Query psy7363
Match_columns 552
No_of_seqs 132 out of 324
Neff 4.4
Searched_HMMs 29240
Date Sat Aug 17 00:49:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7363.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7363hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ex0_A Coagulation factor XIII 100.0 2E-177 7E-182 1458.2 28.8 480 9-512 175-655 (731)
2 1g0d_A Protein-glutamine gamma 100.0 5E-172 2E-176 1408.2 24.9 478 9-512 125-610 (695)
3 1vjj_A Protein-glutamine gluta 100.0 3E-169 9E-174 1388.8 25.9 478 10-511 126-618 (692)
4 2q3z_A Transglutaminase 2; tra 100.0 2E-152 7E-157 1256.3 19.1 472 10-511 131-611 (687)
5 2f4m_A Peptide N-glycanase; gl 98.6 3.3E-09 1.1E-13 108.0 0.1 52 145-254 139-190 (295)
6 3isr_A Transglutaminase-like e 98.1 5.5E-07 1.9E-11 91.3 2.1 59 145-256 177-235 (293)
7 1x3z_A Peptide: N-glycanase; h 97.8 3E-06 1E-10 87.6 -0.3 51 146-254 181-231 (335)
8 3kd4_A Putative protease; stru 96.8 0.00028 9.5E-09 76.0 1.4 65 145-256 283-347 (506)
9 3idu_A Uncharacterized protein 94.5 0.34 1.2E-05 43.5 11.3 83 369-468 15-97 (127)
10 2xzz_A Protein-glutamine gamma 93.5 0.04 1.4E-06 47.8 3.0 28 484-511 3-30 (102)
11 2qsf_A RAD4, DNA repair protei 90.9 0.04 1.4E-06 60.3 -0.3 25 146-172 160-184 (533)
12 3hrz_B Cobra venom factor; ser 86.6 17 0.00059 35.4 15.2 112 369-490 78-189 (252)
13 3isy_A Bsupi, intracellular pr 86.2 6.8 0.00023 35.0 10.9 103 371-484 5-119 (120)
14 2pn5_A TEP1R, thioester-contai 82.7 9.5 0.00033 45.3 13.3 109 371-488 664-774 (1325)
15 2hr0_B Complement C3 alpha' ch 82.0 8.6 0.0003 44.0 12.3 110 370-489 78-188 (915)
16 2b39_A C3; thioester, immune d 79.3 22 0.00076 43.4 15.2 110 371-490 826-936 (1661)
17 4fxk_B Complement C4-A alpha c 79.0 5.4 0.00018 44.5 9.1 108 370-489 151-259 (767)
18 4acq_A Alpha-2-macroglobulin; 77.2 14 0.00049 44.7 12.6 89 370-470 766-854 (1451)
19 1g4m_A Beta-arrestin1; sensory 72.7 47 0.0016 34.8 13.6 77 370-446 194-274 (393)
20 3es6_B Prolactin-inducible pro 71.4 34 0.0012 30.1 10.5 87 371-473 6-92 (118)
21 3prx_B Cobra venom factor; imm 71.3 37 0.0013 41.8 14.2 109 371-490 812-921 (1642)
22 2r39_A FIXG-related protein; s 67.1 60 0.0021 27.8 11.3 87 370-466 8-100 (118)
23 2x3c_A Toxic extracellular end 65.4 13 0.00044 38.3 7.5 118 372-497 23-155 (343)
24 2hly_A AGR_C_4178P, hypothetic 62.9 3.4 0.00012 40.1 2.3 17 128-144 40-57 (207)
25 2xzz_A Protein-glutamine gamma 59.5 50 0.0017 28.2 8.9 67 375-449 8-74 (102)
26 2icn_B Prolactin-inducible pro 56.9 52 0.0018 29.2 8.8 87 371-473 6-92 (118)
27 3qbt_B Inositol polyphosphate 55.6 8.2 0.00028 34.6 3.5 89 382-474 38-128 (140)
28 3vmn_A Dextranase; TIM barrel, 55.1 18 0.00063 40.5 6.8 67 384-457 19-91 (643)
29 2ys4_A Hydrocephalus-inducing 51.7 43 0.0015 28.6 7.3 61 381-453 35-95 (122)
30 2l0d_A Cell surface protein; s 50.1 59 0.002 28.5 8.0 68 371-448 3-71 (114)
31 3zyz_A Beta-D-glucoside glucoh 49.1 41 0.0014 37.9 8.5 65 386-452 612-677 (713)
32 1xf1_A C5A peptidase, SCP; hyd 47.3 33 0.0011 39.6 7.5 65 386-451 498-567 (926)
33 3cu7_A Complement C5; Mg domai 47.3 26 0.00089 42.8 7.0 90 371-466 821-915 (1676)
34 3ugu_A S-arrestin; arrestin fo 46.2 64 0.0022 34.0 8.8 78 370-447 210-291 (380)
35 2z1c_A Hydrogenase expression/ 42.3 7 0.00024 32.3 0.7 9 164-172 2-10 (75)
36 1yyc_A LEA protein, putative l 41.4 67 0.0023 30.1 7.4 118 335-456 3-129 (174)
37 2x41_A Beta-glucosidase; hydro 41.3 38 0.0013 38.0 6.7 64 386-453 614-681 (721)
38 3abz_A Beta-glucosidase I; gly 39.7 96 0.0033 35.6 9.8 63 386-452 734-801 (845)
39 2r51_A Vacuolar protein sortin 38.4 2.6E+02 0.009 28.7 11.9 102 385-486 46-155 (340)
40 1yew_A Particulate methane mon 37.7 2E+02 0.0068 30.3 10.8 110 369-479 246-372 (382)
41 3rfr_A PMOB; membrane, oxidore 35.8 1.5E+02 0.005 31.6 9.5 106 370-479 281-404 (419)
42 3d3r_A Hydrogenase assembly ch 35.3 9.9 0.00034 33.3 0.6 12 161-172 20-31 (103)
43 1suj_A CONE arrestin; sensory 35.1 4.2E+02 0.014 27.8 14.5 78 370-447 191-272 (392)
44 2ot2_A Hydrogenase isoenzymes 30.3 8.6 0.00029 32.8 -0.6 9 164-172 2-10 (90)
45 3but_A Uncharacterized protein 29.1 1.9E+02 0.0064 25.9 8.0 58 386-447 17-74 (136)
46 3qis_A Inositol polyphosphate 26.4 3.5E+02 0.012 27.6 10.5 91 382-478 41-135 (366)
47 1ny7_1 Cowpea mosaic virus, sm 21.2 41 0.0014 32.3 2.1 10 227-236 9-18 (189)
No 1
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=100.00 E-value=2e-177 Score=1458.15 Aligned_cols=480 Identities=35% Similarity=0.641 Sum_probs=460.9
Q ss_pred CCCCcEEEEeCCCCCCCccccCCcccccceeecCCeeEEEecCCCccccCCCCCCCchhHHHHHHHhhcccCCCCccCCC
Q psy7363 9 SHPDSMFILFNPWCPDDDVFLESEDERKEYVLSDTGLLYRGSYNRMRPAVWKYAQYEKDILECALYLATKVGEVGLHGTY 88 (552)
Q Consensus 9 ~~~~~~ylLFNPWc~dD~Vym~~E~~R~EYVLnd~G~Iy~Gs~~~i~~~pW~fGQFE~~iLd~cl~LLd~~~~~~~~~R~ 88 (552)
..+++|||||||||++|+|||+||++|+||||||+|+||+|++++|+++||||||||++||||||+|||+ ++++++.|+
T Consensus 175 ~~~~~f~lLFNPWc~~D~Vyl~~E~~R~EYVLnd~G~Iy~Gs~~~i~~~~WnfGQFE~~ILd~cl~lLd~-~~~~~~~r~ 253 (731)
T 1ex0_A 175 NPETDTYILFNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILDTCLYVMDR-AQMDLSGRG 253 (731)
T ss_dssp CGGGCEEEECCTTCTTSTTCCCCHHHHHHHTTCCEEEEEEEETTEEEEEEEECCTTSTTHHHHHHHHHHH-TTCCGGGTT
T ss_pred cCCCcEEEEECCCCCCCceecCChHHhCcEeecCceEEEeCCcCccccccccccccccchHHHHHHHhhh-cCCCcccCC
Confidence 3478999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CceeEEEeeehhhcCCCCCceeecCCCCCCCCCCCCCCCcccHHHHHHHHhCCCCccccceeeeeeeccccceeeccCCC
Q psy7363 89 DAVQVVRALSAAVNSPDDYGAVFGNWSMDFSGGTPPTKWVGSMKILQQFYTKKKPVKYGQCWVFSGVLTTGETCRTLEAP 168 (552)
Q Consensus 89 dPV~V~RvlSAmVNs~DD~GVL~GnWsg~Y~~G~~P~~W~GSv~IL~q~~~t~~PVkYGQCWVFAgV~~T~~vlR~LGIP 168 (552)
|||+|+|++|||||++||+|||.|||+++|++|++|+.|+||++||+||+++|+|||||||||||||||| +|||||||
T Consensus 254 dpv~v~r~lsa~vn~~dD~GVL~GnW~~~y~~g~~P~~~~gs~~il~~~~~~~~PV~~G~C~~fA~v~~~--~lR~lGIP 331 (731)
T 1ex0_A 254 NPIKVSRVGSAMVNAKDDEGVLVGSFDNIYAYGVPPSAWTGSVDILLEYRSSENPVRYGQCWVFAGVFNT--FLRCLGIP 331 (731)
T ss_dssp CHHHHHHHHHHHHBCSTTCSSEEECCSSCCTTSCCGGGCCBSHHHHHHHHHHTSCEEEECHHHHHHHHHH--HHHHHTCC
T ss_pred CHHHHHHHHHHHhhcCCcCceeecccccccCCCcCCcccCChHHHHHHHHhcCCccceeeehhHHHHHHH--HHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred cceeeecccCccccccccccccccccccCCCCCceeeeeecccCccccCCCCCceeeeeeeeeeeecccCCCCCCCCCeE
Q psy7363 169 NKDIIIIFVNPESLEKNLVVGVCYAAAHDTQSSLTVDYFVDEDGRVMEELNSDSIWNFHMWNEVWMTRRDLGTTDFNGWQ 248 (552)
Q Consensus 169 ~R~V~~~~~~~~~~~~~~~~~TNF~SAHDt~~nLtiD~y~de~G~~l~~~~~DSIWNFHVWnE~WM~RpDL~~~gy~GWQ 248 (552)
||+| |||.|||||++||+||+|||++|+.+...++||||||||||||||+|||||+ ||+|||
T Consensus 332 aRvV-----------------tgy~sa~d~~~~l~v~~~~~~~g~~~~~~~~dsIW~~H~W~E~w~~rpDLp~-g~~GWq 393 (731)
T 1ex0_A 332 ARIV-----------------TNYFSAHDNDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPV-GFGGWQ 393 (731)
T ss_dssp EEEE-----------------EEEEECCSCTTBCEEEEEECTTSCBCTTTCCCCCEEEEEEEEEEECCTTSCT-TCCEEE
T ss_pred eeEE-----------------cccccCCCCCCcceeeEEecccCccccccccCccceeeEEEEEeccccCCCC-CCCCeE
Confidence 9999 9999999999999999999999999998899999999999999999999999 999999
Q ss_pred EEcCCCCCcCCCeeeeccccceeeeeccccccCCCceEEEEEcCceEEEEEeCCCCceeEEeeccccccceeeeccCCCC
Q psy7363 249 VIDATPQELSGRKYQCGPTSVTAVKRGEVKIAYDGGFVFSEVNADKVFWRYNGPTQPLKLLRKDINGIGLALSTKAVGSW 328 (552)
Q Consensus 249 vlDaTPQE~S~G~y~CGPapV~AIKeG~v~~~YD~~FVFAEVNAD~v~W~~~~~g~~~~~~~~dt~~VG~~ISTKaVGs~ 328 (552)
++||||||+|+|+||||||||+|||+|+|+++||+||||||||||+|+|+++.+|. ++++++++++||++|||||||++
T Consensus 394 ~~DpTpqe~s~g~~~CGPasV~AIKeG~v~~~yD~pFVFAEVNAD~v~W~~~~dg~-~~~~~~~t~~VG~~ISTKaVG~d 472 (731)
T 1ex0_A 394 AVDSTPQENSDGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLIYITAKKDGT-HVVENVDATHIGKLIVTKQIGGD 472 (731)
T ss_dssp EEEEEEEECSSSEEEEEEEEHHHHHHTCTTSSSSHHHHHHHHHCEEEEEEECTTSC-EEEEEEECSSTTCEEEEECSSSS
T ss_pred EEcCCCccccCCccccCCcchhheeccccccCCCCCceEEEEcCceEEEEEcCCCc-eEEEeeccccccceEeccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999996 58999999999999999999999
Q ss_pred CccCCCcCCCCCCCCHHHHHHHHHHHHhhcccc-cccccccCCCceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEE
Q psy7363 329 TRKDITDNYKYEEKSEEERSSMLKALKQSASIF-SRYYLNEEFNDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVT 407 (552)
Q Consensus 329 ~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~-~~~~~~~~~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~ 407 (552)
+|||||++|||||||+|||+||+||.+++.+.. ....+.++.++|.|+|++ +++.+|+||+|+|.++|.|++. ++++
T Consensus 473 ~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~~~~~~~~~~~~~v~~~i~~-~~~~iG~df~v~l~~~N~s~~~-~~v~ 550 (731)
T 1ex0_A 473 GMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTSRSMKSRSNVDMDFEV-ENAVLGKDFKLSITFRNNSHNR-YTIT 550 (731)
T ss_dssp CEEECHHHHCCCTTSHHHHHHHHHHHTTTCBCCSCCCCC-----CEEEEEEE-CCCBTTCCEEEEEEEEECSSSC-EEEE
T ss_pred CcccccccCcCCCCCHHHHHHHHHHHhhcccccccccccccCCCCeEEEEec-CCCCCCCCEEEEEEEEECCCCC-EEEE
Confidence 999999999999999999999999999755432 222233456789999998 9999999999999999999999 9999
Q ss_pred EEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehhhhhccCCCCCcEEEEEEEEEccCCceEEEEEeEEEeCC
Q psy7363 408 VILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYEEYYKRLVDQADFNIACLATVHDTNFEYFAQDDFRVRKP 487 (552)
Q Consensus 408 ~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~d~~L~~P 487 (552)
+.++|++++|||+++.+||+++++++|+|+++++++++|+|++|+++|+||++||++|+|++++|++.+++|+||.|.+|
T Consensus 551 ~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~~~~~~~di~l~~P 630 (731)
T 1ex0_A 551 AYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIP 630 (731)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEEEEEEEEETTTCCEEEEEEEEECBCC
T ss_pred EEEEEEEEeeCCccccceeEeeEEEEECCCceEEEEEEECHHHHhhhccCCCEEEEEEEEEECCCCeEEEEEEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEeCCcccccceeeEEEeeccc
Q psy7363 488 DIRLKQLMKRFDRGNCNGGLITPTS 512 (552)
Q Consensus 488 ~l~I~v~g~~~V~k~~~~~~~~~~~ 512 (552)
+|+|+++|+++||++|.++|+|-..
T Consensus 631 ~l~I~v~g~~~v~~~l~v~vsf~NP 655 (731)
T 1ex0_A 631 EIIIKVRGTQVVGSDMTVTVQFTNP 655 (731)
T ss_dssp CCEEEEEECCBTTSCEEEEEEEECC
T ss_pred CEEEEeCCCcccCCeEEEEEEEECC
Confidence 9999999999999999999998543
No 2
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=100.00 E-value=4.7e-172 Score=1408.18 Aligned_cols=478 Identities=32% Similarity=0.598 Sum_probs=454.1
Q ss_pred CCCCcEEEEeCCCCCCCccccCCcccccceeecCCeeEEEecCCCccccCCCCCCCchhHHHHHHHhhcc------cCCC
Q psy7363 9 SHPDSMFILFNPWCPDDDVFLESEDERKEYVLSDTGLLYRGSYNRMRPAVWKYAQYEKDILECALYLATK------VGEV 82 (552)
Q Consensus 9 ~~~~~~ylLFNPWc~dD~Vym~~E~~R~EYVLnd~G~Iy~Gs~~~i~~~pW~fGQFE~~iLd~cl~LLd~------~~~~ 82 (552)
..+++|||||||||++|+|||+||++|+||||||+|+||+|++++|+++||+|||||++||||||+||++ |+.+
T Consensus 125 ~~~~~fylLFNPWc~~D~Vyl~~e~~r~EYvln~~G~i~~G~~~~i~~~pW~~gQFe~~ild~~l~lL~~~~~~~~~~~~ 204 (695)
T 1g0d_A 125 ADKISFHMLFNPWCRDDMVYLPDESKLQEYVMNEDGVIYMGTWDYIRSIPWNYGQFEDYVMDICFEVLDNSPAALKNSEM 204 (695)
T ss_dssp CCCEEEEEECCTTSTTSTTCCSCHHHHHHHTTCCEEEEEEEETTEEEEEEEECCTTSTTHHHHHHHHHHTSHHHHHCHHH
T ss_pred CCCccEEEEECCCCCCCceecCChHHhceEEEeceeEEccCchhhcCCCCccCceeeCCchhhhhHhhccCcccccCccc
Confidence 3578999999999999999999999999999999999999999999999999999999999999999998 3448
Q ss_pred CccCCCCceeEEEeeehhhcCCCCCceeecCCCCCCCCCCCCCCCcccHHHHHHHHhCC-CCccccceeeeeeeccccce
Q psy7363 83 GLHGTYDAVQVVRALSAAVNSPDDYGAVFGNWSMDFSGGTPPTKWVGSMKILQQFYTKK-KPVKYGQCWVFSGVLTTGET 161 (552)
Q Consensus 83 ~~~~R~dPV~V~RvlSAmVNs~DD~GVL~GnWsg~Y~~G~~P~~W~GSv~IL~q~~~t~-~PVkYGQCWVFAgV~~T~~v 161 (552)
+++.|+|||+|+|+||||||++||+|||.|||+++|++|++|+.|+||++||+||++++ +|||||||||||+|||| +
T Consensus 205 ~~~~r~dpv~v~r~lsa~vn~~dD~gvl~g~W~~~y~~g~~P~~w~gs~~il~~~~~~~~~PV~~G~C~~fA~v~~t--~ 282 (695)
T 1g0d_A 205 DIEHRSDPVYVGRTITAMVNSNGDRGVLTGRWEEPYTDGVAPYRWTGSVPILQQWSKAGVRPVKYGQCWVFAAVACT--V 282 (695)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTTCSEEECCSSCCTTSCCGGGCSBSHHHHHHHHHTTSCCEEEECHHHHHHHHHH--H
T ss_pred ccccCCCHHHHHHHHHHHhhccCcCceeecccccccCCCcCCcccCChHHHHHHHHHcCCCcccceeeHHHHHHHHH--H
Confidence 99999999999999999999999999999999999999999999999999999999998 99999999999999999 9
Q ss_pred eeccCCCcceeeecccCccccccccccccccccccCCCCCceeeeeecccCccccC-CCCCceeeeeeeeeeeecccCCC
Q psy7363 162 CRTLEAPNKDIIIIFVNPESLEKNLVVGVCYAAAHDTQSSLTVDYFVDEDGRVMEE-LNSDSIWNFHMWNEVWMTRRDLG 240 (552)
Q Consensus 162 lR~LGIP~R~V~~~~~~~~~~~~~~~~~TNF~SAHDt~~nLtiD~y~de~G~~l~~-~~~DSIWNFHVWnE~WM~RpDL~ 240 (552)
|||||||||+| |||.|||||++||+||+|||++|+.+.. .++||||||||||||||+|||||
T Consensus 283 lR~lGIPaR~V-----------------tgy~sa~d~~~nL~id~~~~~~g~~~~~~~~~dsiw~~HaW~E~w~~rpDLp 345 (695)
T 1g0d_A 283 LRCLGIPTRPI-----------------TNFASAHDVDGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLP 345 (695)
T ss_dssp HHHHTCCEEEE-----------------EEEEETTTTTTCSEEEEEECTTSCBSCTTCCBCSSEEEEEEEEEEECCTTSC
T ss_pred HHhCCCCeeEE-----------------ccccccCCCCCccceeeeecccCceecccccCCcceeeEEEEEeecccCCCC
Confidence 99999999999 9999999999999999999999999876 68999999999999999999999
Q ss_pred CCCCCCeEEEcCCCCCcCCCeeeeccccceeeeeccccccCCCceEEEEEcCceEEEEEeCCCCceeEEeecccccccee
Q psy7363 241 TTDFNGWQVIDATPQELSGRKYQCGPTSVTAVKRGEVKIAYDGGFVFSEVNADKVFWRYNGPTQPLKLLRKDINGIGLAL 320 (552)
Q Consensus 241 ~~gy~GWQvlDaTPQE~S~G~y~CGPapV~AIKeG~v~~~YD~~FVFAEVNAD~v~W~~~~~g~~~~~~~~dt~~VG~~I 320 (552)
+ ||+|||++||||||+|+|+||||||||+|||+|+|+++||+||||||||||+|+|+++++|.. +++++++++||++|
T Consensus 346 ~-~~~gWq~~DpTpqe~s~g~~~CGPa~v~aIkeG~v~~~yD~pFVFAEVNAD~v~W~~~~dg~~-~~~~~~t~~VG~~I 423 (695)
T 1g0d_A 346 E-GNDGWQVLDPTPQELSDGEFCCGPCPVAAIKEGNLGVKYDAPFVFAEVNADTIYWIVQKDGQR-RKITEDHASVGKNI 423 (695)
T ss_dssp T-TCCEEEEEECSCCTTSTTTCCEEEEEHHHHHHTCTTSTTTHHHHHHHHHCEEEEEEECTTSCE-EECEESSCCSSCCC
T ss_pred C-CCCCeEEEcCCCccccccccccCCCChhheecCcccCCCCCCceEEEEcCceEEEEEcCCCCe-EEEeeccCccCcEe
Confidence 9 999999999999999999999999999999999999999999999999999999999999996 88999999999999
Q ss_pred eeccCCCCCccCCCcCCCCCCCCHHHHHHHHHHHHhhcccccccccccCCCceEEEEEecCCCCCCCCEEEEEEEEeCCC
Q psy7363 321 STKAVGSWTRKDITDNYKYEEKSEEERSSMLKALKQSASIFSRYYLNEEFNDIKFDFELRDDIVIGSPFSVVVKMNNKSR 400 (552)
Q Consensus 321 STKaVGs~~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~ 400 (552)
||||||+++|||||++|||||||+|||+||+||.++...+ ... ....++|+|+|++.+.+ +|+||+|++.++|+|+
T Consensus 424 STKaVGsd~ReDIT~~YKypEGS~eER~v~~kA~~~~~~~-~~~--~~~~~~v~~~i~~~~~~-~G~df~v~v~~~N~s~ 499 (695)
T 1g0d_A 424 STKSVYGNHREDVTLHYKYPEGSQKEREVYKKAGRRVTEP-SNE--IAEQGRLQLSIKHAQPV-FGTDFDVIVEVKNEGG 499 (695)
T ss_dssp EEECSSSSCEEECHHHHCCCTTCHHHHHHHHHHTCCCC-------------CEEEEEEECCCB-TTCCEEEEEEEEECSS
T ss_pred EcccCCCCccccccccCCCCCCCHHHHHHHHHHHhhcccc-ccc--cCCCCCeEEEEEeCCCC-CCCCEEEEEEEEECCC
Confidence 9999999999999999999999999999999999876541 111 11357899999998999 9999999999999999
Q ss_pred CCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehhhhhccCCCCCcEEEEEEEEEccCCceEEEEE
Q psy7363 401 DQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYEEYYKRLVDQADFNIACLATVHDTNFEYFAQD 480 (552)
Q Consensus 401 ~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~ 480 (552)
+. +++++.++|++++|||+++.+||+++++++|+|+++++++++|+|++|+++|+||++||++|+|++++|++.+++|+
T Consensus 500 ~~-~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~~~~~~~ 578 (695)
T 1g0d_A 500 RD-AHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHYDDYVRCVSEHHLIRVKALLDAPGENGPIMTVA 578 (695)
T ss_dssp SC-EEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEEEEEEEECCC---EEEEEE
T ss_pred CC-EEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECHHHHhhhcccCCeEEEEEEEEECCCCeEEEEEE
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeCCCeEEEeCCcccccceeeEEEeeccc
Q psy7363 481 DFRVRKPDIRLKQLMKRFDRGNCNGGLITPTS 512 (552)
Q Consensus 481 d~~L~~P~l~I~v~g~~~V~k~~~~~~~~~~~ 512 (552)
||.|++|+|+|+++|++++|++|.++|+|-..
T Consensus 579 di~l~~P~l~I~v~g~~~v~~~l~a~vsf~NP 610 (695)
T 1g0d_A 579 NIPLSTPELLVQVPGKAVVWEPLTAYVSFTNP 610 (695)
T ss_dssp EEECBCCCCEEECCSCEETTCCEEEEEEEECC
T ss_pred EEEEcCCCEEEEeCCCcccCCeEEEEEEEECC
Confidence 99999999999999999999999999998543
No 3
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=100.00 E-value=2.5e-169 Score=1388.80 Aligned_cols=478 Identities=36% Similarity=0.639 Sum_probs=457.2
Q ss_pred CCCcEEEEeCCCCCCCccccCCcccccceeecCCeeEEEecCCCccccCCCCCCCchhHHHHHHHhhccc------CCCC
Q psy7363 10 HPDSMFILFNPWCPDDDVFLESEDERKEYVLSDTGLLYRGSYNRMRPAVWKYAQYEKDILECALYLATKV------GEVG 83 (552)
Q Consensus 10 ~~~~~ylLFNPWc~dD~Vym~~E~~R~EYVLnd~G~Iy~Gs~~~i~~~pW~fGQFE~~iLd~cl~LLd~~------~~~~ 83 (552)
.+++|||||||||++|+|||+||++|+||||||+|+||+|++++|+++||+|||||++||||||+|||+. +.++
T Consensus 126 ~~~~f~lLFNPWc~~D~Vyl~~e~~r~eYvln~~G~i~~G~~~~i~~~~W~~gQfe~~il~~~l~lL~~~~~~~~~~~~~ 205 (692)
T 1vjj_A 126 KLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQFEEDILSICLSILDRSLNFRRDAATD 205 (692)
T ss_dssp EEEEEEEECCTTSTTSTTCCCCHHHHHHHHTCCEEEEEEEETTEEEEEEEECCTTSTTHHHHHHHHHTTSHHHHHCHHHH
T ss_pred cCCcEEEEECCCCCCCceecCCHHHhheEEEeceeEeccCcccccccCCccccccCCCchhhhHHHhhcCcccccCcccc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999983 4489
Q ss_pred ccCCCCceeEEEeeehhhcCCCCCceeecCCCCCCCCCCCCCCCcccHHHHHHHHhCC-CCccccceeeeeeecccccee
Q psy7363 84 LHGTYDAVQVVRALSAAVNSPDDYGAVFGNWSMDFSGGTPPTKWVGSMKILQQFYTKK-KPVKYGQCWVFSGVLTTGETC 162 (552)
Q Consensus 84 ~~~R~dPV~V~RvlSAmVNs~DD~GVL~GnWsg~Y~~G~~P~~W~GSv~IL~q~~~t~-~PVkYGQCWVFAgV~~T~~vl 162 (552)
++.|+|||+|+|+||||||++||+|||.|||+++|.+|++|+.|+||++||+||++++ +||||||||+||+|+|| +|
T Consensus 206 ~~~r~dpv~v~r~lsa~vn~~~d~gvl~g~w~~~y~~g~~P~~~~gs~~il~~~~~~~~~PV~~G~C~~fA~~~~~--~l 283 (692)
T 1vjj_A 206 VASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTYTGGRDPRSWNGSVEILKNWKKSGLSPVRYGQCWVFAGTLNT--AL 283 (692)
T ss_dssp HHGGGCHHHHHHHHHHHTBCTTTTCSEEECCSSCCTTSCCGGGCCBSHHHHHHHHHTTSCCEEEECHHHHHHHHHH--HH
T ss_pred cccCCCHHHHHHHHHHHhhccCccceeecccccccCCCcCCcccCChHHHHHHHHHcCCCcccceeeHHHHHHHHH--HH
Confidence 9999999999999999999999999999999999999999999999999999999998 99999999999999999 99
Q ss_pred eccCCCcceeeecccCccccccccccccccccccCCCCCceeeeeecccCccccCCCCCceeeeeeeeeeeecccCCCCC
Q psy7363 163 RTLEAPNKDIIIIFVNPESLEKNLVVGVCYAAAHDTQSSLTVDYFVDEDGRVMEELNSDSIWNFHMWNEVWMTRRDLGTT 242 (552)
Q Consensus 163 R~LGIP~R~V~~~~~~~~~~~~~~~~~TNF~SAHDt~~nLtiD~y~de~G~~l~~~~~DSIWNFHVWnE~WM~RpDL~~~ 242 (552)
||||||||+| |||.||||+++||++|+|||+.|+.+.. ++|||||||+||||||.|||||+
T Consensus 284 R~lGIPaR~V-----------------tgy~s~~d~~~nL~~d~~~~~~g~~~~~-~~dsIW~~HaW~E~w~~rpDLp~- 344 (692)
T 1vjj_A 284 RSLGIPSRVI-----------------TNFNSAHDTDRNLSVDVYYDPMGNPLDK-GSDSVWNFHVWNEGWFVRSDLGP- 344 (692)
T ss_dssp HHHTCCEEEE-----------------EEEEEEECSSSSSEEEEEECTTSCBCCC-CSCEEEEEEEEEEEEECCTTTCG-
T ss_pred HhCCCCeeEE-----------------cccccccCCCCCcccceeeccCCccccc-ccccccceeEEEEEeccccCCCC-
Confidence 9999999999 9999999999999999999999999987 89999999999999999999999
Q ss_pred CCCCeEEEcCCCCCcCCCeeeeccccceeeeeccccccCCCceEEEEEcCceEEEEEeC-CCCceeEEeeccccccceee
Q psy7363 243 DFNGWQVIDATPQELSGRKYQCGPTSVTAVKRGEVKIAYDGGFVFSEVNADKVFWRYNG-PTQPLKLLRKDINGIGLALS 321 (552)
Q Consensus 243 gy~GWQvlDaTPQE~S~G~y~CGPapV~AIKeG~v~~~YD~~FVFAEVNAD~v~W~~~~-~g~~~~~~~~dt~~VG~~IS 321 (552)
||+|||++||||||.|+|+||||||||+|||+|+|+++||+||||||||||+|+|++++ +|.. ++++.++++||++||
T Consensus 345 ~~~gW~~~DpT~~~~s~g~~~CGPa~v~aikeG~v~~~yD~pFvFAEVNAD~v~W~~~~~dg~~-~~~~~~t~~VG~~IS 423 (692)
T 1vjj_A 345 SYGGWQVLDATPQERSQGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQ-WKNSVNSHTIGRYIS 423 (692)
T ss_dssp GGCEEEEECCSCSSCBTTBSCCCCEEHHHHHHTCTTSTTTHHHHHHHHHCEEEEEEEETTTTEE-EEEEEESSSSSEEEE
T ss_pred CCCCEEEECCCCCCccccccccCCcCHhHhccCccccCCCCCceEEEEccccEEEEEecCCCce-eEEecccCcCCcEee
Confidence 99999999999999999999999999999999999999999999999999999999877 8885 889999999999999
Q ss_pred eccCCCCCccCCCcCCCCCCCCHHHHHHHHHHHHhhcccc--cc-ccc----ccCCCceEEEEEecCCCCCCCCEEEEEE
Q psy7363 322 TKAVGSWTRKDITDNYKYEEKSEEERSSMLKALKQSASIF--SR-YYL----NEEFNDIKFDFELRDDIVIGSPFSVVVK 394 (552)
Q Consensus 322 TKaVGs~~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~--~~-~~~----~~~~~~v~~~i~~~~~~~iG~Df~l~v~ 394 (552)
|||||+++|||||++|||||||+|||+||+||.++...+. .. ... +++.++|+|+|++.+++.+|+||+|+|.
T Consensus 424 TKaVG~d~ReDIT~~YKypEGS~eER~v~~kA~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~G~df~v~l~ 503 (692)
T 1vjj_A 424 TKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEPSIIGKLKVAGMLAVGKEVNLVLL 503 (692)
T ss_dssp EECTTSSCEEECHHHHSCCTTSHHHHHHHHHHHHHHCC-----------------CCSEEEEEEECSCCBTTSCEEEEEE
T ss_pred cCCCCCCchhcccccCCCCCCCHHHHHHHHHHHHhccccccccccccccccccccCCCeEEEEEcCCCCCCCCCEEEEEE
Confidence 9999999999999999999999999999999999875432 11 111 1146789999999999999999999999
Q ss_pred EEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehhhhhccCCCCCcEEEEEEEEEccCCc
Q psy7363 395 MNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYEEYYKRLVDQADFNIACLATVHDTNF 474 (552)
Q Consensus 395 l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~eY~~~L~d~~~i~v~a~a~v~et~~ 474 (552)
++|.|++. ++++++++|++++|||+++.+||+++++++|+|+++++++++|+|++|+++|+||++||++|+|++++|++
T Consensus 504 ~~N~s~~~-~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~ 582 (692)
T 1vjj_A 504 LKNLSRDT-KTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISYAQYERYLKSDNMIRITAVCKVPDESE 582 (692)
T ss_dssp EEECSSSC-EEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECHHHHHTTCCTTCEEEEEEEEECTTSCC
T ss_pred EEECCCCC-EEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECHHHHhhhcccCCeEEEEEEEEECCCce
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeEEEeCCCeEEEeCCcccccceeeEEEeecc
Q psy7363 475 EYFAQDDFRVRKPDIRLKQLMKRFDRGNCNGGLITPT 511 (552)
Q Consensus 475 ~~~a~~d~~L~~P~l~I~v~g~~~V~k~~~~~~~~~~ 511 (552)
+++|+||.|.+|+|+|+++|+++||++|.++|+|-.
T Consensus 583 -~~~~~di~l~~P~l~I~v~g~~~v~~~l~v~v~f~N 618 (692)
T 1vjj_A 583 -VVVERDIILDNPTLTLEVLNEARVRKPVNVQMLFSN 618 (692)
T ss_dssp -EEEEEEEECBCCCEEEEECSCCBTTSCEEEEEEEEC
T ss_pred -EEEEEEEEEcCCCEEEEeCCCcccCCeEEEEEEEEC
Confidence 999999999999999999999999999999999854
No 4
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=100.00 E-value=2e-152 Score=1256.26 Aligned_cols=472 Identities=33% Similarity=0.619 Sum_probs=436.4
Q ss_pred CCCcEEEEeCCCCCCCccccCCcccccceeecCCeeEEEecCCCccccCCCCCCCchhHHHHHHHhhcc------cCCCC
Q psy7363 10 HPDSMFILFNPWCPDDDVFLESEDERKEYVLSDTGLLYRGSYNRMRPAVWKYAQYEKDILECALYLATK------VGEVG 83 (552)
Q Consensus 10 ~~~~~ylLFNPWc~dD~Vym~~E~~R~EYVLnd~G~Iy~Gs~~~i~~~pW~fGQFE~~iLd~cl~LLd~------~~~~~ 83 (552)
.+++|||||||||++|+|||+||++|+||||||+|+||+|++++|+++||+|||||++||||||+||++ |++++
T Consensus 131 ~~~~f~lLFNPWc~~D~Vyl~~e~~r~eYvln~~G~i~~G~~~~i~~~~W~~gQfe~~il~~~l~~L~~~~~~~~~~~~~ 210 (687)
T 2q3z_A 131 VLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQFQDGILDICLILLDVNPKFLKNAGRD 210 (687)
T ss_dssp EEEEEEEECCTTCTTSTTCCSCHHHHHHHTTCCEEEEEEECSSSEEEEEEECCTTSTTHHHHHHHHHHTSHHHHHCHHHH
T ss_pred CCCcEEEEeCCCCCCCceECCChHHhceEEEeceEEeccccccccccCCccccccCCCchhhhhHhhccCcccccCcccc
Confidence 478999999999999999999999999999999999999999999999999999999999999999997 34689
Q ss_pred ccCCCCceeEEEeeehhhcCCCCCceeecCCCCCCCCCCCCCCCcccHHHHHHHHhCC-CCccccceeeeeeecccccee
Q psy7363 84 LHGTYDAVQVVRALSAAVNSPDDYGAVFGNWSMDFSGGTPPTKWVGSMKILQQFYTKK-KPVKYGQCWVFSGVLTTGETC 162 (552)
Q Consensus 84 ~~~R~dPV~V~RvlSAmVNs~DD~GVL~GnWsg~Y~~G~~P~~W~GSv~IL~q~~~t~-~PVkYGQCWVFAgV~~T~~vl 162 (552)
++.|+||++|+|+||||||++||+|||.|||+++|++|++|++|+||++||++|+++| +||||||||+||++||+ +|
T Consensus 211 ~~~r~dPv~v~r~lsa~vn~~~d~gvl~g~w~~~y~~g~~p~~~~gs~~il~~~~~~~~~~~k~G~C~dfA~~~~~--ll 288 (687)
T 2q3z_A 211 CSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNNYGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACT--VL 288 (687)
T ss_dssp HHHTTCHHHHHHHHHHTTTCTTTTSSEEECCSSCCTTSCCTTTCCBSHHHHHHHHHTTTCCEEEECHHHHHHHHHH--HH
T ss_pred cccCCCHHHHHHHHHHHhhcccccceEeeccccCcCCCCCCccccCchHHHHHHHhcCCCccceeehHHHHHHHHH--HH
Confidence 9999999999999999999999999999999999999999999999999999999998 99999999999999999 99
Q ss_pred eccCCCcceeeecccCccccccccccccccccccCCCCCceeeeeecccCccccCCCCCceeeeeeeeeeeecccCCCCC
Q psy7363 163 RTLEAPNKDIIIIFVNPESLEKNLVVGVCYAAAHDTQSSLTVDYFVDEDGRVMEELNSDSIWNFHMWNEVWMTRRDLGTT 242 (552)
Q Consensus 163 R~LGIP~R~V~~~~~~~~~~~~~~~~~TNF~SAHDt~~nLtiD~y~de~G~~l~~~~~DSIWNFHVWnE~WM~RpDL~~~ 242 (552)
||||||||+| |+|.+|||||++|++|+|+|++|+.+.. +.|+|||||+|+|+||.|||||+
T Consensus 289 RalGIPAR~V-----------------sGy~~~~~~~~~l~~d~~~~~~g~~~~~-~~d~~~~~HAW~Ev~~~rpDLp~- 349 (687)
T 2q3z_A 289 RCLGIPTRVV-----------------TNYNSAHDQNSNLLIEYFRNEFGEIQGD-KSEMIWNFHCWVESWMTRPDLQP- 349 (687)
T ss_dssp HHHTCCEEEE-----------------EEEEEECC--CCHHHHHHHC----------CCCCBSEEEEEEEEECCTTSST-
T ss_pred HhCCCCcEEE-----------------eecccccccccccccccccCCCCceeee-cCCcccceeEEEEEEcccCCCCC-
Confidence 9999999999 9999999999999999999999988655 78999999999999999999999
Q ss_pred CCCCeEEEcCCCCCcCCCeeeeccccceeeeeccccccCCCceEEEEEcCceEEEEEeCCCCceeEEeecccc-ccceee
Q psy7363 243 DFNGWQVIDATPQELSGRKYQCGPTSVTAVKRGEVKIAYDGGFVFSEVNADKVFWRYNGPTQPLKLLRKDING-IGLALS 321 (552)
Q Consensus 243 gy~GWQvlDaTPQE~S~G~y~CGPapV~AIKeG~v~~~YD~~FVFAEVNAD~v~W~~~~~g~~~~~~~~dt~~-VG~~IS 321 (552)
||+|||++||||||.|+|.|+||||||+|||+|+++++||++|||||||||+++|++.++|.. + +..++++ ||++||
T Consensus 350 g~~GW~~~DpT~~~~~~g~~~~gpapv~aik~G~~~~~~d~~f~faevna~~~~w~~~~~g~~-~-~~~~~~~~VG~~IS 427 (687)
T 2q3z_A 350 GYEGWQALDPTPQEKSEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQDDGSV-H-KSINRSLIVGLKIS 427 (687)
T ss_dssp TCCEEEEECCSSCCCSSSSSCSCCEEHHHHHTTCTTSTTTHHHHHHHHCCEEEEECC---------CEECCSEEEEEEEE
T ss_pred CCCCEEEECCCCCcccccccccCCCChhheecCCcccCCCcceEEEEecccceEEEEeCCCce-E-EecCCccccCcEeE
Confidence 999999999999999999999999999999999999999999999999999999998888885 5 8899999 999999
Q ss_pred eccCCCCCccCCCcCCCCCCCCHHHHHHHHHHHHhhcccccccccccCCCceEEEEEecCCCCCCCCEEEEEEEEeCCCC
Q psy7363 322 TKAVGSWTRKDITDNYKYEEKSEEERSSMLKALKQSASIFSRYYLNEEFNDIKFDFELRDDIVIGSPFSVVVKMNNKSRD 401 (552)
Q Consensus 322 TKaVGs~~ReDIT~~YKypEGS~eER~~~~kA~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~ 401 (552)
|||||+++|||||++|||||||+|||+||+||.++...+ +. +.++|+|+|++.+.+.+|+||+|.|.++|.|++
T Consensus 428 TKavG~d~reDIT~~YKypEGS~eER~v~~kA~~~~~~~-----~~-~~~~v~~~~~~~~~~~~G~df~v~v~~~N~s~~ 501 (687)
T 2q3z_A 428 TKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKLA-----EK-EETGMAMRIRVGQSMNMGSDFDVFAHITNNTAE 501 (687)
T ss_dssp EECTTSSSEEECHHHHCCCTTCHHHHHHHHHHHC----------------CEEEEEECCSCCBTTCCEEEEEEEEECSSS
T ss_pred cCCCCCCCcccccccCCCCCCCHHHHHHHHHHHHhcccc-----cC-CCCceEEEEEeCCCCcCCCCEEEEEEEEECCCC
Confidence 999999999999999999999999999999999976433 11 257899999999999999999999999999999
Q ss_pred CceEEEEEEEEEEEeEcCccccce-eeEeeEEEEcCCCEEEEEEEEehhhhhccCCCCCcEEEEEEEEEccCCceEEEEE
Q psy7363 402 QDYTVTVILRVDAVTYTGKVGDSV-KKTKEDVVVKRGKSEEIVLHVSYEEYYKRLVDQADFNIACLATVHDTNFEYFAQD 480 (552)
Q Consensus 402 ~~r~v~~~l~a~~v~YtG~~~~~~-~~~~~~v~L~p~e~~~v~l~I~y~eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~ 480 (552)
. ++|+++++|++++|||+++.+| |+++++++|+|+++++++++|+|++|+++|+||++||++|+|++++|++.+++|+
T Consensus 502 ~-~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~~~~~~~ 580 (687)
T 2q3z_A 502 E-YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAER 580 (687)
T ss_dssp C-EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECHHHHTTTCCTTCEEEEEEEEEETTTTEEEEEEE
T ss_pred C-EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECHHHHhhhccCCCEEEEEEEEEECCCCeEEEEEE
Confidence 9 9999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeCCCeEEEeCCcccccceeeEEEeecc
Q psy7363 481 DFRVRKPDIRLKQLMKRFDRGNCNGGLITPT 511 (552)
Q Consensus 481 d~~L~~P~l~I~v~g~~~V~k~~~~~~~~~~ 511 (552)
||.|.+|+|+|+++|+++||++|.++|+|-.
T Consensus 581 di~l~~P~l~I~v~g~~~v~~~~~v~v~f~N 611 (687)
T 2q3z_A 581 DLYLENPEIKIRILGEPKQKRKLVAEVSLQN 611 (687)
T ss_dssp EEECBCCCCEEEEESCCSSSSCEEEEEEEEC
T ss_pred EEEEeCCCEEEEeCCCcccCCeEEEEEEEEC
Confidence 9999999999999999999999999999854
No 5
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=98.64 E-value=3.3e-09 Score=108.03 Aligned_cols=52 Identities=27% Similarity=0.558 Sum_probs=47.4
Q ss_pred cccceeeeeeeccccceeeccCCCcceeeecccCccccccccccccccccccCCCCCceeeeeecccCccccCCCCCcee
Q psy7363 145 KYGQCWVFSGVLTTGETCRTLEAPNKDIIIIFVNPESLEKNLVVGVCYAAAHDTQSSLTVDYFVDEDGRVMEELNSDSIW 224 (552)
Q Consensus 145 kYGQCWVFAgV~~T~~vlR~LGIP~R~V~~~~~~~~~~~~~~~~~TNF~SAHDt~~nLtiD~y~de~G~~l~~~~~DSIW 224 (552)
+.|.|.-||.++++ +||++|||||.| ++|
T Consensus 139 r~G~C~d~A~lf~a--l~Ra~GIpAR~V-----------------~Gy-------------------------------- 167 (295)
T 2f4m_A 139 RCGRCGEWANCFTL--CCRALGFEARYV-----------------WDY-------------------------------- 167 (295)
T ss_dssp CEESHHHHHHHHHH--HHHHTTCCEEEE-----------------EET--------------------------------
T ss_pred CCEeeHHHHHHHHH--HHHHCCCCEEEE-----------------cCC--------------------------------
Confidence 46999999999999 999999999999 887
Q ss_pred eeeeeeeeeecccCCCCCCCCCeEEEcCCC
Q psy7363 225 NFHMWNEVWMTRRDLGTTDFNGWQVIDATP 254 (552)
Q Consensus 225 NFHVWnE~WM~RpDL~~~gy~GWQvlDaTP 254 (552)
.+|+|+|+|+. |..||..+|||+
T Consensus 168 ~~HaW~Evy~~-------g~~gWv~~Dpt~ 190 (295)
T 2f4m_A 168 TDHVWTEVYSP-------SQQRWLHCDACE 190 (295)
T ss_dssp TTEEEEEEEET-------TTTEEEEEETTT
T ss_pred CCEEEEEEEEC-------CCCeEEEEeCCc
Confidence 58999999993 457999999996
No 6
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=98.14 E-value=5.5e-07 Score=91.28 Aligned_cols=59 Identities=27% Similarity=0.476 Sum_probs=48.4
Q ss_pred cccceeeeeeeccccceeeccCCCcceeeecccCccccccccccccccccccCCCCCceeeeeecccCccccCCCCCcee
Q psy7363 145 KYGQCWVFSGVLTTGETCRTLEAPNKDIIIIFVNPESLEKNLVVGVCYAAAHDTQSSLTVDYFVDEDGRVMEELNSDSIW 224 (552)
Q Consensus 145 kYGQCWVFAgV~~T~~vlR~LGIP~R~V~~~~~~~~~~~~~~~~~TNF~SAHDt~~nLtiD~y~de~G~~l~~~~~DSIW 224 (552)
+.|-|==||.++.. +||++|||||.| +.|...- + . .
T Consensus 177 ~~G~C~d~A~l~va--l~Ra~GIPAR~V-----------------sGy~~~~---------------~----~------~ 212 (293)
T 3isr_A 177 RAGVCRDFAHLGIA--LCRALSIPARYF-----------------TGYAFKL---------------N----P------P 212 (293)
T ss_dssp CEECHHHHHHHHHH--HHHHTTCCEEEE-----------------EEEETTC---------------S----S------C
T ss_pred CcEehHHHHHHHHH--HHHHCCCCEEEE-----------------EEECCCC---------------C----C------C
Confidence 46999999999999 999999999999 8875321 0 0 1
Q ss_pred eeeeeeeeeecccCCCCCCCCCeEEEcCCCCC
Q psy7363 225 NFHMWNEVWMTRRDLGTTDFNGWQVIDATPQE 256 (552)
Q Consensus 225 NFHVWnE~WM~RpDL~~~gy~GWQvlDaTPQE 256 (552)
.+|.|+|+|+. | ||-.+|||+--
T Consensus 213 ~~HAW~Evyl~-------g--gWv~~DpT~~~ 235 (293)
T 3isr_A 213 DFHACFEAYIG-------G--NWIIFDATRLV 235 (293)
T ss_dssp CEEEEEEEEET-------T--EEEEECTTCCS
T ss_pred CeEEEEEEEEC-------C--cEEEEECCCCC
Confidence 49999999983 4 99999999753
No 7
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=97.78 E-value=3e-06 Score=87.60 Aligned_cols=51 Identities=18% Similarity=0.375 Sum_probs=44.3
Q ss_pred ccceeeeeeeccccceeeccCCCcceeeecccCccccccccccccccccccCCCCCceeeeeecccCccccCCCCCceee
Q psy7363 146 YGQCWVFSGVLTTGETCRTLEAPNKDIIIIFVNPESLEKNLVVGVCYAAAHDTQSSLTVDYFVDEDGRVMEELNSDSIWN 225 (552)
Q Consensus 146 YGQCWVFAgV~~T~~vlR~LGIP~R~V~~~~~~~~~~~~~~~~~TNF~SAHDt~~nLtiD~y~de~G~~l~~~~~DSIWN 225 (552)
=|.|=-||.+++. +|||||||||.| .|+ -
T Consensus 181 ~G~C~e~A~lF~~--llRalGi~aR~V-----------------~~~--------------------------------~ 209 (335)
T 1x3z_A 181 KGRCGEWCNLFTL--ILKSFGLDVRYV-----------------WNR--------------------------------E 209 (335)
T ss_dssp EECHHHHHHHHHH--HHHTTTCCEEEE-----------------EET--------------------------------T
T ss_pred CcChHHHHHHHHH--HHHHCCCCeEEE-----------------ecC--------------------------------C
Confidence 4999999999999 999999999999 542 2
Q ss_pred eeeeeeeeecccCCCCCCCCCeEEEcCCC
Q psy7363 226 FHMWNEVWMTRRDLGTTDFNGWQVIDATP 254 (552)
Q Consensus 226 FHVWnE~WM~RpDL~~~gy~GWQvlDaTP 254 (552)
-|+|+|+|. + +-.||.-+|||=
T Consensus 210 ~H~W~EV~~------~-~~~rWv~vDp~~ 231 (335)
T 1x3z_A 210 DHVWCEYFS------N-FLNRWVHVDSCE 231 (335)
T ss_dssp TEEEEEEEE------T-TTTEEEEEETTT
T ss_pred CcEEEEEEE------C-CCCCEEEECCCC
Confidence 499999998 3 568999999983
No 8
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=96.82 E-value=0.00028 Score=76.03 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=47.2
Q ss_pred cccceeeeeeeccccceeeccCCCcceeeecccCccccccccccccccccccCCCCCceeeeeecccCccccCCCCCcee
Q psy7363 145 KYGQCWVFSGVLTTGETCRTLEAPNKDIIIIFVNPESLEKNLVVGVCYAAAHDTQSSLTVDYFVDEDGRVMEELNSDSIW 224 (552)
Q Consensus 145 kYGQCWVFAgV~~T~~vlR~LGIP~R~V~~~~~~~~~~~~~~~~~TNF~SAHDt~~nLtiD~y~de~G~~l~~~~~DSIW 224 (552)
+||.|--+|.++++ +||++|||||+| .-+ + ...|.... .-.++
T Consensus 283 ~~G~C~d~a~Ll~A--llRa~GIpA~~v-----------------~~~--t-------------~~~~~~~~--~lp~~- 325 (506)
T 3kd4_A 283 AYGTPLEIAQLLNV--MLNAAGIPSEVL-----------------AVY--P-------------GHLDTDAC--GLAAI- 325 (506)
T ss_dssp TEECHHHHHHHHHH--HHHHTTCCEEEE-----------------EEE--E-------------TTSCGGGC--CSTTC-
T ss_pred CCcchHHHHHHHHH--HHHHCCCCcEEE-----------------EEE--c-------------CCCCCccC--CCCCC-
Confidence 38999999999999 999999999999 222 1 11221111 12344
Q ss_pred eeeeeeeeeecccCCCCCCCCCeEEEcCCCCC
Q psy7363 225 NFHMWNEVWMTRRDLGTTDFNGWQVIDATPQE 256 (552)
Q Consensus 225 NFHVWnE~WM~RpDL~~~gy~GWQvlDaTPQE 256 (552)
+|||.+++.. |.|.-+|||...
T Consensus 326 -nh~i~~v~~~---------g~~y~lDat~~~ 347 (506)
T 3kd4_A 326 -QTLAVKATVD---------GKDQYLSASPLT 347 (506)
T ss_dssp -CEEEEEEEET---------TEEEEESSSCHH
T ss_pred -CEEEEEEEEC---------CEEEEEecCCcc
Confidence 9999999852 789999998443
No 9
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=94.51 E-value=0.34 Score=43.50 Aligned_cols=83 Identities=12% Similarity=0.126 Sum_probs=60.1
Q ss_pred CCCceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEeh
Q psy7363 369 EFNDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSY 448 (552)
Q Consensus 369 ~~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y 448 (552)
+.+|+.+++...+.+..|+.+.+.++++|.........++.+.+ +|... ....+.|.|++++.+.+.+..
T Consensus 15 ~~pDL~V~is~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyv-----ng~~v-----~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 15 EFPDLTVEIKGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYI-----NGTLY-----KNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp SSCCEEEEEESCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEE-----TTEEE-----EEEEEEECTTCEEEEEEEECC
T ss_pred cCCCeEEEecCCCcccCCCEEEEEEEEEECCCCccCCcEEEEEE-----CCEEE-----eeEEeccCCCCeEEEEEEEEc
Confidence 56888888887777889999999999999998774556655543 55433 233668999999999888763
Q ss_pred hhhhccCCCCCcEEEEEEEE
Q psy7363 449 EEYYKRLVDQADFNIACLAT 468 (552)
Q Consensus 449 ~eY~~~L~d~~~i~v~a~a~ 468 (552)
. ..+...|.|.+.
T Consensus 85 ~-------~~G~~~v~AvVD 97 (127)
T 3idu_A 85 T-------QEGMYRINATVD 97 (127)
T ss_dssp S-------SCEEEEEEEEES
T ss_pred C-------CCcEEEEEEEEc
Confidence 2 244556666543
No 10
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=93.49 E-value=0.04 Score=47.83 Aligned_cols=28 Identities=11% Similarity=0.085 Sum_probs=23.7
Q ss_pred EeCCCeEEEeCCcccccceeeEEEeecc
Q psy7363 484 VRKPDIRLKQLMKRFDRGNCNGGLITPT 511 (552)
Q Consensus 484 L~~P~l~I~v~g~~~V~k~~~~~~~~~~ 511 (552)
+.+|+|+|+++|++++|++|.++|+|-.
T Consensus 3 ~~~P~i~I~v~g~~~v~~~l~v~vsf~N 30 (102)
T 2xzz_A 3 YFQSMLSLTLLGAAVVGQECEVQIVFKN 30 (102)
T ss_dssp ---CEEEEEESSCCCSSSCEEEEEEEEC
T ss_pred ccCCcEEEEECCCcccCCeEEEEEEEEC
Confidence 5789999999999999999999999854
No 11
>2qsf_A RAD4, DNA repair protein RAD4; alpha-beta structure, beta hairpin, transglutaminase fold, DNA-damage recognition, DNA repair; HET: DNA; 2.35A {Saccharomyces cerevisiae} PDB: 2qsg_A* 2qsh_A*
Probab=90.89 E-value=0.04 Score=60.32 Aligned_cols=25 Identities=12% Similarity=-0.013 Sum_probs=23.7
Q ss_pred ccceeeeeeeccccceeeccCCCccee
Q psy7363 146 YGQCWVFSGVLTTGETCRTLEAPNKDI 172 (552)
Q Consensus 146 YGQCWVFAgV~~T~~vlR~LGIP~R~V 172 (552)
-|.|=+.|-.+|. +|||||++||.|
T Consensus 160 ~Gs~d~~AqlF~a--LlRalG~~aRlV 184 (533)
T 2qsf_A 160 HGDPDISVQGFVA--MLRACNVNARLI 184 (533)
T ss_dssp EECHHHHHHHHHH--HHHHTTCCEEEE
T ss_pred CCChhHHHHHHHH--HHHHCCCceEEE
Confidence 3999999999999 999999999999
No 12
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=86.62 E-value=17 Score=35.45 Aligned_cols=112 Identities=12% Similarity=0.154 Sum_probs=72.5
Q ss_pred CCCceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEeh
Q psy7363 369 EFNDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSY 448 (552)
Q Consensus 369 ~~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y 448 (552)
...++.+++.+--.+.-|+-|.|.++|.|..... ..+++.+.... .|.-.... -...++.+.|.+++.+.+.+.|.+
T Consensus 78 v~kpffv~~~LP~sv~rGE~~~l~~~V~Ny~~~~-~~v~V~l~~~~-~~~~~~~~-~~~~~~~v~v~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 78 VMKVFFIDLQMPYSVVKNEQVEIRAILHNYVNED-IYVRVELLYNP-AFCSASTK-GQRYRQQFPIKALSSRAVPFVIVP 154 (252)
T ss_dssp BCCSEEEEECCCSCEETTCCEEEEEEEEECSSSC-EEEEEEECCCT-TEEESCCS-SCCEEEEEEECTTEEEEEEEEEEE
T ss_pred EECCEEEEcCCCcEEeeCCEEEEEEEEEcccCce-EEEEEEEEcCC-ceEeecCC-CCceEEEEEECCCCeEEEEEEEEe
Confidence 3467888888888888999999999999999887 77777766421 11111000 112356799999999999999986
Q ss_pred hhhhccCCCCCcEEEEEEEEEccCCceEEEEEeEEEeCCCeE
Q psy7363 449 EEYYKRLVDQADFNIACLATVHDTNFEYFAQDDFRVRKPDIR 490 (552)
Q Consensus 449 ~eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~d~~L~~P~l~ 490 (552)
.. -+.+.+++.|........=..++.+.+...-+.
T Consensus 155 ~~-------~G~~~i~v~A~~~~~~~~D~v~k~L~V~peG~~ 189 (252)
T 3hrz_B 155 LE-------QGLHDVEIKASVQEALWSDGVRKKLKVVPEGVQ 189 (252)
T ss_dssp CS-------SEEEEEEEEEEETTSSCEEEEEEEEEEECSSEE
T ss_pred cc-------CCcEEEEEEEEecCCCcCceEEEEEEECCCCeE
Confidence 32 245566666655443323334455555443343
No 13
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=86.19 E-value=6.8 Score=34.96 Aligned_cols=103 Identities=8% Similarity=0.141 Sum_probs=69.3
Q ss_pred CceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEE--EEEEEeEcCcccccee---------eEeeEEEEcCCCE
Q psy7363 371 NDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVIL--RVDAVTYTGKVGDSVK---------KTKEDVVVKRGKS 439 (552)
Q Consensus 371 ~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l--~a~~v~YtG~~~~~~~---------~~~~~v~L~p~e~ 439 (552)
..|.+++.... .|+.+.+.++++|.++.. .++++.- .++-+.|+-. ...+| ......+|+||+.
T Consensus 5 ~~l~~~v~~~~---~g~~v~~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~-G~~VwrwS~~~~FtQa~~~~tl~pGE~ 79 (120)
T 3isy_A 5 QEVVLSIDAIQ---EPEQIKFNMSLKNQSERA-IEFQFSTGQKFELVVYDSE-HKERYRYSKEKMFTQAFQNLTLESGET 79 (120)
T ss_dssp CSEEEEEEEEE---CSSCEEEEEEEEECSSSC-EEEEESSSCCEEEEEECTT-CCEEEETTTTCCCCCCCEEEEECTTCE
T ss_pred cEEEEEEeecc---CCCeEEEEEEEEcCCCCc-EEEEeCCCCEEEEEEECCC-CCEEEEccccchhhhhhceEEECCCCE
Confidence 45677766433 789999999999999988 7777643 3455666511 13444 3457899999999
Q ss_pred EEEEEEEehhhhhccCCC-CCcEEEEEEEEEccCCceEEEEEeEEE
Q psy7363 440 EEIVLHVSYEEYYKRLVD-QADFNIACLATVHDTNFEYFAQDDFRV 484 (552)
Q Consensus 440 ~~v~l~I~y~eY~~~L~d-~~~i~v~a~a~v~et~~~~~a~~d~~L 484 (552)
......++ ..+.. .-.++..-.+++.+.+ .+-+.+.|.+
T Consensus 80 ~~f~~~w~-----~~~~pG~Ytl~a~l~~~~~~~~-~~~~~~~~~~ 119 (120)
T 3isy_A 80 YDFSDVWK-----EVPEPGTYEVKVTFKGRAENLK-QVQAVQQFEV 119 (120)
T ss_dssp EEEEEEES-----SCCCSEEEEEEEEECCEETTCC-CCEEEEEEEE
T ss_pred EEEEEEeC-----CCCCCccEEEEEEEEeeeccce-eeeeeeEEEe
Confidence 99999998 22322 2356666677887775 5555555543
No 14
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=82.65 E-value=9.5 Score=45.26 Aligned_cols=109 Identities=13% Similarity=0.089 Sum_probs=70.3
Q ss_pred CceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEE--EEeEcCccccceeeEeeEEEEcCCCEEEEEEEEeh
Q psy7363 371 NDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVD--AVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSY 448 (552)
Q Consensus 371 ~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~--~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y 448 (552)
.++-+...+...+.-|+-+.+.+.|.|.+... .++++.+.+. .....|..... .+....++|++++.+.+.+.|..
T Consensus 664 kp~~v~~~lP~~v~~Gd~~~l~~~v~N~~~~~-~~v~v~l~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~~~~v~f~i~~ 741 (1325)
T 2pn5_A 664 QPFYIVENLPYSIKRGEAVVLQFTLFNNLGAE-YIADVTLYNVANQTEFVGRPNTD-LSYTKSVSVPPKVGVPISFLIKA 741 (1325)
T ss_dssp CSEEEEEECCSEEETTCEEEEEEEEEECSSSC-EEEEEEEECGGGCEEETTSCTTC-CEEEEEEEECTTCCEEEEEEEEE
T ss_pred eeEEEEcCCCcEEEcCCEEEEEEEEEeCCCCc-EEEEEEEeecCCceEEeccCCCC-CcceEEEEECCCCeEEEEEEEEE
Confidence 46666677766778899999999999999988 7888777532 23333332221 22457899999999999999986
Q ss_pred hhhhccCCCCCcEEEEEEEEEccCCceEEEEEeEEEeCCC
Q psy7363 449 EEYYKRLVDQADFNIACLATVHDTNFEYFAQDDFRVRKPD 488 (552)
Q Consensus 449 ~eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~d~~L~~P~ 488 (552)
.. -+.+.+.+.|........-..++.+.+..+-
T Consensus 742 ~~-------~G~~~i~v~a~~~~~~~~D~v~~~l~V~p~~ 774 (1325)
T 2pn5_A 742 RK-------LGEMAVRVKASIMLGHETDALEKVIRVMPES 774 (1325)
T ss_dssp CS-------SEEEEEEEEEESSTTSSEEEEEEEEEEECSS
T ss_pred cc-------cceEEEEEEEEecCCCCCcEEEEEEEEecCc
Confidence 43 2344555555433211233445556665543
No 15
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=81.99 E-value=8.6 Score=44.05 Aligned_cols=110 Identities=13% Similarity=0.138 Sum_probs=73.6
Q ss_pred CCceEEEEEecCCCCCCCCEEEEEEEEeCCC-CCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEeh
Q psy7363 370 FNDIKFDFELRDDIVIGSPFSVVVKMNNKSR-DQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSY 448 (552)
Q Consensus 370 ~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~-~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y 448 (552)
..++.+...+...+.-|+-+.|.+.|.|.+. .. .++++.+.+..- +... ...-.+....++|++++.+.+.+.|.+
T Consensus 78 ~kp~~v~~~LP~~v~~GD~~~i~~~v~N~~~~~~-~~v~v~l~~~~~-~~~~-~~~~~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 78 MQDFFIDLRLPYSVVRNEQVEIRAVLYNYRQNQE-LKVRVELLHNPA-FCSL-ATTKRRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp CCSSEEEEECCSEEETTCCEEEEEEEEECCSSCC-EEEEEEECCCTT-EECS-CCSSSCEEEEEEECTTEEEEEEEEEEE
T ss_pred eccEEEEccCCCEEecCcEEEEEEEEEcCCCCee-EEEEEEEecCCc-eEee-cCCCCcceeEEEECCCCeEEEEEEEEE
Confidence 3678888888778889999999999999999 87 788877754310 1100 001124467999999999999999986
Q ss_pred hhhhccCCCCCcEEEEEEEEEccCCceEEEEEeEEEeCCCe
Q psy7363 449 EEYYKRLVDQADFNIACLATVHDTNFEYFAQDDFRVRKPDI 489 (552)
Q Consensus 449 ~eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~d~~L~~P~l 489 (552)
.. -+.+.+++.|...+....-..++.+.+..+-+
T Consensus 155 ~~-------~G~~~i~v~a~~~~~~~~D~v~~~l~V~p~~~ 188 (915)
T 2hr0_B 155 LK-------TGLQEVEVKAAVYHHFISDGVRKSLKVVPEGI 188 (915)
T ss_dssp CS-------CEEEEEEEEEEESSSCCEEEEEEEEEEECSCC
T ss_pred Cc-------cceEEEEEEEEecCCCCCceEEEEEEEccCCc
Confidence 43 24455555555543223445566677765543
No 16
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=79.32 E-value=22 Score=43.38 Aligned_cols=110 Identities=13% Similarity=0.145 Sum_probs=72.6
Q ss_pred CceEEEEEecCCCCCCCCEEEEEEEEeCCC-CCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehh
Q psy7363 371 NDIKFDFELRDDIVIGSPFSVVVKMNNKSR-DQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYE 449 (552)
Q Consensus 371 ~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~-~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~ 449 (552)
.++-+.+.+.-.+.-|+-|.|.++|.|.+. .. .++++.+....- +...... -.+....+.|++++.+.+++.|.+.
T Consensus 826 kpf~v~~~LP~sv~~GD~~~i~~~V~N~~~~~~-~~v~v~l~~~~~-~~~~~~~-~~~~~~~v~v~a~~~~~v~f~i~p~ 902 (1661)
T 2b39_A 826 QDFFIDLRLPYSVVRNEQVEIRAILYNYREAEN-LKVRVELLYNPA-FCSLATA-KKRHQQTITIPARSSVAVPYVIVPL 902 (1661)
T ss_dssp CSEEEEEECCSCEESSCEEEEEEEEEECCTTCC-EEEEEEECCCTT-EECSSCS-SCCCEEEEEECTTCEEEEEEEEEEC
T ss_pred eeEEEEecCCcEEEeCCEEEEEEEEEcCCCCcc-EEEEEEEcCCCC-eEeecCC-CCcceEEEEECCCCcEEEEEEEEEc
Confidence 466666777677788999999999999999 87 788777754210 1111100 0234679999999999999999864
Q ss_pred hhhccCCCCCcEEEEEEEEEccCCceEEEEEeEEEeCCCeE
Q psy7363 450 EYYKRLVDQADFNIACLATVHDTNFEYFAQDDFRVRKPDIR 490 (552)
Q Consensus 450 eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~d~~L~~P~l~ 490 (552)
. -+.+.+.+.|...+....-..++.+.+..+-+.
T Consensus 903 ~-------~G~~~i~v~a~~~~~~~~D~v~~~L~V~p~g~~ 936 (1661)
T 2b39_A 903 K-------IGLHEVEVKAAVYNHFISDGVKKTLKVVPEGVR 936 (1661)
T ss_dssp S-------CEEEEEEEEEEESSSSSCEEEEEEEEEECSSEE
T ss_pred c-------cCeEEEEEEEEecCCCCCceEEEEEEEecCCee
Confidence 3 244455555555432234455667777666543
No 17
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=79.05 E-value=5.4 Score=44.52 Aligned_cols=108 Identities=13% Similarity=0.103 Sum_probs=71.8
Q ss_pred CCceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehh
Q psy7363 370 FNDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYE 449 (552)
Q Consensus 370 ~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~ 449 (552)
..++-+.+.+.-.+.-|+-|.|.++|.|.+... .++++.+.+. .|............+.|+|++.+.+.+.|.+.
T Consensus 151 ~kpf~v~~~lP~~v~~GD~~~i~~~V~N~~~~~-~~v~v~l~~~----~~~~~~~~~~~~~~~~v~a~~~~~v~f~i~~~ 225 (767)
T 4fxk_B 151 FREFHLHLRLPMSVRRFEQLELRPVLYNYLDKN-LTVSVHVSPV----EGLCLAGGGGLAQQVLVPAGSARPVAFSVVPT 225 (767)
T ss_dssp CCSEEEECCCCSCEETTCEEEECCEEEECSSSC-EEEEEEECCC----TTEECSSSSCCCEEEEECSSCEEECCEEEEEC
T ss_pred eccEEEecCCCCeeccCCEEEEEEEEEECCCCC-EEEEEEEEec----CCeEEecCCceeEEEEEcCCCeEEEEEEEEEC
Confidence 356777877778888999999999999999888 7777776532 22222233445678999999999999999764
Q ss_pred hhhccCCCCCcEEEEEEEEEccC-CceEEEEEeEEEeCCCe
Q psy7363 450 EYYKRLVDQADFNIACLATVHDT-NFEYFAQDDFRVRKPDI 489 (552)
Q Consensus 450 eY~~~L~d~~~i~v~a~a~v~et-~~~~~a~~d~~L~~P~l 489 (552)
. -+.+.+.+.|.-... ...=..++.+.+..+.+
T Consensus 226 ~-------~G~~~i~v~A~~~~~~~~~D~v~~~l~V~~~g~ 259 (767)
T 4fxk_B 226 A-------AAAVSLKVVARGSFEFPVGDAVSKVLQIEKEGA 259 (767)
T ss_dssp S-------CSEEEEEEEEEECTTCCCEEEEEEEEEEECSSE
T ss_pred c-------cCcEEEEEEEEecCCCCccceEEEEEeecCCCe
Confidence 2 244555555543321 11223455555555544
No 18
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=77.23 E-value=14 Score=44.67 Aligned_cols=89 Identities=13% Similarity=0.180 Sum_probs=61.6
Q ss_pred CCceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehh
Q psy7363 370 FNDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYE 449 (552)
Q Consensus 370 ~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~ 449 (552)
..++.+++.+.-.+.-|+-|.|.++|.|..... .++++.+.+.. +...........++.|.+++.+.+.+.|.+.
T Consensus 766 ~kpf~v~~~LP~sv~rGE~~~l~~~V~N~~~~~-~~v~V~l~~~~----~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~ 840 (1451)
T 4acq_A 766 FQPFFVELTMPYSVIRGEAFTLKATVLNYLPKC-IRVSVQLEASP----AFLAVPVEKEQAPHCICANGRQTVSWAVTPK 840 (1451)
T ss_dssp BCSEEEEEECCSEEESSSCEEEEEEEEECSSSC-EEEEEEECCCT----TEEEEESCSCCCCEEECTTEEEEEEEEEEEC
T ss_pred ECCEEEEccCCceEecCCEEEEEEEEEeccCcc-EEEEEEEEcCC----CeEeecCCCCceEEEECCCCeEEEEEEEEEC
Confidence 356777777777788899999999999999888 78887776431 1111001122467999999999999999864
Q ss_pred hhhccCCCCCcEEEEEEEEEc
Q psy7363 450 EYYKRLVDQADFNIACLATVH 470 (552)
Q Consensus 450 eY~~~L~d~~~i~v~a~a~v~ 470 (552)
. -+.+.+++.|...
T Consensus 841 ~-------~G~~~i~v~a~~~ 854 (1451)
T 4acq_A 841 S-------LGNVNFTVSAEAL 854 (1451)
T ss_dssp S-------CEEEEEEEEEEEC
T ss_pred c-------cceEEEEEEEEEc
Confidence 2 2445555555544
No 19
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=72.68 E-value=47 Score=34.75 Aligned_cols=77 Identities=18% Similarity=0.223 Sum_probs=49.0
Q ss_pred CCceEEEEEecCCC-CCCCCEEEEEEEEeCCCCCceEEEEEEEEEE--EeEc-CccccceeeEeeEEEEcCCCEEEEEEE
Q psy7363 370 FNDIKFDFELRDDI-VIGSPFSVVVKMNNKSRDQDYTVTVILRVDA--VTYT-GKVGDSVKKTKEDVVVKRGKSEEIVLH 445 (552)
Q Consensus 370 ~~~v~~~i~~~~~~-~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~--v~Yt-G~~~~~~~~~~~~v~L~p~e~~~v~l~ 445 (552)
...|.+++.+.... .-||.+.+.+.+.|.|+..=+.+++.|.-.. ++|+ +.....+.+....-.+.|+++..-.+.
T Consensus 194 sG~l~l~~sldk~~Y~pGE~I~v~v~I~N~S~k~Vk~Ikv~L~Q~~~~~~~s~~~~k~~Va~~e~~~~V~~gs~~~~~~~ 273 (393)
T 1g4m_A 194 DKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDTVAPSSTFCKVYT 273 (393)
T ss_dssp SSCEEEEEEESCSEEETTCCEEEEEEEEECSSCCEEEEEEEEEEEEEECSSBCEEEEEEEEEEEECCCBCTTEEEEEEEE
T ss_pred CCCEEEEEEECCceEcCCCEEEEEEEEEcCCCCEEeEEEEEEEEEEEEEEecCCceEEEEEEEecCCcCCCCCEEeeEEE
Confidence 46788888876665 5699999999999999866344555555443 4453 333323333222225788877666666
Q ss_pred E
Q psy7363 446 V 446 (552)
Q Consensus 446 I 446 (552)
|
T Consensus 274 L 274 (393)
T 1g4m_A 274 L 274 (393)
T ss_dssp E
T ss_pred E
Confidence 6
No 20
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=71.40 E-value=34 Score=30.14 Aligned_cols=87 Identities=11% Similarity=0.135 Sum_probs=65.4
Q ss_pred CceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehhh
Q psy7363 371 NDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYEE 450 (552)
Q Consensus 371 ~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~e 450 (552)
.++.+++.+.-++.=|+-|.|.+++.|--++. -.|++.|.. ...|.+.. ..+.+.-|.+++.+++...|..
T Consensus 6 k~~~~~l~lPysv~rgE~~~~~~~V~nyl~~~-~~v~v~L~~-s~~~~~~~-----~~~~t~Clc~~~~~t~~W~i~~-- 76 (118)
T 3es6_B 6 KIIIKNFDIPKSVRPNDEVTAVLAVQTELKEC-MVVKTYLIS-SIPLQGAF-----NYKYTACLCDDNPKTFYWDFYT-- 76 (118)
T ss_dssp CCCEECCCCCSEECSSCCEEEEEEEEECCSSC-EEEEEEEEE-SSCCCSGG-----GCEEEEEECSSSCEEEEEEECC--
T ss_pred ceEEEEeeCCceEecCCEEEEEEEEEecccce-EEEEEEecC-CcCEEccC-----CCcccEEecCCCceEEEEEEEe--
Confidence 56778888878888899999999999999988 788887743 33444432 3346778999999999999864
Q ss_pred hhccCCCCCcEEEEEEEEEccCC
Q psy7363 451 YYKRLVDQADFNIACLATVHDTN 473 (552)
Q Consensus 451 Y~~~L~d~~~i~v~a~a~v~et~ 473 (552)
| +-++|++.|...+++
T Consensus 77 ----l---g~vniTvsAea~~~~ 92 (118)
T 3es6_B 77 ----N---RTVQIAAVVDVIREL 92 (118)
T ss_dssp ----S---SCEEEEEEEEECCCS
T ss_pred ----C---CeEEEEEEEEEecCc
Confidence 2 357788877765433
No 21
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=71.29 E-value=37 Score=41.82 Aligned_cols=109 Identities=12% Similarity=0.139 Sum_probs=69.1
Q ss_pred CceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEE-EeEcCccccceeeEeeEEEEcCCCEEEEEEEEehh
Q psy7363 371 NDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDA-VTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYE 449 (552)
Q Consensus 371 ~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~-v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~ 449 (552)
.++.+++.+.-.+.-|+-|.|.++|.|..... .+|++.+.+.. ..-.+.. -......+.|+|++.+.+.+.|.+.
T Consensus 812 kpffv~l~LPysv~rGEq~~l~v~VfNy~~~~-~~V~V~L~~s~~~~~~~~~---~~~~~q~v~v~a~~~~~v~f~i~p~ 887 (1642)
T 3prx_B 812 KVFFIDLQMPYSVVKNEQVEIRAILHNYVNED-IYVRVELLYNPAFCSASTK---GQRYRQQFPIKALSSRAVPFVIVPL 887 (1642)
T ss_dssp CSEEEECCCCSCEETTCCEEEEEEEEECSSSC-EEEEEEECCCTTEEESCCS---SSCCEEEEEECSSEEEEEEEEEEEC
T ss_pred CCEEEEccCCCEEecCCEEEEEEEEEcCCCCc-EEEEEEEEcCCCeEeeccC---CCcceeEEEECCCCeEEEEEEEEEe
Confidence 35555666666677899999999999999988 88888776531 1011111 1223578999999999999999874
Q ss_pred hhhccCCCCCcEEEEEEEEEccCCceEEEEEeEEEeCCCeE
Q psy7363 450 EYYKRLVDQADFNIACLATVHDTNFEYFAQDDFRVRKPDIR 490 (552)
Q Consensus 450 eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~d~~L~~P~l~ 490 (552)
. -+.+.|++.|........=..++.+.+..+-+.
T Consensus 888 ~-------~G~~~i~v~A~~~~~~~~D~v~k~L~V~peg~~ 921 (1642)
T 3prx_B 888 E-------QGLHDVEIKASVQEALWSDGVRKKLKVVPEGVQ 921 (1642)
T ss_dssp S-------CEEEEEEEEEEESSSSCEEEEEEEEEEECSSEE
T ss_pred e-------cccEEEEEEEEecCCCccceEEEEEEEecCCcc
Confidence 2 244555555555433222234455555544443
No 22
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=67.06 E-value=60 Score=27.78 Aligned_cols=87 Identities=9% Similarity=0.048 Sum_probs=50.7
Q ss_pred CCceEEEEEecCCCCC--CCC--E--EEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEE
Q psy7363 370 FNDIKFDFELRDDIVI--GSP--F--SVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIV 443 (552)
Q Consensus 370 ~~~v~~~i~~~~~~~i--G~D--f--~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~ 443 (552)
.+++.+++-....+.+ -+| + .-++++.|++.+. ++..+.+.. ...-++.. ...++|+|++..+++
T Consensus 8 R~~~~l~V~rdR~~Ly~~~~dG~I~N~Ytlki~Nkt~~~-~~~~l~v~g-------~~~l~~~g-~~~i~v~~g~~~~~~ 78 (118)
T 2r39_A 8 VDPAGMSVIRDRNQLFRVNSAGEVENTYTLKVINKTQQV-QEYNLDVKG-------LNDVSWYG-KQTIQVEPGEVLNLP 78 (118)
T ss_dssp CCSEEEEEEECSSCCCCC--CCSEEEEEEEEEEECSSSC-EEEEEEEES-------CSSCEEES-CCEEEECTTCEEEEE
T ss_pred cCccEEEEEecCCceEEEcCCCeEEEEEEEEEEECCCCC-EEEEEEEeC-------CcccEEeC-CCcEEECCCCEEEEE
Confidence 3567777654332221 111 2 3578899999999 888888753 21111111 125999999999999
Q ss_pred EEEehhhhhccCCCCCcEEEEEE
Q psy7363 444 LHVSYEEYYKRLVDQADFNIACL 466 (552)
Q Consensus 444 l~I~y~eY~~~L~d~~~i~v~a~ 466 (552)
+.|........- ...-|+|.+.
T Consensus 79 v~v~~~~~~~~~-~~~~i~f~v~ 100 (118)
T 2r39_A 79 MSLGADPDKLNS-AITTIQFILT 100 (118)
T ss_dssp EEEEECGGGCSS-SEEEEEEEEE
T ss_pred EEEEEChHHccC-CceeEEEEEE
Confidence 888665433211 2334555544
No 23
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=65.36 E-value=13 Score=38.34 Aligned_cols=118 Identities=16% Similarity=0.135 Sum_probs=67.9
Q ss_pred ceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEE--------------EEEEEEEEEeEcCccccce-eeEeeEEEEcC
Q psy7363 372 DIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTV--------------TVILRVDAVTYTGKVGDSV-KKTKEDVVVKR 436 (552)
Q Consensus 372 ~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v--------------~~~l~a~~v~YtG~~~~~~-~~~~~~v~L~p 436 (552)
+|+++++..... .++..|+++|+|.+++. -++ .+.-..+.+.|+|....-- -.....++|+|
T Consensus 23 ~l~v~Ls~~~~~--~~~~~vk~tvtN~g~~~-~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~p 99 (343)
T 2x3c_A 23 GLDAQLTLVDGS--TDDVRVNLTLTNTGDKP-IRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKA 99 (343)
T ss_dssp CEEEEEEECCCS--SSCCEEEEEEEECSSSC-EEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECT
T ss_pred ceEEEEEecccC--CCCeEEEEEEEeCCCCc-eEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCC
Confidence 566666653322 78899999999998876 443 4444456788999775532 22346899999
Q ss_pred CCEEEEEEEEehhhhhccCCCCCcEEEEEEEEEccCCceEEEEEeEEEeCCCeEEEeCCcc
Q psy7363 437 GKSEEIVLHVSYEEYYKRLVDQADFNIACLATVHDTNFEYFAQDDFRVRKPDIRLKQLMKR 497 (552)
Q Consensus 437 ~e~~~v~l~I~y~eY~~~L~d~~~i~v~a~a~v~et~~~~~a~~d~~L~~P~l~I~v~g~~ 497 (552)
|++.+..+.|. +-| .|...+-..|.+-+.....+..+.. .+.+.+=.|+|.|.|..
T Consensus 100 G~Sve~~~dla-~~y--dLs~gG~y~v~~~g~~~a~~~~i~~--~~~~~Sn~~~~~vdg~~ 155 (343)
T 2x3c_A 100 GQSLTVQAEVS-GLY--DMSAQGQYSIRYQLPARRKRPRAKQ--AQASESNAITLWVEGVN 155 (343)
T ss_dssp TCEEEEEEECT-TTB--TCCSCEEEEEEEC------------------CCCCEEEEECCCC
T ss_pred CCeEEEEEehh-hcc--ccCCCceEEEEEeeeccCCCCcccc--ccccccccEEEeecchh
Confidence 99999888885 112 2333333444443222211101111 33466777999999865
No 24
>2hly_A AGR_C_4178P, hypothetical protein ATU2299; ATC2257, MCSG, structural genomics, PSI-2, protein structure initiative; 1.60A {Agrobacterium tumefaciens str} SCOP: d.3.1.19
Probab=62.85 E-value=3.4 Score=40.09 Aligned_cols=17 Identities=41% Similarity=0.356 Sum_probs=12.6
Q ss_pred cccHHHHHHHHhCC-CCc
Q psy7363 128 VGSMKILQQFYTKK-KPV 144 (552)
Q Consensus 128 ~GSv~IL~q~~~t~-~PV 144 (552)
+..+-||++.|+-. +|+
T Consensus 40 ~~Ga~IL~~hY~i~A~~~ 57 (207)
T 2hly_A 40 TFGAFILQQHYKVKAVPK 57 (207)
T ss_dssp HHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHhcccceec
Confidence 35678999999888 554
No 25
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=59.50 E-value=50 Score=28.25 Aligned_cols=67 Identities=13% Similarity=0.031 Sum_probs=45.9
Q ss_pred EEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehh
Q psy7363 375 FDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYE 449 (552)
Q Consensus 375 ~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~ 449 (552)
++|+..+.+.+|+++.+.++++|.=+..=+.+.+++.+. |.... ++.. .-.++|++.-++.+.+.+.
T Consensus 8 i~I~v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~-----GL~~~--~~~~-~~~v~pg~~~~~~~~~~P~ 74 (102)
T 2xzz_A 8 LSLTLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGS-----GLQRP--KILN-VGDIGGNETVTLRQSFVPV 74 (102)
T ss_dssp EEEEESSCCCSSSCEEEEEEEECCSSSCBCSEEEEEEET-----TTEEE--EEEE-ECCBCTTCEEEEEEEECCC
T ss_pred EEEEECCCcccCCeEEEEEEEECCCCCcccCEEEEEECC-----CCCcc--eEEE-cCcCCCCCEEEEEEEEecC
Confidence 455567889999999999999999888756777776653 33333 1111 2347788887777776543
No 26
>2icn_B Prolactin-inducible protein; beta-pleated sheet, complex, seminal fluid; HET: NAG BMA MAN P6G; 3.23A {Homo sapiens} PDB: 3es6_B*
Probab=56.93 E-value=52 Score=29.16 Aligned_cols=87 Identities=11% Similarity=0.152 Sum_probs=65.8
Q ss_pred CceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehhh
Q psy7363 371 NDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYEE 450 (552)
Q Consensus 371 ~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~e 450 (552)
.++.+++.+.-++.=|+.|.|++++.|-=++- -.|++.|..+ ..|.+.. ..+.+--|-+++.++....|....
T Consensus 6 qPffveltlPySv~rgE~f~lkatVfNyL~~C-i~V~v~L~~S-~~~~~~~-----~~~~s~ClC~~~~ktf~W~v~~~~ 78 (118)
T 2icn_B 6 KIIIKNFDIPKSVRPNDEVTAVLAVQTELKEC-MVVKTYLISS-IPLQGAF-----NYKYTACLCDDNPKTFYWDFYTNR 78 (118)
T ss_dssp CCSEECCCCCSEECSSCCEEEEEEEEECCSSC-EEEEEEEEES-SCCCGGG-----GCEEEEEECSSSCEEEEEEECCSS
T ss_pred CCEEEEEeCCCcccCCCEEEEEEEEEeccCcC-EEEEEEEcCC-CCeEeec-----CCcCCEEECCCCCEEEEEEEEECc
Confidence 55667777767778899999999999998877 6777777644 3677643 334677788888999999998762
Q ss_pred hhccCCCCCcEEEEEEEEEccCC
Q psy7363 451 YYKRLVDQADFNIACLATVHDTN 473 (552)
Q Consensus 451 Y~~~L~d~~~i~v~a~a~v~et~ 473 (552)
-++|++.|....++
T Consensus 79 ---------~Vnitv~ae~~~~~ 92 (118)
T 2icn_B 79 ---------TVQIAAVVDVIREL 92 (118)
T ss_dssp ---------CEEEEEEEEECCCS
T ss_pred ---------EEEEEEEEEEEcCC
Confidence 68888888876544
No 27
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=55.61 E-value=8.2 Score=34.61 Aligned_cols=89 Identities=7% Similarity=0.039 Sum_probs=56.8
Q ss_pred CCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehhhh-hccCC-CCC
Q psy7363 382 DIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYEEY-YKRLV-DQA 459 (552)
Q Consensus 382 ~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~eY-~~~L~-d~~ 459 (552)
.+.+|+..+-.++|+|.+.-+ -+.++...... ......-+.-....-+|.|+++..+.+.+.-++- ...|- ...
T Consensus 38 ~v~~~~~~~~~l~I~Ntg~vp-a~F~f~~~~~~---~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v~~~~~~~ln~g~~ 113 (140)
T 3qbt_B 38 NVKFRQLQKEKFQISNNGQVP-CHFSFIPKLND---SQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGED 113 (140)
T ss_dssp EECBTCCEEEEEEEEECSSSC-EEEEEECCTTC---SSSSCTTEEEESCEEEECTTCEEEEEEEECBCHHHHHHHHHSSS
T ss_pred eceeeeeeeeEEEEEcCCccc-eEEEEecCCCc---hhhhhHhhhcCCcccccCCCCeeEEEEEEEEccCcccccccchh
Confidence 467999999999999999887 55444321100 0122234555678899999999999999886552 11111 112
Q ss_pred cEEEEEEEEEccCCc
Q psy7363 460 DFNIACLATVHDTNF 474 (552)
Q Consensus 460 ~i~v~a~a~v~et~~ 474 (552)
.+.=..+++|...+.
T Consensus 114 ~l~diLvL~Ve~G~d 128 (140)
T 3qbt_B 114 KIEDILVLHLDRGKD 128 (140)
T ss_dssp CSCEEEEEEETTSCE
T ss_pred hhheeEEEEeecCCc
Confidence 344466778887653
No 28
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=55.09 E-value=18 Score=40.47 Aligned_cols=67 Identities=10% Similarity=0.038 Sum_probs=51.2
Q ss_pred CCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEE---EEEEehhhh---hccCCC
Q psy7363 384 VIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEI---VLHVSYEEY---YKRLVD 457 (552)
Q Consensus 384 ~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v---~l~I~y~eY---~~~L~d 457 (552)
.-|+++.|.+.++|.+.+. ...++.+.. +|-+..+.+ .+.++.|.+|+..++ .+.++.++| ..+|++
T Consensus 19 ~PGe~V~l~~~l~n~t~~~-~~gtv~~~v---~hl~~~V~~---~~~~~~l~~G~s~~~~~~~~~~P~~df~n~~GYlve 91 (643)
T 3vmn_A 19 QAGEAVHLNLTLNNTTSLA-QNITATAEV---YSLENKLKT---LQYTKYLLPNESYTTQKGEFVIPANSLANNRGYLLK 91 (643)
T ss_dssp CTTSCEEEECEEECCSSSC-EEEEEEEEE---EETTEEEEE---EEEEEEECTTCEEECCTTSEEECTTSSCSSEEEEEE
T ss_pred CCCCeEEEEEEEecccCcc-ceeEEEEEE---Eeccccccc---ceEEEEecCCCcceeeeeeeecCccccccCceEEEE
Confidence 4599999999999999988 777766653 455555444 467789999998666 788999887 777663
No 29
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.69 E-value=43 Score=28.61 Aligned_cols=61 Identities=5% Similarity=-0.018 Sum_probs=48.4
Q ss_pred CCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehhhhhc
Q psy7363 381 DDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYEEYYK 453 (552)
Q Consensus 381 ~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~eY~~ 453 (552)
....+|+--+..+.|+|.+... -..++.. ...|.-......|.|+++..+.+...+.+...
T Consensus 35 g~~~v~~~~~~~~~l~N~g~~~-~~f~~~~-----------~~~F~i~P~~g~L~pg~~~~i~V~F~P~~~g~ 95 (122)
T 2ys4_A 35 STCPVKYSTQKILLVRNIGNKN-AVFHIKT-----------CRPFSIEPAIGTLNVGESMQLEVEFEPQSVGD 95 (122)
T ss_dssp CSEESSSCEEEEEEEECCSSSC-EEEEEEC-----------CTTEEEESSEEEECTTCEEEEEEEECCSSSBC
T ss_pred CCeecCCeEEEEEEEEECCCCC-EEEEEec-----------CCCeEEECCcCEECCCCEEEEEEEEEcCCCcc
Confidence 5567999999999999998866 4443332 35787788889999999999999998886544
No 30
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=50.06 E-value=59 Score=28.47 Aligned_cols=68 Identities=16% Similarity=0.165 Sum_probs=42.2
Q ss_pred CceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEE-EEcCCCEEEEEEEEeh
Q psy7363 371 NDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDV-VVKRGKSEEIVLHVSY 448 (552)
Q Consensus 371 ~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v-~L~p~e~~~v~l~I~y 448 (552)
+||.+.......+.-|+.+.+.++++|.........++.+.+ .|.. -....+ .|.+|+...+.+....
T Consensus 3 PDL~vt~itP~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~-----~g~~-----v~t~~v~~LaaG~s~tv~~~w~~ 71 (114)
T 2l0d_A 3 PDLVPVSLTPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLV-----DGIV-----VDTQTVTSLESENSTNVDFHWTL 71 (114)
T ss_dssp CCEEEEEEECSEECTTSEEEEEEEEEECSSSCBCCEEEEEEE-----TTEE-----EEEEEESCBCBTCEEEEEEEEEC
T ss_pred CCcEEEeccCCCcCCCCeEEEEEEEEECCCCCCCCEEEEEEE-----CCEE-----EcceecccccCCCEEEEEEEEee
Confidence 456555443455678999999999999987653455555443 2321 122234 4777777777766543
No 31
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=49.10 E-value=41 Score=37.86 Aligned_cols=65 Identities=8% Similarity=0.114 Sum_probs=42.7
Q ss_pred CCCEEEEEEEEeCCCCCce-EEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEehhhhh
Q psy7363 386 GSPFSVVVKMNNKSRDQDY-TVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVSYEEYY 452 (552)
Q Consensus 386 G~Df~l~v~l~N~s~~~~r-~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~y~eY~ 452 (552)
++.++|+++|+|..+...+ .|++.++... .=.+.+..+++- -..+.|+|+|+++|.+.|+.++..
T Consensus 612 ~~~~~vsv~VtNtG~~~G~EVvQlYv~~~~-~~~~~P~k~L~g-F~kv~L~pGes~~V~~~l~~~~ls 677 (713)
T 3zyz_A 612 QNVATVTVDIANSGQVTGAEVAQLYITYPS-SAPRTPPKQLRG-FAKLNLTPGQSGTATFNIRRRDLS 677 (713)
T ss_dssp SEEEEEEEEEEECSSSCEEEEEEEEEECCT-TSSSCCSCEEEE-EEEEEECTTCEEEEEEEEEGGGGC
T ss_pred CCeEEEEEEEEeCCCCccceeeeeeeecCC-CCCCchhHHhhh-cccceeCCCCeEEEEEEEcHHHee
Confidence 5569999999999987633 2344443211 001344455533 355779999999999999987654
No 32
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=47.30 E-value=33 Score=39.57 Aligned_cols=65 Identities=15% Similarity=0.236 Sum_probs=43.6
Q ss_pred CCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCc-----cccceeeEeeEEEEcCCCEEEEEEEEehhhh
Q psy7363 386 GSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGK-----VGDSVKKTKEDVVVKRGKSEEIVLHVSYEEY 451 (552)
Q Consensus 386 G~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~-----~~~~~~~~~~~v~L~p~e~~~v~l~I~y~eY 451 (552)
.+.+.++++++|.+... ++.+....+.+-.-.|. +.........+|+|+|++++++.+++....+
T Consensus 498 ~~~~~~~~tv~N~g~~~-~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~ 567 (926)
T 1xf1_A 498 SDKFEVTVNVHNKSDKP-QELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRF 567 (926)
T ss_dssp CSEEEEEEEEEECSSSC-EEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHH
T ss_pred CccEEEEEEEEEeCCCc-eeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcCcc
Confidence 45789999999999876 66665554433111121 1111233456899999999999999987654
No 33
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=47.30 E-value=26 Score=42.81 Aligned_cols=90 Identities=11% Similarity=0.093 Sum_probs=58.8
Q ss_pred CceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEE-EeEcCccc--c--ceeeEeeEEEEcCCCEEEEEEE
Q psy7363 371 NDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDA-VTYTGKVG--D--SVKKTKEDVVVKRGKSEEIVLH 445 (552)
Q Consensus 371 ~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~-v~YtG~~~--~--~~~~~~~~v~L~p~e~~~v~l~ 445 (552)
.++-+...+.-.+.-|+-+.|.++|.|.+... .++++.+.+.. +.-.+... . .-.+....++|++++.+.+.+.
T Consensus 821 kpf~v~~~LP~~v~~GD~~~i~~~V~N~~~~~-~~v~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~ 899 (1676)
T 3cu7_A 821 KDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSG-MQFCVKMSAVEGICTSESPVIDHQGTKSSKCVRQKVEGSSSHLVTFT 899 (1676)
T ss_dssp CSEEEEEECCSCEETTCCEEEEEEEEECSSSC-BCCCCEECCCTTEECSSCC----------CCCCCCBCTTEEEECCEE
T ss_pred eeEEEEccCCcEEEECcEEEEEEEEEcCCCCc-EEEEEEEecCCCeEEeccccccccccccceeEEEEECCCCeEEEEEE
Confidence 45566666666778899999999999999988 78887776421 11111100 0 0022246789999999999999
Q ss_pred EehhhhhccCCCCCcEEEEEE
Q psy7363 446 VSYEEYYKRLVDQADFNIACL 466 (552)
Q Consensus 446 I~y~eY~~~L~d~~~i~v~a~ 466 (552)
|.+.. .....|+|+|.
T Consensus 900 i~p~~-----~G~~~i~v~A~ 915 (1676)
T 3cu7_A 900 VLPLE-----IGLHNINFSLE 915 (1676)
T ss_dssp EEECS-----SSCCCEEEEEE
T ss_pred EEEcc-----cCcEEEEEEEE
Confidence 98643 23345666664
No 34
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=46.21 E-value=64 Score=34.00 Aligned_cols=78 Identities=18% Similarity=0.253 Sum_probs=48.3
Q ss_pred CCceEEEEEecCCC-CCCCCEEEEEEEEeCCCCCceEEEEEE--EEEEEeE-cCccccceeeEeeEEEEcCCCEEEEEEE
Q psy7363 370 FNDIKFDFELRDDI-VIGSPFSVVVKMNNKSRDQDYTVTVIL--RVDAVTY-TGKVGDSVKKTKEDVVVKRGKSEEIVLH 445 (552)
Q Consensus 370 ~~~v~~~i~~~~~~-~iG~Df~l~v~l~N~s~~~~r~v~~~l--~a~~v~Y-tG~~~~~~~~~~~~v~L~p~e~~~v~l~ 445 (552)
..+|++++.+.... .-||.|.|.+.+.|+|+..=+.+++.+ .+..+.| +|.....+......-.+.|+++-.=.+.
T Consensus 210 sGpl~L~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~y~~~Va~~E~~epV~pgst~~k~~~ 289 (380)
T 3ugu_A 210 DKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLT 289 (380)
T ss_dssp CCEEEEEEEESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCEEEEEEEEEECSCCBCTTEEEEEEEE
T ss_pred CCCEEEEEEeCCccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCeEEEEEEEeccCCcCCCCCeEEeeEE
Confidence 46788888876555 459999999999999987634444433 3444444 3444444332222226788877554554
Q ss_pred Ee
Q psy7363 446 VS 447 (552)
Q Consensus 446 I~ 447 (552)
|.
T Consensus 290 l~ 291 (380)
T 3ugu_A 290 LV 291 (380)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 35
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=42.31 E-value=7 Score=32.25 Aligned_cols=9 Identities=44% Similarity=0.589 Sum_probs=8.7
Q ss_pred ccCCCccee
Q psy7363 164 TLEAPNKDI 172 (552)
Q Consensus 164 ~LGIP~R~V 172 (552)
|||||.|++
T Consensus 2 CLaIP~kVv 10 (75)
T 2z1c_A 2 CLAVPGKVI 10 (75)
T ss_dssp CCSCCEEEE
T ss_pred cccccEEEE
Confidence 999999999
No 36
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=41.40 E-value=67 Score=30.11 Aligned_cols=118 Identities=12% Similarity=0.038 Sum_probs=64.8
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhh---ccccc--ccccc-cCCCceEEE-EEecCCCCCCCCEEEEEEEEeCCCCCceEEE
Q psy7363 335 DNYKYEEKSEEERSSMLKALKQS---ASIFS--RYYLN-EEFNDIKFD-FELRDDIVIGSPFSVVVKMNNKSRDQDYTVT 407 (552)
Q Consensus 335 ~~YKypEGS~eER~~~~kA~~~~---~~~~~--~~~~~-~~~~~v~~~-i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~ 407 (552)
|+-.+-|-|+.|+.+-+++--.+ .++.. ..... -+.+.+++. ++..+-...|.+|.+.+.|+|..+.+ +.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~f~~~ki~~~~~PeV~v~~v~~~~~~l~~~~~~l~LrV~NPN~~p---Lp 79 (174)
T 1yyc_A 3 HHHHHLEASADEKVVEEKASVISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQS---IP 79 (174)
T ss_dssp CCSCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCCCEEEEEEEEEEEECSSSEEEEEEEEEEECSSSC---CB
T ss_pred ccccccccccchhHHHHhhhhhhHHHHHhhhhHHHhhcCCCCCEEEEEEeEEeccccceEEEEEEEEEECCCCCC---cc
Confidence 44556788988887777662211 11111 00000 122333322 22222334589999999999997766 33
Q ss_pred EEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEE--EEEEehhhhhccCC
Q psy7363 408 VILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEI--VLHVSYEEYYKRLV 456 (552)
Q Consensus 408 ~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v--~l~I~y~eY~~~L~ 456 (552)
+.=-.-.+.=+|....+ .......+|+++.+..+ +++++|..-.+.+.
T Consensus 80 i~gi~Y~L~vnG~~las-G~s~~~~tIpa~g~~~v~Vpv~v~~~~l~~~~~ 129 (174)
T 1yyc_A 80 ICQISYILKSATRTIAS-GTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMK 129 (174)
T ss_dssp CCSEEEEEEESSSCEEE-EEESCCCBCCSSEEEEEEEEEEESHHHHHHTCC
T ss_pred ccceEEEEEECCEEEEE-EecCCCceECCCCcEEEEEEEEEEHHHHHHHHH
Confidence 33333344557776665 34445678888877655 55556655444443
No 37
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=41.32 E-value=38 Score=38.02 Aligned_cols=64 Identities=19% Similarity=0.284 Sum_probs=44.3
Q ss_pred CCCEEEEEEEEeCCCCCce-EEEEEEEEEEEeEcC--ccccceeeEeeEE-EEcCCCEEEEEEEEehhhhhc
Q psy7363 386 GSPFSVVVKMNNKSRDQDY-TVTVILRVDAVTYTG--KVGDSVKKTKEDV-VVKRGKSEEIVLHVSYEEYYK 453 (552)
Q Consensus 386 G~Df~l~v~l~N~s~~~~r-~v~~~l~a~~v~YtG--~~~~~~~~~~~~v-~L~p~e~~~v~l~I~y~eY~~ 453 (552)
|+.++|+++|+|..+...+ .|.+.++.. +.+ .+..+++ .-..+ .|+|||++++.+.|+.++..-
T Consensus 614 ~~~~~v~v~VtNtG~~~G~eVvQlYv~~~---~~~~~~P~k~L~-gF~kv~~L~pGes~~V~~~l~~~~l~~ 681 (721)
T 2x41_A 614 GETLRVQYRIENTGGRAGKEVSQVYIKAP---KGKIDKPFQELK-AFHKTRLLNPGESEEVVLEIPVRDLAS 681 (721)
T ss_dssp SSEEEEEEEEEECSSSCBCCEEEEEEECC---CSSSCCCSCEEE-EEEECCCBCTTCEEEEEEEEEGGGGCE
T ss_pred CCeEEEEEEEEECCCCCCcEEeeEEEccC---CCCCCCchHHhh-cccccccCCCCCeEEEEEEECHHHhcE
Confidence 6779999999999887633 355555532 222 3444443 33456 789999999999999876543
No 38
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=39.72 E-value=96 Score=35.64 Aligned_cols=63 Identities=13% Similarity=0.193 Sum_probs=42.9
Q ss_pred CCCEEEEEEEEeCC-CCCce-EEEEEEEEEEEeEc--CccccceeeEeeEEEEcCCCEEEEEEEEe-hhhhh
Q psy7363 386 GSPFSVVVKMNNKS-RDQDY-TVTVILRVDAVTYT--GKVGDSVKKTKEDVVVKRGKSEEIVLHVS-YEEYY 452 (552)
Q Consensus 386 G~Df~l~v~l~N~s-~~~~r-~v~~~l~a~~v~Yt--G~~~~~~~~~~~~v~L~p~e~~~v~l~I~-y~eY~ 452 (552)
++.++|+++|+|.. +...+ .|.+.++.. +. ..+..+++.- ..+.|+|+|++++.+.|+ .++..
T Consensus 734 ~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~---~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~~~l~ 801 (845)
T 3abz_A 734 DDKIAISVDVKNTGDKFAGSEVVQVYFSAL---NSKVSRPVKELKGF-EKVHLEPGEKKTVNIDLELKDAIS 801 (845)
T ss_dssp SSEEEEEEEEEECCSSCCEEEEEEEEEEES---SCSSCCCSCEEEEE-EEEEECTTCEEEEEEEEEHHHHHC
T ss_pred CCeEEEEEEEEECCcCCCcceeeeeeEeCC---CCCcchhhheeccc-eeEEECCCCEEEEEEEeCChHHee
Confidence 67799999999998 65522 345555432 22 2455555433 456899999999999999 65543
No 39
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=38.38 E-value=2.6e+02 Score=28.71 Aligned_cols=102 Identities=12% Similarity=0.055 Sum_probs=66.2
Q ss_pred CCCCEEEEEEEEeC---CCCCceEEEEEEEEEEE-eEcCccccceeeEeeEE----EEcCCCEEEEEEEEehhhhhccCC
Q psy7363 385 IGSPFSVVVKMNNK---SRDQDYTVTVILRVDAV-TYTGKVGDSVKKTKEDV----VVKRGKSEEIVLHVSYEEYYKRLV 456 (552)
Q Consensus 385 iG~Df~l~v~l~N~---s~~~~r~v~~~l~a~~v-~YtG~~~~~~~~~~~~v----~L~p~e~~~v~l~I~y~eY~~~L~ 456 (552)
-|+.+.=.|.|+.. ..-.-+.|++.+..++. +|+.....++.+...++ +|.++..-...+.++-..|..+-.
T Consensus 46 ~GE~VsG~V~I~~~~~~k~l~h~GIki~~~G~~e~~~~~~~~~~f~~~~~eL~~pG~L~~G~~fpF~F~lp~~l~eSy~G 125 (340)
T 2r51_A 46 DGETVSGKVSLSLKNPNKRLEHQGIKIEFIGQIELYYDRGNHHEFVSLVKDLARPGEITQSQAFDFEFTHVEKPYESYTG 125 (340)
T ss_dssp TBCCEEEEEEEEESSTTSCEEESCEEEEEEEEEEEGGGTTCCEEEEEEEEEEECSEEECSCEEEEEEECSBCCCSCCEEC
T ss_pred CCCEEEEEEEEEECCCCCeeEEEEEEEEEEEEEEEEecCCCcEEEEEEEEEecCCCccCCCcEEeeEeCCCCCCCcCeEe
Confidence 38999888888877 32222568888887765 45655555554444444 466665533344445556666666
Q ss_pred CCCcEEEEEEEEEccCCceEEEEEeEEEeC
Q psy7363 457 DQADFNIACLATVHDTNFEYFAQDDFRVRK 486 (552)
Q Consensus 457 d~~~i~v~a~a~v~et~~~~~a~~d~~L~~ 486 (552)
...-||=.+-|.+...-..+..+++|.+..
T Consensus 126 ~~g~IrY~vkv~i~Rp~~di~~~~eF~V~~ 155 (340)
T 2r51_A 126 QNVKLRYFLRATISRRLNDVVKEMDIVVHT 155 (340)
T ss_dssp SSEEEEEEEEEEECCSSCCEEEEEEEEEEC
T ss_pred eeEEEEEEEEEEEEecCCCceEEEEEEEEe
Confidence 777888888888876554677788886653
No 40
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=37.66 E-value=2e+02 Score=30.31 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=71.4
Q ss_pred CCCceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEc--------Ccccccee----eEeeEEEEcC
Q psy7363 369 EFNDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYT--------GKVGDSVK----KTKEDVVVKR 436 (552)
Q Consensus 369 ~~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~Yt--------G~~~~~~~----~~~~~v~L~p 436 (552)
+...|+.+++...=-+-|....++++++|+++++ -.+.-..+|..-+-+ +-+..-+- +-+-.--+.|
T Consensus 246 ~~~~V~~~v~~A~Y~vpgR~l~~~~~VtN~g~~p-vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~P 324 (382)
T 1yew_A 246 PAPTVSVKVEDATYRVPGRAMRMKLTITNHGNSP-IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAP 324 (382)
T ss_dssp CCCSEEEEEEEEEEESSCSEEEEEEEEEECSSSC-EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCT
T ss_pred CCCceEEEeeccEEecCCcEEEEEEEEEcCCCCc-eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCC
Confidence 3567888887666567799999999999999988 555545455443322 12211121 2222334889
Q ss_pred CCEEEEEEEEehhhhh-c---cCCCCCcEEEEEEEEEccC-CceEEEE
Q psy7363 437 GKSEEIVLHVSYEEYY-K---RLVDQADFNIACLATVHDT-NFEYFAQ 479 (552)
Q Consensus 437 ~e~~~v~l~I~y~eY~-~---~L~d~~~i~v~a~a~v~et-~~~~~a~ 479 (552)
||++++.+.+.-.... + .|.-+.-.|+..+.--.+. +..++.+
T Consensus 325 GETr~~~v~a~da~WeveRL~~l~~D~dSrfgGLLfF~d~~G~r~~~~ 372 (382)
T 1yew_A 325 GETRTVDVTASDAAWEVYRLSDIIYDPDSRFAGLLFFFDATGNRQVVQ 372 (382)
T ss_dssp TCEEEEEEEEECHHHHHTCGGGGGGSSCCEEEEEEEEEETTSCEEEEE
T ss_pred CceeEEEEEeehHHHHHHHhhhhhcCcccceeEEEEEEcCCCCEEEEe
Confidence 9999999999877643 2 3446677788888777655 4444443
No 41
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=35.83 E-value=1.5e+02 Score=31.64 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=72.6
Q ss_pred CCceEEEEEecCCCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCcc--------cc-----ceeeEeeEEEEcC
Q psy7363 370 FNDIKFDFELRDDIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKV--------GD-----SVKKTKEDVVVKR 436 (552)
Q Consensus 370 ~~~v~~~i~~~~~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~--------~~-----~~~~~~~~v~L~p 436 (552)
...|+.+++...=-+-|....++++++|+++++ -.+.-..+|..-+-|... .. .+. +-. .+.|
T Consensus 281 ~~~V~~~v~~A~Y~vpgR~l~~~~~VtN~g~~p-vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~--s~~-pI~P 356 (419)
T 3rfr_A 281 KEQVTTELNGGVYKVPGRELTINVKVKNGTSQP-VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS--NDD-VIAP 356 (419)
T ss_dssp SCCCEEEEEEEEEESSSSEEEEEEEEECCSSSC-BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC--CCC-CBCT
T ss_pred CCceEEEEeceEEecCCcEEEEEEEEecCCCCc-eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC--CCC-CcCC
Confidence 456788877655556799999999999999998 666555555555444322 11 133 445 8999
Q ss_pred CCEEEEEEEEehhhhh----ccCCCCCcEEEEEEEEEccC-CceEEEE
Q psy7363 437 GKSEEIVLHVSYEEYY----KRLVDQADFNIACLATVHDT-NFEYFAQ 479 (552)
Q Consensus 437 ~e~~~v~l~I~y~eY~----~~L~d~~~i~v~a~a~v~et-~~~~~a~ 479 (552)
||++++.+.+.-.... ..|.-+.-.|+..+.--.+. ++.++.+
T Consensus 357 GETrt~~V~a~da~WeveRL~~l~~D~dSrfgGLLfF~d~~G~r~i~~ 404 (419)
T 3rfr_A 357 GESKEIVVKIQDARWDIERLSDLAYDTDSQVGGLLFFFTPDGKRFAAE 404 (419)
T ss_dssp TCEEEEEEEEECHHHHHTTGGGGGGSSSCEEEEEEEEECSSSCEEEEE
T ss_pred CcceEEEEEeehHHHHHHHHhhhhcCchhheeEEEEEEcCCCCEEEEe
Confidence 9999999999877643 23446677788888877655 4444443
No 42
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=35.25 E-value=9.9 Score=33.26 Aligned_cols=12 Identities=17% Similarity=0.263 Sum_probs=10.6
Q ss_pred eeeccCCCccee
Q psy7363 161 TCRTLEAPNKDI 172 (552)
Q Consensus 161 vlR~LGIP~R~V 172 (552)
+.=|||||.|+|
T Consensus 20 ~~MCLaIP~kVv 31 (103)
T 3d3r_A 20 QGMCLSIPSQVV 31 (103)
T ss_dssp ETTEECCCEEEE
T ss_pred ccEEEecCEEEE
Confidence 556999999999
No 43
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=35.07 E-value=4.2e+02 Score=27.81 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=49.5
Q ss_pred CCceEEEEEecCCC-CCCCCEEEEEEEEeCCCCCceEEEEEEEEEEE--eE-cCccccceeeEeeEEEEcCCCEEEEEEE
Q psy7363 370 FNDIKFDFELRDDI-VIGSPFSVVVKMNNKSRDQDYTVTVILRVDAV--TY-TGKVGDSVKKTKEDVVVKRGKSEEIVLH 445 (552)
Q Consensus 370 ~~~v~~~i~~~~~~-~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v--~Y-tG~~~~~~~~~~~~v~L~p~e~~~v~l~ 445 (552)
..+|.+++.+.... .-||.+.|.+.+.|.|+..=+.+++.+.=.+. .| ++.....+......-.+.|++...-.+.
T Consensus 191 sGpl~l~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~~k~~Va~~e~~e~V~pgst~~k~~~ 270 (392)
T 1suj_A 191 DRPLHLEASLDKEIYYHGEPINVNVKINNTTGKIVKKIKIIVEQVTDVVLFSLDKYVKTVCAEETNDTVAANSTLSKTFS 270 (392)
T ss_dssp TEEEEEEEEESCSEEETTCCEEEEEEEEECSSSEEEEEEEEEEEEEEECSSSCCEEEEEEEEEECCCCBCTTEEEEEEEE
T ss_pred CCCEEEEEEeCCccccCCCEEEEEEEEECCCCCcEeEEEEEEEEEEEEEEecCCcEEEEEEEEecCCCcCCCCEEEEEEE
Confidence 46788888886666 55999999999999998764445554443222 23 4444333333221226789888666666
Q ss_pred Ee
Q psy7363 446 VS 447 (552)
Q Consensus 446 I~ 447 (552)
|.
T Consensus 271 L~ 272 (392)
T 1suj_A 271 VT 272 (392)
T ss_dssp EC
T ss_pred Ee
Confidence 65
No 44
>2ot2_A Hydrogenase isoenzymes formation protein HYPC; beta barrel, chaperone; NMR {Escherichia coli K12} SCOP: b.40.14.1
Probab=30.31 E-value=8.6 Score=32.79 Aligned_cols=9 Identities=11% Similarity=0.183 Sum_probs=8.5
Q ss_pred ccCCCccee
Q psy7363 164 TLEAPNKDI 172 (552)
Q Consensus 164 ~LGIP~R~V 172 (552)
|||||.|+|
T Consensus 2 CLaIP~kVv 10 (90)
T 2ot2_A 2 CIGVPGQIR 10 (90)
T ss_dssp CCEEEEEEE
T ss_pred ccccceEEE
Confidence 899999999
No 45
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}
Probab=29.12 E-value=1.9e+02 Score=25.88 Aligned_cols=58 Identities=12% Similarity=0.089 Sum_probs=40.5
Q ss_pred CCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCccccceeeEeeEEEEcCCCEEEEEEEEe
Q psy7363 386 GSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGKVGDSVKKTKEDVVVKRGKSEEIVLHVS 447 (552)
Q Consensus 386 G~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~e~~~v~l~I~ 447 (552)
+-+|.+.+.|.|..+.+ +.+.=..-.++.+|...++= .....++++|.++..+++.+.
T Consensus 17 ~t~~~~~l~V~NPN~~~---l~i~gl~y~v~lng~~la~G-~s~~~~~I~~~g~~~v~v~~~ 74 (136)
T 3but_A 17 QTEIVALAKVRNEDVVP---IVVSGYHYTIEMNGVKVADG-YENSPVTVKPASATTLKFSLR 74 (136)
T ss_dssp EEEEEEEEEEECCSSSC---EEEEEEEEEEEETTEEEEEE-EECCCEEECTTCEEEEEEEEE
T ss_pred EEEEEEEEEEeCCCCcc---eeeeceEEEEEECCEEEEee-eecCceEECCCCcEEEEEEEE
Confidence 45689999999998765 44444477888899665542 234678899988666655554
No 46
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=26.39 E-value=3.5e+02 Score=27.57 Aligned_cols=91 Identities=7% Similarity=0.049 Sum_probs=57.5
Q ss_pred CCCCCCCEEEEEEEEeCCCCCceEEEEEEEEEEEeEcCc--cccceeeEeeEEEEcCCCEEEEEEEEehhh-hhccCC-C
Q psy7363 382 DIVIGSPFSVVVKMNNKSRDQDYTVTVILRVDAVTYTGK--VGDSVKKTKEDVVVKRGKSEEIVLHVSYEE-YYKRLV-D 457 (552)
Q Consensus 382 ~~~iG~Df~l~v~l~N~s~~~~r~v~~~l~a~~v~YtG~--~~~~~~~~~~~v~L~p~e~~~v~l~I~y~e-Y~~~L~-d 457 (552)
.+.+|++.+-+++++|.+.-+ -+.++. .. -++. +..-+.-...+.+|.|+++..|.+.+.-++ ....|- .
T Consensus 41 ~v~~~~~~~~~l~i~N~g~~p-a~f~f~--~~---~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~~~~~~~ln~g 114 (366)
T 3qis_A 41 NVKFRQLQKEKFQISNNGQVP-CHFSFI--PK---LNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSG 114 (366)
T ss_dssp EECBTCCEEEEEEEEECSSSC-EEEEEE--CC---TTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCTTTHHHHHHT
T ss_pred eeeeCCeEEEEEEEEecCCce-EEEEEE--eC---CCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEECHHHHHHHhcC
Confidence 478999999999999999877 444442 21 1121 112244566788999999999999997665 122221 1
Q ss_pred CCcEEEEEEEEEccCCceEEE
Q psy7363 458 QADFNIACLATVHDTNFEYFA 478 (552)
Q Consensus 458 ~~~i~v~a~a~v~et~~~~~a 478 (552)
...+.=..+.++...+..++.
T Consensus 115 ~~~l~diLvL~ve~G~d~FI~ 135 (366)
T 3qis_A 115 EDKIEDILVLHLDRGKDYFLT 135 (366)
T ss_dssp SSCSCEEEEEEETTSCEEEEE
T ss_pred ccccceEEEEEEeCCCcEEEE
Confidence 223444556788776644433
No 47
>1ny7_1 Cowpea mosaic virus, small (S) subunit; comovirus, viral coat protein, cowpea mosaic virus (CPMV), icosahedral virus; 3.00A {Cowpea mosaic virus} SCOP: b.121.4.2 PDB: 2bfu_S
Probab=21.17 E-value=41 Score=32.28 Aligned_cols=10 Identities=0% Similarity=0.282 Sum_probs=9.1
Q ss_pred eeeeeeeecc
Q psy7363 227 HMWNEVWMTR 236 (552)
Q Consensus 227 HVWnE~WM~R 236 (552)
.|||+|||.|
T Consensus 9 ~v~n~~~~vr 18 (189)
T 1ny7_1 9 DVYSPCMIAS 18 (189)
T ss_dssp SCCEEEEEEE
T ss_pred ccccceeEEc
Confidence 4899999999
Done!