 79 ~~G~~~a~n~g~~~A~gd~l~flD~D~~~~~~ 110 (304)
..|.+.++..+......+.++++.+|....++
T Consensus 105 ~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~ 136 (281)
T 3juk_A 105 MKGLGHAILTGEALIGNEPFAVILADDLCISH 136 (281)
T ss_dssp CCCHHHHHHHTHHHHCSSCEEEECTTEEEECT
T ss_pred CCCcHHHHHHHHHHcCCCCEEEEeCCeeccCc
Confidence 45777788777766656778889999866555
No 48
>1t6t_1 Putative protein; structural genomics, PSI, protein structur initiative, midwest center for structural genomics, MCSG, U function; 1.80A {Aquifex aeolicus} SCOP: c.136.1.1
Probab=23.41 E-value=49 Score=24.17 Aligned_cols=24 Identities=21% Similarity=0.255 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCC
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDA 52 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdg 52 (304)
+.|...++.|..... -|+|||+.-
T Consensus 6 ~~l~e~~~~l~~~s~----~~vIvVEGk 29 (118)
T 1t6t_1 6 RNLSEWIKELKKASR----EAVILVEGK 29 (118)
T ss_dssp CSHHHHHHHHHHHTT----TSEEEESSH
T ss_pred HHHHHHHHHHHHhcC----CcEEEEECh
Confidence 456777777766553 289999873
No 49
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=22.07 E-value=2.5e+02 Score=21.97 Aligned_cols=75 Identities=7% Similarity=-0.101 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceeecccCCCcHHHHHhcccccc-------CCcE
Q psy736 25 STLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITASDMTWGGFNWKLREKNRHK-------KTVV 97 (304)
Q Consensus 25 ~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~~~~~~~G~~~a~n~g~~~A-------~gd~ 97 (304)
..|..+++.+.+... . .+|+||-+...+... .+.......+...+ ...|...++..|+... ..+.
T Consensus 35 pli~~~l~~l~~~~~--~-~~ivvv~~~~~~~~~----~~~~~~~~~i~~~~-~~~~~~~si~~~l~~~~~~~~~~~~~~ 106 (231)
T 1vgw_A 35 TVLEHVLGIFERHEA--V-DLTVVVVSPEDTFAD----KVQTAFPQVRVWKN-GGQTRAETVRNGVAKLLETGLAAETDN 106 (231)
T ss_dssp EHHHHHHHHHHTCTT--C-CEEEEECCTTCSTHH----HHHHHCTTSEEECC-CCSSHHHHHHHHHHHHHHHSSSCTTSE
T ss_pred EHHHHHHHHHHcCCC--C-CeEEEEECccHHHHH----HHHhcCCCceEEEc-CCCcHHHHHHHHHHHHhhhccCCCCCE
Confidence 477788888654321 1 288877653333322 22221111222222 2346666666665544 4689
Q ss_pred EEEecCCccc
Q psy736 98 CPIIDVISDQ 107 (304)
Q Consensus 98 l~flD~D~~~ 107 (304)
++++++|.-+
T Consensus 107 vlv~~~D~p~ 116 (231)
T 1vgw_A 107 ILVHDAARCC 116 (231)
T ss_dssp EEECCTTCTT
T ss_pred EEEEcCCccc
Confidence 9999998644
No 50
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=21.95 E-value=1.6e+02 Score=24.50 Aligned_cols=20 Identities=10% Similarity=-0.032 Sum_probs=15.5
Q ss_pred ccccCCcEEEEecCCccccc
Q psy736 90 NRHKKTVVCPIIDVISDQTF 109 (304)
Q Consensus 90 ~~~A~gd~l~flD~D~~~~~ 109 (304)
.+...-|-+++||+|+.+..
T Consensus 91 ~~l~~~~~vlylD~D~~v~~ 110 (263)
T 3u2u_A 91 WSLTQYSKCVFMDADTLVLA 110 (263)
T ss_dssp GGCTTCSEEEEECTTEEECS
T ss_pred ccccCcceEEEEcCCEeecc
Confidence 34446789999999998764
No 51
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=21.32 E-value=3.3e+02 Score=23.64 Aligned_cols=87 Identities=2% Similarity=-0.167 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHh---cCCCCCcceEEEEeCCCCCCc------hHHHHHHhhccccceeeccc---CCCcH-HHHHhcc--
Q psy736 25 STLLRTVWSVIN---RSPRTLLKEIILVDDASERVV------CPIIDVISDQTFEYITASDM---TWGGF-NWKLREK-- 89 (304)
Q Consensus 25 ~~L~~~l~Sll~---qt~~~~~~EIIVVDdgS~d~t------~~ii~~~~~~~~~~i~~~~~---~~~G~-~~a~n~g-- 89 (304)
..|..||.+|.. +.+...+ =+|.+++-.+... .++-+.+.+.+...+..... ....+ ..+++.|
T Consensus 102 ~tL~~CL~~IK~WsdahPsh~P-ViI~LE~K~t~~~~~g~~p~~lDaeI~~vFGd~L~tPddvrG~~~TL~eAVla~GWP 180 (339)
T 3h4x_A 102 QDFAGCLSDMRAWHDAHPGHRP-ILLKIEMKDGFNAKGGRGPAEFDALIRQKLGDAVYGPGDLTGGHATADEAVRAGGWP 180 (339)
T ss_dssp CCHHHHHHHHHHHHHHSTTCCC-EEEEEEETTCCBGGGTBSHHHHHHHHHHHHGGGBCCHHHHHTTSSSHHHHHHHHCCC
T ss_pred cCHHHHHHHHHHHHHhCCCCCc-eEEEEecccCcccccCcCHHHHHHHHHHHhccceEcchhhcccccCHHHHHhcCCCC
Confidence 478999999854 3332221 3777887544222 12222333323222211110 01122 2344444
Q ss_pred -ccccCCcEEEEecCCcccccccc
Q psy736 90 -NRHKKTVVCPIIDVISDQTFEYI 112 (304)
Q Consensus 90 -~~~A~gd~l~flD~D~~~~~~~l 112 (304)
...++|.+|+.||....-..+++
T Consensus 181 Sl~slRGKVlf~Ld~Gtve~~np~ 204 (339)
T 3h4x_A 181 SRADLAGKFLFELIPGTVEEKNPF 204 (339)
T ss_dssp BTGGGTTCEEEEEEECTTGGGCSS
T ss_pred ChHHhCCCEEEEEeCCccccCCcc
Confidence 78899999999999876555444
No 52
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=20.91 E-value=1.8e+02 Score=26.48 Aligned_cols=86 Identities=9% Similarity=0.050 Sum_probs=44.4
Q ss_pred EEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCCCCchHHHHHHhhccccceee-cccCCCcHHHHHhccccccC
Q psy736 16 VIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASERVVCPIIDVISDQTFEYITA-SDMTWGGFNWKLREKNRHKK 94 (304)
Q Consensus 16 IIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~d~t~~ii~~~~~~~~~~i~~-~~~~~~G~~~a~n~g~~~A~ 94 (304)
.+|..|.+ .|...|+.+.+... .||+||=.--.+...+.+..........+.. ......|-+.|+..+...-.
T Consensus 34 l~pv~gkp--~i~~~l~~~~~~g~----~~i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~q~~~lGTa~Av~~a~~~l~ 107 (501)
T 3st8_A 34 LHTLAGRS--MLSHVLHAIAKLAP----QRLIVVLGHDHQRIAPLVGELADTLGRTIDVALQDRPLGTGHAVLCGLSALP 107 (501)
T ss_dssp GCEETTEE--HHHHHHHHHHHHCC----SEEEEEECTTHHHHHHHHHHHHHHHTSCCEEEECSSCCCHHHHHHHHHTTSC
T ss_pred HeEECChh--HHHHHHHHHHhCCC----CEEEEEeCCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCCcHHHHHHHHHHhc
Confidence 44555655 78888888766542 2888776543333222222222221111222 22234588888877765443
Q ss_pred C---cEEEEecCCccc
Q psy736 95 T---VVCPIIDVISDQ 107 (304)
Q Consensus 95 g---d~l~flD~D~~~ 107 (304)
. +.++++..|+.+
T Consensus 108 ~~~~~~~lvl~gd~~l 123 (501)
T 3st8_A 108 DDYAGNVVVTSGDTPL 123 (501)
T ss_dssp TTCCSEEEEEETTCTT
T ss_pred cccccceeeecCccee
Confidence 2 345566666543
No 53
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=20.23 E-value=3e+02 Score=21.13 Aligned_cols=45 Identities=16% Similarity=0.010 Sum_probs=35.1
Q ss_pred CCCCeEEEEEeeCCChHHHHHHHHHHHhcCCCCCcceEEEEeCCCC
Q psy736 9 FLPTTSIVIVFHNEAWSTLLRTVWSVINRSPRTLLKEIILVDDASE 54 (304)
Q Consensus 9 ~~p~vSIIIp~yN~~~~~L~~~l~Sll~qt~~~~~~EIIVVDdgS~ 54 (304)
.+.++.||.+-.-.+ .++...++.-.....+...+|++-|.|...
T Consensus 3 ~~Mki~ii~VGk~k~-~~~~~~i~eY~kRl~~~~~~ei~ei~~~k~ 47 (163)
T 4fak_A 3 EFMKITILAVGKLKE-KYWKQAIAEYEKRLGPYTKIDIIEVPDEKA 47 (163)
T ss_dssp SCCEEEEEEESCCCC-HHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred cccEEEEEEecCcCc-HHHHHHHHHHHHHccCcCCeEEEEeccccc
Confidence 467899999999888 888888888776655445679999988654
Done!