Query psy7365
Match_columns 601
No_of_seqs 777 out of 3835
Neff 6.6
Searched_HMMs 46136
Date Sat Aug 17 00:51:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7365.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7365hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10762 D-ribose transporter 100.0 2.4E-65 5.1E-70 568.8 35.0 379 49-517 4-482 (501)
2 PRK10261 glutathione transport 100.0 6.1E-65 1.3E-69 578.6 38.1 388 47-519 10-553 (623)
3 PRK13549 xylose transporter AT 100.0 4E-65 8.7E-70 567.6 35.3 379 49-517 5-492 (506)
4 COG1123 ATPase components of v 100.0 8.7E-65 1.9E-69 552.3 33.8 391 49-524 5-524 (539)
5 PRK09700 D-allose transporter 100.0 1.4E-64 3E-69 563.8 35.0 377 48-514 4-493 (510)
6 PRK11288 araG L-arabinose tran 100.0 2.2E-64 4.7E-69 561.1 35.0 379 49-517 4-483 (501)
7 PRK15134 microcin C ABC transp 100.0 2.9E-64 6.3E-69 563.5 35.0 386 49-519 5-515 (529)
8 TIGR03269 met_CoM_red_A2 methy 100.0 6.8E-64 1.5E-68 559.4 35.7 380 51-520 2-518 (520)
9 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-63 2.9E-68 555.9 35.6 376 49-518 11-491 (510)
10 TIGR02633 xylG D-xylose ABC tr 100.0 5.6E-63 1.2E-67 549.6 35.2 376 50-515 2-488 (500)
11 PRK10982 galactose/methyl gala 100.0 1E-62 2.2E-67 546.3 35.6 373 52-514 1-475 (491)
12 TIGR01257 rim_protein retinal- 100.0 2.5E-61 5.4E-66 590.1 45.3 226 373-601 2013-2244(2272)
13 COG1129 MglA ABC-type sugar tr 100.0 3.9E-62 8.4E-67 528.4 32.8 380 45-514 4-485 (500)
14 COG4172 ABC-type uncharacteriz 100.0 8.5E-61 1.8E-65 495.3 30.5 396 45-525 2-522 (534)
15 PRK10938 putative molybdenum t 100.0 2.3E-59 5E-64 519.4 28.0 364 50-511 4-484 (490)
16 COG3845 ABC-type uncharacteriz 100.0 9.7E-59 2.1E-63 493.1 27.5 379 48-516 3-489 (501)
17 PRK15064 ABC transporter ATP-b 100.0 2.6E-57 5.6E-62 507.6 32.9 359 51-520 3-526 (530)
18 PRK11819 putative ABC transpor 100.0 3.3E-57 7.2E-62 509.3 32.6 366 46-519 3-533 (556)
19 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3E-56 6.6E-61 501.2 32.5 363 49-519 4-531 (552)
20 PRK13409 putative ATPase RIL; 100.0 5.7E-55 1.2E-59 492.3 27.8 355 53-513 77-536 (590)
21 PRK10636 putative ABC transpor 100.0 2.4E-53 5.2E-58 484.4 31.5 357 50-519 2-517 (638)
22 PRK11147 ABC transporter ATPas 100.0 5E-52 1.1E-56 473.8 30.8 359 49-517 3-526 (635)
23 PLN03073 ABC transporter F fam 100.0 2.9E-50 6.2E-55 462.1 26.4 370 47-520 175-715 (718)
24 KOG0055|consensus 100.0 8.2E-49 1.8E-53 454.0 27.8 205 49-345 350-568 (1228)
25 COG1126 GlnQ ABC-type polar am 100.0 6.8E-49 1.5E-53 380.3 15.8 211 49-349 2-221 (240)
26 COG0488 Uup ATPase components 100.0 2.5E-47 5.4E-52 421.8 27.3 358 48-519 2-525 (530)
27 COG1125 OpuBA ABC-type proline 100.0 1.6E-48 3.4E-53 384.7 14.6 212 50-350 2-222 (309)
28 TIGR00956 3a01205 Pleiotropic 100.0 4E-46 8.7E-51 454.4 35.5 143 373-515 837-989 (1394)
29 COG1116 TauB ABC-type nitrate/ 100.0 1E-47 2.2E-52 381.6 15.8 198 50-340 4-207 (248)
30 COG1135 AbcC ABC-type metal io 100.0 9.9E-48 2.1E-52 389.1 15.1 214 50-348 2-226 (339)
31 PLN03140 ABC transporter G fam 100.0 2.3E-45 5E-50 447.0 34.4 150 373-522 954-1117(1470)
32 COG3839 MalK ABC-type sugar tr 100.0 1.9E-45 4.1E-50 384.1 15.5 212 50-351 4-221 (338)
33 COG3842 PotA ABC-type spermidi 100.0 1.7E-45 3.8E-50 386.2 14.1 213 48-350 4-223 (352)
34 PTZ00265 multidrug resistance 100.0 4.5E-44 9.8E-49 437.2 27.9 140 372-519 1296-1452(1466)
35 COG2884 FtsE Predicted ATPase 100.0 2E-44 4.4E-49 342.2 14.8 208 50-346 2-219 (223)
36 COG4555 NatA ABC-type Na+ tran 100.0 9.7E-45 2.1E-49 347.1 12.5 210 51-349 3-218 (245)
37 PLN03130 ABC transporter C fam 100.0 5.4E-43 1.2E-47 431.3 29.7 140 371-520 1312-1462(1622)
38 PLN03232 ABC transporter C fam 100.0 4.3E-43 9.4E-48 431.3 28.8 141 371-521 1309-1460(1495)
39 COG1127 Ttg2A ABC-type transpo 100.0 8.4E-44 1.8E-48 349.7 14.9 216 47-351 6-233 (263)
40 COG1122 CbiO ABC-type cobalt t 100.0 1.9E-43 4.1E-48 355.1 17.4 212 49-348 3-223 (235)
41 COG1131 CcmA ABC-type multidru 100.0 2.9E-43 6.3E-48 366.1 18.5 213 50-351 5-224 (293)
42 TIGR00957 MRP_assoc_pro multi 100.0 5.2E-42 1.1E-46 422.3 31.8 140 371-520 1359-1509(1522)
43 PRK13537 nodulation ABC transp 100.0 6.1E-43 1.3E-47 366.0 19.1 215 46-350 4-224 (306)
44 COG1118 CysA ABC-type sulfate/ 100.0 4.3E-43 9.4E-48 354.6 14.6 210 51-350 4-224 (345)
45 COG4175 ProV ABC-type proline/ 100.0 2.3E-43 5E-48 357.0 11.9 202 65-351 40-252 (386)
46 COG1136 SalX ABC-type antimicr 100.0 2.6E-42 5.7E-47 342.0 18.6 206 51-342 3-220 (226)
47 PRK13536 nodulation factor exp 100.0 4.3E-42 9.4E-47 364.2 19.5 217 44-350 36-258 (340)
48 TIGR02314 ABC_MetN D-methionin 100.0 5.6E-42 1.2E-46 363.2 19.5 213 50-347 2-224 (343)
49 COG4152 ABC-type uncharacteriz 100.0 4.2E-42 9.1E-47 337.3 14.2 214 51-357 4-223 (300)
50 PTZ00243 ABC transporter; Prov 100.0 1.4E-40 3E-45 409.3 31.0 140 371-520 1383-1534(1560)
51 COG1137 YhbG ABC-type (unclass 100.0 5.4E-42 1.2E-46 327.9 12.5 210 51-350 6-225 (243)
52 PRK11432 fbpC ferric transport 100.0 2.8E-41 6E-46 359.3 18.6 211 49-349 6-222 (351)
53 TIGR03265 PhnT2 putative 2-ami 100.0 3.2E-41 7E-46 359.2 18.7 210 50-349 5-220 (353)
54 PRK11650 ugpC glycerol-3-phosp 100.0 3.6E-41 7.8E-46 359.2 18.9 210 50-348 4-219 (356)
55 KOG0059|consensus 100.0 3.8E-41 8.3E-46 395.7 19.8 228 373-601 641-870 (885)
56 COG4525 TauB ABC-type taurine 100.0 3.3E-41 7.3E-46 321.1 14.8 205 52-347 6-218 (259)
57 COG0411 LivG ABC-type branched 100.0 9E-41 2E-45 329.7 17.3 214 49-351 4-237 (250)
58 TIGR01271 CFTR_protein cystic 100.0 1.6E-39 3.4E-44 399.4 31.8 138 372-519 1292-1440(1490)
59 COG1120 FepC ABC-type cobalami 100.0 4.3E-41 9.3E-46 339.5 14.6 210 51-349 4-224 (258)
60 TIGR03258 PhnT 2-aminoethylpho 100.0 1.2E-40 2.6E-45 355.6 18.6 209 51-349 7-224 (362)
61 PRK09452 potA putrescine/sperm 100.0 1.7E-40 3.7E-45 355.9 18.5 209 50-348 15-229 (375)
62 TIGR01186 proV glycine betaine 100.0 3.7E-40 8E-45 351.4 20.1 199 65-348 5-214 (363)
63 TIGR01188 drrA daunorubicin re 100.0 2.9E-40 6.3E-45 345.2 18.8 198 66-349 6-209 (302)
64 TIGR01288 nodI ATP-binding ABC 100.0 3.1E-40 6.8E-45 345.1 18.7 210 49-348 4-219 (303)
65 TIGR03522 GldA_ABC_ATP gliding 100.0 3.9E-40 8.5E-45 344.1 19.4 209 51-350 4-218 (301)
66 COG3638 ABC-type phosphate/pho 100.0 7.1E-41 1.5E-45 328.2 12.6 216 48-351 2-235 (258)
67 PRK11607 potG putrescine trans 100.0 3.7E-40 8E-45 353.7 19.3 211 49-349 19-235 (377)
68 COG1124 DppF ABC-type dipeptid 100.0 1.5E-40 3.2E-45 327.9 14.8 215 49-350 3-228 (252)
69 cd03266 ABC_NatA_sodium_export 100.0 6.5E-40 1.4E-44 326.0 18.2 209 51-345 3-217 (218)
70 cd03261 ABC_Org_Solvent_Resist 100.0 8.5E-40 1.8E-44 329.1 18.6 208 52-348 3-221 (235)
71 PRK11153 metN DL-methionine tr 100.0 8.5E-40 1.8E-44 347.4 19.4 212 51-347 3-224 (343)
72 TIGR00960 3a0501s02 Type II (G 100.0 8.4E-40 1.8E-44 324.9 18.0 204 51-342 3-216 (216)
73 cd03265 ABC_DrrA DrrA is the A 100.0 9.6E-40 2.1E-44 325.6 18.1 208 51-347 2-215 (220)
74 PRK10851 sulfate/thiosulfate t 100.0 8.5E-40 1.8E-44 348.3 18.4 208 51-348 4-221 (353)
75 COG1117 PstB ABC-type phosphat 100.0 2.6E-40 5.7E-45 319.4 12.4 210 47-348 5-232 (253)
76 PRK11000 maltose/maltodextrin 100.0 1.1E-39 2.5E-44 349.5 18.4 209 50-348 4-218 (369)
77 cd03259 ABC_Carb_Solutes_like 100.0 2.1E-39 4.6E-44 321.3 17.9 204 52-345 3-212 (213)
78 PRK13637 cbiO cobalt transport 100.0 3.3E-39 7.2E-44 334.9 19.4 214 50-348 3-229 (287)
79 PRK10070 glycine betaine trans 100.0 2.7E-39 5.9E-44 348.6 19.4 207 52-347 31-248 (400)
80 PRK13651 cobalt transporter AT 100.0 3.2E-39 7E-44 337.7 18.5 214 50-349 3-250 (305)
81 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2E-39 4.2E-44 326.0 16.0 207 49-348 4-222 (254)
82 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.2E-39 9.2E-44 320.1 18.2 205 52-342 3-218 (218)
83 COG1126 GlnQ ABC-type polar am 100.0 3.3E-39 7.1E-44 313.0 16.7 203 312-520 12-226 (240)
84 cd03264 ABC_drug_resistance_li 100.0 5.9E-39 1.3E-43 317.7 17.9 204 51-345 2-210 (211)
85 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.9E-39 1.9E-43 318.6 18.9 206 52-346 3-216 (220)
86 PRK13643 cbiO cobalt transport 100.0 7.4E-39 1.6E-43 332.5 18.9 213 50-349 2-229 (288)
87 PRK11629 lolD lipoprotein tran 100.0 1.4E-38 3.1E-43 320.0 19.4 212 49-346 5-227 (233)
88 cd03301 ABC_MalK_N The N-termi 100.0 9.1E-39 2E-43 316.6 17.7 205 51-345 2-212 (213)
89 cd03263 ABC_subfamily_A The AB 100.0 1.2E-38 2.6E-43 317.4 18.2 208 52-348 3-216 (220)
90 PRK13634 cbiO cobalt transport 100.0 1.1E-38 2.4E-43 331.5 18.6 214 50-348 3-230 (290)
91 PRK13647 cbiO cobalt transport 100.0 1.1E-38 2.4E-43 328.9 18.2 211 49-348 4-222 (274)
92 TIGR02673 FtsE cell division A 100.0 1.4E-38 3E-43 315.6 18.0 202 51-341 3-214 (214)
93 PRK15079 oligopeptide ABC tran 100.0 1.4E-38 3.1E-43 336.2 19.3 216 48-348 7-246 (331)
94 cd03258 ABC_MetN_methionine_tr 100.0 1.6E-38 3.4E-43 319.4 18.5 212 51-347 3-224 (233)
95 cd03219 ABC_Mj1267_LivG_branch 100.0 1.8E-38 4E-43 319.3 18.6 207 52-348 3-227 (236)
96 TIGR03415 ABC_choXWV_ATP choli 100.0 7.7E-39 1.7E-43 343.0 16.8 231 24-348 4-249 (382)
97 PRK00349 uvrA excinuclease ABC 100.0 2.8E-37 6E-42 360.6 31.2 296 139-520 433-928 (943)
98 PRK10908 cell division protein 100.0 2E-38 4.3E-43 316.5 18.3 205 51-344 3-217 (222)
99 cd03218 ABC_YhbG The ABC trans 100.0 2.3E-38 4.9E-43 317.8 18.3 206 52-347 3-216 (232)
100 COG4152 ABC-type uncharacteriz 100.0 8E-38 1.7E-42 307.2 21.6 269 314-601 14-290 (300)
101 cd03269 ABC_putative_ATPase Th 100.0 1.8E-38 3.8E-43 314.1 17.2 201 52-345 3-209 (210)
102 PRK13650 cbiO cobalt transport 100.0 1.7E-38 3.7E-43 328.3 17.7 212 50-348 5-224 (279)
103 cd03292 ABC_FtsE_transporter F 100.0 2.8E-38 6.1E-43 313.1 18.5 202 52-342 3-214 (214)
104 cd03225 ABC_cobalt_CbiO_domain 100.0 2.5E-38 5.3E-43 313.1 18.0 202 52-341 2-211 (211)
105 cd03268 ABC_BcrA_bacitracin_re 100.0 1.9E-38 4E-43 313.5 16.9 200 51-345 2-207 (208)
106 PRK13631 cbiO cobalt transport 100.0 2.8E-38 6.1E-43 332.6 19.1 215 48-349 20-261 (320)
107 PRK13641 cbiO cobalt transport 100.0 2.9E-38 6.2E-43 327.9 18.9 214 50-349 3-230 (287)
108 cd03296 ABC_CysA_sulfate_impor 100.0 2.3E-38 5E-43 319.7 17.7 208 51-348 4-221 (239)
109 PRK09536 btuD corrinoid ABC tr 100.0 2E-38 4.3E-43 342.2 18.1 211 49-349 3-224 (402)
110 cd03226 ABC_cobalt_CbiO_domain 100.0 2.9E-38 6.3E-43 311.6 17.6 197 52-343 2-205 (205)
111 TIGR02211 LolD_lipo_ex lipopro 100.0 4.1E-38 8.9E-43 313.7 18.3 207 51-343 3-220 (221)
112 cd03256 ABC_PhnC_transporter A 100.0 4.2E-38 9E-43 317.5 18.0 209 52-348 3-229 (241)
113 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.2E-38 1.1E-42 317.7 18.5 208 52-347 3-219 (242)
114 PRK13646 cbiO cobalt transport 100.0 4.4E-38 9.4E-43 326.4 18.4 213 51-348 4-230 (286)
115 cd03262 ABC_HisP_GlnQ_permease 100.0 5.5E-38 1.2E-42 310.8 18.3 201 52-342 3-213 (213)
116 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.8E-38 1.3E-42 322.7 18.7 209 51-348 26-245 (269)
117 PRK09493 glnQ glutamine ABC tr 100.0 6.3E-38 1.4E-42 316.5 18.3 208 51-348 3-220 (240)
118 PRK13636 cbiO cobalt transport 100.0 6.2E-38 1.3E-42 324.8 18.6 215 47-349 3-227 (283)
119 PRK11831 putative ABC transpor 100.0 7.2E-38 1.6E-42 321.9 18.5 212 48-348 6-228 (269)
120 cd03260 ABC_PstB_phosphate_tra 100.0 6.5E-38 1.4E-42 313.7 17.7 206 51-348 2-224 (227)
121 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7E-38 1.5E-42 315.6 17.9 208 51-348 3-216 (236)
122 TIGR02315 ABC_phnC phosphonate 100.0 4.8E-38 1E-42 317.6 16.6 210 51-348 3-230 (243)
123 PRK13635 cbiO cobalt transport 100.0 7.2E-38 1.6E-42 323.7 18.3 212 49-348 5-224 (279)
124 PRK11308 dppF dipeptide transp 100.0 9.6E-38 2.1E-42 329.5 19.6 217 48-349 4-240 (327)
125 PRK10584 putative ABC transpor 100.0 1.3E-37 2.8E-42 311.7 18.8 210 49-344 6-226 (228)
126 PRK11264 putative amino-acid A 100.0 1.5E-37 3.3E-42 315.4 19.0 209 49-347 3-227 (250)
127 cd03224 ABC_TM1139_LivF_branch 100.0 9.8E-38 2.1E-42 311.0 17.1 205 51-347 2-215 (222)
128 cd03257 ABC_NikE_OppD_transpor 100.0 1.4E-37 3.1E-42 310.8 18.2 210 51-345 3-227 (228)
129 PRK11248 tauB taurine transpor 100.0 1.3E-37 2.9E-42 317.7 18.3 203 51-346 3-213 (255)
130 TIGR01188 drrA daunorubicin re 100.0 1.4E-36 3E-41 317.5 25.6 278 314-601 5-296 (302)
131 PRK11022 dppD dipeptide transp 100.0 1.6E-37 3.6E-42 327.7 18.7 216 49-349 3-239 (326)
132 PRK13644 cbiO cobalt transport 100.0 1.7E-37 3.7E-42 320.0 18.0 208 51-348 3-219 (274)
133 TIGR00972 3a0107s01c2 phosphat 100.0 2.5E-37 5.5E-42 313.6 18.6 206 51-348 3-227 (247)
134 cd03235 ABC_Metallic_Cations A 100.0 1.5E-37 3.3E-42 308.0 16.3 196 52-341 2-209 (213)
135 PRK13638 cbiO cobalt transport 100.0 2.3E-37 5E-42 318.4 18.2 208 51-348 3-220 (271)
136 PRK13652 cbiO cobalt transport 100.0 2.8E-37 6E-42 318.9 18.6 212 50-349 4-223 (277)
137 PRK10895 lipopolysaccharide AB 100.0 2.1E-37 4.5E-42 313.0 17.2 209 50-348 4-221 (241)
138 PRK13633 cobalt transporter AT 100.0 2.4E-37 5.3E-42 319.8 18.1 213 50-348 5-228 (280)
139 PRK10619 histidine/lysine/argi 100.0 3.8E-37 8.2E-42 314.2 19.2 208 50-347 6-235 (257)
140 PRK13548 hmuV hemin importer A 100.0 3.1E-37 6.7E-42 315.4 18.1 216 50-348 3-225 (258)
141 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.4E-37 5.2E-42 306.2 16.8 203 51-345 2-210 (211)
142 PRK11300 livG leucine/isoleuci 100.0 2.9E-37 6.3E-42 314.2 17.8 212 48-348 4-238 (255)
143 TIGR03411 urea_trans_UrtD urea 100.0 4.2E-37 9E-42 310.8 18.7 208 50-348 3-226 (242)
144 KOG0054|consensus 100.0 1.7E-36 3.7E-41 358.9 26.8 141 371-521 1213-1364(1381)
145 COG1125 OpuBA ABC-type proline 100.0 2.5E-37 5.5E-42 305.4 16.0 205 311-521 10-227 (309)
146 cd03267 ABC_NatA_like Similar 100.0 6.6E-37 1.4E-41 308.8 19.4 197 64-345 32-235 (236)
147 PRK09473 oppD oligopeptide tra 100.0 5.4E-37 1.2E-41 324.2 19.6 217 48-349 11-247 (330)
148 TIGR01257 rim_protein retinal- 100.0 1.2E-36 2.6E-41 373.8 25.6 275 322-601 947-1272(2272)
149 COG0410 LivF ABC-type branched 100.0 1.5E-37 3.3E-42 304.6 14.1 212 50-351 4-224 (237)
150 COG4181 Predicted ABC-type tra 100.0 2.7E-37 5.9E-42 289.0 14.7 210 49-344 6-226 (228)
151 COG4555 NatA ABC-type Na+ tran 100.0 2.2E-37 4.8E-42 296.6 14.4 198 322-522 19-225 (245)
152 PRK11124 artP arginine transpo 100.0 5.9E-37 1.3E-41 309.8 18.4 208 51-348 4-225 (242)
153 PRK13639 cbiO cobalt transport 100.0 5.8E-37 1.3E-41 316.2 18.6 209 51-348 3-221 (275)
154 PRK13649 cbiO cobalt transport 100.0 8.5E-37 1.8E-41 315.5 19.4 211 51-348 4-229 (280)
155 cd03297 ABC_ModC_molybdenum_tr 100.0 6.6E-37 1.4E-41 303.9 17.9 199 54-345 5-213 (214)
156 PRK14247 phosphate ABC transpo 100.0 1.1E-36 2.4E-41 309.3 19.1 208 50-348 4-229 (250)
157 PRK13537 nodulation ABC transp 100.0 5.3E-36 1.2E-40 313.7 24.8 268 314-601 19-295 (306)
158 PRK13648 cbiO cobalt transport 100.0 8.8E-37 1.9E-41 313.8 18.4 213 48-348 6-226 (269)
159 PRK11247 ssuB aliphatic sulfon 100.0 6.9E-37 1.5E-41 312.8 17.4 199 49-346 12-216 (257)
160 PRK15093 antimicrobial peptide 100.0 8.9E-37 1.9E-41 322.7 18.7 215 49-348 3-243 (330)
161 PRK11614 livF leucine/isoleuci 100.0 6.1E-37 1.3E-41 308.8 16.6 208 49-348 5-221 (237)
162 TIGR01277 thiQ thiamine ABC tr 100.0 1E-36 2.2E-41 302.5 17.7 203 52-346 3-211 (213)
163 PRK14268 phosphate ABC transpo 100.0 1.4E-36 3E-41 310.4 19.2 208 49-348 12-237 (258)
164 TIGR02769 nickel_nikE nickel i 100.0 1.1E-36 2.4E-41 312.3 18.6 214 50-348 3-235 (265)
165 COG3840 ThiQ ABC-type thiamine 100.0 1.8E-37 3.9E-42 292.9 11.5 204 52-348 4-214 (231)
166 TIGR03005 ectoine_ehuA ectoine 100.0 1.2E-36 2.7E-41 309.4 18.6 208 51-347 2-230 (252)
167 PRK15112 antimicrobial peptide 100.0 1.1E-36 2.3E-41 312.9 18.2 214 49-347 4-233 (267)
168 COG1123 ATPase components of v 100.0 1.1E-36 2.5E-41 332.3 19.0 218 46-348 277-514 (539)
169 TIGR02142 modC_ABC molybdenum 100.0 9.5E-37 2.1E-41 325.4 18.0 202 54-348 4-216 (354)
170 PRK13645 cbiO cobalt transport 100.0 1.4E-36 3.1E-41 315.3 18.8 214 50-348 7-235 (289)
171 PRK14267 phosphate ABC transpo 100.0 1.5E-36 3.2E-41 308.9 18.4 209 49-348 4-232 (253)
172 cd03234 ABCG_White The White s 100.0 1.9E-36 4.1E-41 303.2 19.0 210 48-345 2-225 (226)
173 PRK14273 phosphate ABC transpo 100.0 1.7E-36 3.7E-41 308.8 18.8 208 49-348 7-233 (254)
174 PRK10575 iron-hydroxamate tran 100.0 1.2E-36 2.6E-41 312.0 17.7 212 48-348 10-232 (265)
175 COG1131 CcmA ABC-type multidru 100.0 2.2E-36 4.7E-41 314.6 19.6 206 315-526 18-233 (293)
176 PRK13632 cbiO cobalt transport 100.0 1.2E-36 2.6E-41 313.2 17.4 211 49-347 7-225 (271)
177 PRK14242 phosphate transporter 100.0 1.9E-36 4.1E-41 308.1 18.6 209 48-348 5-232 (253)
178 TIGR01978 sufC FeS assembly AT 100.0 2.1E-36 4.6E-41 305.4 18.4 208 51-348 2-229 (243)
179 PRK13642 cbiO cobalt transport 100.0 1.8E-36 3.9E-41 312.9 18.2 212 50-348 5-224 (277)
180 TIGR03608 L_ocin_972_ABC putat 100.0 2E-36 4.2E-41 298.2 17.6 195 52-337 1-206 (206)
181 PRK11231 fecE iron-dicitrate t 100.0 1.2E-36 2.6E-41 310.2 16.4 208 50-347 3-221 (255)
182 PRK13640 cbiO cobalt transport 100.0 1.8E-36 3.8E-41 313.7 17.8 212 49-348 5-227 (282)
183 TIGR03873 F420-0_ABC_ATP propo 100.0 2.3E-36 5E-41 308.3 18.2 208 51-348 3-221 (256)
184 cd03299 ABC_ModC_like Archeal 100.0 3.3E-36 7.1E-41 303.5 18.7 205 52-347 3-213 (235)
185 TIGR03410 urea_trans_UrtE urea 100.0 2E-36 4.4E-41 303.5 16.9 205 52-348 3-216 (230)
186 PRK14274 phosphate ABC transpo 100.0 2.7E-36 5.8E-41 308.3 18.1 215 43-349 6-239 (259)
187 PRK11144 modC molybdate transp 100.0 1.8E-36 3.9E-41 323.0 17.5 198 54-348 5-213 (352)
188 PRK09984 phosphonate/organopho 100.0 2.9E-36 6.2E-41 308.6 16.9 211 49-348 4-237 (262)
189 PRK14250 phosphate ABC transpo 100.0 2.6E-36 5.6E-41 305.4 16.2 204 51-348 5-216 (241)
190 PRK10771 thiQ thiamine transpo 100.0 3.4E-36 7.3E-41 302.6 16.8 206 51-348 3-214 (232)
191 PRK10261 glutathione transport 100.0 3.9E-36 8.5E-41 342.5 19.4 217 47-348 311-548 (623)
192 PRK10744 pstB phosphate transp 100.0 5E-36 1.1E-40 306.5 18.3 207 50-348 14-239 (260)
193 PRK10253 iron-enterobactin tra 100.0 3.5E-36 7.7E-41 308.6 17.1 209 51-348 9-228 (265)
194 PRK14269 phosphate ABC transpo 100.0 5.9E-36 1.3E-40 303.5 18.5 207 50-348 3-225 (246)
195 PRK14235 phosphate transporter 100.0 6.6E-36 1.4E-40 307.0 18.8 209 48-348 18-246 (267)
196 TIGR02982 heterocyst_DevA ABC 100.0 5.2E-36 1.1E-40 298.9 17.5 206 51-342 3-219 (220)
197 cd03300 ABC_PotA_N PotA is an 100.0 7.9E-36 1.7E-40 300.0 18.9 206 52-347 3-214 (232)
198 TIGR03740 galliderm_ABC gallid 100.0 5.4E-36 1.2E-40 299.2 17.5 200 52-348 3-208 (223)
199 PRK14241 phosphate transporter 100.0 7.2E-36 1.6E-40 304.9 18.8 208 50-348 5-237 (258)
200 TIGR00630 uvra excinuclease AB 100.0 1.1E-34 2.3E-39 338.4 30.6 125 386-517 789-923 (924)
201 TIGR03522 GldA_ABC_ATP gliding 100.0 5.1E-35 1.1E-39 305.6 24.8 273 314-601 14-296 (301)
202 PRK14256 phosphate ABC transpo 100.0 9.8E-36 2.1E-40 302.8 18.8 208 50-348 5-231 (252)
203 TIGR01187 potA spermidine/putr 100.0 6.4E-36 1.4E-40 315.6 18.0 184 79-348 2-185 (325)
204 TIGR01184 ntrCD nitrate transp 100.0 9.7E-36 2.1E-40 299.2 18.0 189 69-346 1-197 (230)
205 PRK13536 nodulation factor exp 100.0 7.7E-35 1.7E-39 308.8 25.4 270 312-601 51-329 (340)
206 PRK13538 cytochrome c biogenes 100.0 7.2E-36 1.6E-40 294.6 16.3 194 51-337 3-202 (204)
207 COG1135 AbcC ABC-type metal io 100.0 4.7E-36 1E-40 304.3 15.2 195 322-519 23-231 (339)
208 TIGR00968 3a0106s01 sulfate AB 100.0 1.1E-35 2.3E-40 300.1 17.7 208 51-348 2-215 (237)
209 PRK14239 phosphate transporter 100.0 1.3E-35 2.7E-40 301.7 18.3 209 48-348 4-231 (252)
210 PRK14240 phosphate transporter 100.0 1.8E-35 4E-40 300.3 19.4 207 50-348 4-229 (250)
211 PRK14259 phosphate ABC transpo 100.0 1.2E-35 2.5E-40 305.6 18.1 202 47-341 11-230 (269)
212 PRK11701 phnK phosphonate C-P 100.0 1.6E-35 3.5E-40 302.4 18.4 211 49-348 6-236 (258)
213 COG4598 HisP ABC-type histidin 100.0 2.2E-36 4.7E-41 284.8 10.6 213 47-349 4-237 (256)
214 PRK14275 phosphate ABC transpo 100.0 2.1E-35 4.5E-40 306.4 19.0 211 46-348 36-265 (286)
215 PRK14270 phosphate ABC transpo 100.0 1.7E-35 3.7E-40 300.9 17.9 208 49-348 4-230 (251)
216 PRK14248 phosphate ABC transpo 100.0 2E-35 4.3E-40 303.5 18.3 208 49-348 21-247 (268)
217 PRK14254 phosphate ABC transpo 100.0 2.4E-35 5.2E-40 305.8 18.9 212 43-347 33-263 (285)
218 PRK13547 hmuV hemin importer A 100.0 1.4E-35 3E-40 305.6 16.9 218 51-348 3-239 (272)
219 PRK00635 excinuclease ABC subu 100.0 3.4E-34 7.4E-39 347.2 31.3 135 383-519 759-906 (1809)
220 PRK14245 phosphate ABC transpo 100.0 2.8E-35 6E-40 299.1 18.2 207 50-348 4-229 (250)
221 COG0444 DppD ABC-type dipeptid 100.0 3.1E-35 6.8E-40 301.6 18.6 214 51-349 3-239 (316)
222 PRK14249 phosphate ABC transpo 100.0 3.4E-35 7.4E-40 298.7 18.7 207 50-348 5-230 (251)
223 PRK13549 xylose transporter AT 100.0 2.1E-35 4.5E-40 329.2 18.2 216 46-348 256-489 (506)
224 PRK14262 phosphate ABC transpo 100.0 3.9E-35 8.4E-40 297.9 18.5 208 49-348 3-229 (250)
225 PRK14272 phosphate ABC transpo 100.0 4.5E-35 9.8E-40 297.6 18.5 208 50-348 5-231 (252)
226 TIGR02770 nickel_nikD nickel i 100.0 3.6E-35 7.9E-40 294.8 17.5 195 68-348 1-210 (230)
227 PRK14237 phosphate transporter 100.0 5.3E-35 1.1E-39 300.3 18.9 208 49-348 20-246 (267)
228 PRK14253 phosphate ABC transpo 100.0 5.8E-35 1.3E-39 296.5 18.5 207 50-348 4-228 (249)
229 PRK14251 phosphate ABC transpo 100.0 5.1E-35 1.1E-39 297.2 18.0 207 50-348 5-230 (251)
230 TIGR02324 CP_lyasePhnL phospho 100.0 5.4E-35 1.2E-39 292.0 17.9 202 51-338 3-223 (224)
231 PRK14244 phosphate ABC transpo 100.0 5.5E-35 1.2E-39 297.1 18.0 206 51-348 7-232 (251)
232 TIGR03269 met_CoM_red_A2 methy 100.0 4.8E-35 1E-39 327.3 19.1 216 47-348 277-512 (520)
233 PRK10247 putative ABC transpor 100.0 5.1E-35 1.1E-39 293.0 17.2 197 49-338 7-211 (225)
234 PRK15134 microcin C ABC transp 100.0 5.3E-35 1.1E-39 327.6 19.2 217 46-348 272-510 (529)
235 COG1127 Ttg2A ABC-type transpo 100.0 4E-35 8.7E-40 288.5 15.9 195 322-519 25-235 (263)
236 PRK14261 phosphate ABC transpo 100.0 7.1E-35 1.5E-39 296.7 18.2 208 49-348 6-232 (253)
237 PRK13543 cytochrome c biogenes 100.0 7.8E-35 1.7E-39 289.4 18.0 197 48-339 10-212 (214)
238 PRK10419 nikE nickel transport 100.0 9.3E-35 2E-39 298.7 19.1 215 49-348 3-236 (268)
239 KOG0927|consensus 100.0 5.3E-35 1.2E-39 313.1 17.8 367 52-520 78-597 (614)
240 PRK03695 vitamin B12-transport 100.0 8.1E-35 1.8E-39 295.8 18.4 208 52-348 3-217 (248)
241 PRK10418 nikD nickel transport 100.0 1E-34 2.2E-39 296.0 18.4 206 50-348 5-225 (254)
242 PRK09700 D-allose transporter 100.0 6.4E-35 1.4E-39 325.5 18.3 208 47-346 263-491 (510)
243 PRK14236 phosphate transporter 100.0 1.3E-34 2.7E-39 298.3 18.9 208 49-348 25-251 (272)
244 TIGR02633 xylG D-xylose ABC tr 100.0 5.2E-35 1.1E-39 325.5 17.0 213 47-346 255-485 (500)
245 TIGR01288 nodI ATP-binding ABC 100.0 7.4E-34 1.6E-38 297.1 24.5 269 313-601 15-292 (303)
246 PRK14238 phosphate transporter 100.0 1.1E-34 2.3E-39 298.8 17.9 210 47-348 22-250 (271)
247 PRK14246 phosphate ABC transpo 100.0 2.1E-34 4.6E-39 294.4 19.8 212 46-348 7-236 (257)
248 PRK14260 phosphate ABC transpo 100.0 1.2E-34 2.7E-39 296.2 18.0 207 50-348 8-238 (259)
249 cd03231 ABC_CcmA_heme_exporter 100.0 9.4E-35 2E-39 286.1 16.2 191 51-337 2-198 (201)
250 TIGR02323 CP_lyasePhnK phospho 100.0 1.4E-34 3.1E-39 294.3 17.9 209 50-347 4-232 (253)
251 PRK14258 phosphate ABC transpo 100.0 1.6E-34 3.4E-39 295.8 18.3 209 50-348 8-240 (261)
252 PRK14243 phosphate transporter 100.0 1.2E-34 2.6E-39 297.2 17.5 208 48-348 9-243 (264)
253 cd03252 ABCC_Hemolysin The ABC 100.0 5.7E-35 1.2E-39 294.3 14.7 205 51-348 2-220 (237)
254 PRK14271 phosphate ABC transpo 100.0 1.8E-34 3.8E-39 298.0 18.7 209 48-348 20-246 (276)
255 KOG0062|consensus 100.0 1.1E-34 2.4E-39 309.2 17.1 350 52-517 83-567 (582)
256 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2.2E-34 4.8E-39 288.3 18.3 195 50-345 23-223 (224)
257 cd03251 ABCC_MsbA MsbA is an e 100.0 1.2E-34 2.6E-39 291.2 16.3 204 51-347 2-219 (234)
258 PRK14255 phosphate ABC transpo 100.0 2.4E-34 5.2E-39 292.5 18.5 208 49-348 5-231 (252)
259 cd03245 ABCC_bacteriocin_expor 100.0 9.7E-35 2.1E-39 289.2 14.8 198 51-345 4-219 (220)
260 TIGR01166 cbiO cobalt transpor 100.0 1.6E-34 3.4E-39 281.7 15.7 175 66-326 5-189 (190)
261 cd03233 ABC_PDR_domain1 The pl 100.0 2.1E-34 4.6E-39 284.1 16.8 187 51-345 5-201 (202)
262 CHL00131 ycf16 sulfate ABC tra 100.0 3.2E-34 7E-39 291.4 18.3 211 49-349 7-237 (252)
263 PRK14263 phosphate ABC transpo 100.0 3.7E-34 8.1E-39 293.2 18.9 209 47-348 6-240 (261)
264 COG4148 ModC ABC-type molybdat 100.0 2.1E-35 4.6E-40 294.8 9.3 179 79-348 30-213 (352)
265 PRK15056 manganese/iron transp 100.0 2.1E-34 4.6E-39 296.7 16.7 207 50-348 7-225 (272)
266 PRK14257 phosphate ABC transpo 100.0 4E-34 8.6E-39 302.2 19.1 211 49-349 80-309 (329)
267 COG4175 ProV ABC-type proline/ 100.0 1.1E-34 2.4E-39 294.1 13.7 208 313-525 38-260 (386)
268 PRK14265 phosphate ABC transpo 100.0 4.6E-34 9.9E-39 294.6 18.2 207 49-348 20-253 (274)
269 COG4161 ArtP ABC-type arginine 100.0 1.2E-34 2.5E-39 268.9 12.3 208 51-348 4-225 (242)
270 cd03248 ABCC_TAP TAP, the Tran 100.0 1.4E-34 3.1E-39 289.3 13.7 201 50-342 12-226 (226)
271 PRK10762 D-ribose transporter 100.0 3.9E-34 8.4E-39 318.6 18.6 206 48-348 256-479 (501)
272 PRK14266 phosphate ABC transpo 100.0 4.2E-34 9.1E-39 290.4 17.2 209 48-348 2-229 (250)
273 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.4E-34 7.5E-39 288.8 15.9 204 52-347 3-220 (238)
274 PRK14252 phosphate ABC transpo 100.0 8.4E-34 1.8E-38 290.9 18.9 209 48-348 15-244 (265)
275 COG3839 MalK ABC-type sugar tr 100.0 2.7E-34 5.9E-39 300.3 15.2 198 322-522 20-226 (338)
276 COG1122 CbiO ABC-type cobalt t 100.0 3.3E-34 7.1E-39 288.3 15.1 196 322-520 21-229 (235)
277 COG1116 TauB ABC-type nitrate/ 100.0 3.5E-34 7.6E-39 284.9 15.0 180 322-506 20-207 (248)
278 COG4674 Uncharacterized ABC-ty 100.0 4E-34 8.7E-39 272.8 14.2 213 48-351 4-233 (249)
279 PRK11288 araG L-arabinose tran 100.0 6.5E-34 1.4E-38 316.8 17.5 206 49-348 257-480 (501)
280 cd03254 ABCC_Glucan_exporter_l 100.0 6.8E-34 1.5E-38 284.8 15.8 203 51-347 4-220 (229)
281 PRK13539 cytochrome c biogenes 100.0 6.4E-34 1.4E-38 281.5 15.4 192 50-339 3-200 (207)
282 cd03244 ABCC_MRP_domain2 Domai 100.0 6.4E-34 1.4E-38 283.5 15.2 198 51-346 4-219 (221)
283 PRK09580 sufC cysteine desulfu 100.0 1.8E-33 3.8E-38 285.1 18.3 208 51-348 3-230 (248)
284 PRK13546 teichoic acids export 100.0 2.3E-33 4.9E-38 288.0 18.9 186 64-347 35-226 (264)
285 TIGR01189 ccmA heme ABC export 100.0 1.1E-33 2.4E-38 277.7 15.9 188 52-335 3-196 (198)
286 cd03215 ABC_Carb_Monos_II This 100.0 1.2E-33 2.5E-38 274.2 15.7 168 49-342 4-182 (182)
287 PRK14264 phosphate ABC transpo 100.0 2.2E-33 4.9E-38 293.8 19.1 218 36-348 35-284 (305)
288 COG4559 ABC-type hemin transpo 100.0 5.4E-34 1.2E-38 275.3 13.1 215 51-349 3-226 (259)
289 cd03230 ABC_DR_subfamily_A Thi 100.0 1.3E-33 2.8E-38 271.7 15.5 165 52-342 3-173 (173)
290 COG1245 Predicted ATPase, RNas 100.0 2.3E-33 5.1E-38 295.0 18.7 323 79-504 106-530 (591)
291 PRK13540 cytochrome c biogenes 100.0 1.3E-33 2.9E-38 277.6 15.2 189 51-335 3-197 (200)
292 cd03253 ABCC_ATM1_transporter 100.0 1.9E-33 4E-38 282.9 16.5 202 52-347 3-218 (236)
293 COG3842 PotA ABC-type spermidi 100.0 8.3E-34 1.8E-38 298.1 14.4 201 314-520 17-227 (352)
294 COG4604 CeuD ABC-type enteroch 100.0 1.9E-34 4.1E-39 275.5 7.9 212 50-350 2-222 (252)
295 cd03213 ABCG_EPDR ABCG transpo 100.0 3E-33 6.4E-38 274.2 16.2 178 51-345 5-193 (194)
296 cd03232 ABC_PDR_domain2 The pl 100.0 2.8E-33 6.2E-38 273.8 16.0 178 50-345 4-191 (192)
297 TIGR01186 proV glycine betaine 100.0 4.1E-33 8.9E-38 297.4 18.5 196 322-520 10-220 (363)
298 PRK10982 galactose/methyl gala 100.0 2.3E-33 5.1E-38 311.6 17.1 208 47-346 248-473 (491)
299 PRK11650 ugpC glycerol-3-phosp 100.0 4.2E-33 9.1E-38 297.3 18.2 200 314-519 16-224 (356)
300 PRK15439 autoinducer 2 ABC tra 100.0 2.7E-33 5.7E-38 312.5 17.4 208 46-348 265-487 (510)
301 cd03369 ABCC_NFT1 Domain 2 of 100.0 4.2E-33 9.1E-38 275.3 16.7 192 50-346 7-205 (207)
302 PRK09544 znuC high-affinity zi 100.0 2.8E-33 6E-38 285.3 15.4 192 49-347 4-203 (251)
303 TIGR03258 PhnT 2-aminoethylpho 100.0 5.5E-33 1.2E-37 296.8 18.3 196 322-520 22-229 (362)
304 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.3E-33 5E-38 289.4 14.8 201 51-350 4-222 (275)
305 cd03229 ABC_Class3 This class 100.0 2.9E-33 6.3E-38 270.4 14.2 167 52-341 3-178 (178)
306 TIGR03265 PhnT2 putative 2-ami 100.0 6.4E-33 1.4E-37 295.5 18.1 202 313-520 15-225 (353)
307 PRK11432 fbpC ferric transport 100.0 7.4E-33 1.6E-37 294.8 18.4 195 322-519 23-226 (351)
308 TIGR02314 ABC_MetN D-methionin 100.0 8.7E-33 1.9E-37 293.1 18.4 194 322-518 22-229 (343)
309 COG1118 CysA ABC-type sulfate/ 100.0 3.5E-33 7.7E-38 282.8 14.6 199 322-523 19-231 (345)
310 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7E-33 1.5E-37 278.7 16.5 201 312-519 14-227 (254)
311 cd03246 ABCC_Protease_Secretio 100.0 5E-33 1.1E-37 267.6 14.7 164 52-342 3-173 (173)
312 COG1120 FepC ABC-type cobalami 100.0 3.5E-33 7.7E-38 282.0 14.1 201 311-517 11-226 (258)
313 PLN03211 ABC transporter G-25; 100.0 1.1E-32 2.5E-37 314.9 19.7 205 52-349 71-292 (659)
314 TIGR03771 anch_rpt_ABC anchore 100.0 1E-32 2.2E-37 276.1 16.5 179 79-348 12-196 (223)
315 cd03247 ABCC_cytochrome_bd The 100.0 5.1E-33 1.1E-37 268.6 13.7 170 51-345 2-177 (178)
316 PRK10535 macrolide transporter 100.0 1.9E-32 4.1E-37 313.5 20.0 212 50-348 5-227 (648)
317 PRK13545 tagH teichoic acids e 100.0 2.1E-32 4.5E-37 300.0 18.1 200 50-348 22-227 (549)
318 cd03214 ABC_Iron-Siderophores_ 100.0 5E-33 1.1E-37 269.3 11.7 170 52-344 2-178 (180)
319 COG4988 CydD ABC-type transpor 100.0 1.6E-32 3.5E-37 298.9 17.0 202 52-351 323-541 (559)
320 PRK11174 cysteine/glutathione 100.0 1.1E-32 2.4E-37 312.4 16.3 204 50-348 350-567 (588)
321 COG1136 SalX ABC-type antimicr 100.0 3.5E-32 7.6E-37 269.9 17.5 187 318-508 18-220 (226)
322 PRK11153 metN DL-methionine tr 100.0 4E-32 8.7E-37 288.7 19.2 196 322-520 22-231 (343)
323 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.3E-32 4.9E-37 315.2 18.1 200 50-349 452-669 (686)
324 cd03288 ABCC_SUR2 The SUR doma 100.0 1.5E-32 3.2E-37 280.6 14.3 205 50-348 20-238 (257)
325 cd03261 ABC_Org_Solvent_Resist 100.0 4.5E-32 9.7E-37 273.0 17.4 195 322-519 17-226 (235)
326 PRK10938 putative molybdenum t 100.0 1.7E-32 3.7E-37 304.6 15.6 210 47-345 258-484 (490)
327 PRK09452 potA putrescine/sperm 100.0 4.6E-32 1E-36 290.8 18.2 196 322-520 31-235 (375)
328 PRK11607 potG putrescine trans 100.0 5.2E-32 1.1E-36 290.8 18.5 196 322-520 36-240 (377)
329 cd03237 ABC_RNaseL_inhibitor_d 100.0 4.2E-32 9.1E-37 275.9 16.8 175 66-340 7-192 (246)
330 PRK10851 sulfate/thiosulfate t 100.0 5.4E-32 1.2E-36 288.5 18.2 201 313-519 13-226 (353)
331 COG1137 YhbG ABC-type (unclass 100.0 5.8E-32 1.2E-36 259.1 16.4 205 312-519 14-228 (243)
332 PRK11160 cysteine/glutathione 100.0 1.9E-32 4.1E-37 309.8 15.4 202 50-348 339-557 (574)
333 COG4619 ABC-type uncharacteriz 100.0 6E-33 1.3E-37 259.1 9.3 196 59-342 9-212 (223)
334 PRK11000 maltose/maltodextrin 100.0 5.6E-32 1.2E-36 290.1 18.2 201 313-519 14-223 (369)
335 COG2274 SunT ABC-type bacterio 100.0 1.2E-32 2.6E-37 314.1 13.4 209 50-351 472-694 (709)
336 cd03217 ABC_FeS_Assembly ABC-t 100.0 3.5E-32 7.6E-37 267.8 15.0 175 52-347 3-188 (200)
337 COG1132 MdlB ABC-type multidru 100.0 3.6E-32 7.9E-37 307.0 16.9 208 50-351 329-550 (567)
338 cd03265 ABC_DrrA DrrA is the A 100.0 7.2E-32 1.6E-36 268.9 17.0 199 313-517 11-219 (220)
339 PRK10790 putative multidrug tr 100.0 4.9E-32 1.1E-36 307.4 17.8 201 50-349 341-559 (592)
340 cd03290 ABCC_SUR1_N The SUR do 100.0 7.6E-32 1.6E-36 268.4 16.8 192 52-341 3-218 (218)
341 cd03228 ABCC_MRP_Like The MRP 100.0 4.8E-32 1E-36 260.3 14.7 162 52-341 3-171 (171)
342 TIGR01842 type_I_sec_PrtD type 100.0 7.8E-32 1.7E-36 303.0 18.2 207 50-348 317-537 (544)
343 cd03250 ABCC_MRP_domain1 Domai 100.0 6.2E-32 1.3E-36 266.3 15.3 188 51-341 2-204 (204)
344 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.8E-32 1E-36 313.6 16.5 201 50-349 478-696 (710)
345 COG4172 ABC-type uncharacteriz 100.0 1.4E-31 3E-36 278.3 18.0 237 25-348 253-511 (534)
346 TIGR03375 type_I_sec_LssB type 100.0 3.1E-32 6.8E-37 314.4 13.8 203 50-349 464-684 (694)
347 cd03218 ABC_YhbG The ABC trans 100.0 2.7E-31 5.8E-36 266.6 18.5 200 313-518 11-221 (232)
348 COG4586 ABC-type uncharacteriz 100.0 2.7E-32 5.9E-37 272.0 11.0 215 66-365 37-258 (325)
349 COG2884 FtsE Predicted ATPase 100.0 1.1E-31 2.3E-36 255.5 14.5 189 322-513 19-220 (223)
350 PRK10070 glycine betaine trans 100.0 2E-31 4.4E-36 287.6 18.6 201 314-519 39-254 (400)
351 PRK11176 lipid transporter ATP 100.0 4.5E-32 9.7E-37 307.0 14.0 204 50-349 342-563 (582)
352 COG3638 ABC-type phosphate/pho 100.0 6.7E-32 1.5E-36 265.1 13.3 202 313-520 15-238 (258)
353 PRK13541 cytochrome c biogenes 100.0 9.2E-32 2E-36 263.6 14.3 184 51-334 3-192 (195)
354 cd03259 ABC_Carb_Solutes_like 100.0 2E-31 4.4E-36 264.2 16.9 194 313-512 11-213 (213)
355 TIGR03415 ABC_choXWV_ATP choli 100.0 2.2E-31 4.7E-36 285.6 18.3 202 313-519 34-254 (382)
356 PRK15064 ABC transporter ATP-b 100.0 1.4E-31 3.1E-36 300.0 17.3 192 48-347 318-519 (530)
357 PRK09536 btuD corrinoid ABC tr 100.0 3.2E-31 6.9E-36 286.2 19.0 200 312-517 13-226 (402)
358 TIGR01193 bacteriocin_ABC ABC- 100.0 4.7E-32 1E-36 313.6 13.4 202 50-349 474-693 (708)
359 cd03219 ABC_Mj1267_LivG_branch 100.0 3.8E-31 8.1E-36 266.2 18.2 195 322-519 17-232 (236)
360 PRK13637 cbiO cobalt transport 100.0 3E-31 6.6E-36 275.4 17.8 195 322-519 24-234 (287)
361 cd03258 ABC_MetN_methionine_tr 100.0 4.5E-31 9.7E-36 265.3 18.4 194 322-518 22-229 (233)
362 PRK13409 putative ATPase RIL; 100.0 3.1E-31 6.7E-36 299.7 19.1 194 46-347 337-536 (590)
363 cd03296 ABC_CysA_sulfate_impor 100.0 3.7E-31 8E-36 267.2 17.6 201 313-519 13-226 (239)
364 TIGR00958 3a01208 Conjugate Tr 100.0 9.5E-32 2.1E-36 311.0 15.1 203 50-350 479-699 (711)
365 TIGR00955 3a01204 The Eye Pigm 100.0 2.4E-31 5.1E-36 303.0 17.9 199 64-350 36-253 (617)
366 TIGR00956 3a01205 Pleiotropic 100.0 3.8E-31 8.2E-36 323.4 20.6 212 48-348 758-988 (1394)
367 PRK13651 cobalt transporter AT 100.0 2.4E-31 5.2E-36 278.4 16.2 195 322-519 24-254 (305)
368 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.2E-31 1.1E-35 271.1 18.3 202 312-519 34-250 (269)
369 PRK13657 cyclic beta-1,2-gluca 100.0 4E-31 8.7E-36 299.8 17.8 201 50-348 335-553 (588)
370 TIGR01192 chvA glucan exporter 100.0 4.1E-31 9E-36 299.5 17.8 206 50-349 335-554 (585)
371 cd03266 ABC_NatA_sodium_export 100.0 5.5E-31 1.2E-35 261.9 16.5 188 322-512 22-218 (218)
372 COG1117 PstB ABC-type phosphat 100.0 2.1E-31 4.5E-36 257.8 12.7 194 322-520 24-238 (253)
373 cd03256 ABC_PhnC_transporter A 100.0 1E-30 2.2E-35 263.7 18.4 199 315-519 14-234 (241)
374 KOG0058|consensus 100.0 1.8E-31 4E-36 295.7 13.8 208 49-348 465-686 (716)
375 cd03301 ABC_MalK_N The N-termi 100.0 7.5E-31 1.6E-35 260.0 16.7 194 313-512 11-213 (213)
376 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 6.4E-31 1.4E-35 296.1 18.2 192 47-343 320-520 (552)
377 TIGR00960 3a0501s02 Type II (G 100.0 5E-31 1.1E-35 262.0 15.3 184 322-508 20-216 (216)
378 cd03293 ABC_NrtD_SsuB_transpor 100.0 8E-31 1.7E-35 261.4 16.8 189 322-515 21-219 (220)
379 PRK10789 putative multidrug tr 100.0 5.8E-31 1.3E-35 297.4 17.6 202 50-348 314-533 (569)
380 TIGR02203 MsbA_lipidA lipid A 100.0 2.3E-31 5E-36 300.4 14.3 203 50-348 331-551 (571)
381 COG4987 CydC ABC-type transpor 100.0 7.3E-32 1.6E-36 289.9 9.6 204 49-349 336-557 (573)
382 cd03216 ABC_Carb_Monos_I This 100.0 4.9E-31 1.1E-35 251.7 14.3 153 51-344 2-162 (163)
383 PRK13634 cbiO cobalt transport 100.0 5.9E-31 1.3E-35 273.6 16.1 194 322-519 24-235 (290)
384 COG1124 DppF ABC-type dipeptid 100.0 4.4E-31 9.5E-36 260.9 14.1 194 322-520 24-232 (252)
385 cd03223 ABCD_peroxisomal_ALDP 100.0 7.2E-31 1.6E-35 251.2 15.2 156 52-341 3-164 (166)
386 PRK11819 putative ABC transpor 100.0 7.8E-31 1.7E-35 295.6 18.1 192 47-343 322-522 (556)
387 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.7E-30 3.6E-35 262.9 18.5 195 322-519 18-225 (242)
388 TIGR01846 type_I_sec_HlyB type 100.0 5.2E-31 1.1E-35 304.3 16.5 207 50-349 456-676 (694)
389 PRK15079 oligopeptide ABC tran 100.0 1.3E-30 2.8E-35 275.7 17.9 196 322-520 38-252 (331)
390 PRK09493 glnQ glutamine ABC tr 100.0 1.4E-30 3.1E-35 263.0 17.5 200 314-519 13-225 (240)
391 cd03263 ABC_subfamily_A The AB 100.0 1.2E-30 2.5E-35 259.9 16.6 196 315-517 15-219 (220)
392 PRK13647 cbiO cobalt transport 100.0 1.1E-30 2.4E-35 269.4 17.1 194 322-518 22-226 (274)
393 PRK13643 cbiO cobalt transport 100.0 1E-30 2.2E-35 271.5 16.6 194 322-519 23-233 (288)
394 PRK11264 putative amino-acid A 100.0 2.1E-30 4.5E-35 263.2 18.2 195 322-519 20-233 (250)
395 cd03269 ABC_putative_ATPase Th 100.0 1.3E-30 2.9E-35 257.8 16.4 187 322-512 17-210 (210)
396 cd03236 ABC_RNaseL_inhibitor_d 100.0 8.9E-31 1.9E-35 267.5 15.6 197 53-346 4-220 (255)
397 PRK15177 Vi polysaccharide exp 100.0 8.9E-31 1.9E-35 260.5 15.1 179 68-348 2-187 (213)
398 TIGR02857 CydD thiol reductant 100.0 6.9E-31 1.5E-35 294.2 16.0 191 50-337 321-529 (529)
399 cd03224 ABC_TM1139_LivF_branch 100.0 1.7E-30 3.7E-35 258.8 16.9 192 322-518 17-220 (222)
400 COG1101 PhnK ABC-type uncharac 100.0 4.9E-31 1.1E-35 255.3 12.0 210 51-345 3-230 (263)
401 COG4608 AppF ABC-type oligopep 100.0 5.6E-31 1.2E-35 265.1 12.9 180 49-349 4-195 (268)
402 COG4598 HisP ABC-type histidin 100.0 6.6E-31 1.4E-35 247.8 12.4 195 322-519 23-241 (256)
403 cd03291 ABCC_CFTR1 The CFTR su 100.0 9.3E-31 2E-35 271.0 14.7 204 31-348 18-242 (282)
404 TIGR02204 MsbA_rel ABC transpo 100.0 1.2E-30 2.5E-35 295.1 16.4 203 50-348 338-558 (576)
405 PRK11147 ABC transporter ATPas 100.0 1.4E-30 3E-35 297.8 17.1 195 46-345 316-519 (635)
406 PRK13641 cbiO cobalt transport 100.0 2E-30 4.4E-35 269.2 16.8 195 322-519 24-234 (287)
407 PRK13646 cbiO cobalt transport 100.0 1.9E-30 4.1E-35 269.2 16.5 194 322-519 24-235 (286)
408 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.4E-30 3.1E-35 258.9 14.9 183 322-508 21-218 (218)
409 PRK10895 lipopolysaccharide AB 100.0 2.8E-30 6.2E-35 260.9 17.3 200 313-518 14-225 (241)
410 PRK11831 putative ABC transpor 100.0 3.3E-30 7.2E-35 265.1 18.0 195 322-519 24-233 (269)
411 COG3840 ThiQ ABC-type thiamine 100.0 1.2E-30 2.6E-35 246.7 13.3 192 325-519 19-219 (231)
412 cd03260 ABC_PstB_phosphate_tra 100.0 1.7E-30 3.6E-35 260.1 15.2 196 313-516 11-226 (227)
413 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.8E-30 1E-34 258.6 18.6 201 314-521 13-223 (236)
414 cd03268 ABC_BcrA_bacitracin_re 100.0 2.1E-30 4.5E-35 256.1 15.6 190 313-512 11-208 (208)
415 PRK10619 histidine/lysine/argi 100.0 3.8E-30 8.3E-35 262.6 17.8 201 313-519 16-241 (257)
416 PRK13636 cbiO cobalt transport 100.0 2.9E-30 6.3E-35 267.5 16.8 200 314-519 18-231 (283)
417 TIGR02315 ABC_phnC phosphonate 100.0 2.7E-30 5.8E-35 261.1 16.1 193 322-517 19-233 (243)
418 TIGR02673 FtsE cell division A 100.0 3E-30 6.5E-35 255.9 16.0 183 322-507 19-214 (214)
419 PRK13650 cbiO cobalt transport 100.0 2.9E-30 6.2E-35 267.0 16.5 194 322-519 24-229 (279)
420 PRK10908 cell division protein 100.0 4.2E-30 9.1E-35 256.5 16.8 191 314-510 14-217 (222)
421 cd03264 ABC_drug_resistance_li 100.0 3.8E-30 8.2E-35 254.7 16.2 186 322-512 17-211 (211)
422 PRK10636 putative ABC transpor 100.0 2.2E-30 4.9E-35 295.9 16.7 193 46-347 309-511 (638)
423 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-30 5E-35 255.3 14.5 185 315-509 13-205 (205)
424 PRK13631 cbiO cobalt transport 100.0 4.1E-30 8.8E-35 270.8 17.0 194 322-519 43-265 (320)
425 PRK13652 cbiO cobalt transport 100.0 5E-30 1.1E-34 264.9 17.3 195 322-519 21-227 (277)
426 TIGR00972 3a0107s01c2 phosphat 100.0 7E-30 1.5E-34 259.1 17.9 193 322-519 18-232 (247)
427 TIGR03411 urea_trans_UrtD urea 100.0 9.4E-30 2E-34 257.1 18.4 193 322-518 19-230 (242)
428 PRK11124 artP arginine transpo 100.0 7E-30 1.5E-34 258.2 17.1 199 313-517 13-228 (242)
429 TIGR02868 CydC thiol reductant 100.0 1.1E-30 2.4E-35 292.5 12.4 178 50-324 335-529 (529)
430 cd03292 ABC_FtsE_transporter F 100.0 5.1E-30 1.1E-34 254.0 15.4 188 315-508 14-214 (214)
431 PRK13644 cbiO cobalt transport 100.0 5.6E-30 1.2E-34 264.2 16.2 194 322-519 19-224 (274)
432 PRK13638 cbiO cobalt transport 100.0 7.7E-30 1.7E-34 262.5 17.1 201 313-519 12-225 (271)
433 TIGR01187 potA spermidine/putr 100.0 1E-29 2.2E-34 268.4 18.4 149 371-519 41-190 (325)
434 PRK11308 dppF dipeptide transp 100.0 1E-29 2.2E-34 268.5 18.3 196 322-520 32-245 (327)
435 PRK11629 lolD lipoprotein tran 100.0 9.9E-30 2.1E-34 255.8 17.4 189 322-514 26-229 (233)
436 PRK13548 hmuV hemin importer A 100.0 9.9E-30 2.1E-34 260.0 17.5 200 314-519 14-230 (258)
437 PRK13635 cbiO cobalt transport 100.0 7.4E-30 1.6E-34 264.0 16.7 194 322-519 24-229 (279)
438 cd03225 ABC_cobalt_CbiO_domain 100.0 5.6E-30 1.2E-34 253.4 15.1 187 315-507 14-211 (211)
439 PLN03232 ABC transporter C fam 100.0 2.7E-30 5.9E-35 318.4 15.8 203 50-350 1235-1455(1495)
440 cd03300 ABC_PotA_N PotA is an 100.0 1.7E-29 3.7E-34 254.0 18.6 201 313-519 11-220 (232)
441 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.6E-30 7.8E-35 290.2 15.2 199 50-345 338-551 (555)
442 TIGR02142 modC_ABC molybdenum 100.0 8.1E-30 1.8E-34 272.2 17.0 193 323-520 15-222 (354)
443 PLN03130 ABC transporter C fam 100.0 2E-30 4.4E-35 320.2 13.9 204 50-351 1238-1459(1622)
444 PRK11144 modC molybdate transp 100.0 7.9E-30 1.7E-34 272.0 16.5 189 323-520 16-219 (352)
445 TIGR01184 ntrCD nitrate transp 100.0 8.3E-30 1.8E-34 256.2 15.7 191 322-517 2-202 (230)
446 PRK11022 dppD dipeptide transp 100.0 1.5E-29 3.3E-34 267.1 18.3 197 322-521 24-245 (326)
447 PRK10522 multidrug transporter 100.0 4.8E-30 1E-34 288.7 15.4 197 50-346 323-531 (547)
448 PRK11248 tauB taurine transpor 100.0 1.4E-29 3.1E-34 258.5 17.4 189 322-515 18-216 (255)
449 COG0411 LivG ABC-type branched 100.0 1.7E-29 3.7E-34 249.8 17.3 203 312-520 14-240 (250)
450 PRK11614 livF leucine/isoleuci 100.0 1.1E-29 2.3E-34 256.0 16.2 192 322-518 22-225 (237)
451 cd03262 ABC_HisP_GlnQ_permease 100.0 9.1E-30 2E-34 252.1 15.3 184 322-508 17-213 (213)
452 cd03297 ABC_ModC_molybdenum_tr 100.0 1.1E-29 2.4E-34 252.1 16.0 184 323-512 16-214 (214)
453 PRK13639 cbiO cobalt transport 100.0 1.8E-29 3.8E-34 260.6 18.0 195 322-519 19-226 (275)
454 TIGR02770 nickel_nikD nickel i 100.0 1.6E-29 3.6E-34 253.8 17.1 195 322-519 3-215 (230)
455 KOG0057|consensus 100.0 2.6E-30 5.6E-35 278.2 11.6 200 50-348 352-569 (591)
456 PRK11300 livG leucine/isoleuci 100.0 2.1E-29 4.6E-34 256.5 17.7 194 322-518 22-242 (255)
457 PRK14268 phosphate ABC transpo 100.0 2E-29 4.4E-34 257.5 17.6 193 322-519 29-242 (258)
458 cd03235 ABC_Metallic_Cations A 100.0 1.1E-29 2.4E-34 251.8 15.2 185 322-512 16-213 (213)
459 cd03299 ABC_ModC_like Archeal 100.0 1.9E-29 4.1E-34 254.3 17.0 195 322-519 16-219 (235)
460 PTZ00265 multidrug resistance 100.0 6.1E-30 1.3E-34 313.3 16.1 205 50-348 1166-1447(1466)
461 PLN03140 ABC transporter G fam 100.0 1.8E-29 3.9E-34 308.3 20.0 210 51-348 869-1105(1470)
462 PRK13649 cbiO cobalt transport 100.0 1.8E-29 3.9E-34 260.9 17.0 194 322-519 24-234 (280)
463 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.1E-29 2.4E-34 251.5 14.8 187 323-512 16-211 (211)
464 PRK13633 cobalt transporter AT 100.0 1.7E-29 3.7E-34 261.3 16.6 195 322-520 27-234 (280)
465 TIGR03873 F420-0_ABC_ATP propo 100.0 2.6E-29 5.7E-34 256.3 16.9 199 314-518 13-225 (256)
466 COG4161 ArtP ABC-type arginine 100.0 2E-29 4.4E-34 234.1 14.4 193 322-517 19-228 (242)
467 PRK10575 iron-hydroxamate tran 100.0 2.2E-29 4.8E-34 258.4 16.2 200 313-518 22-236 (265)
468 TIGR02211 LolD_lipo_ex lipopro 100.0 2.4E-29 5.2E-34 250.6 15.9 184 322-509 22-220 (221)
469 TIGR03740 galliderm_ABC gallid 100.0 3.3E-29 7.2E-34 250.2 17.0 187 322-516 17-210 (223)
470 TIGR03005 ectoine_ehuA ectoine 100.0 4E-29 8.6E-34 254.3 17.8 195 322-519 17-236 (252)
471 TIGR00968 3a0106s01 sulfate AB 100.0 3.9E-29 8.5E-34 252.3 17.6 201 313-519 11-220 (237)
472 PRK09473 oppD oligopeptide tra 100.0 2.7E-29 5.8E-34 265.6 17.1 198 322-522 33-254 (330)
473 cd03257 ABC_NikE_OppD_transpor 100.0 3.6E-29 7.8E-34 250.1 17.1 188 322-512 22-228 (228)
474 PRK10771 thiQ thiamine transpo 100.0 2.7E-29 5.9E-34 252.5 16.3 194 323-519 17-219 (232)
475 PRK11231 fecE iron-dicitrate t 100.0 2.5E-29 5.4E-34 256.3 16.0 199 314-518 14-226 (255)
476 TIGR03410 urea_trans_UrtE urea 100.0 3.6E-29 7.8E-34 251.0 16.8 191 322-518 17-220 (230)
477 PRK14273 phosphate ABC transpo 100.0 3.7E-29 8E-34 254.8 17.2 198 314-519 19-238 (254)
478 PRK14247 phosphate ABC transpo 100.0 4.5E-29 9.8E-34 253.5 17.7 194 322-519 20-234 (250)
479 TIGR01978 sufC FeS assembly AT 100.0 7.6E-29 1.6E-33 250.3 19.1 200 313-518 11-233 (243)
480 TIGR02769 nickel_nikE nickel i 100.0 5.4E-29 1.2E-33 255.5 18.1 195 322-519 28-240 (265)
481 TIGR01277 thiQ thiamine ABC tr 100.0 3.6E-29 7.7E-34 248.4 15.9 189 322-513 15-212 (213)
482 PRK14267 phosphate ABC transpo 100.0 6E-29 1.3E-33 253.0 17.9 199 314-519 16-237 (253)
483 PRK09984 phosphonate/organopho 100.0 3.8E-29 8.3E-34 256.0 16.5 198 314-517 16-240 (262)
484 PRK13640 cbiO cobalt transport 100.0 2.9E-29 6.2E-34 259.9 15.7 194 322-519 24-232 (282)
485 KOG0065|consensus 100.0 2.4E-29 5.2E-34 292.3 16.5 146 371-516 863-1018(1391)
486 PRK13632 cbiO cobalt transport 100.0 3.6E-29 7.8E-34 257.7 16.1 194 322-519 26-231 (271)
487 cd03267 ABC_NatA_like Similar 100.0 8E-29 1.7E-33 250.0 18.1 194 313-512 32-236 (236)
488 COG4618 ArpD ABC-type protease 100.0 3.2E-29 6.9E-34 267.5 15.8 207 51-349 336-556 (580)
489 KOG0055|consensus 100.0 1.5E-29 3.2E-34 294.4 14.4 209 50-350 988-1210(1228)
490 PRK10253 iron-enterobactin tra 100.0 5E-29 1.1E-33 255.7 16.7 200 313-518 18-232 (265)
491 PRK15093 antimicrobial peptide 100.0 6.6E-29 1.4E-33 262.7 17.8 196 322-520 24-249 (330)
492 TIGR00957 MRP_assoc_pro multi 100.0 2.4E-29 5.1E-34 310.5 16.7 204 50-351 1285-1506(1522)
493 COG0444 DppD ABC-type dipeptid 100.0 4.2E-29 9.2E-34 256.5 15.7 207 320-526 20-250 (316)
494 PRK13645 cbiO cobalt transport 100.0 4.6E-29 1E-33 259.1 16.0 195 322-519 28-240 (289)
495 PRK10584 putative ABC transpor 100.0 7.2E-29 1.6E-33 248.5 16.8 186 322-511 27-227 (228)
496 PTZ00243 ABC transporter; Prov 100.0 2.1E-29 4.5E-34 310.7 15.6 204 50-350 1309-1530(1560)
497 PRK14242 phosphate transporter 100.0 7.5E-29 1.6E-33 252.3 17.0 193 322-519 23-237 (253)
498 PLN03073 ABC transporter F fam 100.0 8.1E-29 1.8E-33 285.1 19.2 190 46-343 505-703 (718)
499 PRK11247 ssuB aliphatic sulfon 100.0 5.5E-29 1.2E-33 254.6 15.2 188 314-515 24-219 (257)
500 PRK14245 phosphate ABC transpo 100.0 1.2E-28 2.5E-33 250.6 17.4 193 322-519 20-234 (250)
No 1
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.4e-65 Score=568.77 Aligned_cols=379 Identities=19% Similarity=0.301 Sum_probs=305.0
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
++.+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 4 ~i~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~NGs--GKSTL------l~~l~G~~~p~~G~i~~~g~~~~~~ 71 (501)
T PRK10762 4 LLQLKGIDKAFPG----VKALSGAALNVYPGRVMALVGENGA--GKSTM------MKVLTGIYTRDAGSILYLGKEVTFN 71 (501)
T ss_pred eEEEeeeEEEeCC----eEEeeeeeEEEcCCeEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEECCCC
Confidence 3568999999864 4599999999988 999999 56665 6799999999999999999987532
Q ss_pred -h-HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc---C-CChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhh
Q psy7365 123 -M-TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK---Q-VPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 123 -~-~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~---~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
. ...++.+||+||++.+|+.+||+||+.|+...+ + .+..+.++++.++++.+||.+..++++++||||||||++
T Consensus 72 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ 151 (501)
T PRK10762 72 GPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVGELSIGEQQMVE 151 (501)
T ss_pred CHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHH
Confidence 2 223567999999999999999999999875432 2 334455667889999999999999999999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+|+|| +.+
T Consensus 152 la~al--------------------------------------~~~---------------------------------- 159 (501)
T PRK10762 152 IAKVL--------------------------------------SFE---------------------------------- 159 (501)
T ss_pred HHHHH--------------------------------------hcC----------------------------------
Confidence 65432 233
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc-----
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL----- 351 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL----- 351 (601)
|++|||||||+|||+.++..++++|+++. ..|+|||++|||++++..+||++++|.+|+++..++...+
T Consensus 160 -p~lllLDEPt~~LD~~~~~~l~~~l~~l~-----~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 233 (501)
T PRK10762 160 -SKVIIMDEPTDALTDTETESLFRVIRELK-----SQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTEDSL 233 (501)
T ss_pred -CCEEEEeCCcCCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHHHH
Confidence 58999999999999999999999999883 3489999999999999999999999999998654322100
Q ss_pred ---------c-----------ccc------------------------------c-------------------cccccc
Q psy7365 352 ---------K-----------NSF------------------------------A-------------------RGYYLS 362 (601)
Q Consensus 352 ---------k-----------~~~------------------------------g-------------------~g~~ig 362 (601)
. ... | ..++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g 313 (501)
T PRK10762 234 IEMMVGRKLEDQYPRLDKAPGEVRLKVDNLSGPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDG 313 (501)
T ss_pred HHHhcCCCccccccccccCCCCcEEEEeCcccCCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECC
Confidence 0 000 0 000000
Q ss_pred cccCCc----ccccccccCCCCc---ccCCCCCHHHHHHHhHH--hc---C-CChhHHHHHHHHHHHHcCCC-ccccccc
Q psy7365 363 LDMKSA----PQKSYIGYCPQFD---ALNDRLTPREHLEFYSR--VR---N-LPSVLLNTIVNESLNKFALG-HYSDREV 428 (601)
Q Consensus 363 ld~~~~----~~~~~ig~v~Q~~---~l~~~lTv~E~L~~~~~--~~---g-~~~~~~~~~~~~lLe~~~L~-~~~~~~~ 428 (601)
.++... ..++.+||+||++ .+++.+|+.||+.+... .. + ....+.++.++++++.+++. +..++++
T Consensus 314 ~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 393 (501)
T PRK10762 314 HEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI 393 (501)
T ss_pred EECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch
Confidence 011100 1134699999996 57888999999986421 11 1 22233445688999999995 6789999
Q ss_pred CcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEE
Q psy7365 429 RTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 508 (601)
Q Consensus 429 ~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~i 508 (601)
.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||++++..+|||+++|++|++
T Consensus 394 ~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i 473 (501)
T PRK10762 394 GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRI 473 (501)
T ss_pred hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999999987899999999999999999999999999999
Q ss_pred EEecCHHHH
Q psy7365 509 TCLGSATHL 517 (601)
Q Consensus 509 v~~G~~~~L 517 (601)
+..|+++++
T Consensus 474 ~~~~~~~~~ 482 (501)
T PRK10762 474 SGEFTREQA 482 (501)
T ss_pred EEEeccccC
Confidence 999887654
No 2
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-65 Score=578.61 Aligned_cols=388 Identities=22% Similarity=0.259 Sum_probs=312.8
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
.++..+++|++.|+......++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGs--GKSTL------l~~l~Gll~p~~G~i~~~g~~~~ 81 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGS--GKSVT------ALALMRLLEQAGGLVQCDKMLLR 81 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCC--hHHHH------HHHHHcCCCCCCeEEEECCEEec
Confidence 34567999999996544456799999999988 999999 56654 57999999999999999986441
Q ss_pred ----------C-ch---HHh-cccEEEEccCC--CCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCCc---c
Q psy7365 121 ----------T-DM---TTI-RRSLGVCPQYN--ALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIPH---K 179 (601)
Q Consensus 121 ----------~-~~---~~~-~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~---~ 179 (601)
. .. ... ++.||||||+| .+++.+||.||+.++.... +.+..+.++++.++++.+||.+ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~ 161 (623)
T PRK10261 82 RRSRQVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTI 161 (623)
T ss_pred cccccccccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhH
Confidence 1 11 122 34799999998 6888999999999987653 6677777788999999999964 5
Q ss_pred cCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhh
Q psy7365 180 RTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKA 259 (601)
Q Consensus 180 ~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 259 (601)
.++++.+|||||||||+||+|| +.+
T Consensus 162 ~~~~~~~LSgGq~QRv~iA~AL--------------------------------------~~~----------------- 186 (623)
T PRK10261 162 LSRYPHQLSGGMRQRVMIAMAL--------------------------------------SCR----------------- 186 (623)
T ss_pred HhCCCccCCHHHHHHHHHHHHH--------------------------------------hCC-----------------
Confidence 7999999999999999865433 233
Q ss_pred cchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecC
Q psy7365 260 GTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAA 339 (601)
Q Consensus 260 ~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~ 339 (601)
|++|||||||++||+.++..++++|+++. +..|+|||++|||++++..+||||++|.+
T Consensus 187 ------------------P~lLllDEPt~~LD~~~~~~l~~ll~~l~----~~~g~tvi~itHdl~~~~~~adri~vl~~ 244 (623)
T PRK10261 187 ------------------PAVLIADEPTTALDVTIQAQILQLIKVLQ----KEMSMGVIFITHDMGVVAEIADRVLVMYQ 244 (623)
T ss_pred ------------------CCEEEEeCCCCccCHHHHHHHHHHHHHHH----HhcCCEEEEEcCCHHHHHHhCCEEEEeeC
Confidence 58999999999999999999999999983 23489999999999999999999999999
Q ss_pred CccccccCccc----------------------------------------------------------cc-ccccccc-
Q psy7365 340 GKLQCCGSSVF----------------------------------------------------------LK-NSFARGY- 359 (601)
Q Consensus 340 GkIv~~G~~~l----------------------------------------------------------Lk-~~~g~g~- 359 (601)
|+++..|++.. +. ......|
T Consensus 245 G~i~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~y~ 324 (623)
T PRK10261 245 GEAVETGSVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQEPPIEQDTVVDGEPILQVRNLVTRFP 324 (623)
T ss_pred CeecccCCHHHhhcCCCChhhhhhhhccCcccccccccCCccccccccccccccCcccccccccCCCceEEEeeeEEEEc
Confidence 99865432100 00 0000000
Q ss_pred --------------c---cccc-----------------------------------------cCCc------ccccccc
Q psy7365 360 --------------Y---LSLD-----------------------------------------MKSA------PQKSYIG 375 (601)
Q Consensus 360 --------------~---igld-----------------------------------------~~~~------~~~~~ig 375 (601)
. ++++ +... ..+++|+
T Consensus 325 ~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~ 404 (623)
T PRK10261 325 LRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQ 404 (623)
T ss_pred CCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeE
Confidence 0 0000 0000 0134699
Q ss_pred cCCCCc--ccCCCCCHHHHHHHhHHhcCC-ChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCE
Q psy7365 376 YCPQFD--ALNDRLTPREHLEFYSRVRNL-PSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPL 451 (601)
Q Consensus 376 ~v~Q~~--~l~~~lTv~E~L~~~~~~~g~-~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~l 451 (601)
|+||++ .+++.+||.+++.+....++. ...+..+++.++|+.++|. +..++++.+|||||||||+||+||+.+|++
T Consensus 405 ~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~l 484 (623)
T PRK10261 405 FIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKV 484 (623)
T ss_pred EEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 999997 588899999999876554443 2334556788999999996 678999999999999999999999999999
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 452 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 452 LlLDEPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||||||+|||+.++..++++|++++++ |.|||++|||++++..+||||++|++|+++..|+++++..
T Consensus 485 lllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~ 553 (623)
T PRK10261 485 IIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFE 553 (623)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999765 8999999999999999999999999999999999999864
No 3
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-65 Score=567.58 Aligned_cols=379 Identities=21% Similarity=0.307 Sum_probs=305.1
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC--CeeEEEEccccCC
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV--SSGTAKIYDHDIR 120 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~--~~G~v~~~g~~~~ 120 (601)
+..++||++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.++.
T Consensus 5 ~l~~~nl~~~~~~----~~il~~isl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~~~G~i~~~g~~~~ 72 (506)
T PRK13549 5 LLEMKNITKTFGG----VKALDNVSLKVRAGEIVSLCGENGA--GKSTL------MKVLSGVYPHGTYEGEIIFEGEELQ 72 (506)
T ss_pred eEEEeeeEEEeCC----eEeecceeEEEeCCeEEEEECCCCC--CHHHH------HHHHhCCCCCCCCCeEEEECCEECC
Confidence 4668999999863 4599999999988 999999 56665 6799999996 8999999999885
Q ss_pred Cc-hH-HhcccEEEEccCCCCCCCCCHHHHHHHhHhhc--C-CChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhh
Q psy7365 121 TD-MT-TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK--Q-VPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 121 ~~-~~-~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~--~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~ 195 (601)
.. .. ..++.+||+||++.+|+.+||.||+.|+.... + .+.++...++.++++.+|+.+..++++++||||||||+
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv 152 (506)
T PRK13549 73 ASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVGNLGLGQQQLV 152 (506)
T ss_pred CCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHH
Confidence 42 22 24567999999999999999999999876543 2 34445567789999999999889999999999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++|||| +.+
T Consensus 153 ~la~al--------------------------------------~~~--------------------------------- 161 (506)
T PRK13549 153 EIAKAL--------------------------------------NKQ--------------------------------- 161 (506)
T ss_pred HHHHHH--------------------------------------hcC---------------------------------
Confidence 854432 233
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc-----
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF----- 350 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l----- 350 (601)
|++|||||||+|||+.++..++++|.++. .+|+|||++|||++++..+||++++|.+|+++..++...
T Consensus 162 --p~lllLDEPt~~LD~~~~~~l~~~l~~l~-----~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 234 (506)
T PRK13549 162 --ARLLILDEPTASLTESETAVLLDIIRDLK-----AHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTEDD 234 (506)
T ss_pred --CCEEEEeCCCCCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHHH
Confidence 58999999999999999999999999873 358999999999999999999999999999865432110
Q ss_pred -------------------------c--cc---cc---ccccc-------------------------------ccc---
Q psy7365 351 -------------------------L--KN---SF---ARGYY-------------------------------LSL--- 363 (601)
Q Consensus 351 -------------------------L--k~---~~---g~g~~-------------------------------igl--- 363 (601)
+ ++ .+ +.... .|.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~ 314 (506)
T PRK13549 235 IITMMVGRELTALYPREPHTIGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG 314 (506)
T ss_pred HHHHhhCcCccccccccccCCCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC
Confidence 0 00 00 00000 000
Q ss_pred -----------ccCCc----ccccccccCCCCc---ccCCCCCHHHHHHHhH--HhcC---CChhHHHHHHHHHHHHcCC
Q psy7365 364 -----------DMKSA----PQKSYIGYCPQFD---ALNDRLTPREHLEFYS--RVRN---LPSVLLNTIVNESLNKFAL 420 (601)
Q Consensus 364 -----------d~~~~----~~~~~ig~v~Q~~---~l~~~lTv~E~L~~~~--~~~g---~~~~~~~~~~~~lLe~~~L 420 (601)
++... ..++.+||+||++ .+++.+|+.||+.+.. .+.+ ......++++.++++.+++
T Consensus 315 ~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 394 (506)
T PRK13549 315 RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKV 394 (506)
T ss_pred CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCc
Confidence 00000 0124599999985 4788899999998643 1221 1223344678899999999
Q ss_pred C-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCE
Q psy7365 421 G-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTK 499 (601)
Q Consensus 421 ~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~dr 499 (601)
. +..++++.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++|+|||++|||+++++.+|||
T Consensus 395 ~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~ 474 (506)
T PRK13549 395 KTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDR 474 (506)
T ss_pred cCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCE
Confidence 6 578999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred EEEEeCCEEEEecCHHHH
Q psy7365 500 LTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 500 v~iL~~G~iv~~G~~~~L 517 (601)
+++|++|++++.|+++++
T Consensus 475 v~~l~~G~i~~~~~~~~~ 492 (506)
T PRK13549 475 VLVMHEGKLKGDLINHNL 492 (506)
T ss_pred EEEEECCEEEEEeccccC
Confidence 999999999999987765
No 4
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.7e-65 Score=552.32 Aligned_cols=391 Identities=23% Similarity=0.314 Sum_probs=321.2
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC----eeEEEEcccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS----SGTAKIYDHD 118 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~----~G~v~~~g~~ 118 (601)
+..++||++.|...+....+++|+||++.+ +|-||| ||||++ +.|+|++|+. +|+|.++|.+
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGs-------GKSt~a-~~i~gll~~~~~~~~G~I~~~g~d 76 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGS-------GKSTLA-LALMGLLPEGGRITSGEVILDGRD 76 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCC-------CHHHHH-HHHhccCCCCCcccceEEEECCcc
Confidence 567999999998887777899999999998 999999 455556 4899999986 8999999998
Q ss_pred CCCc----hHH-hcccEEEEccCC--CCCCCCCHHHHHHHhHhhcC-CChHHHHHHHHHHHHHcCCCcccCC--ccccCC
Q psy7365 119 IRTD----MTT-IRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQ-VPKDLAQLEISNMIGDLGIPHKRTS--LANTLS 188 (601)
Q Consensus 119 ~~~~----~~~-~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~~~--~~~~LS 188 (601)
+..- ... ..+.|+|+||+| .+-|-+|+.+++.=....++ .+++++++++.++|+.+||++...+ +|++||
T Consensus 77 l~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLS 156 (539)
T COG1123 77 LLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLS 156 (539)
T ss_pred hhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCCcccC
Confidence 7531 222 346899999998 46777999999986666554 5588899999999999999987655 999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+.||+| ++++
T Consensus 157 GG~rQRv~iAmA--------------------------------------La~~-------------------------- 172 (539)
T COG1123 157 GGMRQRVMIAMA--------------------------------------LALK-------------------------- 172 (539)
T ss_pred chHHHHHHHHHH--------------------------------------HhCC--------------------------
Confidence 999999874332 3333
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++||+||||++||+..+.++.++|+++. ++.|.++|++|||+..+.++|||+++|.+|+++..|.+
T Consensus 173 ---------P~LLIaDEPTTaLDvt~q~qIL~llk~l~----~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~ 239 (539)
T COG1123 173 ---------PKLLIADEPTTALDVTTQAQILDLLKDLQ----RELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPT 239 (539)
T ss_pred ---------CCEEEECCCccccCHHHHHHHHHHHHHHH----HHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCH
Confidence 58999999999999999999999999995 35799999999999999999999999999999887642
Q ss_pred ccc-----------------------------------------c---cccc-------c--c-----------------
Q psy7365 349 VFL-----------------------------------------K---NSFA-------R--G----------------- 358 (601)
Q Consensus 349 ~lL-----------------------------------------k---~~~g-------~--g----------------- 358 (601)
..+ + ..+. + +
T Consensus 240 ~~i~~~p~hpYT~~Ll~a~p~~~~~~~~~~~~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~ 319 (539)
T COG1123 240 EEILSNPQHPYTRGLLAAVPRLGDEKIIRLPRRGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGET 319 (539)
T ss_pred HHHHhccCCcccHHHHhhCCCcccccccccccccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCE
Confidence 100 0 0000 0 0
Q ss_pred -----------------------------cccccc--cC---CcccccccccCCCCc--ccCCCCCHHHHHHHhHHhcCC
Q psy7365 359 -----------------------------YYLSLD--MK---SAPQKSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNL 402 (601)
Q Consensus 359 -----------------------------~~igld--~~---~~~~~~~ig~v~Q~~--~l~~~lTv~E~L~~~~~~~g~ 402 (601)
.+.+.+ .. ....++++-++||+| ++.|.+||.+++.-...+++.
T Consensus 320 lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~ 399 (539)
T COG1123 320 LGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG 399 (539)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc
Confidence 000000 00 011245788899987 589999999999887766543
Q ss_pred C-hhHHHHHHHHHHHHcCCCc-ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhC-
Q psy7365 403 P-SVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSE- 479 (601)
Q Consensus 403 ~-~~~~~~~~~~lLe~~~L~~-~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~- 479 (601)
. ..+.++++.++++.++|.. +.+++|.+||||||||++|||||+.+|++|++|||||.||+..+..+.++|+++.++
T Consensus 400 ~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~ 479 (539)
T COG1123 400 GSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEEL 479 (539)
T ss_pred cchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHh
Confidence 2 3455667999999999985 799999999999999999999999999999999999999999999999999999876
Q ss_pred CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCc
Q psy7365 480 GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQG 524 (601)
Q Consensus 480 G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~ 524 (601)
|.|.+++|||+..++.+||||++|++|+|+..|+.+.+.+...+.
T Consensus 480 g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~ 524 (539)
T COG1123 480 GLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHP 524 (539)
T ss_pred CCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCCh
Confidence 999999999999999999999999999999999998887654443
No 5
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-64 Score=563.81 Aligned_cols=377 Identities=20% Similarity=0.323 Sum_probs=301.5
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
++..++||++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~liG~nGs--GKSTL------l~~i~Gl~~p~~G~i~~~g~~i~~ 71 (510)
T PRK09700 4 PYISMAGIGKSFGP----VHALKSVNLTVYPGEIHALLGENGA--GKSTL------MKVLSGIHEPTKGTITINNINYNK 71 (510)
T ss_pred ceEEEeeeEEEcCC----eEEeeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHcCCcCCCccEEEECCEECCC
Confidence 34668999999863 4599999999988 999999 56665 579999999999999999998854
Q ss_pred c-hH-HhcccEEEEccCCCCCCCCCHHHHHHHhHh----hcCC---ChHHHHHHHHHHHHHcCCCcccCCccccCChHHH
Q psy7365 122 D-MT-TIRRSLGVCPQYNALFDKLTVEEHMWFYSQ----LKQV---PKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQ 192 (601)
Q Consensus 122 ~-~~-~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~----~~~~---~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~ 192 (601)
. .. ..++.+||+||++.+|+.+||.||+.++.. .++. +..+.+.++.++++.+||.+..++++.+||||||
T Consensus 72 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~ 151 (510)
T PRK09700 72 LDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHK 151 (510)
T ss_pred CCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHH
Confidence 2 22 234579999999999999999999987543 1232 2344567789999999999999999999999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++||+|+ .+
T Consensus 152 qrv~ia~al~--------------------------------------~~------------------------------ 163 (510)
T PRK09700 152 QMLEIAKTLM--------------------------------------LD------------------------------ 163 (510)
T ss_pred HHHHHHHHHh--------------------------------------cC------------------------------
Confidence 9998654332 22
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc--
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF-- 350 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l-- 350 (601)
|++|||||||+|||+.++..++++|+++. .+|+|||++|||++++..+||++++|.+|+++..+.+..
T Consensus 164 -----p~lllLDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 233 (510)
T PRK09700 164 -----AKVIIMDEPTSSLTNKEVDYLFLIMNQLR-----KEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVS 233 (510)
T ss_pred -----CCEEEEeCCCCCCCHHHHHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCC
Confidence 58999999999999999999999999983 358999999999999999999999999999865442210
Q ss_pred --------------------------------c--cc---ccc-----------cc------------------------
Q psy7365 351 --------------------------------L--KN---SFA-----------RG------------------------ 358 (601)
Q Consensus 351 --------------------------------L--k~---~~g-----------~g------------------------ 358 (601)
+ ++ ... .|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~ 313 (510)
T PRK09700 234 NDDIVRLMVGRELQNRFNAMKENVSNLAHETVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVD 313 (510)
T ss_pred HHHHHHHhcCCCccccccccccccccCCCCcEEEEeCccccCCCcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCC
Confidence 0 00 000 00
Q ss_pred -------cccccccCCc----ccccccccCCCC---cccCCCCCHHHHHHHhHHhc--------CC-ChhHHHHHHHHHH
Q psy7365 359 -------YYLSLDMKSA----PQKSYIGYCPQF---DALNDRLTPREHLEFYSRVR--------NL-PSVLLNTIVNESL 415 (601)
Q Consensus 359 -------~~igld~~~~----~~~~~ig~v~Q~---~~l~~~lTv~E~L~~~~~~~--------g~-~~~~~~~~~~~lL 415 (601)
++.+.++... ..++++||+||+ ..+++.+|+.||+.+....+ +. .....++++.+++
T Consensus 314 ~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 393 (510)
T PRK09700 314 KRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQR 393 (510)
T ss_pred cCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHH
Confidence 0000001000 013469999998 46888999999998643211 11 1223345678999
Q ss_pred HHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHH
Q psy7365 416 NKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECE 494 (601)
Q Consensus 416 e~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~ 494 (601)
+.+++. +..++++.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||++++.
T Consensus 394 ~~~~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~ 473 (510)
T PRK09700 394 ELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEII 473 (510)
T ss_pred HhcCCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 999997 7889999999999999999999999999999999999999999999999999999878999999999999999
Q ss_pred hhCCEEEEEeCCEEEEecCH
Q psy7365 495 ALCTKLTIMVNGQFTCLGSA 514 (601)
Q Consensus 495 ~l~drv~iL~~G~iv~~G~~ 514 (601)
.+|||+++|++|+++..++.
T Consensus 474 ~~~d~i~~l~~G~i~~~~~~ 493 (510)
T PRK09700 474 TVCDRIAVFCEGRLTQILTN 493 (510)
T ss_pred hhCCEEEEEECCEEEEEecC
Confidence 99999999999999887754
No 6
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-64 Score=561.08 Aligned_cols=379 Identities=19% Similarity=0.300 Sum_probs=304.4
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 4 ~l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~p~~G~I~~~g~~i~~~ 71 (501)
T PRK11288 4 YLSFDGIGKTFPG----VKALDDISFDCRAGQVHALMGENGA--GKSTL------LKILSGNYQPDAGSILIDGQEMRFA 71 (501)
T ss_pred eEEEeeeEEEECC----EEEEeeeeEEEeCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCCEEEECCEECCCC
Confidence 4568999999864 3599999999988 999999 56665 679999999999999999998753
Q ss_pred -chHHhcccEEEEccCCCCCCCCCHHHHHHHhHh--hcC-CChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 122 -DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ--LKQ-VPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 122 -~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~--~~~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
.....++.+||+||++.+|+.+||.||+.++.. ..+ .+..+.++++.++++.+|+.+..++++.+||||||||+++
T Consensus 72 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~l 151 (501)
T PRK11288 72 STTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEI 151 (501)
T ss_pred CHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHH
Confidence 223456789999999999999999999998642 223 3445566788999999999988899999999999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
||+| +.+
T Consensus 152 aral--------------------------------------~~~----------------------------------- 158 (501)
T PRK11288 152 AKAL--------------------------------------ARN----------------------------------- 158 (501)
T ss_pred HHHH--------------------------------------HhC-----------------------------------
Confidence 5432 222
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc-c------
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV-F------ 350 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~-l------ 350 (601)
|+++||||||+|||+.++..++++|+++. .+|+|||++||+++++..+||++++|.+|+++..+... .
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~ 233 (501)
T PRK11288 159 ARVIAFDEPTSSLSAREIEQLFRVIRELR-----AEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVDRDQL 233 (501)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCCHHHH
Confidence 58999999999999999999999999872 35899999999999999999999999999986433210 0
Q ss_pred c----c----------c-cc-----------------------------------c-------------------ccccc
Q psy7365 351 L----K----------N-SF-----------------------------------A-------------------RGYYL 361 (601)
Q Consensus 351 L----k----------~-~~-----------------------------------g-------------------~g~~i 361 (601)
. . + .. | ..++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~ 313 (501)
T PRK11288 234 VQAMVGREIGDIYGYRPRPLGEVRLRLDGLKGPGLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLD 313 (501)
T ss_pred HHHhcCCCccccccccccCCCCcEEEEeccccCCcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEEC
Confidence 0 0 0 00 0 00000
Q ss_pred ccccCCc----ccccccccCCCCc---ccCCCCCHHHHHHHhHHhc----C--CChhHHHHHHHHHHHHcCCC-cccccc
Q psy7365 362 SLDMKSA----PQKSYIGYCPQFD---ALNDRLTPREHLEFYSRVR----N--LPSVLLNTIVNESLNKFALG-HYSDRE 427 (601)
Q Consensus 362 gld~~~~----~~~~~ig~v~Q~~---~l~~~lTv~E~L~~~~~~~----g--~~~~~~~~~~~~lLe~~~L~-~~~~~~ 427 (601)
+.++... ..++.++|+||++ .+++.+|+.||+.+....+ + ......++.+.++++.+++. +..+++
T Consensus 314 g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 393 (501)
T PRK11288 314 GKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQL 393 (501)
T ss_pred CEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCc
Confidence 0011000 0135699999996 4888999999997643211 1 12223345688999999994 678999
Q ss_pred cCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCE
Q psy7365 428 VRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 507 (601)
Q Consensus 428 ~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~ 507 (601)
+.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||+++++.+|||+++|++|+
T Consensus 394 ~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~ 473 (501)
T PRK11288 394 IMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGR 473 (501)
T ss_pred cccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EEEecCHHHH
Q psy7365 508 FTCLGSATHL 517 (601)
Q Consensus 508 iv~~G~~~~L 517 (601)
+++.|+++++
T Consensus 474 i~~~~~~~~~ 483 (501)
T PRK11288 474 IAGELAREQA 483 (501)
T ss_pred EEEEEccccC
Confidence 9999987653
No 7
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.9e-64 Score=563.51 Aligned_cols=386 Identities=22% Similarity=0.306 Sum_probs=307.4
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~ 117 (601)
+..+++|++.|+..+....+++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGs--GKSTL------l~~i~G~~~~~~~~~~~G~i~~~g~ 76 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGS--GKSVT------ALSILRLLPSPPVVYPSGDIRFHGE 76 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCC--cHHHH------HHHHhcCCCCCcCCccceEEEECCE
Confidence 466899999986322235799999999988 999999 56665 5799999987 7999999999
Q ss_pred cCCCc-hH---Hhc-ccEEEEccCCC--CCCCCCHHHHHHHhHhh-cCCChHHHHHHHHHHHHHcCCCc---ccCCcccc
Q psy7365 118 DIRTD-MT---TIR-RSLGVCPQYNA--LFDKLTVEEHMWFYSQL-KQVPKDLAQLEISNMIGDLGIPH---KRTSLANT 186 (601)
Q Consensus 118 ~~~~~-~~---~~~-~~ig~v~Q~~~--~~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~gl~~---~~~~~~~~ 186 (601)
++... .. ..+ +.+||+||++. +++.+++.+|+.+.... .+.+..+.+.++.++++.+||.+ ..++++.+
T Consensus 77 ~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~ 156 (529)
T PRK15134 77 SLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQ 156 (529)
T ss_pred ecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcc
Confidence 87532 11 223 57999999985 67778999999876443 35666666788999999999986 35899999
Q ss_pred CChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHH
Q psy7365 187 LSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVA 266 (601)
Q Consensus 187 LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a 266 (601)
|||||||||++|||| +.+
T Consensus 157 LSgGe~qrv~iAraL--------------------------------------~~~------------------------ 174 (529)
T PRK15134 157 LSGGERQRVMIAMAL--------------------------------------LTR------------------------ 174 (529)
T ss_pred cCHHHHHHHHHHHHH--------------------------------------hcC------------------------
Confidence 999999999865432 233
Q ss_pred HHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 267 VTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 267 ~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|++|||||||++||+.++..++++|+++. +..|+|||++|||++++..+|||+++|.+|+++..+
T Consensus 175 -----------p~llllDEPt~~LD~~~~~~l~~~l~~l~----~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g 239 (529)
T PRK15134 175 -----------PELLIADEPTTALDVSVQAQILQLLRELQ----QELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQN 239 (529)
T ss_pred -----------CCEEEEcCCCCccCHHHHHHHHHHHHHHH----HhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeC
Confidence 58999999999999999999999999983 224899999999999999999999999999986543
Q ss_pred Cccc--------------------------------c--cc---ccc-----------cccc----------------c-
Q psy7365 347 SSVF--------------------------------L--KN---SFA-----------RGYY----------------L- 361 (601)
Q Consensus 347 ~~~l--------------------------------L--k~---~~g-----------~g~~----------------i- 361 (601)
++.. + ++ .++ .... +
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G 319 (529)
T PRK15134 240 RAATLFSAPTHPYTQKLLNSEPSGDPVPLPEPASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVG 319 (529)
T ss_pred CHHHHhhCCCCHHHHHHHHhCccccccccCCCCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEEC
Confidence 2100 0 00 000 0000 0
Q ss_pred --------------------------ccccCCcc------cccccccCCCCc--ccCCCCCHHHHHHHhHHhcC--CChh
Q psy7365 362 --------------------------SLDMKSAP------QKSYIGYCPQFD--ALNDRLTPREHLEFYSRVRN--LPSV 405 (601)
Q Consensus 362 --------------------------gld~~~~~------~~~~ig~v~Q~~--~l~~~lTv~E~L~~~~~~~g--~~~~ 405 (601)
+.++.... .++++||+||++ .+++.+||.||+.+....++ .+..
T Consensus 320 ~nGsGKSTLlk~l~Gl~~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~ 399 (529)
T PRK15134 320 ESGSGKSTTGLALLRLINSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAA 399 (529)
T ss_pred CCCCCHHHHHHHHhCcCCCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChH
Confidence 00000000 134699999997 47888999999987644332 3334
Q ss_pred HHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhC-CcEE
Q psy7365 406 LLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCV 483 (601)
Q Consensus 406 ~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~-G~tV 483 (601)
+.++++.++++.++|. +..++++.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++ |+||
T Consensus 400 ~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tv 479 (529)
T PRK15134 400 QREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAY 479 (529)
T ss_pred HHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEE
Confidence 4456788999999997 5789999999999999999999999999999999999999999999999999999865 8999
Q ss_pred EEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 484 ILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 484 llsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|++|||++++..+|||+++|++|++++.|+++++.+
T Consensus 480 i~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 515 (529)
T PRK15134 480 LFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFA 515 (529)
T ss_pred EEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhc
Confidence 999999999999999999999999999999998854
No 8
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6.8e-64 Score=559.44 Aligned_cols=380 Identities=22% Similarity=0.307 Sum_probs=305.4
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCC--CCCeeEEEEc-------
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGML--PVSSGTAKIY------- 115 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~--~~~~G~v~~~------- 115 (601)
.++||++.|++ ..+++|+||++.+ +||||| ||||| .++|+|++ +|++|+|.++
T Consensus 2 ~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~iiG~nGs--GKSTL------l~~l~Gl~~~~p~~G~i~~~~~~~~~~ 69 (520)
T TIGR03269 2 EVKNLTKKFDG----KEVLKNISFTIEEGEVLGILGRSGA--GKSVL------MHVLRGMDQYEPTSGRIIYHVALCEKC 69 (520)
T ss_pred EEEEEEEEECC----eEeeeceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhhcccCCCCceEEEEeccccccc
Confidence 37899999853 4599999999988 999999 56665 57999997 7999999997
Q ss_pred ----------------cccCC-------C-c---hHHhcccEEEEccC-CCCCCCCCHHHHHHHhHhhcCCChHHHHHHH
Q psy7365 116 ----------------DHDIR-------T-D---MTTIRRSLGVCPQY-NALFDKLTVEEHMWFYSQLKQVPKDLAQLEI 167 (601)
Q Consensus 116 ----------------g~~~~-------~-~---~~~~~~~ig~v~Q~-~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 167 (601)
|.++. . . ....++.+||+||+ +.+|+.+||+||+.|+....+.+..+.+.++
T Consensus 70 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~ 149 (520)
T TIGR03269 70 GYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRA 149 (520)
T ss_pred cccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHH
Confidence 32221 0 0 12345679999998 5789999999999998776677666667789
Q ss_pred HHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchh
Q psy7365 168 SNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLT 247 (601)
Q Consensus 168 ~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~ 247 (601)
.++++.+||++..++++.+|||||||||++|||| +.+
T Consensus 150 ~~~l~~~gl~~~~~~~~~~LSgGq~qrv~iA~al--------------------------------------~~~----- 186 (520)
T TIGR03269 150 VDLIEMVQLSHRITHIARDLSGGEKQRVVLARQL--------------------------------------AKE----- 186 (520)
T ss_pred HHHHHHcCChhhhhcCcccCCHHHHHHHHHHHHH--------------------------------------hcC-----
Confidence 9999999999989999999999999999865432 232
Q ss_pred hHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHH
Q psy7365 248 HKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEA 327 (601)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~ 327 (601)
|++|||||||++||+.++.+++++|+++. +..|+|||++|||++++
T Consensus 187 ------------------------------p~lllLDEPt~~LD~~~~~~l~~~l~~l~----~~~g~tviivtHd~~~~ 232 (520)
T TIGR03269 187 ------------------------------PFLFLADEPTGTLDPQTAKLVHNALEEAV----KASGISMVLTSHWPEVI 232 (520)
T ss_pred ------------------------------CCEEEeeCCcccCCHHHHHHHHHHHHHHH----HhcCcEEEEEeCCHHHH
Confidence 58999999999999999999999999873 23489999999999999
Q ss_pred HhcCCEEEEecCCccccccCcc------------------------cc--c---cccc------c---------------
Q psy7365 328 DLLGDRIAIIAAGKLQCCGSSV------------------------FL--K---NSFA------R--------------- 357 (601)
Q Consensus 328 ~~l~Drv~vL~~GkIv~~G~~~------------------------lL--k---~~~g------~--------------- 357 (601)
..+||++++|.+|+++..++.. .+ + -.+. .
T Consensus 233 ~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~ 312 (520)
T TIGR03269 233 EDLSDKAIWLENGEIKEEGTPDEVVAVFMEGVSEVEKECEVEVGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEI 312 (520)
T ss_pred HHhcCEEEEEeCCEEeeecCHHHHHHHHHhhchhhccccccCCCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCE
Confidence 9999999999999986443210 00 0 0000 0
Q ss_pred --------------------------c--ccc-ccc---cCCc------ccccccccCCCCcccCCCCCHHHHHHHhHHh
Q psy7365 358 --------------------------G--YYL-SLD---MKSA------PQKSYIGYCPQFDALNDRLTPREHLEFYSRV 399 (601)
Q Consensus 358 --------------------------g--~~i-gld---~~~~------~~~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~ 399 (601)
| ++. +.+ +... ..++++||+||++.+++.+||.||+.+...+
T Consensus 313 ~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~ 392 (520)
T TIGR03269 313 FGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGL 392 (520)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHc
Confidence 0 000 000 0000 1134699999999899999999999875432
Q ss_pred cCCChhHHHHHHHHHHHHcCCCc-----ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q psy7365 400 RNLPSVLLNTIVNESLNKFALGH-----YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIE 474 (601)
Q Consensus 400 ~g~~~~~~~~~~~~lLe~~~L~~-----~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~ 474 (601)
+.+....++++.++++.++|.+ ..++++.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|+
T Consensus 393 -~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~ 471 (520)
T TIGR03269 393 -ELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSIL 471 (520)
T ss_pred -CCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 3333334567889999999975 5789999999999999999999999999999999999999999999999999
Q ss_pred HHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 475 RAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 475 ~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
+++++ |.|||++|||++++..+|||+++|++|+++..|+++++.+.
T Consensus 472 ~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 518 (520)
T TIGR03269 472 KAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVEE 518 (520)
T ss_pred HHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 99765 89999999999999999999999999999999999988654
No 9
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-63 Score=555.88 Aligned_cols=376 Identities=20% Similarity=0.318 Sum_probs=301.3
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 11 ~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~liG~NGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~ 78 (510)
T PRK15439 11 LLCARSISKQYSG----VEVLKGIDFTLHAGEVHALLGGNGA--GKSTL------MKIIAGIVPPDSGTLEIGGNPCARL 78 (510)
T ss_pred eEEEEeEEEEeCC----ceeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEECCCC
Confidence 4568999999864 3599999999988 999999 56665 5799999999999999999987542
Q ss_pred -hHH-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 -MTT-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 -~~~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
... .+..+||+||++.+|+++||.||+.|+... ..+.++++.++++.+||.+..++++.+||||||||+++||+
T Consensus 79 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~a 154 (510)
T PRK15439 79 TPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK----RQASMQKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRG 154 (510)
T ss_pred CHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc----chHHHHHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHH
Confidence 222 335799999999999999999999886432 23345678899999999999999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 155 L--------------------------------------~~~-----------------------------------p~l 161 (510)
T PRK15439 155 L--------------------------------------MRD-----------------------------------SRI 161 (510)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 3 232 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc---------
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL--------- 351 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL--------- 351 (601)
|||||||+|||+.++..++++|+++. .+|+|||++|||++++..+||++++|.+|+++..+....+
T Consensus 162 llLDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 236 (510)
T PRK15439 162 LILDEPTASLTPAETERLFSRIRELL-----AQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDDIIQAI 236 (510)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHHHHHHH
Confidence 99999999999999999999999873 3589999999999999999999999999998654422100
Q ss_pred -----------------------ccc-ccc----------------------cc---cccc-------------------
Q psy7365 352 -----------------------KNS-FAR----------------------GY---YLSL------------------- 363 (601)
Q Consensus 352 -----------------------k~~-~g~----------------------g~---~igl------------------- 363 (601)
... .++ |. ++|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~ 316 (510)
T PRK15439 237 TPAAREKSLSASQKLWLELPGNRRQQAAGAPVLTVEDLTGEGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPAR 316 (510)
T ss_pred hCccccccccccccccccccccccccCCCCceEEEeCCCCCCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC
Confidence 000 000 00 0000
Q ss_pred ---------ccCCcc----cccccccCCCCc---ccCCCCCHHHHHHHhHH--h-cCCChhHHHHHHHHHHHHcCCC-cc
Q psy7365 364 ---------DMKSAP----QKSYIGYCPQFD---ALNDRLTPREHLEFYSR--V-RNLPSVLLNTIVNESLNKFALG-HY 423 (601)
Q Consensus 364 ---------d~~~~~----~~~~ig~v~Q~~---~l~~~lTv~E~L~~~~~--~-~g~~~~~~~~~~~~lLe~~~L~-~~ 423 (601)
++.... .++.++|+||++ .+++.+|+.+|+.+... . ........++.++++++.++|. +.
T Consensus 317 ~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 396 (510)
T PRK15439 317 GGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNH 396 (510)
T ss_pred CcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCC
Confidence 000000 124699999984 48888999999864311 1 1111222345688999999997 78
Q ss_pred cccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEE
Q psy7365 424 SDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM 503 (601)
Q Consensus 424 ~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL 503 (601)
.++++.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||+++++.+|||+++|
T Consensus 397 ~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l 476 (510)
T PRK15439 397 AEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVM 476 (510)
T ss_pred ccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEE
Confidence 89999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred eCCEEEEecCHHHHH
Q psy7365 504 VNGQFTCLGSATHLK 518 (601)
Q Consensus 504 ~~G~iv~~G~~~~L~ 518 (601)
++|++++.|+++++.
T Consensus 477 ~~G~i~~~~~~~~~~ 491 (510)
T PRK15439 477 HQGEISGALTGAAIN 491 (510)
T ss_pred ECCEEEEEEccccCC
Confidence 999999999887543
No 10
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5.6e-63 Score=549.55 Aligned_cols=376 Identities=20% Similarity=0.290 Sum_probs=298.8
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC--CeeEEEEccccCCC
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV--SSGTAKIYDHDIRT 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~--~~G~v~~~g~~~~~ 121 (601)
..++||++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.++..
T Consensus 2 l~i~~l~~~~~~----~~il~~isl~i~~Ge~~~liG~nGs--GKSTL------l~~i~G~~~~~~~~G~i~~~g~~~~~ 69 (500)
T TIGR02633 2 LEMKGIVKTFGG----VKALDGIDLEVRPGECVGLCGENGA--GKSTL------MKILSGVYPHGTWDGEIYWSGSPLKA 69 (500)
T ss_pred EEEEeEEEEeCC----eEeecceEEEEeCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCCCeEEEECCEECCC
Confidence 347899999863 4599999999988 999999 57665 6799999997 79999999998854
Q ss_pred c-h-HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc--C--CChHHHHHHHHHHHHHcCCCccc-CCccccCChHHHhh
Q psy7365 122 D-M-TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK--Q--VPKDLAQLEISNMIGDLGIPHKR-TSLANTLSGGMQRK 194 (601)
Q Consensus 122 ~-~-~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~--~--~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~~qr 194 (601)
. . ...++.+||+||++.+|+.+||.||+.|+.... + .+.++.+.++.++++.+|+.+.. ++++.+||||||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qr 149 (500)
T TIGR02633 70 SNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQL 149 (500)
T ss_pred CCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHH
Confidence 2 2 223567999999999999999999999875432 1 33445567788999999998764 67899999999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
|++|||| +.+
T Consensus 150 v~iA~al--------------------------------------~~~-------------------------------- 159 (500)
T TIGR02633 150 VEIAKAL--------------------------------------NKQ-------------------------------- 159 (500)
T ss_pred HHHHHHH--------------------------------------hhC--------------------------------
Confidence 9865433 222
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc----
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF---- 350 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l---- 350 (601)
|+++||||||+|||+.++..++++|+++. ..|+|||++|||++++..+||++++|.+|+++..+.+..
T Consensus 160 ---p~lllLDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 160 ---ARLLILDEPSSSLTEKETEILLDIIRDLK-----AHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred ---CCEEEEeCCCCCCCHHHHHHHHHHHHHHH-----hCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 58999999999999999999999999873 358999999999999999999999999999864332100
Q ss_pred --------------------------cc--c---cc---ccccc----------------c---------------cc--
Q psy7365 351 --------------------------LK--N---SF---ARGYY----------------L---------------SL-- 363 (601)
Q Consensus 351 --------------------------Lk--~---~~---g~g~~----------------i---------------gl-- 363 (601)
++ + .+ +.... + |.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~ 311 (500)
T TIGR02633 232 DIITMMVGREITSLYPHEPHEIGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYP 311 (500)
T ss_pred HHHHHHhCccccccccccccCCCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCC
Confidence 00 0 00 00000 0 00
Q ss_pred ------------ccCCc----ccccccccCCCCc---ccCCCCCHHHHHHHhHH--hc---CCChhHHHHHHHHHHHHcC
Q psy7365 364 ------------DMKSA----PQKSYIGYCPQFD---ALNDRLTPREHLEFYSR--VR---NLPSVLLNTIVNESLNKFA 419 (601)
Q Consensus 364 ------------d~~~~----~~~~~ig~v~Q~~---~l~~~lTv~E~L~~~~~--~~---g~~~~~~~~~~~~lLe~~~ 419 (601)
++... ..++++||+||++ .+++.+|+++|+.+... +. +......++++.++++.++
T Consensus 312 p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 391 (500)
T TIGR02633 312 GKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLK 391 (500)
T ss_pred CCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcC
Confidence 00000 0135699999996 58889999999977421 11 1222334566889999999
Q ss_pred CCc-ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCC
Q psy7365 420 LGH-YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCT 498 (601)
Q Consensus 420 L~~-~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~d 498 (601)
+.+ ..++++.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||++++..+||
T Consensus 392 l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d 471 (500)
T TIGR02633 392 VKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSD 471 (500)
T ss_pred ccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCC
Confidence 974 6899999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred EEEEEeCCEEEEecCHH
Q psy7365 499 KLTIMVNGQFTCLGSAT 515 (601)
Q Consensus 499 rv~iL~~G~iv~~G~~~ 515 (601)
|+++|++|++++.++.+
T Consensus 472 ~v~~l~~G~i~~~~~~~ 488 (500)
T TIGR02633 472 RVLVIGEGKLKGDFVNH 488 (500)
T ss_pred EEEEEECCEEEEEEccc
Confidence 99999999999877644
No 11
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-62 Score=546.32 Aligned_cols=373 Identities=20% Similarity=0.294 Sum_probs=294.9
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--h
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD--M 123 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~--~ 123 (601)
++||++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|+++... .
T Consensus 1 ~~nl~~~~~~----~~il~~vs~~i~~Ge~~~liG~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 68 (491)
T PRK10982 1 MSNISKSFPG----VKALDNVNLKVRPHSIHALMGENGA--GKSTL------LKCLFGIYQKDSGSILFQGKEIDFKSSK 68 (491)
T ss_pred CCceEEEeCC----EEeeeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHcCCCCCCceEEEECCEECCCCCHH
Confidence 4688998853 4599999999988 999999 56665 5799999999999999999987532 2
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHh-hcC--CChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ-LKQ--VPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~-~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
...++.+||+||++.+++.+||.||+.|+.. ..+ .+..+..+++.++++.+|+.+..++++.+|||||||||++||+
T Consensus 69 ~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~a 148 (491)
T PRK10982 69 EALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKA 148 (491)
T ss_pred HHHhCCEEEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHH
Confidence 3346789999999999999999999987642 122 2344455678899999999998999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 149 l--------------------------------------~~~-----------------------------------p~l 155 (491)
T PRK10982 149 F--------------------------------------SYN-----------------------------------AKI 155 (491)
T ss_pred H--------------------------------------HhC-----------------------------------CCE
Confidence 2 222 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc---------
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL--------- 351 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL--------- 351 (601)
|||||||+|||+.++..++++|+++. ..|+|||++||+++++..+||++++|.+|+++..+++...
T Consensus 156 llLDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~ 230 (491)
T PRK10982 156 VIMDEPTSSLTEKEVNHLFTIIRKLK-----ERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMDKIIAMM 230 (491)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHH-----hCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHHHHHHHH
Confidence 99999999999999999999999873 3589999999999999999999999999998654421000
Q ss_pred ---------c--cc-cc-------------------------cc-------------------------------ccccc
Q psy7365 352 ---------K--NS-FA-------------------------RG-------------------------------YYLSL 363 (601)
Q Consensus 352 ---------k--~~-~g-------------------------~g-------------------------------~~igl 363 (601)
. .. .. .| ++.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~ 310 (491)
T PRK10982 231 VGRSLTQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGK 310 (491)
T ss_pred hCCCcccccccccCCCCCcEEEEeCcccccCcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCE
Confidence 0 00 00 00 00000
Q ss_pred ccCCcc----cccccccCCCCc---ccCCCCCHHHH-----HHHhHHhcCC-ChhHHHHHHHHHHHHcCCC-cccccccC
Q psy7365 364 DMKSAP----QKSYIGYCPQFD---ALNDRLTPREH-----LEFYSRVRNL-PSVLLNTIVNESLNKFALG-HYSDREVR 429 (601)
Q Consensus 364 d~~~~~----~~~~ig~v~Q~~---~l~~~lTv~E~-----L~~~~~~~g~-~~~~~~~~~~~lLe~~~L~-~~~~~~~~ 429 (601)
+..... .++.+||+||++ .+|+++|+.+| +.++...++. .....++.+.++++.+++. +..++++.
T Consensus 311 ~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 390 (491)
T PRK10982 311 KINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIG 390 (491)
T ss_pred ECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccccc
Confidence 010000 134489999985 47888888776 3322222232 2233456678899999995 56899999
Q ss_pred cCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEE
Q psy7365 430 TLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT 509 (601)
Q Consensus 430 ~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv 509 (601)
+|||||||||+||+|++.+|++|||||||+|||+.+++.++++|+++.++|.|||++|||++++..+|||+++|++|+++
T Consensus 391 ~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~ 470 (491)
T PRK10982 391 SLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVA 470 (491)
T ss_pred cCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred EecCH
Q psy7365 510 CLGSA 514 (601)
Q Consensus 510 ~~G~~ 514 (601)
..++.
T Consensus 471 ~~~~~ 475 (491)
T PRK10982 471 GIVDT 475 (491)
T ss_pred EEEcc
Confidence 77654
No 12
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.5e-61 Score=590.15 Aligned_cols=226 Identities=49% Similarity=0.846 Sum_probs=198.0
Q ss_pred ccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEE
Q psy7365 373 YIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLI 452 (601)
Q Consensus 373 ~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lL 452 (601)
.||||||++.+++.+|++|++.+++.+++.+.++.++.++++++.++|.+..++++++|||||||||+||+||+++|+++
T Consensus 2013 ~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~P~VL 2092 (2272)
T TIGR01257 2013 NMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLV 2092 (2272)
T ss_pred hEEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 37899999999999999999999988888876666677889999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEec
Q psy7365 453 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCA 532 (601)
Q Consensus 453 lLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~ 532 (601)
||||||+||||.+++.+|++|++++++|+|||++||+++|++++|||+++|++|++++.|++++++++++.+|.++++++
T Consensus 2093 LLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~~g~g~~l~i~~~ 2172 (2272)
T TIGR01257 2093 LLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFGDGYIVTMKIK 2172 (2272)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHHhCCceEEEEEEc
Confidence 99999999999999999999999987899999999999999999999999999999999999999999999998888775
Q ss_pred CCCc------hhHHHHHhhcCCCceeEEeeCcEEEEEEcCCcccHHHHHHHHHHccccCCCeeEEEecCCCCCCC
Q psy7365 533 EGRS------ADAQTYLSLNLPVADLVETHATQLQYRISGAVSDLGALFRTLESAKTEAGLIVDYSLSQTSLEDS 601 (601)
Q Consensus 533 ~~~~------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~i~~~~v~~~sLEdv 601 (601)
.... +.+..++...+|+....+.+.+.+++.++.. ..+++++.+++++.+++ |.+|+++++|||||
T Consensus 2173 ~~~~~~~~~~~~v~~~i~~~fp~a~~~e~~~~~l~~~i~~~--~~~~if~~L~~~k~~l~-I~dysvsqtSLE~V 2244 (2272)
T TIGR01257 2173 SPKDDLLPDLNPVEQFFQGNFPGSVQRERHYNMLQFQVSSS--SLARIFQLLISHKDSLL-IEEYSVTQTTLDQV 2244 (2272)
T ss_pred CcchhhhhHHHHHHHHHhhcCccceeeccccceEEEEeCcc--cHHHHHHHHHhcCCCCC-eEEEEcCCCCHHHH
Confidence 3211 1233445556787665565667778888643 68899999988766677 99999999999986
No 13
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-62 Score=528.42 Aligned_cols=380 Identities=21% Similarity=0.341 Sum_probs=315.4
Q ss_pred ccchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEcccc
Q psy7365 45 MGAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHD 118 (601)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~ 118 (601)
+..++..++|++|+|+.. +||+|+||++.+ +|-||| ||||| +|+|+|.++|++|+|.++|++
T Consensus 4 ~~~~ll~~~~i~K~FggV----~AL~~v~l~v~~GEV~aL~GeNGA--GKSTL------mKiLsGv~~p~~G~I~~~G~~ 71 (500)
T COG1129 4 STPPLLELRGISKSFGGV----KALDGVSLTVRPGEVHALLGENGA--GKSTL------MKILSGVYPPDSGEILIDGKP 71 (500)
T ss_pred CccceeeeecceEEcCCc----eeeccceeEEeCceEEEEecCCCC--CHHHH------HHHHhCcccCCCceEEECCEE
Confidence 345567799999999754 599999999998 999999 67766 789999999999999999998
Q ss_pred CC--CchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcC----CChHHHHHHHHHHHHHcCCCcccCCccccCChHHH
Q psy7365 119 IR--TDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQ----VPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQ 192 (601)
Q Consensus 119 ~~--~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~ 192 (601)
+. ++..+...+|+.|+|+..++|++||.||+.++.+... +++..+++++.++|+.+|+....+.++.+||+|||
T Consensus 72 ~~~~sp~~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~Lsiaqr 151 (500)
T COG1129 72 VAFSSPRDALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGDLSIAQR 151 (500)
T ss_pred ccCCCHHHHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhhhCCHHHH
Confidence 85 3455667899999999999999999999998877543 67888999999999999997669999999999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
|.|+||||+..
T Consensus 152 Q~VeIArAl~~--------------------------------------------------------------------- 162 (500)
T COG1129 152 QMVEIARALSF--------------------------------------------------------------------- 162 (500)
T ss_pred HHHHHHHHHhc---------------------------------------------------------------------
Confidence 99987654332
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc-cc-
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS-VF- 350 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~-~l- 350 (601)
+++++|||||||+|+..+.+.++++++++ +.+|.++|++||+++|+.++|||+.||++|+.+.+... ..
T Consensus 163 ----~arllIlDEPTaaLt~~E~~~Lf~~ir~L-----k~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~ 233 (500)
T COG1129 163 ----DARVLILDEPTAALTVKETERLFDLIRRL-----KAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAET 233 (500)
T ss_pred ----CCCEEEEcCCcccCCHHHHHHHHHHHHHH-----HhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCC
Confidence 25899999999999999999999999999 46799999999999999999999999999998765541 10
Q ss_pred ------------------cc-cc--cc-----------------------cccccc------------------cc----
Q psy7365 351 ------------------LK-NS--FA-----------------------RGYYLS------------------LD---- 364 (601)
Q Consensus 351 ------------------Lk-~~--~g-----------------------~g~~ig------------------ld---- 364 (601)
.. .. .+ .|-++| .+
T Consensus 234 ~~~~lv~~MvGr~~~~~~~~~~~~~~~~~~l~v~~l~~~~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~ 313 (500)
T COG1129 234 SEDELVRLMVGRELEDLFPEPPEEGIGEPVLEVRNLSGGGKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASS 313 (500)
T ss_pred CHHHHHHHhhCcchhhhcccccccCCCCcEEEEecCCCCCceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCC
Confidence 00 00 00 000000 00
Q ss_pred ------cC-------CcccccccccCCCC---cccCCCCCHHHHHHHhH--Hhc---CCChhHHHHHHHHHHHHcCCC-c
Q psy7365 365 ------MK-------SAPQKSYIGYCPQF---DALNDRLTPREHLEFYS--RVR---NLPSVLLNTIVNESLNKFALG-H 422 (601)
Q Consensus 365 ------~~-------~~~~~~~ig~v~Q~---~~l~~~lTv~E~L~~~~--~~~---g~~~~~~~~~~~~lLe~~~L~-~ 422 (601)
.+ ....+..|+|||+| .+++..+++.+|+.+.. ++. -+.....++.++++.+.+++. .
T Consensus 314 G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~ 393 (500)
T COG1129 314 GEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTP 393 (500)
T ss_pred ceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccC
Confidence 00 01123569999998 46899999999998762 111 133444556788999999995 5
Q ss_pred ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEE
Q psy7365 423 YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTI 502 (601)
Q Consensus 423 ~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~i 502 (601)
..+.++.+||||+||||.||++|+.+|++|||||||.|+|..++.+++++|++++++|++||++|.+++|+..+||||++
T Consensus 394 s~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlV 473 (500)
T COG1129 394 SPEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILV 473 (500)
T ss_pred CccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEE
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCEEEEecCH
Q psy7365 503 MVNGQFTCLGSA 514 (601)
Q Consensus 503 L~~G~iv~~G~~ 514 (601)
|++|+++.+-+.
T Consensus 474 m~~Gri~~e~~~ 485 (500)
T COG1129 474 MREGRIVGELDR 485 (500)
T ss_pred EECCEEEEEecc
Confidence 999999885443
No 14
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=8.5e-61 Score=495.34 Aligned_cols=396 Identities=22% Similarity=0.333 Sum_probs=328.0
Q ss_pred ccchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEE
Q psy7365 45 MGAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAK 113 (601)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~ 113 (601)
|..++..++||+..|+..++...+++|+||++.+ .|-||+ ||| -|+ ..|+|++|. -+|+|.
T Consensus 2 ~~~~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGS--GKS-----vTa-~sim~LLp~~~~~~~sg~i~ 73 (534)
T COG4172 2 MTMPLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGS--GKS-----VTA-LSILGLLPSPAAAHPSGSIL 73 (534)
T ss_pred CCCcceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCC--Ccc-----HHH-HHHHHhcCCCcccCccceeE
Confidence 3456677999999999999999999999999988 999999 455 444 477899875 489999
Q ss_pred EccccCCCc-hH---Hhc-ccEEEEccCC--CCCCCCCHHHHHHHhHhh-cCCChHHHHHHHHHHHHHcCCCcc---cCC
Q psy7365 114 IYDHDIRTD-MT---TIR-RSLGVCPQYN--ALFDKLTVEEHMWFYSQL-KQVPKDLAQLEISNMIGDLGIPHK---RTS 182 (601)
Q Consensus 114 ~~g~~~~~~-~~---~~~-~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~gl~~~---~~~ 182 (601)
++|.++... .. .+| ++|+++||+| ++.|-.|+..++.-...+ .|+.+..++.|+.++|+.+||.+. .++
T Consensus 74 f~G~dll~~se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~ 153 (534)
T COG4172 74 FDGEDLLAASERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDA 153 (534)
T ss_pred EcChhhhcCCHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhh
Confidence 999998542 22 233 5799999998 588889999999876665 478899999999999999999863 689
Q ss_pred ccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcch
Q psy7365 183 LANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTS 262 (601)
Q Consensus 183 ~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 262 (601)
+|++|||||+|||.||.| ++++
T Consensus 154 yPHeLSGGqRQRVMIAMA--------------------------------------Lan~-------------------- 175 (534)
T COG4172 154 YPHELSGGQRQRVMIAMA--------------------------------------LANE-------------------- 175 (534)
T ss_pred CCcccCcchhhHHHHHHH--------------------------------------HcCC--------------------
Confidence 999999999999875332 3344
Q ss_pred hHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 263 ILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 263 ~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
|++||-||||++||..-+.++.++|++++ ++.|.+++++|||+..+.+++|||++|.+|++
T Consensus 176 ---------------P~lLIADEPTTALDVtvQaQIL~Ll~~Lq----~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~i 236 (534)
T COG4172 176 ---------------PDLLIADEPTTALDVTVQAQILDLLKELQ----AELGMAILFITHDLGIVRKFADRVYVMQHGEI 236 (534)
T ss_pred ---------------CCeEeecCCcchhhhhhHHHHHHHHHHHH----HHhCcEEEEEeccHHHHHHhhhhEEEEeccEE
Confidence 59999999999999999999999999995 35699999999999999999999999999999
Q ss_pred ccccCccc--------------------------------c-----------cccc------------------------
Q psy7365 343 QCCGSSVF--------------------------------L-----------KNSF------------------------ 355 (601)
Q Consensus 343 v~~G~~~l--------------------------------L-----------k~~~------------------------ 355 (601)
+..+.... + +..+
T Consensus 237 vE~~~t~~lF~~PqHpYTr~Ll~aeP~g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTl 316 (534)
T COG4172 237 VETGTTETLFAAPQHPYTRKLLAAEPSGDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTL 316 (534)
T ss_pred eecCcHHHHhhCCCChHHHHHHhcCCCCCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeE
Confidence 87663210 0 0000
Q ss_pred ------c------------------cccccccccC------CcccccccccCCCCc--ccCCCCCHHHHHHHhHHhcC--
Q psy7365 356 ------A------------------RGYYLSLDMK------SAPQKSYIGYCPQFD--ALNDRLTPREHLEFYSRVRN-- 401 (601)
Q Consensus 356 ------g------------------~g~~igld~~------~~~~~~~ig~v~Q~~--~l~~~lTv~E~L~~~~~~~g-- 401 (601)
| ..++.|.++. -.+.|+++-+||||| ++.|.|||.+.+.-....+.
T Consensus 317 GlVGESGSGKsTlG~allrL~~s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ 396 (534)
T COG4172 317 GLVGESGSGKSTLGLALLRLIPSQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPK 396 (534)
T ss_pred EEEecCCCCcchHHHHHHhhcCcCceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCC
Confidence 0 0001111111 123467899999998 48899999999887766654
Q ss_pred CChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhC-
Q psy7365 402 LPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSE- 479 (601)
Q Consensus 402 ~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~- 479 (601)
.+..+..+++.++|+.+||+ ..++|+|.++|||||||++||||++.+|++++||||||.||..-+.++.++++++.++
T Consensus 397 ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~ 476 (534)
T COG4172 397 LSAAERDQRVIEALEEVGLDPATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKH 476 (534)
T ss_pred CCHHHHHHHHHHHHHHcCCChhHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHh
Confidence 45667778899999999997 5789999999999999999999999999999999999999999999999999999755
Q ss_pred CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCce
Q psy7365 480 GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGY 525 (601)
Q Consensus 480 G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~ 525 (601)
|.+.+++|||+..+.++||+|++|++|+|+..|+.+++.......|
T Consensus 477 ~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~Y 522 (534)
T COG4172 477 GLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEY 522 (534)
T ss_pred CCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHH
Confidence 9999999999999999999999999999999999999987654443
No 15
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.3e-59 Score=519.36 Aligned_cols=364 Identities=23% Similarity=0.246 Sum_probs=281.5
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. .
T Consensus 4 l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~liG~nGs--GKSTL------l~~l~G~~~p~~G~i~~~~~~~~~~~ 71 (490)
T PRK10938 4 LQISQGTFRLSD----TKTLQLPSLTLNAGDSWAFVGANGS--GKSAL------ARALAGELPLLSGERQSQFSHITRLS 71 (490)
T ss_pred EEEEeEEEEcCC----eeecccceEEEcCCCEEEEECCCCC--CHHHH------HHHHhccCCCCCceEEECCcccccCC
Confidence 558999999864 3499999999988 999999 56665 579999999999999999987643 2
Q ss_pred hHHhcccEEEEccCCCC--C------CCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhh
Q psy7365 123 MTTIRRSLGVCPQYNAL--F------DKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRK 194 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~--~------~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr 194 (601)
....++.+||+||++.. + ..+||.|++.+. ...++++.++++.+||.+..++++.+||||||||
T Consensus 72 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qr 143 (490)
T PRK10938 72 FEQLQKLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDE--------VKDPARCEQLAQQFGITALLDRRFKYLSTGETRK 143 (490)
T ss_pred HHHHHHHhceeccCcchhhcccchhhccccHHHhcccc--------hhHHHHHHHHHHHcCCHhhhhCCcccCCHHHHHH
Confidence 33345679999998753 2 157888887542 1234678899999999999999999999999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
+++|+|+ +.+
T Consensus 144 v~la~al--------------------------------------~~~-------------------------------- 153 (490)
T PRK10938 144 TLLCQAL--------------------------------------MSE-------------------------------- 153 (490)
T ss_pred HHHHHHH--------------------------------------HcC--------------------------------
Confidence 9854432 233
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc----
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF---- 350 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l---- 350 (601)
|++|||||||+|||+.+++.++++|+++. .+|+|||++||+++++.++||++++|.+|+++..+.+..
T Consensus 154 ---p~lllLDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 154 ---PDLLILDEPFDGLDVASRQQLAELLASLH-----QSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred ---CCEEEEcCCcccCCHHHHHHHHHHHHHHH-----hcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 58999999999999999999999999873 358999999999999999999999999999865432100
Q ss_pred -----------cc----------------c-------------cccc-------------cc------------------
Q psy7365 351 -----------LK----------------N-------------SFAR-------------GY------------------ 359 (601)
Q Consensus 351 -----------Lk----------------~-------------~~g~-------------g~------------------ 359 (601)
+. . .++. |.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~ 305 (490)
T PRK10938 226 ALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSL 305 (490)
T ss_pred hhhhhhhhhhccCccccCcccccccccccCCCCceEEEeceEEEECCeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 00 0 0000 00
Q ss_pred ccccccC--------------Cc----ccccccccCCCCcccCC--CCCHHHHHHHhHH----hcCCChhHHHHHHHHHH
Q psy7365 360 YLSLDMK--------------SA----PQKSYIGYCPQFDALND--RLTPREHLEFYSR----VRNLPSVLLNTIVNESL 415 (601)
Q Consensus 360 ~igld~~--------------~~----~~~~~ig~v~Q~~~l~~--~lTv~E~L~~~~~----~~g~~~~~~~~~~~~lL 415 (601)
..|.... .. ..++++||++|++.++. ..++.+++.+... .+.......++++++++
T Consensus 306 l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 385 (490)
T PRK10938 306 ITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWL 385 (490)
T ss_pred HcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHH
Confidence 0000000 00 01356999999876543 3467666543211 11111223345688999
Q ss_pred HHcCCCc-ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCC-cEEEEEccChhHH
Q psy7365 416 NKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEG-RCVILTSHNMEEC 493 (601)
Q Consensus 416 e~~~L~~-~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G-~tVllsTHdl~e~ 493 (601)
+.++|.+ ..++++.+|||||||||+||+||+.+|++|||||||+|||+.+++.++++|++++++| .|||++|||++++
T Consensus 386 ~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~ 465 (490)
T PRK10938 386 DILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDA 465 (490)
T ss_pred HHcCCchhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhh
Confidence 9999987 8899999999999999999999999999999999999999999999999999998775 4799999999999
Q ss_pred Hh-hCCEEEEEeCCEEEEe
Q psy7365 494 EA-LCTKLTIMVNGQFTCL 511 (601)
Q Consensus 494 ~~-l~drv~iL~~G~iv~~ 511 (601)
.. +|||+++|++|+++..
T Consensus 466 ~~~~~d~v~~l~~G~i~~~ 484 (490)
T PRK10938 466 PACITHRLEFVPDGDIYRY 484 (490)
T ss_pred hhhhheeEEEecCCceEEe
Confidence 87 6999999999998765
No 16
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=9.7e-59 Score=493.10 Aligned_cols=379 Identities=24% Similarity=0.374 Sum_probs=319.9
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC-
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR- 120 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~- 120 (601)
++..+++++|.|+ +..|.+||||++.+ ||-||| ||||| ++||.|+++|++|+|.++|+++.
T Consensus 3 ~~l~~~~itK~f~----~~~And~V~l~v~~GeIHaLLGENGA--GKSTL------m~iL~G~~~P~~GeI~v~G~~v~~ 70 (501)
T COG3845 3 PALEMRGITKRFP----GVVANDDVSLSVKKGEIHALLGENGA--GKSTL------MKILFGLYQPDSGEIRVDGKEVRI 70 (501)
T ss_pred ceEEEeccEEEcC----CEEecCceeeeecCCcEEEEeccCCC--CHHHH------HHHHhCcccCCcceEEECCEEecc
Confidence 4456899999997 45599999999988 999999 67776 78999999999999999999874
Q ss_pred -CchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc---CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhh
Q psy7365 121 -TDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK---QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 121 -~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
.+.++++.+||+|+|++.+++.+||.||+.++.+.. .++..+.++++.++.+++||+-..++++.+||-||||||.
T Consensus 71 ~sP~dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~dLsVG~qQRVE 150 (501)
T COG3845 71 KSPRDAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVADLSVGEQQRVE 150 (501)
T ss_pred CCHHHHHHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceeecCCcchhHHHH
Confidence 567778899999999999999999999999988642 3577888999999999999999999999999999999999
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
|.|+||.+
T Consensus 151 IlKaLyr~------------------------------------------------------------------------ 158 (501)
T COG3845 151 ILKALYRG------------------------------------------------------------------------ 158 (501)
T ss_pred HHHHHhcC------------------------------------------------------------------------
Confidence 87766544
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc-c-----
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV-F----- 350 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~-l----- 350 (601)
|++|||||||+-|.|.+.+++++.++++ +.+|+|||++||.++|+.++|||+.+|+.|+++....+. .
T Consensus 159 -a~iLILDEPTaVLTP~E~~~lf~~l~~l-----~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~~~~~t~~e 232 (501)
T COG3845 159 -ARLLILDEPTAVLTPQEADELFEILRRL-----AAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDPVAETTEEE 232 (501)
T ss_pred -CCEEEEcCCcccCCHHHHHHHHHHHHHH-----HHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecCCCCCCHHH
Confidence 5899999999999999999999999998 467999999999999999999999999999976433210 0
Q ss_pred -----------c---cc------------------c-------------------------------------------c
Q psy7365 351 -----------L---KN------------------S-------------------------------------------F 355 (601)
Q Consensus 351 -----------L---k~------------------~-------------------------------------------~ 355 (601)
. +. . .
T Consensus 233 la~lMvG~~v~~~~~~~~~~pg~~vL~V~~L~v~~~~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~ 312 (501)
T COG3845 233 LAELMVGREVVLRVVKPPSTPGEVVLEVEDLSVKDRRGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPAS 312 (501)
T ss_pred HHHHhcCCccccccccCCCCCCCeEEEEeeeEeecCCCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCC
Confidence 0 00 0 0
Q ss_pred cccccccccc-CCcc----cccccccCCCCc---ccCCCCCHHHHHHHhHHh------cC-CChhHHHHHHHHHHHHcCC
Q psy7365 356 ARGYYLSLDM-KSAP----QKSYIGYCPQFD---ALNDRLTPREHLEFYSRV------RN-LPSVLLNTIVNESLNKFAL 420 (601)
Q Consensus 356 g~g~~igld~-~~~~----~~~~ig~v~Q~~---~l~~~lTv~E~L~~~~~~------~g-~~~~~~~~~~~~lLe~~~L 420 (601)
++....+.++ .... .+..+||+|+|. ++.+++|+.||+.+.... ++ +.+....+.+.+++++|++
T Consensus 313 G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdV 392 (501)
T COG3845 313 GRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDV 392 (501)
T ss_pred ceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCc
Confidence 0000111121 0001 134699999985 588999999999774321 12 4566778889999999999
Q ss_pred C-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCE
Q psy7365 421 G-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTK 499 (601)
Q Consensus 421 ~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~dr 499 (601)
. .-.+.++.+||||++||+-+||-|..+|++||..+||.|||..+.+.+.+.|.+.+++|++|+++|-|++|+..+|||
T Consensus 393 r~~~~~~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDr 472 (501)
T COG3845 393 RAPSPDAPARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDR 472 (501)
T ss_pred cCCCCCcchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhhe
Confidence 6 556778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCEEEEecCHHH
Q psy7365 500 LTIMVNGQFTCLGSATH 516 (601)
Q Consensus 500 v~iL~~G~iv~~G~~~~ 516 (601)
|.+|.+|+++...++++
T Consensus 473 IaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 473 IAVIYEGRIVGIVPPEE 489 (501)
T ss_pred eeeeeCCceeccccccc
Confidence 99999999998887765
No 17
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-57 Score=507.60 Aligned_cols=359 Identities=20% Similarity=0.282 Sum_probs=282.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++||++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.
T Consensus 3 ~i~~ls~~~~~----~~il~~vsl~i~~Ge~~~liG~NGs--GKSTL------l~~l~Gl~~p~~G~i~~~~~------- 63 (530)
T PRK15064 3 STANITMQFGA----KPLFENISVKFGGGNRYGLIGANGC--GKSTF------MKILGGDLEPSAGNVSLDPN------- 63 (530)
T ss_pred EEEEEEEEeCC----cEeEeCCEEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEecCC-------
Confidence 47899999853 3599999999988 999999 67765 67999999999999999873
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHh-h----------cCCC---------------------hHHHHHHHHHHHH
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQ-L----------KQVP---------------------KDLAQLEISNMIG 172 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~-~----------~~~~---------------------~~~~~~~~~~~l~ 172 (601)
..+||+||++.+|+.+||.||+.++.. . .+.+ ..+.+.++.++++
T Consensus 64 ---~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 140 (530)
T PRK15064 64 ---ERLGKLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLL 140 (530)
T ss_pred ---CEEEEEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 359999999999999999999987431 0 0110 0123457889999
Q ss_pred HcCCCcc-cCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHH
Q psy7365 173 DLGIPHK-RTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQM 251 (601)
Q Consensus 173 ~~gl~~~-~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 251 (601)
.+|+.+. .++++.+||||||||+++|++| +.
T Consensus 141 ~~gl~~~~~~~~~~~LSgGq~qrv~lA~aL--------------------------------------~~---------- 172 (530)
T PRK15064 141 GVGIPEEQHYGLMSEVAPGWKLRVLLAQAL--------------------------------------FS---------- 172 (530)
T ss_pred hCCCChhHhcCchhhcCHHHHHHHHHHHHH--------------------------------------hc----------
Confidence 9999864 4678999999999999854432 22
Q ss_pred HHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcC
Q psy7365 252 ALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLG 331 (601)
Q Consensus 252 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~ 331 (601)
+|++|||||||++||+.++..+.++|.+ .|.|||++|||++++..+|
T Consensus 173 -------------------------~p~lLlLDEPt~~LD~~~~~~l~~~l~~--------~~~tiiivsHd~~~~~~~~ 219 (530)
T PRK15064 173 -------------------------NPDILLLDEPTNNLDINTIRWLEDVLNE--------RNSTMIIISHDRHFLNSVC 219 (530)
T ss_pred -------------------------CCCEEEEcCCCcccCHHHHHHHHHHHHh--------CCCeEEEEeCCHHHHHhhc
Confidence 2589999999999999999999999863 3789999999999999999
Q ss_pred CEEEEecCCccc-cccCcccc-------------------------------------------------------c--c
Q psy7365 332 DRIAIIAAGKLQ-CCGSSVFL-------------------------------------------------------K--N 353 (601)
Q Consensus 332 Drv~vL~~GkIv-~~G~~~lL-------------------------------------------------------k--~ 353 (601)
|++++|++|+++ ..|..... . .
T Consensus 220 d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (530)
T PRK15064 220 THMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKAKQATSRAKQIDKIKLEEVKP 299 (530)
T ss_pred ceEEEEeCCEEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhhccccccCC
Confidence 999999999984 33311000 0 0
Q ss_pred -----cc---------cc----------cc--------------------cccccc--------------CCc------c
Q psy7365 354 -----SF---------AR----------GY--------------------YLSLDM--------------KSA------P 369 (601)
Q Consensus 354 -----~~---------g~----------g~--------------------~igld~--------------~~~------~ 369 (601)
.. ++ .| .+|.++ ... .
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~ 379 (530)
T PRK15064 300 SSRQNPFIRFEQDKKLHRNALEVENLTKGFDNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWS 379 (530)
T ss_pred ccccCceeeCCCCCCCCCceEEEEeeEEeeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC
Confidence 00 00 00 000000 000 0
Q ss_pred cccccccCCCCcc--cCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHh
Q psy7365 370 QKSYIGYCPQFDA--LNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALL 446 (601)
Q Consensus 370 ~~~~ig~v~Q~~~--l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~ 446 (601)
.++++||+||++. +++.+|+.+++.++. . . ...++++.++++.+++. +..++++.+||||||||++||+||+
T Consensus 380 ~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~-~-~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~ 454 (530)
T PRK15064 380 ENANIGYYAQDHAYDFENDLTLFDWMSQWR---Q-E-GDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMM 454 (530)
T ss_pred CceEEEEEcccccccCCCCCcHHHHHHHhc---c-C-CccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHh
Confidence 1346999999864 566799999986532 1 1 11235678899999994 6789999999999999999999999
Q ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEE-EecCHHHHHHH
Q psy7365 447 GNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSK 520 (601)
Q Consensus 447 ~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv-~~G~~~~L~~~ 520 (601)
.+|++|||||||+|||+.+++.+++.|+++ +.|||++|||++++..+|||+++|++|+++ ..|+++++.+.
T Consensus 455 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 455 QKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 999999999999999999999999999886 459999999999999999999999999998 88999888654
No 18
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.3e-57 Score=509.30 Aligned_cols=366 Identities=21% Similarity=0.233 Sum_probs=283.3
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccC
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDI 119 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~ 119 (601)
..++..++||++.|++ +..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.+++.
T Consensus 3 ~~~~l~i~~l~~~y~~---~~~il~~vs~~i~~Ge~~~iiG~NGs--GKSTL------lk~i~G~~~p~~G~i~~~~~-- 69 (556)
T PRK11819 3 AQYIYTMNRVSKVVPP---KKQILKDISLSFFPGAKIGVLGLNGA--GKSTL------LRIMAGVDKEFEGEARPAPG-- 69 (556)
T ss_pred ccEEEEEeeEEEEeCC---CCeeeeCceEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEecCC--
Confidence 3445779999999862 25699999999988 999999 57665 67999999999999999752
Q ss_pred CCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhh--------------cCCCh----------------------HHH
Q psy7365 120 RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL--------------KQVPK----------------------DLA 163 (601)
Q Consensus 120 ~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~--------------~~~~~----------------------~~~ 163 (601)
..+|||||+|.+++.+||.||+.++... .+.+. .+.
T Consensus 70 --------~~i~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (556)
T PRK11819 70 --------IKVGYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDL 141 (556)
T ss_pred --------CEEEEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccch
Confidence 3699999999999999999999875321 01110 012
Q ss_pred HHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCC
Q psy7365 164 QLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHP 243 (601)
Q Consensus 164 ~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p 243 (601)
..++.++++.+|+.. .++++.+|||||||||++||+++ .+
T Consensus 142 ~~~~~~~l~~~gl~~-~~~~~~~LSgGqkqrv~la~al~--------------------------------------~~- 181 (556)
T PRK11819 142 DSQLEIAMDALRCPP-WDAKVTKLSGGERRRVALCRLLL--------------------------------------EK- 181 (556)
T ss_pred HHHHHHHHHhCCCCc-ccCchhhcCHHHHHHHHHHHHHh--------------------------------------CC-
Confidence 456888999999964 79999999999999998654322 22
Q ss_pred cchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecc
Q psy7365 244 MNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHY 323 (601)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHd 323 (601)
|++|||||||++||+.++..+.+.|+++ +.|||++|||
T Consensus 182 ----------------------------------p~vlLLDEPt~~LD~~~~~~l~~~L~~~--------~~tviiisHd 219 (556)
T PRK11819 182 ----------------------------------PDMLLLDEPTNHLDAESVAWLEQFLHDY--------PGTVVAVTHD 219 (556)
T ss_pred ----------------------------------CCEEEEcCCCCcCChHHHHHHHHHHHhC--------CCeEEEEeCC
Confidence 5899999999999999999999999875 2499999999
Q ss_pred hhHHHhcCCEEEEecCCccc-cccCccc--------c-------------------------------------------
Q psy7365 324 MDEADLLGDRIAIIAAGKLQ-CCGSSVF--------L------------------------------------------- 351 (601)
Q Consensus 324 l~~~~~l~Drv~vL~~GkIv-~~G~~~l--------L------------------------------------------- 351 (601)
++++..+||++++|++|+++ ..|.... .
T Consensus 220 ~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (556)
T PRK11819 220 RYFLDNVAGWILELDRGRGIPWEGNYSSWLEQKAKRLAQEEKQEAARQKALKRELEWVRQSPKARQAKSKARLARYEELL 299 (556)
T ss_pred HHHHHhhcCeEEEEeCCEEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999975 2221000 0
Q ss_pred ---------------ccc--ccc----------cc--------------------cccccc--------------CCc--
Q psy7365 352 ---------------KNS--FAR----------GY--------------------YLSLDM--------------KSA-- 368 (601)
Q Consensus 352 ---------------k~~--~g~----------g~--------------------~igld~--------------~~~-- 368 (601)
... ..+ .| ++|.++ ...
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G 379 (556)
T PRK11819 300 SEEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSG 379 (556)
T ss_pred cccccccCCCceeecCCCCCCCCeEEEEEeEEEEECCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCe
Confidence 000 000 00 000000 000
Q ss_pred c--c--ccccccCCCCc-ccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCc-ccccccCcCChHHHHHHHHH
Q psy7365 369 P--Q--KSYIGYCPQFD-ALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTA 442 (601)
Q Consensus 369 ~--~--~~~ig~v~Q~~-~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~-~~~~~~~~LSgGqkQRl~lA 442 (601)
. . ..++||+||++ .+++.+|+.||+.+.....+.... ...+..+++.+++.+ ..++++.+||||||||++||
T Consensus 380 ~i~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 457 (556)
T PRK11819 380 TIKIGETVKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNR--EIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLA 457 (556)
T ss_pred EEEECCceEEEEEeCchhhcCCCCCHHHHHHhhccccccccc--HHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHH
Confidence 0 0 12589999996 688889999999876433332221 223557899999964 57999999999999999999
Q ss_pred HHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeC-CEEE-EecCHHHHHH
Q psy7365 443 IALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVN-GQFT-CLGSATHLKS 519 (601)
Q Consensus 443 ~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~-G~iv-~~G~~~~L~~ 519 (601)
+|++.+|++|||||||+|||+.+++.++++|+++ .| |||++|||++++..+|||+++|++ |++. ..|+.+++.+
T Consensus 458 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~-tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~ 533 (556)
T PRK11819 458 KTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF--PG-CAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEE 533 (556)
T ss_pred HHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CC-eEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHH
Confidence 9999999999999999999999999999999987 24 899999999999999999999986 7876 5888877644
No 19
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3e-56 Score=501.19 Aligned_cols=363 Identities=21% Similarity=0.236 Sum_probs=279.1
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..++||++.|+. +..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.+++
T Consensus 4 ~i~~~nls~~~~~---~~~il~~is~~i~~Ge~~~liG~NGs--GKSTL------l~~i~G~~~p~~G~i~~~~------ 66 (552)
T TIGR03719 4 IYTMNRVSKVVPP---KKEILKDISLSFFPGAKIGVLGLNGA--GKSTL------LRIMAGVDKEFNGEARPAP------ 66 (552)
T ss_pred EEEEeeEEEecCC---CCeeecCceEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEecC------
Confidence 4568999999861 24599999999988 999999 57665 6799999999999999875
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhh--------------cCCChHH----------------------HHHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL--------------KQVPKDL----------------------AQLE 166 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~--------------~~~~~~~----------------------~~~~ 166 (601)
+..+||+||+|.+++++||.||+.|+... .+.+..+ ...+
T Consensus 67 ----~~~i~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (552)
T TIGR03719 67 ----GIKVGYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRK 142 (552)
T ss_pred ----CCEEEEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHH
Confidence 24699999999999999999999875321 1111111 2245
Q ss_pred HHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcch
Q psy7365 167 ISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNL 246 (601)
Q Consensus 167 ~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~ 246 (601)
+.++++.+|+.. .++++.+||||||||+++|++|+ .+
T Consensus 143 ~~~~l~~~~l~~-~~~~~~~LSgGqkqrv~la~al~--------------------------------------~~---- 179 (552)
T TIGR03719 143 LEIAMDALRCPP-WDADVTKLSGGERRRVALCRLLL--------------------------------------SK---- 179 (552)
T ss_pred HHHHHhhCCCCc-ccCchhhcCHHHHHHHHHHHHHh--------------------------------------cC----
Confidence 678889999964 68899999999999998544322 22
Q ss_pred hhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhH
Q psy7365 247 THKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDE 326 (601)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~ 326 (601)
|++|||||||++||+.++..+.+.|+++ +.|||++||++++
T Consensus 180 -------------------------------p~lLLLDEPt~~LD~~~~~~l~~~L~~~--------~~tvIiisHd~~~ 220 (552)
T TIGR03719 180 -------------------------------PDMLLLDEPTNHLDAESVAWLEQHLQEY--------PGTVVAVTHDRYF 220 (552)
T ss_pred -------------------------------CCEEEEcCCCCCCChHHHHHHHHHHHhC--------CCeEEEEeCCHHH
Confidence 5899999999999999999999999864 2599999999999
Q ss_pred HHhcCCEEEEecCCccc-cccCccc--------c----------------------------------------------
Q psy7365 327 ADLLGDRIAIIAAGKLQ-CCGSSVF--------L---------------------------------------------- 351 (601)
Q Consensus 327 ~~~l~Drv~vL~~GkIv-~~G~~~l--------L---------------------------------------------- 351 (601)
+..+||++++|.+|+++ ..|.... .
T Consensus 221 ~~~~~d~v~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (552)
T TIGR03719 221 LDNVAGWILELDRGRGIPWEGNYSSWLEQKEKRLEQEEKEESARQKALKRELEWVRSSPKARQAKSKARLARYEELLSQE 300 (552)
T ss_pred HHhhcCeEEEEECCEEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhc
Confidence 99999999999999964 2221100 0
Q ss_pred ------------ccc--ccc----------cc--------------------cccccc--------------CCc--c--
Q psy7365 352 ------------KNS--FAR----------GY--------------------YLSLDM--------------KSA--P-- 369 (601)
Q Consensus 352 ------------k~~--~g~----------g~--------------------~igld~--------------~~~--~-- 369 (601)
... .++ .| .+|.++ ... .
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~ 380 (552)
T TIGR03719 301 FQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIK 380 (552)
T ss_pred ccccCCCceeecCCCCCCCCeEEEEeeEEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEE
Confidence 000 000 00 000000 000 0
Q ss_pred --cccccccCCCCc-ccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCc-ccccccCcCChHHHHHHHHHHHH
Q psy7365 370 --QKSYIGYCPQFD-ALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIAL 445 (601)
Q Consensus 370 --~~~~ig~v~Q~~-~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~-~~~~~~~~LSgGqkQRl~lA~AL 445 (601)
...++||+||++ .+++.+|+.|++.+....++.... ...+.++++.+++.+ ..++++.+|||||||||+||+||
T Consensus 381 ~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al 458 (552)
T TIGR03719 381 IGETVKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKR--EVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTL 458 (552)
T ss_pred ECCceEEEEEeCCccccCCCCcHHHHHHhhccccccCcc--hHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHH
Confidence 012589999996 488889999999876433332221 223567899999964 57899999999999999999999
Q ss_pred hCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeC-CEEE-EecCHHHHHH
Q psy7365 446 LGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVN-GQFT-CLGSATHLKS 519 (601)
Q Consensus 446 ~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~-G~iv-~~G~~~~L~~ 519 (601)
+.+|++|||||||+|||+.+++.++++|+++. | |||++|||++++..+|||+++|++ |++. ..|+.++..+
T Consensus 459 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 459 KSGGNVLLLDEPTNDLDVETLRALEEALLEFA--G-CAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC--C-eEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 99999999999999999999999999999872 4 899999999999999999999987 5776 6788776654
No 20
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.7e-55 Score=492.31 Aligned_cols=355 Identities=21% Similarity=0.276 Sum_probs=271.1
Q ss_pred cccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEE-----------Ec
Q psy7365 53 ESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAK-----------IY 115 (601)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~-----------~~ 115 (601)
++++++||.. ..+|++++ .+.+ +||||+ ||||| .++|+|+++|++|+|. ++
T Consensus 77 ~~~~~~yg~~---~~~L~~l~-~i~~Gev~gLvG~NGa--GKSTL------lkiL~G~l~p~~G~i~~~~~~~~~~~~~~ 144 (590)
T PRK13409 77 EEPVHRYGVN---GFKLYGLP-IPKEGKVTGILGPNGI--GKTTA------VKILSGELIPNLGDYEEEPSWDEVLKRFR 144 (590)
T ss_pred cCceEEecCC---ceeEecCC-cCCCCCEEEEECCCCC--CHHHH------HHHHhCCccCCCccccCCCcHHHHHHHhC
Confidence 3478888631 24899999 7766 999999 56665 5799999999999998 89
Q ss_pred cccCCCchHHh---cccEEEEccCCCCCCC---CCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCCh
Q psy7365 116 DHDIRTDMTTI---RRSLGVCPQYNALFDK---LTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSG 189 (601)
Q Consensus 116 g~~~~~~~~~~---~~~ig~v~Q~~~~~~~---~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSg 189 (601)
|.++....... +..+++.+|...+++. .||.|++.+. ..+.+++++++.+||.+..++.+.+|||
T Consensus 145 G~~l~~~~~~~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~---------~~~~~~~~~l~~l~l~~~~~~~~~~LSg 215 (590)
T PRK13409 145 GTELQNYFKKLYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKV---------DERGKLDEVVERLGLENILDRDISELSG 215 (590)
T ss_pred ChHHHHHHHHHhccCcceeecccchhhhhhhhcchHHHHHHhh---------hHHHHHHHHHHHcCCchhhcCChhhCCH
Confidence 98875422221 2346777776544433 3999998642 2345788999999999999999999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||++||+||+ .+
T Consensus 216 Ge~qrv~ia~al~--------------------------------------~~--------------------------- 230 (590)
T PRK13409 216 GELQRVAIAAALL--------------------------------------RD--------------------------- 230 (590)
T ss_pred HHHHHHHHHHHHh--------------------------------------cC---------------------------
Confidence 9999998644322 22
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCC--c---ccc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAG--K---LQC 344 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~G--k---Iv~ 344 (601)
|++|||||||++||+.++..++++|+++ .. |+|||++|||++++..+||++++|.++ . +..
T Consensus 231 --------p~lllLDEPts~LD~~~~~~l~~~i~~l-----~~-g~tvIivsHd~~~l~~~~D~v~vl~~~~g~~g~~~~ 296 (590)
T PRK13409 231 --------ADFYFFDEPTSYLDIRQRLNVARLIREL-----AE-GKYVLVVEHDLAVLDYLADNVHIAYGEPGAYGVVSK 296 (590)
T ss_pred --------CCEEEEECCCCCCCHHHHHHHHHHHHHH-----HC-CCEEEEEeCCHHHHHHhCCEEEEEeCCccccceecc
Confidence 5899999999999999999999999997 24 899999999999999999999999652 1 110
Q ss_pred c------------c--C---------ccccc---c-----------------ccc------------cccc---ccccc-
Q psy7365 345 C------------G--S---------SVFLK---N-----------------SFA------------RGYY---LSLDM- 365 (601)
Q Consensus 345 ~------------G--~---------~~lLk---~-----------------~~g------------~g~~---igld~- 365 (601)
. + . +...+ . .++ .|.. +|.++
T Consensus 297 ~~~~~~~i~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ls~~~~~~~l~~~s~~i~~Geiv~l~G~NGs 376 (590)
T PRK13409 297 PKGVRVGINEYLKGYLPEENMRIRPEPIEFEERPPRDESERETLVEYPDLTKKLGDFSLEVEGGEIYEGEVIGIVGPNGI 376 (590)
T ss_pred hhHHHHhHHHHHHhcchhhhhhccccCcceecCCCccccCCceEEEEcceEEEECCEEEEecceEECCCCEEEEECCCCC
Confidence 0 0 0 00000 0 000 0000 00000
Q ss_pred -------------CCc--c--cccccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCccccccc
Q psy7365 366 -------------KSA--P--QKSYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREV 428 (601)
Q Consensus 366 -------------~~~--~--~~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~ 428 (601)
... . ...++||+||++.+++.+||+|++.+....++ . ...+.++++.++|.+..++++
T Consensus 377 GKSTLlk~L~Gl~~p~~G~I~~~~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~~--~---~~~~~~~L~~l~l~~~~~~~~ 451 (590)
T PRK13409 377 GKTTFAKLLAGVLKPDEGEVDPELKISYKPQYIKPDYDGTVEDLLRSITDDLG--S---SYYKSEIIKPLQLERLLDKNV 451 (590)
T ss_pred CHHHHHHHHhCCCCCCceEEEEeeeEEEecccccCCCCCcHHHHHHHHhhhcC--h---HHHHHHHHHHCCCHHHHhCCc
Confidence 000 0 01358999999888889999999987532221 1 234678999999998899999
Q ss_pred CcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCE
Q psy7365 429 RTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQ 507 (601)
Q Consensus 429 ~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~ 507 (601)
.+|||||||||+||+||+.+|++|||||||+|||+.++..++++|++++++ |+|||++|||++++..+|||+++|++ +
T Consensus 452 ~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~ 530 (590)
T PRK13409 452 KDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-E 530 (590)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-c
Confidence 999999999999999999999999999999999999999999999999764 89999999999999999999999964 7
Q ss_pred EEEecC
Q psy7365 508 FTCLGS 513 (601)
Q Consensus 508 iv~~G~ 513 (601)
+...|+
T Consensus 531 ~~~~g~ 536 (590)
T PRK13409 531 PGKHGH 536 (590)
T ss_pred ceeeee
Confidence 776665
No 21
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-53 Score=484.38 Aligned_cols=357 Identities=21% Similarity=0.286 Sum_probs=269.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
+.++||++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|..
T Consensus 2 i~i~nls~~~g~----~~~l~~vs~~i~~Ge~v~LvG~NGs--GKSTL------LkiL~G~~~pd~G~I~~~~~~----- 64 (638)
T PRK10636 2 IVFSSLQIRRGV----RVLLDNATATINPGQKVGLVGKNGC--GKSTL------LALLKNEISADGGSYTFPGNW----- 64 (638)
T ss_pred EEEEEEEEEeCC----ceeecCcEEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEecCCC-----
Confidence 348999999965 3499999999988 999999 57665 679999999999999998742
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHh-----------------------HhhcC----CChHHHHHHHHHHHHHcCC
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFY-----------------------SQLKQ----VPKDLAQLEISNMIGDLGI 176 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~-----------------------~~~~~----~~~~~~~~~~~~~l~~~gl 176 (601)
.+||++|++..+ ..++.+++.-. ....+ .+....+.++.++++.+|+
T Consensus 65 -----~i~~~~q~~~~~-~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl 138 (638)
T PRK10636 65 -----QLAWVNQETPAL-PQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGF 138 (638)
T ss_pred -----EEEEEecCCCCC-CCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCC
Confidence 378888865333 24555544210 00000 1112345678899999999
Q ss_pred C-cccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHH
Q psy7365 177 P-HKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALET 255 (601)
Q Consensus 177 ~-~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (601)
. +..++++.+|||||||||++|++|+ .+
T Consensus 139 ~~~~~~~~~~~LSgGerqRv~LA~aL~--------------------------------------~~------------- 167 (638)
T PRK10636 139 SNEQLERPVSDFSGGWRMRLNLAQALI--------------------------------------CR------------- 167 (638)
T ss_pred CchhhcCchhhcCHHHHHHHHHHHHHc--------------------------------------cC-------------
Confidence 7 5789999999999999998654332 22
Q ss_pred HhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEE
Q psy7365 256 LKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIA 335 (601)
Q Consensus 256 ~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~ 335 (601)
|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+++
T Consensus 168 ----------------------P~lLLLDEPtn~LD~~~~~~L~~~L~~~--------~~tviivsHd~~~l~~~~d~i~ 217 (638)
T PRK10636 168 ----------------------SDLLLLDEPTNHLDLDAVIWLEKWLKSY--------QGTLILISHDRDFLDPIVDKII 217 (638)
T ss_pred ----------------------CCEEEEcCCCCcCCHHHHHHHHHHHHhC--------CCeEEEEeCCHHHHHHhcCEEE
Confidence 5899999999999999999999998764 4699999999999999999999
Q ss_pred EecCCccccc-cCcc-----------------------------c--------------------------ccc-----c
Q psy7365 336 IIAAGKLQCC-GSSV-----------------------------F--------------------------LKN-----S 354 (601)
Q Consensus 336 vL~~GkIv~~-G~~~-----------------------------l--------------------------Lk~-----~ 354 (601)
+|.+|++... |... . ... .
T Consensus 218 ~L~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~a~~~~~a~~r~~~l~~~~~~~~~~~~~~ 297 (638)
T PRK10636 218 HIEQQSLFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNP 297 (638)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhcccccccCCc
Confidence 9999998421 1000 0 000 0
Q ss_pred --------c--cc----------cc--------------------cccccc--------------CCc--c----ccccc
Q psy7365 355 --------F--AR----------GY--------------------YLSLDM--------------KSA--P----QKSYI 374 (601)
Q Consensus 355 --------~--g~----------g~--------------------~igld~--------------~~~--~----~~~~i 374 (601)
. ++ .| ++|.++ ... . ...++
T Consensus 298 ~~~~~~~~~~~~~~~l~~~~l~~~y~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~i 377 (638)
T PRK10636 298 FHFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKL 377 (638)
T ss_pred eeEecCCCccCCCceEEEEeeEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCCEEE
Confidence 0 00 00 000000 000 0 01358
Q ss_pred ccCCCCc--ccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCE
Q psy7365 375 GYCPQFD--ALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPL 451 (601)
Q Consensus 375 g~v~Q~~--~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~l 451 (601)
||++|+. .+.+..|+.+++... . .......+.++|+.+++. +..++++++|||||||||+||++|+.+|++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~---~---~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~l 451 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARL---A---PQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNL 451 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHh---C---chhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999974 345566777765321 1 122345688999999996 468899999999999999999999999999
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEE-EecCHHHHHH
Q psy7365 452 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKS 519 (601)
Q Consensus 452 LlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv-~~G~~~~L~~ 519 (601)
|||||||+|||+.++..+.++|+++ .| |||++|||++++..+|||+++|++|+++ +.|++++..+
T Consensus 452 LlLDEPt~~LD~~~~~~l~~~L~~~--~g-tvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 452 LLLDEPTNHLDLDMRQALTEALIDF--EG-ALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHHc--CC-eEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 9999999999999999999999987 34 9999999999999999999999999997 8999988743
No 22
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=5e-52 Score=473.85 Aligned_cols=359 Identities=20% Similarity=0.208 Sum_probs=267.8
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..+++|++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|..
T Consensus 3 ~l~i~~ls~~~~~----~~il~~is~~i~~Ge~v~LvG~NGs--GKSTL------LriiaG~~~p~~G~I~~~~~~---- 66 (635)
T PRK11147 3 LISIHGAWLSFSD----APLLDNAELHIEDNERVCLVGRNGA--GKSTL------MKILNGEVLLDDGRIIYEQDL---- 66 (635)
T ss_pred EEEEeeEEEEeCC----ceeEeCcEEEECCCCEEEEECCCCC--CHHHH------HHHHcCCCCCCCeEEEeCCCC----
Confidence 3558999999864 4599999999988 999999 57665 679999999999999998732
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHH------------------------------HHhHhhc----CCChHHHHHHHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHM------------------------------WFYSQLK----QVPKDLAQLEIS 168 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l------------------------------~~~~~~~----~~~~~~~~~~~~ 168 (601)
.+++++|.+......++.+++ .++.... ..+....+.++.
T Consensus 67 ------~~~~l~q~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (635)
T PRK11147 67 ------IVARLQQDPPRNVEGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRIN 140 (635)
T ss_pred ------EEEEeccCCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 256677665322234444443 2111110 011112456788
Q ss_pred HHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhh
Q psy7365 169 NMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTH 248 (601)
Q Consensus 169 ~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~ 248 (601)
++++.+|+. .++++.+|||||||||++||+|+ .+
T Consensus 141 ~~l~~lgl~--~~~~~~~LSgGekqRv~LAraL~--------------------------------------~~------ 174 (635)
T PRK11147 141 EVLAQLGLD--PDAALSSLSGGWLRKAALGRALV--------------------------------------SN------ 174 (635)
T ss_pred HHHHhCCCC--CCCchhhcCHHHHHHHHHHHHHh--------------------------------------cC------
Confidence 999999997 38899999999999998654332 22
Q ss_pred HHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHH
Q psy7365 249 KQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEAD 328 (601)
Q Consensus 249 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~ 328 (601)
|++|||||||++||+.++.++.+.|+++ +.|||++|||.+++.
T Consensus 175 -----------------------------P~lLLLDEPt~~LD~~~~~~L~~~L~~~--------~~tvlivsHd~~~l~ 217 (635)
T PRK11147 175 -----------------------------PDVLLLDEPTNHLDIETIEWLEGFLKTF--------QGSIIFISHDRSFIR 217 (635)
T ss_pred -----------------------------CCEEEEcCCCCccCHHHHHHHHHHHHhC--------CCEEEEEeCCHHHHH
Confidence 5899999999999999999999999875 249999999999999
Q ss_pred hcCCEEEEecCCccccc-cCccc--------------------------------------------------cc-----
Q psy7365 329 LLGDRIAIIAAGKLQCC-GSSVF--------------------------------------------------LK----- 352 (601)
Q Consensus 329 ~l~Drv~vL~~GkIv~~-G~~~l--------------------------------------------------Lk----- 352 (601)
.+||++++|.+|+++.. |.... +.
T Consensus 218 ~~~d~i~~L~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~~~~ 297 (635)
T PRK11147 218 NMATRIVDLDRGKLVSYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKALRRERSE 297 (635)
T ss_pred HhcCeEEEEECCEEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhhhhcc
Confidence 99999999999998632 21000 00
Q ss_pred c---------------cccc----------cc--------------------cccccc--------------CCc-----
Q psy7365 353 N---------------SFAR----------GY--------------------YLSLDM--------------KSA----- 368 (601)
Q Consensus 353 ~---------------~~g~----------g~--------------------~igld~--------------~~~----- 368 (601)
. ..++ .| ++|.++ ...
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~ 377 (635)
T PRK11147 298 RREVMGTAKMQVEEASRSGKIVFEMENVNYQIDGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIH 377 (635)
T ss_pred ccccCCceeEEeCCCCCCCCceEEEeeeEEEECCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEE
Confidence 0 0000 00 000000 000
Q ss_pred -ccccccccCCCCc-ccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHH
Q psy7365 369 -PQKSYIGYCPQFD-ALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIAL 445 (601)
Q Consensus 369 -~~~~~ig~v~Q~~-~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL 445 (601)
...-++||++|++ .+++.+||.||+.+........ .....+.++++.+++. +..++++++|||||||||+||++|
T Consensus 378 ~~~~~~i~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al 455 (635)
T PRK11147 378 CGTKLEVAYFDQHRAELDPEKTVMDNLAEGKQEVMVN--GRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLF 455 (635)
T ss_pred ECCCcEEEEEeCcccccCCCCCHHHHHHhhccccccc--chHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHH
Confidence 0012589999985 5888999999998743211111 1234578899999996 567899999999999999999999
Q ss_pred hCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEe-CCEEEE-ecCHHHH
Q psy7365 446 LGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV-NGQFTC-LGSATHL 517 (601)
Q Consensus 446 ~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~-~G~iv~-~G~~~~L 517 (601)
+.+|++|||||||+|||+.++..+.++|+++ +.|||++|||++++..+|||+++|+ +|++.. .|+.++-
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y 526 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDA 526 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHH
Confidence 9999999999999999999999999999886 4599999999999999999999998 799864 6777665
No 23
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.9e-50 Score=462.09 Aligned_cols=370 Identities=19% Similarity=0.208 Sum_probs=266.1
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCC---CCCeeEEEEccc
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGML---PVSSGTAKIYDH 117 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~---~~~~G~v~~~g~ 117 (601)
...+.++|+++.|++ ...++|+||++.+ +||||| ||||| .++|+|.. .|++|+|.+.+.
T Consensus 175 ~~~I~i~nls~~y~~----~~ll~~isl~i~~Ge~~gLvG~NGs--GKSTL------Lr~l~g~~~~g~p~~g~I~~~~Q 242 (718)
T PLN03073 175 IKDIHMENFSISVGG----RDLIVDASVTLAFGRHYGLVGRNGT--GKTTF------LRYMAMHAIDGIPKNCQILHVEQ 242 (718)
T ss_pred ceeEEEceEEEEeCC----CEEEECCEEEECCCCEEEEECCCCC--CHHHH------HHHHcCCCCCCCCCCCEEEEEec
Confidence 455679999999963 3499999999988 999999 57665 67999864 588999986554
Q ss_pred cCCCc------------h---HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCCh-------------------HHH
Q psy7365 118 DIRTD------------M---TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPK-------------------DLA 163 (601)
Q Consensus 118 ~~~~~------------~---~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~-------------------~~~ 163 (601)
.+... . ...+..+++++|++.+... ++.++. +.....+.++ ..+
T Consensus 243 ~~~g~~~t~~~~v~~~~~~~~~~~~~~~~~~~q~~~l~~~-~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 320 (718)
T PLN03073 243 EVVGDDTTALQCVLNTDIERTQLLEEEAQLVAQQRELEFE-TETGKG-KGANKDGVDKDAVSQRLEEIYKRLELIDAYTA 320 (718)
T ss_pred cCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhc-cccccc-ccccccccchHHHHHHHHHHHHHHHhcCcchH
Confidence 32110 0 1123447889988753221 222221 1111122222 234
Q ss_pred HHHHHHHHHHcCCC-cccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcC
Q psy7365 164 QLEISNMIGDLGIP-HKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINH 242 (601)
Q Consensus 164 ~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 242 (601)
.+++.++++.+|+. +..++++.+||||||||++||++|+ .+
T Consensus 321 ~~r~~~~L~~lgl~~~~~~~~~~~LSgG~k~rv~LA~aL~--------------------------------------~~ 362 (718)
T PLN03073 321 EARAASILAGLSFTPEMQVKATKTFSGGWRMRIALARALF--------------------------------------IE 362 (718)
T ss_pred HHHHHHHHHHCCCChHHHhCchhhCCHHHHHHHHHHHHHh--------------------------------------cC
Confidence 56778888899986 5578999999999999998654332 22
Q ss_pred CcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEec
Q psy7365 243 PMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTH 322 (601)
Q Consensus 243 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tH 322 (601)
|++|||||||++||+.++.++.+.|+++ |.|+|++||
T Consensus 363 -----------------------------------p~lLlLDEPt~~LD~~~~~~l~~~L~~~--------~~tviivsH 399 (718)
T PLN03073 363 -----------------------------------PDLLLLDEPTNHLDLHAVLWLETYLLKW--------PKTFIVVSH 399 (718)
T ss_pred -----------------------------------CCEEEEECCCCCCCHHHHHHHHHHHHHc--------CCEEEEEEC
Confidence 5899999999999999999999999864 679999999
Q ss_pred chhHHHhcCCEEEEecCCcccc-ccCcc----------------------------------------------------
Q psy7365 323 YMDEADLLGDRIAIIAAGKLQC-CGSSV---------------------------------------------------- 349 (601)
Q Consensus 323 dl~~~~~l~Drv~vL~~GkIv~-~G~~~---------------------------------------------------- 349 (601)
|++++..+||++++|.+|++.. .|...
T Consensus 400 d~~~l~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~e~~~k~~~~l~~~i~~~~~~a~~~~~~~s~~k~l~ 479 (718)
T PLN03073 400 AREFLNTVVTDILHLHGQKLVTYKGDYDTFERTREEQLKNQQKAFESNERSRSHMQAFIDKFRYNAKRASLVQSRIKALD 479 (718)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHhhcchHHH
Confidence 9999999999999999999852 11100
Q ss_pred ----------------cccc-c--ccc----------cc-----c----------------ccccc--------------
Q psy7365 350 ----------------FLKN-S--FAR----------GY-----Y----------------LSLDM-------------- 365 (601)
Q Consensus 350 ----------------lLk~-~--~g~----------g~-----~----------------igld~-------------- 365 (601)
.... . .+. .| . +|.++
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ls~~y~~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll 559 (718)
T PLN03073 480 RLGHVDAVVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGEL 559 (718)
T ss_pred HHhhhhccccCCCceeecCCCccCCCCceEEEEeeEEEeCCCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCC
Confidence 0000 0 000 00 0 00000
Q ss_pred CCc------ccccccccCCCCcccCCCCCHHHHHHHh-HHhc-CCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHH
Q psy7365 366 KSA------PQKSYIGYCPQFDALNDRLTPREHLEFY-SRVR-NLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNK 436 (601)
Q Consensus 366 ~~~------~~~~~ig~v~Q~~~l~~~lTv~E~L~~~-~~~~-g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqk 436 (601)
... ..+.++||++|++ ++.+++.++..+. ...+ +. ..+++.++|+.+++. +..++++.+||||||
T Consensus 560 ~p~~G~I~~~~~~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~~~----~~~~i~~~L~~~gl~~~~~~~~~~~LSgGqk 633 (718)
T PLN03073 560 QPSSGTVFRSAKVRMAVFSQHH--VDGLDLSSNPLLYMMRCFPGV----PEQKLRAHLGSFGVTGNLALQPMYTLSGGQK 633 (718)
T ss_pred CCCCceEEECCceeEEEEeccc--cccCCcchhHHHHHHHhcCCC----CHHHHHHHHHHCCCChHHhcCCccccCHHHH
Confidence 000 0124689999985 2345565554322 1211 21 135678899999997 467899999999999
Q ss_pred HHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEE-EecCHH
Q psy7365 437 RKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSAT 515 (601)
Q Consensus 437 QRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv-~~G~~~ 515 (601)
|||+||+||+.+|++|||||||+|||+.++..+.+.|.++ +| |||++|||++++..+|||+++|++|+++ ..|+++
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~g-tvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~ 710 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--QG-GVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFH 710 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CC-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHH
Confidence 9999999999999999999999999999999998888765 34 9999999999999999999999999998 789888
Q ss_pred HHHHH
Q psy7365 516 HLKSK 520 (601)
Q Consensus 516 ~L~~~ 520 (601)
+.++.
T Consensus 711 ~~~~~ 715 (718)
T PLN03073 711 DYKKT 715 (718)
T ss_pred HHHHH
Confidence 76543
No 24
>KOG0055|consensus
Probab=100.00 E-value=8.2e-49 Score=453.95 Aligned_cols=205 Identities=26% Similarity=0.351 Sum_probs=161.6
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
-++++|+.++|.... +...++|+||.+++ +||||| |||| + .++|.+++.|++|+|.+||.|+.+
T Consensus 350 ~ief~nV~FsYPsRp-dv~Il~g~sl~i~~G~~valVG~SGs--GKST-----~-i~LL~RfydP~~G~V~idG~di~~~ 420 (1228)
T KOG0055|consen 350 EIEFRNVCFSYPSRP-DVKILKGVSLKIPSGQTVALVGPSGS--GKST-----L-IQLLARFYDPTSGEVLIDGEDIRNL 420 (1228)
T ss_pred ceEEEEEEecCCCCC-cchhhCCeEEEeCCCCEEEEECCCCC--CHHH-----H-HHHHHHhcCCCCceEEEcCccchhc
Confidence 356999999975544 68899999999988 999999 5554 4 579999999999999999999976
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHH-----HHHHHHHc--CCCcccCCccccCChHHHhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLE-----ISNMIGDL--GIPHKRTSLANTLSGGMQRK 194 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LSgG~~qr 194 (601)
+...+|..||+|+|+|.+| ..|++||+.|+.+. ...+++.+. +.+.+..+ |.+-.....--+||||||||
T Consensus 421 ~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~~d--at~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQR 497 (1228)
T KOG0055|consen 421 NLKWLRSQIGLVSQEPVLF-ATTIRENIRYGKPD--ATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQR 497 (1228)
T ss_pred chHHHHhhcCeeeechhhh-cccHHHHHhcCCCc--ccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHH
Confidence 4566888999999999666 78999999887543 222322221 12222222 23333444556699999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
+|||||++.|
T Consensus 498 IAIARalv~~---------------------------------------------------------------------- 507 (1228)
T KOG0055|consen 498 IAIARALVRN---------------------------------------------------------------------- 507 (1228)
T ss_pred HHHHHHHHhC----------------------------------------------------------------------
Confidence 9876554333
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|++|+||||||+||+.+.+.+.+.|.++ ..|+|.|+++|+++.+.. +|++++|.+|+|+..
T Consensus 508 ---P~ILLLDEaTSaLD~~se~~Vq~ALd~~------~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE~ 568 (1228)
T KOG0055|consen 508 ---PKILLLDEATSALDAESERVVQEALDKA------SKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVEQ 568 (1228)
T ss_pred ---CCEEEecCcccccCHHHHHHHHHHHHHh------hcCCeEEEEeeehhhhhc-cCEEEEEECCEEEEe
Confidence 5899999999999999999999999886 368999999999999987 999999999998653
No 25
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-49 Score=380.27 Aligned_cols=211 Identities=27% Similarity=0.399 Sum_probs=188.6
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
++.++||+|.||+.. +|+|+||+|.+ +||||+ ||||| .|||+||.+|++|+|.++|.++..
T Consensus 2 mi~i~~l~K~fg~~~----VLkgi~l~v~~Gevv~iiGpSGS--GKSTl------LRclN~LE~~~~G~I~i~g~~~~~~ 69 (240)
T COG1126 2 MIEIKNLSKSFGDKE----VLKGISLSVEKGEVVVIIGPSGS--GKSTL------LRCLNGLEEPDSGSITVDGEDVGDK 69 (240)
T ss_pred eEEEEeeeEEeCCeE----EecCcceeEcCCCEEEEECCCCC--CHHHH------HHHHHCCcCCCCceEEECCEeccch
Confidence 356899999998655 99999999988 999999 56655 579999999999999999987743
Q ss_pred -chHHhcccEEEEccCCCCCCCCCHHHHHHHhH-hhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 122 -DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYS-QLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 122 -~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
+...+|+++|+|||++.|||++||.||+.++. ...+.+++++++++.++|+++||.++.+.+|.+|||||||||+|||
T Consensus 70 ~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIAR 149 (240)
T COG1126 70 KDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIAR 149 (240)
T ss_pred hhHHHHHHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHH
Confidence 45678999999999999999999999999866 4678999999999999999999999999999999999999998654
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
|| +. .|+
T Consensus 150 AL--------------------------------------aM-----------------------------------~P~ 156 (240)
T COG1126 150 AL--------------------------------------AM-----------------------------------DPK 156 (240)
T ss_pred HH--------------------------------------cC-----------------------------------CCC
Confidence 32 12 269
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
++++|||||+|||....++.+.++++ +.+|.|.+++||+|.|+.+.+|||++|++|+++..+++.
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~L-----A~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~ 221 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDL-----AEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPE 221 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHH-----HHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHH
Confidence 99999999999999999999999998 457999999999999999999999999999999888653
No 26
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.5e-47 Score=421.83 Aligned_cols=358 Identities=24% Similarity=0.259 Sum_probs=278.4
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
.++.+.+|++.|+ +...++|+||++.+ +|+||| ||||| +++|+|.+.|++|+|...+.
T Consensus 2 ~~i~~~~ls~~~g----~~~l~~~~~l~~~~G~riGLvG~NGa--GKSTL------LkilaG~~~~~~G~i~~~~~---- 65 (530)
T COG0488 2 SMITLENLSLAYG----DRPLLENVSLTLNPGERIGLVGRNGA--GKSTL------LKILAGELEPDSGEVTRPKG---- 65 (530)
T ss_pred ceEEEeeeEEeeC----CceeecCCcceeCCCCEEEEECCCCC--CHHHH------HHHHcCCCcCCCCeEeecCC----
Confidence 3455889999985 44599999999988 999999 57665 68999999999999987642
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhh-cC-----------------------------CChHHHHHHHHHHH
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL-KQ-----------------------------VPKDLAQLEISNMI 171 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~-~~-----------------------------~~~~~~~~~~~~~l 171 (601)
-++||++|++..++..||.+.+.-+..- .. ++.-..+.++..++
T Consensus 66 ------~~v~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L 139 (530)
T COG0488 66 ------LRVGYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEAL 139 (530)
T ss_pred ------ceEEEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHH
Confidence 2599999999999999999988653210 00 11112346788999
Q ss_pred HHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHH
Q psy7365 172 GDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQM 251 (601)
Q Consensus 172 ~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 251 (601)
..+|++.. ++++++||||||.||++||+|+.+
T Consensus 140 ~gLg~~~~-~~~~~~LSGG~r~Rv~LA~aL~~~----------------------------------------------- 171 (530)
T COG0488 140 LGLGFPDE-DRPVSSLSGGWRRRVALARALLEE----------------------------------------------- 171 (530)
T ss_pred hcCCCCcc-cCchhhcCHHHHHHHHHHHHHhcC-----------------------------------------------
Confidence 99999988 999999999999999876654433
Q ss_pred HHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcC
Q psy7365 252 ALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLG 331 (601)
Q Consensus 252 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~ 331 (601)
|++|+|||||++||..+..++-+.|.+. .| |+|+||||-+|+...|
T Consensus 172 --------------------------pDlLLLDEPTNHLD~~~i~WLe~~L~~~-------~g-tviiVSHDR~FLd~V~ 217 (530)
T COG0488 172 --------------------------PDLLLLDEPTNHLDLESIEWLEDYLKRY-------PG-TVIVVSHDRYFLDNVA 217 (530)
T ss_pred --------------------------CCEEEEcCCCcccCHHHHHHHHHHHHhC-------CC-cEEEEeCCHHHHHHHh
Confidence 6999999999999999999999999864 57 9999999999999999
Q ss_pred CEEEEecCCccccccCcc--------------------------------------------------------------
Q psy7365 332 DRIAIIAAGKLQCCGSSV-------------------------------------------------------------- 349 (601)
Q Consensus 332 Drv~vL~~GkIv~~G~~~-------------------------------------------------------------- 349 (601)
++|+-++.|++.......
T Consensus 218 t~I~~ld~g~l~~y~Gny~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~k~a~sr~k~l~k~~~~~~~~ 297 (530)
T COG0488 218 THILELDRGKLTPYKGNYSSYLEQKAERLRQEAAAYEKQQKELAKEQEWIRRGKAAASKAKKAKSRIKRLEKLEARLAEE 297 (530)
T ss_pred hheEEecCCceeEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhhhhc
Confidence 999999999875432100
Q ss_pred -----------ccccc---ccc----------cc---------------------ccccccC--------------C---
Q psy7365 350 -----------FLKNS---FAR----------GY---------------------YLSLDMK--------------S--- 367 (601)
Q Consensus 350 -----------lLk~~---~g~----------g~---------------------~igld~~--------------~--- 367 (601)
.+... .++ +| ++|-++. .
T Consensus 298 ~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G 377 (530)
T COG0488 298 RPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGGRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSG 377 (530)
T ss_pred ccccccccceeeccCCcccCCCeeEEEeccccccCCCceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCc
Confidence 00000 000 00 0000000 0
Q ss_pred ---cccccccccCCCCcc-cCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHH
Q psy7365 368 ---APQKSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTA 442 (601)
Q Consensus 368 ---~~~~~~ig~v~Q~~~-l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA 442 (601)
....-++||.+|+.. +.+..|+.|++.-... . ..+..+...|.+|++. +...++++.||||||.||.+|
T Consensus 378 ~v~~g~~v~igyf~Q~~~~l~~~~t~~d~l~~~~~-----~-~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La 451 (530)
T COG0488 378 TVKVGETVKIGYFDQHRDELDPDKTVLEELSEGFP-----D-GDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLA 451 (530)
T ss_pred eEEeCCceEEEEEEehhhhcCccCcHHHHHHhhCc-----c-ccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHH
Confidence 001235899999874 4577799998864321 1 1146688999999996 566889999999999999999
Q ss_pred HHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEE-ecCHHHHHH
Q psy7365 443 IALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTC-LGSATHLKS 519 (601)
Q Consensus 443 ~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~-~G~~~~L~~ 519 (601)
+.++.+|.+|||||||+.||..++..+-+.|.++ ..|||+||||..++..+|++++.+.+ ++.. .|+.++..+
T Consensus 452 ~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f---~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~ 525 (530)
T COG0488 452 KLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF---EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLE 525 (530)
T ss_pred HHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC---CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHH
Confidence 9999999999999999999999999999999887 46999999999999999999999998 5544 477766544
No 27
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-48 Score=384.73 Aligned_cols=212 Identities=27% Similarity=0.408 Sum_probs=191.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.|+|+||+|++ ..+++|+||++++ +||||| |||| + +|||++++.|++|+|+++|+++.+ +
T Consensus 2 I~~~nvsk~y~~----~~av~~v~l~I~~gef~vliGpSGs--GKTT-----t-LkMINrLiept~G~I~i~g~~i~~~d 69 (309)
T COG1125 2 IEFENVSKRYGN----KKAVDDVNLTIEEGEFLVLIGPSGS--GKTT-----T-LKMINRLIEPTSGEILIDGEDISDLD 69 (309)
T ss_pred ceeeeeehhcCC----ceeeeeeeEEecCCeEEEEECCCCC--cHHH-----H-HHHHhcccCCCCceEEECCeecccCC
Confidence 568999999984 4599999999988 999999 5654 4 579999999999999999999975 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc--ccCCccccCChHHHhhhhchhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH--KRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~--~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
..++|++||||-|...|||++||.||+++...+.|.+++++++|++|+++.+||++ +.+|+|++|||||||||.+|||
T Consensus 70 ~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RA 149 (309)
T COG1125 70 PVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARA 149 (309)
T ss_pred HHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999974 7999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 150 L--------------------------------------Aad-----------------------------------P~i 156 (309)
T COG1125 150 L--------------------------------------AAD-----------------------------------PPI 156 (309)
T ss_pred H--------------------------------------hcC-----------------------------------CCe
Confidence 2 222 579
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
++||||+++|||.+|..+.+.++++. +.-|+|||++|||++|+..++|||++|++|+++-.+++..
T Consensus 157 lLMDEPFgALDpI~R~~lQ~e~~~lq----~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~ 222 (309)
T COG1125 157 LLMDEPFGALDPITRKQLQEEIKELQ----KELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDE 222 (309)
T ss_pred EeecCCccccChhhHHHHHHHHHHHH----HHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHH
Confidence 99999999999999999999999984 4569999999999999999999999999999998887643
No 28
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4e-46 Score=454.39 Aligned_cols=143 Identities=25% Similarity=0.387 Sum_probs=128.5
Q ss_pred ccccCCCCcccCCCCCHHHHHHHhHHhcC---CChhHHHHHHHHHHHHcCCCcccccccC----cCChHHHHHHHHHHHH
Q psy7365 373 YIGYCPQFDALNDRLTPREHLEFYSRVRN---LPSVLLNTIVNESLNKFALGHYSDREVR----TLSGGNKRKLSTAIAL 445 (601)
Q Consensus 373 ~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g---~~~~~~~~~~~~lLe~~~L~~~~~~~~~----~LSgGqkQRl~lA~AL 445 (601)
.+||++|++.+++.+||+|++.|.+.++. .+..+..++++++++.++|.+.+|+.++ .|||||||||+||++|
T Consensus 837 ~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~~LSgGqrqRl~Ia~aL 916 (1394)
T TIGR00956 837 SIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGEGLNVEQRKRLTIGVEL 916 (1394)
T ss_pred ceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCCCCCHHHhhHHHHHHHH
Confidence 47899999888999999999999876652 2334455678999999999999999887 7999999999999999
Q ss_pred hCCCC-EEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhH-HHhhCCEEEEEeCC-EEEEecCHH
Q psy7365 446 LGNTP-LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEE-CEALCTKLTIMVNG-QFTCLGSAT 515 (601)
Q Consensus 446 ~~~P~-lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e-~~~l~drv~iL~~G-~iv~~G~~~ 515 (601)
+.+|+ +|+|||||+|||+.++..+++.|++++++|+|||++||+++. +...|||+++|++| ++++.|++.
T Consensus 917 ~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 917 VAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 99997 999999999999999999999999998889999999999997 45789999999997 999999973
No 29
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-47 Score=381.57 Aligned_cols=198 Identities=25% Similarity=0.374 Sum_probs=178.9
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..++++++.|++ ..+++|+||+|.+ +||||| ||||| .|+|+|+.+|++|+|.++|.++..+
T Consensus 4 l~i~~v~~~f~~----~~vl~~i~L~v~~GEfvsilGpSGc--GKSTL------LriiAGL~~p~~G~V~~~g~~v~~p- 70 (248)
T COG1116 4 LEIEGVSKSFGG----VEVLEDINLSVEKGEFVAILGPSGC--GKSTL------LRLIAGLEKPTSGEVLLDGRPVTGP- 70 (248)
T ss_pred EEEEeeEEEeCc----eEEeccceeEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCcccCCC-
Confidence 348899999987 5699999999988 999999 56665 6799999999999999999998443
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
...+|||||++.+|||+||.||+.|+....+.++.+.++++.++|+.+||.++.+++|++|||||||||+||||+
T Consensus 71 ---~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL-- 145 (248)
T COG1116 71 ---GPDIGYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARAL-- 145 (248)
T ss_pred ---CCCEEEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHH--
Confidence 567999999999999999999999999999888888888999999999999999999999999999999865433
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |++|+|
T Consensus 146 ------------------------------------~~~-----------------------------------P~lLLl 154 (248)
T COG1116 146 ------------------------------------ATR-----------------------------------PKLLLL 154 (248)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEE
Confidence 233 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCC
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAG 340 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~G 340 (601)
|||+++||+.++..+.+.+.++|. ..++||++||||++|+..++|||++|.++
T Consensus 155 DEPFgALDalTR~~lq~~l~~lw~----~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 155 DEPFGALDALTREELQDELLRLWE----ETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHH----hhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999999984 46899999999999999999999999874
No 30
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.9e-48 Score=389.12 Aligned_cols=214 Identities=27% Similarity=0.374 Sum_probs=193.7
Q ss_pred hhhccccccccc-CCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 50 SLFESLSENRDK-LGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+.+++++|.|.+ .+....|++||||+|.+ +|+||| ||||| .||+++|..|++|+|.++|.++..
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGA--GKSTL------iR~iN~Le~PtsG~v~v~G~di~~l 73 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGA--GKSTL------LRLINLLERPTSGSVFVDGQDLTAL 73 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCC--cHHHH------HHHHhccCCCCCceEEEcCEecccC
Confidence 458999999987 44567899999999988 999999 67765 679999999999999999998864
Q ss_pred ---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhch
Q psy7365 122 ---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNV 198 (601)
Q Consensus 122 ---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~ 198 (601)
.....|++||++||++.++...||.+|++|+++..|+++++.++|+.++|+.+||+++.+++|.+|||||||||+||
T Consensus 74 ~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIA 153 (339)
T COG1135 74 SEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIA 153 (339)
T ss_pred ChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCC
Q psy7365 199 KVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPA 278 (601)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 278 (601)
|||. ++ |
T Consensus 154 RALa--------------------------------------~~-----------------------------------P 160 (339)
T COG1135 154 RALA--------------------------------------NN-----------------------------------P 160 (339)
T ss_pred HHHh--------------------------------------cC-----------------------------------C
Confidence 5443 33 5
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 279 STVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 279 ~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++|++|||||+|||.+.+.+.++|++++ +.-|.||+++||.|+.+.++|||+++|++|+++..|+.
T Consensus 161 ~iLL~DEaTSALDP~TT~sIL~LL~~In----~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v 226 (339)
T COG1135 161 KILLCDEATSALDPETTQSILELLKDIN----RELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTV 226 (339)
T ss_pred CEEEecCccccCChHHHHHHHHHHHHHH----HHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccH
Confidence 8999999999999999999999999995 35699999999999999999999999999999988753
No 31
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.3e-45 Score=447.01 Aligned_cols=150 Identities=28% Similarity=0.428 Sum_probs=131.1
Q ss_pred ccccCCCCcccCCCCCHHHHHHHhHHhcC---CChhHHHHHHHHHHHHcCCCccccccc-----CcCChHHHHHHHHHHH
Q psy7365 373 YIGYCPQFDALNDRLTPREHLEFYSRVRN---LPSVLLNTIVNESLNKFALGHYSDREV-----RTLSGGNKRKLSTAIA 444 (601)
Q Consensus 373 ~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g---~~~~~~~~~~~~lLe~~~L~~~~~~~~-----~~LSgGqkQRl~lA~A 444 (601)
.+|||+|++.+++.+||+|++.|.+.++. .+.++..+.++++++.++|.+..++.+ +.|||||||||+||++
T Consensus 954 ~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~a 1033 (1470)
T PLN03140 954 ISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVE 1033 (1470)
T ss_pred heEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHH
Confidence 37899999999999999999999765431 233344567899999999998888886 5899999999999999
Q ss_pred HhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChh-HHHhhCCEEEEEeC-CEEEEecCH----HHHH
Q psy7365 445 LLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME-ECEALCTKLTIMVN-GQFTCLGSA----THLK 518 (601)
Q Consensus 445 L~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~-e~~~l~drv~iL~~-G~iv~~G~~----~~L~ 518 (601)
|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++..+||++++|++ |++++.|++ +++.
T Consensus 1034 L~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~ 1113 (1470)
T PLN03140 1034 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKII 1113 (1470)
T ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHH
Confidence 99999999999999999999999999999999888999999999998 68889999999996 899999996 3555
Q ss_pred HHhC
Q psy7365 519 SKYG 522 (601)
Q Consensus 519 ~~~~ 522 (601)
+.|.
T Consensus 1114 ~yF~ 1117 (1470)
T PLN03140 1114 EYFE 1117 (1470)
T ss_pred HHHH
Confidence 5443
No 32
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-45 Score=384.07 Aligned_cols=212 Identities=27% Similarity=0.372 Sum_probs=189.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
+.++||+|.||+.. +|+|+||++.. +||||| |||| + .|||+||.+|++|+|.++|++++.-+
T Consensus 4 i~l~~v~K~yg~~~----~l~~i~l~i~~Gef~vllGPSGc--GKST-----l-Lr~IAGLe~~~~G~I~i~g~~vt~l~ 71 (338)
T COG3839 4 LELKNVRKSFGSFE----VLKDVNLDIEDGEFVVLLGPSGC--GKST-----L-LRMIAGLEEPTSGEILIDGRDVTDLP 71 (338)
T ss_pred EEEeeeEEEcCCce----eeecceEEEcCCCEEEEECCCCC--CHHH-----H-HHHHhCCCCCCCceEEECCEECCCCC
Confidence 45899999998754 99999999977 999999 5655 4 57999999999999999999997622
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
..+|.||+|||++.+||+|||+||++|++.+.+++++++++|+.++.+.++|++..+++|.+|||||||||++|||+
T Consensus 72 -P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAl-- 148 (338)
T COG3839 72 -PEKRGIAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARAL-- 148 (338)
T ss_pred -hhHCCEEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHH--
Confidence 23578999999999999999999999999999999999999999999999999999999999999999999865543
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |++++|
T Consensus 149 ------------------------------------Vr~-----------------------------------P~v~L~ 157 (338)
T COG3839 149 ------------------------------------VRK-----------------------------------PKVFLL 157 (338)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEe
Confidence 333 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
|||+|+||+..|..+...|+++. +.-|.|+|++|||-.|+..++|||++|.+|++...|++..+
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh----~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~el 221 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLH----ERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLEL 221 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHH----HhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHH
Confidence 99999999999999999999984 45689999999999999999999999999999988877543
No 33
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-45 Score=386.21 Aligned_cols=213 Identities=27% Similarity=0.382 Sum_probs=186.7
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
+...+++|+|.|| +..+|+|+||++.+ |||||| ||||| .|||+|+..|++|+|.++|+++..
T Consensus 4 ~~l~i~~v~k~yg----~~~av~~isl~i~~Gef~~lLGPSGc--GKTTl------LR~IAGfe~p~~G~I~l~G~~i~~ 71 (352)
T COG3842 4 PALEIRNVSKSFG----DFTAVDDISLDIKKGEFVTLLGPSGC--GKTTL------LRMIAGFEQPSSGEILLDGEDITD 71 (352)
T ss_pred ceEEEEeeeeecC----CeeEEecceeeecCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEECCC
Confidence 4456999999998 45599999999988 999999 56654 579999999999999999999975
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcC-CChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQ-VPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
- ..-+|.||+|||+.+|||+|||+||++|++...+ .+++++++++.++++.++|+++.+++|.+|||||||||++|||
T Consensus 72 l-pp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARA 150 (352)
T COG3842 72 V-PPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARA 150 (352)
T ss_pred C-ChhhcccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHH
Confidence 3 2336789999999999999999999999999655 4456788999999999999999999999999999999986544
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 151 L--------------------------------------~~~-----------------------------------P~v 157 (352)
T COG3842 151 L--------------------------------------VPE-----------------------------------PKV 157 (352)
T ss_pred h--------------------------------------hcC-----------------------------------cch
Confidence 3 232 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
|+||||.|+||..-|..+...++++. +..|.|.|++|||-+|+..++|||++|++|+|.-.|++..
T Consensus 158 LLLDEPlSaLD~kLR~~mr~Elk~lq----~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~e 223 (352)
T COG3842 158 LLLDEPLSALDAKLREQMRKELKELQ----RELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEE 223 (352)
T ss_pred hhhcCcccchhHHHHHHHHHHHHHHH----HhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHH
Confidence 99999999999999999999999984 4469999999999999999999999999999988887643
No 34
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.5e-44 Score=437.16 Aligned_cols=140 Identities=23% Similarity=0.361 Sum_probs=115.0
Q ss_pred cccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCc-------ccccc----cCcCChHHHHHHH
Q psy7365 372 SYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGH-------YSDRE----VRTLSGGNKRKLS 440 (601)
Q Consensus 372 ~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~-------~~~~~----~~~LSgGqkQRl~ 440 (601)
+.||||||++.+|+ .|++|||.|+.. ..+ .+.+.++++..++.+ -.|.. -..||||||||++
T Consensus 1296 ~~i~~V~Qep~LF~-gTIreNI~~g~~--~at----~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIa 1368 (1466)
T PTZ00265 1296 NLFSIVSQEPMLFN-MSIYENIKFGKE--DAT----REDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIA 1368 (1466)
T ss_pred hhccEeCCCCcccc-ccHHHHHhcCCC--CCC----HHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHH
Confidence 46899999998885 799999988521 122 234556666655433 23433 3469999999999
Q ss_pred HHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccChhHHHhhCCEEEEEeC----CEEE-EecCH
Q psy7365 441 TAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAV-SEGRCVILTSHNMEECEALCTKLTIMVN----GQFT-CLGSA 514 (601)
Q Consensus 441 lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~-~~G~tVllsTHdl~e~~~l~drv~iL~~----G~iv-~~G~~ 514 (601)
|||||+.+|+|||||||||+||+.+.+.+.+.|.++. .+|+|+|++||.++.+.. ||+|++|++ |+++ +.|+.
T Consensus 1369 IARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~-aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1369 IARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKR-SDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred HHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHh-CCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999999999999999999986 368999999999988765 999999999 9965 79999
Q ss_pred HHHHH
Q psy7365 515 THLKS 519 (601)
Q Consensus 515 ~~L~~ 519 (601)
++|.+
T Consensus 1448 ~eLl~ 1452 (1466)
T PTZ00265 1448 EELLS 1452 (1466)
T ss_pred HHHHh
Confidence 99975
No 35
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2e-44 Score=342.22 Aligned_cols=208 Identities=26% Similarity=0.389 Sum_probs=187.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC--
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-- 121 (601)
+.|++++|.|+ ++ ..||+|+||++.+ .||||| ||||| +|+|.+..+|++|+|.++|+++..
T Consensus 2 I~f~~V~k~Y~--~g-~~aL~~vs~~i~~Gef~fl~GpSGA--GKSTl------lkLi~~~e~pt~G~i~~~~~dl~~l~ 70 (223)
T COG2884 2 IRFENVSKAYP--GG-REALRDVSFHIPKGEFVFLTGPSGA--GKSTL------LKLIYGEERPTRGKILVNGHDLSRLK 70 (223)
T ss_pred eeehhhhhhcC--CC-chhhhCceEeecCceEEEEECCCCC--CHHHH------HHHHHhhhcCCCceEEECCeeccccc
Confidence 56899999964 44 6799999999988 999999 56665 679999999999999999999864
Q ss_pred --chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 122 --DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 122 --~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
...-+|++||+|||+..+.++.||+||++|.++..|.+++++++++.++|+.+||.++.+..|.+||||||||++|||
T Consensus 71 ~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIAR 150 (223)
T COG2884 71 GREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIAR 150 (223)
T ss_pred ccccchhhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHH
Confidence 344578999999999999999999999999999999999999999999999999999999999999999999998665
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
|++ ++ |+
T Consensus 151 AiV--------------------------------------~~-----------------------------------P~ 157 (223)
T COG2884 151 AIV--------------------------------------NQ-----------------------------------PA 157 (223)
T ss_pred HHc--------------------------------------cC-----------------------------------CC
Confidence 443 33 48
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
+||-||||++|||....++++++.++. ..|.||+++|||.+.+..+-.|++.+.+|+++.+.
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeein-----r~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEIN-----RLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHh-----hcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999983 57999999999999999999999999999987653
No 36
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-45 Score=347.10 Aligned_cols=210 Identities=27% Similarity=0.450 Sum_probs=192.2
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+.+|+|.|+. ...|++||||+++. +||||+ ||||+ .|||++++.|++|.|+++|.+...++.
T Consensus 3 ~v~~l~K~y~~---~v~AvrdVSF~ae~Gei~GlLG~NGA--GKTT~------LRmiatlL~P~~G~v~idg~d~~~~p~ 71 (245)
T COG4555 3 EVTDLTKSYGS---KVQAVRDVSFEAEEGEITGLLGENGA--GKTTL------LRMIATLLIPDSGKVTIDGVDTVRDPS 71 (245)
T ss_pred eeeehhhhccC---HHhhhhheeEEeccceEEEEEcCCCC--CchhH------HHHHHHhccCCCceEEEeecccccChH
Confidence 47899999876 55699999999987 999999 56654 579999999999999999999988888
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..|++||++|....+|..||++||+.|+++++++...+++++++++.+.|+|.+.+++.+.+||.||||||+||||
T Consensus 72 ~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARA---- 147 (245)
T COG4555 72 FVRRKIGVLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARA---- 147 (245)
T ss_pred HHhhhcceecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHH----
Confidence 8999999999888899999999999999999999999999999999999999999999999999999999986554
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
++|+| +++|||
T Consensus 148 ----------------------------------lvh~P-----------------------------------~i~vlD 158 (245)
T COG4555 148 ----------------------------------LVHDP-----------------------------------SILVLD 158 (245)
T ss_pred ----------------------------------HhcCC-----------------------------------CeEEEc
Confidence 34544 899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|||||||..+++.+.+.++++ +.+|++||++||.|+++..+|||++++.+|+++..|+..
T Consensus 159 EP~sGLDi~~~r~~~dfi~q~-----k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~ 218 (245)
T COG4555 159 EPTSGLDIRTRRKFHDFIKQL-----KNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIE 218 (245)
T ss_pred CCCCCccHHHHHHHHHHHHHh-----hcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHH
Confidence 999999999999999999998 457999999999999999999999999999999888654
No 37
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.4e-43 Score=431.31 Aligned_cols=140 Identities=22% Similarity=0.330 Sum_probs=117.9
Q ss_pred ccccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCccc-------cc----ccCcCChHHHHHH
Q psy7365 371 KSYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYS-------DR----EVRTLSGGNKRKL 439 (601)
Q Consensus 371 ~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~-------~~----~~~~LSgGqkQRl 439 (601)
|++|+|+||++.+|.. |++|||.++. .. .++++.++++..++.+.. |. ...+||||||||+
T Consensus 1312 R~~IsiVpQdp~LF~G-TIreNLd~~~---~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrl 1383 (1622)
T PLN03130 1312 RKVLGIIPQAPVLFSG-TVRFNLDPFN---EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLL 1383 (1622)
T ss_pred HhccEEECCCCccccc-cHHHHhCcCC---CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHH
Confidence 3579999999999876 9999997642 11 234466677766654332 22 3357999999999
Q ss_pred HHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 440 STAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 440 ~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+|||||+.+|+|||||||||+||+.+.+.+.+.|++.. +++|+|+++|.++.+.. ||||++|++|+|+..|++++|.+
T Consensus 1384 aLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~tI~~-~DrIlVLd~G~IvE~Gt~~eLl~ 1461 (1622)
T PLN03130 1384 SLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILVLDAGRVVEFDTPENLLS 1461 (1622)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChHHHHh-CCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999874 58999999999999987 99999999999999999999976
Q ss_pred H
Q psy7365 520 K 520 (601)
Q Consensus 520 ~ 520 (601)
+
T Consensus 1462 ~ 1462 (1622)
T PLN03130 1462 N 1462 (1622)
T ss_pred C
Confidence 4
No 38
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.3e-43 Score=431.28 Aligned_cols=141 Identities=22% Similarity=0.311 Sum_probs=118.2
Q ss_pred ccccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCccc-------c----cccCcCChHHHHHH
Q psy7365 371 KSYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYS-------D----REVRTLSGGNKRKL 439 (601)
Q Consensus 371 ~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~-------~----~~~~~LSgGqkQRl 439 (601)
|++++|+||++.+|+. |++|||.++. ..+ ++++.++++..++.+.. | ....+||||||||+
T Consensus 1309 R~~i~iVpQdp~LF~g-TIr~NL~~~~---~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl 1380 (1495)
T PLN03232 1309 RRVLSIIPQSPVLFSG-TVRFNIDPFS---EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLL 1380 (1495)
T ss_pred HhhcEEECCCCeeeCc-cHHHHcCCCC---CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHH
Confidence 3578999999999875 9999997642 122 23466677776664432 2 23357999999999
Q ss_pred HHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 440 STAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 440 ~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+|||||+.+|+|||||||||+||+++.+.+.+.|++.. +++|+|+++|.++.+.. ||||++|++|+++..|++++|.+
T Consensus 1381 aLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~Gt~~eLl~ 1458 (1495)
T PLN03232 1381 SLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLNTIID-CDKILVLSSGQVLEYDSPQELLS 1458 (1495)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHh-CCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999999863 57999999999999887 99999999999999999999976
Q ss_pred Hh
Q psy7365 520 KY 521 (601)
Q Consensus 520 ~~ 521 (601)
+.
T Consensus 1459 ~~ 1460 (1495)
T PLN03232 1459 RD 1460 (1495)
T ss_pred CC
Confidence 53
No 39
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.4e-44 Score=349.67 Aligned_cols=216 Identities=29% Similarity=0.388 Sum_probs=190.9
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
.+++.+++|++.||... +++|+||+|.+ +||||+ ||||| +|+|.|+++|++|+|.++|.++.
T Consensus 6 ~~~I~vr~v~~~fG~~~----Ild~v~l~V~~Gei~~iiGgSGs--GKStl------Lr~I~Gll~P~~GeI~i~G~~i~ 73 (263)
T COG1127 6 EPLIEVRGVTKSFGDRV----ILDGVDLDVPRGEILAILGGSGS--GKSTL------LRLILGLLRPDKGEILIDGEDIP 73 (263)
T ss_pred cceEEEeeeeeecCCEE----EecCceeeecCCcEEEEECCCCc--CHHHH------HHHHhccCCCCCCeEEEcCcchh
Confidence 67788999999997554 99999999988 999999 56654 57999999999999999999986
Q ss_pred C----chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhh-cCCChHHHHHHHHHHHHHcCCCcc-cCCccccCChHHHhh
Q psy7365 121 T----DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL-KQVPKDLAQLEISNMIGDLGIPHK-RTSLANTLSGGMQRK 194 (601)
Q Consensus 121 ~----~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~~qr 194 (601)
. ...++|+++|++||.-+||..+||+||++|+... .++|++.+++.+..-|+.+||... .+.+|++|||||++|
T Consensus 74 ~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KR 153 (263)
T COG1127 74 QLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKR 153 (263)
T ss_pred ccCHHHHHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHH
Confidence 4 2346789999999999999999999999998754 568999999999999999999988 999999999999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
+++|||+. .
T Consensus 154 vaLARAia--------------------------------------l--------------------------------- 162 (263)
T COG1127 154 VALARAIA--------------------------------------L--------------------------------- 162 (263)
T ss_pred HHHHHHHh--------------------------------------c---------------------------------
Confidence 98655322 2
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
+|+++++||||+||||.+...+-++|++++. .-|.|++++|||++.+...|||++++.+|++.+.|++..+
T Consensus 163 --dPell~~DEPtsGLDPI~a~~~~~LI~~L~~----~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 163 --DPELLFLDEPTSGLDPISAGVIDELIRELND----ALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred --CCCEEEecCCCCCCCcchHHHHHHHHHHHHH----hhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 2589999999999999999999999999953 3589999999999999999999999999999999987544
No 40
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-43 Score=355.14 Aligned_cols=212 Identities=28% Similarity=0.400 Sum_probs=189.1
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC--
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR-- 120 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~-- 120 (601)
++.++++++.|... .++++|+||++.+ +||||+ ||||| .++++|+++|++|+|.++|.++.
T Consensus 3 ~i~~~~l~~~y~~~---~~~l~~v~~~i~~Ge~~~i~G~nGs--GKSTL------~~~l~GLl~p~~G~v~~~g~~~~~~ 71 (235)
T COG1122 3 MIEAENLSFRYPGR---KAALKDVSLEIEKGERVLLIGPNGS--GKSTL------LKLLNGLLKPTSGEVLVDGLDTSSE 71 (235)
T ss_pred eEEEEEEEEEcCCC---ceeeeeeEEEECCCCEEEEECCCCC--CHHHH------HHHHcCcCcCCCCEEEECCeeccch
Confidence 45588999997543 7899999999987 999999 56665 57999999999999999999986
Q ss_pred CchHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 121 TDMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 121 ~~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
.....+++++|+|||+|. +|..-||.++++|+..+.|++++++++|+.++++.+|+.+.+++.+.+|||||||||+|
T Consensus 72 ~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaI-- 149 (235)
T COG1122 72 KSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAI-- 149 (235)
T ss_pred hhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHh--
Confidence 456778999999999994 78899999999999999999999999999999999999999999999999999999984
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
|++.|| .|+
T Consensus 150 ---------A~vLa~--------------------------------------------------------------~P~ 158 (235)
T COG1122 150 ---------AGVLAM--------------------------------------------------------------GPE 158 (235)
T ss_pred ---------hHHHHc--------------------------------------------------------------CCC
Confidence 343332 269
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++|||||||||||.+++.+.+++++++ ...|+|+|++|||++++..+|||+++|++|+++.+|++
T Consensus 159 iliLDEPta~LD~~~~~~l~~~l~~L~----~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p 223 (235)
T COG1122 159 ILLLDEPTAGLDPKGRRELLELLKKLK----EEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDP 223 (235)
T ss_pred EEEEcCCCCCCCHHHHHHHHHHHHHHH----hcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCH
Confidence 999999999999999999999999994 33479999999999999999999999999999888864
No 41
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-43 Score=366.10 Aligned_cols=213 Identities=35% Similarity=0.587 Sum_probs=188.2
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
+.+++|+|.|++ ...+|+|+||++.+ +||||| ||||| +|+|+|+++|++|+|.++|.++....
T Consensus 5 i~~~~l~k~~~~---~~~~l~~vs~~i~~Gei~gllG~NGA--GKTTl------lk~l~gl~~p~~G~i~i~G~~~~~~~ 73 (293)
T COG1131 5 IEVRNLTKKYGG---DKTALDGVSFEVEPGEIFGLLGPNGA--GKTTL------LKILAGLLKPTSGEILVLGYDVVKEP 73 (293)
T ss_pred eeecceEEEeCC---CCEEEeceeEEEcCCeEEEEECCCCC--CHHHH------HHHHhCCcCCCceEEEEcCEeCccCH
Confidence 347899999984 34599999999988 999999 56654 68999999999999999999987666
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
...++.+||+||+|.+|+++||+||+.|++.+++.+.+..+++++++++.+||.+..++++++||+|||||+++|+|
T Consensus 74 ~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~a--- 150 (293)
T COG1131 74 AKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALA--- 150 (293)
T ss_pred HHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcchhhcCHHHHHHHHHHHH---
Confidence 77888999999999999999999999999999998766667789999999999997799999999999999985433
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
++++ |+++||
T Consensus 151 -----------------------------------L~~~-----------------------------------P~lliL 160 (293)
T COG1131 151 -----------------------------------LLHD-----------------------------------PELLIL 160 (293)
T ss_pred -----------------------------------HhcC-----------------------------------CCEEEE
Confidence 3444 489999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCC-cEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSG-RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G-~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
||||+||||.++..++++|+++. .+| +||+++||.++++..+||||++|.+|+++.+++...+
T Consensus 161 DEPt~GLDp~~~~~~~~~l~~l~-----~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l 224 (293)
T COG1131 161 DEPTSGLDPESRREIWELLRELA-----KEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEEL 224 (293)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHH-----hCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999984 345 8999999999999999999999999999998865443
No 42
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.2e-42 Score=422.30 Aligned_cols=140 Identities=24% Similarity=0.319 Sum_probs=117.4
Q ss_pred ccccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcc-------ccccc----CcCChHHHHHH
Q psy7365 371 KSYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHY-------SDREV----RTLSGGNKRKL 439 (601)
Q Consensus 371 ~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~-------~~~~~----~~LSgGqkQRl 439 (601)
|++++|+||++.+|+. |+++||..+. ..+ ++++.++++..++.+. .|..+ ..||||||||+
T Consensus 1359 R~~i~iVpQdp~LF~g-TIr~NLdp~~---~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl 1430 (1522)
T TIGR00957 1359 RFKITIIPQDPVLFSG-SLRMNLDPFS---QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLV 1430 (1522)
T ss_pred HhcCeEECCCCcccCc-cHHHHcCccc---CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHH
Confidence 3579999999999886 9999997432 122 2346667777666432 33334 56999999999
Q ss_pred HHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 440 STAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 440 ~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+|||||+.+|+|||||||||+||+++.+.+.+.|++.. +++|||+++|.++.+.. ||||++|++|+|++.|++++|.+
T Consensus 1431 ~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~ti~~-~DrIlVld~G~IvE~G~~~eLl~ 1508 (1522)
T TIGR00957 1431 CLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLNTIMD-YTRVIVLDKGEVAEFGAPSNLLQ 1508 (1522)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHHh-CCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999998863 57999999999999886 89999999999999999999976
Q ss_pred H
Q psy7365 520 K 520 (601)
Q Consensus 520 ~ 520 (601)
+
T Consensus 1509 ~ 1509 (1522)
T TIGR00957 1509 Q 1509 (1522)
T ss_pred C
Confidence 5
No 43
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.1e-43 Score=366.01 Aligned_cols=215 Identities=27% Similarity=0.490 Sum_probs=188.3
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccC
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDI 119 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~ 119 (601)
..++..+++|+|.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++
T Consensus 4 ~~~~i~i~~l~k~~~~----~~~l~~vsl~i~~Gei~gllGpNGa--GKSTL------l~~l~Gl~~p~~G~v~i~G~~~ 71 (306)
T PRK13537 4 SVAPIDFRNVEKRYGD----KLVVDGLSFHVQRGECFGLLGPNGA--GKTTT------LRMLLGLTHPDAGSISLCGEPV 71 (306)
T ss_pred CCceEEEEeEEEEECC----eEEEecceEEEeCCcEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEec
Confidence 3345679999999964 4599999999988 999999 56654 6799999999999999999998
Q ss_pred CCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 120 RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 120 ~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
.......++++||+||++.+|+++||+||+.|+...++.+..+...++.++++.+||.+..++++++||||||||+++|+
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLAR 151 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHH
Confidence 76555667889999999999999999999999888888777777788899999999999999999999999999998654
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
| ++++ |+
T Consensus 152 a--------------------------------------L~~~-----------------------------------P~ 158 (306)
T PRK13537 152 A--------------------------------------LVND-----------------------------------PD 158 (306)
T ss_pred H--------------------------------------HhCC-----------------------------------CC
Confidence 3 3343 48
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
++||||||+||||.+++.++++|+++. .+|+|||++||+++++..+|||+++|.+|+++..+++..
T Consensus 159 lllLDEPt~gLD~~~~~~l~~~l~~l~-----~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~ 224 (306)
T PRK13537 159 VLVLDEPTTGLDPQARHLMWERLRSLL-----ARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHA 224 (306)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHH-----hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999983 358999999999999999999999999999998876543
No 44
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-43 Score=354.63 Aligned_cols=210 Identities=22% Similarity=0.387 Sum_probs=181.8
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccc---cCCC
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDH---DIRT 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~---~~~~ 121 (601)
.+++++|.|+... +++|+||+++. +||||| ||||| .|+|+|++.|++|+|.++|+ |...
T Consensus 4 ~i~~~~~~~~~~~----a~~di~l~i~~Ge~vaLlGpSGa--GKsTl------LRiIAGLe~p~~G~I~~~~~~l~D~~~ 71 (345)
T COG1118 4 RINNVKKRFGAFG----ALDDISLDIKSGELVALLGPSGA--GKSTL------LRIIAGLETPDAGRIRLNGRVLFDVSN 71 (345)
T ss_pred eehhhhhhccccc----ccccceeeecCCcEEEEECCCCC--cHHHH------HHHHhCcCCCCCceEEECCEeccchhc
Confidence 4788999998777 88999999987 999999 56654 57999999999999999999 5433
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC--ChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV--PKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
.....++||+|||+..+|++|||.+|++|++..... ++.+++.++.++|+.+.|++..+++|.+|||||+|||++||
T Consensus 72 -~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALAR 150 (345)
T COG1118 72 -LAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALAR 150 (345)
T ss_pred -cchhhcceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHH
Confidence 234457899999999999999999999999977643 34678889999999999999999999999999999998654
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
|+ +- .|+
T Consensus 151 AL--------------------------------------A~-----------------------------------eP~ 157 (345)
T COG1118 151 AL--------------------------------------AV-----------------------------------EPK 157 (345)
T ss_pred Hh--------------------------------------hc-----------------------------------CCC
Confidence 32 11 368
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
+|+||||+++||...+.++..-|+++. .+.|.|++++|||.+|+.++||||++|.+|+|...|++..
T Consensus 158 vLLLDEPf~ALDa~vr~~lr~wLr~~~----~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~e 224 (345)
T COG1118 158 VLLLDEPFGALDAKVRKELRRWLRKLH----DRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDE 224 (345)
T ss_pred eEeecCCchhhhHHHHHHHHHHHHHHH----HhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHH
Confidence 999999999999999999999999883 4569999999999999999999999999999988887644
No 45
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-43 Score=356.98 Aligned_cols=202 Identities=27% Similarity=0.402 Sum_probs=181.3
Q ss_pred ccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c---hHH-hcccEEEE
Q psy7365 65 DSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D---MTT-IRRSLGVC 133 (601)
Q Consensus 65 ~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~---~~~-~~~~ig~v 133 (601)
-+-++.|+||++.. .|.||+ ||||| .|++++|++|++|+|.++|.++.. + ..+ .|+++++|
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGS--GKSTL------vR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMV 111 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGS--GKSTL------VRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMV 111 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCC--CHHHH------HHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhh
Confidence 35589999999987 999999 56665 579999999999999999999864 2 222 45689999
Q ss_pred ccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHH
Q psy7365 134 PQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSF 213 (601)
Q Consensus 134 ~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~ 213 (601)
||++.|+|+.||.||+.|+++..|+++++.++++.++|+.+||....+++|++|||||||||.+||||.+|
T Consensus 112 FQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~eLSGGMqQRVGLARAla~~--------- 182 (386)
T COG4175 112 FQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPNELSGGMQQRVGLARALAND--------- 182 (386)
T ss_pred hhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcccccchHHHHHHHHHHHccC---------
Confidence 99999999999999999999999999999999999999999999999999999999999999976654443
Q ss_pred hhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHH
Q psy7365 214 MNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPY 293 (601)
Q Consensus 214 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~ 293 (601)
|++|++|||+|+|||-
T Consensus 183 ----------------------------------------------------------------~~IlLMDEaFSALDPL 198 (386)
T COG4175 183 ----------------------------------------------------------------PDILLMDEAFSALDPL 198 (386)
T ss_pred ----------------------------------------------------------------CCEEEecCchhhcChH
Confidence 5899999999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 294 SRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 294 ~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
-|.++.+.|.+++ +.-.+||+|+|||++|+.+++|||++|.+|+++..|++..+
T Consensus 199 IR~~mQdeLl~Lq----~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eI 252 (386)
T COG4175 199 IRTEMQDELLELQ----AKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEI 252 (386)
T ss_pred HHHHHHHHHHHHH----HHhCCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHH
Confidence 9999999999985 33579999999999999999999999999999999988654
No 46
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.6e-42 Score=342.03 Aligned_cols=206 Identities=26% Similarity=0.370 Sum_probs=178.2
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.+++|+|.|+..+....+++|+||++.+ +||||| ||||| +++|.|+.+|++|.|.++|.++...
T Consensus 3 ~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGS--GKSTL------Lniig~ld~pt~G~v~i~g~d~~~l~~ 74 (226)
T COG1136 3 ELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGS--GKSTL------LNLLGGLDKPTSGEVLINGKDLTKLSE 74 (226)
T ss_pred EEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccCCCCceEEECCEEcCcCCH
Confidence 4789999997666568899999999988 999999 67765 6799999999999999999988642
Q ss_pred --hHH-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccC-CccccCChHHHhhhhch
Q psy7365 123 --MTT-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRT-SLANTLSGGMQRKLDNV 198 (601)
Q Consensus 123 --~~~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LSgG~~qr~~~~ 198 (601)
... .++.||||||+..|.|.+||.||+.+++...+.+....++++.++++.+||.+..+ ++|.+|||||||||+||
T Consensus 75 ~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 75 KELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHH
Confidence 223 34679999999999999999999999988888876566778899999999997766 99999999999999876
Q ss_pred hhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCC
Q psy7365 199 KVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPA 278 (601)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 278 (601)
||++++ |
T Consensus 155 RAL~~~-------------------------------------------------------------------------P 161 (226)
T COG1136 155 RALINN-------------------------------------------------------------------------P 161 (226)
T ss_pred HHHhcC-------------------------------------------------------------------------C
Confidence 554433 4
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 279 STVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 279 ~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
++++.||||++||..+.+.+++++.++. +..|+|+|++|||...+. .|||++.|.+|++
T Consensus 162 ~iilADEPTgnLD~~t~~~V~~ll~~~~----~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 162 KIILADEPTGNLDSKTAKEVLELLRELN----KERGKTIIMVTHDPELAK-YADRVIELKDGKI 220 (226)
T ss_pred CeEEeeCccccCChHHHHHHHHHHHHHH----HhcCCEEEEEcCCHHHHH-hCCEEEEEeCCee
Confidence 8999999999999999999999999984 346999999999987666 9999999999984
No 47
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.3e-42 Score=364.16 Aligned_cols=217 Identities=29% Similarity=0.488 Sum_probs=189.7
Q ss_pred CccchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccc
Q psy7365 44 SMGAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDH 117 (601)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~ 117 (601)
+|++.++.++||+|.|++ ..+|+|+||++.+ +||||| ||||| +++|+|+++|++|+|.++|.
T Consensus 36 ~~~~~~i~i~nl~k~y~~----~~~l~~is~~i~~Gei~gLlGpNGa--GKSTL------l~~L~Gl~~p~~G~i~i~G~ 103 (340)
T PRK13536 36 SMSTVAIDLAGVSKSYGD----KAVVNGLSFTVASGECFGLLGPNGA--GKSTI------ARMILGMTSPDAGKITVLGV 103 (340)
T ss_pred cCCceeEEEEEEEEEECC----EEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHcCCCCCceEEEECCE
Confidence 667777889999999964 4599999999988 999999 56655 67999999999999999999
Q ss_pred cCCCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 118 DIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 118 ~~~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
++.......++.+||+||++.+|+.+||.||+.|+...++.+..+...++.++++.+||.+..++++.+||||||||+++
T Consensus 104 ~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~l 183 (340)
T PRK13536 104 PVPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTL 183 (340)
T ss_pred ECCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHH
Confidence 98655556678899999999999999999999987777777666666778899999999999999999999999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
|+| ++++
T Consensus 184 A~a--------------------------------------L~~~----------------------------------- 190 (340)
T PRK13536 184 ARA--------------------------------------LIND----------------------------------- 190 (340)
T ss_pred HHH--------------------------------------HhcC-----------------------------------
Confidence 443 3333
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
|+++||||||+||||.++..++++|+++. .+|+|||++||+++++..+||++++|.+|+++..+++..
T Consensus 191 P~lLiLDEPt~gLD~~~r~~l~~~l~~l~-----~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~ 258 (340)
T PRK13536 191 PQLLILDEPTTGLDPHARHLIWERLRSLL-----ARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHA 258 (340)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHH-----hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 48999999999999999999999999983 358999999999999999999999999999998886543
No 48
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.6e-42 Score=363.22 Aligned_cols=213 Identities=26% Similarity=0.348 Sum_probs=184.9
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD- 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~- 122 (601)
+.+++|+|.|+..+....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGa--GKSTL------lr~I~gl~~p~~G~I~i~G~~i~~~~ 73 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGA--GKSTL------IRCVNLLERPTSGSVIVDGQDLTTLS 73 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEECCcCC
Confidence 35899999996433345799999999988 999999 56665 6799999999999999999998642
Q ss_pred h---HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 123 M---TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 123 ~---~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
. ...++.|||+||++.+|+.+||.||++|+....+.++.+.++++.++++.+||.+..++++.+|||||||||+|||
T Consensus 74 ~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IAR 153 (343)
T TIGR02314 74 NSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIAR 153 (343)
T ss_pred HHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHH
Confidence 1 2357789999999999999999999999888777777778888999999999999999999999999999998655
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
||+ .+ |+
T Consensus 154 AL~--------------------------------------~~-----------------------------------P~ 160 (343)
T TIGR02314 154 ALA--------------------------------------SN-----------------------------------PK 160 (343)
T ss_pred HHH--------------------------------------hC-----------------------------------CC
Confidence 432 22 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+|+|||||++|||.++..++++|+++. +..|.|||++||+++++.++||++++|++|+++..|+
T Consensus 161 iLLlDEPts~LD~~t~~~i~~lL~~l~----~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~ 224 (343)
T TIGR02314 161 VLLCDEATSALDPATTQSILELLKEIN----RRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGT 224 (343)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 999999999999999999999999984 2348999999999999999999999999999987664
No 49
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.2e-42 Score=337.28 Aligned_cols=214 Identities=29% Similarity=0.496 Sum_probs=191.8
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+++|+|.||+.. |++|+||+|++ +||||| |||| | .|||.|+++|++|+|+++|.++..
T Consensus 4 ~ie~vtK~Fg~k~----av~~isf~v~~G~i~GllG~NGA--GKTT-----t-fRmILglle~~~G~I~~~g~~~~~--- 68 (300)
T COG4152 4 EIEGVTKSFGDKK----AVDNISFEVPPGEIFGLLGPNGA--GKTT-----T-FRMILGLLEPTEGEITWNGGPLSQ--- 68 (300)
T ss_pred EEecchhccCcee----eecceeeeecCCeEEEeecCCCC--Cccc-----h-HHHHhccCCccCceEEEcCcchhh---
Confidence 4899999998766 99999999998 999999 5664 3 579999999999999999998843
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..+++|||+|.+-.+|+.+||.|.+.|.+++.|+++.+++.++..+|+++++....++++.+||.|+|||+.+
T Consensus 69 ~~~~rIGyLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LSKGnqQKIQf------- 141 (300)
T COG4152 69 EIKNRIGYLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELSKGNQQKIQF------- 141 (300)
T ss_pred hhhhhcccChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchHHHhhhhhhHHHHH-------
Confidence 4577899999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
|++ ++|.| +++|||
T Consensus 142 ---isa----------------------------viHeP-----------------------------------eLlILD 155 (300)
T COG4152 142 ---ISA----------------------------VIHEP-----------------------------------ELLILD 155 (300)
T ss_pred ---HHH----------------------------HhcCC-----------------------------------CEEEec
Confidence 332 45665 899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccccccccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLKNSFAR 357 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~~~g~ 357 (601)
||+|||||...+.+.+.+.++ +.+|.|||++||+|+-++++||++++|..|+.+..|+....+..+++
T Consensus 156 EPFSGLDPVN~elLk~~I~~l-----k~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~Gk 223 (300)
T COG4152 156 EPFSGLDPVNVELLKDAIFEL-----KEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSFGK 223 (300)
T ss_pred CCccCCChhhHHHHHHHHHHH-----HhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhcCC
Confidence 999999999999999999998 45799999999999999999999999999999998876555554443
No 50
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.4e-40 Score=409.32 Aligned_cols=140 Identities=24% Similarity=0.338 Sum_probs=117.4
Q ss_pred ccccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCccc-------cccc----CcCChHHHHHH
Q psy7365 371 KSYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYS-------DREV----RTLSGGNKRKL 439 (601)
Q Consensus 371 ~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~-------~~~~----~~LSgGqkQRl 439 (601)
|+.|||+||++.+|+. |+++||..+. ..+ ++++.++++..++.+.. |..+ .+||||||||+
T Consensus 1383 R~~I~iVpQdp~LF~g-TIreNIdp~~---~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrL 1454 (1560)
T PTZ00243 1383 RRQFSMIPQDPVLFDG-TVRQNVDPFL---EAS----SAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLM 1454 (1560)
T ss_pred HhcceEECCCCccccc-cHHHHhCccc---CCC----HHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHH
Confidence 3578999999998875 9999996531 112 34577788888775432 3333 57999999999
Q ss_pred HHHHHHhCC-CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 440 STAIALLGN-TPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 440 ~lA~AL~~~-P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
+|||||+++ |+|||||||||+||+.+.+.+.+.|++.. +++|||+++|.++.+.. ||||++|++|+|+..|++++|.
T Consensus 1455 aLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~VvE~Gt~~eLl 1532 (1560)
T PTZ00243 1455 CMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLHTVAQ-YDKIIVMDHGAVAEMGSPRELV 1532 (1560)
T ss_pred HHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHHHHHh-CCEEEEEECCEEEEECCHHHHH
Confidence 999999995 89999999999999999999999999863 47999999999988865 9999999999999999999997
Q ss_pred HH
Q psy7365 519 SK 520 (601)
Q Consensus 519 ~~ 520 (601)
++
T Consensus 1533 ~~ 1534 (1560)
T PTZ00243 1533 MN 1534 (1560)
T ss_pred hC
Confidence 64
No 51
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.4e-42 Score=327.91 Aligned_cols=210 Identities=30% Similarity=0.441 Sum_probs=185.7
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
..++|.|.|++.. +++|+||+|.+ +||||| ||||. ..|+.|+.+|++|.|.++|.|++. ++
T Consensus 6 ~a~~l~K~y~kr~----Vv~~Vsl~v~~GEiVGLLGPNGA--GKTT~------Fymi~Glv~~d~G~i~ld~~diT~lPm 73 (243)
T COG1137 6 VAENLAKSYKKRK----VVNDVSLEVNSGEIVGLLGPNGA--GKTTT------FYMIVGLVRPDSGKILLDDEDITKLPM 73 (243)
T ss_pred EehhhhHhhCCee----eeeeeeEEEcCCcEEEEECCCCC--CceeE------EEEEEEEEecCCceEEECCcccccCCh
Confidence 3789999998866 99999999988 999999 67753 689999999999999999999986 33
Q ss_pred -HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChH--HHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 124 -TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKD--LAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 124 -~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
...|.+|||+||+++.|..+||+||+...++....++. +.+.+++++|+.|+|.+.++++..+||||||+|+.||||
T Consensus 74 ~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARa 153 (243)
T COG1137 74 HKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARA 153 (243)
T ss_pred HHHhhcCcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHH
Confidence 34667899999999999999999999999988876655 444567899999999999999999999999999997654
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
|.. .|++
T Consensus 154 La~-------------------------------------------------------------------------~P~f 160 (243)
T COG1137 154 LAA-------------------------------------------------------------------------NPKF 160 (243)
T ss_pred Hhc-------------------------------------------------------------------------CCCE
Confidence 322 2689
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
++||||++|+||.+..++.++++.++ ..|..|+++.|++.|...+|||.++|.+|++.+.|++..
T Consensus 161 iLLDEPFAGVDPiaV~dIq~iI~~L~-----~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~e 225 (243)
T COG1137 161 ILLDEPFAGVDPIAVIDIQRIIKHLK-----DRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEE 225 (243)
T ss_pred EEecCCccCCCchhHHHHHHHHHHHH-----hCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHH
Confidence 99999999999999999999999983 579999999999999999999999999999999998754
No 52
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-41 Score=359.31 Aligned_cols=211 Identities=22% Similarity=0.330 Sum_probs=184.6
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
++.+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 6 ~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~llGpsGs--GKSTL------Lr~IaGl~~p~~G~I~~~g~~i~~~ 73 (351)
T PRK11432 6 FVVLKNITKRFGS----NTVIDNLNLTIKQGTMVTLLGPSGC--GKTTV------LRLVAGLEKPTEGQIFIDGEDVTHR 73 (351)
T ss_pred EEEEEeEEEEECC----eEEEeeeEEEEcCCCEEEEECCCCC--cHHHH------HHHHHCCCCCCceEEEECCEECCCC
Confidence 4558999999964 4589999999987 999999 56655 5799999999999999999998643
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
. ..++.+|||||++.+|+++||+||+.|+...++.++.+.++++.++++.+||.+..++++.+|||||||||++||||
T Consensus 74 ~-~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL- 151 (351)
T PRK11432 74 S-IQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARAL- 151 (351)
T ss_pred C-HHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHH-
Confidence 2 23578999999999999999999999998877888888888999999999999999999999999999999865433
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
+.+ |++|+
T Consensus 152 -------------------------------------~~~-----------------------------------P~lLL 159 (351)
T PRK11432 152 -------------------------------------ILK-----------------------------------PKVLL 159 (351)
T ss_pred -------------------------------------HcC-----------------------------------CCEEE
Confidence 233 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|||||++||+..+..+++.|+++. +..|+|+|++|||.+++..+||++++|.+|++...+++.
T Consensus 160 LDEP~s~LD~~~r~~l~~~l~~l~----~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~ 222 (351)
T PRK11432 160 FDEPLSNLDANLRRSMREKIRELQ----QQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQ 222 (351)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 999999999999999999999884 235899999999999999999999999999998877543
No 53
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.2e-41 Score=359.21 Aligned_cols=210 Identities=24% Similarity=0.365 Sum_probs=183.8
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..++||++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|+++....
T Consensus 5 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~GpsGs--GKSTL------Lr~iaGl~~p~~G~I~i~g~~~~~~~ 72 (353)
T TIGR03265 5 LSIDNIRKRFGA----FTALKDISLSVKKGEFVCLLGPSGC--GKTTL------LRIIAGLERQTAGTIYQGGRDITRLP 72 (353)
T ss_pred EEEEEEEEEeCC----eEEEEeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHCCCCCCceEEEECCEECCCCC
Confidence 458999999864 4589999999987 999999 56655 67999999999999999999986422
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
. .++.+|||||++.+||++||+||+.|+....+.++.+.+.+++++++.+||++..++++.+|||||||||++||||
T Consensus 73 ~-~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL-- 149 (353)
T TIGR03265 73 P-QKRDYGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARAL-- 149 (353)
T ss_pred H-HHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHH--
Confidence 2 3568999999999999999999999998877777788888999999999999999999999999999999865433
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |++++|
T Consensus 150 ------------------------------------~~~-----------------------------------P~llLL 158 (353)
T TIGR03265 150 ------------------------------------ATS-----------------------------------PGLLLL 158 (353)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEE
Confidence 233 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
||||++||+..+..+++.|+++. +..|.|+|++|||.+++..+||++++|.+|++...|++.
T Consensus 159 DEP~s~LD~~~r~~l~~~L~~l~----~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~ 220 (353)
T TIGR03265 159 DEPLSALDARVREHLRTEIRQLQ----RRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQ 220 (353)
T ss_pred cCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 99999999999999999999884 335899999999999999999999999999998877653
No 54
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=359.22 Aligned_cols=210 Identities=21% Similarity=0.287 Sum_probs=182.2
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..+++|++.|. ++..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++....
T Consensus 4 l~i~~l~~~~~---~~~~~l~~vsl~i~~Ge~~~llG~sGs--GKSTL------Lr~iaGl~~p~~G~I~~~g~~i~~~~ 72 (356)
T PRK11650 4 LKLQAVRKSYD---GKTQVIKGIDLDVADGEFIVLVGPSGC--GKSTL------LRMVAGLERITSGEIWIGGRVVNELE 72 (356)
T ss_pred EEEEeEEEEeC---CCCEEEeeeeEEEcCCCEEEEECCCCC--cHHHH------HHHHHCCCCCCceEEEECCEECCCCC
Confidence 45899999983 124599999999987 999999 56655 57999999999999999999986422
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
. .++.+|||||++.+|+++||+||+.|+....+.++.+.++++.++++.+||++..++++.+|||||||||+|||||+
T Consensus 73 ~-~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~- 150 (356)
T PRK11650 73 P-ADRDIAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIV- 150 (356)
T ss_pred H-HHCCEEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHh-
Confidence 2 34789999999999999999999999987777777777888999999999999999999999999999998654432
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
.+ |++|+|
T Consensus 151 -------------------------------------~~-----------------------------------P~llLL 158 (356)
T PRK11650 151 -------------------------------------RE-----------------------------------PAVFLF 158 (356)
T ss_pred -------------------------------------cC-----------------------------------CCEEEE
Confidence 22 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||||++||+..+..+++.|+++. +..|.|+|++|||.+++..+||++++|.+|+++..|++
T Consensus 159 DEP~s~LD~~~r~~l~~~l~~l~----~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~ 219 (356)
T PRK11650 159 DEPLSNLDAKLRVQMRLEIQRLH----RRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTP 219 (356)
T ss_pred eCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCH
Confidence 99999999999999999999883 23589999999999999999999999999999877754
No 55
>KOG0059|consensus
Probab=100.00 E-value=3.8e-41 Score=395.68 Aligned_cols=228 Identities=51% Similarity=0.840 Sum_probs=210.8
Q ss_pred ccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEE
Q psy7365 373 YIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLI 452 (601)
Q Consensus 373 ~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lL 452 (601)
.+|||||++.+++.+|.+|++.++++++|+++++.++.++.+++.++|.++++++++.||||||||+++|.|++.+|+++
T Consensus 641 ~iGyCPQ~d~l~~~lT~rEhL~~~arlrG~~~~di~~~v~~ll~~~~L~~~~~~~~~~ySgG~kRkLs~aialig~p~vi 720 (885)
T KOG0059|consen 641 QLGYCPQFDALWEELTGREHLEFYARLRGLPRSDIGSAIEKLLRLVGLGPYANKQVRTYSGGNKRRLSFAIALIGDPSVI 720 (885)
T ss_pred hcccCCchhhhhhhccHHHHHHHHHHHcCCChhHHHHHHHHHHHHcCChhhhccchhhCCCcchhhHHHHHHHhcCCCEE
Confidence 47999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEec
Q psy7365 453 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCA 532 (601)
Q Consensus 453 lLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~ 532 (601)
+|||||+|+||.+|+.+|++|.+++++|+.||+|||.|+|+|.+|||+++|.+|++.|.|+++++|++||.+|.+++++.
T Consensus 721 ~LDEPstGmDP~arr~lW~ii~~~~k~g~aiiLTSHsMeE~EaLCtR~aImv~G~l~ciGs~q~LKsrfG~gy~l~~~~~ 800 (885)
T KOG0059|consen 721 LLDEPSTGLDPKARRHLWDIIARLRKNGKAIILTSHSMEEAEALCTRTAIMVIGQLRCIGSPQELKSRYGSGYTLTVRIK 800 (885)
T ss_pred EecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHhhhhheeecCeeEEecChHHHHhhcCCcEEEEEEEC
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999987
Q ss_pred CCCc-hhHHHHHhhcCCCceeEEeeCcEEEEEEcCCc-ccHHHHHHHHHHccccCCCeeEEEecCCCCCCC
Q psy7365 533 EGRS-ADAQTYLSLNLPVADLVETHATQLQYRISGAV-SDLGALFRTLESAKTEAGLIVDYSLSQTSLEDS 601 (601)
Q Consensus 533 ~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~i~~~~v~~~sLEdv 601 (601)
.... ..+..++...+|++...+.+...+++.++.++ ...+++|..++......+ +.+|++++.+||||
T Consensus 801 ~~~~~~~v~~~~~~~~p~a~~~~~~~~~~~~~ip~~~~~~~~~vF~~le~~~~~~~-i~dyslsq~tLe~V 870 (885)
T KOG0059|consen 801 ELPEVSEVEKLLQNRFPGAVLKERHAGLLAFEIPKDEVVSLSEVFLALEKAKESFG-IEDYSLSQTTLEDV 870 (885)
T ss_pred CCcccchHHHHHHHhCCCcchhhhhhceEEEEcccchhhHHHHHHHHHHHHHHhcC-HHHHHHHHhhHHHH
Confidence 5333 35667778889999888888888899998554 456689999998887777 99999999999985
No 56
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=321.14 Aligned_cols=205 Identities=26% Similarity=0.389 Sum_probs=180.1
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+++++-.|...+ ..+++|+||++.+ +||||| ||||| .++++|+.+|+.|+|.++|+++..+-
T Consensus 6 ~~~~sl~y~g~~--~~~le~vsL~ia~ge~vv~lGpSGc--GKTTL------Lnl~AGf~~P~~G~i~l~~r~i~gPg-- 73 (259)
T COG4525 6 VSHLSLSYEGKP--RSALEDVSLTIASGELVVVLGPSGC--GKTTL------LNLIAGFVTPSRGSIQLNGRRIEGPG-- 73 (259)
T ss_pred hhheEEecCCcc--hhhhhccceeecCCCEEEEEcCCCc--cHHHH------HHHHhcCcCcccceEEECCEeccCCC--
Confidence 456777765443 6699999999988 999999 57665 57999999999999999999997653
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
..-|+|||++.++||+||.+|++|+++..|+++.+..+++.+++..+||.+..++++++||||||||+.+||||
T Consensus 74 --aergvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~qLSGGmrQRvGiARAL---- 147 (259)
T COG4525 74 --AERGVVFQNEALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYIWQLSGGMRQRVGIARAL---- 147 (259)
T ss_pred --ccceeEeccCccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccceEeecchHHHHHHHHHHh----
Confidence 23499999999999999999999999999999999999999999999999999999999999999999865432
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
.. .|++|+|||
T Consensus 148 ----------------------------------a~-----------------------------------eP~~LlLDE 158 (259)
T COG4525 148 ----------------------------------AV-----------------------------------EPQLLLLDE 158 (259)
T ss_pred ----------------------------------hc-----------------------------------CcceEeecC
Confidence 12 368999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec--CCccccccC
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA--AGKLQCCGS 347 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~--~GkIv~~G~ 347 (601)
|++.||.-+|+.+.++|.++|. ..|+.++++||+++|+..+++|+++|. .|+++....
T Consensus 159 PfgAlDa~tRe~mQelLldlw~----~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~ 218 (259)
T COG4525 159 PFGALDALTREQMQELLLDLWQ----ETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLP 218 (259)
T ss_pred chhhHHHHHHHHHHHHHHHHHH----HhCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecC
Confidence 9999999999999999999984 479999999999999999999999996 577766443
No 57
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-41 Score=329.72 Aligned_cols=214 Identities=27% Similarity=0.359 Sum_probs=186.7
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+..+++|+|.||++. |++||||++.+ +||||+ ||||+ .++|+|+++|++|+|+++|++++.
T Consensus 4 lL~v~~l~k~FGGl~----Al~~Vsl~v~~Gei~~LIGPNGA--GKTTl------fNlitG~~~P~~G~v~~~G~~it~l 71 (250)
T COG0411 4 LLEVRGLSKRFGGLT----AVNDVSLEVRPGEIVGLIGPNGA--GKTTL------FNLITGFYKPSSGTVIFRGRDITGL 71 (250)
T ss_pred eeeeccceeecCCEE----EEeceeEEEcCCeEEEEECCCCC--Cceee------eeeecccccCCCceEEECCcccCCC
Confidence 345899999999877 99999999988 999999 68876 789999999999999999999975
Q ss_pred -chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc-------CC-----ChHHHHHHHHHHHHHcCCCcccCCccccCC
Q psy7365 122 -DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK-------QV-----PKDLAQLEISNMIGDLGIPHKRTSLANTLS 188 (601)
Q Consensus 122 -~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~-------~~-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS 188 (601)
+....|.+|+..||++.+|++|||.||+..+.... +. ..++..+++.++|+.+||.+..++++++||
T Consensus 72 ~p~~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~Ls 151 (250)
T COG0411 72 PPHRIARLGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAGNLS 151 (250)
T ss_pred CHHHHHhccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhhcCC
Confidence 34456789999999999999999999998875422 11 345677889999999999999999999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
+|||+||.|||||+ .
T Consensus 152 yG~qR~LEIArALa--------------------------------------~--------------------------- 166 (250)
T COG0411 152 YGQQRRLEIARALA--------------------------------------T--------------------------- 166 (250)
T ss_pred hhHhHHHHHHHHHh--------------------------------------c---------------------------
Confidence 99999998654332 2
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
.|++|+||||.+||.|....++.++|+++. +..|.||++++|||+.+..+||||++|..|+++++|++
T Consensus 167 --------~P~lLLLDEPaAGln~~e~~~l~~~i~~i~----~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P 234 (250)
T COG0411 167 --------QPKLLLLDEPAAGLNPEETEELAELIRELR----DRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTP 234 (250)
T ss_pred --------CCCEEEecCccCCCCHHHHHHHHHHHHHHH----hcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCH
Confidence 369999999999999999999999999994 33579999999999999999999999999999999987
Q ss_pred ccc
Q psy7365 349 VFL 351 (601)
Q Consensus 349 ~lL 351 (601)
...
T Consensus 235 ~eV 237 (250)
T COG0411 235 EEV 237 (250)
T ss_pred HHH
Confidence 543
No 58
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.6e-39 Score=399.40 Aligned_cols=138 Identities=20% Similarity=0.322 Sum_probs=117.4
Q ss_pred cccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccc-------ccc----CcCChHHHHHHH
Q psy7365 372 SYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSD-------REV----RTLSGGNKRKLS 440 (601)
Q Consensus 372 ~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~-------~~~----~~LSgGqkQRl~ 440 (601)
++++|+||++.+|+. |+++||..+. .. .++++.++|+..+|.+... ..+ ..||||||||++
T Consensus 1292 ~~is~IpQdp~LF~G-TIR~NLdp~~---~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~ 1363 (1490)
T TIGR01271 1292 KAFGVIPQKVFIFSG-TFRKNLDPYE---QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMC 1363 (1490)
T ss_pred hceEEEeCCCccCcc-CHHHHhCccc---CC----CHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHH
Confidence 368999999999885 9999996532 11 2346778888888754332 222 369999999999
Q ss_pred HHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 441 TAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 441 lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||++||.++.+.. ||||++|++|+|+..|+|++|.+
T Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-~DrIlvL~~G~ivE~g~p~~Ll~ 1440 (1490)
T TIGR01271 1364 LARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVEALLE-CQQFLVIEGSSVKQYDSIQKLLN 1440 (1490)
T ss_pred HHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHHh-CCEEEEEECCEEEEeCCHHHHHc
Confidence 9999999999999999999999999999999999864 47999999999998876 99999999999999999999975
No 59
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=4.3e-41 Score=339.46 Aligned_cols=210 Identities=25% Similarity=0.308 Sum_probs=182.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.++||+.+|++ ...++|+||++.+ +||||| ||||| .|+|+|+++|.+|+|.++|+++.+ +.
T Consensus 4 ~~~~ls~~y~~----~~il~~ls~~i~~G~i~~iiGpNG~--GKSTL------Lk~l~g~l~p~~G~V~l~g~~i~~~~~ 71 (258)
T COG1120 4 EVENLSFGYGG----KPILDDLSFSIPKGEITGILGPNGS--GKSTL------LKCLAGLLKPKSGEVLLDGKDIASLSP 71 (258)
T ss_pred EEEEEEEEECC----eeEEecceEEecCCcEEEEECCCCC--CHHHH------HHHHhccCCCCCCEEEECCCchhhcCH
Confidence 47899999874 4599999999988 999999 57665 679999999999999999999975 55
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhh----cCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL----KQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~----~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
.++.+.+|||||.+...+.+||+|-+.++..- ++.+.++.++.+.++|+.+|+.++.+|.+.+||||||||+.|||
T Consensus 72 kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iAr 151 (258)
T COG1120 72 KELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIAR 151 (258)
T ss_pred HHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHH
Confidence 67888999999999888899999999998643 22234445567899999999999999999999999999986443
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
| ++++ |+
T Consensus 152 A--------------------------------------LaQ~-----------------------------------~~ 158 (258)
T COG1120 152 A--------------------------------------LAQE-----------------------------------TP 158 (258)
T ss_pred H--------------------------------------HhcC-----------------------------------CC
Confidence 3 2233 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
+++|||||++||+..+.+++++++++. +.+|+|+|++.||++.+.++||++++|.+|++++.|++.
T Consensus 159 iLLLDEPTs~LDi~~Q~evl~ll~~l~----~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ 224 (258)
T COG1120 159 ILLLDEPTSHLDIAHQIEVLELLRDLN----REKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPE 224 (258)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcc
Confidence 999999999999999999999999994 356999999999999999999999999999999999864
No 60
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.2e-40 Score=355.63 Aligned_cols=209 Identities=26% Similarity=0.374 Sum_probs=182.5
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCe--eEEEEccccCCCc
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSS--GTAKIYDHDIRTD 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~--G~v~~~g~~~~~~ 122 (601)
.+++|+|.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++ |+|.++|.++...
T Consensus 7 ~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~llGpsGs--GKSTL------Lr~iaGl~~p~~~~G~i~~~g~~~~~~ 74 (362)
T TIGR03258 7 RIDHLRVAYGA----NTVLDDLSLEIEAGELLALIGKSGC--GKTTL------LRAIAGFVKAAGLTGRIAIADRDLTHA 74 (362)
T ss_pred EEEEEEEEECC----eEEEeeeEEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCCEEEEECCEECCCC
Confidence 48899999864 3599999999977 999999 56655 579999999999 9999999988542
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
.. .++.+|||||++.+|+++||+||+.|+....+.++.+.+.++.++++.+||++..++++.+|||||||||++||||+
T Consensus 75 ~~-~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~ 153 (362)
T TIGR03258 75 PP-HKRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIA 153 (362)
T ss_pred CH-HHCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHh
Confidence 22 35689999999999999999999999988778887788889999999999999999999999999999998654432
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
.+ |++|+
T Consensus 154 --------------------------------------~~-----------------------------------P~llL 160 (362)
T TIGR03258 154 --------------------------------------IE-----------------------------------PDVLL 160 (362)
T ss_pred --------------------------------------cC-----------------------------------CCEEE
Confidence 32 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccC-CcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLS-GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~-G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|||||+|||+..+..+++.|+++. +.. |.|+|++|||++++..+|||+++|.+|+++..|++.
T Consensus 161 LDEP~s~LD~~~r~~l~~~l~~l~----~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~ 224 (362)
T TIGR03258 161 LDEPLSALDANIRANMREEIAALH----EELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQ 224 (362)
T ss_pred EcCccccCCHHHHHHHHHHHHHHH----HhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHH
Confidence 999999999999999999999884 223 799999999999999999999999999998877653
No 61
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.7e-40 Score=355.87 Aligned_cols=209 Identities=24% Similarity=0.324 Sum_probs=182.2
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++....
T Consensus 15 L~l~~l~~~~~~----~~~l~~vsl~i~~Ge~~~LlGpsGs--GKSTL------Lr~IaGl~~p~~G~I~~~g~~i~~~~ 82 (375)
T PRK09452 15 VELRGISKSFDG----KEVISNLDLTINNGEFLTLLGPSGC--GKTTV------LRLIAGFETPDSGRIMLDGQDITHVP 82 (375)
T ss_pred EEEEEEEEEECC----eEEEeeeEEEEeCCCEEEEECCCCC--cHHHH------HHHHhCCCCCCceEEEECCEECCCCC
Confidence 458999999864 4589999999987 999999 56655 57999999999999999999985422
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
..++.+|||||++.+|+++||.||+.|+....+.++.+.++++.++++.+||++..++++.+|||||||||++|||+
T Consensus 83 -~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL-- 159 (375)
T PRK09452 83 -AENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAV-- 159 (375)
T ss_pred -HHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHH--
Confidence 23568999999999999999999999988777777777778899999999999999999999999999999865432
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |++|+|
T Consensus 160 ------------------------------------~~~-----------------------------------P~llLL 168 (375)
T PRK09452 160 ------------------------------------VNK-----------------------------------PKVLLL 168 (375)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEE
Confidence 233 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||||++||+..+..+++.|+++. +..|.|+|++|||.+++..+||++++|.+|++...+++
T Consensus 169 DEP~s~LD~~~r~~l~~~L~~l~----~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~ 229 (375)
T PRK09452 169 DESLSALDYKLRKQMQNELKALQ----RKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTP 229 (375)
T ss_pred eCCCCcCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999984 23589999999999999999999999999999877754
No 62
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.7e-40 Score=351.43 Aligned_cols=199 Identities=26% Similarity=0.399 Sum_probs=175.3
Q ss_pred ccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chHHh----cccEEEE
Q psy7365 65 DSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMTTI----RRSLGVC 133 (601)
Q Consensus 65 ~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~~~----~~~ig~v 133 (601)
+..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. +...+ ++.+|||
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGs--GKSTL------Lr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v 76 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGS--GKSTT------VRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMV 76 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCC--hHHHH------HHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEE
Confidence 45699999999988 999999 56655 579999999999999999999864 23333 6789999
Q ss_pred ccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHH
Q psy7365 134 PQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSF 213 (601)
Q Consensus 134 ~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~ 213 (601)
||++.+|+++||.||+.|+....+.++.+..+++.++++.+||++..++++.+|||||||||++||||+
T Consensus 77 ~Q~~~l~~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~----------- 145 (363)
T TIGR01186 77 FQQFALFPHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALA----------- 145 (363)
T ss_pred ECCCcCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHh-----------
Confidence 999999999999999999988888887778889999999999999999999999999999998655433
Q ss_pred hhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHH
Q psy7365 214 MNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPY 293 (601)
Q Consensus 214 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~ 293 (601)
.+ |+++||||||++|||.
T Consensus 146 ---------------------------~~-----------------------------------p~iLLlDEP~saLD~~ 163 (363)
T TIGR01186 146 ---------------------------AE-----------------------------------PDILLMDEAFSALDPL 163 (363)
T ss_pred ---------------------------cC-----------------------------------CCEEEEeCCcccCCHH
Confidence 22 5899999999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 294 SRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 294 ~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++..+.+.+.+++ +..|+|||++|||++++..+|||+++|.+|+++..|++
T Consensus 164 ~r~~l~~~l~~l~----~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~ 214 (363)
T TIGR01186 164 IRDSMQDELKKLQ----ATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTP 214 (363)
T ss_pred HHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCH
Confidence 9999999999884 23589999999999999999999999999999877754
No 63
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.9e-40 Score=345.18 Aligned_cols=198 Identities=35% Similarity=0.583 Sum_probs=174.0
Q ss_pred cceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHHhcccEEEEccCCCC
Q psy7365 66 SYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCPQYNAL 139 (601)
Q Consensus 66 ~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~Q~~~~ 139 (601)
.++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.......++.+||+||++.+
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGa--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~ 77 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGA--GKTTT------IRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASV 77 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCC
Confidence 4699999999988 999999 56655 679999999999999999998865444567789999999999
Q ss_pred CCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhh
Q psy7365 140 FDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANN 219 (601)
Q Consensus 140 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~ 219 (601)
|+.+||.||+.|+...++.+..+.+.++.++++.+||.+..++++.+||||||||+++|+|
T Consensus 78 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~a------------------- 138 (302)
T TIGR01188 78 DEDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAAS------------------- 138 (302)
T ss_pred CCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHH-------------------
Confidence 9999999999998887787766677789999999999999999999999999999986543
Q ss_pred hhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHH
Q psy7365 220 VILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIW 299 (601)
Q Consensus 220 ~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~ 299 (601)
++++ |++|||||||+||||.+++.++
T Consensus 139 -------------------l~~~-----------------------------------p~lllLDEPt~gLD~~~~~~l~ 164 (302)
T TIGR01188 139 -------------------LIHQ-----------------------------------PDVLFLDEPTTGLDPRTRRAIW 164 (302)
T ss_pred -------------------HhcC-----------------------------------CCEEEEeCCCcCCCHHHHHHHH
Confidence 3333 5899999999999999999999
Q ss_pred HHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 300 ELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 300 ~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
++|+++. .+|+|||++||+++++..+||++++|.+|+++..++..
T Consensus 165 ~~l~~~~-----~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 209 (302)
T TIGR01188 165 DYIRALK-----EEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPE 209 (302)
T ss_pred HHHHHHH-----hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 9999873 35899999999999999999999999999998877543
No 64
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.1e-40 Score=345.11 Aligned_cols=210 Identities=30% Similarity=0.512 Sum_probs=181.1
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
++.+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 4 ~i~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~l~G~NGa--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~ 71 (303)
T TIGR01288 4 AIDLVGVSKSYGD----KVVVNDLSFTIARGECFGLLGPNGA--GKSTI------ARMLLGMISPDRGKITVLGEPVPSR 71 (303)
T ss_pred EEEEEeEEEEeCC----eEEEcceeEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEECccc
Confidence 3558999999864 4599999999988 999999 56655 6799999999999999999988654
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
....++.+||+||++.+|+.+||.||+.++...++.+..+.+.++.++++.+|+.+..++++.+||||||||+++|+||
T Consensus 72 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al- 150 (303)
T TIGR01288 72 ARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARAL- 150 (303)
T ss_pred HHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHH-
Confidence 4456778999999999999999999999876666666566667788999999999999999999999999999865432
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
+++ |+++|
T Consensus 151 -------------------------------------~~~-----------------------------------p~lll 158 (303)
T TIGR01288 151 -------------------------------------IND-----------------------------------PQLLI 158 (303)
T ss_pred -------------------------------------hcC-----------------------------------CCEEE
Confidence 233 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||||+|||+.++..++++|+++. .+|+|||++||+++++..+||++++|.+|+++..+++
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~-----~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 219 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLL-----ARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRP 219 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHH-----hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 999999999999999999999873 3589999999999999999999999999999877754
No 65
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.9e-40 Score=344.11 Aligned_cols=209 Identities=27% Similarity=0.460 Sum_probs=183.6
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 4 ~~~~l~~~~~~----~~~l~~is~~i~~Gei~~l~G~NGa--GKTTL------l~~l~Gl~~~~~G~i~i~g~~~~~~~~ 71 (301)
T TIGR03522 4 RVSSLTKLYGT----QNALDEVSFEAQKGRIVGFLGPNGA--GKSTT------MKIITGYLPPDSGSVQVCGEDVLQNPK 71 (301)
T ss_pred EEEEEEEEECC----EEEEEEeEEEEeCCeEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEcccChH
Confidence 48999999863 4599999999988 999999 56655 679999999999999999999866555
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
.+++.+||+||++.+|+++||.||+.|+...++.+.++..+++.++++.+||.+..++++.+||||||||+++|+|
T Consensus 72 ~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~a---- 147 (301)
T TIGR03522 72 EVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQA---- 147 (301)
T ss_pred HHHhceEEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHH----
Confidence 6678899999999999999999999998888887767677788999999999999999999999999999985443
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
++++ |+++|||
T Consensus 148 ----------------------------------l~~~-----------------------------------p~lliLD 158 (301)
T TIGR03522 148 ----------------------------------LIHD-----------------------------------PKVLILD 158 (301)
T ss_pred ----------------------------------HhcC-----------------------------------CCEEEEc
Confidence 3333 4899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
|||+||||.+++.+++.|+++ + +++|||++||+++++..+|||+++|.+|++...|+...
T Consensus 159 EPt~gLD~~~~~~l~~~l~~~-----~-~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~ 218 (301)
T TIGR03522 159 EPTTGLDPNQLVEIRNVIKNI-----G-KDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDE 218 (301)
T ss_pred CCcccCCHHHHHHHHHHHHHh-----c-CCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999987 2 36999999999999999999999999999988776543
No 66
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-41 Score=328.23 Aligned_cols=216 Identities=26% Similarity=0.374 Sum_probs=188.4
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
+++.+++|++.|. ++.++|+||||++.+ +||||+ ||||| .|+|+|+..|++|+|.++|.++..
T Consensus 2 ~~i~~~nl~k~yp---~~~~aL~~Vnl~I~~GE~VaiIG~SGa--GKSTL------LR~lngl~d~t~G~i~~~g~~i~~ 70 (258)
T COG3638 2 MMIEVKNLSKTYP---GGHQALKDVNLEINQGEMVAIIGPSGA--GKSTL------LRSLNGLVDPTSGEILFNGVQITK 70 (258)
T ss_pred ceEEEeeeeeecC---CCceeeeeEeEEeCCCcEEEEECCCCC--cHHHH------HHHHhcccCCCcceEEecccchhc
Confidence 3566999999973 456799999999988 999999 56665 679999999999999999998864
Q ss_pred ----chHHhcccEEEEccCCCCCCCCCHHHHHHHhH--------hhcCCChHHHHHHHHHHHHHcCCCcccCCccccCCh
Q psy7365 122 ----DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYS--------QLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSG 189 (601)
Q Consensus 122 ----~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~--------~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSg 189 (601)
.....|+.+||+||++.+.+.++|.+|+..+. .++|+...+.+.++-++|+++||.++..+++.+|||
T Consensus 71 ~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSG 150 (258)
T COG3638 71 LKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSG 150 (258)
T ss_pred cchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCc
Confidence 34556789999999999999999999998654 356777677788889999999999999999999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
||||||+|||||+ ++
T Consensus 151 GQQQRVaIARaL~--------------------------------------Q~--------------------------- 165 (258)
T COG3638 151 GQQQRVAIARALV--------------------------------------QQ--------------------------- 165 (258)
T ss_pred chhHHHHHHHHHh--------------------------------------cC---------------------------
Confidence 9999998765443 33
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|++++-|||+++|||.+.+.+++.|+++. +..|.|+|+.-|+++.+.++|||++-|.+|+++.+|++.
T Consensus 166 --------pkiILADEPvasLDp~~a~~Vm~~l~~in----~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~ 233 (258)
T COG3638 166 --------PKIILADEPVASLDPESAKKVMDILKDIN----QEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPAS 233 (258)
T ss_pred --------CCEEecCCcccccChhhHHHHHHHHHHHH----HHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChh
Confidence 58999999999999999999999999994 457999999999999999999999999999999999765
Q ss_pred cc
Q psy7365 350 FL 351 (601)
Q Consensus 350 lL 351 (601)
.+
T Consensus 234 el 235 (258)
T COG3638 234 EL 235 (258)
T ss_pred hh
Confidence 43
No 67
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=353.66 Aligned_cols=211 Identities=25% Similarity=0.355 Sum_probs=183.6
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..++++++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+.+|++|+|.++|+++...
T Consensus 19 ~l~l~~v~~~~~~----~~~l~~vsl~i~~Ge~~~llGpsGs--GKSTL------Lr~IaGl~~p~~G~I~i~g~~i~~~ 86 (377)
T PRK11607 19 LLEIRNLTKSFDG----QHAVDDVSLTIYKGEIFALLGASGC--GKSTL------LRMLAGFEQPTAGQIMLDGVDLSHV 86 (377)
T ss_pred eEEEEeEEEEECC----EEEEeeeEEEEcCCCEEEEECCCCC--cHHHH------HHHHhCCCCCCceEEEECCEECCCC
Confidence 4569999999864 3599999999987 999999 56655 5799999999999999999988542
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
. ..++.+||+||++.+|+++||.||+.|+....+.++.+.++++.++++.+||.+..++++.+|||||||||+|||||
T Consensus 87 ~-~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL- 164 (377)
T PRK11607 87 P-PYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSL- 164 (377)
T ss_pred C-HHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHH-
Confidence 2 24678999999999999999999999998777777777888999999999999999999999999999999865433
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
+.+ |++|+
T Consensus 165 -------------------------------------~~~-----------------------------------P~lLL 172 (377)
T PRK11607 165 -------------------------------------AKR-----------------------------------PKLLL 172 (377)
T ss_pred -------------------------------------hcC-----------------------------------CCEEE
Confidence 233 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|||||++||+..+..+++.|+++. +..|.|+|++|||.+++..+|||+++|.+|++...|++.
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~----~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~ 235 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDIL----ERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPE 235 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHH
Confidence 999999999999999999998874 235899999999999999999999999999998877643
No 68
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-40 Score=327.95 Aligned_cols=215 Identities=23% Similarity=0.302 Sum_probs=183.4
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+..++||++.|+..+....+++||||++.+ +|+||| ||||| + ++|+|+.+|++|+|+++|.++..
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGs--GKSTL-----~-r~l~Gl~~p~~G~I~~~G~~~~~~ 74 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGS--GKSTL-----A-RLLAGLEKPSSGSILLDGKPLAPK 74 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCC--CHHHH-----H-HHHhcccCCCCceEEECCcccCcc
Confidence 345899999998877667899999999988 999999 56554 4 59999999999999999987643
Q ss_pred -chHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-ccCCccccCChHHHhhhhc
Q psy7365 122 -DMTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-KRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 122 -~~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qr~~~ 197 (601)
.....++.|.+|||+| ++-|..||.+-+.=++...|.++.+ +++.++++.+||.. .++++|.+|||||+||++|
T Consensus 75 ~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~--~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 75 KRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQ--QRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ccchhhccceeEEecCCccccCcchhHHHHHhhhhccCCccHHH--HHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHH
Confidence 2335677899999998 4899999999998888877776544 45999999999984 6899999999999999985
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
|||+ +.+
T Consensus 153 ARAL--------------------------------------~~~----------------------------------- 159 (252)
T COG1124 153 ARAL--------------------------------------IPE----------------------------------- 159 (252)
T ss_pred HHHh--------------------------------------ccC-----------------------------------
Confidence 4432 222
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
|++||||||||+||+..+.++|++|.+++ +..|.|.|++|||+..+..+|||+++|++|+++..++...
T Consensus 160 PklLIlDEptSaLD~siQa~IlnlL~~l~----~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~ 228 (252)
T COG1124 160 PKLLILDEPTSALDVSVQAQILNLLLELK----KERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEE 228 (252)
T ss_pred CCEEEecCchhhhcHHHHHHHHHHHHHHH----HhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhh
Confidence 59999999999999999999999999995 3468999999999999999999999999999998775433
No 69
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6.5e-40 Score=325.95 Aligned_cols=209 Identities=24% Similarity=0.456 Sum_probs=178.9
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|++.....++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 3 ~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~ 74 (218)
T cd03266 3 TADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGA--GKTTT------LRMLAGLLEPDAGFATVDGFDVVKEPA 74 (218)
T ss_pred EEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCcCCCCceEEECCEEcccCHH
Confidence 4789999986532223699999999988 999999 57665 679999999999999999998865444
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.+||+||++.+|+.+||.||+.++...++.+..+...++.++++.+|+.+..++++.+||||||||+++|||+
T Consensus 75 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral--- 151 (218)
T cd03266 75 EARRRLGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARAL--- 151 (218)
T ss_pred HHHhhEEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHH---
Confidence 56778999999999999999999999877666666666677889999999999999999999999999999865432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 152 -----------------------------------~~~-----------------------------------p~illlD 161 (218)
T cd03266 152 -----------------------------------VHD-----------------------------------PPVLLLD 161 (218)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEc
Confidence 232 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|||+|||+.+++.+++.|+++. .+|+|+|++||+++++..+||++++|.+|++...
T Consensus 162 EPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~ 217 (218)
T cd03266 162 EPTTGLDVMATRALREFIRQLR-----ALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYE 217 (218)
T ss_pred CCCcCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeec
Confidence 9999999999999999999873 3589999999999999999999999999998653
No 70
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-40 Score=329.14 Aligned_cols=208 Identities=28% Similarity=0.419 Sum_probs=176.3
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc---
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD--- 122 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~--- 122 (601)
+++|++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~p~~G~i~~~g~~~~~~~~~ 70 (235)
T cd03261 3 LRGLTKSFGG----RTVLKGVDLDVRRGEILAIIGPSGS--GKSTL------LRLIVGLLRPDSGEVLIDGEDISGLSEA 70 (235)
T ss_pred EEEEEEEECC----EEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEccccChh
Confidence 6899999853 3599999999988 999999 56665 6799999999999999999987532
Q ss_pred -hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 -MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 -~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
....++.+||+||++.+|+.+||.||+.++.... +.++.+...++.++++.+|+.+..++++.+||||||||+++|||
T Consensus 71 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 71 ELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred hHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHH
Confidence 1345678999999999999999999999875533 35555666788899999999998999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
|+ .+ |++
T Consensus 151 l~--------------------------------------~~-----------------------------------p~l 157 (235)
T cd03261 151 LA--------------------------------------LD-----------------------------------PEL 157 (235)
T ss_pred Hh--------------------------------------cC-----------------------------------CCE
Confidence 32 22 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+.++..+++.|+++. +..|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 221 (235)
T cd03261 158 LLYDEPTAGLDPIASGVIDDLIRSLK----KELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTP 221 (235)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHH----HhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCH
Confidence 99999999999999999999999873 22489999999999999999999999999999876643
No 71
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=347.39 Aligned_cols=212 Identities=26% Similarity=0.362 Sum_probs=181.2
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-h
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-M 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~ 123 (601)
.+++|++.|+..+....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 3 ~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGs--GKSTL------lk~L~Gl~~p~~G~I~~~g~~i~~~~~ 74 (343)
T PRK11153 3 ELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGA--GKSTL------IRCINLLERPTSGRVLVDGQDLTALSE 74 (343)
T ss_pred EEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCC--cHHHH------HHHHhCCCCCCceEEEECCEECCcCCH
Confidence 4889999986322245799999999988 999999 56655 5799999999999999999988542 1
Q ss_pred ---HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 124 ---TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 124 ---~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
...++.+||+||++.+|+.+||.||+.|+....+.+..+.+.++.++++.+||.+..++++.+||||||||+++|||
T Consensus 75 ~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 75 KELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred HHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHH
Confidence 23467899999999999999999999998777777766677789999999999999999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +++ |++
T Consensus 155 L--------------------------------------~~~-----------------------------------p~i 161 (343)
T PRK11153 155 L--------------------------------------ASN-----------------------------------PKV 161 (343)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 2 233 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+||||||+|||+.++..++++|+++. +..|+|||++||+++++..+||++++|.+|+++..++
T Consensus 162 LlLDEPts~LD~~~~~~l~~~L~~l~----~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~ 224 (343)
T PRK11153 162 LLCDEATSALDPATTRSILELLKDIN----RELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGT 224 (343)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 99999999999999999999999873 2348999999999999999999999999999876653
No 72
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.4e-40 Score=324.91 Aligned_cols=204 Identities=24% Similarity=0.380 Sum_probs=173.3
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.++++++.|+. ...++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~~l~~~~~~--~~~~il~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~ 72 (216)
T TIGR00960 3 RFEQVSKAYPG--GHQPALDNLNFHITKGEMVFLVGHSGA--GKSTF------LKLILGIEKPTRGKIRFNGQDLTRLRG 72 (216)
T ss_pred EEEEEEEEecC--CCeeEEEeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEehhhcCh
Confidence 47899999853 124699999999988 999999 56665 6799999999999999999987431
Q ss_pred --hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 --MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 --~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
....++.+||+||++.+|+.+||.||+.++....+.+..+..+++.++++.+|+.+..++++.+||||||||+++|||
T Consensus 73 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 73 REIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred hHHHHHHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 123567899999999999999999999988766666555566788999999999999999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 153 l--------------------------------------~~~-----------------------------------p~l 159 (216)
T TIGR00960 153 I--------------------------------------VHK-----------------------------------PPL 159 (216)
T ss_pred H--------------------------------------hcC-----------------------------------CCE
Confidence 3 233 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
+||||||+|||+.++..+++.|+++. .+|.|||++||+++++..+||++++|.+|++
T Consensus 160 lllDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 160 LLADEPTGNLDPELSRDIMRLFEEFN-----RRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999873 3589999999999999999999999999874
No 73
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-40 Score=325.56 Aligned_cols=208 Identities=33% Similarity=0.528 Sum_probs=177.8
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++|+++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 2 ~~~~~~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~~ 69 (220)
T cd03265 2 EVENLVKKYGD----FEAVRGVSFRVRRGEIFGLLGPNGA--GKTTT------IKMLTTLLKPTSGRATVAGHDVVREPR 69 (220)
T ss_pred EEEEEEEEECC----EEeeeceeEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEecCcChH
Confidence 37899999853 4599999999988 999999 56665 579999999999999999998754334
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.+||+||++.+++.+||.||+.++....+.+..+...++.++++.+|+.+..++++.+||||||||+++|+||
T Consensus 70 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al--- 146 (220)
T cd03265 70 EVRRRIGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSL--- 146 (220)
T ss_pred HHhhcEEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHH---
Confidence 55678999999999999999999999987666666666667889999999999889999999999999999865433
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 147 -----------------------------------~~~-----------------------------------p~llllD 156 (220)
T cd03265 147 -----------------------------------VHR-----------------------------------PEVLFLD 156 (220)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEc
Confidence 232 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|||+|||+.+++.+++.|.++. +..|+|||++||+++++..+||++++|.+|+++..++
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~----~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 215 (220)
T cd03265 157 EPTIGLDPQTRAHVWEYIEKLK----EEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGT 215 (220)
T ss_pred CCccCCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCC
Confidence 9999999999999999999873 2238899999999999999999999999999876654
No 74
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=348.30 Aligned_cols=208 Identities=22% Similarity=0.346 Sum_probs=179.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+++|++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|+++....
T Consensus 4 ~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~llGpsGs--GKSTL------Lr~IaGl~~p~~G~I~i~g~~i~~~~- 70 (353)
T PRK10851 4 EIANIKKSFGR----TQVLNDISLDIPSGQMVALLGPSGS--GKTTL------LRIIAGLEHQTSGHIRFHGTDVSRLH- 70 (353)
T ss_pred EEEEEEEEeCC----eEEEEEeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEECCCCC-
Confidence 48899999864 3599999999988 999999 56655 57999999999999999999885422
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhc----CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK----QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
..++.+|||||++.+|+++||.||+.|+.... +.++.+.++++.++++.+||++..++++.+||||||||+++|||
T Consensus 71 ~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArA 150 (353)
T PRK10851 71 ARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARA 150 (353)
T ss_pred HHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHH
Confidence 23568999999999999999999999987642 34556677889999999999999999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
+ +.+ |++
T Consensus 151 L--------------------------------------~~~-----------------------------------P~l 157 (353)
T PRK10851 151 L--------------------------------------AVE-----------------------------------PQI 157 (353)
T ss_pred H--------------------------------------hcC-----------------------------------CCE
Confidence 2 233 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+..+..+++.|+++. +..|+|+|++|||++++..+|||+++|.+|+++..+++
T Consensus 158 lLLDEP~s~LD~~~r~~l~~~L~~l~----~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~ 221 (353)
T PRK10851 158 LLLDEPFGALDAQVRKELRRWLRQLH----EELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTP 221 (353)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999984 23489999999999999999999999999999877654
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=319.40 Aligned_cols=210 Identities=24% Similarity=0.320 Sum_probs=181.1
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC-----eeEEEEc
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS-----SGTAKIY 115 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~-----~G~v~~~ 115 (601)
.++..+++|+.-||+ ..||+|||+++++ +||||| ||||+ .|+++.+.... +|+|.++
T Consensus 5 ~~~~~~~~l~~yYg~----~~aL~~i~l~i~~~~VTAlIGPSGc--GKST~------LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 5 IPAIEVRDLNLYYGD----KHALKDINLDIPKNKVTALIGPSGC--GKSTL------LRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred cceeEecceeEEECc----hhhhccCceeccCCceEEEECCCCc--CHHHH------HHHHHhhcccCcCceEEEEEEEC
Confidence 345568899999874 4599999999988 999999 56665 56888886553 6999999
Q ss_pred cccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC----cccCCccccCC
Q psy7365 116 DHDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP----HKRTSLANTLS 188 (601)
Q Consensus 116 g~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LS 188 (601)
|+++.. +...+|++||+|||.|..|| +|++||++|+....|+..++..+.+++.|....|. +.+++.+..||
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LS 151 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLS 151 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCC
Confidence 999975 46789999999999999998 99999999999999987777888899999888876 45788999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
|||||||+||||+ +
T Consensus 152 GGQQQRLcIARal--------------------------------------A---------------------------- 165 (253)
T COG1117 152 GGQQQRLCIARAL--------------------------------------A---------------------------- 165 (253)
T ss_pred hhHHHHHHHHHHH--------------------------------------h----------------------------
Confidence 9999999865432 1
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
..|++|+||||||+|||.+...+-++|.+++ +..||++|||+|.-+.+..|+++++..|+++..|.+
T Consensus 166 -------v~PeVlLmDEPtSALDPIsT~kIEeLi~eLk------~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T 232 (253)
T COG1117 166 -------VKPEVLLMDEPTSALDPISTLKIEELITELK------KKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPT 232 (253)
T ss_pred -------cCCcEEEecCcccccCchhHHHHHHHHHHHH------hccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCH
Confidence 2369999999999999999999999999984 468999999999999999999999999999988764
No 76
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=349.48 Aligned_cols=209 Identities=26% Similarity=0.360 Sum_probs=180.4
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++....
T Consensus 4 l~i~~l~~~~~~----~~vl~~vsl~i~~Ge~~~l~G~nGs--GKSTL------L~~iaGl~~p~~G~I~~~g~~i~~~~ 71 (369)
T PRK11000 4 VTLRNVTKAYGD----VVISKDINLDIHEGEFVVFVGPSGC--GKSTL------LRMIAGLEDITSGDLFIGEKRMNDVP 71 (369)
T ss_pred EEEEEEEEEeCC----eEEEeeeEEEEcCCCEEEEECCCCC--cHHHH------HHHHhCCCCCCceEEEECCEECCCCC
Confidence 458999999864 4599999999987 999999 56665 57999999999999999999885422
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
. .++.+||+||++.+|+++||.||+.|+....+.+..+.++++.++++.+||.+..++++.+|||||||||++||||
T Consensus 72 ~-~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL-- 148 (369)
T PRK11000 72 P-AERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTL-- 148 (369)
T ss_pred H-hHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHH--
Confidence 2 2467999999999999999999999988776777667778899999999999999999999999999999865433
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |++|||
T Consensus 149 ------------------------------------~~~-----------------------------------P~lLLL 157 (369)
T PRK11000 149 ------------------------------------VAE-----------------------------------PSVFLL 157 (369)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEE
Confidence 232 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||||+|||+.++..+++.|+++. +..|.|+|++|||++++..+||++++|.+|++...+++
T Consensus 158 DEPts~LD~~~~~~l~~~L~~l~----~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~ 218 (369)
T PRK11000 158 DEPLSNLDAALRVQMRIEISRLH----KRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKP 218 (369)
T ss_pred eCCcccCCHHHHHHHHHHHHHHH----HHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999873 23489999999999999999999999999999877654
No 77
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-39 Score=321.33 Aligned_cols=204 Identities=31% Similarity=0.433 Sum_probs=173.3
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
++++++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.... .
T Consensus 3 ~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~p~~G~i~~~g~~~~~~~-~ 69 (213)
T cd03259 3 LKGLSKTYGS----VRALDDLSLTVEPGEFLALLGPSGC--GKTTL------LRLIAGLERPDSGEILIDGRDVTGVP-P 69 (213)
T ss_pred eeeeEEEeCC----eeeecceeEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEECCEEcCcCc-h
Confidence 7899999864 4599999999988 999999 56665 57999999999999999999875422 2
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.++|+||++.+|+.+|++||+.++....+.+....+.++.++++.+|+.+..++++.+||||||||+++||+|
T Consensus 70 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al---- 145 (213)
T cd03259 70 ERRNIGMVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARAL---- 145 (213)
T ss_pred hhccEEEEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHH----
Confidence 3567999999999999999999999876655555555567788999999999989999999999999999865433
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+.+ |+++||||
T Consensus 146 ----------------------------------~~~-----------------------------------p~~lllDE 156 (213)
T cd03259 146 ----------------------------------ARE-----------------------------------PSLLLLDE 156 (213)
T ss_pred ----------------------------------hcC-----------------------------------CCEEEEcC
Confidence 222 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
||+|||+.++..+++.|+++. +..|+|||++||+++++..+||++++|.+|++...
T Consensus 157 Pt~~LD~~~~~~l~~~l~~~~----~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~ 212 (213)
T cd03259 157 PLSALDAKLREELREELKELQ----RELGITTIYVTHDQEEALALADRIAVMNEGRIVQV 212 (213)
T ss_pred CcccCCHHHHHHHHHHHHHHH----HHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEec
Confidence 999999999999999999873 22489999999999999999999999999998654
No 78
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=334.95 Aligned_cols=214 Identities=25% Similarity=0.371 Sum_probs=180.7
Q ss_pred hhhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 50 SLFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
..+++|++.|+... ...++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGa--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~ 74 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGS--GKSTL------IQHLNGLLKPTSGKIIIDGVDITDK 74 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCC--cHHHH------HHHHhcCCCCCccEEEECCEECCCc
Confidence 34889999986322 235799999999988 999999 56655 5799999999999999999988542
Q ss_pred ---hHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC--cccCCccccCChHHHhhhh
Q psy7365 123 ---MTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP--HKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 123 ---~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~LSgG~~qr~~ 196 (601)
....++.+||+||+|. .++..||.||+.|+....+.++++..+++.++++.+||. +..++++.+||||||||++
T Consensus 75 ~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~ 154 (287)
T PRK13637 75 KVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVA 154 (287)
T ss_pred CccHHHHhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHH
Confidence 2356788999999984 444689999999987777788777888899999999997 6789999999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
||||| +.+
T Consensus 155 iAraL--------------------------------------~~~---------------------------------- 162 (287)
T PRK13637 155 IAGVV--------------------------------------AME---------------------------------- 162 (287)
T ss_pred HHHHH--------------------------------------HcC----------------------------------
Confidence 65433 233
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|||||||+|||+.++..++++|+++. +..|+|||++||+++++..+|||+++|.+|+++..+++
T Consensus 163 -P~llllDEPt~gLD~~~~~~l~~~l~~l~----~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~ 229 (287)
T PRK13637 163 -PKILILDEPTAGLDPKGRDEILNKIKELH----KEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTP 229 (287)
T ss_pred -CCEEEEECCccCCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 58999999999999999999999999883 23489999999999999999999999999999887754
No 79
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-39 Score=348.62 Aligned_cols=207 Identities=26% Similarity=0.389 Sum_probs=175.5
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-hH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-MT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~~ 124 (601)
++++.+.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... ..
T Consensus 31 ~~~~~~~~~~----~~~L~~isl~i~~Gei~~LvG~NGs--GKSTL------Lr~I~Gl~~p~sG~I~i~G~~i~~~~~~ 98 (400)
T PRK10070 31 KEQILEKTGL----SLGVKDASLAIEEGEIFVIMGLSGS--GKSTM------VRLLNRLIEPTRGQVLIDGVDIAKISDA 98 (400)
T ss_pred HHHHHhhcCC----eEEEEeEEEEEcCCCEEEEECCCCc--hHHHH------HHHHHcCCCCCCCEEEECCEECCcCCHH
Confidence 5556666532 3489999999988 999999 56665 6799999999999999999998642 21
Q ss_pred H----hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 125 T----IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 125 ~----~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
. .++.+||+||++.+|+++||.||+.|+....+.+..+.++++.++++.+||.+..++++.+||||||||+++|||
T Consensus 99 ~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArA 178 (400)
T PRK10070 99 ELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARA 178 (400)
T ss_pred HHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHH
Confidence 1 245799999999999999999999998877777766667788999999999999999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
|+ .+ |++
T Consensus 179 L~--------------------------------------~~-----------------------------------P~i 185 (400)
T PRK10070 179 LA--------------------------------------IN-----------------------------------PDI 185 (400)
T ss_pred Hh--------------------------------------cC-----------------------------------CCE
Confidence 32 33 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|||||||+|||+.++..+++.|.++. +..|+|||++||+++++..+||++++|.+|+++..++
T Consensus 186 LLLDEPts~LD~~~r~~l~~~L~~l~----~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~ 248 (400)
T PRK10070 186 LLMDEAFSALDPLIRTEMQDELVKLQ----AKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGT 248 (400)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHH----HHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCC
Confidence 99999999999999999999999873 2358999999999999999999999999999876654
No 80
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-39 Score=337.72 Aligned_cols=214 Identities=24% Similarity=0.326 Sum_probs=180.3
Q ss_pred hhhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 50 SLFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+.++||++.|+... ....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGs--GKSTL------l~~L~Gl~~p~~G~i~~~g~~~~~~ 74 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGS--GKTTF------IEHLNALLLPDTGTIEWIFKDEKNK 74 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCC--cHHHH------HHHHhCCCCCCCcEEEEeceecccc
Confidence 45899999986422 234699999999988 999999 56665 579999999999999999876521
Q ss_pred ------------------------chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCC
Q psy7365 122 ------------------------DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGI 176 (601)
Q Consensus 122 ------------------------~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl 176 (601)
.....++.+|||||+|. .++..||+||+.|+....+.++++..+++.++++.+||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL 154 (305)
T PRK13651 75 KKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGL 154 (305)
T ss_pred cccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCC
Confidence 22345778999999973 45568999999998888888888888899999999999
Q ss_pred C-cccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHH
Q psy7365 177 P-HKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALET 255 (601)
Q Consensus 177 ~-~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (601)
. +..++++.+||||||||+++|++| +.+
T Consensus 155 ~~~~~~~~~~~LSgGqkqrvalA~aL--------------------------------------~~~------------- 183 (305)
T PRK13651 155 DESYLQRSPFELSGGQKRRVALAGIL--------------------------------------AME------------- 183 (305)
T ss_pred ChhhhhCChhhCCHHHHHHHHHHHHH--------------------------------------HhC-------------
Confidence 7 789999999999999999865432 222
Q ss_pred HhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEE
Q psy7365 256 LKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIA 335 (601)
Q Consensus 256 ~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~ 335 (601)
|++|||||||+|||+.++..++++|+++. ..|+|||++|||++++..+|||++
T Consensus 184 ----------------------P~lLlLDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tiiivtHd~~~~~~~adrv~ 236 (305)
T PRK13651 184 ----------------------PDFLVFDEPTAGLDPQGVKEILEIFDNLN-----KQGKTIILVTHDLDNVLEWTKRTI 236 (305)
T ss_pred ----------------------CCEEEEeCCCCCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeeCHHHHHHhCCEEE
Confidence 58999999999999999999999999883 358999999999999999999999
Q ss_pred EecCCccccccCcc
Q psy7365 336 IIAAGKLQCCGSSV 349 (601)
Q Consensus 336 vL~~GkIv~~G~~~ 349 (601)
+|.+|+++..+++.
T Consensus 237 vl~~G~i~~~g~~~ 250 (305)
T PRK13651 237 FFKDGKIIKDGDTY 250 (305)
T ss_pred EEECCEEEEECCHH
Confidence 99999998877543
No 81
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=326.00 Aligned_cols=207 Identities=24% Similarity=0.367 Sum_probs=170.5
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
.+.++||++.|++. ++|+|+||++.+ +||||+ ||||| .|+|.|+++|++|+|.++|.++...
T Consensus 4 ~i~v~nl~v~y~~~----~vl~~i~l~v~~G~~~~iiGPNGa--GKSTL------lK~iLGll~p~~G~i~~~g~~~~~~ 71 (254)
T COG1121 4 MIEVENLTVSYGNR----PVLEDISLSVEKGEITALIGPNGA--GKSTL------LKAILGLLKPSSGEIKIFGKPVRKR 71 (254)
T ss_pred EEEEeeeEEEECCE----eeeeccEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCcCCcceEEEcccccccc
Confidence 45699999998743 399999999988 999999 67765 6799999999999999999987543
Q ss_pred hHHhcccEEEEccCCC--CCCCCCHHHHHHHhHhh----cCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhh
Q psy7365 123 MTTIRRSLGVCPQYNA--LFDKLTVEEHMWFYSQL----KQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~--~~~~~tv~e~l~~~~~~----~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
.. +.+||||||... --+.+||+|-+..+... ++...++.+++++++|+.+|+.+++++.+++|||||+||+-
T Consensus 72 ~~--~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~ 149 (254)
T COG1121 72 RK--RLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVL 149 (254)
T ss_pred cc--CCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHH
Confidence 21 468999999763 23458999999987432 22233444788999999999999999999999999999996
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
||||| +++
T Consensus 150 lARAL--------------------------------------~~~---------------------------------- 157 (254)
T COG1121 150 LARAL--------------------------------------AQN---------------------------------- 157 (254)
T ss_pred HHHHh--------------------------------------ccC----------------------------------
Confidence 54433 333
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|+|||||+|+|+.++..++++|++++ .+|+||+++|||++.+...+|+|++|.. ++.+.|++
T Consensus 158 -p~lllLDEP~~gvD~~~~~~i~~lL~~l~-----~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~ 222 (254)
T COG1121 158 -PDLLLLDEPFTGVDVAGQKEIYDLLKELR-----QEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPP 222 (254)
T ss_pred -CCEEEecCCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccCh
Confidence 59999999999999999999999999994 3499999999999999999999999975 44555654
No 82
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.2e-39 Score=320.13 Aligned_cols=205 Identities=27% Similarity=0.383 Sum_probs=171.0
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch--
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM-- 123 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~-- 123 (601)
+++|++.|++.....++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++....
T Consensus 3 ~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGs--GKSTL------l~~i~Gl~~~~~G~i~~~g~~~~~~~~~ 74 (218)
T cd03255 3 LKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGS--GKSTL------LNILGGLDRPTSGEVRVDGTDISKLSEK 74 (218)
T ss_pred EeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCC--CHHHH------HHHHhCCcCCCceeEEECCEehhhcchh
Confidence 789999986422124699999999988 999999 56665 67999999999999999999875321
Q ss_pred --H-HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 124 --T-TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 124 --~-~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
. ..++.+||+||++.+|+.+||+||+.|+....+.+....++++.++++.+||.+..++.+.+||||||||+++|||
T Consensus 75 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~a 154 (218)
T cd03255 75 ELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARA 154 (218)
T ss_pred HHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHH
Confidence 1 1356799999999999999999999998766665555556678899999999988899999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
|+ .+ |++
T Consensus 155 l~--------------------------------------~~-----------------------------------p~l 161 (218)
T cd03255 155 LA--------------------------------------ND-----------------------------------PKI 161 (218)
T ss_pred Hc--------------------------------------cC-----------------------------------CCE
Confidence 32 22 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
+||||||+|||+.++..++++|+++. +..|+|||++||+++++. .||++++|.+|++
T Consensus 162 llLDEP~~~LD~~~~~~l~~~l~~~~----~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 162 ILADEPTGNLDSETGKEVMELLRELN----KEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHH----HhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999999999999999999873 224899999999999987 9999999999874
No 83
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-39 Score=312.96 Aligned_cols=203 Identities=21% Similarity=0.273 Sum_probs=176.3
Q ss_pred cCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccccc-------ccccccccccccC----CcccccccccCCCC
Q psy7365 312 LSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLKN-------SFARGYYLSLDMK----SAPQKSYIGYCPQF 380 (601)
Q Consensus 312 ~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~-------~~g~g~~igld~~----~~~~~~~ig~v~Q~ 380 (601)
+.+..|+ .+++....-++.+++++... +|++++++. +.|..++.|.+.. ....|+++|+|||+
T Consensus 12 fg~~~VL---kgi~l~v~~Gevv~iiGpSG---SGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~ 85 (240)
T COG1126 12 FGDKEVL---KGISLSVEKGEVVVIIGPSG---SGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGMVFQQ 85 (240)
T ss_pred eCCeEEe---cCcceeEcCCCEEEEECCCC---CCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCeeccc
Confidence 4455666 88999999999999998632 566666542 2334434442221 23357899999999
Q ss_pred cccCCCCCHHHHHHHhH-HhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 381 DALNDRLTPREHLEFYS-RVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 381 ~~l~~~lTv~E~L~~~~-~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
.+|||++||.||+.+.. ..++.++.++++.+.++|+++||.+..+.+|.+|||||||||+|||||+.+|+++++|||||
T Consensus 86 fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTS 165 (240)
T COG1126 86 FNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTS 165 (240)
T ss_pred ccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCCCEEeecCCcc
Confidence 99999999999998854 46788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
+|||+...++.+.+++++++|.|.+++||+|.++.++||||++|++|+++.+|+|+++...
T Consensus 166 ALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 166 ALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999998654
No 84
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-39 Score=317.74 Aligned_cols=204 Identities=30% Similarity=0.503 Sum_probs=174.6
Q ss_pred hhcccccccccCCCccceeecceEEeec-----ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP-----LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
.++++++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++......
T Consensus 2 ~~~~~~~~~~~----~~~l~~vs~~i~~g~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 69 (211)
T cd03264 2 QLENLTKRYGK----KRALDGVSLTLGPGMYGLLGPNGA--GKTTL------MRILATLTPPSSGTIRIDGQDVLKQPQK 69 (211)
T ss_pred EEEEEEEEECC----EEEEcceeEEEcCCcEEEECCCCC--CHHHH------HHHHhCCCCCCccEEEECCCccccchHH
Confidence 37889999854 3599999999987 999999 56665 6799999999999999999987543345
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.++|+||++.+|+.+||.||+.+.....+.+..+...++.++++.+|+.+..++++.+||||||||+++||||
T Consensus 70 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al---- 145 (211)
T cd03264 70 LRRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQAL---- 145 (211)
T ss_pred HHhheEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHH----
Confidence 5778999999999999999999999877666665555667788999999999888999999999999999865432
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+.+ |+++||||
T Consensus 146 ----------------------------------~~~-----------------------------------p~llllDE 156 (211)
T cd03264 146 ----------------------------------VGD-----------------------------------PSILIVDE 156 (211)
T ss_pred ----------------------------------hcC-----------------------------------CCEEEEcC
Confidence 232 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
||+|||+.+++.+++.|+++. . +.|+|++||+++++..+|||+++|.+|+++..
T Consensus 157 Pt~~LD~~~~~~l~~~l~~~~-----~-~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~ 210 (211)
T cd03264 157 PTAGLDPEERIRFRNLLSELG-----E-DRIVILSTHIVEDVESLCNQVAVLNKGKLVFE 210 (211)
T ss_pred CcccCCHHHHHHHHHHHHHHh-----C-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999872 2 58999999999999999999999999998654
No 85
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-39 Score=318.62 Aligned_cols=206 Identities=27% Similarity=0.407 Sum_probs=174.6
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+++|++.|++.....++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 3 ~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~---- 70 (220)
T cd03293 3 VRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGC--GKSTL------LRIIAGLERPTSGEVLVDGEPVTG---- 70 (220)
T ss_pred EEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEECcc----
Confidence 689999986422225699999999988 999999 56665 579999999999999999998742
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.+||+||++.+|+.+|+.||+.++....+.+......++.++++.+|+.+..++++.+||||||||+++||||
T Consensus 71 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al---- 146 (220)
T cd03293 71 PGPDRGYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARAL---- 146 (220)
T ss_pred ccCcEEEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHH----
Confidence 3567999999999999999999999877666665555567788999999999989999999999999999865432
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+.+ |+++||||
T Consensus 147 ----------------------------------~~~-----------------------------------p~lllLDE 157 (220)
T cd03293 147 ----------------------------------AVD-----------------------------------PDVLLLDE 157 (220)
T ss_pred ----------------------------------HcC-----------------------------------CCEEEECC
Confidence 233 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec--CCcccccc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA--AGKLQCCG 346 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~--~GkIv~~G 346 (601)
||+|||+.++..++++|+++. +..|+|||++||+++++..+||++++|. +|+++..+
T Consensus 158 Pt~~LD~~~~~~~~~~l~~~~----~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~ 216 (220)
T cd03293 158 PFSALDALTREQLQEELLDIW----RETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEV 216 (220)
T ss_pred CCCCCCHHHHHHHHHHHHHHH----HHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEE
Confidence 999999999999999999873 2348999999999999999999999999 79887654
No 86
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-39 Score=332.48 Aligned_cols=213 Identities=27% Similarity=0.431 Sum_probs=179.5
Q ss_pred hhhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 50 SLFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+.++++++.|++.. ....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++..
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~~~ 73 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGS--GKSTL------LQHLNGLLQPTEGKVTVGDIVVSST 73 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCC--hHHHH------HHHHhcCCCCCCcEEEECCEECccc
Confidence 34899999986322 124699999999988 999999 56665 579999999999999999998742
Q ss_pred ----chHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhh
Q psy7365 122 ----DMTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRK 194 (601)
Q Consensus 122 ----~~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr 194 (601)
.....++.+|||||+| .+| ..||.||+.|+...++.++.+.+.++.++++.+||. +..++.+.+||||||||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqr 152 (288)
T PRK13643 74 SKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRR 152 (288)
T ss_pred cccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHH
Confidence 2345677899999998 355 469999999988887887777788899999999996 57899999999999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
+++|++| +.+
T Consensus 153 vaiA~aL--------------------------------------~~~-------------------------------- 162 (288)
T PRK13643 153 VAIAGIL--------------------------------------AME-------------------------------- 162 (288)
T ss_pred HHHHHHH--------------------------------------HhC--------------------------------
Confidence 9865432 222
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++||||||+|||+.++..++++|.+++ .+|.|||++|||++++..+|||+++|.+|+++..|++.
T Consensus 163 ---p~illLDEPt~gLD~~~~~~l~~~l~~l~-----~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~ 229 (288)
T PRK13643 163 ---PEVLVLDEPTAGLDPKARIEMMQLFESIH-----QSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPS 229 (288)
T ss_pred ---CCEEEEECCccCCCHHHHHHHHHHHHHHH-----HCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 58999999999999999999999999883 35899999999999999999999999999998877543
No 87
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=320.01 Aligned_cols=212 Identities=21% Similarity=0.312 Sum_probs=174.9
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..+++|++.|+......++++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++...
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~i~~~ 76 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGS--GKSTL------LHLLGGLDTPTSGDVIFNGQPMSKL 76 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEEcCcC
Confidence 455899999986422225699999999988 999999 56665 5799999999999999999988542
Q ss_pred -hH---Hh-cccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 123 -MT---TI-RRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 123 -~~---~~-~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
.. .. ++.+||+||++.+|+.+|++||+.|.....+.+..+.++++.++++.+|+.+..++.+.+||||||||+++
T Consensus 77 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~l 156 (233)
T PRK11629 77 SSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAI 156 (233)
T ss_pred CHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHH
Confidence 11 12 36799999999999999999999987655555555666788999999999998999999999999999975
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
||++ +.+
T Consensus 157 a~al--------------------------------------~~~----------------------------------- 163 (233)
T PRK11629 157 ARAL--------------------------------------VNN----------------------------------- 163 (233)
T ss_pred HHHH--------------------------------------hcC-----------------------------------
Confidence 4432 233
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|+++||||||+|||+.++..++++|+++. +..|+|||++||+++++... |++++|.+|+++..+
T Consensus 164 p~lllLDEPt~~LD~~~~~~l~~~l~~~~----~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~i~~~~ 227 (233)
T PRK11629 164 PRLVLADEPTGNLDARNADSIFQLLGELN----RLQGTAFLVVTHDLQLAKRM-SRQLEMRDGRLTAEL 227 (233)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHH----HhCCCEEEEEeCCHHHHHhh-CEEEEEECCEEEEEe
Confidence 58999999999999999999999999873 23589999999999998875 699999999987654
No 88
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.1e-39 Score=316.64 Aligned_cols=205 Identities=27% Similarity=0.360 Sum_probs=174.3
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++....
T Consensus 2 ~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~~G~v~~~g~~~~~~~- 68 (213)
T cd03301 2 ELENVTKRFGN----VTALDDLNLDIADGEFVVLLGPSGC--GKTTT------LRMIAGLEEPTSGRIYIGGRDVTDLP- 68 (213)
T ss_pred EEEeeEEEECC----eeeeeceEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEECCcCC-
Confidence 37899999864 3599999999988 999999 56665 57999999999999999999875321
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.++|+||++.+|+..|+.||+.++....+...++.++++.++++.+|+.+..++++.+||||||||+++||+|
T Consensus 69 ~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral--- 145 (213)
T cd03301 69 PKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAI--- 145 (213)
T ss_pred cccceEEEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHH---
Confidence 12457999999999999999999999876666666666677889999999999999999999999999999765432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 146 -----------------------------------~~~-----------------------------------p~llllD 155 (213)
T cd03301 146 -----------------------------------VRE-----------------------------------PKVFLMD 155 (213)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEc
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|||+|||+.+++.+++.|+++. +..|+|||++||+++++..+||++++|.+|+++..
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~----~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~ 212 (213)
T cd03301 156 EPLSNLDAKLRVQMRAELKRLQ----QRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQI 212 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 9999999999999999999873 22489999999999999999999999999998754
No 89
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.2e-38 Score=317.36 Aligned_cols=208 Identities=48% Similarity=0.734 Sum_probs=177.6
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+++|++.|++. ..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++......
T Consensus 3 ~~~l~~~~~~~--~~~il~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 72 (220)
T cd03263 3 IRNLTKTYKKG--TKPAVDDLSLNVYKGEIFGLLGHNGA--GKTTT------LKMLTGELRPTSGTAYINGYSIRTDRKA 72 (220)
T ss_pred EEeeEEEeCCC--CceeecceEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEecccchHH
Confidence 68999998531 25699999999988 999999 56665 6799999999999999999988544445
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.+||+||++.+|+.+|+.||+.++....+.+..+...++.++++.+||.+..++++.+||||||||+++||+|+
T Consensus 73 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~--- 149 (220)
T cd03263 73 ARQSLGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALI--- 149 (220)
T ss_pred HhhhEEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHh---
Confidence 56789999999999999999999998877667666556677899999999998889999999999999997544322
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
. +|+++||||
T Consensus 150 -----------------------------------~-----------------------------------~p~llllDE 159 (220)
T cd03263 150 -----------------------------------G-----------------------------------GPSVLLLDE 159 (220)
T ss_pred -----------------------------------c-----------------------------------CCCEEEECC
Confidence 2 258999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||+|||+.+++.+++.|+++. ++.|+|++||+++++..+||++++|.+|+++..+++
T Consensus 160 P~~~LD~~~~~~l~~~l~~~~------~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~ 216 (220)
T cd03263 160 PTSGLDPASRRAIWDLILEVR------KGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSP 216 (220)
T ss_pred CCCCCCHHHHHHHHHHHHHHh------cCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCH
Confidence 999999999999999999872 258999999999999999999999999998876543
No 90
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=331.49 Aligned_cols=214 Identities=26% Similarity=0.403 Sum_probs=179.2
Q ss_pred hhhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 50 SLFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
..+++|++.|+... .+..+|+|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|+++..
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~~~ 74 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGS--GKSTL------LQHLNGLLQPTSGTVTIGERVITAG 74 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCC--cHHHH------HHHHhcCCCCCCcEEEECCEECccc
Confidence 34899999986422 135699999999988 999999 56655 579999999999999999998842
Q ss_pred ----chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhh
Q psy7365 122 ----DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 122 ----~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~ 195 (601)
.....++.+|||||+|. .++..||.||+.|+....+.++++.+++++++++.+||. +..++++.+||||||||+
T Consensus 75 ~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv 154 (290)
T PRK13634 75 KKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRV 154 (290)
T ss_pred cccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHH
Confidence 23456678999999983 333679999999988777777777778899999999997 678999999999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
+|||+| +.+
T Consensus 155 ~lAraL--------------------------------------~~~--------------------------------- 163 (290)
T PRK13634 155 AIAGVL--------------------------------------AME--------------------------------- 163 (290)
T ss_pred HHHHHH--------------------------------------HcC---------------------------------
Confidence 865432 232
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. +..|.|||++||+++++..+|||+++|.+|+++..+++
T Consensus 164 --P~llllDEPt~~LD~~~~~~l~~~L~~l~----~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 164 --PEVLVLDEPTAGLDPKGRKEMMEMFYKLH----KEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred --CCEEEEECCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 58999999999999999999999999873 23489999999999999999999999999999887754
No 91
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=328.91 Aligned_cols=211 Identities=22% Similarity=0.302 Sum_probs=179.2
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+..+++|++.|+. ..++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 4 ~l~~~~l~~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~ 72 (274)
T PRK13647 4 IIEVEDLHFRYKD---GTKALKGLSLSIPEGSKTALLGPNGA--GKSTL------LLHLNGIYLPQRGRVKVMGREVNAE 72 (274)
T ss_pred eEEEEEEEEEeCC---CCeeeeeEEEEEcCCCEEEEECCCCC--cHHHH------HHHHhcCCCCCceEEEECCEECCCC
Confidence 3458999999842 24599999999988 999999 56665 579999999999999999998854
Q ss_pred chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 122 DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
....+++.+||+||+|. .++..||.||+.|+....+.++.+.++++.++++.+||.+..++++.+||||||||+++|||
T Consensus 73 ~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~lara 152 (274)
T PRK13647 73 NEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGV 152 (274)
T ss_pred CHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHH
Confidence 23445678999999984 55678999999988766667766677788999999999999999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 153 L--------------------------------------~~~-----------------------------------p~l 159 (274)
T PRK13647 153 L--------------------------------------AMD-----------------------------------PDV 159 (274)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 2 233 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+.++..++++|++++ .+|+|||++||+++++.++|||+++|.+|+++..+.+
T Consensus 160 lllDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~ 222 (274)
T PRK13647 160 IVLDEPMAYLDPRGQETLMEILDRLH-----NQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDK 222 (274)
T ss_pred EEEECCCcCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999873 2489999999999999999999999999999877654
No 92
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.4e-38 Score=315.59 Aligned_cols=202 Identities=28% Similarity=0.431 Sum_probs=171.4
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.++++++.|+. +.++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~~l~~~~~~---~~~il~~is~~i~~G~~~~l~G~nGs--GKSTL------l~~i~Gl~~~~~G~i~~~g~~~~~~~~ 71 (214)
T TIGR02673 3 EFHNVSKAYPG---GVAALHDVSLHIRKGEFLFLTGPSGA--GKTTL------LKLLYGALTPSRGQVRIAGEDVNRLRG 71 (214)
T ss_pred EEEeeeEEeCC---CceeecceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEEcccCCH
Confidence 47899999841 24699999999988 999999 56655 5799999999999999999988532
Q ss_pred --hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 --MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 --~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
....++.+||+||++.+|+.+|+.||+.++....+.+....+.++.++++.+|+.+..++.+.+||||||||+++||+
T Consensus 72 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 72 RQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred HHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 123567899999999999999999999987665565555556788999999999988899999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 152 l--------------------------------------~~~-----------------------------------p~l 158 (214)
T TIGR02673 152 I--------------------------------------VNS-----------------------------------PPL 158 (214)
T ss_pred H--------------------------------------hCC-----------------------------------CCE
Confidence 2 222 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
+||||||+|||+.++..+++.|+++. .+|+|+|++||+++++..+||++++|.+|+
T Consensus 159 llLDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 159 LLADEPTGNLDPDLSERILDLLKRLN-----KRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999873 358999999999999999999999999885
No 93
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.4e-38 Score=336.25 Aligned_cols=216 Identities=17% Similarity=0.242 Sum_probs=181.4
Q ss_pred hhhhhcccccccccCC---------CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEE
Q psy7365 48 YVSLFESLSENRDKLG---------IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTA 112 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v 112 (601)
++..++||++.|+..+ ....+++|+||++.+ +|+||| ||||| .++|+|+++|++|+|
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGs--GKSTL------lk~i~Gl~~p~~G~I 78 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGC--GKSTF------ARAIIGLVKATDGEV 78 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCC--CHHHH------HHHHHCCCCCCCcEE
Confidence 3566999999996422 236799999999988 999999 56655 569999999999999
Q ss_pred EEccccCCCc----hHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhc--CCChHHHHHHHHHHHHHcCCC-cccCCc
Q psy7365 113 KIYDHDIRTD----MTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLK--QVPKDLAQLEISNMIGDLGIP-HKRTSL 183 (601)
Q Consensus 113 ~~~g~~~~~~----~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~--~~~~~~~~~~~~~~l~~~gl~-~~~~~~ 183 (601)
.++|.++... ...+++.++||||+| .+++.+||.||+.+....+ ++++++.++++.++++.+||. +..+++
T Consensus 79 ~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~ 158 (331)
T PRK15079 79 AWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRY 158 (331)
T ss_pred EECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCC
Confidence 9999998542 223567899999998 5888999999999876554 366677778889999999995 568999
Q ss_pred cccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchh
Q psy7365 184 ANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSI 263 (601)
Q Consensus 184 ~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 263 (601)
+.+||||||||++||+|| +.+
T Consensus 159 p~~LSgG~~QRv~iArAL--------------------------------------~~~--------------------- 179 (331)
T PRK15079 159 PHEFSGGQCQRIGIARAL--------------------------------------ILE--------------------- 179 (331)
T ss_pred cccCCHHHHHHHHHHHHH--------------------------------------hcC---------------------
Confidence 999999999999754432 233
Q ss_pred HHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccc
Q psy7365 264 LVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQ 343 (601)
Q Consensus 264 ~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv 343 (601)
|++||+||||++||+.++..++++|++++ +..|.|+|++|||++++..+|||+++|.+|+++
T Consensus 180 --------------P~llilDEPts~LD~~~~~~i~~lL~~l~----~~~~~til~iTHdl~~~~~~~dri~vl~~G~iv 241 (331)
T PRK15079 180 --------------PKLIICDEPVSALDVSIQAQVVNLLQQLQ----REMGLSLIFIAHDLAVVKHISDRVLVMYLGHAV 241 (331)
T ss_pred --------------CCEEEEeCCCccCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 58999999999999999999999999984 234899999999999999999999999999999
Q ss_pred cccCc
Q psy7365 344 CCGSS 348 (601)
Q Consensus 344 ~~G~~ 348 (601)
..++.
T Consensus 242 e~g~~ 246 (331)
T PRK15079 242 ELGTY 246 (331)
T ss_pred EEcCH
Confidence 87764
No 94
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-38 Score=319.37 Aligned_cols=212 Identities=25% Similarity=0.348 Sum_probs=177.6
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-h
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-M 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~ 123 (601)
.+++|++.|++.....++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 3 ~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 74 (233)
T cd03258 3 ELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGA--GKSTL------IRCINGLERPTSGSVLVDGTDLTLLSG 74 (233)
T ss_pred EEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEEcccCCH
Confidence 4789999986432123699999999988 999999 56665 5799999999999999999987542 1
Q ss_pred ---HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 124 ---TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 124 ---~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
...++.+||+||++.+|+.+|+.||+.+.....+.+......++.++++.+|+.+..++++.+||||||||+++|++
T Consensus 75 ~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 75 KELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred HHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHH
Confidence 23467899999999999999999999987665565555556678899999999999999999999999999975443
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +. +|++
T Consensus 155 l--------------------------------------~~-----------------------------------~p~l 161 (233)
T cd03258 155 L--------------------------------------AN-----------------------------------NPKV 161 (233)
T ss_pred H--------------------------------------hc-----------------------------------CCCE
Confidence 2 22 2589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+||||||+|||+.++..+++.|+++. +..|+|||++||+++++..+||++++|.+|+++..+.
T Consensus 162 llLDEP~~~LD~~~~~~l~~~l~~~~----~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 224 (233)
T cd03258 162 LLCDEATSALDPETTQSILALLRDIN----RELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGT 224 (233)
T ss_pred EEecCCCCcCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999873 2248999999999999999999999999999987664
No 95
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.8e-38 Score=319.29 Aligned_cols=207 Identities=27% Similarity=0.403 Sum_probs=173.3
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-hH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-MT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~~ 124 (601)
+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... ..
T Consensus 3 ~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 70 (236)
T cd03219 3 VRGLTKRFGG----LVALDDVSFSVRPGEIHGLIGPNGA--GKTTL------FNLISGFLRPTSGSVLFDGEDITGLPPH 70 (236)
T ss_pred eeeeEEEECC----EEEecCceEEecCCcEEEEECCCCC--CHHHH------HHHHcCCCCCCCceEEECCEECCCCCHH
Confidence 6889999853 4599999999988 999999 56665 5799999999999999999987542 22
Q ss_pred H-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC----------ChHHHHHHHHHHHHHcCCCcccCCccccCChHHHh
Q psy7365 125 T-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV----------PKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQR 193 (601)
Q Consensus 125 ~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~----------~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~q 193 (601)
. .+..+||+||++.+|+.+||.||+.++....+. +..+...++.++++.+|+.+..++++.+|||||||
T Consensus 71 ~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 71 EIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQR 150 (236)
T ss_pred HHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHH
Confidence 2 346799999999999999999999987654322 23445567889999999999899999999999999
Q ss_pred hhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhh
Q psy7365 194 KLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAM 273 (601)
Q Consensus 194 r~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 273 (601)
|+++|||| +.+
T Consensus 151 rv~la~al--------------------------------------~~~------------------------------- 161 (236)
T cd03219 151 RLEIARAL--------------------------------------ATD------------------------------- 161 (236)
T ss_pred HHHHHHHH--------------------------------------hcC-------------------------------
Confidence 99754432 222
Q ss_pred ccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 274 SFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 274 ~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|+++. ..|+|+|++||+++++..+||++++|.+|++...+++
T Consensus 162 ----p~llllDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 162 ----PKLLLLDEPAAGLNPEETEELAELIRELR-----ERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred ----CCEEEEcCCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 58999999999999999999999999873 2589999999999999999999999999998776543
No 96
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7.7e-39 Score=343.01 Aligned_cols=231 Identities=26% Similarity=0.409 Sum_probs=187.2
Q ss_pred cccccccCCeeeeecCCCCCCccchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhH
Q psy7365 24 ANIHKISGSEVTYVLPQDPASMGAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVS 97 (601)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~ 97 (601)
.|+-|++|......++...+..+ =.++.+.|+. ..+++|+||++.+ +||||| |||||
T Consensus 4 ~~~~k~fg~~~~~~~~~~~~g~~-----~~~~~~~~g~----~~~l~~vsf~i~~Gei~~I~G~nGs--GKSTL------ 66 (382)
T TIGR03415 4 KNVDVVFGDQPAEALALLDQGKT-----REEILDETGL----VVGVANASLDIEEGEICVLMGLSGS--GKSSL------ 66 (382)
T ss_pred EeeEEeeCCCHHHHHHHHHcCCC-----HHHHHHhhCC----EEEEEeeEEEEcCCCEEEEECCCCC--cHHHH------
Confidence 46778888765555443322222 1234466554 4489999999988 999999 56655
Q ss_pred HHhccCCCCCCeeEEEEccc----cCCC-ch---HHh-cccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHH
Q psy7365 98 RSMLMGMLPVSSGTAKIYDH----DIRT-DM---TTI-RRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEIS 168 (601)
Q Consensus 98 ~~~l~Gl~~~~~G~v~~~g~----~~~~-~~---~~~-~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~ 168 (601)
.++|+|+++|++|+|+++|. ++.. +. ... ++.+||+||++.+|+++||.||+.|+....++++.+.+.++.
T Consensus 67 lr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~ 146 (382)
T TIGR03415 67 LRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVD 146 (382)
T ss_pred HHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 57999999999999999996 4432 11 122 358999999999999999999999998777777777778899
Q ss_pred HHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhh
Q psy7365 169 NMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTH 248 (601)
Q Consensus 169 ~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~ 248 (601)
++++.+||.+..++++.+||||||||+++||+|+ ++
T Consensus 147 e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa--------------------------------------~~------ 182 (382)
T TIGR03415 147 EQLELVGLAQWADKKPGELSGGMQQRVGLARAFA--------------------------------------MD------ 182 (382)
T ss_pred HHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHh--------------------------------------cC------
Confidence 9999999999999999999999999998654332 32
Q ss_pred HHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHH
Q psy7365 249 KQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEAD 328 (601)
Q Consensus 249 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~ 328 (601)
|++|||||||++|||.++..+++.|.++. +..|+|+|++|||++++.
T Consensus 183 -----------------------------P~ILLlDEPts~LD~~~r~~l~~~L~~l~----~~~~~TII~iTHdl~e~~ 229 (382)
T TIGR03415 183 -----------------------------ADILLMDEPFSALDPLIRTQLQDELLELQ----AKLNKTIIFVSHDLDEAL 229 (382)
T ss_pred -----------------------------CCEEEEECCCccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHH
Confidence 58999999999999999999999999884 234899999999999999
Q ss_pred hcCCEEEEecCCccccccCc
Q psy7365 329 LLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 329 ~l~Drv~vL~~GkIv~~G~~ 348 (601)
++|||+++|.+|+++..|++
T Consensus 230 ~l~DrI~vl~~G~iv~~g~~ 249 (382)
T TIGR03415 230 KIGNRIAIMEGGRIIQHGTP 249 (382)
T ss_pred HhCCEEEEEECCEEEEecCH
Confidence 99999999999999877654
No 97
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.8e-37 Score=360.59 Aligned_cols=296 Identities=23% Similarity=0.338 Sum_probs=222.7
Q ss_pred CCCCCCHHHHHHHhHhhcCCChH----------HHHHHHHHHHHHcCCCcc-cCCccccCChHHHhhhhchhhhcchhhH
Q psy7365 139 LFDKLTVEEHMWFYSQLKQVPKD----------LAQLEISNMIGDLGIPHK-RTSLANTLSGGMQRKLDNVKVWFNNKAW 207 (601)
Q Consensus 139 ~~~~~tv~e~l~~~~~~~~~~~~----------~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~~qr~~~~~~~~~~~~~ 207 (601)
.+..++|.|.+.| .+..+.++. ++..+++ +++.+||.+. .++++.+|||||+|||.||++|.
T Consensus 433 ~~~~~~v~~~~~~-~~~~~~~~~~~~~a~~~~~~i~~rl~-~L~~vGL~~l~l~r~~~~LSgGE~QRv~LA~aL~----- 505 (943)
T PRK00349 433 EVSELSIGEALEF-FENLKLSEQEAKIAEPILKEIRERLK-FLVDVGLDYLTLSRSAGTLSGGEAQRIRLATQIG----- 505 (943)
T ss_pred HHhcCcHHHHHHH-HHhcCCChHHHHHHHHHHHHHHHHHH-HhhccccCCCCCCCchhhCCHHHHHHHHHHHHHh-----
Confidence 4568999999999 455555542 3445554 7999999876 89999999999999998654322
Q ss_pred HHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCC
Q psy7365 208 IAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPT 287 (601)
Q Consensus 208 ~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPt 287 (601)
.+| .|+++||||||
T Consensus 506 ---------------------------------~~~---------------------------------~~~llILDEPt 519 (943)
T PRK00349 506 ---------------------------------SGL---------------------------------TGVLYVLDEPS 519 (943)
T ss_pred ---------------------------------hCC---------------------------------CCcEEEecCCc
Confidence 111 14899999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEe------cCCccccccCcccc----------
Q psy7365 288 SGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAII------AAGKLQCCGSSVFL---------- 351 (601)
Q Consensus 288 sgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL------~~GkIv~~G~~~lL---------- 351 (601)
+||||..+..++++|+++. ..|.|||++||+++++. .||++++| .+|+++..|++..+
T Consensus 520 agLd~~~~~~L~~~L~~L~-----~~G~TVIvVeH~~~~i~-~aD~vi~LgpgaG~~~G~iv~~g~~~e~~~~~~~l~~~ 593 (943)
T PRK00349 520 IGLHQRDNDRLIETLKHLR-----DLGNTLIVVEHDEDTIR-AADYIVDIGPGAGVHGGEVVASGTPEEIMKNPNSLTGQ 593 (943)
T ss_pred cCCCHHHHHHHHHHHHHHH-----hCCCEEEEEeCCHHHHH-hCCEEEEeccccCCCCCEEeeccCHHHHhcChhheeeh
Confidence 9999999999999999983 45999999999999976 69999999 67787654321000
Q ss_pred --------------cc-c--c------------------------------cccc------c------------------
Q psy7365 352 --------------KN-S--F------------------------------ARGY------Y------------------ 360 (601)
Q Consensus 352 --------------k~-~--~------------------------------g~g~------~------------------ 360 (601)
.. . . |.|. .
T Consensus 594 ~l~~~~~~~~~~~~~~~~~~~L~v~~l~~~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~ 673 (943)
T PRK00349 594 YLSGKKKIEVPKERRKGNGKFLKLKGARENNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGK 673 (943)
T ss_pred hhcccccccccccccCCCcceEEecCCccCCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCC
Confidence 00 0 0 0000 0
Q ss_pred ----ccccc----------------CC------------------cccccccccCCCCcccC------------------
Q psy7365 361 ----LSLDM----------------KS------------------APQKSYIGYCPQFDALN------------------ 384 (601)
Q Consensus 361 ----igld~----------------~~------------------~~~~~~ig~v~Q~~~l~------------------ 384 (601)
.+.+. ++ .+..+..||.++..++.
T Consensus 674 ~~~~~g~~~~~~~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~ 753 (943)
T PRK00349 674 HKEIEGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIE 753 (943)
T ss_pred CcccccccCCCceEEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEE
Confidence 00000 00 00001233433322211
Q ss_pred ------------------------------------CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCc-ccccc
Q psy7365 385 ------------------------------------DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGH-YSDRE 427 (601)
Q Consensus 385 ------------------------------------~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~-~~~~~ 427 (601)
..+|+.|++.|+..+.+. ....+.|+.+||.. ..+++
T Consensus 754 ~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i------~~~l~~L~~vgL~~l~l~~~ 827 (943)
T PRK00349 754 MHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKI------ARKLQTLVDVGLGYIKLGQP 827 (943)
T ss_pred eccCCCccccCccccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhh------hHHHHHHHHCCCCcccccCC
Confidence 137899999887655332 23467899999986 57899
Q ss_pred cCcCChHHHHHHHHHHHHhCCC---CEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEE-
Q psy7365 428 VRTLSGGNKRKLSTAIALLGNT---PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM- 503 (601)
Q Consensus 428 ~~~LSgGqkQRl~lA~AL~~~P---~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL- 503 (601)
+.+||||||||+.||++|+.+| +++||||||+|||+..++.++++|+++.++|.|||++||+++++. .||+|+.|
T Consensus 828 ~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~-~aD~ii~Lg 906 (943)
T PRK00349 828 ATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK-TADWIIDLG 906 (943)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH-hCCEEEEec
Confidence 9999999999999999999999 999999999999999999999999999888999999999999986 69999999
Q ss_pred -----eCCEEEEecCHHHHHHH
Q psy7365 504 -----VNGQFTCLGSATHLKSK 520 (601)
Q Consensus 504 -----~~G~iv~~G~~~~L~~~ 520 (601)
++|++++.|+++++.+.
T Consensus 907 p~~G~~~G~Iv~~Gt~~el~~~ 928 (943)
T PRK00349 907 PEGGDGGGEIVATGTPEEVAKV 928 (943)
T ss_pred CCcCCCCCEEEEeCCHHHHHhC
Confidence 79999999999998753
No 98
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2e-38 Score=316.53 Aligned_cols=205 Identities=23% Similarity=0.323 Sum_probs=173.9
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.++++++.|.. ..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~i~~~~~ 71 (222)
T PRK10908 3 RFEHVSKAYLG---GRQALQGVTFHMRPGEMAFLTGHSGA--GKSTL------LKLICGIERPSAGKIWFSGHDITRLKN 71 (222)
T ss_pred EEEeeEEEecC---CCeEEeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEcccCCh
Confidence 47899999831 24699999999988 999999 56665 5799999999999999999987531
Q ss_pred --hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 --MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 --~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
....++.++|+||++.+|+.+|+.||+.+.....+.+.++...++.++++.+|+.+..++.+.+||||||||+++||+
T Consensus 72 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lara 151 (222)
T PRK10908 72 REVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARA 151 (222)
T ss_pred hHHHHHHhheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHH
Confidence 123467899999999998999999999987766666666666778899999999988999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 152 l--------------------------------------~~~-----------------------------------p~l 158 (222)
T PRK10908 152 V--------------------------------------VNK-----------------------------------PAV 158 (222)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 2 233 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQC 344 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~ 344 (601)
+||||||+|||+.++..++++|.++. .+|.|+|++||+++++..+||++++|.+|+++.
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 159 LLADEPTGNLDDALSEGILRLFEEFN-----RVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999873 347899999999999999999999999998754
No 99
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.3e-38 Score=317.83 Aligned_cols=206 Identities=30% Similarity=0.455 Sum_probs=174.6
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-hH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-MT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~~ 124 (601)
+++|++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... ..
T Consensus 3 ~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 70 (232)
T cd03218 3 AENLSKRYGK----RKVVNGVSLSVKQGEIVGLLGPNGA--GKTTT------FYMIVGLVKPDSGKILLDGQDITKLPMH 70 (232)
T ss_pred EEEEEEEeCC----EEeeccceeEecCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEecccCCHh
Confidence 6899999853 4599999999988 999999 57665 6799999999999999999987532 22
Q ss_pred H-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 125 T-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 125 ~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
. .++.+||+||++.+|+.+|+.||+.++....+....+...++.++++.+|+.+..++.+.+||||||||+++|+|
T Consensus 71 ~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~a--- 147 (232)
T cd03218 71 KRARLGIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARA--- 147 (232)
T ss_pred HHHhccEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHH---
Confidence 2 346799999999999999999999987655555555556678899999999999999999999999999975443
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
++.+ |++|||
T Consensus 148 -----------------------------------l~~~-----------------------------------p~llll 157 (232)
T cd03218 148 -----------------------------------LATN-----------------------------------PKFLLL 157 (232)
T ss_pred -----------------------------------HhcC-----------------------------------CCEEEe
Confidence 2233 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
||||+|||+.+++.++++|+++. ..|+|+|++||+++++..+||++++|.+|++...++
T Consensus 158 DEPt~~LD~~~~~~~~~~l~~~~-----~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 216 (232)
T cd03218 158 DEPFAGVDPIAVQDIQKIIKILK-----DRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGT 216 (232)
T ss_pred cCCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeC
Confidence 99999999999999999999873 358999999999999999999999999999876654
No 100
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8e-38 Score=307.20 Aligned_cols=269 Identities=20% Similarity=0.362 Sum_probs=216.0
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccc-------cccccccccccccccCCcccccccccCCCCcccCCC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF-------LKNSFARGYYLSLDMKSAPQKSYIGYCPQFDALNDR 386 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l-------Lk~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~~~ 386 (601)
.++++ .++++...-+....+++... .|+++. +.++.|+..+.+.+.. ...+.+|||+|++.++|+.
T Consensus 14 ~k~av---~~isf~v~~G~i~GllG~NG---AGKTTtfRmILglle~~~G~I~~~g~~~~-~~~~~rIGyLPEERGLy~k 86 (300)
T COG4152 14 DKKAV---DNISFEVPPGEIFGLLGPNG---AGKTTTFRMILGLLEPTEGEITWNGGPLS-QEIKNRIGYLPEERGLYPK 86 (300)
T ss_pred ceeee---cceeeeecCCeEEEeecCCC---CCccchHHHHhccCCccCceEEEcCcchh-hhhhhhcccChhhhccCcc
Confidence 45555 78888888888888887422 333332 3344444444443332 2356789999999999999
Q ss_pred CCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHH
Q psy7365 387 LTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGAR 466 (601)
Q Consensus 387 lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~ 466 (601)
+||.|.+.|++.++|++..+.++.+..||+++++..+..+++.+||.||+||+.+..+++|+|+++|||||+|||||.+.
T Consensus 87 ~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~ 166 (300)
T COG4152 87 MTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNV 166 (300)
T ss_pred CcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEecCCCchhHHHHHhhc
Q psy7365 467 RFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCAEGRSADAQTYLSLN 546 (601)
Q Consensus 467 ~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~~~~~~~~~~~l~~~ 546 (601)
+.+.+.|.+++++|.|||+|||.|+.++++||++++|++|+.+.+|+.+++++.+++.. +.+.-+ ...+++ ..
T Consensus 167 elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~Gkk~-~~ies~-~s~eeL-----~~ 239 (300)
T COG4152 167 ELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSFGKKR-LVIESD-LSLEEL-----AN 239 (300)
T ss_pred HHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhcCCce-EEEecc-CchHHH-----hc
Confidence 99999999999999999999999999999999999999999999999999999998753 334422 111222 24
Q ss_pred CCCceeEEe-eCcEEEEEEcCCcccHHHHHHHHHHccccCCCeeEEEecCCCCCCC
Q psy7365 547 LPVADLVET-HATQLQYRISGAVSDLGALFRTLESAKTEAGLIVDYSLSQTSLEDS 601 (601)
Q Consensus 547 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~i~~~~v~~~sLEdv 601 (601)
+|++...+. ..+.+.+.+.+ +.....+|+.+...+. |..|+...|||+|+
T Consensus 240 ipgi~~~~~~~~G~~~i~ie~-e~~a~~ifq~~a~~g~----i~~Fe~~~PsL~di 290 (300)
T COG4152 240 IPGILKITETKDGSWRIQIEN-ETVAREIFQEVARDGY----IQRFELQEPSLHDI 290 (300)
T ss_pred CCCceeeeeccCCceEeeccc-chHHHHHHHHHhccce----eEEEeecCCCHHHH
Confidence 677765554 23344444443 3456678888865432 89999999999985
No 101
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-38 Score=314.11 Aligned_cols=201 Identities=26% Similarity=0.440 Sum_probs=172.8
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
++++++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. .
T Consensus 3 ~~~l~~~~~~----~~~l~~v~~~i~~G~~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~---~ 67 (210)
T cd03269 3 VENVTKRFGR----VTALDDISFSVEKGEIFGLLGPNGA--GKTTT------IRMILGIILPDSGEVLFDGKPLDI---A 67 (210)
T ss_pred EEEEEEEECC----EEEEeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCCchhH---H
Confidence 7899999853 4599999999988 999999 57665 679999999999999999988742 3
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.++|+||++.+|+.+|+.||+.++...++.+..+..+++.++++.+|+++..++++.+||||||||+++|++|
T Consensus 68 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al---- 143 (210)
T cd03269 68 ARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAV---- 143 (210)
T ss_pred HHccEEEeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHH----
Confidence 4668999999999999999999999877666666566667889999999999889999999999999999754322
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+. +|+++||||
T Consensus 144 ----------------------------------~~-----------------------------------~p~~lllDE 154 (210)
T cd03269 144 ----------------------------------IH-----------------------------------DPELLILDE 154 (210)
T ss_pred ----------------------------------hc-----------------------------------CCCEEEEeC
Confidence 22 258999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
||+|||+.++..+++.|+++. .+|+|||++||+.+++..+||++++|.+|++...
T Consensus 155 P~~~LD~~~~~~~~~~l~~~~-----~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~ 209 (210)
T cd03269 155 PFSGLDPVNVELLKDVIRELA-----RAGKTVILSTHQMELVEELCDRVLLLNKGRAVLY 209 (210)
T ss_pred CCcCCCHHHHHHHHHHHHHHH-----HCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEec
Confidence 999999999999999999873 3478999999999999999999999999997643
No 102
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=328.30 Aligned_cols=212 Identities=23% Similarity=0.327 Sum_probs=180.4
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..+++|++.|++.+ ..++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. .
T Consensus 5 l~~~~l~~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~~~~ 75 (279)
T PRK13650 5 IEVKNLTFKYKEDQ-EKYTLNDVSFHVKQGEWLSIIGHNGS--GKSTT------VRLIDGLLEAESGQIIIDGDLLTEEN 75 (279)
T ss_pred EEEEeEEEEcCCCC-cCeeeeeeEEEEeCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCcEEEECCEECCcCc
Confidence 45899999986422 24599999999988 999999 56655 579999999999999999999854 3
Q ss_pred hHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 123 MTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
...+++.+||+||+|. +++..||.||+.|+....+.++++..+++.++++.+||.+..++.+.+||||||||+++||||
T Consensus 76 ~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral 155 (279)
T PRK13650 76 VWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAV 155 (279)
T ss_pred HHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 3456678999999984 778899999999987777777777778899999999999999999999999999999865433
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+ .+ |++|
T Consensus 156 ~--------------------------------------~~-----------------------------------p~lL 162 (279)
T PRK13650 156 A--------------------------------------MR-----------------------------------PKII 162 (279)
T ss_pred H--------------------------------------cC-----------------------------------CCEE
Confidence 2 32 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||||||+|||+.++..+++.|+++. +..|+|||++||+++++. .|||+++|.+|+++..+++
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~l~----~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~~g~~ 224 (279)
T PRK13650 163 ILDEATSMLDPEGRLELIKTIKGIR----DDYQMTVISITHDLDEVA-LSDRVLVMKNGQVESTSTP 224 (279)
T ss_pred EEECCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999883 224899999999999984 7999999999999877654
No 103
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.8e-38 Score=313.14 Aligned_cols=202 Identities=27% Similarity=0.412 Sum_probs=172.0
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc---
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD--- 122 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~--- 122 (601)
++++++.|+.. .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~l~~~~~~~---~~~l~~~sl~i~~G~~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~i~~~~~~ 71 (214)
T cd03292 3 FINVTKTYPNG---TAALDGINISISAGEFVFLVGPSGA--GKSTL------LKLIYKEELPTSGTIRVNGQDVSDLRGR 71 (214)
T ss_pred EEEEEEEeCCC---ceeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEEcccCCHH
Confidence 68899998431 4599999999988 999999 56665 6799999999999999999987532
Q ss_pred -hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 123 -MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 123 -~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
....++.++|+||++.+|+.+|+.||+.++....+.+.++..+++.++++.+|+++..++++.+||||||||+++||++
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 72 AIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred HHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 1235678999999999999999999999887665655556667889999999999989999999999999999754432
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+.+ |+++
T Consensus 152 --------------------------------------~~~-----------------------------------p~ll 158 (214)
T cd03292 152 --------------------------------------VNS-----------------------------------PTIL 158 (214)
T ss_pred --------------------------------------HcC-----------------------------------CCEE
Confidence 232 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
||||||+|||+.++..+++.|+++. .+|+|+|++||+.+++..+||++++|.+|++
T Consensus 159 llDEPt~~LD~~~~~~~~~~l~~~~-----~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 159 IADEPTGNLDPDTTWEIMNLLKKIN-----KAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEeCCCCcCCHHHHHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999872 3589999999999999999999999999874
No 104
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.5e-38 Score=313.09 Aligned_cols=202 Identities=30% Similarity=0.440 Sum_probs=169.3
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
+++|++.|++. ..++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. +..
T Consensus 2 ~~~l~~~~~~~--~~~il~~vs~~i~~G~~~~l~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 71 (211)
T cd03225 2 LKNLSFSYPDG--ARPALDDISLTIKKGEFVLIVGPNGS--GKSTL------LRLLNGLLGPTSGEVLVDGKDLTKLSLK 71 (211)
T ss_pred ceeEEEecCCC--CeeeecceEEEEcCCcEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCEEcccCCHH
Confidence 67899998641 24599999999988 999999 56665 579999999999999999998754 234
Q ss_pred HhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 125 TIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
..++.++|+||++. .++.+|+.||+.++....+........++.++++.+|+.+..++++.+||||||||+++||||
T Consensus 72 ~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral-- 149 (211)
T cd03225 72 ELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVL-- 149 (211)
T ss_pred HHHhhceEEecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHH--
Confidence 45678999999985 467899999998876555555555566788999999999888999999999999999754432
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |+++||
T Consensus 150 ------------------------------------~~~-----------------------------------p~llll 158 (211)
T cd03225 150 ------------------------------------AMD-----------------------------------PDILLL 158 (211)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEE
Confidence 233 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
||||+|||+.++..+++.|.++. .+|.|||++||+++++..+||++++|.+|+
T Consensus 159 DEPt~~LD~~~~~~~~~~l~~~~-----~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 159 DEPTAGLDPAGRRELLELLKKLK-----AEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999873 248999999999999999999999999884
No 105
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.9e-38 Score=313.48 Aligned_cols=200 Identities=25% Similarity=0.428 Sum_probs=170.3
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 2 ~~~~l~~~~~~----~~~l~~~~~~i~~G~~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~-~ 68 (208)
T cd03268 2 KTNDLTKTYGK----KRVLDDISLHVKKGEIYGFLGPNGA--GKTTT------MKIILGLIKPDSGEITFDGKSYQKN-I 68 (208)
T ss_pred EEEEEEEEECC----eEeEeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCcCCCceEEEECCCcccch-H
Confidence 37899999853 4699999999988 999999 57665 6799999999999999999987543 4
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.++|+||++.+|+.+||.||+.++....+.+ ..++.++++.+|+.+..++++.+||||||||+++|+++
T Consensus 69 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al--- 141 (208)
T cd03268 69 EALRRIGALIEAPGFYPNLTARENLRLLARLLGIR----KKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALAL--- 141 (208)
T ss_pred HHHhhEEEecCCCccCccCcHHHHHHHHHHhcCCc----HHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHH---
Confidence 45678999999999999999999999876554432 34678899999999999999999999999999754432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 142 -----------------------------------~~~-----------------------------------p~llllD 151 (208)
T cd03268 142 -----------------------------------LGN-----------------------------------PDLLILD 151 (208)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEC
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|||+|||+.++..++++|+++. .+|+|+|++||+++++..+||++++|.+|+++..
T Consensus 152 EPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~ 207 (208)
T cd03268 152 EPTNGLDPDGIKELRELILSLR-----DQGITVLISSHLLSEIQKVADRIGIINKGKLIEE 207 (208)
T ss_pred CCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEec
Confidence 9999999999999999999873 2589999999999999999999999999997654
No 106
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-38 Score=332.63 Aligned_cols=215 Identities=23% Similarity=0.338 Sum_probs=180.7
Q ss_pred hhhhhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 48 YVSLFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
.++.+++|++.|+... ....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGs--GKSTL------l~~L~Gl~~p~~G~I~i~g~~~~ 91 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGS--GKSTL------VTHFNGLIKSKYGTIQVGDIYIG 91 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCeEEECCEEcc
Confidence 4566999999986422 234699999999988 999999 56665 57999999999999999998874
Q ss_pred Cc-----------------hHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-ccc
Q psy7365 121 TD-----------------MTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKR 180 (601)
Q Consensus 121 ~~-----------------~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~ 180 (601)
.. ....++.+|||||+| .+| ..||.||+.|+....+.+..+...++.++++.+||. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~ 170 (320)
T PRK13631 92 DKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLF-KDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYL 170 (320)
T ss_pred cccccccccccccccccchHHHHHhcEEEEEECchhccc-cchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHh
Confidence 31 235678899999998 355 469999999987666677777778899999999997 678
Q ss_pred CCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhc
Q psy7365 181 TSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAG 260 (601)
Q Consensus 181 ~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 260 (601)
++.+.+||||||||++|||||+ .+
T Consensus 171 ~~~~~~LSgGqkqRvaiAraL~--------------------------------------~~------------------ 194 (320)
T PRK13631 171 ERSPFGLSGGQKRRVAIAGILA--------------------------------------IQ------------------ 194 (320)
T ss_pred cCCcccCCHHHHHHHHHHHHHH--------------------------------------cC------------------
Confidence 9999999999999998654332 22
Q ss_pred chhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCC
Q psy7365 261 TSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAG 340 (601)
Q Consensus 261 ~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~G 340 (601)
|++|||||||+|||+.++..++++|.++. .+|.|||++||+++++..+|||+++|.+|
T Consensus 195 -----------------p~iLLLDEPtsgLD~~~~~~l~~~L~~l~-----~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 195 -----------------PEILIFDEPTAGLDPKGEHEMMQLILDAK-----ANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred -----------------CCEEEEECCccCCCHHHHHHHHHHHHHHH-----HCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 58999999999999999999999999873 35899999999999999999999999999
Q ss_pred ccccccCcc
Q psy7365 341 KLQCCGSSV 349 (601)
Q Consensus 341 kIv~~G~~~ 349 (601)
+++..|++.
T Consensus 253 ~i~~~g~~~ 261 (320)
T PRK13631 253 KILKTGTPY 261 (320)
T ss_pred EEEEeCCHH
Confidence 998877643
No 107
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=327.90 Aligned_cols=214 Identities=25% Similarity=0.343 Sum_probs=178.3
Q ss_pred hhhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 50 SLFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+.+++|++.|++.. ....+++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGa--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~ 74 (287)
T PRK13641 3 IKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGS--GKSTL------MQHFNALLKPSSGTITIAGYHITPE 74 (287)
T ss_pred EEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCcEEEECCEECccc
Confidence 34899999986422 124699999999988 999999 56665 679999999999999999998753
Q ss_pred ----chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhh
Q psy7365 122 ----DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 122 ----~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~ 195 (601)
.....++.+||+||+|. .++.+||.||+.|+....+..+++...++.++++.+||. ...++++.+||||||||+
T Consensus 75 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 75 TGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred cccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHH
Confidence 12345678999999983 333689999999877666666667777899999999997 688999999999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++|||| +.+
T Consensus 155 ~laral--------------------------------------~~~--------------------------------- 163 (287)
T PRK13641 155 AIAGVM--------------------------------------AYE--------------------------------- 163 (287)
T ss_pred HHHHHH--------------------------------------HcC---------------------------------
Confidence 865433 222
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|++|||||||+|||+.++..++++|+++. ..|.|||++||+++++..+||++++|.+|+++..+++.
T Consensus 164 --p~lLlLDEPt~gLD~~~~~~l~~~l~~l~-----~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 164 --PEILCLDEPAAGLDPEGRKEMMQLFKDYQ-----KAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred --CCEEEEECCCCCCCHHHHHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 58999999999999999999999999872 35899999999999999999999999999998777543
No 108
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-38 Score=319.65 Aligned_cols=208 Identities=23% Similarity=0.340 Sum_probs=174.2
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+++|++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++....
T Consensus 4 ~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~- 70 (239)
T cd03296 4 EVRNVSKRFGD----FVALDDVSLDIPSGELVALLGPSGS--GKTTL------LRLIAGLERPDSGTILFGGEDATDVP- 70 (239)
T ss_pred EEEeEEEEECC----EEeeeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEECCcCC-
Confidence 48899999864 4599999999988 999999 56665 67999999999999999999875321
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC----ChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV----PKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
..++.++|+||+|.+|+.+||.||+.|+....+. +..+...++.++++.+|+.+..++++.+||||||||+++|||
T Consensus 71 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~a 150 (239)
T cd03296 71 VQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARA 150 (239)
T ss_pred ccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHH
Confidence 1246799999999999999999999987654433 334445678899999999988999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 151 l--------------------------------------~~~-----------------------------------p~l 157 (239)
T cd03296 151 L--------------------------------------AVE-----------------------------------PKV 157 (239)
T ss_pred H--------------------------------------hcC-----------------------------------CCE
Confidence 3 222 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+.+++.++++|.++. +..|+|||++||+++++...||++++|.+|+++..+.+
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~----~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 221 (239)
T cd03296 158 LLLDEPFGALDAKVRKELRRWLRRLH----DELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTP 221 (239)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 99999999999999999999999873 22489999999999999999999999999998876643
No 109
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2e-38 Score=342.18 Aligned_cols=211 Identities=19% Similarity=0.305 Sum_probs=179.6
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+..++||++.|++ .++++|+||++.+ +||||| ||||| .|+|+|+++|++|+|+++|+++..
T Consensus 3 ~L~~~nls~~y~~----~~vL~~vs~~i~~Geiv~liGpNGa--GKSTL------Lk~LaGll~p~sG~I~l~G~~i~~~ 70 (402)
T PRK09536 3 MIDVSDLSVEFGD----TTVLDGVDLSVREGSLVGLVGPNGA--GKTTL------LRAINGTLTPTAGTVLVAGDDVEAL 70 (402)
T ss_pred eEEEeeEEEEECC----EEEEEeeEEEECCCCEEEEECCCCc--hHHHH------HHHHhcCCCCCCcEEEECCEEcCcC
Confidence 4568999999863 4699999999988 999999 56655 679999999999999999998865
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc--CC--ChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK--QV--PKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~--~~--~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
....+++++||+||++.+++.+||.||+.++...+ .+ .....+++++++++.+|+.+..++++.+||||||||++|
T Consensus 71 ~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~I 150 (402)
T PRK09536 71 SARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLL 150 (402)
T ss_pred CHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHH
Confidence 34566788999999999999999999999865322 11 133456678999999999999999999999999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
||| ++++
T Consensus 151 ArA--------------------------------------L~~~----------------------------------- 157 (402)
T PRK09536 151 ARA--------------------------------------LAQA----------------------------------- 157 (402)
T ss_pred HHH--------------------------------------HHcC-----------------------------------
Confidence 543 3333
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|++|||||||+|||+.++..++++|+++. .+|+|||++||+++++.++|||+++|++|+++..|++.
T Consensus 158 P~iLLLDEPtsgLD~~~~~~l~~lL~~l~-----~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ 224 (402)
T PRK09536 158 TPVLLLDEPTASLDINHQVRTLELVRRLV-----DDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPA 224 (402)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHH-----hcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 58999999999999999999999999983 25889999999999999999999999999999888654
No 110
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.9e-38 Score=311.58 Aligned_cols=197 Identities=25% Similarity=0.331 Sum_probs=164.8
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
++||++.|++. .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. ..
T Consensus 2 ~~~l~~~~~~~---~~~l~~v~~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~--~~ 68 (205)
T cd03226 2 IENISFSYKKG---TEILDDLSLDLYAGEIIALTGKNGA--GKTTL------AKILAGLIKESSGSILLNGKPIKA--KE 68 (205)
T ss_pred cccEEEEeCCc---CceeeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEEhhh--HH
Confidence 67899998541 4599999999988 999999 56665 679999999999999999998743 34
Q ss_pred hcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 126 IRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 126 ~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
.++.+||+||++. .++.+|+.||+.++....+. ...++.++++.+|+.+..++++.+||||||||+++||||
T Consensus 69 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral--- 141 (205)
T cd03226 69 RRKSIGYVMQDVDYQLFTDSVREELLLGLKELDA----GNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAAL--- 141 (205)
T ss_pred hhcceEEEecChhhhhhhccHHHHHhhhhhhcCc----cHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHH---
Confidence 5668999999985 34578999999886554331 125678999999999999999999999999999865432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 142 -----------------------------------~~~-----------------------------------p~llllD 151 (205)
T cd03226 142 -----------------------------------LSG-----------------------------------KDLLIFD 151 (205)
T ss_pred -----------------------------------HhC-----------------------------------CCEEEEe
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQ 343 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv 343 (601)
|||+|||+.++..+++.|+++. .+|.|+|++||+++++..+||++++|.+|+++
T Consensus 152 EPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 152 EPTSGLDYKNMERVGELIRELA-----AQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCCccCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999873 35899999999999999999999999999864
No 111
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.1e-38 Score=313.67 Aligned_cols=207 Identities=23% Similarity=0.340 Sum_probs=170.5
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-h
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-M 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~ 123 (601)
.+++|++.|++.....++++++||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 3 ~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~~ 74 (221)
T TIGR02211 3 KCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGS--GKSTL------LHLLGGLDNPTSGEVLFNGQSLSKLSS 74 (221)
T ss_pred EEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEEhhhcCH
Confidence 4789999986433235699999999988 999999 57665 6799999999999999999987532 2
Q ss_pred H---Hhc-ccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 124 T---TIR-RSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 124 ~---~~~-~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
. ..+ +.++|+||++.+|+.+|++||+.+.....+.+..+...++.++++.+|+.+..++++.+||||||||+++||
T Consensus 75 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 75 NERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred hHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHH
Confidence 1 123 679999999999999999999998665444554455567889999999999899999999999999998644
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
+| +.+ |+
T Consensus 155 al--------------------------------------~~~-----------------------------------p~ 161 (221)
T TIGR02211 155 AL--------------------------------------VNQ-----------------------------------PS 161 (221)
T ss_pred HH--------------------------------------hCC-----------------------------------CC
Confidence 32 222 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQ 343 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv 343 (601)
++||||||+|||+.++..+++.|+++. +..|+|+|++||+++++.. ||++++|.+|+++
T Consensus 162 illlDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 162 LVLADEPTGNLDNNNAKIIFDLMLELN----RELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999873 2248999999999999865 7999999999864
No 112
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-38 Score=317.46 Aligned_cols=209 Identities=28% Similarity=0.399 Sum_probs=173.1
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc---
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD--- 122 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~--- 122 (601)
+++|++.|++ +.++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~l~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 71 (241)
T cd03256 3 VENLSKTYPN---GKKALKDVSLSINPGEFVALIGPSGA--GKSTL------LRCLNGLVEPTSGSVLIDGTDINKLKGK 71 (241)
T ss_pred EeeEEEecCC---ccEEEecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCcCCCCceEEECCEeccccCHh
Confidence 6899999864 14599999999988 999999 56665 5799999999999999999987532
Q ss_pred -hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhh--------cCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHh
Q psy7365 123 -MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL--------KQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQR 193 (601)
Q Consensus 123 -~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~--------~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~q 193 (601)
....++.++|+||++.+|+.+||.||+.+.... .+.......+++.++++.+|+.+..++++.+|||||||
T Consensus 72 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~q 151 (241)
T cd03256 72 ALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQ 151 (241)
T ss_pred HHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHH
Confidence 234567899999999999999999999875321 12222344567889999999998899999999999999
Q ss_pred hhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhh
Q psy7365 194 KLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAM 273 (601)
Q Consensus 194 r~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 273 (601)
|+++||++ +++
T Consensus 152 rv~la~al--------------------------------------~~~------------------------------- 162 (241)
T cd03256 152 RVAIARAL--------------------------------------MQQ------------------------------- 162 (241)
T ss_pred HHHHHHHH--------------------------------------hcC-------------------------------
Confidence 99864432 233
Q ss_pred ccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 274 SFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 274 ~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|+++. +..|+|||++||+++++..+||++++|.+|+++..+++
T Consensus 163 ----p~llllDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 229 (241)
T cd03256 163 ----PKLILADEPVASLDPASSRQVMDLLKRIN----REEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPP 229 (241)
T ss_pred ----CCEEEEeCccccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCH
Confidence 58999999999999999999999999873 22489999999999999999999999999998876643
No 113
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-38 Score=317.67 Aligned_cols=208 Identities=28% Similarity=0.452 Sum_probs=176.2
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
+++|++.|++. .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. ...
T Consensus 3 ~~~l~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 71 (242)
T cd03295 3 FENVTKRYGGG---KKAVNNLNLEIAKGEFLVLIGPSGS--GKTTT------MKMINRLIEPTSGEIFIDGEDIREQDPV 71 (242)
T ss_pred EEEEEEEeCCc---ceEeeeeEEEECCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCeEcCcCChH
Confidence 68899998641 4599999999988 999999 57665 679999999999999999998754 334
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc--ccCCccccCChHHHhhhhchhhhc
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH--KRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~--~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
..++.++|+||++.+|+.+|+.||+.++....+.+......++.++++.+|+.+ ..++++.+||||||||+++|||+
T Consensus 72 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral- 150 (242)
T cd03295 72 ELRRKIGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARAL- 150 (242)
T ss_pred HhhcceEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHH-
Confidence 456789999999999999999999998766656655556677889999999996 78999999999999999754432
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
+.+ |+++|
T Consensus 151 -------------------------------------~~~-----------------------------------p~lll 158 (242)
T cd03295 151 -------------------------------------AAD-----------------------------------PPLLL 158 (242)
T ss_pred -------------------------------------hcC-----------------------------------CCEEE
Confidence 233 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|||||+|||+.++..+++.|+++. +..|+|||++||+++++..+||++++|.+|+++..+.
T Consensus 159 lDEPt~~LD~~~~~~l~~~L~~~~----~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 219 (242)
T cd03295 159 MDEPFGALDPITRDQLQEEFKRLQ----QELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGT 219 (242)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHH----HHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999873 2248999999999999999999999999999876654
No 114
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-38 Score=326.39 Aligned_cols=213 Identities=25% Similarity=0.382 Sum_probs=178.6
Q ss_pred hhccccccccc-CCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC--
Q psy7365 51 LFESLSENRDK-LGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-- 121 (601)
Q Consensus 51 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-- 121 (601)
.+++|++.|+. .....++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 4 ~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~L~Gl~~p~~G~i~~~g~~i~~~~ 75 (286)
T PRK13646 4 RFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGS--GKSTL------IQNINALLKPTTGTVTVDDITITHKT 75 (286)
T ss_pred EEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCcEEEECCEECcccc
Confidence 48899999863 22235699999999988 999999 56655 579999999999999999998853
Q ss_pred ---chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhhh
Q psy7365 122 ---DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 122 ---~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~~ 196 (601)
....+++.+|||||+|. .++..||.||+.|+....+.+.++...++.++++.+||. +..++.+.+||||||||++
T Consensus 76 ~~~~~~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 76 KDKYIRPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred ccchHHHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHH
Confidence 12356778999999973 333469999999987776777777778899999999997 6789999999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+|||| +.+
T Consensus 156 laraL--------------------------------------~~~---------------------------------- 163 (286)
T PRK13646 156 IVSIL--------------------------------------AMN---------------------------------- 163 (286)
T ss_pred HHHHH--------------------------------------HhC----------------------------------
Confidence 65432 222
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|++++ +..|.|||++||+++++..+|||+++|.+|+++..+++
T Consensus 164 -p~illlDEPt~~LD~~~~~~l~~~l~~l~----~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 164 -PDIIVLDEPTAGLDPQSKRQVMRLLKSLQ----TDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred -CCEEEEECCcccCCHHHHHHHHHHHHHHH----HhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 58999999999999999999999999984 23589999999999999999999999999999887754
No 115
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.5e-38 Score=310.82 Aligned_cols=201 Identities=24% Similarity=0.363 Sum_probs=170.9
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC---c
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT---D 122 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~---~ 122 (601)
+++|++.|++ .++++++||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. .
T Consensus 3 ~~~l~~~~~~----~~~l~~~s~~i~~G~~~~l~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 70 (213)
T cd03262 3 IKNLHKSFGD----FHVLKGIDLTVKKGEVVVIIGPSGS--GKSTL------LRCINLLEEPDSGTIIIDGLKLTDDKKN 70 (213)
T ss_pred EEEEEEEECC----eEeecCceEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEECCccchh
Confidence 7899999864 3599999999988 999999 56665 679999999999999999998743 2
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHh-hcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ-LKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
....++.++|+||++.+|+.+|+.||+.++.. ..+.+.++..+++.++++.+|+.+..++++.+||||||||+++|+++
T Consensus 71 ~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 71 INELRQKVGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred HHHHHhcceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 33456789999999999999999999988643 33555555667788999999999889999999999999999754432
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+++ |+++
T Consensus 151 --------------------------------------~~~-----------------------------------p~ll 157 (213)
T cd03262 151 --------------------------------------AMN-----------------------------------PKVM 157 (213)
T ss_pred --------------------------------------hcC-----------------------------------CCEE
Confidence 233 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
||||||+|||+.++..+++.|+++. ..|+|+|++||+++++..+||++++|.+|++
T Consensus 158 llDEP~~~LD~~~~~~l~~~l~~~~-----~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 158 LFDEPTSALDPELVGEVLDVMKDLA-----EEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999873 3589999999999999999999999999874
No 116
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-38 Score=322.66 Aligned_cols=209 Identities=27% Similarity=0.396 Sum_probs=176.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-h
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-M 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~ 123 (601)
.++++++.|+.. .+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 26 ~~~~~~~~~~~~----~il~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~L~Gl~~p~~G~i~i~g~~~~~~~~ 93 (269)
T cd03294 26 SKEEILKKTGQT----VGVNDVSLDVREGEIFVIMGLSGS--GKSTL------LRCINRLIEPTSGKVLIDGQDIAAMSR 93 (269)
T ss_pred hhhhhhhhcCCc----eEeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCeEEEECCEEccccCh
Confidence 467899998754 489999999988 999999 56665 5799999999999999999987532 1
Q ss_pred HH----hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 124 TT----IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 124 ~~----~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
.. .++.+||+||++.+|+.+||.||+.++....+.+......++.++++.+||.+..++++.+||||||||+++||
T Consensus 94 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAr 173 (269)
T cd03294 94 KELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLAR 173 (269)
T ss_pred hhhhhhhcCcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHH
Confidence 11 24579999999999999999999998766555555555677889999999999999999999999999998654
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
|| +++ |+
T Consensus 174 al--------------------------------------~~~-----------------------------------p~ 180 (269)
T cd03294 174 AL--------------------------------------AVD-----------------------------------PD 180 (269)
T ss_pred HH--------------------------------------hcC-----------------------------------CC
Confidence 33 233 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++||||||+|||+.+++.++++|.++. +..|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 181 illLDEPt~~LD~~~~~~l~~~l~~~~----~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~ 245 (269)
T cd03294 181 ILLMDEAFSALDPLIRREMQDELLRLQ----AELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTP 245 (269)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999873 23489999999999999999999999999998876643
No 117
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.3e-38 Score=316.52 Aligned_cols=208 Identities=23% Similarity=0.384 Sum_probs=175.5
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC---
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT--- 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~--- 121 (601)
.++++++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++..
T Consensus 3 ~~~~l~~~~~~----~~il~~~s~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 70 (240)
T PRK09493 3 EFKNVSKHFGP----TQVLHNIDLNIDQGEVVVIIGPSGS--GKSTL------LRCINKLEEITSGDLIVDGLKVNDPKV 70 (240)
T ss_pred EEEeEEEEECC----eEEeeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEECCcCCh
Confidence 47899999863 4599999999988 999999 56665 579999999999999999998753
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHh-hcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ-LKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
.....++.+||+||++.+|+.+||.||+.|+.. ..+.+..+...++.++++.+|+++..++++.+||||||||+++||+
T Consensus 71 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~a 150 (240)
T PRK09493 71 DERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARA 150 (240)
T ss_pred hHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHH
Confidence 223456789999999999999999999988643 2345555566778899999999988899999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 151 l--------------------------------------~~~-----------------------------------p~l 157 (240)
T PRK09493 151 L--------------------------------------AVK-----------------------------------PKL 157 (240)
T ss_pred H--------------------------------------hcC-----------------------------------CCE
Confidence 2 222 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+.++..++++|+++. .+|+|+|++||+++++..+||++++|.+|+++..+..
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 220 (240)
T PRK09493 158 MLFDEPTSALDPELRHEVLKVMQDLA-----EEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDP 220 (240)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCH
Confidence 99999999999999999999999873 3589999999999999999999999999999876643
No 118
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-38 Score=324.76 Aligned_cols=215 Identities=25% Similarity=0.369 Sum_probs=181.2
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
.++..++++++.|+. +..+++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.
T Consensus 3 ~~~l~~~~l~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGa--GKSTL------l~~i~Gl~~p~~G~i~i~g~~~~ 71 (283)
T PRK13636 3 DYILKVEELNYNYSD---GTHALKGININIKKGEVTAILGGNGA--GKSTL------FQNLNGILKPSSGRILFDGKPID 71 (283)
T ss_pred CceEEEEeEEEEeCC---CCeeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCccEEEECCEECC
Confidence 345679999999852 24599999999988 999999 56655 57999999999999999999884
Q ss_pred C---chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhh
Q psy7365 121 T---DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 121 ~---~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
. ....+++.+||+||++. .++..||.||+.|+....+.+..+.+.++.++++.+||.+..++++.+||||||||++
T Consensus 72 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 72 YSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVA 151 (283)
T ss_pred CCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHH
Confidence 2 23456778999999984 4456899999998776667777776778999999999999999999999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+|||| +.+
T Consensus 152 laraL--------------------------------------~~~---------------------------------- 159 (283)
T PRK13636 152 IAGVL--------------------------------------VME---------------------------------- 159 (283)
T ss_pred HHHHH--------------------------------------HcC----------------------------------
Confidence 54432 233
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|++|||||||+|||+.++..++++|+++. +..|+|||++||+++++..+|||+++|.+|+++..|+..
T Consensus 160 -p~lLilDEPt~gLD~~~~~~l~~~l~~l~----~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~ 227 (283)
T PRK13636 160 -PKVLVLDEPTAGLDPMGVSEIMKLLVEMQ----KELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPK 227 (283)
T ss_pred -CCEEEEeCCccCCCHHHHHHHHHHHHHHH----HhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 58999999999999999999999999873 224899999999999999999999999999998877543
No 119
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.2e-38 Score=321.88 Aligned_cols=212 Identities=24% Similarity=0.347 Sum_probs=176.4
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
.++.+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 6 ~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~~ 73 (269)
T PRK11831 6 NLVDMRGVSFTRGN----RCIFDNISLTVPRGKITAIMGPSGI--GKTTL------LRLIGGQIAPDHGEILFDGENIPA 73 (269)
T ss_pred ceEEEeCeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEEccc
Confidence 34669999999853 4599999999988 999999 56665 579999999999999999998753
Q ss_pred c----hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhh
Q psy7365 122 D----MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 122 ~----~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
. ....++.+||+||++.+|+.+||.||+.++.... +.+....+.++.++++.+|+.+..++++.+||||||||++
T Consensus 74 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~ 153 (269)
T PRK11831 74 MSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAA 153 (269)
T ss_pred cChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHH
Confidence 1 1234667999999999999999999998865433 3444445567889999999999999999999999999997
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+||++ +.+
T Consensus 154 laral--------------------------------------~~~---------------------------------- 161 (269)
T PRK11831 154 LARAI--------------------------------------ALE---------------------------------- 161 (269)
T ss_pred HHHHH--------------------------------------hcC----------------------------------
Confidence 54432 222
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. +..|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 162 -p~lllLDEPt~~LD~~~~~~l~~~l~~~~----~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 228 (269)
T PRK11831 162 -PDLIMFDEPFVGQDPITMGVLVKLISELN----SALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSA 228 (269)
T ss_pred -CCEEEEcCCCccCCHHHHHHHHHHHHHHH----HhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999873 23489999999999999999999999999998876643
No 120
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.5e-38 Score=313.65 Aligned_cols=206 Identities=25% Similarity=0.350 Sum_probs=171.4
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCC-----CCCeeEEEEccccC
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGML-----PVSSGTAKIYDHDI 119 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~-----~~~~G~v~~~g~~~ 119 (601)
.++||++.|+. .++++|+||++.+ +||||| ||||| .++|+|++ +|++|+|.++|.++
T Consensus 2 ~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~~~~~~G~i~~~g~~~ 69 (227)
T cd03260 2 ELRDLNVYYGD----KHALKDISLDIPKGEITALIGPSGC--GKSTL------LRLLNRLNDLIPGAPDEGEVLLDGKDI 69 (227)
T ss_pred EEEEEEEEcCC----ceeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhhcccccCCCCCeEEEECCEEh
Confidence 37899999864 3599999999988 999999 56665 57999999 99999999999987
Q ss_pred CCc---hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCCh-HHHHHHHHHHHHHcCCCcccCCc--cccCChHHHh
Q psy7365 120 RTD---MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPK-DLAQLEISNMIGDLGIPHKRTSL--ANTLSGGMQR 193 (601)
Q Consensus 120 ~~~---~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~gl~~~~~~~--~~~LSgG~~q 193 (601)
... ....++.+||+||++.+| .+||.||+.++....+... .+.++++.++++.+|+.+..++. +.+|||||||
T Consensus 70 ~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~q 148 (227)
T cd03260 70 YDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQ 148 (227)
T ss_pred hhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHH
Confidence 532 334567899999999888 8999999998766555433 23567788999999999876666 5999999999
Q ss_pred hhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhh
Q psy7365 194 KLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAM 273 (601)
Q Consensus 194 r~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 273 (601)
|+++||++ +.+
T Consensus 149 rv~la~al--------------------------------------~~~------------------------------- 159 (227)
T cd03260 149 RLCLARAL--------------------------------------ANE------------------------------- 159 (227)
T ss_pred HHHHHHHH--------------------------------------hcC-------------------------------
Confidence 99854432 232
Q ss_pred ccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 274 SFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 274 ~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. .+ +|||++||+++++..+||++++|.+|+++..+++
T Consensus 160 ----p~llllDEPt~~LD~~~~~~l~~~l~~~~-----~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 224 (227)
T cd03260 160 ----PEVLLLDEPTSALDPISTAKIEELIAELK-----KE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPT 224 (227)
T ss_pred ----CCEEEEeCCCccCCHHHHHHHHHHHHHHh-----hC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 58999999999999999999999999873 34 8999999999999999999999999998876643
No 121
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7e-38 Score=315.57 Aligned_cols=208 Identities=26% Similarity=0.446 Sum_probs=174.6
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|++ ..+++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 3 ~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~p~~G~i~~~g~~i~~~~~ 70 (236)
T TIGR03864 3 EVAGLSFAYGA----RRALDDVSFTVRPGEFVALLGPNGA--GKSTL------FSLLTRLYVAQEGQISVAGHDLRRAPR 70 (236)
T ss_pred EEEeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCcCCCceEEEECCEEcccCCh
Confidence 47899999853 4599999999988 999999 56665 679999999999999999998754322
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.++|+||++.+++.+|+.||+.++....+.+..+...++.++++.+|+.+..++.+.+||||||||+++||+|
T Consensus 71 ~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral--- 147 (236)
T TIGR03864 71 AALARLGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARAL--- 147 (236)
T ss_pred hhhhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHH---
Confidence 33457999999999988999999999876665655555667788999999999889999999999999999865432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 148 -----------------------------------~~~-----------------------------------p~llllD 157 (236)
T TIGR03864 148 -----------------------------------LHR-----------------------------------PALLLLD 157 (236)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEc
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||+|||+.+++.+++.|+++. +..|.|+|++||+++++.. ||++++|.+|+++..++.
T Consensus 158 EP~~~LD~~~~~~l~~~l~~~~----~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~ 216 (236)
T TIGR03864 158 EPTVGLDPASRAAIVAHVRALC----RDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAA 216 (236)
T ss_pred CCccCCCHHHHHHHHHHHHHHH----HhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCH
Confidence 9999999999999999999873 2258999999999999975 999999999998776543
No 122
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.8e-38 Score=317.61 Aligned_cols=210 Identities=25% Similarity=0.365 Sum_probs=172.9
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.+++|++.|+. +.++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~~l~~~~~~---~~~il~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~ 71 (243)
T TIGR02315 3 EVENLSKVYPN---GKQALKNINLNINPGEFVAIIGPSGA--GKSTL------LRCINRLVEPSSGSILLEGTDITKLRG 71 (243)
T ss_pred EEEeeeeecCC---CcceeecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCcCCCccEEEECCEEhhhCCH
Confidence 47899999851 24599999999988 999999 56665 6799999999999999999987531
Q ss_pred --hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhh--------cCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHH
Q psy7365 123 --MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL--------KQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQ 192 (601)
Q Consensus 123 --~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~--------~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~ 192 (601)
....++.+||+||++.+|+.+||.||+.++... .+....+.+.++.++++.+|+.+..++++.+||||||
T Consensus 72 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~ 151 (243)
T TIGR02315 72 KKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQ 151 (243)
T ss_pred HHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHH
Confidence 123567899999999999999999999875321 1222234456788999999999889999999999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++||+|+ .+
T Consensus 152 qrv~la~al~--------------------------------------~~------------------------------ 163 (243)
T TIGR02315 152 QRVAIARALA--------------------------------------QQ------------------------------ 163 (243)
T ss_pred HHHHHHHHHh--------------------------------------cC------------------------------
Confidence 9998654332 22
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. +..|+|+|++||+++++.++||++++|.+|+++..+++
T Consensus 164 -----p~llllDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 230 (243)
T TIGR02315 164 -----PDLILADEPIASLDPKTSKQVMDYLKRIN----KEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAP 230 (243)
T ss_pred -----CCEEEEeCCcccCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCH
Confidence 58999999999999999999999999873 22489999999999999999999999999998876643
No 123
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-38 Score=323.67 Aligned_cols=212 Identities=25% Similarity=0.368 Sum_probs=179.5
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..+++|++.|+. .+.++++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|+++...
T Consensus 5 ~l~~~~l~~~~~~--~~~~~l~~vsl~i~~Ge~~~i~G~nGa--GKSTL------l~~i~G~~~p~~G~i~~~g~~i~~~ 74 (279)
T PRK13635 5 IIRVEHISFRYPD--AATYALKDVSFSVYEGEWVAIVGHNGS--GKSTL------AKLLNGLLLPEAGTITVGGMVLSEE 74 (279)
T ss_pred eEEEEEEEEEeCC--CCccceeeeEEEEcCCCEEEEECCCCC--cHHHH------HHHHhcCCCCCCcEEEECCEECCcC
Confidence 4569999999853 235699999999988 999999 56655 5799999999999999999998642
Q ss_pred -hHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 -MTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 -~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
...+++.+||+||++. +|+..||.||+.|+....+.+..+.++++.++++.+||.+..++++.+||||||||+++||+
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~lara 154 (279)
T PRK13635 75 TVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGV 154 (279)
T ss_pred cHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHH
Confidence 3445678999999984 77789999999988776666766777789999999999999999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
+ +.+ |++
T Consensus 155 l--------------------------------------~~~-----------------------------------p~l 161 (279)
T PRK13635 155 L--------------------------------------ALQ-----------------------------------PDI 161 (279)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 2 232 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+.++..++++|+++. +..|.|||++||+++++. .||+++++.+|+++..++.
T Consensus 162 llLDEPt~gLD~~~~~~l~~~l~~l~----~~~~~tilivsH~~~~~~-~~d~i~~l~~G~i~~~g~~ 224 (279)
T PRK13635 162 IILDEATSMLDPRGRREVLETVRQLK----EQKGITVLSITHDLDEAA-QADRVIVMNKGEILEEGTP 224 (279)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHH----HcCCCEEEEEecCHHHHH-cCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999883 234899999999999987 5999999999998877653
No 124
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-38 Score=329.53 Aligned_cols=217 Identities=15% Similarity=0.205 Sum_probs=180.9
Q ss_pred hhhhhcccccccccCCC------ccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEc
Q psy7365 48 YVSLFESLSENRDKLGI------DSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIY 115 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~ 115 (601)
.+..++||++.|+...+ ...+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGs--GKSTL------l~~l~gl~~p~~G~i~~~ 75 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGC--GKSTL------ARLLTMIETPTGGELYYQ 75 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCC--cHHHH------HHHHHcCCCCCCcEEEEC
Confidence 35569999999964222 35799999999988 999999 56655 469999999999999999
Q ss_pred cccCCCc----hHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCC-cccCCccccC
Q psy7365 116 DHDIRTD----MTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIP-HKRTSLANTL 187 (601)
Q Consensus 116 g~~~~~~----~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~L 187 (601)
|.++... ...+++.+|||||+| .+++.+|+.+++.+..... +..+.+.+.++.++++.+||. ...++++++|
T Consensus 76 g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~L 155 (327)
T PRK11308 76 GQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMF 155 (327)
T ss_pred CEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccC
Confidence 9998542 234567899999998 5889999999998765543 456666778899999999997 4679999999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
|||||||++||+| ++.+
T Consensus 156 SgGq~QRv~iArA--------------------------------------L~~~------------------------- 172 (327)
T PRK11308 156 SGGQRQRIAIARA--------------------------------------LMLD------------------------- 172 (327)
T ss_pred CHHHHHHHHHHHH--------------------------------------HHcC-------------------------
Confidence 9999999975443 2233
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|++||+||||++||+..+..++++|+++. +..|.|+|++|||++++..+||++++|.+|+++..|+
T Consensus 173 ----------P~lLilDEPts~LD~~~~~~i~~lL~~l~----~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~ 238 (327)
T PRK11308 173 ----------PDVVVADEPVSALDVSVQAQVLNLMMDLQ----QELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGT 238 (327)
T ss_pred ----------CCEEEEECCCccCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 58999999999999999999999999984 2358999999999999999999999999999998876
Q ss_pred cc
Q psy7365 348 SV 349 (601)
Q Consensus 348 ~~ 349 (601)
..
T Consensus 239 ~~ 240 (327)
T PRK11308 239 KE 240 (327)
T ss_pred HH
Confidence 43
No 125
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.3e-37 Score=311.71 Aligned_cols=210 Identities=22% Similarity=0.287 Sum_probs=172.8
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..+++|++.|+.......+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~Gl~~p~~G~i~~~g~~~~~~ 77 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGS--GKSTL------LAILAGLDDGSSGEVSLVGQPLHQM 77 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCC--CHHHH------HHHHHcCCCCCCeeEEECCEEcccC
Confidence 456999999986422223599999999988 999999 56665 6799999999999999999987542
Q ss_pred -hH---Hh-cccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 123 -MT---TI-RRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 123 -~~---~~-~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
.. .. ++.+||+||++.+|+.+|+.||+.+.....+.+..+.++++.++++.+|+.+..++++.+||||||||+++
T Consensus 78 ~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~l 157 (228)
T PRK10584 78 DEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVAL 157 (228)
T ss_pred CHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHH
Confidence 11 12 35799999999999999999999886554455555566788999999999988999999999999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
||+|+ . +
T Consensus 158 a~al~--------------------------------------~-----------------------------------~ 164 (228)
T PRK10584 158 ARAFN--------------------------------------G-----------------------------------R 164 (228)
T ss_pred HHHHh--------------------------------------c-----------------------------------C
Confidence 54332 2 2
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQC 344 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~ 344 (601)
|+++||||||+|||+.++..+++.|+++. +..|.|||++||++++.. .||++++|.+|+++.
T Consensus 165 p~llllDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tii~~sH~~~~~~-~~d~i~~l~~g~i~~ 226 (228)
T PRK10584 165 PDVLFADEPTGNLDRQTGDKIADLLFSLN----REHGTTLILVTHDLQLAA-RCDRRLRLVNGQLQE 226 (228)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEe
Confidence 58999999999999999999999999873 224889999999999885 499999999998753
No 126
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.5e-37 Score=315.39 Aligned_cols=209 Identities=26% Similarity=0.358 Sum_probs=175.2
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~ 70 (250)
T PRK11264 3 AIEVKNLVKKFHG----QTVLHGIDLEVKPGEVVAIIGPSGS--GKTTL------LRCINLLEQPEAGTIRVGDITIDTA 70 (250)
T ss_pred cEEEeceEEEECC----eeeeccceEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCeEEEECCEEcccc
Confidence 3558999999863 3599999999988 999999 56665 5799999999999999999987421
Q ss_pred ---------hHHhcccEEEEccCCCCCCCCCHHHHHHHhHh-hcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHH
Q psy7365 123 ---------MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ-LKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQ 192 (601)
Q Consensus 123 ---------~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~ 192 (601)
....++.+||+||++.+|+.+|+.||+.++.. ..+.+..+...++.++++.+|+....++++.+||||||
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~ 150 (250)
T PRK11264 71 RSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQ 150 (250)
T ss_pred ccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHH
Confidence 23456789999999999999999999988543 23444455566788999999999888999999999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++||+| +.+
T Consensus 151 qrv~la~al--------------------------------------~~~------------------------------ 162 (250)
T PRK11264 151 QRVAIARAL--------------------------------------AMR------------------------------ 162 (250)
T ss_pred HHHHHHHHH--------------------------------------hcC------------------------------
Confidence 999854432 233
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|++|||||||+|||+.++..+++.|.++. .+|.|||++||+++++..+||++++|.+|+++..++
T Consensus 163 -----p~lllLDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 163 -----PEVILFDEPTSALDPELVGEVLNTIRQLA-----QEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred -----CCEEEEeCCCccCCHHHHHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 58999999999999999999999999873 358999999999999999999999999999877654
No 127
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.8e-38 Score=310.97 Aligned_cols=205 Identities=27% Similarity=0.399 Sum_probs=170.9
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-h
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-M 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~ 123 (601)
.+++|++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 2 ~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~ 69 (222)
T cd03224 2 EVENLNAGYGK----SQILFGVSLTVPEGEIVALLGRNGA--GKTTL------LKTIMGLLPPRSGSIRFDGRDITGLPP 69 (222)
T ss_pred EEeeEEeecCC----eeEeeeeeEEEcCCeEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEEcCCCCH
Confidence 37899998853 3599999999988 999999 56655 5799999999999999999987542 2
Q ss_pred HH-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHc-CCCcccCCccccCChHHHhhhhchhhh
Q psy7365 124 TT-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDL-GIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 124 ~~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
.. .++.+||+||++.+|+.+|+.||+.++....+ ..+...++.++++.+ ++.+..++++.+||||||||+++||+|
T Consensus 70 ~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral 147 (222)
T cd03224 70 HERARAGIGYVPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred HHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHH
Confidence 22 35679999999999999999999998765543 233455677888988 588888999999999999999865432
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+ .+ |+++
T Consensus 148 ~--------------------------------------~~-----------------------------------p~ll 154 (222)
T cd03224 148 M--------------------------------------SR-----------------------------------PKLL 154 (222)
T ss_pred h--------------------------------------cC-----------------------------------CCEE
Confidence 2 22 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
||||||+|||+.++..++++|+++. ..|+|+|++||+++++..+||++++|.+|++...+.
T Consensus 155 llDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 215 (222)
T cd03224 155 LLDEPSEGLAPKIVEEIFEAIRELR-----DEGVTILLVEQNARFALEIADRAYVLERGRVVLEGT 215 (222)
T ss_pred EECCCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCC
Confidence 9999999999999999999999873 258999999999999999999999999999876553
No 128
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.4e-37 Score=310.83 Aligned_cols=210 Identities=24% Similarity=0.305 Sum_probs=169.1
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch-
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM- 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~- 123 (601)
.+++|++.|++.....++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++....
T Consensus 3 ~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 74 (228)
T cd03257 3 EVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGS--GKSTL------ARAILGLLKPTSGSIIFDGKDLLKLSR 74 (228)
T ss_pred EEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEEccccch
Confidence 4789999986432123699999999988 999999 56665 67999999999999999999885422
Q ss_pred ---HHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcCCCh-HHHHHH-HHHHHHHcCCC-cccCCccccCChHHHhhh
Q psy7365 124 ---TTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQVPK-DLAQLE-ISNMIGDLGIP-HKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 124 ---~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~~~~-~~~~~~-~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~ 195 (601)
...++.+||+||++ .+++.+||+||+.+.....+... .....+ +.++++.+|+. ...++.+.+||||||||+
T Consensus 75 ~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 75 RLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred hhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHH
Confidence 34567899999998 46778999999988765544322 222233 35889999995 678999999999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++||+|+ .+
T Consensus 155 ~laral~--------------------------------------~~--------------------------------- 163 (228)
T cd03257 155 AIARALA--------------------------------------LN--------------------------------- 163 (228)
T ss_pred HHHHHHh--------------------------------------cC---------------------------------
Confidence 8654332 22
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|+++||||||+|||+.+++.+++.|+++. +..|+|||++||+++++..+||++++|.+|+++..
T Consensus 164 --p~lllLDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~ 227 (228)
T cd03257 164 --PKLLIADEPTSALDVSVQAQILDLLKKLQ----EELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEE 227 (228)
T ss_pred --CCEEEecCCCCCCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEec
Confidence 58999999999999999999999999873 22389999999999999999999999999997643
No 129
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=317.69 Aligned_cols=203 Identities=23% Similarity=0.383 Sum_probs=172.3
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~-- 68 (255)
T PRK11248 3 QISHLYADYGG----KPALEDINLTLESGELLVVLGPSGC--GKTTL------LNLIAGFVPYQHGSITLDGKPVEGP-- 68 (255)
T ss_pred EEEEEEEEeCC----eeeEeeeeEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEECCCC--
Confidence 47899999864 4599999999988 999999 56665 6799999999999999999987532
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
+..+||+||++.+|+.+||.||+.++....+.+..+...++.++++.+|+.+..++++.+||||||||+++||+|
T Consensus 69 --~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral--- 143 (255)
T PRK11248 69 --GAERGVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARAL--- 143 (255)
T ss_pred --CCcEEEEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHH---
Confidence 345899999999999999999999876655666555667889999999999888999999999999999754432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 144 -----------------------------------~~~-----------------------------------p~lllLD 153 (255)
T PRK11248 144 -----------------------------------AAN-----------------------------------PQLLLLD 153 (255)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEe
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec--CCcccccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA--AGKLQCCG 346 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~--~GkIv~~G 346 (601)
|||+|||+.++..++++|++++ +..|+|||++||+++++..+||++++|. +|+++...
T Consensus 154 EPt~~LD~~~~~~l~~~L~~~~----~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~ 213 (255)
T PRK11248 154 EPFGALDAFTREQMQTLLLKLW----QETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERL 213 (255)
T ss_pred CCCccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEe
Confidence 9999999999999999999873 2348999999999999999999999998 58876544
No 130
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.4e-36 Score=317.50 Aligned_cols=278 Identities=25% Similarity=0.403 Sum_probs=207.2
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc--ccccccccCCCCcccC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA--PQKSYIGYCPQFDALN 384 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~--~~~~~ig~v~Q~~~l~ 384 (601)
++.++ +++++...-++.+++++... .|++++++ +..|..++.+.+.... ..++.+||+||++.++
T Consensus 5 ~~~~l---~~vs~~i~~Ge~~~l~G~NG---aGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 5 DFKAV---DGVNFKVREGEVFGFLGPNG---AGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred CeeEE---eeeeEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCC
Confidence 34554 89999999999999997522 45555432 3344444444443221 2356799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|++||+.++..+++.+..+..++++++++.++|.+..++++.+|||||||||+||+||+++|++|||||||+||||.
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~ 158 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPR 158 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHH
Confidence 99999999999887777665556677899999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEecCCC-chhHHHHH
Q psy7365 465 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCAEGR-SADAQTYL 543 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~~~~-~~~~~~~l 543 (601)
+++.++++|++++++|+|||++||++++++.+|||+++|++|++++.|+++++.+.+... .+.+...... .......+
T Consensus 159 ~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ 237 (302)
T TIGR01188 159 TRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRRLGKD-TLESRPRDIQSLKVEVSML 237 (302)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHhcCCc-eEEEEecCchhhhhhhhHH
Confidence 999999999999878999999999999999999999999999999999999998876543 3344432211 01000111
Q ss_pred ----hhcCCCceeEEeeCcEEEEEEcCCcccHHHHHHHHHHccccCCCeeEEEecCCCCCCC
Q psy7365 544 ----SLNLPVADLVETHATQLQYRISGAVSDLGALFRTLESAKTEAGLIVDYSLSQTSLEDS 601 (601)
Q Consensus 544 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~i~~~~v~~~sLEdv 601 (601)
....++.......++.+.+.++......+.++..+.+.+ .. +.++++.++||||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~-i~~~~~~~~~Le~~ 296 (302)
T TIGR01188 238 IAELGETGLGLLAVTVDSDRIKILVPDGDETVPEIVEAAIRNG--IR-IRSISTERPSLDDV 296 (302)
T ss_pred HhhhhhccccceeeeecCCeEEEEEcCchhHHHHHHHHHHHCC--Cc-eEEEEcCCCCHHHH
Confidence 011112222222334455555432234567777776543 45 88999999999985
No 131
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=327.69 Aligned_cols=216 Identities=19% Similarity=0.243 Sum_probs=178.6
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC----CCeeEEEEcccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP----VSSGTAKIYDHD 118 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~----~~~G~v~~~g~~ 118 (601)
+..+++|++.|+......++|+|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++|.+
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGs--GKSTL------~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS--GKSVS------SLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCC--hHHHH------HHHHHcCCCCCCCCcceEEEECCEE
Confidence 345899999997655456799999999988 999999 56654 469999998 489999999999
Q ss_pred CCCc-hH---H-hcccEEEEccCC--CCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCCc---ccCCccccC
Q psy7365 119 IRTD-MT---T-IRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIPH---KRTSLANTL 187 (601)
Q Consensus 119 ~~~~-~~---~-~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~---~~~~~~~~L 187 (601)
+... .. . .++.+|||||+| .+++.+|+.+++....... +.++.+.++++.++++.+||.+ ..++++++|
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~L 154 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQL 154 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhC
Confidence 8542 11 2 234799999998 4889999999988766543 4566667788999999999974 468999999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
|||||||++||+| ++.+
T Consensus 155 SgGq~QRv~iArA--------------------------------------L~~~------------------------- 171 (326)
T PRK11022 155 SGGMSQRVMIAMA--------------------------------------IACR------------------------- 171 (326)
T ss_pred CHHHHHHHHHHHH--------------------------------------HHhC-------------------------
Confidence 9999999975443 2233
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|++||+||||++||+.++..++++|++++ +..|.|+|++|||++++..+||||++|.+|+++..|+
T Consensus 172 ----------P~llilDEPts~LD~~~~~~il~lL~~l~----~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~ 237 (326)
T PRK11022 172 ----------PKLLIADEPTTALDVTIQAQIIELLLELQ----QKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGK 237 (326)
T ss_pred ----------CCEEEEeCCCCCCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 58999999999999999999999999984 2358999999999999999999999999999998876
Q ss_pred cc
Q psy7365 348 SV 349 (601)
Q Consensus 348 ~~ 349 (601)
..
T Consensus 238 ~~ 239 (326)
T PRK11022 238 AH 239 (326)
T ss_pred HH
Confidence 53
No 132
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=320.03 Aligned_cols=208 Identities=25% Similarity=0.332 Sum_probs=176.6
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.+++|++.|+. +.++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~~~ 71 (274)
T PRK13644 3 RLENVSYSYPD---GTPALENINLVIKKGEYIGIIGKNGS--GKSTL------ALHLNGLLRPQKGKVLVSGIDTGDFSK 71 (274)
T ss_pred EEEEEEEEcCC---CCceeeeeEEEEeCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCEECCcccc
Confidence 47899999842 24599999999988 999999 56665 6799999999999999999988542
Q ss_pred hHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 123 MTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
....++.+||+||+|. .|+..|+.||+.|+....+.++.+..+++.++++.+||.+..++++.+||||||||+++|+||
T Consensus 72 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral 151 (274)
T PRK13644 72 LQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGIL 151 (274)
T ss_pred HHHHHhheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHH
Confidence 3455678999999986 477789999999887666677777777889999999999999999999999999999865433
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+.+ |+++
T Consensus 152 --------------------------------------~~~-----------------------------------p~ll 158 (274)
T PRK13644 152 --------------------------------------TME-----------------------------------PECL 158 (274)
T ss_pred --------------------------------------HcC-----------------------------------CCEE
Confidence 233 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||||||+|||+.++..+++.|+++. .+|.|||++||+++++. .||++++|.+|+++..+++
T Consensus 159 lLDEPt~gLD~~~~~~l~~~l~~l~-----~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~~~g~~ 219 (274)
T PRK13644 159 IFDEVTSMLDPDSGIAVLERIKKLH-----EKGKTIVYITHNLEELH-DADRIIVMDRGKIVLEGEP 219 (274)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHH-----hCCCEEEEEecCHHHHh-hCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999873 35899999999999985 6999999999999877653
No 133
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.5e-37 Score=313.55 Aligned_cols=206 Identities=25% Similarity=0.345 Sum_probs=173.6
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC-----eeEEEEccccC
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS-----SGTAKIYDHDI 119 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~-----~G~v~~~g~~~ 119 (601)
.+++|++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++|+ +|+|.++|.++
T Consensus 3 ~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~p~~~~~~~G~i~~~g~~~ 70 (247)
T TIGR00972 3 EIENLNLFYGE----KEALKNINLDIPKNQVTALIGPSGC--GKSTL------LRSLNRMNDLVPGVRIEGKVLFDGQDI 70 (247)
T ss_pred EEEEEEEEECC----eeeecceeEEECCCCEEEEECCCCC--CHHHH------HHHHhccCCCCcCCCCceEEEECCEEc
Confidence 47899999864 3599999999988 999999 56665 67999999998 99999999987
Q ss_pred CC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcC-CChHHHHHHHHHHHHHcCCC----cccCCccccCChHH
Q psy7365 120 RT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQ-VPKDLAQLEISNMIGDLGIP----HKRTSLANTLSGGM 191 (601)
Q Consensus 120 ~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG~ 191 (601)
.. .....++.+||+||++.+|+ .|+.||+.+.....+ .+..+...++.++++.+|+. +..++++.+|||||
T Consensus 71 ~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~ 149 (247)
T TIGR00972 71 YDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQ 149 (247)
T ss_pred cccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHH
Confidence 53 23345678999999999988 999999998765555 24455567788999999998 77899999999999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+| +.+
T Consensus 150 ~qrv~laral--------------------------------------~~~----------------------------- 162 (247)
T TIGR00972 150 QQRLCIARAL--------------------------------------AVE----------------------------- 162 (247)
T ss_pred HHHHHHHHHH--------------------------------------hcC-----------------------------
Confidence 9999765432 222
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. . ++|+|++||+++++..+||++++|.+|+++..+.+
T Consensus 163 ------p~llllDEPt~~LD~~~~~~l~~~l~~~~-----~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (247)
T TIGR00972 163 ------PEVLLLDEPTSALDPIATGKIEELIQELK-----K-KYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPT 227 (247)
T ss_pred ------CCEEEEeCCcccCCHHHHHHHHHHHHHHH-----h-cCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999873 2 48999999999999999999999999998876643
No 134
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.5e-37 Score=308.04 Aligned_cols=196 Identities=23% Similarity=0.397 Sum_probs=163.0
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++. .
T Consensus 2 ~~~l~~~~~~----~~~l~~isl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~p~~G~i~~~g~~~~----~ 65 (213)
T cd03235 2 VEDLTVSYGG----HPVLEDVSFEVKPGEFLAIVGPNGA--GKSTL------LKAILGLLKPTSGSIRVFGKPLE----K 65 (213)
T ss_pred cccceeEECC----EEeeecceeEEcCCCEEEEECCCCC--CHHHH------HHHHcCCCCCCCCEEEECCccHH----H
Confidence 6789999864 3599999999988 999999 56665 57999999999999999998763 3
Q ss_pred hcccEEEEccCCCCC--CCCCHHHHHHHhHhhcC----CChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 126 IRRSLGVCPQYNALF--DKLTVEEHMWFYSQLKQ----VPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~--~~~tv~e~l~~~~~~~~----~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
.++.+||+||++.++ +.+||.||+.++..... .......+++.++++.+|+.+..++++.+||||||||+++||
T Consensus 66 ~~~~i~~v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 66 ERKRIGYVPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred HHhheEEeccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHH
Confidence 466899999998763 34899999988654221 223344567889999999998899999999999999998644
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
|| +.+ |+
T Consensus 146 al--------------------------------------~~~-----------------------------------p~ 152 (213)
T cd03235 146 AL--------------------------------------VQD-----------------------------------PD 152 (213)
T ss_pred HH--------------------------------------HcC-----------------------------------CC
Confidence 32 222 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
++||||||+|||+.++..+++.|+++. .+|.|+|++||+++++..+||++++|.+|.
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~ 209 (213)
T cd03235 153 LLLLDEPFAGVDPKTQEDIYELLRELR-----REGMTILVVTHDLGLVLEYFDRVLLLNRTV 209 (213)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHhcCEEEEEcCcE
Confidence 999999999999999999999999873 258999999999999999999999998763
No 135
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-37 Score=318.37 Aligned_cols=208 Identities=19% Similarity=0.272 Sum_probs=175.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC---
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT--- 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~--- 121 (601)
.++||++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 3 ~~~~l~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~~~~~ 70 (271)
T PRK13638 3 ATSDLWFRYQD----EPVLKGLNLDFSLSPVTGLVGANGC--GKSTL------FMNLSGLLRPQKGAVLWQGKPLDYSKR 70 (271)
T ss_pred EEEEEEEEcCC----cccccceEEEEcCCCEEEEECCCCC--CHHHH------HHHHcCCCCCCccEEEECCEEcccccC
Confidence 47899999863 3599999999988 999999 56665 579999999999999999998742
Q ss_pred chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 122 DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
.....++.+||+||++. .++..++.+|+.++....+.+..+...++.++++.+|+.+..++++.+||||||||+++||+
T Consensus 71 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~lara 150 (271)
T PRK13638 71 GLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGA 150 (271)
T ss_pred CHHHHHhheEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHH
Confidence 22345678999999986 34567899999987666666666666778899999999998999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 151 L--------------------------------------~~~-----------------------------------p~l 157 (271)
T PRK13638 151 L--------------------------------------VLQ-----------------------------------ARY 157 (271)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 3 222 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+.++..++++|+++. .+|.|||++||+++++..+||++++|.+|+++..+++
T Consensus 158 llLDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 220 (271)
T PRK13638 158 LLLDEPTAGLDPAGRTQMIAIIRRIV-----AQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAP 220 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999873 3489999999999999999999999999999877654
No 136
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=318.93 Aligned_cols=212 Identities=23% Similarity=0.352 Sum_probs=179.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..+++|++.|+. ..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|+++|.++.. .
T Consensus 4 l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~NGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~~ 72 (277)
T PRK13652 4 IETRDLCYSYSG---SKEALNNINFIAPRNSRIAVIGPNGA--GKSTL------FRHFNGILKPTSGSVLIRGEPITKEN 72 (277)
T ss_pred EEEEEEEEEeCC---CCceeeEeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEECCcCC
Confidence 458999999842 23599999999988 999999 56655 579999999999999999998754 3
Q ss_pred hHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 123 MTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
....++.+||+||++. .++..||.||+.++....+.+++...+++.++++.+||.+..++.+.+||||||||+++||||
T Consensus 73 ~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL 152 (277)
T PRK13652 73 IREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVI 152 (277)
T ss_pred HHHHHhheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 3456778999999984 445789999999877666677777777889999999999999999999999999999754432
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+.+ |+++
T Consensus 153 --------------------------------------~~~-----------------------------------p~ll 159 (277)
T PRK13652 153 --------------------------------------AME-----------------------------------PQVL 159 (277)
T ss_pred --------------------------------------HcC-----------------------------------CCEE
Confidence 233 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
||||||+|||+.++..++++|+++. +..|.|||++||+++++.+.|||+++|.+|+++..+++.
T Consensus 160 ilDEPt~gLD~~~~~~l~~~l~~l~----~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~ 223 (277)
T PRK13652 160 VLDEPTAGLDPQGVKELIDFLNDLP----ETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVE 223 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHH
Confidence 9999999999999999999999884 224899999999999999999999999999998877543
No 137
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=312.96 Aligned_cols=209 Identities=27% Similarity=0.450 Sum_probs=175.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD- 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~- 122 (601)
..+++|++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|+++|.++...
T Consensus 4 l~~~~l~~~~~~----~~~l~~~sl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~ 71 (241)
T PRK10895 4 LTAKNLAKAYKG----RRVVEDVSLTVNSGEIVGLLGPNGA--GKTTT------FYMVVGIVPRDAGNIIIDDEDISLLP 71 (241)
T ss_pred EEEeCcEEEeCC----EEEEeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEECCCCC
Confidence 458999999853 4699999999988 999999 56665 6799999999999999999987542
Q ss_pred h-HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 M-TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 ~-~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
. ...++.+||+||++.+|+.+||.||+.++.... +.++.+.+.++.++++.+|+.+..++++.+||||||||+++||+
T Consensus 72 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lara 151 (241)
T PRK10895 72 LHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARA 151 (241)
T ss_pred HHHHHHhCeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHH
Confidence 2 234678999999999999999999998865433 24444556678899999999988899999999999999986443
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 152 l--------------------------------------~~~-----------------------------------p~l 158 (241)
T PRK10895 152 L--------------------------------------AAN-----------------------------------PKF 158 (241)
T ss_pred H--------------------------------------hcC-----------------------------------CCE
Confidence 2 222 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+.++..+++++.++. ..|+|+|++||+++++..+||++++|.+|+++..++.
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~ 221 (241)
T PRK10895 159 ILLDEPFAGVDPISVIDIKRIIEHLR-----DSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTP 221 (241)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHH-----hcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCH
Confidence 99999999999999999999998873 3589999999999999999999999999998876643
No 138
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=319.80 Aligned_cols=213 Identities=25% Similarity=0.366 Sum_probs=178.9
Q ss_pred hhhcccccccccCC--CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 50 SLFESLSENRDKLG--IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
..+++|++.|+... ....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++..
T Consensus 5 l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~i~g~~i~~ 76 (280)
T PRK13633 5 IKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGS--GKSTI------AKHMNALLIPSEGKVYVDGLDTSD 76 (280)
T ss_pred EEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEeccc
Confidence 45899999986432 135699999999988 999999 56665 579999999999999999998854
Q ss_pred c--hHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhch
Q psy7365 122 D--MTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNV 198 (601)
Q Consensus 122 ~--~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~ 198 (601)
. ....++.+||+||+|. .+...||.+|+.|+....+.++.+.++++.++++.+||.+..++++.+||||||||+++|
T Consensus 77 ~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~la 156 (280)
T PRK13633 77 EENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIA 156 (280)
T ss_pred cccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHH
Confidence 2 3446778999999985 344579999999987777777777778899999999999999999999999999999865
Q ss_pred hhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCC
Q psy7365 199 KVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPA 278 (601)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 278 (601)
++| +.+ |
T Consensus 157 ral--------------------------------------~~~-----------------------------------p 163 (280)
T PRK13633 157 GIL--------------------------------------AMR-----------------------------------P 163 (280)
T ss_pred HHH--------------------------------------HcC-----------------------------------C
Confidence 432 233 5
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 279 STVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 279 ~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+++||||||+|||+.++..+++.|+++. +..|.|||++||+++++.. ||++++|.+|+++..+++
T Consensus 164 ~llllDEPt~gLD~~~~~~l~~~l~~l~----~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~ 228 (280)
T PRK13633 164 ECIIFDEPTAMLDPSGRREVVNTIKELN----KKYGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTP 228 (280)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCH
Confidence 8999999999999999999999999883 2248999999999999976 999999999999877654
No 139
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.8e-37 Score=314.23 Aligned_cols=208 Identities=21% Similarity=0.305 Sum_probs=175.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC--
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-- 121 (601)
..+++|++.|+. ..+++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++..
T Consensus 6 l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~ 73 (257)
T PRK10619 6 LNVIDLHKRYGE----HEVLKGVSLQANAGDVISIIGSSGS--GKSTF------LRCINFLEKPSEGSIVVNGQTINLVR 73 (257)
T ss_pred EEEeeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEECCEEccccc
Confidence 458999999863 4599999999988 999999 56665 579999999999999999988742
Q ss_pred ------------chHHhcccEEEEccCCCCCCCCCHHHHHHHhH-hhcCCChHHHHHHHHHHHHHcCCCcc-cCCccccC
Q psy7365 122 ------------DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYS-QLKQVPKDLAQLEISNMIGDLGIPHK-RTSLANTL 187 (601)
Q Consensus 122 ------------~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~L 187 (601)
.....++++||+||++.+|+.+|++||+.++. ...+....+.+.++.++++.+|+.+. .++++.+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~L 153 (257)
T PRK10619 74 DKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHL 153 (257)
T ss_pred ccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccC
Confidence 12345678999999999999999999998754 33445555566788999999999876 48899999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
|||||||+++||+| +.+
T Consensus 154 S~G~~qrv~laral--------------------------------------~~~------------------------- 170 (257)
T PRK10619 154 SGGQQQRVSIARAL--------------------------------------AME------------------------- 170 (257)
T ss_pred CHHHHHHHHHHHHH--------------------------------------hcC-------------------------
Confidence 99999999865432 233
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.+++.++++|+++. ..|+|||++||+++++..+|||+++|.+|+++..++
T Consensus 171 ----------p~llllDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 171 ----------PEVLLFDEPTSALDPELVGEVLRIMQQLA-----EEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred ----------CCEEEEeCCcccCCHHHHHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 58999999999999999999999999873 358999999999999999999999999999987664
No 140
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-37 Score=315.36 Aligned_cols=216 Identities=25% Similarity=0.318 Sum_probs=175.7
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. .
T Consensus 3 l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~p~~G~i~~~g~~~~~~~ 70 (258)
T PRK13548 3 LEARNLSVRLGG----RTLLDDVSLTLRPGEVVAILGPNGA--GKSTL------LRALSGELSPDSGEVRLNGRPLADWS 70 (258)
T ss_pred EEEEeEEEEeCC----eeeeeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCEEEECCEEcccCC
Confidence 348899999864 3599999999988 999999 56665 679999999999999999998753 2
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
....++.+||+||++.+++.+||+||+.++....+......+.++.++++.+|+.+..++.+.+||||||||+++||+|+
T Consensus 71 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~ 150 (258)
T PRK13548 71 PAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLA 150 (258)
T ss_pred HHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHh
Confidence 33455689999999998888999999988654444333444567889999999999899999999999999998654332
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
.+| .| -.+|+++|
T Consensus 151 ~~~------------------------------------~~-------------------------------~~~p~lll 163 (258)
T PRK13548 151 QLW------------------------------------EP-------------------------------DGPPRWLL 163 (258)
T ss_pred ccc------------------------------------cc-------------------------------CCCCCEEE
Confidence 100 00 01368999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||||+|||+.++..+.+.|+++. +..|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 164 LDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 225 (258)
T PRK13548 164 LDEPTSALDLAHQHHVLRLARQLA----HERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTP 225 (258)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCH
Confidence 999999999999999999999873 13589999999999999999999999999998766543
No 141
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-37 Score=306.19 Aligned_cols=203 Identities=23% Similarity=0.343 Sum_probs=166.6
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|++. . .|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++....
T Consensus 2 ~~~~l~~~~~~~----~--~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~gl~~~~~G~i~~~g~~~~~~~- 66 (211)
T cd03298 2 RLDKIRFSYGEQ----P--MHFDLTFAQGEITAIVGPSGS--GKSTL------LNLIAGFETPQSGRVLINGVDVTAAP- 66 (211)
T ss_pred EEEeEEEEeCCE----e--cceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEEcCcCC-
Confidence 378999998532 1 299999988 999999 56665 57999999999999999999875422
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.+||+||++.+|+.+|+.||+.++.........+.+.++.++++.+|+.+..++++.+||||||||+++||++
T Consensus 67 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al--- 143 (211)
T cd03298 67 PADRPVSMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVL--- 143 (211)
T ss_pred HhHccEEEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHH---
Confidence 23467999999999999999999998764321111223456788999999999989999999999999999754432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 144 -----------------------------------~~~-----------------------------------p~llllD 153 (211)
T cd03298 144 -----------------------------------VRD-----------------------------------KPVLLLD 153 (211)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEc
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|||+|||+.++..+++.|+++. +..|.|+|++||+++++..+||++++|.+|+++..
T Consensus 154 EP~~~LD~~~~~~l~~~l~~~~----~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~ 210 (211)
T cd03298 154 EPFAALDPALRAEMLDLVLDLH----AETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQ 210 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeec
Confidence 9999999999999999999873 23489999999999999999999999999997643
No 142
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-37 Score=314.23 Aligned_cols=212 Identities=22% Similarity=0.296 Sum_probs=173.7
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
.+..++|+++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~ 71 (255)
T PRK11300 4 PLLSVSGLMMRFGG----LLAVNNVNLEVREQEIVSLIGPNGA--GKTTV------FNCLTGFYKPTGGTILLRGQHIEG 71 (255)
T ss_pred ceEEEeeEEEEECC----EEEEEeeeeEEcCCeEEEEECCCCC--CHHHH------HHHHhCCcCCCcceEEECCEECCC
Confidence 45669999999853 4699999999988 999999 57665 579999999999999999998754
Q ss_pred c-h-HHhcccEEEEccCCCCCCCCCHHHHHHHhHhh----------cCC---C--hHHHHHHHHHHHHHcCCCcccCCcc
Q psy7365 122 D-M-TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL----------KQV---P--KDLAQLEISNMIGDLGIPHKRTSLA 184 (601)
Q Consensus 122 ~-~-~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~----------~~~---~--~~~~~~~~~~~l~~~gl~~~~~~~~ 184 (601)
. . ...+..++|+||++.+|+.+||.||+.++... .+. . ..+...++.++++.+|+.+..++++
T Consensus 72 ~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 151 (255)
T PRK11300 72 LPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQA 151 (255)
T ss_pred CCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCCh
Confidence 2 2 22345699999999999999999999986431 110 1 1123456788999999999999999
Q ss_pred ccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhH
Q psy7365 185 NTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSIL 264 (601)
Q Consensus 185 ~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 264 (601)
.+||||||||+++||+| +.+
T Consensus 152 ~~LS~G~~qrv~la~al--------------------------------------~~~---------------------- 171 (255)
T PRK11300 152 GNLAYGQQRRLEIARCM--------------------------------------VTQ---------------------- 171 (255)
T ss_pred hhCCHHHHHHHHHHHHH--------------------------------------hcC----------------------
Confidence 99999999999865432 233
Q ss_pred HHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccc
Q psy7365 265 VAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQC 344 (601)
Q Consensus 265 ~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~ 344 (601)
|+++||||||+|||+.++..++++|.++. +..|.|||++||+++++..+||++++|.+|+++.
T Consensus 172 -------------p~llllDEPt~~LD~~~~~~l~~~L~~~~----~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 234 (255)
T PRK11300 172 -------------PEILMLDEPAAGLNPKETKELDELIAELR----NEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLA 234 (255)
T ss_pred -------------CCEEEEcCCccCCCHHHHHHHHHHHHHHH----hhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEe
Confidence 58999999999999999999999999873 2248999999999999999999999999999887
Q ss_pred ccCc
Q psy7365 345 CGSS 348 (601)
Q Consensus 345 ~G~~ 348 (601)
.+.+
T Consensus 235 ~~~~ 238 (255)
T PRK11300 235 NGTP 238 (255)
T ss_pred cCCH
Confidence 6643
No 143
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.2e-37 Score=310.75 Aligned_cols=208 Identities=23% Similarity=0.309 Sum_probs=172.9
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD- 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~- 122 (601)
..++++++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 i~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~p~~G~i~~~g~~~~~~~ 70 (242)
T TIGR03411 3 LYLEGLSVSFDG----FKALNDLSLYVDPGELRVIIGPNGA--GKTTM------MDVITGKTRPDEGSVLFGGTDLTGLP 70 (242)
T ss_pred EEEEeeEEEcCC----eEEeeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCCeEEECCeecCCCC
Confidence 358899999853 3599999999988 999999 56665 6799999999999999999987542
Q ss_pred hH-HhcccEEEEccCCCCCCCCCHHHHHHHhHhhc--------CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHh
Q psy7365 123 MT-TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK--------QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQR 193 (601)
Q Consensus 123 ~~-~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~--------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~q 193 (601)
.. ..++.+||+||++.+|+.+||.||+.++.... +...++.+.++.++++.+|+.+..++.+.+|||||||
T Consensus 71 ~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~q 150 (242)
T TIGR03411 71 EHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQ 150 (242)
T ss_pred HHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHH
Confidence 22 23457999999999999999999998864311 1223345567899999999999899999999999999
Q ss_pred hhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhh
Q psy7365 194 KLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAM 273 (601)
Q Consensus 194 r~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 273 (601)
|+++||||+ ++
T Consensus 151 rv~laral~--------------------------------------~~------------------------------- 161 (242)
T TIGR03411 151 WLEIGMLLM--------------------------------------QD------------------------------- 161 (242)
T ss_pred HHHHHHHHh--------------------------------------cC-------------------------------
Confidence 998654332 32
Q ss_pred ccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 274 SFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 274 ~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++++|||||+|||+.++..++++|+++. +++|+|++||+++++..+||++++|.+|+++..++.
T Consensus 162 ----p~~lllDEPt~~LD~~~~~~l~~~l~~~~------~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~ 226 (242)
T TIGR03411 162 ----PKLLLLDEPVAGMTDEETEKTAELLKSLA------GKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSL 226 (242)
T ss_pred ----CCEEEecCCccCCCHHHHHHHHHHHHHHh------cCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCH
Confidence 58999999999999999999999999872 268999999999999999999999999998876643
No 144
>KOG0054|consensus
Probab=100.00 E-value=1.7e-36 Score=358.88 Aligned_cols=141 Identities=23% Similarity=0.328 Sum_probs=117.2
Q ss_pred ccccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcc-------ccccc----CcCChHHHHHH
Q psy7365 371 KSYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHY-------SDREV----RTLSGGNKRKL 439 (601)
Q Consensus 371 ~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~-------~~~~~----~~LSgGqkQRl 439 (601)
|++++++||+|.+|.. |+|.||.=+... .++.+-++||..+|.+. +|.++ .++|-||||-+
T Consensus 1213 RsrlsIIPQdPvLFsG-TvR~NLDPf~e~-------sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLl 1284 (1381)
T KOG0054|consen 1213 RSRLSIIPQDPVLFSG-TVRFNLDPFDEY-------SDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLL 1284 (1381)
T ss_pred HhcCeeeCCCCceecC-ccccccCccccc-------CHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHH
Confidence 5689999999999875 999998643221 12345666666665432 23333 56999999999
Q ss_pred HHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 440 STAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 440 ~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+|||||+.+++||+|||.|+.+|+++-..+.+.|++-- +++|||.+-|.++-+.. ||||+||++|+++..|+|.+|.+
T Consensus 1285 CLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTVltIAHRl~TVmd-~DrVlVld~G~v~EfdsP~~Ll~ 1362 (1381)
T KOG0054|consen 1285 CLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTVLTIAHRLNTVMD-SDRVLVLDAGRVVEFDSPAELLS 1362 (1381)
T ss_pred HHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeEEEEeeccchhhh-cCeEEEeeCCeEeecCChHHHHh
Confidence 99999999999999999999999999999999999843 47999999999999998 89999999999999999999986
Q ss_pred Hh
Q psy7365 520 KY 521 (601)
Q Consensus 520 ~~ 521 (601)
+.
T Consensus 1363 ~~ 1364 (1381)
T KOG0054|consen 1363 DK 1364 (1381)
T ss_pred CC
Confidence 53
No 145
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=305.44 Aligned_cols=205 Identities=20% Similarity=0.340 Sum_probs=181.1
Q ss_pred ccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc-------cccccccccccccccCCc---ccccccccCCCC
Q psy7365 311 SLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF-------LKNSFARGYYLSLDMKSA---PQKSYIGYCPQF 380 (601)
Q Consensus 311 ~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l-------Lk~~~g~g~~igld~~~~---~~~~~ig~v~Q~ 380 (601)
.+.+++++ .++++-..-++.+++++... +|+++. +.++.|+.++.+.++... ..|++|||+-|.
T Consensus 10 ~y~~~~av---~~v~l~I~~gef~vliGpSG---sGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYviQq 83 (309)
T COG1125 10 RYGNKKAV---DDVNLTIEEGEFLVLIGPSG---SGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYVIQQ 83 (309)
T ss_pred hcCCceee---eeeeEEecCCeEEEEECCCC---CcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhhhhh
Confidence 34566666 78888888899999997532 555543 345667777777666543 358999999999
Q ss_pred cccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC--cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCC
Q psy7365 381 DALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG--HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPT 458 (601)
Q Consensus 381 ~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~--~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPT 458 (601)
.++||++||.||+.+...+.++++++.+++++++|+.+||. ++.+|+|.+|||||||||.+||||+.+|+++++|||+
T Consensus 84 igLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPF 163 (309)
T COG1125 84 IGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILLMDEPF 163 (309)
T ss_pred cccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCc
Confidence 99999999999999999999999999999999999999997 4899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHh
Q psy7365 459 SGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKY 521 (601)
Q Consensus 459 sGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~ 521 (601)
++|||.+|..+.+.++++.++ |+||+++|||++|+..++|||++|++|+++..++|+++.++.
T Consensus 164 gALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 164 GALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred cccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999776 999999999999999999999999999999999999987643
No 146
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=6.6e-37 Score=308.84 Aligned_cols=197 Identities=23% Similarity=0.359 Sum_probs=166.8
Q ss_pred CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHHhcccEEEEc-cC
Q psy7365 64 IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCP-QY 136 (601)
Q Consensus 64 ~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~-Q~ 136 (601)
+..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.......++.+||+| |.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGs--GKSTL------l~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~ 103 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGA--GKTTT------LKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQK 103 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCc
Confidence 446699999999988 999999 56665 6799999999999999999876443344567899998 55
Q ss_pred CCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhh
Q psy7365 137 NALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNA 216 (601)
Q Consensus 137 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~ 216 (601)
+.+|+.+|+.||+.+.....+....+...++.++++.+|+.+..++++.+||||||||+++|+++
T Consensus 104 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al--------------- 168 (236)
T cd03267 104 TQLWWDLPVIDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPVRQLSLGQRMRAEIAAAL--------------- 168 (236)
T ss_pred cccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHH---------------
Confidence 77888999999999877666666666667788999999999889999999999999999754332
Q ss_pred hhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHH
Q psy7365 217 ANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRR 296 (601)
Q Consensus 217 ~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~ 296 (601)
+.+ |+++||||||+|||+.+++
T Consensus 169 -----------------------~~~-----------------------------------p~llllDEPt~~LD~~~~~ 190 (236)
T cd03267 169 -----------------------LHE-----------------------------------PEILFLDEPTIGLDVVAQE 190 (236)
T ss_pred -----------------------hcC-----------------------------------CCEEEEcCCCCCCCHHHHH
Confidence 232 5899999999999999999
Q ss_pred HHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 297 SIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 297 ~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
.++++|+++. +..|.|||++||+++++..+||++++|.+|++...
T Consensus 191 ~l~~~l~~~~----~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 235 (236)
T cd03267 191 NIRNFLKEYN----RERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYD 235 (236)
T ss_pred HHHHHHHHHH----hcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEec
Confidence 9999999873 23478999999999999999999999999998653
No 147
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.4e-37 Score=324.22 Aligned_cols=217 Identities=21% Similarity=0.261 Sum_probs=180.3
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC---eeEEEEcccc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS---SGTAKIYDHD 118 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~---~G~v~~~g~~ 118 (601)
.+..++||++.|+..++...+++|+||++.+ +|+||| ||||| .++|+|+++|+ +|+|.++|.+
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGs--GKSTL------~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGS--GKSQT------AFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCc--hHHHH------HHHHHcCCCCCCCCCeEEEECCEE
Confidence 3566999999997655567799999999988 999999 56655 46999999996 9999999999
Q ss_pred CCCc-hH---Hhc-ccEEEEccCC--CCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCCcc---cCCccccC
Q psy7365 119 IRTD-MT---TIR-RSLGVCPQYN--ALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIPHK---RTSLANTL 187 (601)
Q Consensus 119 ~~~~-~~---~~~-~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~---~~~~~~~L 187 (601)
+..- .. ..| +.|+||||+| .+++.+|+.+++.+....+ +.+..+...++.++++.+||.+. .++++.+|
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~L 162 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEF 162 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccC
Confidence 8542 22 223 4799999998 5889999999998766554 35666777889999999999753 47899999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
||||+||++||+|| +.+
T Consensus 163 SgG~~QRv~IArAL--------------------------------------~~~------------------------- 179 (330)
T PRK09473 163 SGGMRQRVMIAMAL--------------------------------------LCR------------------------- 179 (330)
T ss_pred CHHHHHHHHHHHHH--------------------------------------HcC-------------------------
Confidence 99999999754432 233
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|++||+||||++||+.++..++++|++++ +..|.|+|++|||++++..+|||+++|.+|+++..|.
T Consensus 180 ----------P~llilDEPts~LD~~~~~~i~~lL~~l~----~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~ 245 (330)
T PRK09473 180 ----------PKLLIADEPTTALDVTVQAQIMTLLNELK----REFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGN 245 (330)
T ss_pred ----------CCEEEEeCCCccCCHHHHHHHHHHHHHHH----HHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 58999999999999999999999999984 2348999999999999999999999999999998876
Q ss_pred cc
Q psy7365 348 SV 349 (601)
Q Consensus 348 ~~ 349 (601)
..
T Consensus 246 ~~ 247 (330)
T PRK09473 246 AR 247 (330)
T ss_pred HH
Confidence 53
No 148
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.2e-36 Score=373.76 Aligned_cols=275 Identities=27% Similarity=0.472 Sum_probs=233.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc--ccccccccCCCCcccCCCCCHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA--PQKSYIGYCPQFDALNDRLTPREH 392 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~--~~~~~ig~v~Q~~~l~~~lTv~E~ 392 (601)
+++++-..-++.+++++... .|+++++ +++.|..++.|.++... ..++.+|||||++.+++.+||+||
T Consensus 947 ~~lsl~I~~Gei~aLLG~NG---AGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~ 1023 (2272)
T TIGR01257 947 DRLNITFYENQITAFLGHNG---AGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLTVAEH 1023 (2272)
T ss_pred EeeEEEEcCCcEEEEECCCC---ChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCCHHHH
Confidence 77777777888888887422 4555433 33445555555544321 235679999999999999999999
Q ss_pred HHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHH
Q psy7365 393 LEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTC 472 (601)
Q Consensus 393 L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~l 472 (601)
+.|+.++++.+.++.+++++++++.++|.+..++++++|||||||||+||+||+++|+++||||||+||||.+++.+|++
T Consensus 1024 L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~l 1103 (2272)
T TIGR01257 1024 ILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDL 1103 (2272)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH
Confidence 99998888876666667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEecCC------------------
Q psy7365 473 IERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCAEG------------------ 534 (601)
Q Consensus 473 L~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~~~------------------ 534 (601)
|++++ +|+|||++||++++++.+||||++|++|++++.|++++|+++++.+|.+++.....
T Consensus 1104 L~~l~-~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~g~gy~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1182 (2272)
T TIGR01257 1104 LLKYR-SGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRKMKNIQSQRGGCEGTCSCTSK 1182 (2272)
T ss_pred HHHHh-CCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhcCCcEEEEEEeccccccccccccccccccccc
Confidence 99984 69999999999999999999999999999999999999999999999988754310
Q ss_pred ---------------------CchhHHHHHhhcCCCceeEEeeCcEEEEEEcCCc---ccHHHHHHHHHHccccCCCeeE
Q psy7365 535 ---------------------RSADAQTYLSLNLPVADLVETHATQLQYRISGAV---SDLGALFRTLESAKTEAGLIVD 590 (601)
Q Consensus 535 ---------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~L~~~~~~~~~i~~ 590 (601)
....+.+++...+|++...+..+.+++|.+|... ..++.+|+.|++...+++ |.+
T Consensus 1183 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~iP~a~l~~~~g~el~y~LP~~~~~~~~f~~lf~~Le~~~~~lg-i~s 1261 (2272)
T TIGR01257 1183 GFSTRCPARVDEITPEQVLDGDVNELMDLVYHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLG-LSS 1261 (2272)
T ss_pred ccccccccccccccccccccccHHHHHHHHHHhCCCcEEEeccCCEEEEEecccccccchHHHHHHHHHhhHhhCC-Cce
Confidence 1234566788889999998889999999999764 358999999998877888 999
Q ss_pred EEecCCCCCCC
Q psy7365 591 YSLSQTSLEDS 601 (601)
Q Consensus 591 ~~v~~~sLEdv 601 (601)
|.++.+|||||
T Consensus 1262 ygis~tTLEeV 1272 (2272)
T TIGR01257 1262 FGISDTPLEEI 1272 (2272)
T ss_pred EEeecCCHHHH
Confidence 99999999986
No 149
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=304.65 Aligned_cols=212 Identities=25% Similarity=0.378 Sum_probs=179.4
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC--
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-- 121 (601)
..+++|+-.||+. ++|.||||++.+ +||||+ ||||| .+.|+|+++|.+|+|.++|+|++.
T Consensus 4 L~v~~l~~~YG~~----~~L~gvsl~v~~Geiv~llG~NGa--GKTTl------Lkti~Gl~~~~~G~I~~~G~dit~~p 71 (237)
T COG0410 4 LEVENLSAGYGKI----QALRGVSLEVERGEIVALLGRNGA--GKTTL------LKTIMGLVRPRSGRIIFDGEDITGLP 71 (237)
T ss_pred eeEEeEeecccce----eEEeeeeeEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCeeEEECCeecCCCC
Confidence 4588999998874 499999999988 999999 56654 579999999999999999999975
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcC-CCcccCCccccCChHHHhhhhchhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLG-IPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
++...|.+++||||.-.+|+.+||+||+..++....- +...+..++++.+.|- |.+.++++.++|||||||.+++|||
T Consensus 72 ~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRA 150 (237)
T COG0410 72 PHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARA 150 (237)
T ss_pred HHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHH
Confidence 4556788999999999999999999999987655432 1222223788899997 7889999999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
|+ .+ |++
T Consensus 151 Lm--------------------------------------~~-----------------------------------Pkl 157 (237)
T COG0410 151 LM--------------------------------------SR-----------------------------------PKL 157 (237)
T ss_pred Hh--------------------------------------cC-----------------------------------CCE
Confidence 32 22 599
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
|+|||||.||-|.-..++.+.|++++ +..|.||++++++..++.+++||.++|.+|+++..|+...+
T Consensus 158 LLLDEPs~GLaP~iv~~I~~~i~~l~----~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL 224 (237)
T COG0410 158 LLLDEPSEGLAPKIVEEIFEAIKELR----KEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAEL 224 (237)
T ss_pred EEecCCccCcCHHHHHHHHHHHHHHH----HcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHH
Confidence 99999999999999999999999994 34588999999999999999999999999999999876443
No 150
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.7e-37 Score=289.00 Aligned_cols=210 Identities=23% Similarity=0.280 Sum_probs=182.8
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
++.+.+++|+-+...+....++||+|.|.+ +||||+ ||||| +-+++|+..|++|+|++.|+++.+-
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGS--GKSTL------l~vlAGLd~~ssGeV~l~G~~L~~l 77 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGS--GKSTL------LAVLAGLDDPSSGEVRLLGQPLHKL 77 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCC--cHHhH------HHHHhcCCCCCCceEEEcCcchhhc
Confidence 677899999998888899999999999988 999999 56665 4589999999999999999998642
Q ss_pred ----hHH-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 123 ----MTT-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 123 ----~~~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
... ..+.+|+|||.+.+.|+||..||++.++++.|-.....+..+.++|+.+||.+..+++|.+|||||||||+|
T Consensus 78 dEd~rA~~R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAi 157 (228)
T COG4181 78 DEDARAALRARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVAL 157 (228)
T ss_pred CHHHHHHhhccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCccccCchHHHHHHH
Confidence 222 346799999999999999999999999999986656667778899999999999999999999999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
|||+. . .
T Consensus 158 ARAfa--------------------------------------~-----------------------------------~ 164 (228)
T COG4181 158 ARAFA--------------------------------------G-----------------------------------R 164 (228)
T ss_pred HHHhc--------------------------------------C-----------------------------------C
Confidence 54321 1 2
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQC 344 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~ 344 (601)
|++||-||||.+||-.+-+.+.+++-.++ .+.|.|.+++|||...+. .|+|.+-|.+|+++.
T Consensus 165 P~vLfADEPTGNLD~~Tg~~iaDLlF~ln----re~G~TlVlVTHD~~LA~-Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 165 PDVLFADEPTGNLDRATGDKIADLLFALN----RERGTTLVLVTHDPQLAA-RCDRQLRLRSGRLVE 226 (228)
T ss_pred CCEEeccCCCCCcchhHHHHHHHHHHHHh----hhcCceEEEEeCCHHHHH-hhhheeeeecceecc
Confidence 69999999999999999999999998884 457999999999988776 699999999999864
No 151
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=296.59 Aligned_cols=198 Identities=29% Similarity=0.429 Sum_probs=177.3
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcc-------ccccccccccccccccCCcc--cccccccCCCCcccCCCCCHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSV-------FLKNSFARGYYLSLDMKSAP--QKSYIGYCPQFDALNDRLTPREH 392 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~-------lLk~~~g~g~~igld~~~~~--~~~~ig~v~Q~~~l~~~lTv~E~ 392 (601)
.|+++..+-+..+.+++... .|+++ ++.++.|..++.+.|....+ .+++||+++.+.++|..||++||
T Consensus 19 rdVSF~ae~Gei~GlLG~NG---AGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~rEn 95 (245)
T COG4555 19 RDVSFEAEEGEITGLLGENG---AGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAREN 95 (245)
T ss_pred hheeEEeccceEEEEEcCCC---CCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHHHH
Confidence 56666667777788886321 44444 34566777777787765544 58899999988999999999999
Q ss_pred HHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHH
Q psy7365 393 LEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTC 472 (601)
Q Consensus 393 L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~l 472 (601)
|.|+++++++...+.+.+++++.+.|+|.+..|++++.||.||||||+|||||+++|++++|||||||||..+++.+.++
T Consensus 96 l~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~df 175 (245)
T COG4555 96 LKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDF 175 (245)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhC
Q psy7365 473 IERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYG 522 (601)
Q Consensus 473 L~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~ 522 (601)
|++++++|++||++||+|+|++++||||+++++|+++..|+++.+..+..
T Consensus 176 i~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~~ 225 (245)
T COG4555 176 IKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDARTV 225 (245)
T ss_pred HHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988754
No 152
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-37 Score=309.82 Aligned_cols=208 Identities=22% Similarity=0.327 Sum_probs=174.4
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC---
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT--- 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~--- 121 (601)
.++++++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++..
T Consensus 4 ~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 71 (242)
T PRK11124 4 QLNGINCFYGA----HQALFDITLDCPQGETLVLLGPSGA--GKSSL------LRVLNLLEMPRSGTLNIAGNHFDFSKT 71 (242)
T ss_pred EEEeeEEEECC----eeeEeeeeeEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEecccccc
Confidence 48899999864 3599999999988 999999 56665 579999999999999999998631
Q ss_pred ----chHHhcccEEEEccCCCCCCCCCHHHHHHH-hHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhh
Q psy7365 122 ----DMTTIRRSLGVCPQYNALFDKLTVEEHMWF-YSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 122 ----~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
.....++.++|+||++.+|+.+|+.||+.+ .....+.+..+...++.++++.+|+.+..++.+.+||||||||++
T Consensus 72 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 72 PSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred cchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHH
Confidence 123456789999999999999999999975 334445555555667889999999998899999999999999997
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+||++ +.+
T Consensus 152 laral--------------------------------------~~~---------------------------------- 159 (242)
T PRK11124 152 IARAL--------------------------------------MME---------------------------------- 159 (242)
T ss_pred HHHHH--------------------------------------hcC----------------------------------
Confidence 54432 222
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|+++. .+|+|+|++||+.+++..+||++++|.+|+++..++.
T Consensus 160 -p~llilDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~ 225 (242)
T PRK11124 160 -PQVLLFDEPTAALDPEITAQIVSIIRELA-----ETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDA 225 (242)
T ss_pred -CCEEEEcCCCCcCCHHHHHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999873 3589999999999999999999999999998876543
No 153
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-37 Score=316.21 Aligned_cols=209 Identities=24% Similarity=0.375 Sum_probs=175.2
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC---
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT--- 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~--- 121 (601)
.+++|++.|+. ...+++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++..
T Consensus 3 ~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGs--GKSTL------l~~i~Gl~~~~~G~i~~~g~~~~~~~~ 71 (275)
T PRK13639 3 ETRDLKYSYPD---GTEALKGINFKAEKGEMVALLGPNGA--GKSTL------FLHFNGILKPTSGEVLIKGEPIKYDKK 71 (275)
T ss_pred EEEEEEEEeCC---CCeeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCccEEEECCEECccccc
Confidence 47899999852 23599999999988 999999 56655 579999999999999999998742
Q ss_pred chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 122 DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
.....++.+||+||++. .++..||.||+.|+....+....+..+++.++++.+||.+..++++.+|||||+||+++||+
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~lara 151 (275)
T PRK13639 72 SLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGI 151 (275)
T ss_pred hHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHH
Confidence 22345678999999984 44467999999887655555555666788999999999999999999999999999976543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
|+ . +|++
T Consensus 152 l~--------------------------------------~-----------------------------------~p~l 158 (275)
T PRK13639 152 LA--------------------------------------M-----------------------------------KPEI 158 (275)
T ss_pred Hh--------------------------------------c-----------------------------------CCCE
Confidence 32 2 2589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+||||||+|||+.++..++++|.++. .+|.|||++||+++++..+||++++|.+|+++..+++
T Consensus 159 lllDEPt~gLD~~~~~~l~~~l~~l~-----~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 221 (275)
T PRK13639 159 IVLDEPTSGLDPMGASQIMKLLYDLN-----KEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTP 221 (275)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHH-----HCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999873 2489999999999999999999999999999887754
No 154
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-37 Score=315.53 Aligned_cols=211 Identities=27% Similarity=0.398 Sum_probs=174.3
Q ss_pred hhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC--
Q psy7365 51 LFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-- 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-- 121 (601)
.+++|++.|++.. ...++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 4 ~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~Gl~~p~~G~i~~~g~~i~~~~ 75 (280)
T PRK13649 4 NLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGS--GKSTI------MQLLNGLHVPTQGSVRVDDTLITSTS 75 (280)
T ss_pred EEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEccccc
Confidence 4889999986321 124599999999988 999999 56665 679999999999999999998753
Q ss_pred ---chHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhh
Q psy7365 122 ---DMTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 122 ---~~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~ 195 (601)
.....++.+||+||++ .+| ..||.||+.|+....+.+.++.+.++.++++.+||. ...++++.+||||||||+
T Consensus 76 ~~~~~~~~~~~i~~~~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv 154 (280)
T PRK13649 76 KNKDIKQIRKKVGLVFQFPESQLF-EETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRV 154 (280)
T ss_pred cccCHHHHHhheEEEeeChhhhhc-cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHH
Confidence 2344667899999997 345 479999999877666666666667788999999997 467999999999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++|||+ +.+
T Consensus 155 ~la~al--------------------------------------~~~--------------------------------- 163 (280)
T PRK13649 155 AIAGIL--------------------------------------AME--------------------------------- 163 (280)
T ss_pred HHHHHH--------------------------------------HcC---------------------------------
Confidence 754432 232
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|||||||+|||+.+++.+++.|+++. .+|+|||++||+++++..+||++++|.+|+++..+++
T Consensus 164 --p~lllLDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 164 --PKILVLDEPTAGLDPKGRKELMTLFKKLH-----QSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred --CCEEEEeCCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999873 3489999999999999999999999999998776643
No 155
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-37 Score=303.87 Aligned_cols=199 Identities=24% Similarity=0.379 Sum_probs=165.4
Q ss_pred ccccccccCCCccceeecceEEeec-----ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-----ch
Q psy7365 54 SLSENRDKLGIDSYGISDTSLEEQP-----LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-----DM 123 (601)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-----~~ 123 (601)
+|+|.|++.. + |+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +.
T Consensus 5 ~l~~~~~~~~-----~-~vsl~i~~e~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 70 (214)
T cd03297 5 DIEKRLPDFT-----L-KIDFDLNEEVTGIFGASGA--GKSTL------LRCIAGLEKPDGGTIVLNGTVLFDSRKKINL 70 (214)
T ss_pred eeeEecCCee-----e-CceEEEcceeEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEecccccchhhh
Confidence 7899987632 3 99999976 999999 56665 579999999999999999998742 12
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
...++.+||+||++.+|+.+|+.||+.++.... .....+.++.++++.+|+.+..++++.+||||||||+++||++
T Consensus 71 ~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al-- 146 (214)
T cd03297 71 PPQQRKIGLVFQQYALFPHLNVRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARAL-- 146 (214)
T ss_pred hhHhhcEEEEecCCccCCCCCHHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHH--
Confidence 235678999999999999999999998865432 2334456788999999999888999999999999999854432
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |+++||
T Consensus 147 ------------------------------------~~~-----------------------------------p~llll 155 (214)
T cd03297 147 ------------------------------------AAQ-----------------------------------PELLLL 155 (214)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEE
Confidence 222 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
||||+|||+.+++.++++|+++. +..|+|+|++||+++++..+||++++|.+|+++..
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~----~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~ 213 (214)
T cd03297 156 DEPFSALDRALRLQLLPELKQIK----KNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYI 213 (214)
T ss_pred cCCcccCCHHHHHHHHHHHHHHH----HHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEec
Confidence 99999999999999999999873 22389999999999999999999999999998654
No 156
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=309.26 Aligned_cols=208 Identities=23% Similarity=0.318 Sum_probs=173.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~~ 118 (601)
..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.+
T Consensus 4 l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~~~~~~G~i~~~g~~ 71 (250)
T PRK14247 4 IEIRDLKVSFGQ----VEVLDGVNLEIPDNTITALMGPSGS--GKSTL------LRVFNRLIELYPEARVSGEVYLDGQD 71 (250)
T ss_pred EEEEeeEEEECC----eeeeecceeEEcCCCEEEEECCCCC--CHHHH------HHHHhccCCCCCCCCCceEEEECCEE
Confidence 458999999864 3599999999988 999999 56665 5799999974 79999999998
Q ss_pred CCC-chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC--ChHHHHHHHHHHHHHcCCCc----ccCCccccCChHH
Q psy7365 119 IRT-DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV--PKDLAQLEISNMIGDLGIPH----KRTSLANTLSGGM 191 (601)
Q Consensus 119 ~~~-~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~----~~~~~~~~LSgG~ 191 (601)
+.. +....++.+||+||++.+|+.+||.||+.++....+. +..+..+++.++++.+|+.+ ..++.+.+|||||
T Consensus 72 i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~ 151 (250)
T PRK14247 72 IFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQ 151 (250)
T ss_pred CCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHH
Confidence 854 3345667899999999989999999999987644332 33455667889999999853 5789999999999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||||+ .
T Consensus 152 ~qrv~laral~--------------------------------------~------------------------------ 163 (250)
T PRK14247 152 QQRLCIARALA--------------------------------------F------------------------------ 163 (250)
T ss_pred HHHHHHHHHHh--------------------------------------c------------------------------
Confidence 99998654332 2
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+|+++||||||+|||+.++..+++.|+++. +|.|+|++||+++++..+||++++|.+|++...++.
T Consensus 164 -----~p~lllLDEP~~~LD~~~~~~l~~~l~~~~------~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (250)
T PRK14247 164 -----QPEVLLADEPTANLDPENTAKIESLFLELK------KDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPT 229 (250)
T ss_pred -----CCCEEEEcCCCccCCHHHHHHHHHHHHHHh------cCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCH
Confidence 258999999999999999999999999872 378999999999999999999999999998776643
No 157
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.3e-36 Score=313.67 Aligned_cols=268 Identities=26% Similarity=0.411 Sum_probs=199.0
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc--ccccccccCCCCcccC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA--PQKSYIGYCPQFDALN 384 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~--~~~~~ig~v~Q~~~l~ 384 (601)
+++++ +++++-..-++.+++++... .|+++++ ++..|..++.|.+.... ..++++||+||++.+|
T Consensus 19 ~~~~l---~~vsl~i~~Gei~gllGpNG---aGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~ 92 (306)
T PRK13537 19 DKLVV---DGLSFHVQRGECFGLLGPNG---AGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLD 92 (306)
T ss_pred CeEEE---ecceEEEeCCcEEEEECCCC---CCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEEEeccCcCC
Confidence 44544 88999989999999997522 4555433 33445555555554322 2467899999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|++||+.|++.+++.+..+..+++.++++.++|.+..++++++||||||||++||+||+++|++|||||||+||||.
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~ 172 (306)
T PRK13537 93 PDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQ 172 (306)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHH
Confidence 99999999999888888766666678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEecCCCchhHHHHHh
Q psy7365 465 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCAEGRSADAQTYLS 544 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~~~~~~~~~~~l~ 544 (601)
+++.+|++|++++++|+|||++||++++++.+||||++|++|++++.|+++++.+.......+.+.... .......+.
T Consensus 173 ~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~ 250 (306)
T PRK13537 173 ARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIESEIGCDVIEIYGPD--PVALRDELA 250 (306)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhccCCCeEEEEEcCC--hHHHHHHhh
Confidence 999999999999878999999999999999999999999999999999999998764333333343221 111111111
Q ss_pred hcCCCceeEEeeCcEEEEEEcCCcccHHHHHHHHHHccccCCCeeEEEecCCCCCCC
Q psy7365 545 LNLPVADLVETHATQLQYRISGAVSDLGALFRTLESAKTEAGLIVDYSLSQTSLEDS 601 (601)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~i~~~~v~~~sLEdv 601 (601)
+.....+..+..+.+... ....+++.+.+.. . + .+...++||||+
T Consensus 251 ---~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~---~-~-~~~~~~~sLed~ 295 (306)
T PRK13537 251 ---PLAERTEISGETLFCYVR----DPEPLHARLKGRA---G-L-RYLHRPANLEDV 295 (306)
T ss_pred ---hccceeeeeCCEEEEEeC----CHHHHHHHHHhcc---C-c-eEEecCCCHHHH
Confidence 112122223344443322 2345556554321 2 3 344578999985
No 158
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-37 Score=313.76 Aligned_cols=213 Identities=25% Similarity=0.355 Sum_probs=179.1
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
++..++++++.|++ ...++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++..
T Consensus 6 ~~l~i~~l~~~~~~--~~~~~l~~isl~i~~Ge~~~I~G~nGs--GKSTL------l~~i~Gl~~~~~G~i~~~g~~~~~ 75 (269)
T PRK13648 6 SIIVFKNVSFQYQS--DASFTLKDVSFNIPKGQWTSIVGHNGS--GKSTI------AKLMIGIEKVKSGEIFYNNQAITD 75 (269)
T ss_pred ceEEEEEEEEEcCC--CCCcceeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEECCc
Confidence 34568999999864 224689999999988 999999 56665 579999999999999999998753
Q ss_pred -chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 122 -DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 122 -~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
+....++.+||+||+|. +|+..|+.+|+.|.....+.+.+....++.++++.+|+.+..++++.+||||||||+++||
T Consensus 76 ~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 76 DNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAG 155 (269)
T ss_pred CCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHH
Confidence 34456778999999985 7888999999998876666666666677889999999999999999999999999998654
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
||+ .+ |+
T Consensus 156 al~--------------------------------------~~-----------------------------------p~ 162 (269)
T PRK13648 156 VLA--------------------------------------LN-----------------------------------PS 162 (269)
T ss_pred HHH--------------------------------------cC-----------------------------------CC
Confidence 332 33 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++||||||+|||+.++..+++.|+++. +..|+|+|++||+++++.. |||+++|.+|+++..+++
T Consensus 163 lllLDEPt~~LD~~~~~~l~~~L~~~~----~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~ 226 (269)
T PRK13648 163 VIILDEATSMLDPDARQNLLDLVRKVK----SEHNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTP 226 (269)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCchHHhc-CCEEEEEECCEEEEecCH
Confidence 999999999999999999999999873 2248999999999999975 999999999999877653
No 159
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-37 Score=312.83 Aligned_cols=199 Identities=22% Similarity=0.296 Sum_probs=168.2
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
...++||++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~i~~l~~~~~~----~~il~~isl~i~~Ge~~~I~G~NGs--GKSTL------lk~l~Gl~~p~~G~i~~~g~~~~-- 77 (257)
T PRK11247 12 PLLLNAVSKRYGE----RTVLNQLDLHIPAGQFVAVVGRSGC--GKSTL------LRLLAGLETPSAGELLAGTAPLA-- 77 (257)
T ss_pred cEEEEEEEEEECC----cceeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCeEEEECCEEHH--
Confidence 3559999999864 3599999999988 999999 56665 57999999999999999987652
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
..++.+||+||++.+|+.+||.||+.++.. . ..+.++.++++.+|+.+..++++.+||||||||+++||+|
T Consensus 78 --~~~~~i~~v~q~~~l~~~~tv~enl~~~~~--~----~~~~~~~~~l~~~gl~~~~~~~~~~LSgGqkqrl~laraL- 148 (257)
T PRK11247 78 --EAREDTRLMFQDARLLPWKKVIDNVGLGLK--G----QWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARAL- 148 (257)
T ss_pred --HhhCceEEEecCccCCCCCcHHHHHHhccc--c----hHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHH-
Confidence 346789999999999999999999987531 1 1245678899999999999999999999999999865432
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
+.+ |+++|
T Consensus 149 -------------------------------------~~~-----------------------------------p~lll 156 (257)
T PRK11247 149 -------------------------------------IHR-----------------------------------PGLLL 156 (257)
T ss_pred -------------------------------------hcC-----------------------------------CCEEE
Confidence 222 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|||||+|||+.++..++++|+++. +..|+|||++||+++++..+||++++|.+|+++..+
T Consensus 157 LDEPt~~LD~~~~~~l~~~L~~~~----~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~ 216 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDLIESLW----QQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDL 216 (257)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999873 235899999999999999999999999999987644
No 160
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-37 Score=322.72 Aligned_cols=215 Identities=17% Similarity=0.192 Sum_probs=174.3
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC----CCeeEEEEcccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP----VSSGTAKIYDHD 118 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~----~~~G~v~~~g~~ 118 (601)
+..++||++.|+..++...+++|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++|.+
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGs--GKSTL------l~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGS--GKSLI------AKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCC--CHHHH------HHHHHccCCCCCCCcceEEEECCEE
Confidence 456899999996544556799999999988 999999 56655 569999997 589999999998
Q ss_pred CCC-chHH----hcccEEEEccCCC--CCCCCCHHHHHHHhHhhc---C---CChHHHHHHHHHHHHHcCCCc---ccCC
Q psy7365 119 IRT-DMTT----IRRSLGVCPQYNA--LFDKLTVEEHMWFYSQLK---Q---VPKDLAQLEISNMIGDLGIPH---KRTS 182 (601)
Q Consensus 119 ~~~-~~~~----~~~~ig~v~Q~~~--~~~~~tv~e~l~~~~~~~---~---~~~~~~~~~~~~~l~~~gl~~---~~~~ 182 (601)
+.. .... .++.++||||+|. +++.+||.+++.+....+ + ....+.+.++.++++.+||.+ ..++
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 854 2221 2357999999985 678899999998643321 1 112345667899999999985 3589
Q ss_pred ccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcch
Q psy7365 183 LANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTS 262 (601)
Q Consensus 183 ~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 262 (601)
++.+|||||||||+||+|| +.+
T Consensus 155 ~p~~LSgG~~QRv~iArAL--------------------------------------~~~-------------------- 176 (330)
T PRK15093 155 FPYELTEGECQKVMIAIAL--------------------------------------ANQ-------------------- 176 (330)
T ss_pred CchhCCHHHHHHHHHHHHH--------------------------------------HCC--------------------
Confidence 9999999999999854432 233
Q ss_pred hHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 263 ILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 263 ~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
|++|||||||++||+.++..++++|+++. +..|.|+|++|||++++..+|||+++|.+|++
T Consensus 177 ---------------P~llilDEPts~LD~~~~~~i~~lL~~l~----~~~g~tii~itHdl~~v~~~~dri~vm~~G~i 237 (330)
T PRK15093 177 ---------------PRLLIADEPTNAMEPTTQAQIFRLLTRLN----QNNNTTILLISHDLQMLSQWADKINVLYCGQT 237 (330)
T ss_pred ---------------CCEEEEeCCCCcCCHHHHHHHHHHHHHHH----HhcCCEEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 58999999999999999999999999984 23489999999999999999999999999999
Q ss_pred ccccCc
Q psy7365 343 QCCGSS 348 (601)
Q Consensus 343 v~~G~~ 348 (601)
+..|+.
T Consensus 238 ve~g~~ 243 (330)
T PRK15093 238 VETAPS 243 (330)
T ss_pred EEECCH
Confidence 988764
No 161
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-37 Score=308.77 Aligned_cols=208 Identities=24% Similarity=0.345 Sum_probs=172.3
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..+++|++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++...
T Consensus 5 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~p~~G~i~~~g~~~~~~ 72 (237)
T PRK11614 5 MLSFDKVSAHYGK----IQALHEVSLHINQGEIVTLIGANGA--GKTTL------LGTLCGDPRATSGRIVFDGKDITDW 72 (237)
T ss_pred EEEEEeEEEeeCC----ceeeeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHcCCCCCCCceEEECCEecCCC
Confidence 4568999999853 4599999999988 999999 56665 5799999999999999999987542
Q ss_pred -hH-HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHc-CCCcccCCccccCChHHHhhhhchh
Q psy7365 123 -MT-TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDL-GIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 123 -~~-~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
.. ..++.+||+||++.+|+.+||.||+.+..... ...+...++.++++.+ ++.+..++++.+||||||||+++||
T Consensus 73 ~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~ 150 (237)
T PRK11614 73 QTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA--ERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGR 150 (237)
T ss_pred CHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc--ChhHHHHHHHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHH
Confidence 22 34678999999999999999999998864322 2233445677888888 5887788899999999999997544
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
++ +.+ |+
T Consensus 151 al--------------------------------------~~~-----------------------------------p~ 157 (237)
T PRK11614 151 AL--------------------------------------MSQ-----------------------------------PR 157 (237)
T ss_pred HH--------------------------------------HhC-----------------------------------CC
Confidence 32 222 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++||||||+|||+.++..+++.|+++. .+|.|+|++||+++++.++|||+++|.+|+++..++.
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 221 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLR-----EQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTG 221 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCH
Confidence 999999999999999999999999873 3589999999999999999999999999999877654
No 162
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1e-36 Score=302.52 Aligned_cols=203 Identities=24% Similarity=0.396 Sum_probs=168.4
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+++|+++|+. .+.|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|+++... ..
T Consensus 3 ~~~l~~~~~~------~~~~~s~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~-~~ 67 (213)
T TIGR01277 3 LDKVRYEYEH------LPMEFDLNVADGEIVAIMGPSGA--GKSTL------LNLIAGFIEPASGSIKVNDQSHTGL-AP 67 (213)
T ss_pred EEeeeEEeCC------cceeeEEEEeCCcEEEEECCCCC--CHHHH------HHHHhcCCCCCCcEEEECCEEcccC-Ch
Confidence 7899999852 35799999988 999999 56665 5799999999999999999987542 23
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.+||+||++.+|+.+|+.||+.+........+...+.++.++++.+|+.+..++.+.+||||||||+++||+++
T Consensus 68 ~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~--- 144 (213)
T TIGR01277 68 YQRPVSMLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPEQLSGGQRQRVALARCLV--- 144 (213)
T ss_pred hccceEEEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcccCCHHHHHHHHHHHHHh---
Confidence 46789999999999999999999987543221122234567888999999998899999999999999997544322
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
. +|+++||||
T Consensus 145 -----------------------------------~-----------------------------------~p~llllDE 154 (213)
T TIGR01277 145 -----------------------------------R-----------------------------------PNPILLLDE 154 (213)
T ss_pred -----------------------------------c-----------------------------------CCCEEEEcC
Confidence 2 358999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
||+|||+.++..++++|.++. +..|.|+|++||+.+++..+||++++|.+|++...|
T Consensus 155 Pt~~LD~~~~~~~~~~l~~~~----~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~ 211 (213)
T TIGR01277 155 PFSALDPLLREEMLALVKQLC----SERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVS 211 (213)
T ss_pred CCccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEec
Confidence 999999999999999999873 224899999999999999999999999999987654
No 163
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=310.36 Aligned_cols=208 Identities=23% Similarity=0.332 Sum_probs=173.7
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~ 117 (601)
...++++++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|.++|.
T Consensus 12 ~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~Gl~~~~~~~~~~G~i~~~g~ 79 (258)
T PRK14268 12 QIKVENLNLWYGE----KQALKNVSMQIPKNSVTALIGPSGC--GKSTF------IRCLNRMNDLIKNCRIEGKVSIEGE 79 (258)
T ss_pred eEEEeeeEEEeCC----eeeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCcccCCCcceEEEECCE
Confidence 4568999999863 4599999999988 999999 56665 5799999985 8999999999
Q ss_pred cCCCc---hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 118 DIRTD---MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 118 ~~~~~---~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
++... ....++.+||+||++.+|+ +|++||+.|.....+.+......++.++++.+|+. +..++++.+||||
T Consensus 80 ~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG 158 (258)
T PRK14268 80 DIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGG 158 (258)
T ss_pred EcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHH
Confidence 87531 2345678999999998887 89999999876666665555566788999999984 4578899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+|+ .+
T Consensus 159 ~~qrv~laral~--------------------------------------~~---------------------------- 172 (258)
T PRK14268 159 QQQRLCIARTLA--------------------------------------VK---------------------------- 172 (258)
T ss_pred HHHHHHHHHHHH--------------------------------------cC----------------------------
Confidence 999998654332 22
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. +|+|||++||+++++..+||++++|.+|+++..+.+
T Consensus 173 -------p~llllDEPt~~LD~~~~~~l~~~l~~l~------~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 237 (258)
T PRK14268 173 -------PKIILFDEPTSALDPISTARIEDLIMNLK------KDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQT 237 (258)
T ss_pred -------CCEEEEeCCCcccCHHHHHHHHHHHHHHh------hCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 378999999999999999999999999999876653
No 164
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.1e-36 Score=312.33 Aligned_cols=214 Identities=21% Similarity=0.277 Sum_probs=175.6
Q ss_pred hhhcccccccccCC-----CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLG-----IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~ 118 (601)
..+++|++.|+..+ ...++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.+
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~ 74 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGC--GKSTL------ARLLLGLEKPAQGTVSFRGQD 74 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEE
Confidence 45889999985321 246799999999988 999999 56665 679999999999999999998
Q ss_pred CCCc-h---HHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCC-cccCCccccCChH
Q psy7365 119 IRTD-M---TTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~~-~---~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG 190 (601)
+... . ...++.+||+||++ .+++.+||.||+.+..... ++.....+.++.++++.+|+. ...++++.+||||
T Consensus 75 i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgG 154 (265)
T TIGR02769 75 LYQLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGG 154 (265)
T ss_pred ccccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHH
Confidence 7532 1 22467899999997 3677899999998765533 444445566788999999996 6789999999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||||+ ++
T Consensus 155 e~qrv~laral~--------------------------------------~~---------------------------- 168 (265)
T TIGR02769 155 QLQRINIARALA--------------------------------------VK---------------------------- 168 (265)
T ss_pred HHHHHHHHHHHh--------------------------------------cC----------------------------
Confidence 999998654332 33
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|||||||+|||+.++..+++.|+++. +..|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 169 -------p~illLDEPt~~LD~~~~~~l~~~l~~~~----~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 169 -------PKLIVLDEAVSNLDMVLQAVILELLRKLQ----QAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred -------CCEEEEeCCcccCCHHHHHHHHHHHHHHH----HhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 58999999999999999999999999873 22489999999999999999999999999999877654
No 165
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.8e-37 Score=292.86 Aligned_cols=204 Identities=23% Similarity=0.353 Sum_probs=169.0
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+.++++.|+... =..++.|.. +||||+ ||||| .++|+|+..|.+|+|.++|.+.+... .
T Consensus 4 L~~V~~~y~~~~------~~fdl~v~~ge~vAi~GpSGa--GKSTL------LnLIAGF~~P~~G~i~i~g~d~t~~~-P 68 (231)
T COG3840 4 LDDVRFSYGHLP------MRFDLTVPAGEIVAILGPSGA--GKSTL------LNLIAGFETPASGEILINGVDHTASP-P 68 (231)
T ss_pred ccceEEeeCcce------EEEEEeecCCcEEEEECCCCc--cHHHH------HHHHHhccCCCCceEEEcCeecCcCC-c
Confidence 567777776554 123344433 999999 57665 67999999999999999999986432 2
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhh-cCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQL-KQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..+.+.++||++.+|.++||.+|+.++..- ..+. .+.+++++.++..+||..+.+|.|.+|||||||||++||+++.+
T Consensus 69 ~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~LkL~-a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~ 147 (231)
T COG3840 69 AERPVSMLFQENNLFAHLTVAQNIGLGLSPGLKLN-AEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVRE 147 (231)
T ss_pred ccCChhhhhhccccchhhhhhhhhcccCCcccccC-HHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhcc
Confidence 356899999999999999999999987643 2233 45577899999999999999999999999999999876644333
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
-++++||
T Consensus 148 -------------------------------------------------------------------------~PilLLD 154 (231)
T COG3840 148 -------------------------------------------------------------------------QPILLLD 154 (231)
T ss_pred -------------------------------------------------------------------------CCeEEec
Confidence 1499999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||+|+|||.-|.++..++.++. .+++.|++++||..+.+.+++||++++++|+|.+.|..
T Consensus 155 EPFsALdP~LR~eMl~Lv~~l~----~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~ 214 (231)
T COG3840 155 EPFSALDPALRAEMLALVSQLC----DERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGST 214 (231)
T ss_pred CchhhcCHHHHHHHHHHHHHHH----HhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccH
Confidence 9999999999999999999984 45789999999999999999999999999999988754
No 166
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.2e-36 Score=309.41 Aligned_cols=208 Identities=21% Similarity=0.325 Sum_probs=174.6
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 2 ~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~i~~~~~ 69 (252)
T TIGR03005 2 RFSDVTKRFGI----LTVLDGLNFSVAAGEKVALIGPSGS--GKSTI------LRILMTLEPIDEGQIQVEGEQLYHMPG 69 (252)
T ss_pred EEEEEEEEeCC----eeEEeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEcccccc
Confidence 37899999863 3599999999988 999999 56665 5799999999999999999987421
Q ss_pred ------------hHHhcccEEEEccCCCCCCCCCHHHHHHHhHh-hcCCChHHHHHHHHHHHHHcCCCcccCCccccCCh
Q psy7365 123 ------------MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ-LKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSG 189 (601)
Q Consensus 123 ------------~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSg 189 (601)
....++.++|+||++.+|+..|+.||+.++.. ..+.+......++.++++.+|+.+..++.+.+|||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~ 149 (252)
T TIGR03005 70 RNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSG 149 (252)
T ss_pred ccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCH
Confidence 12456789999999999999999999987542 33455555667788999999999999999999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
||+||+++||+| +.+
T Consensus 150 G~~qrv~laral--------------------------------------~~~--------------------------- 164 (252)
T TIGR03005 150 GQQQRVAIARAL--------------------------------------AMR--------------------------- 164 (252)
T ss_pred HHHHHHHHHHHH--------------------------------------HcC---------------------------
Confidence 999999754432 232
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.++..++++|+++. +..|.|+|++||+++++..+||++++|.+|+++..++
T Consensus 165 --------p~llllDEP~~~LD~~~~~~l~~~l~~~~----~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 165 --------PKVMLFDEVTSALDPELVGEVLNVIRRLA----SEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred --------CCEEEEeCCcccCCHHHHHHHHHHHHHHH----HhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 58999999999999999999999999873 2248999999999999999999999999999887664
No 167
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.1e-36 Score=312.93 Aligned_cols=214 Identities=19% Similarity=0.269 Sum_probs=175.0
Q ss_pred hhhhcccccccccCC-----CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLG-----IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~ 117 (601)
+..++||++.|++.. ++.++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~ 75 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGS--GKSTL------AKMLAGMIEPTSGELLIDDH 75 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCC--CHHHH------HHHHhCCCCCCCCEEEECCE
Confidence 355899999996432 235799999999988 999999 56665 67999999999999999999
Q ss_pred cCCCc-hHHhcccEEEEccCCC--CCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHH
Q psy7365 118 DIRTD-MTTIRRSLGVCPQYNA--LFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQ 192 (601)
Q Consensus 118 ~~~~~-~~~~~~~ig~v~Q~~~--~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~ 192 (601)
++... ....++.+||+||++. +++.+|+.+++.+..... +....+..+++.++++.+|+. ...++++.+||||||
T Consensus 76 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~ 155 (267)
T PRK15112 76 PLHFGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQK 155 (267)
T ss_pred ECCCCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHH
Confidence 88532 2334567999999985 677889999998865532 444455566788999999994 677889999999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++|++| +.+
T Consensus 156 qrv~laral--------------------------------------~~~------------------------------ 167 (267)
T PRK15112 156 QRLGLARAL--------------------------------------ILR------------------------------ 167 (267)
T ss_pred HHHHHHHHH--------------------------------------HhC------------------------------
Confidence 999864432 222
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.++..++++|.++. +..|.|||++||+++++..+||++++|.+|+++..++
T Consensus 168 -----p~lllLDEPt~~LD~~~~~~l~~~l~~~~----~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 233 (267)
T PRK15112 168 -----PKVIIADEALASLDMSMRSQLINLMLELQ----EKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGS 233 (267)
T ss_pred -----CCEEEEcCCcccCCHHHHHHHHHHHHHHH----HHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 58999999999999999999999999873 2248999999999999999999999999999876654
No 168
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=332.26 Aligned_cols=218 Identities=22% Similarity=0.330 Sum_probs=184.9
Q ss_pred cchhhhhcccccccccC-------CCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEE
Q psy7365 46 GAYVSLFESLSENRDKL-------GIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTA 112 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v 112 (601)
+.++..++||+|.|... .....|++||||++.+ .|+||| ||||| + |+|+|+++|++|+|
T Consensus 277 ~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGs--GKSTl-----a-r~i~gL~~P~~G~i 348 (539)
T COG1123 277 AEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGS--GKSTL-----A-RILAGLLPPSSGSI 348 (539)
T ss_pred cCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCC--CHHHH-----H-HHHhCCCCCCCceE
Confidence 56677799999999742 2357899999999988 999999 56554 4 69999999999999
Q ss_pred EEccccCC--C-chHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCCc-ccCCccc
Q psy7365 113 KIYDHDIR--T-DMTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIPH-KRTSLAN 185 (601)
Q Consensus 113 ~~~g~~~~--~-~~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~~-~~~~~~~ 185 (601)
.++|.++. . .....|+++-++||+| .+.|.+||.+++...+..++. ...+.++++.++++.+||+. ..+++|+
T Consensus 349 ~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~ 428 (539)
T COG1123 349 IFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPH 428 (539)
T ss_pred EEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCch
Confidence 99998832 1 2344677899999998 599999999999988876653 34566678999999999997 6999999
Q ss_pred cCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHH
Q psy7365 186 TLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILV 265 (601)
Q Consensus 186 ~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 265 (601)
+||||||||++||||| +.
T Consensus 429 elSGGQrQRvaIARAL--------------------------------------a~------------------------ 446 (539)
T COG1123 429 ELSGGQRQRVAIARAL--------------------------------------AL------------------------ 446 (539)
T ss_pred hcCcchhHHHHHHHHH--------------------------------------hc------------------------
Confidence 9999999999865432 22
Q ss_pred HHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 266 AVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 266 a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
.|+++|+|||||.||+..+..+.++|++++ ++.|.|.||+|||+.++..+||||++|.+|+|+..
T Consensus 447 -----------~P~lli~DEp~SaLDvsvqa~VlnLl~~lq----~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~ 511 (539)
T COG1123 447 -----------EPKLLILDEPVSALDVSVQAQVLNLLKDLQ----EELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEE 511 (539)
T ss_pred -----------CCCEEEecCCccccCHHHHHHHHHHHHHHH----HHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEe
Confidence 269999999999999999999999999995 34699999999999999999999999999999998
Q ss_pred cCc
Q psy7365 346 GSS 348 (601)
Q Consensus 346 G~~ 348 (601)
|..
T Consensus 512 G~~ 514 (539)
T COG1123 512 GPT 514 (539)
T ss_pred CCH
Confidence 854
No 169
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=9.5e-37 Score=325.41 Aligned_cols=202 Identities=20% Similarity=0.353 Sum_probs=168.8
Q ss_pred ccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-----
Q psy7365 54 SLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD----- 122 (601)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~----- 122 (601)
+|+|.|++. .+ |+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 4 ~l~~~~~~~-----~~-~isl~i~~Gei~~l~G~nGs--GKSTL------l~~iaGl~~p~~G~I~~~g~~i~~~~~~~~ 69 (354)
T TIGR02142 4 RFSKRLGDF-----SL-DADFTLPGQGVTAIFGRSGS--GKTTL------IRLIAGLTRPDEGEIVLNGRTLFDSRKGIF 69 (354)
T ss_pred EEEEEECCE-----EE-EEEEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEECccCccccc
Confidence 688888642 24 89999987 999999 56665 5799999999999999999987532
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
....++.+||+||++.+|+++||.||+.|+.... +..+.+.++.++++.+||.+..++++.+||||||||+++||||
T Consensus 70 ~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~--~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL- 146 (354)
T TIGR02142 70 LPPEKRRIGYVFQEARLFPHLSVRGNLRYGMKRA--RPSERRISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRAL- 146 (354)
T ss_pred cchhhCCeEEEecCCccCCCCcHHHHHHHHhhcc--ChhHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHH-
Confidence 1234678999999999999999999999876532 2334456788999999999999999999999999999865432
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
+.+ |+++|
T Consensus 147 -------------------------------------~~~-----------------------------------p~lll 154 (354)
T TIGR02142 147 -------------------------------------LSS-----------------------------------PRLLL 154 (354)
T ss_pred -------------------------------------HcC-----------------------------------CCEEE
Confidence 233 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||||+|||+.++..+++.|+++. +..|+|+|++||+++++..+||++++|.+|++...+++
T Consensus 155 LDEPts~LD~~~~~~l~~~L~~l~----~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 216 (354)
T TIGR02142 155 MDEPLAALDDPRKYEILPYLERLH----AEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPI 216 (354)
T ss_pred EcCCCcCCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCH
Confidence 999999999999999999999873 23489999999999999999999999999999877654
No 170
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=315.35 Aligned_cols=214 Identities=22% Similarity=0.355 Sum_probs=174.7
Q ss_pred hhhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 50 SLFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
..++||++.|++.. ....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 7 l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~~~ 78 (289)
T PRK13645 7 IILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGS--GKSTM------IQLTNGLIISETGQTIVGDYAIPAN 78 (289)
T ss_pred EEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCEEcccc
Confidence 34899999986422 124599999999988 999999 56665 679999999999999999998742
Q ss_pred -----chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhh
Q psy7365 122 -----DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRK 194 (601)
Q Consensus 122 -----~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr 194 (601)
+....++.+||+||++. .++..|+.||+.|+....+...++...++.++++.++|. +..++++.+||||||||
T Consensus 79 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 79 LKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRR 158 (289)
T ss_pred ccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHH
Confidence 23445678999999984 233469999999876555555555667788999999995 67899999999999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
+++||||+ .+
T Consensus 159 v~laral~--------------------------------------~~-------------------------------- 168 (289)
T PRK13645 159 VALAGIIA--------------------------------------MD-------------------------------- 168 (289)
T ss_pred HHHHHHHH--------------------------------------hC--------------------------------
Confidence 98654332 22
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|||||||+|||+.++..++++|+++. +..|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 169 ---p~lLlLDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (289)
T PRK13645 169 ---GNTLVLDEPTGGLDPKGEEDFINLFERLN----KEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSP 235 (289)
T ss_pred ---CCEEEEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999873 22489999999999999999999999999998876643
No 171
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=308.91 Aligned_cols=209 Identities=24% Similarity=0.355 Sum_probs=172.8
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~ 117 (601)
+..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++| ++|+|+++|.
T Consensus 4 ~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~~~~~~~G~i~~~g~ 71 (253)
T PRK14267 4 AIETVNLRVYYGS----NHVIKGVDLKIPQNGVFALMGPSGC--GKSTL------LRTFNRLLELNEEARVEGEVRLFGR 71 (253)
T ss_pred eEEEEeEEEEeCC----eeeeecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhccCCcccCCCCceEEEECCE
Confidence 3458999999864 3599999999988 999999 56665 5799999987 4999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC--ChHHHHHHHHHHHHHcCCC----cccCCccccCC
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV--PKDLAQLEISNMIGDLGIP----HKRTSLANTLS 188 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LS 188 (601)
++.. .....++.+||+||++.+|+.+||.||+.++....+. +.+....++.++++.+|+. ...++++.+||
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS 151 (253)
T PRK14267 72 NIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLS 151 (253)
T ss_pred EccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCC
Confidence 8852 2334567899999999999999999999987654332 3445556788999999984 35788999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+++||++ +.
T Consensus 152 ~G~~qrv~laral--------------------------------------~~--------------------------- 166 (253)
T PRK14267 152 GGQRQRLVIARAL--------------------------------------AM--------------------------- 166 (253)
T ss_pred HHHHHHHHHHHHH--------------------------------------hc---------------------------
Confidence 9999999854432 22
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+|+++||||||+|||+.++..+++.|+++. +++|+|++||+++++..+||++++|.+|+++..+++
T Consensus 167 --------~p~llllDEP~~~LD~~~~~~l~~~l~~~~------~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (253)
T PRK14267 167 --------KPKILLMDEPTANIDPVGTAKIEELLFELK------KEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPT 232 (253)
T ss_pred --------CCCEEEEcCCCccCCHHHHHHHHHHHHHHh------hCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 258999999999999999999999999872 258999999999999999999999999999876653
No 172
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.9e-36 Score=303.19 Aligned_cols=210 Identities=23% Similarity=0.335 Sum_probs=173.0
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC---CCeeEEEEcccc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP---VSSGTAKIYDHD 118 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~---~~~G~v~~~g~~ 118 (601)
|+..++++++.|.+.++..++++|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++|.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGs--GKSTL------lk~l~G~~~~~~~~~G~i~~~g~~ 73 (226)
T cd03234 2 RVLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGS--GKTTL------LDAISGRVEGGGTTSGQILFNGQP 73 (226)
T ss_pred ccceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCC--CHHHH------HHHHhCccCCCCCCceEEEECCEE
Confidence 3445889999986555567899999999988 999999 56665 579999999 999999999998
Q ss_pred CCCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC---ChHHHHHHHHH-HHHHcCCCcccCCccccCChHHHhh
Q psy7365 119 IRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV---PKDLAQLEISN-MIGDLGIPHKRTSLANTLSGGMQRK 194 (601)
Q Consensus 119 ~~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~---~~~~~~~~~~~-~l~~~gl~~~~~~~~~~LSgG~~qr 194 (601)
+.. ...++.+||+||++.+|+.+||.||+.|+....+. .......++.+ .++.+++++..++.+.+|||||+||
T Consensus 74 ~~~--~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr 151 (226)
T cd03234 74 RKP--DQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRR 151 (226)
T ss_pred CCh--HHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHH
Confidence 742 34577899999999999999999999987654321 22222334555 8999999998999999999999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
+++||+|+ .
T Consensus 152 l~laral~--------------------------------------~--------------------------------- 160 (226)
T cd03234 152 VSIAVQLL--------------------------------------W--------------------------------- 160 (226)
T ss_pred HHHHHHHH--------------------------------------h---------------------------------
Confidence 98654322 2
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecch-hHHHhcCCEEEEecCCccccc
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYM-DEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl-~~~~~l~Drv~vL~~GkIv~~ 345 (601)
+|+++||||||+|||+.++..++++|+++. ..|.|+|++||++ +++..+||++++|.+|+++..
T Consensus 161 --~p~illlDEP~~gLD~~~~~~~~~~l~~~~-----~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~ 225 (226)
T cd03234 161 --DPKVLILDEPTSGLDSFTALNLVSTLSQLA-----RRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYS 225 (226)
T ss_pred --CCCEEEEeCCCcCCCHHHHHHHHHHHHHHH-----HCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEec
Confidence 258999999999999999999999999873 3488999999999 589999999999999998754
No 173
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=308.76 Aligned_cols=208 Identities=24% Similarity=0.337 Sum_probs=172.3
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~ 117 (601)
+..++++++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.
T Consensus 7 ~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~i~~~g~ 74 (254)
T PRK14273 7 IIETENLNLFYTD----FKALNNINIKILKNSITALIGPSGC--GKSTF------LRTLNRMNDLVEGIKIEGNVIYEGK 74 (254)
T ss_pred eEEEeeeEEEeCC----ceeecceeeEEcCCCEEEEECCCCC--CHHHH------HHHHhccccCCcCCCCceEEEECCE
Confidence 4569999999864 3489999999988 999999 56665 5799999997 5999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCC----CcccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGI----PHKRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl----~~~~~~~~~~LSg 189 (601)
++.. .....++.+||+||++.+|+ +||+||+.|+....+. .....+.++.++++.+|+ .+..++++.+|||
T Consensus 75 ~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSg 153 (254)
T PRK14273 75 NIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSG 153 (254)
T ss_pred ecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCH
Confidence 8742 23345778999999998884 9999999987655443 334456778899999997 4557889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+| +.+
T Consensus 154 G~~qrv~laral--------------------------------------~~~--------------------------- 168 (254)
T PRK14273 154 GQQQRLCIARTL--------------------------------------AIE--------------------------- 168 (254)
T ss_pred HHHHHHHHHHHH--------------------------------------HcC---------------------------
Confidence 999999865432 222
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. ++.|+|++||+++++..+|||+++|.+|+++..+..
T Consensus 169 --------p~lllLDEPt~~LD~~~~~~l~~~l~~~~------~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 233 (254)
T PRK14273 169 --------PNVILMDEPTSALDPISTGKIEELIINLK------ESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESST 233 (254)
T ss_pred --------CCEEEEeCCCcccCHHHHHHHHHHHHHHh------cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 368999999999999999999999999999877653
No 174
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=312.05 Aligned_cols=212 Identities=20% Similarity=0.212 Sum_probs=174.8
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
++..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 10 ~~l~i~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~ 77 (265)
T PRK10575 10 TTFALRNVSFRVPG----RTLLHPLSLTFPAGKVTGLIGHNGS--GKSTL------LKMLGRHQPPSEGEILLDAQPLES 77 (265)
T ss_pred ceEEEeeEEEEECC----EEEEeeeeeEEcCCCEEEEECCCCC--CHHHH------HHHHcCCCCCCCCEEEECCEehhh
Confidence 34569999999853 3599999999988 999999 56655 579999999999999999998743
Q ss_pred -chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc----CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhh
Q psy7365 122 -DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK----QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 122 -~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
.....++.++|+||++.+++.+|+.||+.++.... +..+.....++.++++.+|+.+..++++.+||||||||++
T Consensus 78 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ 157 (265)
T PRK10575 78 WSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAW 157 (265)
T ss_pred CCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHH
Confidence 33445678999999998889999999998753211 1122334567889999999998899999999999999997
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+||+| +.+
T Consensus 158 laral--------------------------------------~~~---------------------------------- 165 (265)
T PRK10575 158 IAMLV--------------------------------------AQD---------------------------------- 165 (265)
T ss_pred HHHHH--------------------------------------hcC----------------------------------
Confidence 54432 222
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.+++.++++|.++. +..|.|||++||+++++..+||++++|.+|+++..++.
T Consensus 166 -p~lllLDEPt~~LD~~~~~~~~~~l~~l~----~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~ 232 (265)
T PRK10575 166 -SRCLLLDEPTSALDIAHQVDVLALVHRLS----QERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTP 232 (265)
T ss_pred -CCEEEEcCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 58999999999999999999999999873 22489999999999999999999999999999876643
No 175
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.2e-36 Score=314.59 Aligned_cols=206 Identities=34% Similarity=0.564 Sum_probs=179.3
Q ss_pred cEEEEEecchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCC--cccccccccCCCCcccCC
Q psy7365 315 RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKS--APQKSYIGYCPQFDALND 385 (601)
Q Consensus 315 ~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~--~~~~~~ig~v~Q~~~l~~ 385 (601)
++++ .++++...-++.+++++... .|+++++ +++.|+..+.|.+... ...++++||+||++.+|+
T Consensus 18 ~~~l---~~vs~~i~~Gei~gllG~NG---AGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~ 91 (293)
T COG1131 18 KTAL---DGVSFEVEPGEIFGLLGPNG---AGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYP 91 (293)
T ss_pred CEEE---eceeEEEcCCeEEEEECCCC---CCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEEccCCCCCc
Confidence 5666 88999999999999997522 4555443 3445666666666544 345788999999999999
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHH
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGA 465 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~ 465 (601)
.+||+|++.|++.+++.+....+++++++++.++|.+..++++++||+||||||+||+||+++|+++||||||+||||.+
T Consensus 92 ~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~ 171 (293)
T COG1131 92 ELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPES 171 (293)
T ss_pred cccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcchhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHH
Confidence 99999999999999987755566789999999999987788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCC-cEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceE
Q psy7365 466 RRFLWTCIERAVSEG-RCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYS 526 (601)
Q Consensus 466 ~~~i~~lL~~l~~~G-~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~ 526 (601)
+.+++++|++++++| +||++|||.+++++.+||||++|++|++++.|+++++...+.....
T Consensus 172 ~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~~~~~~~ 233 (293)
T COG1131 172 RREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEKFGGKGV 233 (293)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHhhccCce
Confidence 999999999999887 8999999999999999999999999999999999999888765433
No 176
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=313.17 Aligned_cols=211 Identities=28% Similarity=0.406 Sum_probs=176.0
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+..++++++.|+. ...++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++..
T Consensus 7 ~l~~~nl~~~~~~--~~~~il~~isl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~p~~G~I~~~g~~i~~~ 76 (271)
T PRK13632 7 MIKVENVSFSYPN--SENNALKNVSFEINEGEYVAILGHNGS--GKSTI------SKILTGLLKPQSGEIKIDGITISKE 76 (271)
T ss_pred EEEEEeEEEEcCC--CCccceeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCEecCcC
Confidence 3558999999852 234689999999988 999999 56665 579999999999999999998854
Q ss_pred chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 122 DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
+....++.+||+||++. .|+.+|+.||+.++....+.+.++.+.++.++++.+||.+..++++.+||||||||+++|||
T Consensus 77 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~lara 156 (271)
T PRK13632 77 NLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASV 156 (271)
T ss_pred CHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHH
Confidence 33456778999999985 67789999999987665556656666778999999999999999999999999999975443
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 157 l--------------------------------------~~~-----------------------------------p~l 163 (271)
T PRK13632 157 L--------------------------------------ALN-----------------------------------PEI 163 (271)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 2 222 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+||||||+|||+.+++.++++|+++. +..++|+|++||+++++. .||++++|.+|++...++
T Consensus 164 llLDEP~~gLD~~~~~~l~~~l~~~~----~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~ 225 (271)
T PRK13632 164 IIFDESTSMLDPKGKREIKKIMVDLR----KTRKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGK 225 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHH----HhcCcEEEEEEechhHHh-hCCEEEEEECCEEEEecC
Confidence 99999999999999999999999873 223589999999999986 799999999999876654
No 177
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-36 Score=308.08 Aligned_cols=209 Identities=25% Similarity=0.303 Sum_probs=171.9
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEcc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYD 116 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g 116 (601)
++..+++|++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 5 PKMEARGLSFFYGD----FQALHDISLEFEQNQVTALIGPSGC--GKSTF------LRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred cEEEEeeeEEEECC----eeeecceeEEEeCCCEEEEECCCCC--CHHHH------HHHHHhhcccCCCCCCceEEEECC
Confidence 44569999999863 3599999999988 999999 56665 579999974 6899999999
Q ss_pred ccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCCc----ccCCccccCC
Q psy7365 117 HDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIPH----KRTSLANTLS 188 (601)
Q Consensus 117 ~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~~----~~~~~~~~LS 188 (601)
+++.. .....++.+||+||++.+|+ .||.||+.|+....+. +.....+++.++++.+|+.+ ..++++.+||
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS 151 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLS 151 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCC
Confidence 98753 22345678999999998887 5999999987665554 23345667889999999853 4688899999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+++||++ +.+
T Consensus 152 gGq~qrv~laral--------------------------------------~~~-------------------------- 167 (253)
T PRK14242 152 GGQQQRLCIARAL--------------------------------------AVE-------------------------- 167 (253)
T ss_pred HHHHHHHHHHHHH--------------------------------------hcC--------------------------
Confidence 9999999754432 222
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|+++. +|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 168 ---------p~llllDEPt~~LD~~~~~~l~~~l~~~~------~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~ 232 (253)
T PRK14242 168 ---------PEVLLMDEPASALDPIATQKIEELIHELK------ARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPT 232 (253)
T ss_pred ---------CCEEEEeCCcccCCHHHHHHHHHHHHHHh------cCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 368999999999999999999999999998876643
No 178
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.1e-36 Score=305.42 Aligned_cols=208 Identities=19% Similarity=0.230 Sum_probs=169.7
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCC--CCCeeEEEEccccCCCc
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGML--PVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~--~~~~G~v~~~g~~~~~~ 122 (601)
.+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|++ +|++|+|.++|.++...
T Consensus 2 ~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~G~i~~~g~~~~~~ 69 (243)
T TIGR01978 2 KIKDLHVSVED----KEILKGVNLTVKKGEIHAIMGPNGS--GKSTL------SKTIAGHPSYEVTSGTILFKGQDLLEL 69 (243)
T ss_pred eEeeEEEEECC----EEEEeccceEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCcceEEECCEecCCC
Confidence 37899999863 4599999999988 999999 57665 67999995 79999999999987542
Q ss_pred -hHH-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcC-------CChHHHHHHHHHHHHHcCCC-cccCCccc-cCChHH
Q psy7365 123 -MTT-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQ-------VPKDLAQLEISNMIGDLGIP-HKRTSLAN-TLSGGM 191 (601)
Q Consensus 123 -~~~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~-------~~~~~~~~~~~~~l~~~gl~-~~~~~~~~-~LSgG~ 191 (601)
... .+..++|+||++.+|+.+|+.||+.+...... .+..+..+++.++++.+|+. ...++.+. +|||||
T Consensus 70 ~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~ 149 (243)
T TIGR01978 70 EPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGE 149 (243)
T ss_pred CHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHH
Confidence 222 34569999999999999999999988654321 12334456788999999997 46788887 599999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+|+ .+
T Consensus 150 ~qrl~la~al~--------------------------------------~~----------------------------- 162 (243)
T TIGR01978 150 KKRNEILQMAL--------------------------------------LE----------------------------- 162 (243)
T ss_pred HHHHHHHHHHh--------------------------------------cC-----------------------------
Confidence 99998654332 22
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhc-CCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLL-GDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l-~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. .+|+|||++||+++++... ||++++|.+|++...++.
T Consensus 163 ------p~llllDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (243)
T TIGR01978 163 ------PKLAILDEIDSGLDIDALKIVAEGINRLR-----EPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDV 229 (243)
T ss_pred ------CCEEEecCCcccCCHHHHHHHHHHHHHHH-----HCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCH
Confidence 58999999999999999999999999872 3589999999999999998 899999999998876644
No 179
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=312.88 Aligned_cols=212 Identities=24% Similarity=0.311 Sum_probs=178.2
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..+++|++.|++. ...++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. .
T Consensus 5 l~~~~l~~~~~~~-~~~~~l~~v~l~i~~Ge~~~I~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~i~~~~ 75 (277)
T PRK13642 5 LEVENLVFKYEKE-SDVNQLNGVSFSITKGEWVSIIGQNGS--GKSTT------ARLIDGLFEEFEGKVKIDGELLTAEN 75 (277)
T ss_pred EEEEEEEEEcCCC-CcCeeeeeeEEEEcCCCEEEEECCCCC--cHHHH------HHHHhcCCCCCCCEEEECCEECCcCC
Confidence 4589999998632 224589999999988 999999 56665 579999999999999999998854 2
Q ss_pred hHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 123 MTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
....++.+||+||++. +++..||.||+.++....+.++.+..+++.++++.+||.+..++++.+||||||||+++||||
T Consensus 76 ~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL 155 (277)
T PRK13642 76 VWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGII 155 (277)
T ss_pred HHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 3456778999999985 677899999999876655666666667889999999999999999999999999999865543
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+ .+ |+++
T Consensus 156 ~--------------------------------------~~-----------------------------------p~ll 162 (277)
T PRK13642 156 A--------------------------------------LR-----------------------------------PEII 162 (277)
T ss_pred H--------------------------------------cC-----------------------------------CCEE
Confidence 2 22 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||||||+|||+.++..++++|.++. +..|.|||++||+++++. .||++++|.+|+++..+..
T Consensus 163 llDEPt~~LD~~~~~~l~~~l~~l~----~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~ 224 (277)
T PRK13642 163 ILDESTSMLDPTGRQEIMRVIHEIK----EKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAP 224 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999873 224899999999999987 6999999999999877653
No 180
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2e-36 Score=298.23 Aligned_cols=195 Identities=24% Similarity=0.341 Sum_probs=163.8
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC--c-
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT--D- 122 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~--~- 122 (601)
++||++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. .
T Consensus 1 i~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 68 (206)
T TIGR03608 1 LKNISKKFGD----KIILDDLNLTIEKGKMYAIIGESGS--GKSTL------LNIIGLLEKFDSGQVYLNGKETPPLNSK 68 (206)
T ss_pred CcceEEEECC----EEEEeceEEEEeCCcEEEEECCCCC--CHHHH------HHHHhcCCCCCCeEEEECCEEccccchh
Confidence 4688898853 4599999999988 999999 56665 679999999999999999998642 1
Q ss_pred --hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 --MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 --~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
....++.+||+||++.+|+.+|+.||+.|.....+.++.+..+++.++++.+|+.+..++++.+|||||+||+++||+
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~lara 148 (206)
T TIGR03608 69 KASKFRREKLGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARA 148 (206)
T ss_pred hHHHHHHhCeeEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHH
Confidence 123567899999999999999999999987665566556666788999999999999999999999999999975443
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 149 l--------------------------------------~~~-----------------------------------p~l 155 (206)
T TIGR03608 149 I--------------------------------------LKD-----------------------------------PPL 155 (206)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 2 233 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEe
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAII 337 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL 337 (601)
+||||||+|||+.++..+++.|+++. .+|.|+|++||++++. ..||++++|
T Consensus 156 lllDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 156 ILADEPTGSLDPKNRDEVLDLLLELN-----DEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred EEEeCCcCCCCHHHHHHHHHHHHHHH-----hcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 99999999999999999999999872 3489999999999876 589999875
No 181
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=310.21 Aligned_cols=208 Identities=24% Similarity=0.304 Sum_probs=173.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..++++++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +
T Consensus 3 l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~ 70 (255)
T PRK11231 3 LRTENLTVGYGT----KRILNDLSLSLPTGKITALIGPNGC--GKSTL------LKCFARLLTPQSGTVFLGDKPISMLS 70 (255)
T ss_pred EEEEeEEEEECC----EEEEeeeeeEEcCCcEEEEECCCCC--CHHHH------HHHHhCCcCCCCcEEEECCEEhHHCC
Confidence 348999999863 4699999999988 999999 56665 679999999999999999998743 2
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHh----hcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhch
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ----LKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNV 198 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~----~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~ 198 (601)
....++.+||+||++.+++.+|+.||+.|+.. .++..+.....++.++++.+|+.+..++++.+|||||+||+++|
T Consensus 71 ~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la 150 (255)
T PRK11231 71 SRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLA 150 (255)
T ss_pred HHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHH
Confidence 33456679999999998889999999988531 12322334456788999999999889999999999999999865
Q ss_pred hhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCC
Q psy7365 199 KVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPA 278 (601)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 278 (601)
||| +.+ |
T Consensus 151 ral--------------------------------------~~~-----------------------------------p 157 (255)
T PRK11231 151 MVL--------------------------------------AQD-----------------------------------T 157 (255)
T ss_pred HHH--------------------------------------hcC-----------------------------------C
Confidence 432 233 5
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 279 STVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 279 ~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+++||||||+|||+.++..+++.|+++. .+|+|+|++||+++++.++||++++|.+|++...+.
T Consensus 158 ~llllDEP~~~LD~~~~~~l~~~l~~l~-----~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 221 (255)
T PRK11231 158 PVVLLDEPTTYLDINHQVELMRLMRELN-----TQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGT 221 (255)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcC
Confidence 8999999999999999999999999873 348999999999999999999999999999876654
No 182
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=313.74 Aligned_cols=212 Identities=25% Similarity=0.356 Sum_probs=178.7
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCe---eEEEEccccC
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSS---GTAKIYDHDI 119 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~---G~v~~~g~~~ 119 (601)
+..+++|++.|+.. ..++++|+||++.+ +||||| ||||| .++|+|+++|++ |+|.++|.++
T Consensus 5 ~l~i~~l~~~~~~~--~~~~l~~v~l~i~~Ge~~~I~G~nGa--GKSTL------l~~l~G~~~p~~g~~G~i~i~g~~~ 74 (282)
T PRK13640 5 IVEFKHVSFTYPDS--KKPALNDISFSIPRGSWTALIGHNGS--GKSTI------SKLINGLLLPDDNPNSKITVDGITL 74 (282)
T ss_pred eEEEEEEEEEcCCC--CccceeeEEEEEcCCCEEEEECCCCC--cHHHH------HHHHhcccCCCCCCCcEEEECCEEC
Confidence 34589999998532 24599999999988 999999 56665 579999999987 9999999988
Q ss_pred CC-chHHhcccEEEEccCCC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 120 RT-DMTTIRRSLGVCPQYNA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 120 ~~-~~~~~~~~ig~v~Q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
.. .....++.+||+||++. +|+..||.||+.|.....+.++++.++++.++++.+||.+..++++.+|||||+||+++
T Consensus 75 ~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~l 154 (282)
T PRK13640 75 TAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAI 154 (282)
T ss_pred CcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHH
Confidence 54 23445678999999985 77789999999987666677777777889999999999999999999999999999975
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
|+|| +.+
T Consensus 155 aral--------------------------------------~~~----------------------------------- 161 (282)
T PRK13640 155 AGIL--------------------------------------AVE----------------------------------- 161 (282)
T ss_pred HHHH--------------------------------------HcC-----------------------------------
Confidence 4432 232
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|+++. +..|+|||++||+++++. .||++++|.+|+++..+++
T Consensus 162 P~llllDEPt~gLD~~~~~~l~~~l~~l~----~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~~g~~ 227 (282)
T PRK13640 162 PKIIILDESTSMLDPAGKEQILKLIRKLK----KKNNLTVISITHDIDEAN-MADQVLVLDDGKLLAQGSP 227 (282)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999873 224899999999999985 7999999999999887754
No 183
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.3e-36 Score=308.25 Aligned_cols=208 Identities=20% Similarity=0.286 Sum_probs=173.2
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.++++++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +.
T Consensus 3 ~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~~ 70 (256)
T TIGR03873 3 RLSRVSWSAGG----RLIVDGVDVTAPPGSLTGLLGPNGS--GKSTL------LRLLAGALRPDAGTVDLAGVDLHGLSR 70 (256)
T ss_pred eEEeEEEEECC----EEEEeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHcCCCCCCCCEEEECCEEcccCCH
Confidence 37899999854 4599999999988 999999 56665 679999999999999999998754 33
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHh----hcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ----LKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~----~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
...++.++|+||++.+++.+||.||+.++.. ..+.+..+..+++.++++.+|+.+..++++.+||||||||+++|+
T Consensus 71 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~ 150 (256)
T TIGR03873 71 RARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMSTLSGGERQRVHVAR 150 (256)
T ss_pred HHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHH
Confidence 4456679999999988888999999988532 122233344457889999999999899999999999999997544
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
+| +.+ |+
T Consensus 151 al--------------------------------------~~~-----------------------------------p~ 157 (256)
T TIGR03873 151 AL--------------------------------------AQE-----------------------------------PK 157 (256)
T ss_pred HH--------------------------------------hcC-----------------------------------CC
Confidence 32 222 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++||||||+|||+.++..++++|+++. .+|.|||++||+++++..+||++++|.+|+++..++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 221 (256)
T TIGR03873 158 LLLLDEPTNHLDVRAQLETLALVRELA-----ATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPP 221 (256)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCH
Confidence 999999999999999999999999873 3588999999999999999999999999999877654
No 184
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-36 Score=303.50 Aligned_cols=205 Identities=30% Similarity=0.432 Sum_probs=174.7
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
++++++.|+. ++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 3 ~~~l~~~~~~-----~~l~~is~~i~~Ge~~~i~G~nG~--GKStL------l~~l~G~~~p~~G~v~i~g~~~~~~~~- 68 (235)
T cd03299 3 VENLSKDWKE-----FKLKNVSLEVERGDYFVILGPTGS--GKSVL------LETIAGFIKPDSGKILLNGKDITNLPP- 68 (235)
T ss_pred eEeEEEEeCC-----ceeeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCcCCCceEEEECCEEcCcCCh-
Confidence 7889998853 279999999988 999999 56655 579999999999999999998754222
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.+||+||++.+|+.+|+.||+.+.....+.+..+..+++.++++.+|+.+..++++.+||||||||+++||+|
T Consensus 69 ~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral---- 144 (235)
T cd03299 69 EKRDISYVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARAL---- 144 (235)
T ss_pred hHcCEEEEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHH----
Confidence 2568999999999999999999999876665665566667788999999999999999999999999999865432
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+.+ |++++|||
T Consensus 145 ----------------------------------~~~-----------------------------------p~llllDE 155 (235)
T cd03299 145 ----------------------------------VVN-----------------------------------PKILLLDE 155 (235)
T ss_pred ----------------------------------HcC-----------------------------------CCEEEECC
Confidence 222 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
||+|||+.++..+++.|+++. ...|.|+|++||+++++..+||++++|.+|+++..++
T Consensus 156 Pt~gLD~~~~~~l~~~l~~~~----~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 213 (235)
T cd03299 156 PFSALDVRTKEKLREELKKIR----KEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGK 213 (235)
T ss_pred CcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999873 2248999999999999999999999999999987664
No 185
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2e-36 Score=303.47 Aligned_cols=205 Identities=26% Similarity=0.394 Sum_probs=169.4
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-h-
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-M- 123 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-~- 123 (601)
+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 3 ~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 70 (230)
T TIGR03410 3 VSNLNVYYGQ----SHILRGVSLEVPKGEVTCVLGRNGV--GKTTL------LKTLMGLLPVKSGSIRLDGEDITKLPPH 70 (230)
T ss_pred EEeEEEEeCC----eEEecceeeEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCEEEECCEECCCCCHH
Confidence 7899999863 3599999999988 999999 56665 6799999999999999999987532 2
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcC-CCcccCCccccCChHHHhhhhchhhhc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLG-IPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
...++.+||+||++.+|+.+|+.||+.++....+... .....++++.++ +.+..++++.+||||||||+++||+|
T Consensus 71 ~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~---~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al- 146 (230)
T TIGR03410 71 ERARAGIAYVPQGREIFPRLTVEENLLTGLAALPRRS---RKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARAL- 146 (230)
T ss_pred HHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcCcch---HHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHH-
Confidence 2235689999999999999999999988765443321 234567788887 67778999999999999999865433
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
+.+ |+++|
T Consensus 147 -------------------------------------~~~-----------------------------------p~ill 154 (230)
T TIGR03410 147 -------------------------------------VTR-----------------------------------PKLLL 154 (230)
T ss_pred -------------------------------------hcC-----------------------------------CCEEE
Confidence 222 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||||+|||+.++..++++|.++. +..|+|+|++||+++++..+||+++++.+|+++..++.
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~ 216 (230)
T TIGR03410 155 LDEPTEGIQPSIIKDIGRVIRRLR----AEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAG 216 (230)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHH----HcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999873 22489999999999999999999999999999877654
No 186
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-36 Score=308.30 Aligned_cols=215 Identities=24% Similarity=0.367 Sum_probs=177.2
Q ss_pred CCccchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC--C---CeeE
Q psy7365 43 ASMGAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP--V---SSGT 111 (601)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~--~---~~G~ 111 (601)
+.|+..+..++|+++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++ | ++|+
T Consensus 6 ~~~~~~~l~i~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~p~~~~~G~ 73 (259)
T PRK14274 6 AVMKQEVYQINGMNLWYGQ----HHALKNINLSIPENEVTAIIGPSGC--GKSTF------IKTLNLMIQMVPNVKLTGE 73 (259)
T ss_pred hhcCCceEEEeeEEEEECC----eeeEEeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhhccCCCCCCCceE
Confidence 4566667789999999863 3599999999988 999999 56665 679999997 3 6999
Q ss_pred EEEccccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCCc----ccCCc
Q psy7365 112 AKIYDHDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIPH----KRTSL 183 (601)
Q Consensus 112 v~~~g~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~~----~~~~~ 183 (601)
|+++|.++.. .....++.+||+||++.+|+. ||+||+.|+....+. +.++...++.++++.+|+.+ ..++.
T Consensus 74 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~ 152 (259)
T PRK14274 74 MNYNGSNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ 152 (259)
T ss_pred EEECCEEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCC
Confidence 9999998752 233456789999999988875 999999987665554 33455667888999999853 46889
Q ss_pred cccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchh
Q psy7365 184 ANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSI 263 (601)
Q Consensus 184 ~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 263 (601)
+.+||||||||+++||++ +.+
T Consensus 153 ~~~LS~Gq~qrv~laral--------------------------------------~~~--------------------- 173 (259)
T PRK14274 153 ALSLSGGQQQRLCIARAL--------------------------------------ATN--------------------- 173 (259)
T ss_pred cccCCHHHHHHHHHHHHH--------------------------------------hcC---------------------
Confidence 999999999999865432 233
Q ss_pred HHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccc
Q psy7365 264 LVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQ 343 (601)
Q Consensus 264 ~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv 343 (601)
|+++||||||+|||+.++..+++.|.++. +++|+|++||+++++..+|||+++|.+|+++
T Consensus 174 --------------p~llllDEPt~~LD~~~~~~l~~~l~~~~------~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~ 233 (259)
T PRK14274 174 --------------PDVLLMDEPTSALDPVSTRKIEELILKLK------EKYTIVIVTHNMQQAARVSDQTAFFYMGELV 233 (259)
T ss_pred --------------CCEEEEcCCcccCCHHHHHHHHHHHHHHh------cCCEEEEEEcCHHHHHHhCCEEEEEECCEEE
Confidence 58999999999999999999999999872 3689999999999999999999999999998
Q ss_pred cccCcc
Q psy7365 344 CCGSSV 349 (601)
Q Consensus 344 ~~G~~~ 349 (601)
..|++.
T Consensus 234 ~~g~~~ 239 (259)
T PRK14274 234 ECNDTN 239 (259)
T ss_pred EECCHH
Confidence 777543
No 187
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=322.99 Aligned_cols=198 Identities=19% Similarity=0.323 Sum_probs=166.6
Q ss_pred ccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-----
Q psy7365 54 SLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD----- 122 (601)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~----- 122 (601)
+|+|.|++. .+ |+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 5 ~l~k~~~~~-----~~-~vsl~i~~Ge~~~l~G~nGs--GKSTL------l~~iaGl~~p~~G~I~~~g~~~~~~~~~~~ 70 (352)
T PRK11144 5 NFKQQLGDL-----CL-TVNLTLPAQGITAIFGRSGA--GKTSL------INAISGLTRPQKGRIVLNGRVLFDAEKGIC 70 (352)
T ss_pred EEEEEeCCE-----EE-EEEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEccccccccc
Confidence 789998642 23 89999987 999999 56655 5799999999999999999987431
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
....++.+||+||++.+|+++||.||+.|+.. ....+++.++++.+||.+..++++.+||||||||+++||+|
T Consensus 71 ~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL- 143 (352)
T PRK11144 71 LPPEKRRIGYVFQDARLFPHYKVRGNLRYGMA------KSMVAQFDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRAL- 143 (352)
T ss_pred cchhhCCEEEEcCCcccCCCCcHHHHHHhhhh------hhhHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHH-
Confidence 22346789999999999999999999988643 12345688999999999999999999999999999865432
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
+.+ |+++|
T Consensus 144 -------------------------------------~~~-----------------------------------p~llL 151 (352)
T PRK11144 144 -------------------------------------LTA-----------------------------------PELLL 151 (352)
T ss_pred -------------------------------------HcC-----------------------------------CCEEE
Confidence 232 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||||+|||+..+..+++.|+++. +..|+|+|++|||++++..+||++++|.+|++...+++
T Consensus 152 LDEPts~LD~~~~~~l~~~L~~l~----~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~ 213 (352)
T PRK11144 152 MDEPLASLDLPRKRELLPYLERLA----REINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPL 213 (352)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHH----HhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCH
Confidence 999999999999999999999873 23489999999999999999999999999999877754
No 188
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=308.57 Aligned_cols=211 Identities=24% Similarity=0.327 Sum_probs=173.4
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC---eeEEEEccccC
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS---SGTAKIYDHDI 119 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~---~G~v~~~g~~~ 119 (601)
+..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|+ +|+|.++|.++
T Consensus 4 ~l~~~nl~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~p~~~~~G~i~~~g~~~ 71 (262)
T PRK09984 4 IIRVEKLAKTFNQ----HQALHAVDLNIHHGEMVALLGPSGS--GKSTL------LRHLSGLITGDKSAGSHIELLGRTV 71 (262)
T ss_pred EEEEeeEEEEeCC----eEEEecceEEEcCCcEEEEECCCCC--CHHHH------HHHHhccCCCCCCCceEEEECCEec
Confidence 4568999999853 4599999999988 999999 56665 57999999986 59999999987
Q ss_pred CC------chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhh--------cCCChHHHHHHHHHHHHHcCCCcccCCccc
Q psy7365 120 RT------DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQL--------KQVPKDLAQLEISNMIGDLGIPHKRTSLAN 185 (601)
Q Consensus 120 ~~------~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~--------~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~ 185 (601)
.. .....++++||+||++.+|+.+||.||+.++... .+....+.+.++.++++.+|+.+..++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 151 (262)
T PRK09984 72 QREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVS 151 (262)
T ss_pred ccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCcc
Confidence 43 1234567899999999999999999999876421 111223445678899999999988999999
Q ss_pred cCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHH
Q psy7365 186 TLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILV 265 (601)
Q Consensus 186 ~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 265 (601)
+||||||||+++|||+ +.+
T Consensus 152 ~LS~G~~qrv~laral--------------------------------------~~~----------------------- 170 (262)
T PRK09984 152 TLSGGQQQRVAIARAL--------------------------------------MQQ----------------------- 170 (262)
T ss_pred ccCHHHHHHHHHHHHH--------------------------------------hcC-----------------------
Confidence 9999999999754432 222
Q ss_pred HHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 266 AVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 266 a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|++|||||||+|||+.+++.+++.|+++. +..|+|||++||+++++..+||++++|.+|++...
T Consensus 171 ------------p~llllDEPt~~LD~~~~~~l~~~l~~~~----~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~ 234 (262)
T PRK09984 171 ------------AKVILADEPIASLDPESARIVMDTLRDIN----QNDGITVVVTLHQVDYALRYCERIVALRQGHVFYD 234 (262)
T ss_pred ------------CCEEEecCccccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 58999999999999999999999999873 22489999999999999999999999999998776
Q ss_pred cCc
Q psy7365 346 GSS 348 (601)
Q Consensus 346 G~~ 348 (601)
++.
T Consensus 235 g~~ 237 (262)
T PRK09984 235 GSS 237 (262)
T ss_pred CCH
Confidence 654
No 189
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-36 Score=305.37 Aligned_cols=204 Identities=29% Similarity=0.417 Sum_probs=168.7
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.++||++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. ..
T Consensus 5 ~~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~~~~~ 72 (241)
T PRK14250 5 EFKEVSYSSFG----KEILKDISVKFEGGAIYTIVGPSGA--GKSTL------IKLINRLIDPTEGSILIDGVDIKTIDV 72 (241)
T ss_pred EEEeEEEEeCC----eeeeeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEEhhhcCh
Confidence 48899999853 3599999999988 999999 56655 579999999999999999998753 23
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhhhchhhhc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
...++.+||+||++.+|+ .|+.||+.+.....+ . ...++.++++.+|+. +..++++.+||||||||+++||||+
T Consensus 73 ~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~--~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~ 147 (241)
T PRK14250 73 IDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLKG--E--KNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLA 147 (241)
T ss_pred HHhhhcEEEEecCchhch-hhHHHHHhcchhhcC--c--HHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHh
Confidence 445678999999998886 699999987544322 1 235678899999997 5789999999999999998654332
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
.+ |+++|
T Consensus 148 --------------------------------------~~-----------------------------------p~lll 154 (241)
T PRK14250 148 --------------------------------------NN-----------------------------------PEVLL 154 (241)
T ss_pred --------------------------------------cC-----------------------------------CCEEE
Confidence 22 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||||+|||+.+++.+++.|+++. +..|.|||++||+++++..+||++++|.+|+++..+++
T Consensus 155 lDEPt~~LD~~~~~~l~~~l~~~~----~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 216 (241)
T PRK14250 155 LDEPTSALDPTSTEIIEELIVKLK----NKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKT 216 (241)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHH----HhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCH
Confidence 999999999999999999999873 22489999999999999999999999999998766543
No 190
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=302.56 Aligned_cols=206 Identities=24% Similarity=0.369 Sum_probs=168.6
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+++|++.|+.. . .|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 3 ~~~~l~~~~~~~----~--~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~ 68 (232)
T PRK10771 3 KLTDITWLYHHL----P--MRFDLTVERGERVAILGPSGA--GKSTL------LNLIAGFLTPASGSLTLNGQDHTTTPP 68 (232)
T ss_pred EEEEEEEEECCc----c--ceeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCeecCcCCh
Confidence 488999998631 1 389999988 999999 56665 579999999999999999998754221
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
.++.+||+||++.+|+.+|+.||+.++.............++.++++.+|+++..++++.+||||||||+++||++
T Consensus 69 -~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral--- 144 (232)
T PRK10771 69 -SRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCL--- 144 (232)
T ss_pred -hhccEEEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHH---
Confidence 2467999999999999999999998754321111223456788999999999999999999999999999864432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 145 -----------------------------------~~~-----------------------------------p~lllLD 154 (232)
T PRK10771 145 -----------------------------------VRE-----------------------------------QPILLLD 154 (232)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEe
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||+|||+.++..++++|.++. +..|+|+|++||+++++..+||++++|.+|++...++.
T Consensus 155 EP~~gLD~~~~~~~~~~l~~~~----~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~ 214 (232)
T PRK10771 155 EPFSALDPALRQEMLTLVSQVC----QERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPT 214 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999873 22488999999999999999999999999998876643
No 191
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-36 Score=342.51 Aligned_cols=217 Identities=18% Similarity=0.258 Sum_probs=179.8
Q ss_pred chhhhhcccccccccCC-------CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEE
Q psy7365 47 AYVSLFESLSENRDKLG-------IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAK 113 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~ 113 (601)
.++..++||++.|+..+ ....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.
T Consensus 311 ~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGs--GKSTL------lk~i~Gl~~p~~G~I~ 382 (623)
T PRK10261 311 EPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGS--GKSTT------GRALLRLVESQGGEII 382 (623)
T ss_pred CceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCC--CHHHH------HHHHHcCCCCCCcEEE
Confidence 45677999999986321 135699999999988 999999 56665 5799999999999999
Q ss_pred EccccCCCc----hHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC-cccCCccc
Q psy7365 114 IYDHDIRTD----MTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP-HKRTSLAN 185 (601)
Q Consensus 114 ~~g~~~~~~----~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~-~~~~~~~~ 185 (601)
++|.++... ....++.|||+||++ .+++.+||.||+.+.....+. ++.+.+.++.++++.+||. ...+++++
T Consensus 383 ~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~ 462 (623)
T PRK10261 383 FNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPH 462 (623)
T ss_pred ECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcc
Confidence 999988532 123467899999998 589999999999987655554 3445567889999999996 67899999
Q ss_pred cCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHH
Q psy7365 186 TLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILV 265 (601)
Q Consensus 186 ~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 265 (601)
+|||||||||+||||| +.+
T Consensus 463 ~LSgGqrQRv~iAraL--------------------------------------~~~----------------------- 481 (623)
T PRK10261 463 EFSGGQRQRICIARAL--------------------------------------ALN----------------------- 481 (623)
T ss_pred cCCHHHHHHHHHHHHH--------------------------------------hcC-----------------------
Confidence 9999999999865432 232
Q ss_pred HHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 266 AVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 266 a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|++|||||||+|||+.++..++++|+++. +..|.|||++|||++++..+|||+++|.+|+++..
T Consensus 482 ------------p~llllDEPts~LD~~~~~~i~~ll~~l~----~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~ 545 (623)
T PRK10261 482 ------------PKVIIADEAVSALDVSIRGQIINLLLDLQ----RDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEI 545 (623)
T ss_pred ------------CCEEEEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 58999999999999999999999999984 23489999999999999999999999999999877
Q ss_pred cCc
Q psy7365 346 GSS 348 (601)
Q Consensus 346 G~~ 348 (601)
|++
T Consensus 546 g~~ 548 (623)
T PRK10261 546 GPR 548 (623)
T ss_pred cCH
Confidence 654
No 192
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-36 Score=306.55 Aligned_cols=207 Identities=24% Similarity=0.315 Sum_probs=172.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g~~ 118 (601)
..++++++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++ |++|+|.++|.+
T Consensus 14 l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~p~~p~~G~i~~~g~~ 81 (260)
T PRK10744 14 IQVRNLNFYYGK----FHALKNINLDIAKNQVTAFIGPSGC--GKSTL------LRTFNRMYELYPEQRAEGEILLDGEN 81 (260)
T ss_pred EEEEEEEEEeCC----eEEeeceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccccCCCCCcceEEEECCEE
Confidence 458999999864 3599999999988 999999 56665 579999986 589999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
+.. +....++++||+||++.+|+ .|+.||+.++.... +.+..+..+++.++++.+|+. +..++.+.+||||
T Consensus 82 ~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G 160 (260)
T PRK10744 82 ILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGG 160 (260)
T ss_pred ccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHH
Confidence 742 23456778999999998887 89999999876544 455556667789999999984 4578899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||||+ .+
T Consensus 161 q~qrv~laral~--------------------------------------~~---------------------------- 174 (260)
T PRK10744 161 QQQRLCIARGIA--------------------------------------IR---------------------------- 174 (260)
T ss_pred HHHHHHHHHHHH--------------------------------------CC----------------------------
Confidence 999998654332 22
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.+++.+++.|+++. .+.|||++||+++++..+||++++|++|+++..+..
T Consensus 175 -------p~lllLDEPt~~LD~~~~~~l~~~L~~~~------~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (260)
T PRK10744 175 -------PEVLLLDEPCSALDPISTGRIEELITELK------QDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNT 239 (260)
T ss_pred -------CCEEEEcCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 368999999999999999999999999999876643
No 193
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-36 Score=308.62 Aligned_cols=209 Identities=21% Similarity=0.256 Sum_probs=173.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.+++|++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. ..
T Consensus 9 ~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~~ 76 (265)
T PRK10253 9 RGEQLTLGYGK----YTVAENLTVEIPDGHFTAIIGPNGC--GKSTL------LRTLSRLMTPAHGHVWLDGEHIQHYAS 76 (265)
T ss_pred EEEEEEEEECC----EEEeeecceEECCCCEEEEECCCCC--CHHHH------HHHHcCCCCCCCcEEEECCEEhhhCCH
Confidence 48999999863 4599999999988 999999 56665 679999999999999999998754 33
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHh-hcC---CChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ-LKQ---VPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~-~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
...++.+||+||++.+|+.+|+.||+.++.. ..+ ...+....++.++++.+|+.+..++++.+||||||||+++||
T Consensus 77 ~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lar 156 (265)
T PRK10253 77 KEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAM 156 (265)
T ss_pred HHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHH
Confidence 4456689999999999999999999987531 111 112333457889999999998899999999999999997554
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
|+ +.+ |+
T Consensus 157 al--------------------------------------~~~-----------------------------------p~ 163 (265)
T PRK10253 157 VL--------------------------------------AQE-----------------------------------TA 163 (265)
T ss_pred HH--------------------------------------hcC-----------------------------------CC
Confidence 32 222 58
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++||||||+|||+.++..+++.|.++. +..|.|+|++||+++++..+||++++|.+|+++..+++
T Consensus 164 llllDEPt~gLD~~~~~~l~~~L~~l~----~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~ 228 (265)
T PRK10253 164 IMLLDEPTTWLDISHQIDLLELLSELN----REKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAP 228 (265)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999873 22489999999999999999999999999998877653
No 194
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-36 Score=303.50 Aligned_cols=207 Identities=26% Similarity=0.359 Sum_probs=171.3
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC---CCeeEEEEccccCC
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP---VSSGTAKIYDHDIR 120 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~---~~~G~v~~~g~~~~ 120 (601)
+.++++++.|+. ..+++|+||++.+ +||||+ ||||| .++|+|+++ |++|+|+++|+++.
T Consensus 3 ~~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~G~i~~~g~~i~ 70 (246)
T PRK14269 3 AKTTNLNLFYGK----KQALFDINMQIEQNKITALIGASGC--GKSTF------LRCFNRMNDKIAKIDGLVEIEGKDVK 70 (246)
T ss_pred eeeeeeEEEECC----EeeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccCCCCCCceEEEECCEecc
Confidence 457899999863 4599999999988 999999 56665 579999984 79999999999885
Q ss_pred C-chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC--ChHHHHHHHHHHHHHcCCC----cccCCccccCChHHHh
Q psy7365 121 T-DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV--PKDLAQLEISNMIGDLGIP----HKRTSLANTLSGGMQR 193 (601)
Q Consensus 121 ~-~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG~~q 193 (601)
. +....++.+||+||++.+|+ .|++||+.++....+. +....+.++.++++.+|+. +..++.+.+|||||||
T Consensus 71 ~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~q 149 (246)
T PRK14269 71 NQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQ 149 (246)
T ss_pred cCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHH
Confidence 4 23455778999999999887 6999999987654443 2244556788999999995 4568899999999999
Q ss_pred hhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhh
Q psy7365 194 KLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAM 273 (601)
Q Consensus 194 r~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 273 (601)
|+++||+|+ .+
T Consensus 150 rv~laral~--------------------------------------~~------------------------------- 160 (246)
T PRK14269 150 RLCIARALA--------------------------------------IK------------------------------- 160 (246)
T ss_pred HHHHHHHHh--------------------------------------cC-------------------------------
Confidence 998654332 32
Q ss_pred ccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 274 SFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 274 ~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+.+.|.++ . +|+|+|++||+++++...||++++|.+|+++..++.
T Consensus 161 ----p~lllLDEP~~~LD~~~~~~l~~~l~~~-----~-~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~ 225 (246)
T PRK14269 161 ----PKLLLLDEPTSALDPISSGVIEELLKEL-----S-HNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGES 225 (246)
T ss_pred ----CCEEEEcCCcccCCHHHHHHHHHHHHHH-----h-CCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCH
Confidence 5899999999999999999999999987 2 378999999999999999999999999999876643
No 195
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-36 Score=307.00 Aligned_cols=209 Identities=22% Similarity=0.321 Sum_probs=172.5
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEcc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYD 116 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g 116 (601)
..+.+++|++.|+. ..+++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|+++|
T Consensus 18 ~~l~~~nl~~~~~~----~~il~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 18 IKMRARDVSVFYGE----KQALFDVDLDIPEKTVTAFIGPSGC--GKSTF------LRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred ceEEEEeEEEEECC----EEEEEEEEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhhcccccCCCCceEEEECC
Confidence 35569999999863 4599999999988 999999 56665 5799999975 899999999
Q ss_pred ccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC--ChHHHHHHHHHHHHHcCCCc----ccCCccccC
Q psy7365 117 HDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV--PKDLAQLEISNMIGDLGIPH----KRTSLANTL 187 (601)
Q Consensus 117 ~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~----~~~~~~~~L 187 (601)
.++.. .....++.+||+||++.+|+. ||.||+.|+....+. +......++.++++.+|+.+ ..++++.+|
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~L 164 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGL 164 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccC
Confidence 98753 234456789999999998875 999999987654443 33445567889999999964 467889999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
|||||||+++||+| +.+
T Consensus 165 SgGq~qrv~laral--------------------------------------~~~------------------------- 181 (267)
T PRK14235 165 SGGQQQRLCIARAI--------------------------------------AVS------------------------- 181 (267)
T ss_pred CHHHHHHHHHHHHH--------------------------------------HcC-------------------------
Confidence 99999999865432 233
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|++|||||||+|||+.++..+.++|+++. .++|||++||+++++..+||++++|.+|+++..+.
T Consensus 182 ----------p~lllLDEPt~~LD~~~~~~l~~~L~~l~------~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 182 ----------PEVILMDEPCSALDPIATAKVEELIDELR------QNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred ----------CCEEEEeCCCcCCCHHHHHHHHHHHHHHh------cCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 58999999999999999999999999872 26899999999999999999999999999987664
Q ss_pred c
Q psy7365 348 S 348 (601)
Q Consensus 348 ~ 348 (601)
.
T Consensus 246 ~ 246 (267)
T PRK14235 246 T 246 (267)
T ss_pred H
Confidence 3
No 196
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=5.2e-36 Score=298.85 Aligned_cols=206 Identities=25% Similarity=0.383 Sum_probs=170.9
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.++++++.|+.......+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGs--GKStL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 74 (220)
T TIGR02982 3 SIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGS--GKTTL------LTLIGGLRSVQEGSLKVLGQELYGASE 74 (220)
T ss_pred EEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEECCEEhHhcCH
Confidence 4789999985422236799999999988 999999 56665 5799999999999999999987431
Q ss_pred --hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc-CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 123 --MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK-QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 123 --~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
....++.+||+||++.+|+.+|+.||+.++.... ..+..+...++.++++.+|+.+..++.+.+||||||||+++||
T Consensus 75 ~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~lar 154 (220)
T TIGR02982 75 KELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIAR 154 (220)
T ss_pred hHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHH
Confidence 1235678999999999999999999999876544 2455566678899999999999999999999999999997544
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
++ +. .|+
T Consensus 155 al--------------------------------------~~-----------------------------------~p~ 161 (220)
T TIGR02982 155 AL--------------------------------------VH-----------------------------------RPK 161 (220)
T ss_pred HH--------------------------------------hc-----------------------------------CCC
Confidence 32 22 258
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
++||||||+|||+.++..+++.|+++. +..|+|+|++||+++. .++||++++|.+|++
T Consensus 162 illlDEP~~~LD~~~~~~l~~~l~~~~----~~~~~tii~~sh~~~~-~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 162 LVLADEPTAALDSKSGRDVVELMQKLA----REQGCTILIVTHDNRI-LDVADRIVHMEDGKL 219 (220)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHH-HhhCCEEEEEECCEE
Confidence 999999999999999999999999873 2248999999999985 579999999999875
No 197
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-36 Score=300.02 Aligned_cols=206 Identities=28% Similarity=0.386 Sum_probs=175.8
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+++|++.|+. ...++|+||++.+ +||||+ ||||| .++|+|+++|++|+|+++|.++.... .
T Consensus 3 ~~~l~~~~~~----~~il~~i~~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~g~~~~~~G~i~~~g~~~~~~~-~ 69 (232)
T cd03300 3 LENVSKFYGG----FVALDGVSLDIKEGEFFTLLGPSGC--GKTTL------LRLIAGFETPTSGEILLDGKDITNLP-P 69 (232)
T ss_pred EEeEEEEeCC----eeeeccceEEECCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEEcCcCC-h
Confidence 7899999863 3599999999988 999999 67765 67999999999999999999885422 2
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.+||+||++.+|+.+|+.||+.+.....+.+.....+++.++++.+|+.+..++.+.+|||||+||+++||+|
T Consensus 70 ~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral---- 145 (232)
T cd03300 70 HKRPVNTVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARAL---- 145 (232)
T ss_pred hhcceEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHH----
Confidence 3568999999999999999999998877666665556667788999999999999999999999999999765432
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+.+ |+++||||
T Consensus 146 ----------------------------------~~~-----------------------------------p~llllDE 156 (232)
T cd03300 146 ----------------------------------VNE-----------------------------------PKVLLLDE 156 (232)
T ss_pred ----------------------------------hcC-----------------------------------CCEEEEcC
Confidence 233 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
||+|||+.++..++++|+++. +..|.|||++||+++++...||++++|.+|++...++
T Consensus 157 P~~gLD~~~~~~l~~~l~~~~----~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~ 214 (232)
T cd03300 157 PLGALDLKLRKDMQLELKRLQ----KELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGT 214 (232)
T ss_pred CcccCCHHHHHHHHHHHHHHH----HHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 999999999999999999873 2248999999999999999999999999999876654
No 198
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=5.4e-36 Score=299.17 Aligned_cols=200 Identities=30% Similarity=0.448 Sum_probs=169.5
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
++++++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 3 l~~v~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~~~~~~~~--~ 68 (223)
T TIGR03740 3 TKNLSKRFGK----QTAVNNISLTVPKNSVYGLLGPNGA--GKSTL------LKMITGILRPTSGEIIFDGHPWTRK--D 68 (223)
T ss_pred EEeEEEEECC----EEEEeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEecccc--c
Confidence 7889998863 4599999999988 999999 56665 5799999999999999999876431 1
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
++.++|+||++.+|+.+|+.||+.++....+.+ ..++.++++.+|+++..++.+.+|||||+||+++||++
T Consensus 69 -~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral---- 139 (223)
T TIGR03740 69 -LHKIGSLIESPPLYENLTARENLKVHTTLLGLP----DSRIDEVLNIVDLTNTGKKKAKQFSLGMKQRLGIAIAL---- 139 (223)
T ss_pred -cccEEEEcCCCCccccCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCcHHHhhhHhhCCHHHHHHHHHHHHH----
Confidence 357999999999999999999998876655543 24578899999999999999999999999999754332
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+.+ |++++|||
T Consensus 140 ----------------------------------~~~-----------------------------------p~llllDE 150 (223)
T TIGR03740 140 ----------------------------------LNH-----------------------------------PKLLILDE 150 (223)
T ss_pred ----------------------------------hcC-----------------------------------CCEEEECC
Confidence 222 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||+|||+.+++.++++|+++. .+|.|+|++||+.+++...||++++|.+|++...+.+
T Consensus 151 P~~~LD~~~~~~l~~~L~~~~-----~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~ 208 (223)
T TIGR03740 151 PTNGLDPIGIQELRELIRSFP-----EQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKI 208 (223)
T ss_pred CccCCCHHHHHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecCh
Confidence 999999999999999999872 3588999999999999999999999999998876643
No 199
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-36 Score=304.93 Aligned_cols=208 Identities=23% Similarity=0.326 Sum_probs=171.8
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~~ 118 (601)
..++++++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.+
T Consensus 5 l~i~~v~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~laGl~~~~~~~~~~G~I~~~g~~ 72 (258)
T PRK14241 5 IDVKDLNIYYGS----FHAVEDVNLNIEPRSVTAFIGPSGC--GKSTV------LRTLNRMHEVIPGARVEGEVLLDGED 72 (258)
T ss_pred EEEeeEEEEECC----EeeeeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHhccCCcccCCCcceEEEECCEe
Confidence 458999999863 3599999999988 999999 56665 5799999974 79999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
+.. .....++.+||+||++.+|+.+||.||+.++....+. +....++++.++++.+|+. +..++.+.+||||
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G 152 (258)
T PRK14241 73 LYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGG 152 (258)
T ss_pred ccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHH
Confidence 742 2334567899999999999999999999987655443 4455566788999999984 4678999999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+|+ .+
T Consensus 153 ~~qrv~laral~--------------------------------------~~---------------------------- 166 (258)
T PRK14241 153 QQQRLCIARAIA--------------------------------------VE---------------------------- 166 (258)
T ss_pred HHHHHHHHHHHh--------------------------------------cC----------------------------
Confidence 999998654332 22
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec------CCcccc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA------AGKLQC 344 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~------~GkIv~ 344 (601)
|+++||||||+|||+.++..++++|+++. +++|||++||+++++..+||++++|. +|+++.
T Consensus 167 -------p~llllDEPt~~LD~~~~~~l~~~l~~~~------~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 167 -------PDVLLMDEPCSALDPISTLAIEDLINELK------QDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred -------CCEEEEcCCCccCCHHHHHHHHHHHHHHh------cCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 58999999999999999999999999872 35899999999999999999999997 688776
Q ss_pred ccCc
Q psy7365 345 CGSS 348 (601)
Q Consensus 345 ~G~~ 348 (601)
.++.
T Consensus 234 ~~~~ 237 (258)
T PRK14241 234 IDDT 237 (258)
T ss_pred cCCH
Confidence 6543
No 200
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.1e-34 Score=338.37 Aligned_cols=125 Identities=25% Similarity=0.404 Sum_probs=110.1
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCc-ccccccCcCChHHHHHHHHHHHHhC---CCCEEEEECCCCCC
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLG---NTPLIFLDEPTSGM 461 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~-~~~~~~~~LSgGqkQRl~lA~AL~~---~P~lLlLDEPTsGL 461 (601)
+||+.|.+.|+..+.++ .+..++|+.+||.. ..++++.+|||||+||+.||++|+. +|+++||||||+||
T Consensus 789 ~~tv~e~~~f~~~~~~i------~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgL 862 (924)
T TIGR00630 789 DMTVEEAYEFFEAVPSI------SRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGL 862 (924)
T ss_pred CCcHHHHHHHHHhccch------hHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCC
Confidence 46888888887654332 13457899999975 4789999999999999999999997 59999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEE------eCCEEEEecCHHHH
Q psy7365 462 DPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLGSATHL 517 (601)
Q Consensus 462 D~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL------~~G~iv~~G~~~~L 517 (601)
|+..+..++++|+++.++|.|||++||+++++. .||++++| ++|++++.|+++++
T Consensus 863 D~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~-~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 863 HFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIK-TADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-hCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 999999999999999888999999999999985 69999999 79999999999875
No 201
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.1e-35 Score=305.58 Aligned_cols=273 Identities=19% Similarity=0.298 Sum_probs=204.1
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc--ccccccccCCCCcccC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA--PQKSYIGYCPQFDALN 384 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~--~~~~~ig~v~Q~~~l~ 384 (601)
+++++ +++++...-++.+++++... .|+++++ .+..|+..+.+.+.... ..++.+||+||++.++
T Consensus 14 ~~~~l---~~is~~i~~Gei~~l~G~NG---aGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~ 87 (301)
T TIGR03522 14 TQNAL---DEVSFEAQKGRIVGFLGPNG---AGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLY 87 (301)
T ss_pred CEEEE---EEeEEEEeCCeEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEecCCCCCC
Confidence 44544 89999999999999997422 4555443 23344444444443221 2356799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|+.||+.++..+++.+.++..++++++++.++|.+..++++++||||||||++||+||+++|++|||||||+||||.
T Consensus 88 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~ 167 (301)
T TIGR03522 88 LDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPN 167 (301)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHH
Confidence 99999999999888877666666677899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEecCCCchhHHHHHh
Q psy7365 465 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCAEGRSADAQTYLS 544 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~~~~~~~~~~~l~ 544 (601)
+++.++++|+++++ ++|||++||++++++++|||+++|++|++++.|++++++.... ...+.+.+....... ...
T Consensus 168 ~~~~l~~~l~~~~~-~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~-~~~~~i~~~~~~~~~---~~~ 242 (301)
T TIGR03522 168 QLVEIRNVIKNIGK-DKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAANK-KQVIEVEFEEQIDLQ---LFE 242 (301)
T ss_pred HHHHHHHHHHHhcC-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHhcC-CceEEEEecCcchhH---HHh
Confidence 99999999999864 7999999999999999999999999999999999999987643 234455543211111 111
Q ss_pred hcCCCceeEEe-eCcEEEEEEcCCcccHHHHHHHHHHccccCCCeeEEEecCCCCCCC
Q psy7365 545 LNLPVADLVET-HATQLQYRISGAVSDLGALFRTLESAKTEAGLIVDYSLSQTSLEDS 601 (601)
Q Consensus 545 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~i~~~~v~~~sLEdv 601 (601)
.......... .++.+.+..+......+++...+.+. +.. +.++...++||||+
T Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~sLe~~ 296 (301)
T TIGR03522 243 -TLEEISSVKNTGGNTWKLTFETPNDTRPEIFKLAQQK--GLK-LISLQQNEKNLEQV 296 (301)
T ss_pred -hccccceeeecCCCeEEEEEcCccchHHHHHHHHHHC--CCc-eEEEEeCCCCHHHH
Confidence 1122222222 23344444433333456677766544 345 88999999999984
No 202
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-36 Score=302.82 Aligned_cols=208 Identities=26% Similarity=0.356 Sum_probs=172.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC--C---CeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP--V---SSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~--~---~~G~v~~~g~~ 118 (601)
..++++++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++ | ++|+|+++|.+
T Consensus 5 l~~~nl~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~v~~~g~~ 72 (252)
T PRK14256 5 VKLEQLNVHFGK----NHAVKDVSMDFPENSVTAIIGPSGC--GKSTV------LRSINRMHDLVPSARVTGKILLDDTD 72 (252)
T ss_pred EEEEEEEEEeCC----eeEEecceEEEcCCCEEEEECCCCC--CHHHH------HHHHHhcccCCCCCCCceEEEECCEE
Confidence 358999999863 3599999999988 999999 57665 679999986 4 69999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCCc----ccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIPH----KRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~~----~~~~~~~~LSgG 190 (601)
+.. ....+++.++|+||++.+|+.+|+.||+.++....+. +..+...++.++++.+|+.. ..++.+.+||||
T Consensus 73 i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G 152 (252)
T PRK14256 73 IYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGG 152 (252)
T ss_pred cccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHH
Confidence 753 2334577899999999999999999999886655442 34455567889999999853 567889999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+| +.+
T Consensus 153 ~~qrl~laral--------------------------------------~~~---------------------------- 166 (252)
T PRK14256 153 QQQRLCIARTI--------------------------------------AVK---------------------------- 166 (252)
T ss_pred HHHHHHHHHHH--------------------------------------hcC----------------------------
Confidence 99999864432 222
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.+++.+++.|+++. +++|||++||+++++..+||++++|.+|++...++.
T Consensus 167 -------p~llllDEP~~gLD~~~~~~l~~~l~~~~------~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 167 -------PEVILMDEPASALDPISTLKIEELIEELK------EKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred -------CCEEEEcCCcccCCHHHHHHHHHHHHHHH------hCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 257999999999999999999999999999877653
No 203
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=6.4e-36 Score=315.57 Aligned_cols=184 Identities=28% Similarity=0.394 Sum_probs=158.4
Q ss_pred ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC
Q psy7365 79 LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV 158 (601)
Q Consensus 79 ~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~ 158 (601)
+||||| ||||| .++|+|+++|++|+|.++|+++..... .++.+||+||++.+|+++||.||+.|+....+.
T Consensus 2 ~G~nGs--GKSTL------l~~iaGl~~p~~G~I~i~g~~i~~~~~-~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~ 72 (325)
T TIGR01187 2 LGPSGC--GKTTL------LRLLAGFEQPDSGSIMLDGEDVTNVPP-HLRHINMVFQSYALFPHMTVEENVAFGLKMRKV 72 (325)
T ss_pred cCCCCC--CHHHH------HHHHHCCCCCCceEEEECCEECCCCCH-HHCCEEEEecCccccCCCcHHHHHHHHHhhcCC
Confidence 699999 56665 579999999999999999998854222 356899999999999999999999998776666
Q ss_pred ChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHH
Q psy7365 159 PKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIV 238 (601)
Q Consensus 159 ~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 238 (601)
++.+.++++.++++.+||.+..++++.+||||||||+++||+|
T Consensus 73 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qRvalaraL------------------------------------- 115 (325)
T TIGR01187 73 PRAEIKPRVLEALRLVQLEEFADRKPHQLSGGQQQRVALARAL------------------------------------- 115 (325)
T ss_pred CHHHHHHHHHHHHHHcCCcchhcCChhhCCHHHHHHHHHHHHH-------------------------------------
Confidence 6666677889999999999999999999999999999865433
Q ss_pred hhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEE
Q psy7365 239 AINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVI 318 (601)
Q Consensus 239 ~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI 318 (601)
+.+ |+++||||||+|||+..+..+++.|+++. +..|+|+|
T Consensus 116 -~~~-----------------------------------p~lllLDEP~s~LD~~~~~~l~~~l~~l~----~~~g~tii 155 (325)
T TIGR01187 116 -VFK-----------------------------------PKILLLDEPLSALDKKLRDQMQLELKTIQ----EQLGITFV 155 (325)
T ss_pred -HhC-----------------------------------CCEEEEeCCCccCCHHHHHHHHHHHHHHH----HhcCCEEE
Confidence 222 58999999999999999999999999874 23489999
Q ss_pred EEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 319 LTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 319 ~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
++||+++++..+||++++|.+|++...+++
T Consensus 156 ivTHd~~e~~~~~d~i~vl~~G~i~~~g~~ 185 (325)
T TIGR01187 156 FVTHDQEEAMTMSDRIAIMRKGKIAQIGTP 185 (325)
T ss_pred EEeCCHHHHHHhCCEEEEEECCEEEEEcCH
Confidence 999999999999999999999998776643
No 204
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=9.7e-36 Score=299.24 Aligned_cols=189 Identities=25% Similarity=0.365 Sum_probs=158.7
Q ss_pred eecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHHhcccEEEEccCCCCCCC
Q psy7365 69 ISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCPQYNALFDK 142 (601)
Q Consensus 69 ~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~Q~~~~~~~ 142 (601)
++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.... ...+|+||++.+|+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~~----~~~~~v~q~~~l~~~ 68 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGC--GKSTL------LNLISGLAQPTSGGVILEGKQITEPG----PDRMVVFQNYSLLPW 68 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEECCCCC----hhheEEecCcccCCC
Confidence 4789999988 999999 56665 57999999999999999999875421 124899999999999
Q ss_pred CCHHHHHHHhHhh--cCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhh
Q psy7365 143 LTVEEHMWFYSQL--KQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNV 220 (601)
Q Consensus 143 ~tv~e~l~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~ 220 (601)
+||.||+.++... .+.++.+.++++.++++.+|+.+..++++.+||||||||+++||++
T Consensus 69 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al------------------- 129 (230)
T TIGR01184 69 LTVRENIALAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARAL------------------- 129 (230)
T ss_pred CCHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHH-------------------
Confidence 9999999886431 2344555566788999999999989999999999999999854432
Q ss_pred hHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHH
Q psy7365 221 ILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWE 300 (601)
Q Consensus 221 ~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~ 300 (601)
+.+ |+++||||||+|||+.++..+++
T Consensus 130 -------------------~~~-----------------------------------p~lllLDEPt~gLD~~~~~~l~~ 155 (230)
T TIGR01184 130 -------------------SIR-----------------------------------PKVLLLDEPFGALDALTRGNLQE 155 (230)
T ss_pred -------------------HcC-----------------------------------CCEEEEcCCCcCCCHHHHHHHHH
Confidence 232 58999999999999999999999
Q ss_pred HHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 301 LLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 301 ~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
.|.++. +..|+|||++||+++++..+||++++|.+|+++..+
T Consensus 156 ~l~~~~----~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 156 ELMQIW----EEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHH----HhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999873 234899999999999999999999999999988665
No 205
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=7.7e-35 Score=308.82 Aligned_cols=270 Identities=24% Similarity=0.390 Sum_probs=199.0
Q ss_pred cCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc--ccccccccCCCCcc
Q psy7365 312 LSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA--PQKSYIGYCPQFDA 382 (601)
Q Consensus 312 ~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~--~~~~~ig~v~Q~~~ 382 (601)
+.++.++ +++++-..-++.+++++... .|+++++ ++..|..++.|.+.... ..++.+||+||++.
T Consensus 51 y~~~~~l---~~is~~i~~Gei~gLlGpNG---aGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~ 124 (340)
T PRK13536 51 YGDKAVV---NGLSFTVASGECFGLLGPNG---AGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIGVVPQFDN 124 (340)
T ss_pred ECCEEEE---eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEEEEeCCcc
Confidence 3344444 88999889999999997522 4555443 33445555555554322 24678999999999
Q ss_pred cCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCC
Q psy7365 383 LNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMD 462 (601)
Q Consensus 383 l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD 462 (601)
+++.+|++||+.++..+++.+..+..++++++++.++|.+..++++.+||||||||++||+||+++|++|||||||+|||
T Consensus 125 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD 204 (340)
T PRK13536 125 LDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLD 204 (340)
T ss_pred CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCC
Confidence 99999999999988877776555556678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEecCCCchhHHHH
Q psy7365 463 PGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCAEGRSADAQTY 542 (601)
Q Consensus 463 ~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~~~~~~~~~~~ 542 (601)
|.+++.++++|++++++|+|||++||++++++.+||||++|++|++++.|+++++.+.......+.+.... .......
T Consensus 205 ~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~--~~~~~~~ 282 (340)
T PRK13536 205 PHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDEHIGCQVIEIYGGD--PHELSSL 282 (340)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhccCceEEEEEcCC--hHHHHHH
Confidence 99999999999999878999999999999999999999999999999999999998765443333333211 1112111
Q ss_pred HhhcCCCceeEEeeCcEEEEEEcCCcccHHHHHHHHHHccccCCCeeEEEecCCCCCCC
Q psy7365 543 LSLNLPVADLVETHATQLQYRISGAVSDLGALFRTLESAKTEAGLIVDYSLSQTSLEDS 601 (601)
Q Consensus 543 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~i~~~~v~~~sLEdv 601 (601)
.. +........+..+.+... ....+...+.+. . ..++.+.++||||+
T Consensus 283 ~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~----~-~~~~~~~~~sLEdv 329 (340)
T PRK13536 283 VK---PYARRIEVSGETLFCYAP----DPEQVRVQLRGR----A-GLRLLQRPPNLEDV 329 (340)
T ss_pred hh---cccceEEecCCEEEEEeC----CHHHHHHHHHhc----c-CceEEEcCCCHHHH
Confidence 11 111122223333333221 234455555321 1 12677899999985
No 206
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.2e-36 Score=294.63 Aligned_cols=194 Identities=24% Similarity=0.279 Sum_probs=164.4
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 3 ~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~p~~G~v~~~g~~~~~~~~ 70 (204)
T PRK13538 3 EARNLACERDE----RILFSGLSFTLNAGELVQIEGPNGA--GKTSL------LRILAGLARPDAGEVLWQGEPIRRQRD 70 (204)
T ss_pred EEEEEEEEECC----EEEEecceEEECCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEEcccchH
Confidence 47899999864 3599999999988 999999 56665 579999999999999999998865444
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.++|++|++.+++.+|+.||+.++....+. ....+++++++.+|+.+..++++.+||||||||+++|+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~~---~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al--- 144 (204)
T PRK13538 71 EYHQDLLYLGHQPGIKTELTALENLRFYQRLHGP---GDDEALWEALAQVGLAGFEDVPVRQLSAGQQRRVALARLW--- 144 (204)
T ss_pred HhhhheEEeCCccccCcCCcHHHHHHHHHHhcCc---cHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHH---
Confidence 5567899999999999999999999987655432 2345688999999999888999999999999999754432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+++ |+++|||
T Consensus 145 -----------------------------------~~~-----------------------------------p~llllD 154 (204)
T PRK13538 145 -----------------------------------LTR-----------------------------------APLWILD 154 (204)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEe
Confidence 233 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEe
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAII 337 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL 337 (601)
|||+|||+.++..++++|+++. .+|.|+|++||+.+++....+|++.+
T Consensus 155 EPt~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 155 EPFTAIDKQGVARLEALLAQHA-----EQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCCccCCHHHHHHHHHHHHHHH-----HCCCEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999873 35789999999999999988888877
No 207
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-36 Score=304.29 Aligned_cols=195 Identities=23% Similarity=0.339 Sum_probs=172.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
.++++-..-++...+++... .|+++++ +++.|+..+.|.++... ..|++||++||+++++...|
T Consensus 23 ~~vsL~I~~GeI~GIIG~SG---AGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrT 99 (339)
T COG1135 23 DDVSLEIPKGEIFGIIGYSG---AGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRT 99 (339)
T ss_pred ccceEEEcCCcEEEEEcCCC---CcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHHHhhccEEeccccccccch
Confidence 77888889999999997522 4455443 34556665666444321 24788999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
|++|+.|...+.|.++.+.++++.++|+.+||+++.+++|.+|||||||||+|||||+.+|++|++|||||.|||++.+.
T Consensus 100 V~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~s 179 (339)
T COG1135 100 VFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQS 179 (339)
T ss_pred HHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 469 LWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 469 i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+.++|++++++ |.||+++||.|+.+.++||||++|++|+++..|+..++..
T Consensus 180 IL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~ 231 (339)
T COG1135 180 ILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFA 231 (339)
T ss_pred HHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhc
Confidence 99999999876 9999999999999999999999999999999999888754
No 208
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.1e-35 Score=300.13 Aligned_cols=208 Identities=25% Similarity=0.388 Sum_probs=175.5
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|+. .+.++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++... .
T Consensus 2 ~i~~l~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~G~~~~~~G~i~i~g~~~~~~-~ 68 (237)
T TIGR00968 2 EIANISKRFGS----FQALDDVNLEVPTGSLVALLGPSGS--GKSTL------LRIIAGLEQPDSGRIRLNGQDATRV-H 68 (237)
T ss_pred EEEEEEEEECC----eeeeeeEEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCceEEEECCEEcCcC-C
Confidence 37889998863 3599999999988 999999 57665 5799999999999999999987532 2
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.++|+||++.+|+..|+.||+.+.....+.+.....+++.++++.+++.+..++.+.+|||||+||+++||+|
T Consensus 69 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral--- 145 (237)
T TIGR00968 69 ARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARAL--- 145 (237)
T ss_pred hhhcCEEEEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHH---
Confidence 24678999999999999999999998876655555555556788999999999889999999999999999754432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 146 -----------------------------------~~~-----------------------------------p~llllD 155 (237)
T TIGR00968 146 -----------------------------------AVE-----------------------------------PQVLLLD 155 (237)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEc
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||+|||+.++..+++.|.++. +..|+|+|++||+++++..+||++++|.+|+++..++.
T Consensus 156 EP~~~LD~~~~~~~~~~l~~~~----~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~ 215 (237)
T TIGR00968 156 EPFGALDAKVRKELRSWLRKLH----DEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSP 215 (237)
T ss_pred CCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCH
Confidence 9999999999999999999873 22379999999999999999999999999999876654
No 209
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=301.70 Aligned_cols=209 Identities=26% Similarity=0.357 Sum_probs=170.6
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCC--CC---CeeEEEEcc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGML--PV---SSGTAKIYD 116 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~--~~---~~G~v~~~g 116 (601)
++..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+. +| ++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~~----~~~l~~~s~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 4 PILQVSDLSVYYNK----KKALNSVSLDFYPNEITALIGPSGS--GKSTL------LRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred ceEEEEeeEEEECC----eeeeeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHhcccccCCCCCccceEEECC
Confidence 34568999999863 3599999999988 999999 57665 67999995 36 599999999
Q ss_pred ccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCCh-HHHHHHHHHHHHHcCCC----cccCCccccCC
Q psy7365 117 HDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPK-DLAQLEISNMIGDLGIP----HKRTSLANTLS 188 (601)
Q Consensus 117 ~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~gl~----~~~~~~~~~LS 188 (601)
.++.. .....++.+||+||++.+|+ .||.||+.++....+... .....++.++++.+|+. +..++.+.+||
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS 150 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLS 150 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCC
Confidence 98743 22345678999999998887 899999998765555432 33456788899999974 35688999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+++||++ +.+
T Consensus 151 ~G~~qrv~laral--------------------------------------~~~-------------------------- 166 (252)
T PRK14239 151 GGQQQRVCIARVL--------------------------------------ATS-------------------------- 166 (252)
T ss_pred HHHHHHHHHHHHH--------------------------------------hcC--------------------------
Confidence 9999999754432 232
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. +++|||++||+++++...|||+++|.+|+++..++.
T Consensus 167 ---------p~llllDEPt~~LD~~~~~~l~~~l~~~~------~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 231 (252)
T PRK14239 167 ---------PKIILLDEPTSALDPISAGKIEETLLGLK------DDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDT 231 (252)
T ss_pred ---------CCEEEEcCCccccCHHHHHHHHHHHHHHh------hCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 258999999999999999999999999999876643
No 210
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=300.30 Aligned_cols=207 Identities=22% Similarity=0.325 Sum_probs=170.9
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~~ 118 (601)
..+++|++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.+
T Consensus 4 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~~~~~~G~i~~~g~~ 71 (250)
T PRK14240 4 ISVKDLDLFYGD----FQALKKINLDIEENQVTALIGPSGC--GKSTF------LRTLNRMNDLIPSVKIEGEVLLDGQD 71 (250)
T ss_pred EEEEEEEEEECC----ceeeecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhccccccCCCCCceEEEECCEE
Confidence 348999999863 3599999999988 999999 56665 6799999763 79999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
+.. +....++.+||+||++.+|+ +|+.||+.++....+. +....++++.++++.+++. +..++++.+||||
T Consensus 72 ~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G 150 (250)
T PRK14240 72 IYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGG 150 (250)
T ss_pred ccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHH
Confidence 753 23345778999999998887 8999999987665554 3344567788899999874 4568899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+|+ .+
T Consensus 151 ~~qrv~laral~--------------------------------------~~---------------------------- 164 (250)
T PRK14240 151 QQQRLCIARALA--------------------------------------VE---------------------------- 164 (250)
T ss_pred HHHHHHHHHHHh--------------------------------------cC----------------------------
Confidence 999998654332 22
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|+++. .++|||++||+++++..+||++++|.+|+++..++.
T Consensus 165 -------p~llllDEP~~~LD~~~~~~l~~~l~~~~------~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~ 229 (250)
T PRK14240 165 -------PEVLLMDEPTSALDPISTLKIEELIQELK------KDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDT 229 (250)
T ss_pred -------CCEEEEeCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 368999999999999999999999999999876643
No 211
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=305.55 Aligned_cols=202 Identities=21% Similarity=0.264 Sum_probs=165.8
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEc
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIY 115 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~ 115 (601)
..+..+++|++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++
T Consensus 11 ~~~l~i~nl~~~~~~----~~il~~is~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 11 NIIISLQNVTISYGT----FEAVKNVFCDIPRGKVTALIGPSGC--GKSTV------LRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred CceEEEEeEEEEECC----EEEEcceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhccccccCCCCCceEEEEC
Confidence 345669999999864 4599999999988 999999 56665 679999987 699999999
Q ss_pred cccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC----cccCCccccCC
Q psy7365 116 DHDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP----HKRTSLANTLS 188 (601)
Q Consensus 116 g~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LS 188 (601)
|.++.. .....++.+||+||++.+|+ .||.||+.|+....+.+. ...+++.++++.+++. +..++++.+||
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS 156 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARINGYTG-DMDELVERSLRKAAVWDECKDKLNESGYSLS 156 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcCCcH-HHHHHHHHHHHHhCCcchhhhhhCCCcccCC
Confidence 998742 33456678999999999887 499999998776555432 3445677889998863 45788999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+++|||| +.+
T Consensus 157 ~G~~qrl~laral--------------------------------------~~~-------------------------- 172 (269)
T PRK14259 157 GGQQQRLCIARTI--------------------------------------AIE-------------------------- 172 (269)
T ss_pred HHHHHHHHHHHHH--------------------------------------hcC--------------------------
Confidence 9999999865432 233
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
|+++||||||+|||+.++..++++|+++. ++.|||++||+++++..+||++++|.+|+
T Consensus 173 ---------p~lllLDEPt~gLD~~~~~~l~~~l~~~~------~~~tiiivtH~~~~~~~~~d~i~~l~~~~ 230 (269)
T PRK14259 173 ---------PEVILMDEPCSALDPISTLKIEETMHELK------KNFTIVIVTHNMQQAVRVSDMTAFFNAEE 230 (269)
T ss_pred ---------CCEEEEcCCCccCCHHHHHHHHHHHHHHh------cCCEEEEEeCCHHHHHHhcCEEEEEeccc
Confidence 58999999999999999999999999872 36899999999999999999999999744
No 212
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.6e-35 Score=302.40 Aligned_cols=211 Identities=22% Similarity=0.286 Sum_probs=171.7
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEcccc----
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHD---- 118 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~---- 118 (601)
+..+++|++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~~----~~il~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~ 73 (258)
T PRK11701 6 LLSVRGLTKLYGP----RKGCRDVSFDLYPGEVLGIVGESGS--GKTTL------LNALSARLAPDAGEVHYRMRDGQLR 73 (258)
T ss_pred eEEEeeeEEEcCC----ceeeeeeeEEEeCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCEEEECCcccccc
Confidence 4569999999864 3599999999988 999999 56665 579999999999999999998
Q ss_pred -CCCc-hHH----hcccEEEEccCCC--CCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCCc-ccCCccccCC
Q psy7365 119 -IRTD-MTT----IRRSLGVCPQYNA--LFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIPH-KRTSLANTLS 188 (601)
Q Consensus 119 -~~~~-~~~----~~~~ig~v~Q~~~--~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS 188 (601)
+... ... .++.+||+||++. +++.+|+.+|+.+.....+. +..+.+.++.++++.+|+.+ ..++.+.+||
T Consensus 74 ~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS 153 (258)
T PRK11701 74 DLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFS 153 (258)
T ss_pred ccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCC
Confidence 6431 222 3557999999984 67788999999765433332 23345667889999999974 7889999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+++||+|+ .
T Consensus 154 ~Gq~qrl~laral~--------------------------------------~--------------------------- 168 (258)
T PRK11701 154 GGMQQRLQIARNLV--------------------------------------T--------------------------- 168 (258)
T ss_pred HHHHHHHHHHHHHh--------------------------------------c---------------------------
Confidence 99999998654332 2
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+|+++||||||+|||+.++..+++.|+++. +..|.|||++||+++++...||++++|.+|+++..+++
T Consensus 169 --------~p~llllDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~ 236 (258)
T PRK11701 169 --------HPRLVFMDEPTGGLDVSVQARLLDLLRGLV----RELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLT 236 (258)
T ss_pred --------CCCEEEEcCCcccCCHHHHHHHHHHHHHHH----HhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 258999999999999999999999999873 22489999999999999999999999999999876643
No 213
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-36 Score=284.82 Aligned_cols=213 Identities=23% Similarity=0.336 Sum_probs=186.3
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
.+...++||.|+||.+. +|++|||.-.. +|-||+ ||||+ .|||+=+..|++|.|.++|..+.
T Consensus 4 ~~~l~v~dlHK~~G~~e----VLKGvSL~A~~GdVisIIGsSGS--GKSTf------LRCiN~LE~P~~G~I~v~geei~ 71 (256)
T COG4598 4 ENALEVEDLHKRYGEHE----VLKGVSLQANAGDVISIIGSSGS--GKSTF------LRCINFLEKPSAGSIRVNGEEIR 71 (256)
T ss_pred ccceehhHHHhhcccch----hhcceeeecCCCCEEEEecCCCC--chhHH------HHHHHhhcCCCCceEEECCeEEE
Confidence 45566899999998876 99999999877 999999 56654 57999999999999999999773
Q ss_pred C--------------chHHhcccEEEEccCCCCCCCCCHHHHHHH-hHhhcCCChHHHHHHHHHHHHHcCCCcccCCccc
Q psy7365 121 T--------------DMTTIRRSLGVCPQYNALFDKLTVEEHMWF-YSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLAN 185 (601)
Q Consensus 121 ~--------------~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~ 185 (601)
. ....+|.++|+|||++.++.+|||.||+.- +....|+++.++.++++.+|+.+||.++.+.+|.
T Consensus 72 ~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~ 151 (256)
T COG4598 72 LKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYPA 151 (256)
T ss_pred eeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCcc
Confidence 1 123467789999999999999999999875 4467899999999999999999999999999999
Q ss_pred cCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHH
Q psy7365 186 TLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILV 265 (601)
Q Consensus 186 ~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 265 (601)
.||||||||++||||| .
T Consensus 152 ~LSGGQQQR~aIARaL--------------------------------------a------------------------- 168 (256)
T COG4598 152 HLSGGQQQRVAIARAL--------------------------------------A------------------------- 168 (256)
T ss_pred ccCchHHHHHHHHHHH--------------------------------------h-------------------------
Confidence 9999999999754422 1
Q ss_pred HHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 266 AVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 266 a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
..|+++++|||||+|||.-.-++.+.++++ .++|+|.+++||.|.|+.+....++++.+|.|-..
T Consensus 169 ----------meP~vmLFDEPTSALDPElVgEVLkv~~~L-----AeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~ 233 (256)
T COG4598 169 ----------MEPEVMLFDEPTSALDPELVGEVLKVMQDL-----AEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEE 233 (256)
T ss_pred ----------cCCceEeecCCcccCCHHHHHHHHHHHHHH-----HHhCCeEEEEeeehhHHHhhhhheEEeecceeccc
Confidence 136899999999999999999999999998 45799999999999999999999999999999888
Q ss_pred cCcc
Q psy7365 346 GSSV 349 (601)
Q Consensus 346 G~~~ 349 (601)
|++.
T Consensus 234 G~P~ 237 (256)
T COG4598 234 GPPE 237 (256)
T ss_pred CChH
Confidence 8764
No 214
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=306.39 Aligned_cols=211 Identities=21% Similarity=0.286 Sum_probs=173.0
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEE
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKI 114 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~ 114 (601)
+.++..+++|++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+.+ |++|+|.+
T Consensus 36 ~~~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~l~G~nGs--GKSTL------l~~L~Gl~~~~p~~~~~G~I~~ 103 (286)
T PRK14275 36 GKPHVVAKNFSIYYGE----FEAVKKVNADILSKYVTAIIGPSGC--GKSTF------LRAINRMNDLIPSCHTTGALMF 103 (286)
T ss_pred CceEEEEeeeEEEECC----EEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccccCCCCCCceEEEE
Confidence 5667779999999863 3499999999988 999999 56665 679999864 59999999
Q ss_pred ccccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCC-hHHHHHHHHHHHHHcCCC----cccCCcccc
Q psy7365 115 YDHDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVP-KDLAQLEISNMIGDLGIP----HKRTSLANT 186 (601)
Q Consensus 115 ~g~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~gl~----~~~~~~~~~ 186 (601)
+|.++.. .....++.+||+||++.+|+. ||.||+.|+....+.. ....+.++.++++.+|+. +..++++.+
T Consensus 104 ~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~ 182 (286)
T PRK14275 104 DGEDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALG 182 (286)
T ss_pred CCEEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhh
Confidence 9998743 222456789999999998875 9999999876555543 233456778899999873 567889999
Q ss_pred CChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHH
Q psy7365 187 LSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVA 266 (601)
Q Consensus 187 LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a 266 (601)
||||||||+++||+| +.+
T Consensus 183 LSgGq~qrv~LAraL--------------------------------------~~~------------------------ 200 (286)
T PRK14275 183 LSGGQQQRLCVARTL--------------------------------------AVE------------------------ 200 (286)
T ss_pred CCHHHHHHHHHHHHH--------------------------------------hcC------------------------
Confidence 999999999865433 233
Q ss_pred HHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 267 VTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 267 ~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|+++||||||+|||+.++..+++.|+++. .++|||++||+++++..+||++++|.+|++...+
T Consensus 201 -----------p~lllLDEPt~gLD~~~~~~l~~~L~~~~------~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g 263 (286)
T PRK14275 201 -----------PEILLLDEPTSALDPKATAKIEDLIQELR------GSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHA 263 (286)
T ss_pred -----------CCEEEEeCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 58999999999999999999999999872 2589999999999999999999999999998766
Q ss_pred Cc
Q psy7365 347 SS 348 (601)
Q Consensus 347 ~~ 348 (601)
+.
T Consensus 264 ~~ 265 (286)
T PRK14275 264 PT 265 (286)
T ss_pred CH
Confidence 53
No 215
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=300.89 Aligned_cols=208 Identities=22% Similarity=0.301 Sum_probs=171.5
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~ 117 (601)
...++|+++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~~~~~~G~i~~~g~ 71 (251)
T PRK14270 4 KMESKNLNLWYGE----KQALNDINLPIYENKITALIGPSGC--GKSTF------LRCLNRMNDLISNVKIEGEVLLDGK 71 (251)
T ss_pred EEEEEEeEEEECC----eeeeeceeEEEcCCCEEEEECCCCC--CHHHH------HHHHHhccCcccCCCCccEEEECCE
Confidence 3458999999863 4599999999988 999999 57665 6799999875 8999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC----cccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP----HKRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSg 189 (601)
++.. .....++.+||+||++.+|+ .|+.||+.|+....+. ...+...++.++++.+|+. +..++++.+|||
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~ 150 (251)
T PRK14270 72 NIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSG 150 (251)
T ss_pred ecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCH
Confidence 8853 22345678999999998887 8999999987665554 3345556788899999874 457889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++|+++ +.+
T Consensus 151 G~~qrv~laral--------------------------------------~~~--------------------------- 165 (251)
T PRK14270 151 GQQQRLCIARTI--------------------------------------AVK--------------------------- 165 (251)
T ss_pred HHHHHHHHHHHH--------------------------------------hcC---------------------------
Confidence 999999754332 222
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. ++.|+|++||+++++..+|||+++|.+|+++..+++
T Consensus 166 --------p~llllDEP~~~LD~~~~~~l~~~L~~~~------~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~ 230 (251)
T PRK14270 166 --------PDVILMDEPTSALDPISTLKIEDLMVELK------KEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKT 230 (251)
T ss_pred --------CCEEEEeCCcccCCHHHHHHHHHHHHHHH------hCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCH
Confidence 58999999999999999999999999872 258999999999999999999999999999877654
No 216
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=303.48 Aligned_cols=208 Identities=24% Similarity=0.313 Sum_probs=169.6
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g~ 117 (601)
+..+++|++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++ |++|+|.++|.
T Consensus 21 ~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~i~~~g~ 88 (268)
T PRK14248 21 ILEVKDLSIYYGE----KRAVNDISMDIEKHAVTALIGPSGC--GKSTF------LRSINRMNDLIPSARSEGEILYEGL 88 (268)
T ss_pred eEEEEEEEEEeCC----ceeeeceEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhcccccCCCCCceEEEECCE
Confidence 4569999999863 4599999999988 999999 56665 679999865 79999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCC-hHHHHHHHHHHHHHcCCC----cccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVP-KDLAQLEISNMIGDLGIP----HKRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSg 189 (601)
++.. .....++.+||+||++.+|+. |+.||+.++....+.. ....+.++.++++.+++. +..++++.+|||
T Consensus 89 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSg 167 (268)
T PRK14248 89 NILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSG 167 (268)
T ss_pred EcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCH
Confidence 8853 123456789999999998875 9999999875444332 223445677889999984 456889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+|+ .+
T Consensus 168 Gq~qrl~laral~--------------------------------------~~--------------------------- 182 (268)
T PRK14248 168 GQQQRLCIARTLA--------------------------------------MK--------------------------- 182 (268)
T ss_pred HHHHHHHHHHHHh--------------------------------------CC---------------------------
Confidence 9999998654322 22
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. ++.|||++||+++++..+|||+++|.+|+++..+..
T Consensus 183 --------p~lllLDEPt~~LD~~~~~~l~~~l~~~~------~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 247 (268)
T PRK14248 183 --------PAVLLLDEPASALDPISNAKIEELITELK------EEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQT 247 (268)
T ss_pred --------CCEEEEcCCCcccCHHHHHHHHHHHHHHh------cCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 258999999999999999999999999999877643
No 217
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=305.82 Aligned_cols=212 Identities=22% Similarity=0.308 Sum_probs=173.9
Q ss_pred CCccchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeE
Q psy7365 43 ASMGAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGT 111 (601)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~ 111 (601)
++++.++..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++ |++|+
T Consensus 33 ~~~~~~~l~i~~l~~~~~~----~~il~~is~~i~~Ge~~~I~G~nGs--GKSTL------l~~l~Gl~~~~~~~p~~G~ 100 (285)
T PRK14254 33 ASSGETVIEARDLNVFYGD----EQALDDVSMDIPENQVTAMIGPSGC--GKSTF------LRCINRMNDLIDAARVEGE 100 (285)
T ss_pred ccCCCceEEEEEEEEEECC----EeeEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhccCCcccCCCCceE
Confidence 4556777779999999864 3599999999988 999999 56665 579999987 69999
Q ss_pred EEEccccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC----cccCCcc
Q psy7365 112 AKIYDHDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP----HKRTSLA 184 (601)
Q Consensus 112 v~~~g~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~----~~~~~~~ 184 (601)
|.++|.++.. .....++.++|+||++.+|+. ||.||+.+.....+.+. ....++.++++.+|+. +..++++
T Consensus 101 I~i~G~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~ 178 (285)
T PRK14254 101 LTFRGKNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGYDG-DIDERVEESLRRAALWDEVKDQLDSSG 178 (285)
T ss_pred EEECCEEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCCcH-HHHHHHHHHHHHcCCCchhHHHHhCCc
Confidence 9999998742 233456789999999988875 99999998766555543 4456788999999985 4578899
Q ss_pred ccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhH
Q psy7365 185 NTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSIL 264 (601)
Q Consensus 185 ~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 264 (601)
.+||||||||+++||+| +.+
T Consensus 179 ~~LSgGe~qrv~LAraL--------------------------------------~~~---------------------- 198 (285)
T PRK14254 179 LDLSGGQQQRLCIARAI--------------------------------------APD---------------------- 198 (285)
T ss_pred ccCCHHHHHHHHHHHHH--------------------------------------HcC----------------------
Confidence 99999999999864432 232
Q ss_pred HHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEE-EecCCccc
Q psy7365 265 VAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIA-IIAAGKLQ 343 (601)
Q Consensus 265 ~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~-vL~~GkIv 343 (601)
|++|||||||+|||+.++..++++|+++. . +.|||++||+++++..+|||++ +|.+|+++
T Consensus 199 -------------p~lLLLDEPts~LD~~~~~~l~~~L~~~~-----~-~~tiii~tH~~~~i~~~~dri~v~l~~G~i~ 259 (285)
T PRK14254 199 -------------PEVILMDEPASALDPVATSKIEDLIEELA-----E-EYTVVIVTHNMQQAARISDKTAVFLTGGELV 259 (285)
T ss_pred -------------CCEEEEeCCCCCCCHHHHHHHHHHHHHHh-----c-CCEEEEEeCCHHHHHhhcCEEEEEeeCCEEE
Confidence 58999999999999999999999999872 2 4799999999999999999975 57999987
Q ss_pred cccC
Q psy7365 344 CCGS 347 (601)
Q Consensus 344 ~~G~ 347 (601)
..+.
T Consensus 260 ~~g~ 263 (285)
T PRK14254 260 EFDD 263 (285)
T ss_pred EeCC
Confidence 7654
No 218
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=305.64 Aligned_cols=218 Identities=22% Similarity=0.216 Sum_probs=173.2
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC--------eeEEEEcc
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS--------SGTAKIYD 116 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~--------~G~v~~~g 116 (601)
.++||++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|+ +|+|.++|
T Consensus 3 ~~~nl~~~~~~----~~il~~vsl~i~~Ge~~~l~G~nGs--GKSTL------l~~laG~~~p~~~~~~~~~~G~i~~~g 70 (272)
T PRK13547 3 TADHLHVARRH----RAILRDLSLRIEPGRVTALLGRNGA--GKSTL------LKALAGDLTGGGAPRGARVTGDVTLNG 70 (272)
T ss_pred EEEEEEEEECC----EeEEecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCcccccccCCceEEEECC
Confidence 47899999854 3599999999988 999999 56665 67999999998 99999999
Q ss_pred ccCCC-chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc----CCChHHHHHHHHHHHHHcCCCcccCCccccCChHH
Q psy7365 117 HDIRT-DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK----QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGM 191 (601)
Q Consensus 117 ~~~~~-~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~ 191 (601)
.++.. .....++.++|+||++.+++.+|+.||+.++.... +....+...++.++++.+|+.+..++++.+|||||
T Consensus 71 ~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~ 150 (272)
T PRK13547 71 EPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGE 150 (272)
T ss_pred EEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHH
Confidence 98753 33445667999999987666799999998754211 11123345568899999999999999999999999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+++.+ ..|
T Consensus 151 ~qrv~laral~~~------------------------------------~~~---------------------------- 166 (272)
T PRK13547 151 LARVQFARVLAQL------------------------------------WPP---------------------------- 166 (272)
T ss_pred HHHHHHHHHHhcc------------------------------------ccc----------------------------
Confidence 9999865544310 000
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+-+..+|++|||||||+|||+.++..++++|+++. +..|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 167 ~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (272)
T PRK13547 167 HDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLA----RDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHGAP 239 (272)
T ss_pred cccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHH----HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEecCH
Confidence 00012479999999999999999999999999873 22389999999999999999999999999999876653
No 219
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.4e-34 Score=347.16 Aligned_cols=135 Identities=22% Similarity=0.282 Sum_probs=117.0
Q ss_pred cCCCCCHHHHHHHhHHh---cCCChhHHHHHHHHHHHHcCCCcc-cccccCcCChHHHHHHHHHHHHh---CCCCEEEEE
Q psy7365 383 LNDRLTPREHLEFYSRV---RNLPSVLLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALL---GNTPLIFLD 455 (601)
Q Consensus 383 l~~~lTv~E~L~~~~~~---~g~~~~~~~~~~~~lLe~~~L~~~-~~~~~~~LSgGqkQRl~lA~AL~---~~P~lLlLD 455 (601)
.|...||.|+|.+...- +.....+..+++ ++|+.+||.+. .++++.+||||||||+.||++|+ .+|+++|||
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILD 837 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLD 837 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEe
Confidence 45678899998775431 122334455566 58899999876 79999999999999999999997 699999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEe------CCEEEEecCHHHHHH
Q psy7365 456 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV------NGQFTCLGSATHLKS 519 (601)
Q Consensus 456 EPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~------~G~iv~~G~~~~L~~ 519 (601)
|||+|||+.+++.++++|++++++|.|||++||+++++ .+||++++|. +|++++.|+++++..
T Consensus 838 EPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpeel~~ 906 (1809)
T PRK00635 838 EPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV-KVADYVLELGPEGGNLGGYLLASCSPEELIH 906 (1809)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEEEEeCCHHHHHh
Confidence 99999999999999999999988899999999999999 7999999996 799999999999865
No 220
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=299.15 Aligned_cols=207 Identities=22% Similarity=0.326 Sum_probs=170.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCC---CCC--CeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGM---LPV--SSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl---~~~--~~G~v~~~g~~ 118 (601)
..++++++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+ ++| ++|+|.++|.+
T Consensus 4 l~~~~~~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~Gl~~~~~~~~~~G~i~~~g~~ 71 (250)
T PRK14245 4 IDARDVNFWYGD----FHALKGISMEIEEKSVVAFIGPSGC--GKSTF------LRLFNRMNDLIPATRLEGEIRIDGRN 71 (250)
T ss_pred EEEEEEEEEECC----EeEEeeeeEEEeCCCEEEEECCCCC--CHHHH------HHHHhhhhcccCCCCCceEEEECCEe
Confidence 458999999864 4599999999988 999999 56665 5799997 565 59999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCC-hHHHHHHHHHHHHHcCCCc----ccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVP-KDLAQLEISNMIGDLGIPH----KRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~gl~~----~~~~~~~~LSgG 190 (601)
+.. .....++.+||+||++.+|+ .|+.||+.++....+.. .+....++.++++.+|+.+ ..++++.+||||
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G 150 (250)
T PRK14245 72 IYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGG 150 (250)
T ss_pred cccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHH
Confidence 853 22455678999999998886 69999999876555443 2345567889999999853 568899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+| +.+
T Consensus 151 ~~qrv~laral--------------------------------------~~~---------------------------- 164 (250)
T PRK14245 151 QQQRLCIARAM--------------------------------------AVS---------------------------- 164 (250)
T ss_pred HHHHHHHHHHH--------------------------------------hcC----------------------------
Confidence 99999865432 222
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|+++. +|+|||++||+++++..+|||+++|.+|+++..+..
T Consensus 165 -------p~lllLDEPt~~LD~~~~~~l~~~l~~~~------~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~ 229 (250)
T PRK14245 165 -------PSVLLMDEPASALDPISTAKVEELIHELK------KDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDT 229 (250)
T ss_pred -------CCEEEEeCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCH
Confidence 58999999999999999999999999872 368999999999999999999999999999877654
No 221
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-35 Score=301.58 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=180.9
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-C----CeeEEEEccccC
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-V----SSGTAKIYDHDI 119 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-~----~~G~v~~~g~~~ 119 (601)
.++||+..|...++...+|+||||++.+ +|-||| ||| |++ +.|+|++| | .+|+|.++|.++
T Consensus 3 ~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGs--GKS-----~~~-~aim~llp~~~~~i~~G~i~f~g~~l 74 (316)
T COG0444 3 EVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGS--GKS-----VLA-KAIMGLLPKPNARIVGGEILFDGKDL 74 (316)
T ss_pred eEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCC--CHH-----HHH-HHHHhccCCCCCeEeeeEEEECCccc
Confidence 4799999998877789999999999988 899999 455 455 47899998 4 689999999988
Q ss_pred CCchH----Hh-cccEEEEccCC--CCCCCCCHHHHHHHhHhhcC-C-ChHHHHHHHHHHHHHcCCCc---ccCCccccC
Q psy7365 120 RTDMT----TI-RRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQ-V-PKDLAQLEISNMIGDLGIPH---KRTSLANTL 187 (601)
Q Consensus 120 ~~~~~----~~-~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~-~-~~~~~~~~~~~~l~~~gl~~---~~~~~~~~L 187 (601)
..-.. .+ .+.|+++||+| .+.|-+||.+++.-....++ . .++++++++.++|+.+||++ ..+++|++|
T Consensus 75 ~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhel 154 (316)
T COG0444 75 LSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHEL 154 (316)
T ss_pred ccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCccc
Confidence 64221 23 35799999998 58999999999987766543 3 46778899999999999996 469999999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
||||+|||.|| ++++.+
T Consensus 155 SGGMrQRV~IA--------------------------------------mala~~------------------------- 171 (316)
T COG0444 155 SGGMRQRVMIA--------------------------------------MALALN------------------------- 171 (316)
T ss_pred CCcHHHHHHHH--------------------------------------HHHhCC-------------------------
Confidence 99999998642 223333
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|++||.||||++||...+.++.++|++++ ++.|.|+|++|||+..+..+||||+||.+|+++..|+
T Consensus 172 ----------P~LlIADEPTTALDvt~QaqIl~Ll~~l~----~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~ 237 (316)
T COG0444 172 ----------PKLLIADEPTTALDVTVQAQILDLLKELQ----REKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGP 237 (316)
T ss_pred ----------CCEEEeCCCcchhhHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCC
Confidence 59999999999999999999999999995 3469999999999999999999999999999999887
Q ss_pred cc
Q psy7365 348 SV 349 (601)
Q Consensus 348 ~~ 349 (601)
..
T Consensus 238 ~~ 239 (316)
T COG0444 238 VE 239 (316)
T ss_pred HH
Confidence 53
No 222
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=298.67 Aligned_cols=207 Identities=22% Similarity=0.309 Sum_probs=170.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC-----eeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS-----SGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~-----~G~v~~~g~~ 118 (601)
..+++|++.|++ ..+++|+||++.+ +||||+ ||||| .++|+|+++|+ +|+|.++|.+
T Consensus 5 l~~~~l~~~~~~----~~il~~~s~~i~~G~~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~v~~~g~~ 72 (251)
T PRK14249 5 IKIRGVNFFYHK----HQVLKNINMDFPERQITAIIGPSGC--GKSTL------LRALNRMNDIVSGARLEGAVLLDNEN 72 (251)
T ss_pred EEEEEEEEEECC----eeEecceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccCccccCCcccEEEECCEE
Confidence 348999999864 3599999999988 999999 56665 57999999997 6999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCCh-HHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPK-DLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
+.. .....++.+||+||++.+|+. |+.||+.|.....+... +....++.++++.+|+. +..++.+.+||||
T Consensus 73 ~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G 151 (251)
T PRK14249 73 IYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGG 151 (251)
T ss_pred ccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHH
Confidence 743 223457789999999998875 99999998766555432 33455677888888874 4578999999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+| +.+
T Consensus 152 q~qrv~laral--------------------------------------~~~---------------------------- 165 (251)
T PRK14249 152 QQQRLCIARVL--------------------------------------AIE---------------------------- 165 (251)
T ss_pred HHHHHHHHHHH--------------------------------------hcC----------------------------
Confidence 99999865432 222
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++ + +|+|||++||+++++..+||++++|.+|++...+++
T Consensus 166 -------p~lllLDEPt~~LD~~~~~~l~~~l~~~-----~-~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~ 230 (251)
T PRK14249 166 -------PEVILMDEPCSALDPVSTMRIEELMQEL-----K-QNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRT 230 (251)
T ss_pred -------CCEEEEeCCCccCCHHHHHHHHHHHHHH-----h-cCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCH
Confidence 5899999999999999999999999987 2 478999999999999999999999999998876654
No 223
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=329.15 Aligned_cols=216 Identities=21% Similarity=0.269 Sum_probs=174.5
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-CCeeEEEEcccc
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-VSSGTAKIYDHD 118 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-~~~G~v~~~g~~ 118 (601)
+..+..+++|++.|+.. ++..+++|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++|.+
T Consensus 256 ~~~~l~~~~l~~~~~~~-~~~~vl~~vsl~i~~Ge~~~l~G~NGs--GKSTL------lk~i~Gl~~~~~~G~i~~~g~~ 326 (506)
T PRK13549 256 GEVILEVRNLTAWDPVN-PHIKRVDDVSFSLRRGEILGIAGLVGA--GRTEL------VQCLFGAYPGRWEGEIFIDGKP 326 (506)
T ss_pred CCceEEEecCccccccc-cccccccceeeEEcCCcEEEEeCCCCC--CHHHH------HHHHhCCCCCCCCcEEEECCEE
Confidence 34456699999998421 234589999999988 999999 57665 679999998 599999999998
Q ss_pred CCCc--hHHhcccEEEEccCC---CCCCCCCHHHHHHHhHh--hcC---CChHHHHHHHHHHHHHcCCC-cccCCccccC
Q psy7365 119 IRTD--MTTIRRSLGVCPQYN---ALFDKLTVEEHMWFYSQ--LKQ---VPKDLAQLEISNMIGDLGIP-HKRTSLANTL 187 (601)
Q Consensus 119 ~~~~--~~~~~~~ig~v~Q~~---~~~~~~tv~e~l~~~~~--~~~---~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~L 187 (601)
+... ....++.+||+||++ .+|+++||.||+.++.. ..+ .+....+.++.++++.+|+. +..++++.+|
T Consensus 327 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~L 406 (506)
T PRK13549 327 VKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAIARL 406 (506)
T ss_pred CCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccccccC
Confidence 7532 233466799999996 47889999999987532 211 23344556788999999996 5789999999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
||||||||++||++ +.+
T Consensus 407 SgG~kqrv~lA~al--------------------------------------~~~------------------------- 423 (506)
T PRK13549 407 SGGNQQKAVLAKCL--------------------------------------LLN------------------------- 423 (506)
T ss_pred CHHHHHHHHHHHHH--------------------------------------hhC-------------------------
Confidence 99999999865432 222
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|++|||||||+|||+.+++.++++|.++. .+|+|||++|||++++..+||++++|.+|+++..++
T Consensus 424 ----------p~lllLDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~ 488 (506)
T PRK13549 424 ----------PKILILDEPTRGIDVGAKYEIYKLINQLV-----QQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLI 488 (506)
T ss_pred ----------CCEEEEcCCCCCcCHhHHHHHHHHHHHHH-----HCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEec
Confidence 58999999999999999999999999873 358999999999999999999999999999887664
Q ss_pred c
Q psy7365 348 S 348 (601)
Q Consensus 348 ~ 348 (601)
.
T Consensus 489 ~ 489 (506)
T PRK13549 489 N 489 (506)
T ss_pred c
Confidence 3
No 224
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=297.93 Aligned_cols=208 Identities=24% Similarity=0.343 Sum_probs=170.9
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~ 117 (601)
+..+++|++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 3 IIEIENFSAYYGE----KKAVKNVTMKIFKNQITAIIGPSGC--GKTTL------LRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred eEEEEeeEEEeCC----ceeEeeeeEeecCCCEEEEECCCCC--CHHHH------HHHHhccccCCCCCCcceEEEECCE
Confidence 3458999999863 3599999999988 999999 56665 6799999984 8999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCC-hHHHHHHHHHHHHHcCCCc----ccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVP-KDLAQLEISNMIGDLGIPH----KRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~gl~~----~~~~~~~~LSg 189 (601)
++.. .....++.++|+||++.+|+ .|++||+.++....+.. ....++++.++++.+|+.. ..++.+.+|||
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~ 149 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSG 149 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCH
Confidence 8753 12345678999999998887 89999999876554443 2344566788999999863 47889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+| +.+
T Consensus 150 Gq~qr~~la~al--------------------------------------~~~--------------------------- 164 (250)
T PRK14262 150 GQQQRLCIARAL--------------------------------------AVE--------------------------- 164 (250)
T ss_pred HHHHHHHHHHHH--------------------------------------hCC---------------------------
Confidence 999999754432 222
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|.++. +++|+|++||+++++..+||++++|.+|+++..++.
T Consensus 165 --------p~llllDEP~~~LD~~~~~~l~~~l~~~~------~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (250)
T PRK14262 165 --------PEVILLDEPTSALDPIATQRIEKLLEELS------ENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPT 229 (250)
T ss_pred --------CCEEEEeCCccccCHHHHHHHHHHHHHHh------cCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCH
Confidence 58999999999999999999999999872 368999999999999999999999999999877654
No 225
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=297.63 Aligned_cols=208 Identities=23% Similarity=0.316 Sum_probs=170.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC-----eeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS-----SGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~-----~G~v~~~g~~ 118 (601)
..++||++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++|+ +|+|.++|.+
T Consensus 5 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~~~~~~G~i~~~g~~ 72 (252)
T PRK14272 5 LSAQDVNIYYGD----KQAVKNVNLDVQRGTVNALIGPSGC--GKTTF------LRAINRMHDLTPGARVTGRILLDGQD 72 (252)
T ss_pred EEEeeeEEEECC----EEeeccceEEEcCCCEEEEECCCCC--CHHHH------HHHHhccCCCCcCCCCceeEEECCEE
Confidence 348999999863 4699999999988 999999 56665 57999999874 8999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCC-hHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVP-KDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
+.. .....++.+||+||++.+|+.+|+.||+.++....+.+ .++..+++.++++.+++. +..++++.+||||
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G 152 (252)
T PRK14272 73 IYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGG 152 (252)
T ss_pred cccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHH
Confidence 753 23345678999999999999999999998766544432 334456677778888763 4568899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+| +.+
T Consensus 153 ~~qrv~laral--------------------------------------~~~---------------------------- 166 (252)
T PRK14272 153 QQQRLCIARAL--------------------------------------AVE---------------------------- 166 (252)
T ss_pred HHHHHHHHHHH--------------------------------------hcC----------------------------
Confidence 99999854432 232
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+.+.|+++. +++|+|++||+++++..+||++++|.+|+++..+++
T Consensus 167 -------p~llllDEP~~~LD~~~~~~l~~~l~~~~------~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14272 167 -------PEILLMDEPTSALDPASTARIEDLMTDLK------KVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPT 231 (252)
T ss_pred -------CCEEEEeCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 368999999999999999999999999999877653
No 226
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.6e-35 Score=294.83 Aligned_cols=195 Identities=21% Similarity=0.280 Sum_probs=161.5
Q ss_pred eeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC----CeeEEEEccccCCCchHHhcccEEEEccCC
Q psy7365 68 GISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV----SSGTAKIYDHDIRTDMTTIRRSLGVCPQYN 137 (601)
Q Consensus 68 ~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~----~~G~v~~~g~~~~~~~~~~~~~ig~v~Q~~ 137 (601)
+++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|.++|+++... ...++.+||+||++
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~~~~~G~i~~~g~~~~~~-~~~~~~i~~~~q~~ 71 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGS--GKSLT------CLAILGLLPPGLTQTSGEILLDGRPLLPL-SIRGRHIATIMQNP 71 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCccCccccEEEECCEechhh-hhhhheeEEEecCc
Confidence 47899999988 999999 57665 6799999999 899999999987532 22345799999998
Q ss_pred C--CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC---cccCCccccCChHHHhhhhchhhhcchhhHHHHHH
Q psy7365 138 A--LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP---HKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVS 212 (601)
Q Consensus 138 ~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~ 212 (601)
. +++.+|+.||+.+.....+......+.++.++++.+|+. +..++.+.+||||||||+++||+|
T Consensus 72 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral----------- 140 (230)
T TIGR02770 72 RTAFNPLFTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALAL----------- 140 (230)
T ss_pred hhhcCcccCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHH-----------
Confidence 5 456789999998876555544445566789999999998 567899999999999999864432
Q ss_pred HhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCH
Q psy7365 213 FMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDP 292 (601)
Q Consensus 213 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~ 292 (601)
+.+ |+++||||||+|||+
T Consensus 141 ---------------------------~~~-----------------------------------p~vllLDEPt~~LD~ 158 (230)
T TIGR02770 141 ---------------------------LLE-----------------------------------PPFLIADEPTTDLDV 158 (230)
T ss_pred ---------------------------hcC-----------------------------------CCEEEEcCCccccCH
Confidence 232 589999999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 293 YSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 293 ~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
.++..+++.|+++. +..|+|||++||+++++..+||++++|.+|++...+++
T Consensus 159 ~~~~~l~~~l~~~~----~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 210 (230)
T TIGR02770 159 VNQARVLKLLRELR----QLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTV 210 (230)
T ss_pred HHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999873 22488999999999999999999999999999876654
No 227
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=300.32 Aligned_cols=208 Identities=23% Similarity=0.271 Sum_probs=171.8
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g~ 117 (601)
+..+++|++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++|.
T Consensus 20 ~l~~~nl~~~~~~----~~il~~vsl~i~~Ge~~~I~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~i~~~g~ 87 (267)
T PRK14237 20 ALSTKDLHVYYGK----KEAIKGIDMQFEKNKITALIGPSGS--GKSTY------LRSLNRMNDTIDIARVTGQILYRGI 87 (267)
T ss_pred EEEEeeEEEEECC----eeeEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhccCccCCCCcceEEEECCE
Confidence 3569999999853 4699999999988 999999 56665 579999996 58999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC----cccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP----HKRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSg 189 (601)
++.. .....++.+||+||++.+|+ .||.||+.++....+. +..+...++.++++.+++. +..++++.+|||
T Consensus 88 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~ 166 (267)
T PRK14237 88 DINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSG 166 (267)
T ss_pred EcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCH
Confidence 8743 23345778999999998887 6999999987654443 3344566788999999985 457889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||++ +.
T Consensus 167 G~~qrl~laral--------------------------------------~~---------------------------- 180 (267)
T PRK14237 167 GQQQRLCIARAI--------------------------------------AV---------------------------- 180 (267)
T ss_pred HHHHHHHHHHHH--------------------------------------hc----------------------------
Confidence 999999864432 22
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+|+++||||||+|||+.++..++++|.++. ++.|||++||+++++..+||++++|.+|+++..++.
T Consensus 181 -------~p~lllLDEPt~~LD~~~~~~l~~~l~~~~------~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~ 246 (267)
T PRK14237 181 -------KPDILLMDEPASALDPISTMQLEETMFELK------KNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKT 246 (267)
T ss_pred -------CCCEEEEeCCcccCCHHHHHHHHHHHHHHh------cCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 258999999999999999999999999872 368999999999999999999999999999877654
No 228
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=296.47 Aligned_cols=207 Identities=24% Similarity=0.329 Sum_probs=170.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~~ 118 (601)
..++++++.|++ ..+++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|.++|.+
T Consensus 4 l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~v~~~g~~ 71 (249)
T PRK14253 4 FNIENLDLFYGE----NQALKSINLPIPARQVTALIGPSGC--GKSTL------LRCLNRMNDLIEGVKITGKLTMDGED 71 (249)
T ss_pred EEEeccEEEECC----eeeeecceEEecCCCEEEEECCCCC--CHHHH------HHHHHhhcccccCCCCceEEEECCEE
Confidence 458999999863 4599999999988 999999 56665 5799999986 59999999998
Q ss_pred CCC--chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCC-hHHHHHHHHHHHHHcCCC----cccCCccccCChHH
Q psy7365 119 IRT--DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVP-KDLAQLEISNMIGDLGIP----HKRTSLANTLSGGM 191 (601)
Q Consensus 119 ~~~--~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG~ 191 (601)
+.. +....++.+||+||++.+|+ .||.||+.+.....+.. ....++++.++++.+|+. +..++++.+|||||
T Consensus 72 ~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~ 150 (249)
T PRK14253 72 IYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQ 150 (249)
T ss_pred cccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHH
Confidence 742 33456778999999999887 89999998875544443 334456778889999875 35678899999999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+| +.+
T Consensus 151 ~qrv~laral--------------------------------------~~~----------------------------- 163 (249)
T PRK14253 151 QQRLCIARTI--------------------------------------AME----------------------------- 163 (249)
T ss_pred HHHHHHHHHH--------------------------------------HcC-----------------------------
Confidence 9999865432 232
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. ++.|||++||+++++..+||++++|.+|+++..++.
T Consensus 164 ------p~llllDEP~~~LD~~~~~~l~~~l~~~~------~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~ 228 (249)
T PRK14253 164 ------PDVILMDEPTSALDPIATHKIEELMEELK------KNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDT 228 (249)
T ss_pred ------CCEEEEeCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 258999999999999999999999999999876643
No 229
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=297.23 Aligned_cols=207 Identities=25% Similarity=0.345 Sum_probs=170.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g~~ 118 (601)
+.++++++.|+. ..+++|+||++.+ +||||+ ||||| .++|+|+++ |++|+|.++|.+
T Consensus 5 l~~~~l~~~~~~----~~~l~~~sl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~p~~~~~G~v~i~g~~ 72 (251)
T PRK14251 5 ISAKDVHLSYGN----YEALHGISLDFEEKELTALIGPSGC--GKSTF------LRCLNRMNDDIENIKITGEIKFEGQN 72 (251)
T ss_pred EEEEeeEEEECC----eeeeeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhhccccccCCCcceEEEECCEE
Confidence 458999999863 4599999999988 999999 56665 579999997 489999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCC-hHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVP-KDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
+.. +....++.+||+||++.+|+ .||+||+.++....+.. .+..+.++.++++.+|+. ...++.+.+||||
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G 151 (251)
T PRK14251 73 IYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGG 151 (251)
T ss_pred cccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHH
Confidence 743 22345678999999998886 79999998876555543 333456778899999984 4568899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+|+ .
T Consensus 152 q~qr~~laral~--------------------------------------~----------------------------- 164 (251)
T PRK14251 152 QQQRICIARALA--------------------------------------V----------------------------- 164 (251)
T ss_pred HHHHHHHHHHHh--------------------------------------c-----------------------------
Confidence 999997544322 2
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+|+++||||||+|||+.+++.+++.|+++. ++.|||++||+++++..+||++++|.+|+++..++.
T Consensus 165 ------~p~llllDEP~~~LD~~~~~~l~~~l~~~~------~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~ 230 (251)
T PRK14251 165 ------RPKVVLLDEPTSALDPISSSEIEETLMELK------HQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPT 230 (251)
T ss_pred ------CCCEEEecCCCccCCHHHHHHHHHHHHHHH------cCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCH
Confidence 258999999999999999999999999872 368999999999999999999999999999876643
No 230
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=5.4e-35 Score=292.01 Aligned_cols=202 Identities=24% Similarity=0.327 Sum_probs=163.3
Q ss_pred hhcccccccccC--CC-ccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEcc--c--
Q psy7365 51 LFESLSENRDKL--GI-DSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYD--H-- 117 (601)
Q Consensus 51 ~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g--~-- 117 (601)
.++||++.|+.. +. ...+++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++| .
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~~~g~~~ 74 (224)
T TIGR02324 3 EVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGA--GKSTL------LKSLYANYLPDSGRILVRHEGAWV 74 (224)
T ss_pred EEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCeEEEecCCCcc
Confidence 478999998642 11 24699999999988 999999 56665 5799999999999999984 3
Q ss_pred cCCC-chH---H-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcc-cCCccccCChHH
Q psy7365 118 DIRT-DMT---T-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHK-RTSLANTLSGGM 191 (601)
Q Consensus 118 ~~~~-~~~---~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~ 191 (601)
++.. +.. . .++.+||+||++.+++.+||.||+.+.....+.......+++.++++.+|+.+. .++++.+|||||
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~ 154 (224)
T TIGR02324 75 DLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGE 154 (224)
T ss_pred chhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHH
Confidence 4422 111 1 245799999999999999999999886555555555556778899999999864 588999999999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||++ +.+
T Consensus 155 ~qrl~laral--------------------------------------~~~----------------------------- 167 (224)
T TIGR02324 155 QQRVNIARGF--------------------------------------IAD----------------------------- 167 (224)
T ss_pred HHHHHHHHHH--------------------------------------hcC-----------------------------
Confidence 9999754432 222
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA 338 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~ 338 (601)
|+++||||||+|||+.+++.+.+.|+++. .+|+|+|++||+.+++..+||+++.+.
T Consensus 168 ------p~llllDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 168 ------YPILLLDEPTASLDAANRQVVVELIAEAK-----ARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred ------CCEEEEcCCcccCCHHHHHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 58999999999999999999999999873 358999999999999999999998763
No 231
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-35 Score=297.13 Aligned_cols=206 Identities=22% Similarity=0.321 Sum_probs=168.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEccccC
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYDHDI 119 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g~~~ 119 (601)
.+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+.+ |++|+|+++|.++
T Consensus 7 ~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~I~G~nGs--GKSTL------l~~i~G~~~~~~~~~~~G~i~~~g~~i 74 (251)
T PRK14244 7 SVKNLNLWYGS----KQILFDINLDIYKREVTAFIGPSGC--GKSTF------LRCFNRMNDFVPNCKVKGELDIDGIDV 74 (251)
T ss_pred EeeeEEEEECC----eeeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhhcccCCCCCcceEEEECCEeh
Confidence 37899998853 4699999999988 999999 56665 579999986 4799999999887
Q ss_pred CC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC--ChHHHHHHHHHHHHHcCCCc----ccCCccccCChH
Q psy7365 120 RT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV--PKDLAQLEISNMIGDLGIPH----KRTSLANTLSGG 190 (601)
Q Consensus 120 ~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~----~~~~~~~~LSgG 190 (601)
.. ....+++.+||+||++.+|+. |+.||+.+.....+. .....+.++.++++.+|+.+ ..++.+.+||||
T Consensus 75 ~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G 153 (251)
T PRK14244 75 YSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGG 153 (251)
T ss_pred HhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHH
Confidence 43 122456789999999988876 999999887544443 23344566789999999965 467889999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||+| +.+
T Consensus 154 q~qrv~laral--------------------------------------~~~---------------------------- 167 (251)
T PRK14244 154 QQQRLCIARAI--------------------------------------AVK---------------------------- 167 (251)
T ss_pred HHHHHHHHHHH--------------------------------------hcC----------------------------
Confidence 99999754432 222
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|.++. +|+|||++||+++++..+||++++|.+|+++..+..
T Consensus 168 -------p~llllDEPt~~LD~~~~~~l~~~l~~~~------~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (251)
T PRK14244 168 -------PTMLLMDEPCSALDPVATNVIENLIQELK------KNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTT 232 (251)
T ss_pred -------CCEEEEeCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 379999999999999999999999999999876643
No 232
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.8e-35 Score=327.26 Aligned_cols=216 Identities=24% Similarity=0.337 Sum_probs=173.9
Q ss_pred chhhhhcccccccccC-CCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEc-ccc
Q psy7365 47 AYVSLFESLSENRDKL-GIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIY-DHD 118 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~-g~~ 118 (601)
..+..+++|++.|++. ++...+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++ |.+
T Consensus 277 ~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGs--GKSTL------l~~l~Gl~~p~~G~i~~~~g~~ 348 (520)
T TIGR03269 277 EPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGA--GKTTL------SKIIAGVLEPTSGEVNVRVGDE 348 (520)
T ss_pred CceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEEecCCc
Confidence 3456799999998542 1235699999999988 999999 56665 579999999999999996 643
Q ss_pred ---CCCc----hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-----ccCCcccc
Q psy7365 119 ---IRTD----MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-----KRTSLANT 186 (601)
Q Consensus 119 ---~~~~----~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----~~~~~~~~ 186 (601)
+... ....++.+||+||++.+|+.+||.||+.+.... +.+....+.++.++++.+||.+ ..++++.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~ 427 (520)
T TIGR03269 349 WVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGL-ELPDELARMKAVITLKMVGFDEEKAEEILDKYPDE 427 (520)
T ss_pred cccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHc-CCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhh
Confidence 2211 123456799999999999999999999876432 3444445567889999999975 57899999
Q ss_pred CChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHH
Q psy7365 187 LSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVA 266 (601)
Q Consensus 187 LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a 266 (601)
|||||||||++|||| +.+
T Consensus 428 LSgGq~qrv~laral--------------------------------------~~~------------------------ 445 (520)
T TIGR03269 428 LSEGERHRVALAQVL--------------------------------------IKE------------------------ 445 (520)
T ss_pred CCHHHHHHHHHHHHH--------------------------------------hcC------------------------
Confidence 999999999854432 232
Q ss_pred HHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 267 VTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 267 ~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|++|||||||+|||+.+++.++++|+++. +..|.|||++|||++++..+||++++|.+|+++..+
T Consensus 446 -----------p~lLllDEPt~~LD~~~~~~l~~~l~~l~----~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g 510 (520)
T TIGR03269 446 -----------PRIVILDEPTGTMDPITKVDVTHSILKAR----EEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIG 510 (520)
T ss_pred -----------CCEEEEeCCcccCCHHHHHHHHHHHHHHH----HHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 58999999999999999999999999873 234899999999999999999999999999988766
Q ss_pred Cc
Q psy7365 347 SS 348 (601)
Q Consensus 347 ~~ 348 (601)
++
T Consensus 511 ~~ 512 (520)
T TIGR03269 511 DP 512 (520)
T ss_pred CH
Confidence 43
No 233
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.1e-35 Score=292.96 Aligned_cols=197 Identities=21% Similarity=0.308 Sum_probs=162.0
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
++.+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 7 ~i~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~ 74 (225)
T PRK10247 7 LLQLQNVGYLAGD----AKILNNISFSLRAGEFKLITGPSGC--GKSTL------LKIVASLISPTSGTLLFEGEDISTL 74 (225)
T ss_pred eEEEeccEEeeCC----ceeeeccEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccCCCCCeEEECCEEcCcC
Confidence 3558999999853 4599999999988 999999 56665 579999999999999999998754
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhhhchhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
+....++.++|+||++.+|+ .|+.||+.+.....+... ...++.++++.+|+. ...++++.+|||||+||+++||+
T Consensus 75 ~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lara 151 (225)
T PRK10247 75 KPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQQP--DPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRN 151 (225)
T ss_pred CHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCCCh--HHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHH
Confidence 33445678999999998886 599999988654443322 235677899999996 57899999999999999986543
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
|+ .+ |++
T Consensus 152 l~--------------------------------------~~-----------------------------------p~l 158 (225)
T PRK10247 152 LQ--------------------------------------FM-----------------------------------PKV 158 (225)
T ss_pred Hh--------------------------------------cC-----------------------------------CCE
Confidence 32 22 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA 338 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~ 338 (601)
+||||||+|||+.++..+.+.|.++. +..|.|||++||+.+++. .||++++|+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tvii~sh~~~~~~-~~d~i~~l~ 211 (225)
T PRK10247 159 LLLDEITSALDESNKHNVNEIIHRYV----REQNIAVLWVTHDKDEIN-HADKVITLQ 211 (225)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEECChHHHH-hCCEEEEEe
Confidence 99999999999999999999999873 234889999999999986 699999995
No 234
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5.3e-35 Score=327.56 Aligned_cols=217 Identities=19% Similarity=0.255 Sum_probs=176.4
Q ss_pred cchhhhhcccccccccCC-------CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEE
Q psy7365 46 GAYVSLFESLSENRDKLG-------IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTA 112 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v 112 (601)
+..+..+++|++.|++.+ ++..+++|+||++.+ +||||| ||||| .++|+|++| ++|+|
T Consensus 272 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGs--GKSTL------lk~l~Gl~~-~~G~i 342 (529)
T PRK15134 272 ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGS--GKSTT------GLALLRLIN-SQGEI 342 (529)
T ss_pred CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCC--CHHHH------HHHHhCcCC-CCcEE
Confidence 344677999999985321 235699999999988 999999 57665 579999995 89999
Q ss_pred EEccccCCC-ch---HHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcC--CChHHHHHHHHHHHHHcCCC-cccCCc
Q psy7365 113 KIYDHDIRT-DM---TTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQ--VPKDLAQLEISNMIGDLGIP-HKRTSL 183 (601)
Q Consensus 113 ~~~g~~~~~-~~---~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~l~~~gl~-~~~~~~ 183 (601)
+++|+++.. +. ...++.+||+||++ .+|+.+||.||+.++...++ .+..+.+.++.++++.+||. ...+++
T Consensus 343 ~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 422 (529)
T PRK15134 343 WFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHRY 422 (529)
T ss_pred EECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhcC
Confidence 999998753 11 12356799999997 48889999999998754332 44445567788999999997 568999
Q ss_pred cccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchh
Q psy7365 184 ANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSI 263 (601)
Q Consensus 184 ~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 263 (601)
+.+|||||||||++||++ +.+
T Consensus 423 ~~~LSgG~~qrv~la~al--------------------------------------~~~--------------------- 443 (529)
T PRK15134 423 PAEFSGGQRQRIAIARAL--------------------------------------ILK--------------------- 443 (529)
T ss_pred CccCCHHHHHHHHHHHHH--------------------------------------hCC---------------------
Confidence 999999999999854432 232
Q ss_pred HHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccc
Q psy7365 264 LVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQ 343 (601)
Q Consensus 264 ~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv 343 (601)
|++|||||||+|||+.+++.++++|+++. +..|+|||++|||++++..+||++++|.+|+++
T Consensus 444 --------------p~llllDEPt~~LD~~~~~~l~~~l~~~~----~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 505 (529)
T PRK15134 444 --------------PSLIILDEPTSSLDKTVQAQILALLKSLQ----QKHQLAYLFISHDLHVVRALCHQVIVLRQGEVV 505 (529)
T ss_pred --------------CCEEEeeCCccccCHHHHHHHHHHHHHHH----HhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 58999999999999999999999999873 224899999999999999999999999999998
Q ss_pred cccCc
Q psy7365 344 CCGSS 348 (601)
Q Consensus 344 ~~G~~ 348 (601)
..+..
T Consensus 506 ~~~~~ 510 (529)
T PRK15134 506 EQGDC 510 (529)
T ss_pred EEcCH
Confidence 76643
No 235
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4e-35 Score=288.48 Aligned_cols=195 Identities=25% Similarity=0.345 Sum_probs=170.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++-..-+...++|+... +|+++++ +++.|+.++.|.++... ..++++|++||+.+||..+|
T Consensus 25 d~v~l~V~~Gei~~iiGgSG---sGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFsslt 101 (263)
T COG1127 25 DGVDLDVPRGEILAILGGSG---SGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLT 101 (263)
T ss_pred cCceeeecCCcEEEEECCCC---cCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccc
Confidence 88888888999999997522 4555443 45566666777665432 24688999999999999999
Q ss_pred HHHHHHHhHHhc-CCChhHHHHHHHHHHHHcCCCcc-cccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHH
Q psy7365 389 PREHLEFYSRVR-NLPSVLLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGAR 466 (601)
Q Consensus 389 v~E~L~~~~~~~-g~~~~~~~~~~~~lLe~~~L~~~-~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~ 466 (601)
|+||+.|..+-+ .++++..++.+..-|+.+||... .++.|.+|||||++|++||||++.+|+++++||||+||||.+.
T Consensus 102 V~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a 181 (263)
T COG1127 102 VFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISA 181 (263)
T ss_pred hhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchH
Confidence 999999976543 57778888889999999999876 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 467 RFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 467 ~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
..+-++|+++++. |.|++++|||++++..+|||++++.+|+|++.|+++++.+
T Consensus 182 ~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 182 GVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred HHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHh
Confidence 9999999999887 9999999999999999999999999999999999999975
No 236
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-35 Score=296.67 Aligned_cols=208 Identities=23% Similarity=0.300 Sum_probs=170.5
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC--C---CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP--V---SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~--~---~~G~v~~~g~ 117 (601)
++.++++++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++ | ++|+|.++|.
T Consensus 6 ~i~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~i~~~g~ 73 (253)
T PRK14261 6 ILSTKNLNLWYGE----KHALYDITISIPKNRVTALIGPSGC--GKSTL------LRCFNRMNDLIPGCRITGDILYNGE 73 (253)
T ss_pred eEEEeeeEEEECC----eeeeeeeEEEECCCcEEEEECCCCC--CHHHH------HHHHhccccCCCCCCcceEEEECCE
Confidence 4568999999863 4599999999988 999999 56665 579999976 3 5899999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC----cccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP----HKRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSg 189 (601)
++.. +....++.+||+||++.+|+. ||+||+.|.....+. +....+.++.++++.+++. ...++.+.+|||
T Consensus 74 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~ 152 (253)
T PRK14261 74 NIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSG 152 (253)
T ss_pred EccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCH
Confidence 8854 234556789999999998875 999999987665553 2334456778899999874 346889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+|+ .+
T Consensus 153 G~~qrv~laral~--------------------------------------~~--------------------------- 167 (253)
T PRK14261 153 GQQQRLCIARTLA--------------------------------------VN--------------------------- 167 (253)
T ss_pred HHHHHHHHHHHHh--------------------------------------cC---------------------------
Confidence 9999997654322 22
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++.|+++. +++|||++||+++++...||++++|.+|+++..++.
T Consensus 168 --------p~lllLDEP~~gLD~~~~~~l~~~l~~~~------~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~ 232 (253)
T PRK14261 168 --------PEVILMDEPCSALDPIATAKIEDLIEDLK------KEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKT 232 (253)
T ss_pred --------CCEEEEeCCcccCCHHHHHHHHHHHHHHh------hCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCH
Confidence 58999999999999999999999999872 258999999999999999999999999999876654
No 237
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.8e-35 Score=289.44 Aligned_cols=197 Identities=21% Similarity=0.277 Sum_probs=165.7
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
++..++++++.|++ ..+++++||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 10 ~~l~~~~l~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~i~~ 77 (214)
T PRK13543 10 PLLAAHALAFSRNE----EPVFGPLDFHVDAGEALLVQGDNGA--GKTTL------LRVLAGLLHVESGQIQIDGKTATR 77 (214)
T ss_pred ceEEEeeEEEecCC----ceeeecceEEECCCCEEEEEcCCCC--CHHHH------HHHHhCCCCCCCeeEEECCEEccc
Confidence 34568999999864 3499999999988 999999 56665 579999999999999999998753
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
. ..++.++|+||++.+++.+|+.||+.++....+.. ..+++.++++.+|+.+..++++.+||||||||+++||++
T Consensus 78 ~--~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~---~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral 152 (214)
T PRK13543 78 G--DRSRFMAYLGHLPGLKADLSTLENLHFLCGLHGRR---AKQMPGSALAIVGLAGYEDTLVRQLSAGQKKRLALARLW 152 (214)
T ss_pred h--hhhhceEEeecCcccccCCcHHHHHHHHHHhcCCc---HHHHHHHHHHHcCChhhccCChhhCCHHHHHHHHHHHHH
Confidence 2 23457999999999999999999998876544432 334577899999999889999999999999999865433
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+ .+ |+++
T Consensus 153 ~--------------------------------------~~-----------------------------------p~ll 159 (214)
T PRK13543 153 L--------------------------------------SP-----------------------------------APLW 159 (214)
T ss_pred h--------------------------------------cC-----------------------------------CCEE
Confidence 2 22 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecC
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAA 339 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~ 339 (601)
||||||++||+.+++.+++.|.++. .+|.|+|++||+++++..+||++++++.
T Consensus 160 llDEPt~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 160 LLDEPYANLDLEGITLVNRMISAHL-----RGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHH-----hCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999998873 3588999999999999999999999874
No 238
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=9.3e-35 Score=298.74 Aligned_cols=215 Identities=20% Similarity=0.231 Sum_probs=174.6
Q ss_pred hhhhcccccccccCC-----CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLG-----IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~ 117 (601)
++.+++|++.|+..+ ...++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~sG~i~~~g~ 74 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGC--GKSTL------ARLLVGLESPSQGNVSWRGE 74 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCE
Confidence 355899999986310 135799999999988 999999 56665 57999999999999999999
Q ss_pred cCCCc-h---HHhcccEEEEccCC--CCCCCCCHHHHHHHhHhh-cCCChHHHHHHHHHHHHHcCCC-cccCCccccCCh
Q psy7365 118 DIRTD-M---TTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQL-KQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~~-~---~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSg 189 (601)
++... . ...++.+||+||++ .+++..|+.+|+.+.... .+....+...++.++++.+|+. ...++.+.+|||
T Consensus 75 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~ 154 (268)
T PRK10419 75 PLAKLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSG 154 (268)
T ss_pred eccccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCCh
Confidence 87531 1 23567899999998 366789999999775432 2444455556789999999997 578999999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++|||| +++
T Consensus 155 Ge~qrl~laral--------------------------------------~~~--------------------------- 169 (268)
T PRK10419 155 GQLQRVCLARAL--------------------------------------AVE--------------------------- 169 (268)
T ss_pred HHHHHHHHHHHH--------------------------------------hcC---------------------------
Confidence 999999754432 233
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|||||||+|||+.++..+.+.|+++. +..|.|+|++||+++++..+||++++|.+|+++..++.
T Consensus 170 --------p~lllLDEPt~~LD~~~~~~~~~~l~~~~----~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 170 --------PKLLILDEAVSNLDLVLQAGVIRLLKKLQ----QQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred --------CCEEEEeCCCcccCHHHHHHHHHHHHHHH----HHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 58999999999999999999999999873 22489999999999999999999999999999877654
No 239
>KOG0927|consensus
Probab=100.00 E-value=5.3e-35 Score=313.08 Aligned_cols=367 Identities=22% Similarity=0.261 Sum_probs=244.4
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEc--cccCCCch
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIY--DHDIRTDM 123 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~--g~~~~~~~ 123 (601)
+++++++|- +.+.++|++||+.+ +||||| |||| + .++|.|-.+|..-++-+. .+.+....
T Consensus 78 ~~sls~s~~----g~~l~kd~~~El~~g~rygLiG~nG~--Gkst-----~-L~~i~~~e~P~p~~~d~y~ls~e~~ps~ 145 (614)
T KOG0927|consen 78 IESLSLSFH----GVELIKDVTLELNRGRRYGLIGPNGS--GKST-----F-LRAIAGREVPIPEHIDFYLLSREIEPSE 145 (614)
T ss_pred eeeeeeccC----CceeeeeeeEEecCCceEEEEcCCCC--cHhH-----H-HHHHhcCCCCCCcccchhhhcccCCCch
Confidence 788999874 35699999999977 999999 5655 4 468999888865444332 22222111
Q ss_pred H-Hhc----------ccEEEEccCCCCC-CC--CCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCC
Q psy7365 124 T-TIR----------RSLGVCPQYNALF-DK--LTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLS 188 (601)
Q Consensus 124 ~-~~~----------~~ig~v~Q~~~~~-~~--~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS 188 (601)
. .+. .++.+.-.+-..+ +. .--.+++ +.+.-.++.+....++.++|..+|.. +..++++..||
T Consensus 146 ~~av~~v~~~~~~e~~rle~~~E~l~~~~d~~~~~~l~~~--~~r~~~~d~~~~~~k~~~il~glgf~~~m~~k~~~~~S 223 (614)
T KOG0927|consen 146 KQAVQAVVMETDHERKRLEYLAEDLAQACDDKEKDELDEL--YERLDEMDNDTFEAKAAKILHGLGFLSEMQDKKVKDLS 223 (614)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhccchhhhHHHHH--HHHHHhhCchhHHHHHHHHHHhcCCCHhHHHHHhhccC
Confidence 1 111 1111111111111 11 0111111 11222244566677788888888854 67899999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||++.|+++||+||.
T Consensus 224 gGwrmR~aLAr~Lf~----------------------------------------------------------------- 238 (614)
T KOG0927|consen 224 GGWRMRAALARALFQ----------------------------------------------------------------- 238 (614)
T ss_pred chHHHHHHHHHHHhc-----------------------------------------------------------------
Confidence 999999886654432
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
.|++|+|||||++||+.+..++-+.|.+. ...++|+++|+-+++...|..|+-+..++.+..+++
T Consensus 239 --------kP~LLLLDEPtnhLDleA~~wLee~L~k~-------d~~~lVi~sh~QDfln~vCT~Ii~l~~kkl~~y~Gn 303 (614)
T KOG0927|consen 239 --------KPDLLLLDEPTNHLDLEAIVWLEEYLAKY-------DRIILVIVSHSQDFLNGVCTNIIHLDNKKLIYYEGN 303 (614)
T ss_pred --------CCCEEEecCCccCCCHHHHHHHHHHHHhc-------cCceEEEEecchhhhhhHhhhhheecccceeeecCC
Confidence 26999999999999999999999999875 122899999999999999999999998885433321
Q ss_pred cc-------------c-------------c----------------------------------------------cccc
Q psy7365 349 VF-------------L-------------K----------------------------------------------NSFA 356 (601)
Q Consensus 349 ~l-------------L-------------k----------------------------------------------~~~g 356 (601)
.. . + ...+
T Consensus 304 ydqy~~tr~E~~~~q~K~~~kqqk~i~~~K~~ia~~g~g~a~~~rka~s~~K~~~km~~~gL~ek~~~~k~l~~~f~~vg 383 (614)
T KOG0927|consen 304 YDQYVKTRSELEENQMKAYEKQQKQIAHMKDLIARFGHGSAKLGRKAQSKEKTLDKMEADGLTEKVVGEKVLSFRFPEVG 383 (614)
T ss_pred HHHHhhHHHHHhHHHHHHHHHHHhHHHHhhHHHHhhcccchhhhHHHhhhhhhHHHHhhccccccccCCceEEEEccccc
Confidence 00 0 0 0000
Q ss_pred -------------cccc----------cccccCCcc--------------------cccccccC-----------CCCcc
Q psy7365 357 -------------RGYY----------LSLDMKSAP--------------------QKSYIGYC-----------PQFDA 382 (601)
Q Consensus 357 -------------~g~~----------igld~~~~~--------------------~~~~ig~v-----------~Q~~~ 382 (601)
.+|. +|.|..+.. ....+|.| -|+..
T Consensus 384 ~~p~pvi~~~nv~F~y~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~~~~~y~Qh~~ 463 (614)
T KOG0927|consen 384 KIPPPVIMVQNVSFGYSDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHNKLPRYNQHLA 463 (614)
T ss_pred CCCCCeEEEeccccCCCCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccccchhhhhhhH
Confidence 0000 111110000 00112222 22211
Q ss_pred --cCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 383 --LNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 383 --l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
+.-+.++.|++ ...+ +.....+.+..+|.++||. +..+.++++||+|||+||.+|+.++..|.+|+|||||+
T Consensus 464 e~ldl~~s~le~~---~~~~--~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lLlLDEPtn 538 (614)
T KOG0927|consen 464 EQLDLDKSSLEFM---MPKF--PDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLLLLDEPTN 538 (614)
T ss_pred hhcCcchhHHHHH---HHhc--cccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEEEecCCCc
Confidence 11222333332 2222 2123346788999999998 67788999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEE-EEecCHHHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF-TCLGSATHLKSK 520 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~i-v~~G~~~~L~~~ 520 (601)
|||..+...+.+.|.++ ..+|+++|||+..+..++++|.+..+|.+ ...|+...-+..
T Consensus 539 hLDi~tid~laeaiNe~---~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk~~ 597 (614)
T KOG0927|consen 539 HLDIETIDALAEAINEF---PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYKEH 597 (614)
T ss_pred CCCchhHHHHHHHHhcc---CCceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHHHH
Confidence 99999999999999886 45899999999999999999999998876 567777655443
No 240
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=8.1e-35 Score=295.83 Aligned_cols=208 Identities=20% Similarity=0.298 Sum_probs=168.3
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
+++|++. .+++|+||++.+ +||||+ ||||| .++|+|++++ +|+|.++|.++.. ...
T Consensus 3 ~~~l~~~--------~~l~~vsl~i~~Gei~~l~G~nGs--GKSTL------l~~l~Gl~~~-~G~i~~~g~~i~~~~~~ 65 (248)
T PRK03695 3 LNDVAVS--------TRLGPLSAEVRAGEILHLVGPNGA--GKSTL------LARMAGLLPG-SGSIQFAGQPLEAWSAA 65 (248)
T ss_pred ccccchh--------ceecceEEEEcCCCEEEEECCCCC--CHHHH------HHHHcCCCCC-CeEEEECCEecCcCCHH
Confidence 6778874 289999999988 999999 56655 5799999965 9999999998854 333
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.+||+||++.+++.+|+.||+.++... +.+..+..+++.++++.+|+.+..++++.+||||||||+++|++++.+
T Consensus 66 ~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (248)
T PRK03695 66 ELARHRAYLSQQQTPPFAMPVFQYLTLHQPD-KTRTEAVASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQV 144 (248)
T ss_pred HHhhheEEecccCccCCCccHHHHHHhcCcc-CCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcc
Confidence 4556799999999888899999999886432 233444566788999999999889999999999999999865433220
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+ + ..+| +|+++|||
T Consensus 145 ~-----~----------------------------~~~p---------------------------------~p~llllD 158 (248)
T PRK03695 145 W-----P----------------------------DINP---------------------------------AGQLLLLD 158 (248)
T ss_pred c-----c----------------------------ccCC---------------------------------CCCEEEEc
Confidence 0 0 0011 25899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|||+|||+.++..+.++|+++. .+|+|||++||+++++..+||++++|.+|+++..++.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~-----~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELC-----QQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHH-----hCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999873 3589999999999999999999999999999877653
No 241
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1e-34 Score=295.95 Aligned_cols=206 Identities=20% Similarity=0.263 Sum_probs=168.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC----CeeEEEEccccC
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV----SSGTAKIYDHDI 119 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~----~~G~v~~~g~~~ 119 (601)
..+++|++.|+ ..+++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.++
T Consensus 5 l~~~~l~~~~~-----~~il~~vsl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~G~i~~~g~~i 71 (254)
T PRK10418 5 IELRNIALQAA-----QPLVHGVSLTLQRGRVLALVGGSGS--GKSLT------CAAALGILPAGVRQTAGRVLLDGKPV 71 (254)
T ss_pred EEEeCeEEEec-----cceecceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCCcCCEEEECCeec
Confidence 34899999972 3589999999988 999999 56665 6799999999 999999999988
Q ss_pred CCchHHhcccEEEEccCCC--CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc---ccCCccccCChHHHhh
Q psy7365 120 RTDMTTIRRSLGVCPQYNA--LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH---KRTSLANTLSGGMQRK 194 (601)
Q Consensus 120 ~~~~~~~~~~ig~v~Q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~---~~~~~~~~LSgG~~qr 194 (601)
.. ....++.+||+||++. +++..|+.+++.+.+...+.+.. ..++.++++.+|+.+ ..++.+.+||||||||
T Consensus 72 ~~-~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qr 148 (254)
T PRK10418 72 AP-CALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPAD--DATLTAALEAVGLENAARVLKLYPFEMSGGMLQR 148 (254)
T ss_pred cc-cccccceEEEEecCCccccCccccHHHHHHHHHHHcCCChH--HHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHH
Confidence 52 2223467999999985 34567999998776555554432 367889999999987 4689999999999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
+++|||+ +.+
T Consensus 149 v~laral--------------------------------------~~~-------------------------------- 158 (254)
T PRK10418 149 MMIALAL--------------------------------------LCE-------------------------------- 158 (254)
T ss_pred HHHHHHH--------------------------------------hcC--------------------------------
Confidence 9864432 233
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|||||||+|||+.+++.+++.|+++. +..|.|||++||+++++..+|||+++|.+|++...++.
T Consensus 159 ---p~lLlLDEPt~~LD~~~~~~l~~~L~~~~----~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~ 225 (254)
T PRK10418 159 ---APFIIADEPTTDLDVVAQARILDLLESIV----QKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDV 225 (254)
T ss_pred ---CCEEEEeCCCcccCHHHHHHHHHHHHHHH----HhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCH
Confidence 58999999999999999999999999873 22489999999999999999999999999998766543
No 242
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-35 Score=325.53 Aligned_cols=208 Identities=21% Similarity=0.301 Sum_probs=170.0
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
..+..+++|++.|+ .+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|+++.
T Consensus 263 ~~~l~~~~l~~~~~------~~l~~isl~i~~Ge~~~l~G~NGs--GKSTL------lk~i~Gl~~p~~G~I~~~g~~~~ 328 (510)
T PRK09700 263 ETVFEVRNVTSRDR------KKVRDISFSVCRGEILGFAGLVGS--GRTEL------MNCLFGVDKRAGGEIRLNGKDIS 328 (510)
T ss_pred CcEEEEeCccccCC------CcccceeEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCcCCCCeEEECCEECC
Confidence 34567999998642 279999999988 999999 56665 67999999999999999999875
Q ss_pred Cc--hHHhcccEEEEccCC---CCCCCCCHHHHHHHhHhhc--------CC-ChHHHHHHHHHHHHHcCCC-cccCCccc
Q psy7365 121 TD--MTTIRRSLGVCPQYN---ALFDKLTVEEHMWFYSQLK--------QV-PKDLAQLEISNMIGDLGIP-HKRTSLAN 185 (601)
Q Consensus 121 ~~--~~~~~~~ig~v~Q~~---~~~~~~tv~e~l~~~~~~~--------~~-~~~~~~~~~~~~l~~~gl~-~~~~~~~~ 185 (601)
.. ....++.+||+||++ .+|+++||.||+.++...+ +. +....+.++.++++.+|+. +..+++++
T Consensus 329 ~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 408 (510)
T PRK09700 329 PRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNIT 408 (510)
T ss_pred CCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccc
Confidence 32 234566899999984 5889999999998754321 21 2233345678999999997 78899999
Q ss_pred cCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHH
Q psy7365 186 TLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILV 265 (601)
Q Consensus 186 ~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 265 (601)
+|||||||||++||+| +.+
T Consensus 409 ~LSgGq~qrv~lAral--------------------------------------~~~----------------------- 427 (510)
T PRK09700 409 ELSGGNQQKVLISKWL--------------------------------------CCC----------------------- 427 (510)
T ss_pred cCChHHHHHHHHHHHH--------------------------------------hcC-----------------------
Confidence 9999999999865432 222
Q ss_pred HHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 266 AVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 266 a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|++|||||||+|||+.+++.++++|+++. .+|.|||++|||++++..+|||+++|.+|++...
T Consensus 428 ------------p~lLlLDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 490 (510)
T PRK09700 428 ------------PEVIIFDEPTRGIDVGAKAEIYKVMRQLA-----DDGKVILMVSSELPEIITVCDRIAVFCEGRLTQI 490 (510)
T ss_pred ------------CCEEEECCCCCCcCHHHHHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEE
Confidence 58999999999999999999999999873 3589999999999999999999999999998765
Q ss_pred c
Q psy7365 346 G 346 (601)
Q Consensus 346 G 346 (601)
+
T Consensus 491 ~ 491 (510)
T PRK09700 491 L 491 (510)
T ss_pred e
Confidence 4
No 243
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=298.33 Aligned_cols=208 Identities=25% Similarity=0.337 Sum_probs=171.3
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g~ 117 (601)
...++++++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++ |++|+|.++|.
T Consensus 25 ~l~~~nl~~~~~~----~~il~~vs~~i~~Ge~~~I~G~nGs--GKSTL------l~~laGl~~~~~~~~~~G~i~i~g~ 92 (272)
T PRK14236 25 ALEVRNLNLFYGD----KQALFDISMRIPKNRVTAFIGPSGC--GKSTL------LRCFNRMNDLVDNCRIEGEIRLDGQ 92 (272)
T ss_pred EEEEEEEEEEECC----eeEeeeEEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhcCCCccCCCCceEEEECCE
Confidence 4558999999863 3599999999988 999999 56665 679999988 48999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCC-hHHHHHHHHHHHHHcCCCc----ccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVP-KDLAQLEISNMIGDLGIPH----KRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~gl~~----~~~~~~~~LSg 189 (601)
++.. .....++.++|+||++.+|+. |+.||+.+.....+.. ++..++++.++++.+++.+ ..++.+.+|||
T Consensus 93 ~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~ 171 (272)
T PRK14236 93 NIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSG 171 (272)
T ss_pred ECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCH
Confidence 8753 233457789999999998886 9999998876555542 3334566888999999863 56889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+| +.+
T Consensus 172 Gq~qrv~laral--------------------------------------~~~--------------------------- 186 (272)
T PRK14236 172 GQQQRLVIARAI--------------------------------------AIE--------------------------- 186 (272)
T ss_pred HHHHHHHHHHHH--------------------------------------HCC---------------------------
Confidence 999999864432 232
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..++++|+++. ++.|+|++||+++++...||++++|.+|+++..++.
T Consensus 187 --------p~lllLDEPt~gLD~~~~~~l~~~L~~~~------~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 251 (272)
T PRK14236 187 --------PEVLLLDEPTSALDPISTLKIEELITELK------SKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDT 251 (272)
T ss_pred --------CCEEEEeCCcccCCHHHHHHHHHHHHHHH------hCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCH
Confidence 58999999999999999999999999872 268999999999999999999999999999876643
No 244
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5.2e-35 Score=325.46 Aligned_cols=213 Identities=23% Similarity=0.264 Sum_probs=172.5
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-CeeEEEEccccC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-SSGTAKIYDHDI 119 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-~~G~v~~~g~~~ 119 (601)
..+..++++++.|+.. ++..+++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|+++
T Consensus 255 ~~~l~~~~l~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~NGs--GKSTL------l~~l~G~~~p~~~G~i~~~g~~~ 325 (500)
T TIGR02633 255 DVILEARNLTCWDVIN-PHRKRVDDVSFSLRRGEILGVAGLVGA--GRTEL------VQALFGAYPGKFEGNVFINGKPV 325 (500)
T ss_pred CceEEEeCCccccccc-ccccccccceeEEeCCcEEEEeCCCCC--CHHHH------HHHHhCCCCCCCCeEEEECCEEC
Confidence 3456699999987321 124589999999988 999999 57665 6799999985 899999999987
Q ss_pred CC--chHHhcccEEEEccCC---CCCCCCCHHHHHHHhHh--hc---CCChHHHHHHHHHHHHHcCCCc-ccCCccccCC
Q psy7365 120 RT--DMTTIRRSLGVCPQYN---ALFDKLTVEEHMWFYSQ--LK---QVPKDLAQLEISNMIGDLGIPH-KRTSLANTLS 188 (601)
Q Consensus 120 ~~--~~~~~~~~ig~v~Q~~---~~~~~~tv~e~l~~~~~--~~---~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS 188 (601)
.. ....+++++||+||++ .+|+++||.||+.+... .. +.+....+.++.++++.+|+.. ..++++++||
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS 405 (500)
T TIGR02633 326 DIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLS 405 (500)
T ss_pred CCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCC
Confidence 53 2234567899999996 48999999999987532 11 2233444567889999999974 6899999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+++||++ +.+
T Consensus 406 gGqkqrv~la~al--------------------------------------~~~-------------------------- 421 (500)
T TIGR02633 406 GGNQQKAVLAKML--------------------------------------LTN-------------------------- 421 (500)
T ss_pred HHHHHHHHHHHHH--------------------------------------hhC--------------------------
Confidence 9999999864432 222
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|++|||||||+|||+.+++.++++|.++. .+|.|||++|||++++..+||++++|.+|+++...
T Consensus 422 ---------p~lllLDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~ 485 (500)
T TIGR02633 422 ---------PRVLILDEPTRGVDVGAKYEIYKLINQLA-----QEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDF 485 (500)
T ss_pred ---------CCEEEEcCCCCCcCHhHHHHHHHHHHHHH-----hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEE
Confidence 58999999999999999999999999873 35899999999999999999999999999987644
No 245
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.4e-34 Score=297.06 Aligned_cols=269 Identities=25% Similarity=0.384 Sum_probs=196.2
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC--cccccccccCCCCccc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS--APQKSYIGYCPQFDAL 383 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~--~~~~~~ig~v~Q~~~l 383 (601)
.+.+++ +++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.+||+||++.+
T Consensus 15 ~~~~~l---~~vsl~i~~Ge~~~l~G~NG---aGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~ 88 (303)
T TIGR01288 15 GDKVVV---NDLSFTIARGECFGLLGPNG---AGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVVPQFDNL 88 (303)
T ss_pred CCeEEE---cceeEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEEeccccC
Confidence 344555 89999999999999997522 45554432 333444444443321 1235679999999999
Q ss_pred CCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCH
Q psy7365 384 NDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDP 463 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~ 463 (601)
++.+|++||+.++...++.+..+..++++++++.++|.+..++++.+||||||||++||+||+++|++|||||||+|||+
T Consensus 89 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 168 (303)
T TIGR01288 89 DPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQLLILDEPTTGLDP 168 (303)
T ss_pred CcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99999999999876666655555556788899999999989999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceEEEEEecCCCchhHHHHH
Q psy7365 464 GARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYSVKVRCAEGRSADAQTYL 543 (601)
Q Consensus 464 ~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~l~i~~~~~~~~~~~~~l 543 (601)
.+++.++++|++++++|+|||++||++++++.+|||+++|++|++++.|+++++.........+.+... ..+......
T Consensus 169 ~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 246 (303)
T TIGR01288 169 HARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDEQIGCNVIEIYGG--DPDELRELI 246 (303)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhhcCCCeEEEEEcC--CHHHHHHHh
Confidence 999999999999987899999999999999999999999999999999999999766543333333322 112122211
Q ss_pred hhcCCCceeEEeeCcEEEEEEcCCcccHHHHHHHHHHccccCCCeeEEEecCCCCCCC
Q psy7365 544 SLNLPVADLVETHATQLQYRISGAVSDLGALFRTLESAKTEAGLIVDYSLSQTSLEDS 601 (601)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~i~~~~v~~~sLEdv 601 (601)
. +.....+..+..+.+... ....+...+.+. . ..++...++||||+
T Consensus 247 ~---~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~----~-~~~~~~~~~sLedi 292 (303)
T TIGR01288 247 R---PYARRIEVSGETLFCYAR----DPEQVRVQLRGR----T-DLRLLQRPPNLEDV 292 (303)
T ss_pred h---hccceeeeeCCEEEEEeC----CHHHHHHHHhcc----c-CceEEecCCCHHHH
Confidence 1 112222223344433222 234455555321 2 33678899999985
No 246
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=298.75 Aligned_cols=210 Identities=20% Similarity=0.305 Sum_probs=169.8
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEc
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIY 115 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~ 115 (601)
.++..+++|++.|+. ..+++|+||++.+ +||||+ ||||| .++|+|+++ |++|+|.++
T Consensus 22 ~~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~I~G~nGs--GKSTL------l~~i~Gl~~~~~~~~~~G~i~~~ 89 (271)
T PRK14238 22 KVVFDTQNLNLWYGE----DHALKNINLDIHENEVTAIIGPSGC--GKSTY------IKTLNRMVELVPSVKTTGKILYR 89 (271)
T ss_pred ceEEEEeeeEEEECC----cceeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhhccCCCCCCCceeEEEC
Confidence 345669999999863 3489999999988 999999 56665 579999997 699999999
Q ss_pred cccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCCh-HHHHHHHHHHHHHcC----CCcccCCccccC
Q psy7365 116 DHDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPK-DLAQLEISNMIGDLG----IPHKRTSLANTL 187 (601)
Q Consensus 116 g~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~g----l~~~~~~~~~~L 187 (601)
|.++.. ....+++.+||+||++.+|+ .|+.||+.++....+.+. ...+..+.++++.++ +.+..++++.+|
T Consensus 90 g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~L 168 (271)
T PRK14238 90 DQNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGL 168 (271)
T ss_pred CEEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccC
Confidence 998742 23445678999999998887 599999998765444432 233455678888875 445678899999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
|||||||+++||++ +.
T Consensus 169 SgGe~qrv~laraL--------------------------------------~~-------------------------- 184 (271)
T PRK14238 169 SGGQQQRLCIARCL--------------------------------------AI-------------------------- 184 (271)
T ss_pred CHHHHHHHHHHHHH--------------------------------------Hc--------------------------
Confidence 99999999754332 22
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+|+++||||||+|||+.++..+.+.|+++. +++|+|++||+++++..+||++++|.+|+++..++
T Consensus 185 ---------~p~lllLDEPt~~LD~~~~~~l~~~l~~~~------~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~ 249 (271)
T PRK14238 185 ---------EPDVILMDEPTSALDPISTLKVEELVQELK------KDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDD 249 (271)
T ss_pred ---------CCCEEEEeCCCCcCCHHHHHHHHHHHHHHH------cCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 258999999999999999999999999872 26899999999999999999999999999987665
Q ss_pred c
Q psy7365 348 S 348 (601)
Q Consensus 348 ~ 348 (601)
.
T Consensus 250 ~ 250 (271)
T PRK14238 250 T 250 (271)
T ss_pred H
Confidence 3
No 247
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=294.43 Aligned_cols=212 Identities=22% Similarity=0.316 Sum_probs=173.7
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEcc---
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYD--- 116 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g--- 116 (601)
..|+..+++++++|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|
T Consensus 7 ~~~~i~~~~~~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~iaG~~~~~~G~v~~~G~~~ 74 (257)
T PRK14246 7 AEDVFNISRLYLYIND----KAILKDITIKIPNNSIFGIMGPSGS--GKSTL------LKVLNRLIEIYDSKIKVDGKVL 74 (257)
T ss_pred hhhheeeeeEEEecCC----ceeEeceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCcCceeEcCEEE
Confidence 4566779999999864 4599999999988 999999 56655 5799999999997777665
Q ss_pred ---ccCCC-chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC----cccCCccccC
Q psy7365 117 ---HDIRT-DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP----HKRTSLANTL 187 (601)
Q Consensus 117 ---~~~~~-~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~----~~~~~~~~~L 187 (601)
.++.. .....++.++|+||++.+|+.+|+.||+.++....+. ++++.+.++.++++.+|+. +..++.+..|
T Consensus 75 ~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 154 (257)
T PRK14246 75 YFGKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQL 154 (257)
T ss_pred ECCcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccC
Confidence 44432 2334577899999999999999999999987654443 3445567788999999996 3568899999
Q ss_pred ChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHH
Q psy7365 188 SGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAV 267 (601)
Q Consensus 188 SgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~ 267 (601)
|||||||+++||+|+ .+
T Consensus 155 S~G~~qrl~laral~--------------------------------------~~------------------------- 171 (257)
T PRK14246 155 SGGQQQRLTIARALA--------------------------------------LK------------------------- 171 (257)
T ss_pred CHHHHHHHHHHHHHH--------------------------------------cC-------------------------
Confidence 999999998654432 22
Q ss_pred HHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 268 TVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 268 ~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.++..+++.|.+++ ++.|||++||+++++..+||++++|.+|++...++
T Consensus 172 ----------P~llllDEPt~~LD~~~~~~l~~~l~~~~------~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~ 235 (257)
T PRK14246 172 ----------PKVLLMDEPTSMIDIVNSQAIEKLITELK------NEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGS 235 (257)
T ss_pred ----------CCEEEEcCCCccCCHHHHHHHHHHHHHHh------cCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 58999999999999999999999999872 35899999999999999999999999999987765
Q ss_pred c
Q psy7365 348 S 348 (601)
Q Consensus 348 ~ 348 (601)
.
T Consensus 236 ~ 236 (257)
T PRK14246 236 S 236 (257)
T ss_pred H
Confidence 4
No 248
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=296.16 Aligned_cols=207 Identities=23% Similarity=0.337 Sum_probs=169.5
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~~ 118 (601)
..++++++.|+. ..+++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|.++|.+
T Consensus 8 l~~~~l~~~~~~----~~il~~isl~i~~Ge~~~l~G~nGs--GKSTL------lk~l~Gl~~~~~~~~~~G~i~~~g~~ 75 (259)
T PRK14260 8 IKVKDLSFYYNT----SKAIEGISMDIYRNKVTAIIGPSGC--GKSTF------IKTLNRISELEGPVKVEGVVDFFGQN 75 (259)
T ss_pred EEEEEEEEEECC----eEeecceEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhhcCcccCCccceEEEECCEe
Confidence 458999999863 3599999999988 999999 56665 6799999985 58999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcC-CChHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQ-VPKDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
+.. .....++.+||+||++.+|+ .|++||+.++....+ .+......++.++++.+|+. +..++++.+||||
T Consensus 76 i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G 154 (259)
T PRK14260 76 IYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGG 154 (259)
T ss_pred ccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHH
Confidence 743 22345678999999999887 899999988765443 23444556778899999984 4678899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++|||| +.+
T Consensus 155 ~~qrv~laral--------------------------------------~~~---------------------------- 168 (259)
T PRK14260 155 QQQRLCIARAL--------------------------------------AIK---------------------------- 168 (259)
T ss_pred HHHHHHHHHHH--------------------------------------hcC----------------------------
Confidence 99999754432 222
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec-----CCccccc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA-----AGKLQCC 345 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~-----~GkIv~~ 345 (601)
|+++||||||+|||+.++..+++.|+++. +++|||++||+++++..+||++++|. +|+++..
T Consensus 169 -------p~lllLDEPt~~LD~~~~~~l~~~l~~~~------~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 169 -------PKVLLMDEPCSALDPIATMKVEELIHSLR------SELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred -------CCEEEEcCCCccCCHHHHHHHHHHHHHHh------cCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 58999999999999999999999999872 25899999999999999999999997 5998877
Q ss_pred cCc
Q psy7365 346 GSS 348 (601)
Q Consensus 346 G~~ 348 (601)
+.+
T Consensus 236 ~~~ 238 (259)
T PRK14260 236 GVT 238 (259)
T ss_pred CCH
Confidence 654
No 249
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=9.4e-35 Score=286.14 Aligned_cols=191 Identities=23% Similarity=0.274 Sum_probs=161.3
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+++|++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 2 ~i~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 69 (201)
T cd03231 2 EADELTCERDG----RALFSGLSFTLAAGEALQVTGPNGS--GKTTL------LRILAGLSPPLAGRVLLNGGPLDFQRD 69 (201)
T ss_pred EEEEEEEEeCC----ceeeccceEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEecccccH
Confidence 36899999854 3589999999988 999999 56655 579999999999999999998754334
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..+++++|+||++.+++.+|+.||+.++.... ..+++.++++.+|+.+..++++.+||||||||+++||++
T Consensus 70 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~------~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral--- 140 (201)
T cd03231 70 SIARGLLYLGHAPGIKTTLSVLENLRFWHADH------SDEQVEEALARVGLNGFEDRPVAQLSAGQQRRVALARLL--- 140 (201)
T ss_pred HhhhheEEeccccccCCCcCHHHHHHhhcccc------cHHHHHHHHHHcCChhhhcCchhhCCHHHHHHHHHHHHH---
Confidence 56778999999999999999999998854211 235678899999999888999999999999999754432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 141 -----------------------------------~~~-----------------------------------p~llllD 150 (201)
T cd03231 141 -----------------------------------LSG-----------------------------------RPLWILD 150 (201)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEe
Confidence 233 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEe
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAII 337 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL 337 (601)
|||+|||+.+++.+++.|+++. .+|.|+|++||+..+....|++++.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~-----~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 151 EPTTALDKAGVARFAEAMAGHC-----ARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred CCCCCCCHHHHHHHHHHHHHHH-----hCCCEEEEEecCchhhhhccceeEec
Confidence 9999999999999999998862 35889999999999999999999876
No 250
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.4e-34 Score=294.33 Aligned_cols=209 Identities=24% Similarity=0.318 Sum_probs=167.5
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEcccc-----
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHD----- 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~----- 118 (601)
..++++++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.+
T Consensus 4 l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~ 71 (253)
T TIGR02323 4 LQVSGLSKSYGG----GKGCRDVSFDLYPGEVLGIVGESGS--GKSTL------LGCLAGRLAPDHGTATYIMRSGAELE 71 (253)
T ss_pred EEEeeeEEEeCC----ceEeecceEEEeCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEEecccccccc
Confidence 458999999864 3489999999988 999999 56665 579999999999999999987
Q ss_pred CCC-chH----HhcccEEEEccCCC--CCCCCCHHHHHHHhHhhcC-CChHHHHHHHHHHHHHcCCC-cccCCccccCCh
Q psy7365 119 IRT-DMT----TIRRSLGVCPQYNA--LFDKLTVEEHMWFYSQLKQ-VPKDLAQLEISNMIGDLGIP-HKRTSLANTLSG 189 (601)
Q Consensus 119 ~~~-~~~----~~~~~ig~v~Q~~~--~~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSg 189 (601)
+.. ... ..++.+||+||++. +++..++.+|+.+.....+ ........++.++++.+|+. ...++.+.+|||
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSg 151 (253)
T TIGR02323 72 LYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSG 151 (253)
T ss_pred cccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCH
Confidence 532 221 12457999999985 4566799999976432222 12223456788999999997 478999999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+| +.+
T Consensus 152 G~~qrv~laral--------------------------------------~~~--------------------------- 166 (253)
T TIGR02323 152 GMQQRLQIARNL--------------------------------------VTR--------------------------- 166 (253)
T ss_pred HHHHHHHHHHHH--------------------------------------hcC---------------------------
Confidence 999999865432 222
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.+++.++++|.++. +..|.|+|++||+++++...||++++|.+|+++..+.
T Consensus 167 --------p~vlllDEP~~~LD~~~~~~l~~~l~~~~----~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~ 232 (253)
T TIGR02323 167 --------PRLVFMDEPTGGLDVSVQARLLDLLRGLV----RDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGL 232 (253)
T ss_pred --------CCEEEEcCCCccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECC
Confidence 58999999999999999999999999863 2348999999999999999999999999999877654
No 251
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=295.76 Aligned_cols=209 Identities=23% Similarity=0.323 Sum_probs=171.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC-----eeEEEEcccc
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS-----SGTAKIYDHD 118 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~-----~G~v~~~g~~ 118 (601)
..++++++.|+.. .+++|+||++.+ +||||| ||||| .++|+|+++|+ +|+|.++|.+
T Consensus 8 l~~~nl~~~~~~~----~il~~is~~i~~Ge~~~I~G~nGs--GKSTL------l~~l~Gl~~~~g~i~~~G~i~~~g~~ 75 (261)
T PRK14258 8 IKVNNLSFYYDTQ----KILEGVSMEIYQSKVTAIIGPSGC--GKSTF------LKCLNRMNELESEVRVEGRVEFFNQN 75 (261)
T ss_pred EEEeeEEEEeCCe----eEeeceEEEEcCCcEEEEECCCCC--CHHHH------HHHHhcccCCCCCccccceEEECCEE
Confidence 4589999998642 489999999988 999999 56665 67999999985 8999999998
Q ss_pred CCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 119 IRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 119 ~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
+.. ....+++.++|+||++.+|+ .|+.||+.+.....+. +..+...++.++++.+|+. +..++.+.+||||
T Consensus 76 i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG 154 (261)
T PRK14258 76 IYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGG 154 (261)
T ss_pred hhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHH
Confidence 732 22345778999999998887 8999999887655444 3334456778899999975 3568899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
|+||+++||+| +.+
T Consensus 155 q~qrv~laral--------------------------------------~~~---------------------------- 168 (261)
T PRK14258 155 QQQRLCIARAL--------------------------------------AVK---------------------------- 168 (261)
T ss_pred HHHHHHHHHHH--------------------------------------hcC----------------------------
Confidence 99999865432 222
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecC-----Cccccc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAA-----GKLQCC 345 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~-----GkIv~~ 345 (601)
|+++||||||+|||+.++..+++.|+++. ...|.|+|++||+++++..+||++++|.+ |+++..
T Consensus 169 -------p~vllLDEP~~~LD~~~~~~l~~~l~~l~----~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 237 (261)
T PRK14258 169 -------PKVLLMDEPCFGLDPIASMKVESLIQSLR----LRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEF 237 (261)
T ss_pred -------CCEEEEeCCCccCCHHHHHHHHHHHHHHH----HhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEe
Confidence 58999999999999999999999999873 22489999999999999999999999998 888776
Q ss_pred cCc
Q psy7365 346 GSS 348 (601)
Q Consensus 346 G~~ 348 (601)
+++
T Consensus 238 ~~~ 240 (261)
T PRK14258 238 GLT 240 (261)
T ss_pred CCH
Confidence 654
No 252
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=297.17 Aligned_cols=208 Identities=21% Similarity=0.272 Sum_probs=167.7
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEcc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYD 116 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g 116 (601)
++..+++|++.|+. .++++|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~~----~~il~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 9 TVLRTENLNVYYGS----FLAVKNVWLDIPKNQITAFIGPSGC--GKSTI------LRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred eEEEEeeeEEEECC----EEEeecceEEEcCCCEEEEECCCCC--CHHHH------HHHHHhhhcccCCCCCceEEEECC
Confidence 35669999999863 3599999999988 999999 56665 579999986 4899999999
Q ss_pred ccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC----cccCCccccCCh
Q psy7365 117 HDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP----HKRTSLANTLSG 189 (601)
Q Consensus 117 ~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSg 189 (601)
.++.. .....++.+||+||++.+|+ .|+.||+.++....+.. ....+++.++++.+++. +..++.+.+|||
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSg 154 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARINGYK-GDMDELVERSLRQAALWDEVKDKLKQSGLSLSG 154 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcCcc-hHHHHHHHHHHHHhCchhhHHHHhcCCcccCCH
Confidence 98742 23455778999999998887 59999999876544432 23345677788888874 356889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+| +.+
T Consensus 155 Gq~qrv~laral--------------------------------------~~~--------------------------- 169 (264)
T PRK14243 155 GQQQRLCIARAI--------------------------------------AVQ--------------------------- 169 (264)
T ss_pred HHHHHHHHHHHH--------------------------------------hcC---------------------------
Confidence 999999865432 222
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec---------CC
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA---------AG 340 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~---------~G 340 (601)
|+++||||||+|||+.++..++++|.++. +++|||++||+++++..+|||+++|. +|
T Consensus 170 --------p~lllLDEPt~~LD~~~~~~l~~~L~~~~------~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g 235 (264)
T PRK14243 170 --------PEVILMDEPCSALDPISTLRIEELMHELK------EQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYG 235 (264)
T ss_pred --------CCEEEEeCCCccCCHHHHHHHHHHHHHHh------cCCEEEEEecCHHHHHHhCCEEEEEecccccccccCc
Confidence 58999999999999999999999999872 24799999999999999999999998 67
Q ss_pred ccccccCc
Q psy7365 341 KLQCCGSS 348 (601)
Q Consensus 341 kIv~~G~~ 348 (601)
+++..++.
T Consensus 236 ~i~~~~~~ 243 (264)
T PRK14243 236 YLVEFDRT 243 (264)
T ss_pred eEEEeCCH
Confidence 77766543
No 253
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.7e-35 Score=294.27 Aligned_cols=205 Identities=25% Similarity=0.378 Sum_probs=161.5
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.++++++.|+.. ..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +.
T Consensus 2 ~~~~l~~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~~ 71 (237)
T cd03252 2 TFEHVRFRYKPD--GPVILDNISLRIKPGEVVGIVGRSGS--GKSTL------TKLIQRFYVPENGRVLVDGHDLALADP 71 (237)
T ss_pred EEEEEEEecCCC--CccceeceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCcCCCCCEEEECCeehHhcCH
Confidence 378999998532 24699999999988 999999 56665 679999999999999999998753 23
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHH-----HHHHHHHHc--CCCcccCCccccCChHHHhhhh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQL-----EISNMIGDL--GIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
...++.+||+||++.+|+ .||.||+.++.. +........ .+.++++.+ ++....++++.+||||||||++
T Consensus 72 ~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~ 148 (237)
T cd03252 72 AWLRRQVGVVLQENVLFN-RSIRDNIALADP--GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIA 148 (237)
T ss_pred HHHhhcEEEEcCCchhcc-chHHHHhhccCC--CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHH
Confidence 445678999999998774 799999987542 222222111 234555665 6666678899999999999997
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+||++ +.
T Consensus 149 laral--------------------------------------~~----------------------------------- 155 (237)
T cd03252 149 IARAL--------------------------------------IH----------------------------------- 155 (237)
T ss_pred HHHHH--------------------------------------hh-----------------------------------
Confidence 54432 22
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+|+++||||||+|||+.++..+++.|+++ . +|+|||++||+++++. .||++++|.+|+++..++.
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~~-----~-~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~~~~ 220 (237)
T cd03252 156 NPRILIFDEATSALDYESEHAIMRNMHDI-----C-AGRTVIIIAHRLSTVK-NADRIIVMEKGRIVEQGSH 220 (237)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHh-----c-CCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEEcCH
Confidence 25899999999999999999999999987 2 3899999999999985 6999999999999876643
No 254
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=297.99 Aligned_cols=209 Identities=23% Similarity=0.273 Sum_probs=171.8
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEcc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYD 116 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g 116 (601)
++..+++|++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|.++|
T Consensus 20 ~~l~i~nl~~~~~~----~~il~~vs~~i~~Ge~~~I~G~nGs--GKSTL------l~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 20 PAMAAVNLTLGFAG----KTVLDQVSMGFPARAVTSLMGPTGS--GKTTF------LRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred cEEEEeeEEEEECC----EEEeeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhccCCcCCCCCCceEEEECC
Confidence 35569999999863 4699999999988 999999 56665 5799999986 799999999
Q ss_pred ccCCCc--hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcC-CChHHHHHHHHHHHHHcCCCc----ccCCccccCCh
Q psy7365 117 HDIRTD--MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQ-VPKDLAQLEISNMIGDLGIPH----KRTSLANTLSG 189 (601)
Q Consensus 117 ~~~~~~--~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~----~~~~~~~~LSg 189 (601)
.++... ....++.++|+||++.+|+ .|+.||+.++....+ .+..+.+.++.++++.+|+.. ..++.+.+|||
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSg 166 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSG 166 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCH
Confidence 987532 2345778999999999887 899999988654333 344455566788999999974 46788999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
||+||+++||+| +.+
T Consensus 167 Gq~qrl~LAral--------------------------------------~~~--------------------------- 181 (276)
T PRK14271 167 GQQQLLCLARTL--------------------------------------AVN--------------------------- 181 (276)
T ss_pred HHHHHHHHHHHH--------------------------------------hcC---------------------------
Confidence 999999754432 222
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.+++.+.+.|+++. . +.|||++||+++++..+|||+++|.+|+++..++.
T Consensus 182 --------p~lllLDEPt~~LD~~~~~~l~~~L~~~~-----~-~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~ 246 (276)
T PRK14271 182 --------PEVLLLDEPTSALDPTTTEKIEEFIRSLA-----D-RLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPT 246 (276)
T ss_pred --------CCEEEEcCCcccCCHHHHHHHHHHHHHHh-----c-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 2 47999999999999999999999999998876653
No 255
>KOG0062|consensus
Probab=100.00 E-value=1.1e-34 Score=309.17 Aligned_cols=350 Identities=19% Similarity=0.254 Sum_probs=232.7
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+++.+..|| ++.-|++.+|.... +||||| ||||| +|+|+- |.|.....+ .+
T Consensus 83 ~~~fdLa~G----~k~LL~~a~L~L~~GrRYGLvGrNG~--GKsTL------LRaia~------~~v~~f~ve-----qE 139 (582)
T KOG0062|consen 83 IDNFDLAYG----GKILLNKANLTLSRGRRYGLVGRNGI--GKSTL------LRAIAN------GQVSGFHVE-----QE 139 (582)
T ss_pred eeeeeeeec----chhhhcCCceeeecccccceeCCCCC--cHHHH------HHHHHh------cCcCccCch-----hh
Confidence 455555554 44578899998877 999999 56665 567765 444333221 00
Q ss_pred hcccEEEEccCC-CCCCCCCHHHHHHHhHhh-cCCChHHHHHHHHHHHHHcCCCcc-cCCccccCChHHHhhhhchhhhc
Q psy7365 126 IRRSLGVCPQYN-ALFDKLTVEEHMWFYSQL-KQVPKDLAQLEISNMIGDLGIPHK-RTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 126 ~~~~ig~v~Q~~-~~~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
.+. -+++=.- .+-.++.+.+-+.--.++ .+...+ +...++|..+|.++. ..+++++||||-|.|+++|||+|
T Consensus 140 ~~g--~~t~~~~~~l~~D~~~~dfl~~e~~l~~~~~l~---ei~~~~L~glGFt~emq~~pt~slSGGWrMrlaLARAlf 214 (582)
T KOG0062|consen 140 VRG--DDTEALQSVLESDTERLDFLAEEKELLAGLTLE---EIYDKILAGLGFTPEMQLQPTKSLSGGWRMRLALARALF 214 (582)
T ss_pred eec--cchHHHhhhhhccHHHHHHHHhhhhhhccchHH---HHHHHHHHhCCCCHHHHhccccccCcchhhHHHHHHHHh
Confidence 110 0111100 122233333322211111 111222 222338999999854 67889999999999998766544
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
.+ |++|+
T Consensus 215 ~~-------------------------------------------------------------------------pDlLL 221 (582)
T KOG0062|consen 215 AK-------------------------------------------------------------------------PDLLL 221 (582)
T ss_pred cC-------------------------------------------------------------------------CCEEe
Confidence 33 69999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC---------------
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS--------------- 347 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~--------------- 347 (601)
|||||+.||..+..++-+.|..+ +.|+|+||||-.|+...|.-|+-+.+-++-..-.
T Consensus 222 LDEPTNhLDv~av~WLe~yL~t~--------~~T~liVSHDr~FLn~V~tdIIH~~~~kL~~YkGN~~~Fvk~k~E~~~n 293 (582)
T KOG0062|consen 222 LDEPTNHLDVVAVAWLENYLQTW--------KITSLIVSHDRNFLNTVCTDIIHLENLKLDYYKGNYSQFVKTKPEAKKN 293 (582)
T ss_pred ecCCcccchhHHHHHHHHHHhhC--------CceEEEEeccHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHhhHHhhhh
Confidence 99999999999999999999764 4899999999999999999888776544321100
Q ss_pred ----------------------------------------------ccccc-------ccccc-----------------
Q psy7365 348 ----------------------------------------------SVFLK-------NSFAR----------------- 357 (601)
Q Consensus 348 ----------------------------------------------~~lLk-------~~~g~----------------- 357 (601)
++..+ ++.++
T Consensus 294 ~qrefe~q~~~R~h~q~fid~FrYna~ra~svqSRIk~L~kl~~lk~~~~~~~~~~~fP~~~e~~~~p~l~i~~V~f~y~ 373 (582)
T KOG0062|consen 294 QQREFEVQMKYRAHLQVFIDKFRYNAARASSVQSRIKMLGKLPALKSTLIEVLIGFLFPTEGEVLSPPNLRISYVAFEYT 373 (582)
T ss_pred hhhhcchHHHHHHHHHHHHHHhccCcccchhHHHHHHHhccCCCCCccceecccceecCCCCCcCCCCeeEEEeeeccCC
Confidence 00000 00000
Q ss_pred --ccc----cccc---------------------------cC------CcccccccccCCCCcccCCCCCHHHHHHHhHH
Q psy7365 358 --GYY----LSLD---------------------------MK------SAPQKSYIGYCPQFDALNDRLTPREHLEFYSR 398 (601)
Q Consensus 358 --g~~----igld---------------------------~~------~~~~~~~ig~v~Q~~~l~~~lTv~E~L~~~~~ 398 (601)
.|. .+.+ .. ....|.+++|..|+..=+.++.|-+.-.....
T Consensus 374 p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~r~ri~~f~Qhhvd~l~~~v~~vd~~~~~ 453 (582)
T KOG0062|consen 374 PSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHPRLRIKYFAQHHVDFLDKNVNAVDFMEKS 453 (582)
T ss_pred CcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecccceecchhHhhhhHHHHHhHHHHHHHHh
Confidence 000 0000 00 01124678999987543334444432222223
Q ss_pred hcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
Q psy7365 399 VRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERAV 477 (601)
Q Consensus 399 ~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~ 477 (601)
..|.+ ++.+++-+..|||+ +...+++.+||||||-||++|.+...+|.+|+|||||+.||..+...+...|+.+
T Consensus 454 ~pG~~----~ee~r~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F- 528 (582)
T KOG0062|consen 454 FPGKT----EEEIRRHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF- 528 (582)
T ss_pred CCCCC----HHHHHHHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc-
Confidence 33443 45677889999997 5677788999999999999999999999999999999999999999999999887
Q ss_pred hCCcEEEEEccChhHHHhhCCEEEEEeCCEEEE-ecCHHHH
Q psy7365 478 SEGRCVILTSHNMEECEALCTKLTIMVNGQFTC-LGSATHL 517 (601)
Q Consensus 478 ~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~-~G~~~~L 517 (601)
+..||++|||.+++..+|+.+++.++|++.. .|...+-
T Consensus 529 --~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~~~y 567 (582)
T KOG0062|consen 529 --NGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGIDKY 567 (582)
T ss_pred --CCcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccHHHH
Confidence 4579999999999999999999999999864 4555443
No 256
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2.2e-34 Score=288.34 Aligned_cols=195 Identities=21% Similarity=0.224 Sum_probs=161.8
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..++++++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++..
T Consensus 23 l~~~~~~~~~~~----~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~p~~G~i~~~g~~~~~-- 88 (224)
T cd03220 23 LGILGRKGEVGE----FWALKDVSFEVPRGERIGLIGRNGA--GKSTL------LRLLAGIYPPDSGTVTVRGRVSSL-- 88 (224)
T ss_pred hhhhhhhhhcCC----eEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEchh--
Confidence 448899998765 4599999999988 999999 56665 579999999999999999987521
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
..+...+++.+||.||+.++....+.+..+.++++.++++.+|+.+..++++.+||||||||+++||+|
T Consensus 89 ---------~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral-- 157 (224)
T cd03220 89 ---------LGLGGGFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIAT-- 157 (224)
T ss_pred ---------hcccccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHH--
Confidence 111234567899999999887666655555666788999999999999999999999999999754432
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+++ |+++||
T Consensus 158 ------------------------------------~~~-----------------------------------p~llll 166 (224)
T cd03220 158 ------------------------------------ALE-----------------------------------PDILLI 166 (224)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEE
Confidence 222 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
||||+|||+.+++.+++.|.++. .+|+|||++||+.+++..+||++++|.+|+++..
T Consensus 167 DEP~~gLD~~~~~~~~~~l~~~~-----~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~ 223 (224)
T cd03220 167 DEVLAVGDAAFQEKCQRRLRELL-----KQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFD 223 (224)
T ss_pred eCCcccCCHHHHHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999872 3488999999999999999999999999998654
No 257
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-34 Score=291.25 Aligned_cols=204 Identities=26% Similarity=0.382 Sum_probs=163.5
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.++++++.|++. ..++++++||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. ..
T Consensus 2 ~~~~l~~~~~~~--~~~~l~~i~~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~~~~~~~ 71 (234)
T cd03251 2 EFKNVTFRYPGD--GPPVLRDISLDIPAGETVALVGPSGS--GKSTL------VNLIPRFYDVDSGRILIDGHDVRDYTL 71 (234)
T ss_pred EEEEEEEEeCCC--CccceeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhccccCCCCEEEECCEEhhhCCH
Confidence 378999998543 23589999999988 999999 56665 579999999999999999988753 33
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHH-----HHHHHHHHc--CCCcccCCccccCChHHHhhhh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQL-----EISNMIGDL--GIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
...++.+||+||++.+|+ .|+.||+.++.... ....... .+.+.++.+ |+....++++.+||||||||++
T Consensus 72 ~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~ 148 (234)
T cd03251 72 ASLRRQIGLVSQDVFLFN-DTVAENIAYGRPGA--TREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIA 148 (234)
T ss_pred HHHHhhEEEeCCCCeecc-ccHHHHhhccCCCC--CHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHH
Confidence 445678999999998886 69999998865422 2222221 245666776 7787888899999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+||+|+ .+
T Consensus 149 la~al~--------------------------------------~~---------------------------------- 156 (234)
T cd03251 149 IARALL--------------------------------------KD---------------------------------- 156 (234)
T ss_pred HHHHHh--------------------------------------cC----------------------------------
Confidence 654322 22
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.+++.+++.|+++ . +|.|||++||+++++.. ||++++|.+|++...+.
T Consensus 157 -p~lllLDEP~~~LD~~~~~~l~~~l~~~-----~-~~~tii~~sh~~~~~~~-~d~v~~l~~G~i~~~~~ 219 (234)
T cd03251 157 -PPILILDEATSALDTESERLVQAALERL-----M-KNRTTFVIAHRLSTIEN-ADRIVVLEDGKIVERGT 219 (234)
T ss_pred -CCEEEEeCccccCCHHHHHHHHHHHHHh-----c-CCCEEEEEecCHHHHhh-CCEEEEecCCeEeeeCC
Confidence 5899999999999999999999999987 2 37899999999999976 99999999999876654
No 258
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=292.49 Aligned_cols=208 Identities=24% Similarity=0.334 Sum_probs=168.9
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC--C---CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP--V---SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~--~---~~G~v~~~g~ 117 (601)
+..+++|++.|+. .++++|+||++.+ +||||+ ||||| .++|+|+++ | ++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~i~~~g~ 72 (252)
T PRK14255 5 IITSSDVHLFYGK----FEALKGIDLDFNQNEITALIGPSGC--GKSTY------LRTLNRMNDLIPGVTITGNVSLRGQ 72 (252)
T ss_pred eEEEEeEEEEECC----eeEEecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccccCCCCCcccEEEEcCE
Confidence 3458999999863 4599999999988 999999 57665 679999975 5 5999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCCh-HHHHHHHHHHHHHcCCC----cccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPK-DLAQLEISNMIGDLGIP----HKRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~gl~----~~~~~~~~~LSg 189 (601)
++.. .....++.+||+||++.+|+ .|+.||+.++....+... +....++.+.++.+++. +..++.+.+|||
T Consensus 73 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~ 151 (252)
T PRK14255 73 NIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSG 151 (252)
T ss_pred EcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCH
Confidence 8743 23345678999999999887 799999998765555432 33345677888888864 456889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+|+ .+
T Consensus 152 Gq~qrv~laral~--------------------------------------~~--------------------------- 166 (252)
T PRK14255 152 GQQQRVCIARVLA--------------------------------------VK--------------------------- 166 (252)
T ss_pred HHHHHHHHHHHHh--------------------------------------cC---------------------------
Confidence 9999998654332 22
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+.+.|+++. ++.|+|++||+++++...||++++|++|+++..+++
T Consensus 167 --------p~llllDEPt~~LD~~~~~~l~~~l~~~~------~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14255 167 --------PDVILLDEPTSALDPISSTQIENMLLELR------DQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADT 231 (252)
T ss_pred --------CCEEEEcCCCccCCHHHHHHHHHHHHHHH------hCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 58999999999999999999999999872 247999999999999999999999999999876644
No 259
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=9.7e-35 Score=289.20 Aligned_cols=198 Identities=26% Similarity=0.359 Sum_probs=158.3
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.+++|++.|++. ..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. ..
T Consensus 4 ~~~~l~~~~~~~--~~~~l~~i~~~i~~G~~~~i~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~~ 73 (220)
T cd03245 4 EFRNVSFSYPNQ--EIPALDNVSLTIRAGEKVAIIGRVGS--GKSTL------LKLLAGLYKPTSGSVLLDGTDIRQLDP 73 (220)
T ss_pred EEEEEEEEcCCC--CcccccceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCcCCCCCeEEECCEEhHHCCH
Confidence 378999998532 24699999999988 999999 56655 579999999999999999998743 23
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCcc-----------ccCChHHH
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLA-----------NTLSGGMQ 192 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgG~~ 192 (601)
...++.++|+||++.+|+ .|+.||+.++... .. ..++.++++.+++.+..++.+ .+||||||
T Consensus 74 ~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~--~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~ 146 (220)
T cd03245 74 ADLRRNIGYVPQDVTLFY-GTLRDNITLGAPL--AD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQR 146 (220)
T ss_pred HHHHhhEEEeCCCCcccc-chHHHHhhcCCCC--CC----HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHH
Confidence 345678999999998886 6999999775321 11 234567888888877666544 69999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++||+| +.+
T Consensus 147 qrl~la~al--------------------------------------~~~------------------------------ 158 (220)
T cd03245 147 QAVALARAL--------------------------------------LND------------------------------ 158 (220)
T ss_pred HHHHHHHHH--------------------------------------hcC------------------------------
Confidence 999764432 222
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|+++||||||+|||+.++..+++.|+++. . ++|||++||++++. .+||++++|.+|+++..
T Consensus 159 -----p~llllDEPt~~LD~~~~~~l~~~l~~~~-----~-~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~~ 219 (220)
T cd03245 159 -----PPILLLDEPTSAMDMNSEERLKERLRQLL-----G-DKTLIIITHRPSLL-DLVDRIIVMDSGRIVAD 219 (220)
T ss_pred -----CCEEEEeCccccCCHHHHHHHHHHHHHhc-----C-CCEEEEEeCCHHHH-HhCCEEEEEeCCeEeec
Confidence 58999999999999999999999999872 2 38999999999987 69999999999987643
No 260
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.6e-34 Score=281.73 Aligned_cols=175 Identities=22% Similarity=0.323 Sum_probs=145.3
Q ss_pred cceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC---chHHhcccEEEEccC
Q psy7365 66 SYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT---DMTTIRRSLGVCPQY 136 (601)
Q Consensus 66 ~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~---~~~~~~~~ig~v~Q~ 136 (601)
..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. .....++.+||+||+
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 76 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGA--GKSTL------LLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQD 76 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecC
Confidence 4689999999988 999999 56665 579999999999999999998742 223456789999999
Q ss_pred CC-CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhh
Q psy7365 137 NA-LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMN 215 (601)
Q Consensus 137 ~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~ 215 (601)
+. .++..||.||+.|.....+.+..+..+++.++++.+||.+..++++.+||||||||+++||+|
T Consensus 77 ~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral-------------- 142 (190)
T TIGR01166 77 PDDQLFAADVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRERPTHCLSGGEKKRVAIAGAV-------------- 142 (190)
T ss_pred hhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCChhhCCHHHHHHHHHHHHH--------------
Confidence 84 334579999999876555666556667789999999999999999999999999999754432
Q ss_pred hhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHH
Q psy7365 216 AANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSR 295 (601)
Q Consensus 216 ~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~ 295 (601)
+.+ |+++||||||+|||+.++
T Consensus 143 ------------------------~~~-----------------------------------p~llllDEPt~~LD~~~~ 163 (190)
T TIGR01166 143 ------------------------AMR-----------------------------------PDVLLLDEPTAGLDPAGR 163 (190)
T ss_pred ------------------------hcC-----------------------------------CCEEEEcCCcccCCHHHH
Confidence 233 589999999999999999
Q ss_pred HHHHHHHHHHhhhccccCCcEEEEEecchhH
Q psy7365 296 RSIWELLIKVYYASHSLSGRTVILTTHYMDE 326 (601)
Q Consensus 296 ~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~ 326 (601)
..++++|+++. .+|+|||++||++++
T Consensus 164 ~~~~~~l~~~~-----~~~~tili~sH~~~~ 189 (190)
T TIGR01166 164 EQMLAILRRLR-----AEGMTVVISTHDVDL 189 (190)
T ss_pred HHHHHHHHHHH-----HcCCEEEEEeecccc
Confidence 99999999873 358999999999875
No 261
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-34 Score=284.08 Aligned_cols=187 Identities=19% Similarity=0.202 Sum_probs=154.4
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC---CCeeEEEEccccCCC
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP---VSSGTAKIYDHDIRT 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~---~~~G~v~~~g~~~~~ 121 (601)
.++||++.|.+.+.+.++++|+||++.+ +||||| ||||| .++|+|+++ |++|+|.++|.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~~~~G~i~i~g~~~~~ 76 (202)
T cd03233 5 SWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGS--GCSTL------LKALANRTEGNVSVEGDIHYNGIPYKE 76 (202)
T ss_pred EEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCC--CHHHH------HHHhcccCCCCCCcceEEEECCEECcc
Confidence 3899999998776678899999999988 999999 56665 579999999 899999999998865
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
.....++.++|+||++.+|+.+||.||+.++.... .++++.+|||||+||+++||||
T Consensus 77 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----------------------~~~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 77 FAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK-----------------------GNEFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred chhhhcceEEEEecccccCCCCcHHHHHhhhhhhc-----------------------cccchhhCCHHHHHHHHHHHHH
Confidence 43455778999999999999999999998754211 5678899999999999865433
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+++ |+++
T Consensus 134 --------------------------------------~~~-----------------------------------p~ll 140 (202)
T cd03233 134 --------------------------------------VSR-----------------------------------ASVL 140 (202)
T ss_pred --------------------------------------hhC-----------------------------------CCEE
Confidence 233 5899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEE-ecchhHHHhcCCEEEEecCCccccc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILT-THYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~-tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
||||||+|||+.+++.++++|+++. +..+.|+|++ +|+.+++...||++++|.+|+++..
T Consensus 141 llDEPt~~LD~~~~~~~~~~l~~~~----~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~ 201 (202)
T cd03233 141 CWDNSTRGLDSSTALEILKCIRTMA----DVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYY 201 (202)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHH----HhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEec
Confidence 9999999999999999999999873 2235665554 5667899999999999999998643
No 262
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.2e-34 Score=291.39 Aligned_cols=211 Identities=19% Similarity=0.229 Sum_probs=168.7
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCC--CCCCeeEEEEccccCC
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGM--LPVSSGTAKIYDHDIR 120 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl--~~~~~G~v~~~g~~~~ 120 (601)
+..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+ ++|++|+|.++|.++.
T Consensus 7 ~l~~~~l~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~Gl~~~~~~~G~i~~~g~~~~ 74 (252)
T CHL00131 7 ILEIKNLHASVNE----NEILKGLNLSINKGEIHAIMGPNGS--GKSTL------SKVIAGHPAYKILEGDILFKGESIL 74 (252)
T ss_pred eEEEEeEEEEeCC----EEeeecceeEEcCCcEEEEECCCCC--CHHHH------HHHHcCCCcCcCCCceEEECCEEcc
Confidence 3458999999853 3599999999988 999999 56655 5799998 5899999999999875
Q ss_pred Cc-hHHhc-ccEEEEccCCCCCCCCCHHHHHHHhHhhc----CC---ChHHHHHHHHHHHHHcCCC-cccCCccc-cCCh
Q psy7365 121 TD-MTTIR-RSLGVCPQYNALFDKLTVEEHMWFYSQLK----QV---PKDLAQLEISNMIGDLGIP-HKRTSLAN-TLSG 189 (601)
Q Consensus 121 ~~-~~~~~-~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~----~~---~~~~~~~~~~~~l~~~gl~-~~~~~~~~-~LSg 189 (601)
.. ....+ ..++|+||++.+|+.+|+.+++.+..... +. ...+...++.++++.+|+. ...++.+. +|||
T Consensus 75 ~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSg 154 (252)
T CHL00131 75 DLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSG 154 (252)
T ss_pred cCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCH
Confidence 42 22222 25899999999999999999998754321 11 1223345678899999997 46788887 5999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+| +.+
T Consensus 155 G~~qrv~la~al--------------------------------------~~~--------------------------- 169 (252)
T CHL00131 155 GEKKRNEILQMA--------------------------------------LLD--------------------------- 169 (252)
T ss_pred HHHHHHHHHHHH--------------------------------------HcC---------------------------
Confidence 999999865432 233
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhc-CCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLL-GDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l-~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.+++.++++|+++. .+|.|||++||+++++... ||++++|.+|+++..+++
T Consensus 170 --------p~llllDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~ 236 (252)
T CHL00131 170 --------SELAILDETDSGLDIDALKIIAEGINKLM-----TSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDA 236 (252)
T ss_pred --------CCEEEEcCCcccCCHHHHHHHHHHHHHHH-----hCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecCh
Confidence 58999999999999999999999999873 3589999999999999886 999999999999877654
Q ss_pred c
Q psy7365 349 V 349 (601)
Q Consensus 349 ~ 349 (601)
.
T Consensus 237 ~ 237 (252)
T CHL00131 237 E 237 (252)
T ss_pred h
Confidence 3
No 263
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=293.23 Aligned_cols=209 Identities=23% Similarity=0.299 Sum_probs=169.9
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEc
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIY 115 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~ 115 (601)
..+..++.+++.|++ ..+++|+||++.+ +||||+ ||||| .++|+|+++| ++|+|.++
T Consensus 6 ~~~~~~~~~~~~~~~----~~~l~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 6 PIVMDCKLDKIFYGN----FMAVRDSHVPIRKNEITGFIGPSGC--GKSTV------LRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred CceEEEEeEEEEeCC----EEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHcccccccCCCCceEEEEC
Confidence 344557888888754 4599999999998 999999 56665 5799999986 79999999
Q ss_pred cccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc----ccCCccccCC
Q psy7365 116 DHDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH----KRTSLANTLS 188 (601)
Q Consensus 116 g~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----~~~~~~~~LS 188 (601)
|.++.. .....++.+||+||++.+| .+|+.||+.++....+.. .+...++.++++.+|+.+ ..++++.+||
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS 151 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNRYK-GDLGDRVKHALQGAALWDEVKDKLKVSGLSLS 151 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcCch-HHHHHHHHHHHHHcCCchhhhhhhhCCcccCC
Confidence 998743 2234567899999999887 699999999876654433 334567889999999864 3467889999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
|||+||+++||||+ .+
T Consensus 152 ~G~~qrv~laral~--------------------------------------~~-------------------------- 167 (261)
T PRK14263 152 GGQQQRLCIARAIA--------------------------------------TE-------------------------- 167 (261)
T ss_pred HHHHHHHHHHHHHH--------------------------------------cC--------------------------
Confidence 99999997654332 22
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec--------CC
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA--------AG 340 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~--------~G 340 (601)
|+++||||||+|||+.++..++++|+++. ++.|+|++||+++++..+|||+++|. +|
T Consensus 168 ---------p~llllDEPtsgLD~~~~~~l~~~l~~~~------~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G 232 (261)
T PRK14263 168 ---------PEVLLLDEPCSALDPIATRRVEELMVELK------KDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTG 232 (261)
T ss_pred ---------CCEEEEeCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCc
Confidence 58999999999999999999999999872 36899999999999999999999995 78
Q ss_pred ccccccCc
Q psy7365 341 KLQCCGSS 348 (601)
Q Consensus 341 kIv~~G~~ 348 (601)
+++..+..
T Consensus 233 ~i~~~g~~ 240 (261)
T PRK14263 233 YLVEMGPT 240 (261)
T ss_pred eEEEeCCH
Confidence 88876653
No 264
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=294.76 Aligned_cols=179 Identities=23% Similarity=0.384 Sum_probs=153.6
Q ss_pred ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-----chHHhcccEEEEccCCCCCCCCCHHHHHHHhH
Q psy7365 79 LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-----DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYS 153 (601)
Q Consensus 79 ~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-----~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~ 153 (601)
.|+||+ ||||| .|||+|+++|+.|.|.++|+.+.. ....-+++||||||+..+||++||+.|+.|+.
T Consensus 30 FG~SGs--GKTsl------in~IaGL~rPdeG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrgNL~YG~ 101 (352)
T COG4148 30 FGPSGS--GKTSL------INMIAGLTRPDEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRGNLRYGM 101 (352)
T ss_pred ecCCCC--ChhhH------HHHHhccCCccccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEecchhhhh
Confidence 799999 67765 679999999999999999997642 12234678999999999999999999999876
Q ss_pred hhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcc
Q psy7365 154 QLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRD 233 (601)
Q Consensus 154 ~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~ 233 (601)
... .....+++.+.+||+++.+|+|.+|||||||||+|+|||
T Consensus 102 ~~~------~~~~fd~iv~lLGI~hLL~R~P~~LSGGEkQRVAIGRAL-------------------------------- 143 (352)
T COG4148 102 WKS------MRAQFDQLVALLGIEHLLDRYPGTLSGGEKQRVAIGRAL-------------------------------- 143 (352)
T ss_pred ccc------chHhHHHHHHHhCcHHHHhhCCCccCcchhhHHHHHHHH--------------------------------
Confidence 543 334577889999999999999999999999999865433
Q ss_pred hhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccC
Q psy7365 234 DYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLS 313 (601)
Q Consensus 234 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~ 313 (601)
+.. |++|+||||.++||..-++++.-.|.++.+ +-
T Consensus 144 ------Lt~-----------------------------------P~LLLmDEPLaSLD~~RK~EilpylERL~~----e~ 178 (352)
T COG4148 144 ------LTA-----------------------------------PELLLMDEPLASLDLPRKREILPYLERLRD----EI 178 (352)
T ss_pred ------hcC-----------------------------------CCeeeecCchhhcccchhhHHHHHHHHHHH----hc
Confidence 222 589999999999999999999999999953 45
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
...|+++||.++|+.+++|++++|++|++.+.|..
T Consensus 179 ~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~ 213 (352)
T COG4148 179 NIPILYVSHSLDEVLRLADRVVVLENGKVKASGPL 213 (352)
T ss_pred CCCEEEEecCHHHHHhhhheEEEecCCeEEecCcH
Confidence 78999999999999999999999999999988853
No 265
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=296.65 Aligned_cols=207 Identities=20% Similarity=0.308 Sum_probs=164.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..+++|++.|++ +..+++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++..
T Consensus 7 l~~~~l~~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~~-- 73 (272)
T PRK15056 7 IVVNDVTVTWRN---GHTALRDASFTVPGGSIAALVGVNGS--GKSTL------FKALMGFVRLASGKISILGQPTRQ-- 73 (272)
T ss_pred EEEEeEEEEecC---CcEEEEeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEhHH--
Confidence 458999999852 24599999999988 999999 56665 679999999999999999998742
Q ss_pred HHhcccEEEEccCCCCC--CCCCHHHHHHHhHh----hcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 124 TTIRRSLGVCPQYNALF--DKLTVEEHMWFYSQ----LKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~--~~~tv~e~l~~~~~----~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
...++.+||+||++.++ ...++.+++.++.. ..+.+....+.++.++++.+|+.+..++++.+||||||||+++
T Consensus 74 ~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~l 153 (272)
T PRK15056 74 ALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIGELSGGQKKRVFL 153 (272)
T ss_pred hhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcccCCHHHHHHHHH
Confidence 12234699999998652 23578888865321 1112223345567889999999998999999999999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
||+| +.+
T Consensus 154 araL--------------------------------------~~~----------------------------------- 160 (272)
T PRK15056 154 ARAI--------------------------------------AQQ----------------------------------- 160 (272)
T ss_pred HHHH--------------------------------------hcC-----------------------------------
Confidence 5432 222
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.+++.+.++|.++. .+|+|||++||+++++..+||+++++ +|+++..+++
T Consensus 161 p~llllDEPt~~LD~~~~~~l~~~L~~~~-----~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~ 225 (272)
T PRK15056 161 GQVILLDEPFTGVDVKTEARIISLLRELR-----DEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPT 225 (272)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCH
Confidence 58999999999999999999999999873 35899999999999999999999877 8998876654
No 266
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=302.20 Aligned_cols=211 Identities=19% Similarity=0.283 Sum_probs=172.7
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g~ 117 (601)
++.++++++.|.. ...++++|+||++.+ +||||| ||||| .++|+|+.+ |++|+|.++|.
T Consensus 80 ~i~~~nls~~y~~--~~~~~L~~is~~I~~Ge~v~IvG~~Gs--GKSTL------l~~L~g~~~~~~~~p~~G~I~idG~ 149 (329)
T PRK14257 80 VFEIRNFNFWYMN--RTKHVLHDLNLDIKRNKVTAFIGPSGC--GKSTF------LRNLNQLNDLIEGTSHEGEIYFLGT 149 (329)
T ss_pred eEEEEeeEEEecC--CCceeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhccccccCCCCCceEEEECCE
Confidence 4569999999853 235699999999988 999999 56655 579999986 57999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHH-HHHHHHHHHHHcCCC----cccCCccccCCh
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDL-AQLEISNMIGDLGIP----HKRTSLANTLSG 189 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~-~~~~~~~~l~~~gl~----~~~~~~~~~LSg 189 (601)
++.. ....+++++||+||+|.+|. .|++||+.|+....+.+..+ ..+.+.++++.++|. ...++++.+|||
T Consensus 150 ~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 150 NTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSG 228 (329)
T ss_pred EccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCH
Confidence 9853 22456788999999999884 79999999876544444332 334567889998874 356889999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||||+ .+
T Consensus 229 GqkqRl~LARAl~--------------------------------------~~--------------------------- 243 (329)
T PRK14257 229 GQQQRLCIARAIA--------------------------------------LE--------------------------- 243 (329)
T ss_pred HHHHHHHHHHHHH--------------------------------------hC---------------------------
Confidence 9999998655433 22
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++||||||++||+.+...+.+.|+++. +++|+|++||+++++.++||||++|.+|+++..|++.
T Consensus 244 --------p~IlLLDEPts~LD~~~~~~i~~~i~~l~------~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~ 309 (329)
T PRK14257 244 --------PEVLLMDEPTSALDPIATAKIEELILELK------KKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETK 309 (329)
T ss_pred --------CCEEEEeCCcccCCHHHHHHHHHHHHHHh------cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 58999999999999999999999999872 3689999999999999999999999999999888654
No 267
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=294.06 Aligned_cols=208 Identities=20% Similarity=0.268 Sum_probs=179.1
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCcc-------cccccccCC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSAP-------QKSYIGYCP 378 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~~-------~~~~ig~v~ 378 (601)
.|.++=+ ++.++...-+...++|+=. .+|+++++ .++.|+..+.+.|+.... .++++++||
T Consensus 38 tg~vvGv--~~~sl~v~~GeIfViMGLS---GSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVF 112 (386)
T COG4175 38 TGLVVGV--NDASLDVEEGEIFVIMGLS---GSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVF 112 (386)
T ss_pred hCcEEee--ccceeeecCCeEEEEEecC---CCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhh
Confidence 4665543 8888888888888888631 14555443 344555555555543322 357899999
Q ss_pred CCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCC
Q psy7365 379 QFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPT 458 (601)
Q Consensus 379 Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPT 458 (601)
|+.+++|+.||.||..|...+.|.++.+.++++.++|+.+||.++.+++|.+|||||||||.|||||+.+|++|++|||+
T Consensus 113 Q~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaF 192 (386)
T COG4175 113 QSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAF 192 (386)
T ss_pred hhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCce
Q psy7365 459 SGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGY 525 (601)
Q Consensus 459 sGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~ 525 (601)
|.|||--|.++.+.|.+|.++ ++||+++|||++|+.++.|||++|++|+|+..|+|+|+.......|
T Consensus 193 SALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 193 SALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEILLNPANDY 260 (386)
T ss_pred hhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHHHcCccHHH
Confidence 999999999999999999766 8999999999999999999999999999999999999976554444
No 268
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=294.57 Aligned_cols=207 Identities=25% Similarity=0.316 Sum_probs=167.2
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g~ 117 (601)
+..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++| ++|+|.++|.
T Consensus 20 ~l~~~nl~~~~~~----~~~l~~vs~~i~~Ge~~~IiG~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~i~~~g~ 87 (274)
T PRK14265 20 VFEVEGVKVFYGG----FLALVDVHLKIPAKKIIAFIGPSGC--GKSTL------LRCFNRMNDLIPGAKVEGRLLYRDR 87 (274)
T ss_pred eEEEeeEEEEeCC----eEEEeeeeeEEcCCCEEEEECCCCC--CHHHH------HHHHhcccccccCCCcCceEEECCE
Confidence 4568999999864 3599999999988 999999 56665 6799999863 6999999999
Q ss_pred cCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC----cccCCccccCChH
Q psy7365 118 DIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP----HKRTSLANTLSGG 190 (601)
Q Consensus 118 ~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LSgG 190 (601)
++.. .....++++||+||++.+|+. |+.||+.++....+... .....+.++++.+++. +..++++.+||||
T Consensus 88 ~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG 165 (274)
T PRK14265 88 NIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANGYKG-NLDELVEDSLRRAAIWEEVKDKLKEKGTALSGG 165 (274)
T ss_pred ecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcCchH-HHHHHHHHHHHHcccchhhHHHhcCCcccCCHH
Confidence 8743 223456789999999988864 99999998755444322 2334567788888873 4578899999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||||+ .+
T Consensus 166 q~qrv~LAraL~--------------------------------------~~---------------------------- 179 (274)
T PRK14265 166 QQQRLCIARAIA--------------------------------------MK---------------------------- 179 (274)
T ss_pred HHHHHHHHHHHh--------------------------------------hC----------------------------
Confidence 999998654332 22
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec---------CCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA---------AGK 341 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~---------~Gk 341 (601)
|+++||||||+|||+.++..++++|+++. ++.|||++||+++++..+||++++|. +|+
T Consensus 180 -------p~lllLDEPt~~LD~~~~~~l~~~L~~~~------~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~ 246 (274)
T PRK14265 180 -------PDVLLMDEPCSALDPISTRQVEELCLELK------EQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGK 246 (274)
T ss_pred -------CCEEEEeCCcccCCHHHHHHHHHHHHHHh------cCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCce
Confidence 58999999999999999999999999872 36899999999999999999999997 688
Q ss_pred cccccCc
Q psy7365 342 LQCCGSS 348 (601)
Q Consensus 342 Iv~~G~~ 348 (601)
++..+.+
T Consensus 247 ~~~~g~~ 253 (274)
T PRK14265 247 LVEFSPT 253 (274)
T ss_pred EEEeCCH
Confidence 8776654
No 269
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-34 Score=268.88 Aligned_cols=208 Identities=23% Similarity=0.339 Sum_probs=180.4
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC--C-
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR--T- 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~--~- 121 (601)
.+.++++.||.. +++-|++|+... +||||+ ||||| .|.++=+..|.||+..|.|.... +
T Consensus 4 rv~~in~~yg~~----q~lfdi~l~~~~getlvllgpsga--gkssl------lr~lnlle~p~sg~l~ia~~~fd~s~~ 71 (242)
T COG4161 4 QLNGINCFYGAH----QALFDITLDCPEGETLVLLGPSGA--GKSSL------LRVLNLLEMPRSGTLNIAGNHFDFSKT 71 (242)
T ss_pred EEcccccccccc----hheeeeeecCCCCCEEEEECCCCC--chHHH------HHHHHHHhCCCCCeEEecccccccccC
Confidence 367788887654 499999999876 999999 56655 56889889999999999987542 1
Q ss_pred ----chHHhcccEEEEccCCCCCCCCCHHHHHHH-hHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhh
Q psy7365 122 ----DMTTIRRSLGVCPQYNALFDKLTVEEHMWF-YSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 122 ----~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
....+|+.+|+|||...++|++||.||+.- .+...|+++++++.++.++|+++.|.++.|+.|-.|||||+|||+
T Consensus 72 ~~~k~i~~lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~plhlsggqqqrva 151 (242)
T COG4161 72 PSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPLHLSGGQQQRVA 151 (242)
T ss_pred ccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCceecccchhhhHH
Confidence 234578899999999999999999999864 567889999999999999999999999999999999999999997
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
||| |+| .
T Consensus 152 iar------------------------alm-------------------------------------------------m 158 (242)
T COG4161 152 IAR------------------------ALM-------------------------------------------------M 158 (242)
T ss_pred HHH------------------------HHh-------------------------------------------------c
Confidence 543 321 2
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
.|++|++||||++|||.-...+.++|+++ ...|.|-+++||.++.+.+.+.+|+.|.+|+|+..|+.
T Consensus 159 kpqvllfdeptaaldpeitaqvv~iikel-----~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a 225 (242)
T COG4161 159 EPQVLLFDEPTAALDPEITAQIVSIIKEL-----AETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDA 225 (242)
T ss_pred CCcEEeecCcccccCHHHHHHHHHHHHHH-----HhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecch
Confidence 36999999999999999999999999998 45799999999999999999999999999999988864
No 270
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.4e-34 Score=289.35 Aligned_cols=201 Identities=21% Similarity=0.347 Sum_probs=161.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..++++++.|+..+ ..++++++||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. .
T Consensus 12 l~~~~l~~~~~~~~-~~~~l~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~ 82 (226)
T cd03248 12 VKFQNVTFAYPTRP-DTLVLQDVSFTLHPGEVTALVGPSGS--GKSTV------VALLENFYQPQGGQVLLDGKPISQYE 82 (226)
T ss_pred EEEEEEEEEeCCCC-CCccccceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCcCCCCcEEEECCCchHHcC
Confidence 45899999986422 24699999999988 999999 56665 579999999999999999998743 2
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHH-----HHHHHHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLA-----QLEISNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
....++.++|+||++.+|+ .|+.||+.++.... ...+. +..+.++++.+ |+....++++.+||||||||+
T Consensus 83 ~~~~~~~i~~~~q~~~l~~-~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv 159 (226)
T cd03248 83 HKYLHSKVSLVGQEPVLFA-RSLQDNIAYGLQSC--SFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRV 159 (226)
T ss_pred HHHHHhhEEEEecccHHHh-hhHHHHhccccCCC--CHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHH
Confidence 3345678999999998875 69999998754322 11111 12356788888 888888999999999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++||++ +.+
T Consensus 160 ~laral--------------------------------------~~~--------------------------------- 168 (226)
T cd03248 160 AIARAL--------------------------------------IRN--------------------------------- 168 (226)
T ss_pred HHHHHH--------------------------------------hcC---------------------------------
Confidence 754432 222
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
|+++||||||+|||+.++..+++.|+++. ++.|+|++||+++++.. ||++++|.+|++
T Consensus 169 --p~llllDEPt~~LD~~~~~~l~~~l~~~~------~~~tii~~sh~~~~~~~-~d~i~~l~~g~i 226 (226)
T cd03248 169 --PQVLILDEATSALDAESEQQVQQALYDWP------ERRTVLVIAHRLSTVER-ADQILVLDGGRI 226 (226)
T ss_pred --CCEEEEeCCcccCCHHHHHHHHHHHHHHc------CCCEEEEEECCHHHHHh-CCEEEEecCCcC
Confidence 58999999999999999999999999872 25899999999999965 999999999864
No 271
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=318.60 Aligned_cols=206 Identities=25% Similarity=0.330 Sum_probs=168.7
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
++..+++|++ ++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 256 ~~l~~~~l~~---------~~l~~vsl~i~~Ge~~~liG~NGs--GKSTL------l~~l~G~~~p~~G~I~~~g~~i~~ 318 (501)
T PRK10762 256 VRLKVDNLSG---------PGVNDVSFTLRKGEILGVSGLMGA--GRTEL------MKVLYGALPRTSGYVTLDGHEVVT 318 (501)
T ss_pred cEEEEeCccc---------CCcccceEEEcCCcEEEEecCCCC--CHHHH------HHHHhCCCCCCceEEEECCEECCC
Confidence 4556888874 269999999988 999999 56665 579999999999999999998753
Q ss_pred c--hHHhcccEEEEccCC---CCCCCCCHHHHHHHhHhh-c----C-CChHHHHHHHHHHHHHcCCC-cccCCccccCCh
Q psy7365 122 D--MTTIRRSLGVCPQYN---ALFDKLTVEEHMWFYSQL-K----Q-VPKDLAQLEISNMIGDLGIP-HKRTSLANTLSG 189 (601)
Q Consensus 122 ~--~~~~~~~ig~v~Q~~---~~~~~~tv~e~l~~~~~~-~----~-~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSg 189 (601)
. ....++++||+||++ .+++.+||.||+.++... . + .+..+.+.++.++++.+|+. +..++++.+|||
T Consensus 319 ~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSg 398 (501)
T PRK10762 319 RSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIGLLSG 398 (501)
T ss_pred CCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCchhhCCH
Confidence 2 233566899999997 488899999999875321 1 1 23334456788999999995 678999999999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||++ +.+
T Consensus 399 Gekqrv~lA~al--------------------------------------~~~--------------------------- 413 (501)
T PRK10762 399 GNQQKVAIARGL--------------------------------------MTR--------------------------- 413 (501)
T ss_pred HHHHHHHHHHHH--------------------------------------hhC---------------------------
Confidence 999999854432 222
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|||||||+|||+.+++.++++|+++. .+|.|||++|||++++..+||++++|.+|+++..++.
T Consensus 414 --------p~lllLDEPt~~LD~~~~~~l~~~l~~~~-----~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~ 479 (501)
T PRK10762 414 --------PKVLILDEPTRGVDVGAKKEIYQLINQFK-----AEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTR 479 (501)
T ss_pred --------CCEEEEcCCCCCCCHhHHHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecc
Confidence 58999999999999999999999999973 3589999999999999999999999999998766543
No 272
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=290.35 Aligned_cols=209 Identities=23% Similarity=0.324 Sum_probs=171.0
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC-----CCeeEEEEcc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP-----VSSGTAKIYD 116 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~-----~~~G~v~~~g 116 (601)
+...+++|++.|++ ..+++|+||++.+ +||||+ ||||| .++|+|+++ |++|+|.++|
T Consensus 2 ~~l~~~~v~~~~~~----~~~l~~~s~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 2 YRIEVENLNTYFDD----AHILKNVNLDIPKNSVTALIGPSGC--GKSTF------IRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred cEEEEEeEEEEeCC----eEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHHhhhccCCCCCCccEEEECC
Confidence 34558999999863 4599999999988 999999 56665 679999864 4899999999
Q ss_pred ccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCC-ChHHHHHHHHHHHHHcCCC----cccCCccccCC
Q psy7365 117 HDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQV-PKDLAQLEISNMIGDLGIP----HKRTSLANTLS 188 (601)
Q Consensus 117 ~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~gl~----~~~~~~~~~LS 188 (601)
.++.. .....++.+||+||++.+|+. |+.||+.++....+. +.+..++++.++++.+|+. +..++++.+||
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS 148 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLS 148 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCC
Confidence 98753 234557789999999998875 999999886554443 2344567788999999984 34688899999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+++||+| +.+
T Consensus 149 ~Gq~qrv~laral--------------------------------------~~~-------------------------- 164 (250)
T PRK14266 149 GGQQQRLCIARTI--------------------------------------AVS-------------------------- 164 (250)
T ss_pred HHHHHHHHHHHHH--------------------------------------HcC--------------------------
Confidence 9999999865432 222
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++++|||||+|||+.++..++++|+++. +|.|||++||+++++...||++++|.+|++...+++
T Consensus 165 ---------p~llllDEP~~gLD~~~~~~l~~~l~~~~------~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~ 229 (250)
T PRK14266 165 ---------PEVILMDEPCSALDPISTTKIEDLIHKLK------EDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLT 229 (250)
T ss_pred ---------CCEEEEcCCCccCCHHHHHHHHHHHHHHh------cCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCH
Confidence 58999999999999999999999999872 378999999999999999999999999999877654
No 273
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.4e-34 Score=288.77 Aligned_cols=204 Identities=26% Similarity=0.361 Sum_probs=159.7
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
++++++.|++. ...++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. ...
T Consensus 3 i~~l~~~~~~~-~~~~~l~~i~~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~~~ 73 (238)
T cd03249 3 FKNVSFRYPSR-PDVPILKGLSLTIPPGKTVALVGSSGC--GKSTV------VSLLERFYDPTSGEILLDGVDIRDLNLR 73 (238)
T ss_pred EEEEEEecCCC-CCccceeceEEEecCCCEEEEEeCCCC--CHHHH------HHHHhccCCCCCCEEEECCEehhhcCHH
Confidence 78999998542 124689999999988 999999 56665 579999999999999999988743 233
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHH-----HHHHHHHHc--CCCcccCCccccCChHHHhhhhc
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQL-----EISNMIGDL--GIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
..++.+||+||++.+|+ .||.||+.++.... ..++... .+.+.++.+ ++....++.+.+||||||||+++
T Consensus 74 ~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 150 (238)
T cd03249 74 WLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA--TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAI 150 (238)
T ss_pred HHHhhEEEECCchhhhh-hhHHHHhhccCCCC--CHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHH
Confidence 45667999999998876 69999998754322 1122111 123334444 56666788899999999999975
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
|+++ +. +
T Consensus 151 a~al--------------------------------------~~-----------------------------------~ 157 (238)
T cd03249 151 ARAL--------------------------------------LR-----------------------------------N 157 (238)
T ss_pred HHHH--------------------------------------hc-----------------------------------C
Confidence 4432 22 2
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.+++.+++.|+++ + +|+|||++||+++++. .||++++|.+|+++..++
T Consensus 158 p~llllDEP~~gLD~~~~~~l~~~l~~~-----~-~g~~vi~~sh~~~~~~-~~d~v~~l~~G~i~~~~~ 220 (238)
T cd03249 158 PKILLLDEATSALDAESEKLVQEALDRA-----M-KGRTTIVIAHRLSTIR-NADLIAVLQNGQVVEQGT 220 (238)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHh-----c-CCCEEEEEeCCHHHHh-hCCEEEEEECCEEEEeCC
Confidence 5899999999999999999999999986 3 5899999999999997 899999999999876654
No 274
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=290.93 Aligned_cols=209 Identities=22% Similarity=0.318 Sum_probs=170.0
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-----CeeEEEEcc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-----SSGTAKIYD 116 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-----~~G~v~~~g 116 (601)
+.+.+++|+++|+. .++++|+||++.+ +||||| ||||| .++|+|+++| ++|+|+++|
T Consensus 15 ~~l~~~~l~~~~~~----~~vl~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 15 QKSEVNKLNFYYGG----YQALKNINMMVHEKQVTALIGPSGC--GKSTF------LRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred ceEEEEEEEEEECC----eeeeeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhcccCCCCCCCcccEEEEcC
Confidence 34568999999864 3599999999988 999999 56665 5799999975 799999999
Q ss_pred ccCCC-----chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChH-HHHHHHHHHHHHcCCC----cccCCcccc
Q psy7365 117 HDIRT-----DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKD-LAQLEISNMIGDLGIP----HKRTSLANT 186 (601)
Q Consensus 117 ~~~~~-----~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~-~~~~~~~~~l~~~gl~----~~~~~~~~~ 186 (601)
.++.. .....++.+||+||++.+|+. |+.||+.++....+.+.. ..++++.++++.+++. +..++.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~ 161 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFN 161 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCccc
Confidence 87631 223456789999999998876 999999987655554432 2346678888888874 456888999
Q ss_pred CChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHH
Q psy7365 187 LSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVA 266 (601)
Q Consensus 187 LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a 266 (601)
||||||||+++||++ +.+
T Consensus 162 LS~G~~qrv~laral--------------------------------------~~~------------------------ 179 (265)
T PRK14252 162 LSGGQQQRLCIARAL--------------------------------------ATD------------------------ 179 (265)
T ss_pred CCHHHHHHHHHHHHH--------------------------------------HcC------------------------
Confidence 999999999754432 222
Q ss_pred HHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 267 VTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 267 ~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|+++||||||+|||+.++..+++.|+++. .+.|+|++||+++++..+||++++|.+|+++..+
T Consensus 180 -----------p~llllDEPt~gLD~~~~~~l~~~l~~l~------~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 180 -----------PEILLFDEPTSALDPIATASIEELISDLK------NKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred -----------CCEEEEeCCCccCCHHHHHHHHHHHHHHH------hCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 58999999999999999999999999872 2589999999999999999999999999998766
Q ss_pred Cc
Q psy7365 347 SS 348 (601)
Q Consensus 347 ~~ 348 (601)
+.
T Consensus 243 ~~ 244 (265)
T PRK14252 243 AT 244 (265)
T ss_pred CH
Confidence 43
No 275
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-34 Score=300.31 Aligned_cols=198 Identities=23% Similarity=0.367 Sum_probs=179.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccCCCCCHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALNDRLTPREHL 393 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~~~lTv~E~L 393 (601)
|++++-.+-++.+++++... ||++++++ .+.|+.++.+.++.. .+.+|.|++|||+..+||+|||+||+
T Consensus 20 ~~i~l~i~~Gef~vllGPSG---cGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Ni 96 (338)
T COG3839 20 KDVNLDIEDGEFVVLLGPSG---CGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENI 96 (338)
T ss_pred ecceEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHh
Confidence 99999999999999998632 67776553 345556566666655 44578899999999999999999999
Q ss_pred HHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHH
Q psy7365 394 EFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCI 473 (601)
Q Consensus 394 ~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL 473 (601)
.|..++.+.++++.+++++++.+.++|+++++++|.+|||||||||++||||+.+|++++||||+|.||+..|..+...|
T Consensus 97 af~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei 176 (338)
T COG3839 97 AFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEI 176 (338)
T ss_pred hhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhC
Q psy7365 474 ERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYG 522 (601)
Q Consensus 474 ~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~ 522 (601)
+++.++ |.|+|++|||-.|+..++|||++|++|+|...|+|.++.++..
T Consensus 177 ~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 177 KKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 998766 9999999999999999999999999999999999999976543
No 276
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-34 Score=288.27 Aligned_cols=196 Identities=23% Similarity=0.327 Sum_probs=172.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccC----CcccccccccCCCCcc-cCCCCCH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMK----SAPQKSYIGYCPQFDA-LNDRLTP 389 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~----~~~~~~~ig~v~Q~~~-l~~~lTv 389 (601)
+++++...-++++++++... +|+++++ ++..+..+..+.+.. ....++++|||+|+|. .+..-||
T Consensus 21 ~~v~~~i~~Ge~~~i~G~nG---sGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV 97 (235)
T COG1122 21 KDVSLEIEKGERVLLIGPNG---SGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTV 97 (235)
T ss_pred eeeEEEECCCCEEEEECCCC---CCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcH
Confidence 89999999999999998532 5665543 344455444444432 2345789999999985 6667799
Q ss_pred HHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHH
Q psy7365 390 REHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFL 469 (601)
Q Consensus 390 ~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i 469 (601)
.+.+.|.....+.+.++.++++.++++.+++.++++++|.+|||||||||+||.+|+.+|++|+|||||+||||.+++++
T Consensus 98 ~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l 177 (235)
T COG1122 98 EDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRREL 177 (235)
T ss_pred HHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHH
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 470 WTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 470 ~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
+++++++.++ |+|||++|||++++..+|||+++|++|+++.+|+|.++.+.
T Consensus 178 ~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 178 LELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999887 79999999999999999999999999999999999988764
No 277
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-34 Score=284.91 Aligned_cols=180 Identities=24% Similarity=0.318 Sum_probs=157.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcccCCCCCHHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDALNDRLTPREHLE 394 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~~~lTv~E~L~ 394 (601)
.++++...-++.+.+++... ||++++++ ++.|.....|..+ ......+|||||++.++|++||+||+.
T Consensus 20 ~~i~L~v~~GEfvsilGpSG---cGKSTLLriiAGL~~p~~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~~NV~ 94 (248)
T COG1116 20 EDINLSVEKGEFVAILGPSG---CGKSTLLRLIAGLEKPTSGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVLDNVA 94 (248)
T ss_pred ccceeEECCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCccc--CCCCCCEEEEeccCcccchhhHHhhhe
Confidence 89999999999999998633 67776553 3334433333332 234567899999999999999999999
Q ss_pred HhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q psy7365 395 FYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIE 474 (601)
Q Consensus 395 ~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~ 474 (601)
|.....+.++.+.+++++++|+.+||.++.+++|++|||||||||+|||||+.+|++|+||||++.||..+|..+.+.+.
T Consensus 95 l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~ 174 (248)
T COG1116 95 LGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELL 174 (248)
T ss_pred ehhhccccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHH
Confidence 99888887777778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHh-CCcEEEEEccChhHHHhhCCEEEEEeCC
Q psy7365 475 RAVS-EGRCVILTSHNMEECEALCTKLTIMVNG 506 (601)
Q Consensus 475 ~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G 506 (601)
++.+ .++||+++|||++|+-.++|||++|.++
T Consensus 175 ~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 175 RLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 8754 5999999999999999999999999884
No 278
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4e-34 Score=272.82 Aligned_cols=213 Identities=21% Similarity=0.330 Sum_probs=181.7
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEcc-ccCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYD-HDIR 120 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g-~~~~ 120 (601)
.+..+++|+..||++. ||+|+||++.+ +||||| ||||+ +.+|+|-.+|+.|+|.++| .++.
T Consensus 4 ~iL~~~~vsVsF~GF~----Aln~ls~~v~~Gelr~lIGpNGA--GKTT~------mD~ItGKtrp~~G~v~f~g~~dl~ 71 (249)
T COG4674 4 IILYLDGVSVSFGGFK----ALNDLSFSVDPGELRVLIGPNGA--GKTTL------MDVITGKTRPQEGEVLFDGDTDLT 71 (249)
T ss_pred ceEEEeceEEEEccee----eeeeeEEEecCCeEEEEECCCCC--Cceee------eeeecccCCCCcceEEEcCchhhc
Confidence 4455899999999887 99999999988 999999 78887 7899999999999999999 7886
Q ss_pred C--chHHhcccEEEEccCCCCCCCCCHHHHHHHhHh--------hcCCChHHHHHHHHHHHHHcCCCcccCCccccCChH
Q psy7365 121 T--DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ--------LKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGG 190 (601)
Q Consensus 121 ~--~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~--------~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG 190 (601)
. .....|.+||.-||.|.+|..+||+||+..... ++.-...+-+.|++++|+..||.+.+++.+..||.|
T Consensus 72 ~~~e~~IAr~GIGRKFQ~PtVfe~ltV~eNLelA~~~~k~v~a~L~~r~~~~e~~ride~La~igL~~~~~~~A~~LSHG 151 (249)
T COG4674 72 KLPEHRIARAGIGRKFQKPTVFENLTVRENLELALNRDKSVFASLFARLRAEERRRIDELLATIGLGDERDRLAALLSHG 151 (249)
T ss_pred cCCHHHHHHhccCccccCCeehhhccHHHHHHHHhcCCcchHHHhhhhcChhHHHHHHHHHHHcccchhhhhhhhhhccc
Confidence 4 344467799999999999999999999976542 121223445678999999999999999999999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
|||++.|.. .+++
T Consensus 152 qKQwLEIGM--------------------------------------ll~Q----------------------------- 164 (249)
T COG4674 152 QKQWLEIGM--------------------------------------LLAQ----------------------------- 164 (249)
T ss_pred hhhhhhhhe--------------------------------------eecc-----------------------------
Confidence 999998532 1223
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
.|++|+||||++|+...+....-++|+.+. ...+|++++|||.|+..++++|-+|..|.+.+.|+-..
T Consensus 165 ------~P~lLLlDEPvAGMTd~Et~~taeLl~~la------~~hsilVVEHDM~Fvr~~A~~VTVlh~G~VL~EGsld~ 232 (249)
T COG4674 165 ------DPKLLLLDEPVAGMTDAETEKTAELLKSLA------GKHSILVVEHDMGFVREIADKVTVLHEGSVLAEGSLDE 232 (249)
T ss_pred ------CCcEEEecCccCCCcHHHHHHHHHHHHHHh------cCceEEEEeccHHHHHHhhheeEEEeccceeecccHHH
Confidence 369999999999999999999999999983 56899999999999999999999999999999886543
Q ss_pred c
Q psy7365 351 L 351 (601)
Q Consensus 351 L 351 (601)
.
T Consensus 233 v 233 (249)
T COG4674 233 V 233 (249)
T ss_pred h
Confidence 3
No 279
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=316.77 Aligned_cols=206 Identities=20% Similarity=0.289 Sum_probs=167.8
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+..+++++.. .+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|+++..
T Consensus 257 ~l~~~~~~~~--------~~l~~isl~i~~Ge~~~iiG~NGs--GKSTL------lk~l~G~~~p~~G~i~~~g~~~~~~ 320 (501)
T PRK11288 257 RLRLDGLKGP--------GLREPISFSVRAGEIVGLFGLVGA--GRSEL------MKLLYGATRRTAGQVYLDGKPIDIR 320 (501)
T ss_pred EEEEeccccC--------CcccceeEEEeCCcEEEEEcCCCC--CHHHH------HHHHcCCCcCCCceEEECCEECCCC
Confidence 4457777632 389999999988 999999 56665 679999999999999999998753
Q ss_pred -chHHhcccEEEEccCCC---CCCCCCHHHHHHHhHhhc----C--CChHHHHHHHHHHHHHcCCC-cccCCccccCChH
Q psy7365 122 -DMTTIRRSLGVCPQYNA---LFDKLTVEEHMWFYSQLK----Q--VPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGG 190 (601)
Q Consensus 122 -~~~~~~~~ig~v~Q~~~---~~~~~tv~e~l~~~~~~~----~--~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG 190 (601)
.....++.+||+||++. +|+.+|+.||+.++.... + .+....++++.++++.+|+. +..++++.+||||
T Consensus 321 ~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG 400 (501)
T PRK11288 321 SPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMNLSGG 400 (501)
T ss_pred CHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccccCCHH
Confidence 23345678999999973 899999999998754321 1 12233345688999999994 6789999999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
|||||++||++ +.
T Consensus 401 q~qrl~la~al--------------------------------------~~----------------------------- 413 (501)
T PRK11288 401 NQQKAILGRWL--------------------------------------SE----------------------------- 413 (501)
T ss_pred HHHHHHHHHHH--------------------------------------cc-----------------------------
Confidence 99999754432 22
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+|++|||||||+|||+.+++.++++|.++. ..|.|||++|||++++..+||++++|.+|+++..++.
T Consensus 414 ------~p~lllLDEPt~~LD~~~~~~l~~~l~~l~-----~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~ 480 (501)
T PRK11288 414 ------DMKVILLDEPTRGIDVGAKHEIYNVIYELA-----AQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAR 480 (501)
T ss_pred ------CCCEEEEcCCCCCCCHhHHHHHHHHHHHHH-----hCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEcc
Confidence 258999999999999999999999999883 3589999999999999999999999999998876644
No 280
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-34 Score=284.83 Aligned_cols=203 Identities=27% Similarity=0.363 Sum_probs=158.5
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.++++++.|++ ...+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. +.
T Consensus 4 ~~~~l~~~~~~---~~~~l~~isl~i~~G~~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 72 (229)
T cd03254 4 EFENVNFSYDE---KKPVLKDINFSIKPGETVAIVGPTGA--GKTTL------INLLMRFYDPQKGQILIDGIDIRDISR 72 (229)
T ss_pred EEEEEEEecCC---CCccccceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCcCCCCCEEEECCEeHHHcCH
Confidence 37899999852 23489999999988 999999 56665 679999999999999999988753 33
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHH-----HHHHHHHHc--CCCcccCCccccCChHHHhhhh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQL-----EISNMIGDL--GIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
...++.+||+||++.+|+. |+.||+.++.... ....... .+.+.++.+ |+....++.+.+||||||||++
T Consensus 73 ~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~ 149 (229)
T cd03254 73 KSLRSMIGVVLQDTFLFSG-TIMENIRLGRPNA--TDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLA 149 (229)
T ss_pred HHHhhhEEEecCCchhhhh-HHHHHHhccCCCC--CHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHH
Confidence 4457789999999988875 9999998764321 1111111 123344444 5666667788999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+||+|+ .+
T Consensus 150 la~al~--------------------------------------~~---------------------------------- 157 (229)
T cd03254 150 IARAML--------------------------------------RD---------------------------------- 157 (229)
T ss_pred HHHHHh--------------------------------------cC----------------------------------
Confidence 654332 22
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.++..+++.|+++ + +|+|||++||+++++. .||++++|.+|++...++
T Consensus 158 -p~llllDEP~~~LD~~~~~~l~~~l~~~-----~-~~~tii~~sh~~~~~~-~~d~i~~l~~g~~~~~~~ 220 (229)
T cd03254 158 -PKILILDEATSNIDTETEKLIQEALEKL-----M-KGRTSIIIAHRLSTIK-NADKILVLDDGKIIEEGT 220 (229)
T ss_pred -CCEEEEeCccccCCHHHHHHHHHHHHHh-----c-CCCEEEEEecCHHHHh-hCCEEEEEeCCeEEEeCC
Confidence 5899999999999999999999999987 2 4899999999999986 599999999999876553
No 281
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.4e-34 Score=281.49 Aligned_cols=192 Identities=25% Similarity=0.286 Sum_probs=159.5
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++...
T Consensus 3 l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~- 69 (207)
T PRK13539 3 LEGEDLACVRGG----RVLFSGLSFTLAAGEALVLTGPNGS--GKTTL------LRLIAGLLPPAAGTIKLDGGDIDDP- 69 (207)
T ss_pred EEEEeEEEEECC----eEEEeceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEeCcch-
Confidence 458999999864 3599999999988 999999 56655 6799999999999999999886422
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
. .++.++|++|.+.+++.+|+.||+.+.....+.. .+++.++++.+|+.+..++++++||||||||+++||++
T Consensus 70 ~-~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al-- 142 (207)
T PRK13539 70 D-VAEACHYLGHRNAMKPALTVAENLEFWAAFLGGE----ELDIAAALEAVGLAPLAHLPFGYLSAGQKRRVALARLL-- 142 (207)
T ss_pred h-hHhhcEEecCCCcCCCCCcHHHHHHHHHHhcCCc----HHHHHHHHHHcCCHHHHcCChhhcCHHHHHHHHHHHHH--
Confidence 2 5678999999988888999999998866544422 23578899999999888999999999999999854432
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |+++||
T Consensus 143 ------------------------------------~~~-----------------------------------p~llll 151 (207)
T PRK13539 143 ------------------------------------VSN-----------------------------------RPIWIL 151 (207)
T ss_pred ------------------------------------hcC-----------------------------------CCEEEE
Confidence 222 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecC
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAA 339 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~ 339 (601)
||||+|||+.++..+++.|+++. .+|+|+|++||+.+++.. |+++-+..
T Consensus 152 DEPt~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sH~~~~~~~--~~~~~~~~ 200 (207)
T PRK13539 152 DEPTAALDAAAVALFAELIRAHL-----AQGGIVIAATHIPLGLPG--ARELDLGP 200 (207)
T ss_pred eCCcccCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCchhhcc--CcEEeecC
Confidence 99999999999999999999873 358999999999999886 88877743
No 282
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.4e-34 Score=283.53 Aligned_cols=198 Identities=22% Similarity=0.311 Sum_probs=157.8
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.++++++.|+. ...++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +.
T Consensus 4 ~~~~l~~~~~~--~~~~~l~~i~~~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 73 (221)
T cd03244 4 EFKNVSLRYRP--NLPPVLKNISFSIKPGEKVGIVGRTGS--GKSSL------LLALFRLVELSSGSILIDGVDISKIGL 73 (221)
T ss_pred EEEEEEEecCC--CCcccccceEEEECCCCEEEEECCCCC--CHHHH------HHHHHcCCCCCCCEEEECCEEhHhCCH
Confidence 37899999853 234699999999988 999999 56665 579999999999999999998753 33
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcc-----------cCCccccCChHHH
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHK-----------RTSLANTLSGGMQ 192 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~ 192 (601)
...++.+||+||++.+|+ .|+.||+.++.. .. .+++.++++.+++.+. .++++.+|||||+
T Consensus 74 ~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~---~~----~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~ 145 (221)
T cd03244 74 HDLRSRISIIPQDPVLFS-GTIRSNLDPFGE---YS----DEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQR 145 (221)
T ss_pred HHHhhhEEEECCCCcccc-chHHHHhCcCCC---CC----HHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHH
Confidence 455778999999998775 599999975421 22 2344555666665543 3578999999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++||++ +.+
T Consensus 146 qr~~laral--------------------------------------~~~------------------------------ 157 (221)
T cd03244 146 QLLCLARAL--------------------------------------LRK------------------------------ 157 (221)
T ss_pred HHHHHHHHH--------------------------------------hcC------------------------------
Confidence 999864432 222
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|+++||||||+|||+.++..+++.|+++. ++.|+|++||+.+++.. ||++++|.+|++...+
T Consensus 158 -----p~llllDEP~~~LD~~~~~~l~~~l~~~~------~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~ 219 (221)
T cd03244 158 -----SKILVLDEATASVDPETDALIQKTIREAF------KDCTVLTIAHRLDTIID-SDRILVLDKGRVVEFD 219 (221)
T ss_pred -----CCEEEEeCccccCCHHHHHHHHHHHHHhc------CCCEEEEEeCCHHHHhh-CCEEEEEECCeEEecC
Confidence 58999999999999999999999999872 36899999999999875 9999999999987655
No 283
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.8e-33 Score=285.15 Aligned_cols=208 Identities=21% Similarity=0.259 Sum_probs=163.7
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCC--CCCeeEEEEccccCCC-
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGML--PVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~--~~~~G~v~~~g~~~~~- 121 (601)
.++||++.|+. .++++|+||++.+ +||||| ||||| .++|+|++ +|++|+|.++|.++..
T Consensus 3 ~~~nl~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~~~G~i~~~g~~~~~~ 70 (248)
T PRK09580 3 SIKDLHVSVED----KAILRGLNLEVRPGEVHAIMGPNGS--GKSTL------SATLAGREDYEVTGGTVEFKGKDLLEL 70 (248)
T ss_pred EEEEEEEEeCC----eeeeecceeEEcCCCEEEEECCCCC--CHHHH------HHHHcCCccCCCCceEEEECCCccccC
Confidence 47899999863 3599999999987 999999 56665 57999995 6999999999998753
Q ss_pred chH-HhcccEEEEccCCCCCCCCCHHHHHHHhHhhc---C----CChHHHHHHHHHHHHHcCCC-cccCCccc-cCChHH
Q psy7365 122 DMT-TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK---Q----VPKDLAQLEISNMIGDLGIP-HKRTSLAN-TLSGGM 191 (601)
Q Consensus 122 ~~~-~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~---~----~~~~~~~~~~~~~l~~~gl~-~~~~~~~~-~LSgG~ 191 (601)
+.. ..++.++|+||++.+++.+++.+++.+..... . ........++.++++.+++. +..++.+. +|||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~ 150 (248)
T PRK09580 71 SPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGE 150 (248)
T ss_pred CHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHH
Confidence 222 23457999999999888888777765432211 1 11223455678899999995 55677775 899999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++|||| +.+
T Consensus 151 ~qrv~laral--------------------------------------~~~----------------------------- 163 (248)
T PRK09580 151 KKRNDILQMA--------------------------------------VLE----------------------------- 163 (248)
T ss_pred HHHHHHHHHH--------------------------------------HcC-----------------------------
Confidence 9999865433 233
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhc-CCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLL-GDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l-~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+.+.|+++. ..|+|||++||+++++... ||++++|.+|+++..++.
T Consensus 164 ------p~illLDEPt~~LD~~~~~~l~~~l~~l~-----~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~ 230 (248)
T PRK09580 164 ------PELCILDESDSGLDIDALKIVADGVNSLR-----DGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDF 230 (248)
T ss_pred ------CCEEEEeCCCccCCHHHHHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCH
Confidence 58999999999999999999999998873 3588999999999999887 899999999998876643
No 284
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=287.98 Aligned_cols=186 Identities=19% Similarity=0.208 Sum_probs=158.5
Q ss_pred CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHHhcccEEEEccCC
Q psy7365 64 IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCPQYN 137 (601)
Q Consensus 64 ~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~Q~~ 137 (601)
....+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|. +++++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGs--GKSTL------lk~L~Gl~~p~~G~I~~~g~------------~~~~~~~~ 94 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGS--GKSTL------SNIIGGSLSPTVGKVDRNGE------------VSVIAISA 94 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCcCCCceEEEECCE------------EeEEeccc
Confidence 345689999999988 999999 56665 57999999999999999984 46778888
Q ss_pred CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhh
Q psy7365 138 ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAA 217 (601)
Q Consensus 138 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~ 217 (601)
.+++.+|+.||+.++....+.+.++....+.++++.+++.+..++++.+|||||+||+++|++|
T Consensus 95 ~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~Laral---------------- 158 (264)
T PRK13546 95 GLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRAKLGFSINI---------------- 158 (264)
T ss_pred CCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCcccCCHHHHHHHHHHHHH----------------
Confidence 7888899999998876655666666666778899999999999999999999999999754432
Q ss_pred hhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHH
Q psy7365 218 NNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRS 297 (601)
Q Consensus 218 ~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~ 297 (601)
+.+ |++|||||||+|||+.++..
T Consensus 159 ----------------------~~~-----------------------------------p~iLlLDEPt~gLD~~~~~~ 181 (264)
T PRK13546 159 ----------------------TVN-----------------------------------PDILVIDEALSVGDQTFAQK 181 (264)
T ss_pred ----------------------hhC-----------------------------------CCEEEEeCccccCCHHHHHH
Confidence 222 58999999999999999999
Q ss_pred HHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 298 IWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 298 l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+++.|.++. ..|+|+|++||+++++..+||++++|.+|++...++
T Consensus 182 l~~~L~~~~-----~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g~ 226 (264)
T PRK13546 182 CLDKIYEFK-----EQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYGE 226 (264)
T ss_pred HHHHHHHHH-----HCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeCC
Confidence 999998872 358999999999999999999999999999876553
No 285
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.1e-33 Score=277.67 Aligned_cols=188 Identities=26% Similarity=0.334 Sum_probs=154.8
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
+++|++.|++ .++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++......
T Consensus 3 ~~~l~~~~~~----~~~l~~vsl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 70 (198)
T TIGR01189 3 ARNLACSRGE----RMLFEGLSFTLNAGEALQVTGPNGI--GKTTL------LRILAGLLRPDSGEVRWNGTALAEQRDE 70 (198)
T ss_pred EEEEEEEECC----EEEEeeeeEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCccEEEECCEEcccchHH
Confidence 6889998864 4599999999988 999999 56665 5799999999999999999987543344
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.++|+||++.+|+.+|+.||+.++....+. + +.++.++++.+|+.+..++++.+||||||||+++||+++
T Consensus 71 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~--~--~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~--- 143 (198)
T TIGR01189 71 PHRNILYLGHLPGLKPELSALENLHFWAAIHGG--A--QRTIEDALAAVGLTGFEDLPAAQLSAGQQRRLALARLWL--- 143 (198)
T ss_pred hhhheEEeccCcccccCCcHHHHHHHHHHHcCC--c--HHHHHHHHHHcCCHHHhcCChhhcCHHHHHHHHHHHHHh---
Confidence 567899999999899899999999987654431 1 346788999999999899999999999999998654332
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
.+ |+++||||
T Consensus 144 -----------------------------------~~-----------------------------------p~llllDE 153 (198)
T TIGR01189 144 -----------------------------------SR-----------------------------------APLWILDE 153 (198)
T ss_pred -----------------------------------cC-----------------------------------CCEEEEeC
Confidence 22 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEE
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIA 335 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~ 335 (601)
||+|||+.++..+++.|.++. .+|.|+|++||+...+ .|+++.
T Consensus 154 Pt~~LD~~~~~~l~~~l~~~~-----~~~~tii~~sH~~~~~--~~~~~~ 196 (198)
T TIGR01189 154 PTTALDKAGVALLAGLLRAHL-----ARGGIVLLTTHQDLGL--VEAREL 196 (198)
T ss_pred CCcCCCHHHHHHHHHHHHHHH-----hCCCEEEEEEcccccc--cceEEe
Confidence 999999999999999999872 3588999999987444 456654
No 286
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.2e-33 Score=274.18 Aligned_cols=168 Identities=30% Similarity=0.423 Sum_probs=142.5
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..++++++.| +++++||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++...
T Consensus 4 ~l~~~~l~~~~--------~l~~vs~~i~~G~~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~ 67 (182)
T cd03215 4 VLEVRGLSVKG--------AVRDVSFEVRAGEIVGIAGLVGN--GQTEL------AEALFGLRPPASGEITLDGKPVTRR 67 (182)
T ss_pred EEEEeccEEEe--------eecceEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEECCcc
Confidence 34588999886 89999999988 999999 56665 6799999999999999999988542
Q ss_pred --hHHhcccEEEEccCC---CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhc
Q psy7365 123 --MTTIRRSLGVCPQYN---ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 123 --~~~~~~~ig~v~Q~~---~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
....++.++|+||++ .+++.+|++||+.++.. ||||||||+++
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~~~~t~~e~l~~~~~--------------------------------LS~G~~qrl~l 115 (182)
T cd03215 68 SPRDAIRAGIAYVPEDRKREGLVLDLSVAENIALSSL--------------------------------LSGGNQQKVVL 115 (182)
T ss_pred CHHHHHhCCeEEecCCcccCcccCCCcHHHHHHHHhh--------------------------------cCHHHHHHHHH
Confidence 234567899999996 47888999999977531 99999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
||||+ .+
T Consensus 116 a~al~--------------------------------------~~----------------------------------- 122 (182)
T cd03215 116 ARWLA--------------------------------------RD----------------------------------- 122 (182)
T ss_pred HHHHc--------------------------------------cC-----------------------------------
Confidence 54332 22
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
|+++||||||+|||+.+++.+++.|+++. .+|.|+|++||+++++.++||++++|.+|++
T Consensus 123 p~llllDEP~~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 123 PRVLILDEPTRGVDVGAKAEIYRLIRELA-----DAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCEEEECCCCcCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 58999999999999999999999999873 3489999999999999999999999999874
No 287
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=293.76 Aligned_cols=218 Identities=20% Similarity=0.286 Sum_probs=172.4
Q ss_pred eecCCCCCCccchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC---
Q psy7365 36 YVLPQDPASMGAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP--- 106 (601)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~--- 106 (601)
+..|+++... ++.+++|++.|+. ..+++|+||++.+ +||||| ||||| .++|+|+++
T Consensus 35 ~~~~~~~~~~---~l~i~nl~~~~~~----~~iL~~is~~i~~Ge~~~IvG~nGs--GKSTL------l~~L~Gl~~~~~ 99 (305)
T PRK14264 35 WTDYEFDGDA---KLSVEDLDVYYGD----DHALKGVSMDIPEKSVTALIGPSGC--GKSTF------LRCLNRMNDRIK 99 (305)
T ss_pred ccccccCCCc---eEEEEEEEEEeCC----eeeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhccccccC
Confidence 4555555322 4558999999864 3599999999988 999999 56665 579999986
Q ss_pred --CCeeEEEEccccCCC---chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc------------CCCh-HHHHHHHH
Q psy7365 107 --VSSGTAKIYDHDIRT---DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK------------QVPK-DLAQLEIS 168 (601)
Q Consensus 107 --~~~G~v~~~g~~~~~---~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~------------~~~~-~~~~~~~~ 168 (601)
|++|+|.++|.++.. .....++.+||+||++.+|+ .||+||+.|+.... +... .....++.
T Consensus 100 ~~p~~G~I~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (305)
T PRK14264 100 AARIDGSVELDGQDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVE 178 (305)
T ss_pred CCCCceEEEECCEEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHH
Confidence 689999999998753 23345678999999998887 59999999865322 1221 22356688
Q ss_pred HHHHHcCCC----cccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCc
Q psy7365 169 NMIGDLGIP----HKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPM 244 (601)
Q Consensus 169 ~~l~~~gl~----~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~ 244 (601)
++++.+++. +..++++.+||||||||+++||+| +++
T Consensus 179 ~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~LAraL--------------------------------------~~~-- 218 (305)
T PRK14264 179 RSLRQAALWDEVNDRLDDNALGLSGGQQQRLCIARCL--------------------------------------AVD-- 218 (305)
T ss_pred HHHHHcCCchhhhHHhcCccccCCHHHHHHHHHHHHH--------------------------------------hcC--
Confidence 999999884 456889999999999999865432 233
Q ss_pred chhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecch
Q psy7365 245 NLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYM 324 (601)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl 324 (601)
|++|||||||+|||+.++..++++|+++. . +.|+|++||++
T Consensus 219 ---------------------------------p~lLLLDEPtsgLD~~~~~~l~~~L~~~~-----~-~~tiiivtH~~ 259 (305)
T PRK14264 219 ---------------------------------PEVILMDEPASALDPIATSKIEDLIEELA-----E-EYTVVVVTHNM 259 (305)
T ss_pred ---------------------------------CCEEEEeCCcccCCHHHHHHHHHHHHHHh-----c-CCEEEEEEcCH
Confidence 58999999999999999999999999872 2 47999999999
Q ss_pred hHHHhcCCEE-EEecCCccccccCc
Q psy7365 325 DEADLLGDRI-AIIAAGKLQCCGSS 348 (601)
Q Consensus 325 ~~~~~l~Drv-~vL~~GkIv~~G~~ 348 (601)
+++..+||++ ++|.+|+++..+..
T Consensus 260 ~~i~~~~d~i~~~l~~G~i~~~g~~ 284 (305)
T PRK14264 260 QQAARISDQTAVFLTGGELVEYDDT 284 (305)
T ss_pred HHHHHhcCEEEEEecCCEEEEeCCH
Confidence 9999999997 56799999877653
No 288
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-34 Score=275.26 Aligned_cols=215 Identities=24% Similarity=0.285 Sum_probs=181.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
..+||++...+ +..++|+||+..+ +||||+ ||||| .|.|+|.+.|++|++.++|.++.. +.
T Consensus 3 ~a~nls~~~~G----r~ll~~vsl~~~pGev~ailGPNGA--GKSTl------Lk~LsGel~p~~G~v~~~g~~l~~~~~ 70 (259)
T COG4559 3 RAENLSYSLAG----RRLLDGVSLDLRPGEVLAILGPNGA--GKSTL------LKALSGELSPDSGEVTLNGVPLNSWPP 70 (259)
T ss_pred eeeeeEEEeec----ceeccCcceeccCCcEEEEECCCCc--cHHHH------HHHhhCccCCCCCeEeeCCcChhhCCH
Confidence 46788888643 4589999999998 999999 57665 679999999999999999999865 45
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCCh--HHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPK--DLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~--~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
.++.+.-+++||+..+-+.+||.|-+.++..-++... .+..+.++++|+..++.++..|...+|||||||||.+||||
T Consensus 71 ~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y~~LSGGEqQRVqlARvL 150 (259)
T COG4559 71 EELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDYRTLSGGEQQRVQLARVL 150 (259)
T ss_pred HHHHHHhhhcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccchhhcCchHHHHHHHHHHH
Confidence 5667778999999998778999999999887664333 34455578999999999999999999999999999987765
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+.- ..| ...+++|
T Consensus 151 aQl------------------------------------~~~-------------------------------v~~~r~L 163 (259)
T COG4559 151 AQL------------------------------------WPP-------------------------------VPSGRWL 163 (259)
T ss_pred HHc------------------------------------cCC-------------------------------CCCCceE
Confidence 422 222 1125699
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
+||||||+||+..+..++.+.+++. .+|..|+.+-||++.+..+|||+++|.+|+++++|++.
T Consensus 164 ~LDEPtsaLDi~HQ~~tl~laR~la-----~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~ 226 (259)
T COG4559 164 FLDEPTSALDIAHQHHTLRLARQLA-----REGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQ 226 (259)
T ss_pred EecCCccccchHHHHHHHHHHHHHH-----hcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHH
Confidence 9999999999999999999999883 46788999999999999999999999999999999874
No 289
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-33 Score=271.72 Aligned_cols=165 Identities=38% Similarity=0.701 Sum_probs=141.8
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
++++++.|+. .++++++||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++......
T Consensus 3 ~~~l~~~~~~----~~~l~~~~~~i~~Ge~~~i~G~nGs--GKStL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 70 (173)
T cd03230 3 VRNLSKRYGK----KTALDDISLTVEKGEIYGLLGPNGA--GKTTL------IKIILGLLKPDSGEIKVLGKDIKKEPEE 70 (173)
T ss_pred EEEEEEEECC----eeeeeeeEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEECCEEcccchHh
Confidence 6889998853 3599999999988 999999 56665 5799999999999999999987543345
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
.++.++|+||++.+|+.+|+.||+. |||||+||+++||++
T Consensus 71 ~~~~i~~~~q~~~~~~~~tv~~~~~------------------------------------LS~G~~qrv~laral---- 110 (173)
T cd03230 71 VKRRIGYLPEEPSLYENLTVRENLK------------------------------------LSGGMKQRLALAQAL---- 110 (173)
T ss_pred hhccEEEEecCCccccCCcHHHHhh------------------------------------cCHHHHHHHHHHHHH----
Confidence 5678999999999999999999984 999999999865432
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+. +|+++||||
T Consensus 111 ----------------------------------~~-----------------------------------~p~illlDE 121 (173)
T cd03230 111 ----------------------------------LH-----------------------------------DPELLILDE 121 (173)
T ss_pred ----------------------------------Hc-----------------------------------CCCEEEEeC
Confidence 22 258999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
||++||+.++..+++.|+++. .+|.|+|++||+.+++...||++++|.+|++
T Consensus 122 Pt~~LD~~~~~~l~~~l~~~~-----~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 122 PTSGLDPESRREFWELLRELK-----KEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred CccCCCHHHHHHHHHHHHHHH-----HCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 999999999999999999873 2488999999999999999999999999874
No 290
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.3e-33 Score=295.03 Aligned_cols=323 Identities=23% Similarity=0.307 Sum_probs=228.2
Q ss_pred ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-------------chHHhc---ccEEEEccC----CC
Q psy7365 79 LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-------------DMTTIR---RSLGVCPQY----NA 138 (601)
Q Consensus 79 ~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-------------~~~~~~---~~ig~v~Q~----~~ 138 (601)
+||||. |||| . .++|+|.+.|.=|.- ++.+-.. .-..+. -++..=||. |.
T Consensus 106 lG~NGi--GKsT-----a-lkILaGel~PNLG~~--~~pp~wdeVi~~FrGtELq~YF~~l~~g~~r~v~K~QYVd~iPk 175 (591)
T COG1245 106 LGPNGI--GKST-----A-LKILAGELKPNLGRY--EDPPSWDEVIKRFRGTELQNYFKKLYEGELRAVHKPQYVDLIPK 175 (591)
T ss_pred EcCCCc--cHHH-----H-HHHHhCccccCCCCC--CCCCCHHHHHHHhhhhHHHHHHHHHHcCCcceecchHHHHHHHH
Confidence 899998 4554 4 579999999976653 2211100 000111 123333454 22
Q ss_pred CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhh
Q psy7365 139 LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAAN 218 (601)
Q Consensus 139 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~ 218 (601)
.+.. +|.|-+.-.. -+-+.+++++.++|+...+|.+++|||||-||++| |+++
T Consensus 176 ~~KG-~v~elLk~~d---------e~g~~devve~l~L~nvl~r~v~~LSGGELQr~aI-----------aa~l------ 228 (591)
T COG1245 176 VVKG-KVGELLKKVD---------ERGKFDEVVERLGLENVLDRDVSELSGGELQRVAI-----------AAAL------ 228 (591)
T ss_pred Hhcc-hHHHHHHhhh---------hcCcHHHHHHHhcchhhhhhhhhhcCchHHHHHHH-----------HHHH------
Confidence 2222 6665543211 11256889999999999999999999999999984 3321
Q ss_pred hhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHH
Q psy7365 219 NVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSI 298 (601)
Q Consensus 219 ~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l 298 (601)
. ..++++++|||||-||..+|-.+
T Consensus 229 ---------------------~-----------------------------------rdADvY~FDEpsSyLDi~qRl~~ 252 (591)
T COG1245 229 ---------------------L-----------------------------------RDADVYFFDEPSSYLDIRQRLNA 252 (591)
T ss_pred ---------------------h-----------------------------------ccCCEEEEcCCcccccHHHHHHH
Confidence 1 12599999999999999999999
Q ss_pred HHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecC-----Cccccc------------c-----------Cccc
Q psy7365 299 WELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAA-----GKLQCC------------G-----------SSVF 350 (601)
Q Consensus 299 ~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~-----GkIv~~------------G-----------~~~l 350 (601)
-.+++++. ..+++|++++||+..+..++|.|.++-. |-+..- | .+..
T Consensus 253 ar~Irel~-----~~~k~ViVVEHDLavLD~lsD~vhI~YG~pg~YGvvs~p~svr~gIN~yL~Gyl~~EN~R~R~~~I~ 327 (591)
T COG1245 253 ARVIRELA-----EDGKYVIVVEHDLAVLDYLSDFVHILYGEPGVYGVVSKPKSVRVGINEYLKGYLPEENVRFRPEEIE 327 (591)
T ss_pred HHHHHHHh-----ccCCeEEEEechHHHHHHhhheeEEEecCCccceEeccchHHHHHHHHHHhccCchhccccccccee
Confidence 99999983 3489999999999999999999998842 222100 0 0000
Q ss_pred c--------------------ccccc------------ccccc---ccc--------------cCCc---ccccccccCC
Q psy7365 351 L--------------------KNSFA------------RGYYL---SLD--------------MKSA---PQKSYIGYCP 378 (601)
Q Consensus 351 L--------------------k~~~g------------~g~~i---gld--------------~~~~---~~~~~ig~v~ 378 (601)
+ +.+.+ .+-++ |-+ .++. ...-+++|-|
T Consensus 328 F~~~~~~~~~~~~~lv~y~~~~k~~g~F~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~~~~~~vSyKP 407 (591)
T COG1245 328 FEEKPPRDDKARDTLVEYPDLKKTYGDFKLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGSEEDLKVSYKP 407 (591)
T ss_pred eeccCcccccccceeeecchheeecCceEEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCCCccceEeecc
Confidence 0 00000 00000 000 0001 2235689999
Q ss_pred CCcccCCCCCHHHHHHHhHHh-cCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECC
Q psy7365 379 QFDALNDRLTPREHLEFYSRV-RNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEP 457 (601)
Q Consensus 379 Q~~~l~~~lTv~E~L~~~~~~-~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEP 457 (601)
|.-.--.+.||.+.+.-.... ++-+ -...++++-++|.+..++++..||||+.|||+||.||..++++++||||
T Consensus 408 QyI~~~~~gtV~~~l~~~~~~~~~~s-----~~~~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEP 482 (591)
T COG1245 408 QYISPDYDGTVEDLLRSAIRSAFGSS-----YFKTEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEP 482 (591)
T ss_pred eeecCCCCCcHHHHHHHhhhhhcccc-----hhHHhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCc
Confidence 976555678999987654332 1111 1235678889999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEe
Q psy7365 458 TSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMV 504 (601)
Q Consensus 458 TsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~ 504 (601)
++-||.+.|-.+.+.|+++.++ ++|.+++-||+-.+..++||+++..
T Consensus 483 SA~LDvEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~ 530 (591)
T COG1245 483 SAYLDVEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFE 530 (591)
T ss_pred hhhccHHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEe
Confidence 9999999999999999998765 8999999999999999999999875
No 291
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-33 Score=277.61 Aligned_cols=189 Identities=20% Similarity=0.272 Sum_probs=156.5
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|+++|.++.....
T Consensus 3 ~~~~l~~~~~~----~~il~~~s~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~G~~~~~~G~v~~~g~~~~~~~~ 70 (200)
T PRK13540 3 DVIELDFDYHD----QPLLQQISFHLPAGGLLHLKGSNGA--GKTTL------LKLIAGLLNPEKGEILFERQSIKKDLC 70 (200)
T ss_pred EEEEEEEEeCC----eeEEeeeeEEECCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCeeEEECCCccccCHH
Confidence 47899999863 4599999999988 999999 56655 579999999999999999998865444
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.+||+||++.+++.+||.||+.|+.... .. ..++.++++.+++.+..++++.+||||||||+++||++
T Consensus 71 ~~~~~i~~~~q~~~~~~~~tv~~~~~~~~~~~---~~--~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral--- 142 (200)
T PRK13540 71 TYQKQLCFVGHRSGINPYLTLRENCLYDIHFS---PG--AVGITELCRLFSLEHLIDYPCGLLSSGQKRQVALLRLW--- 142 (200)
T ss_pred HHHhheEEeccccccCcCCCHHHHHHHHHhcC---cc--hHHHHHHHHHcCCchhhhCChhhcCHHHHHHHHHHHHH---
Confidence 56778999999999999999999999864321 11 24678999999999888999999999999999864432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 143 -----------------------------------~~~-----------------------------------p~~lilD 152 (200)
T PRK13540 143 -----------------------------------MSK-----------------------------------AKLWLLD 152 (200)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEe
Confidence 233 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEE
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIA 335 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~ 335 (601)
|||+|||+.++..+++.|+++. ..|.|+|++||+.+.+.. ||.-+
T Consensus 153 EP~~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sh~~~~~~~-~d~~~ 197 (200)
T PRK13540 153 EPLVALDELSLLTIITKIQEHR-----AKGGAVLLTSHQDLPLNK-ADYEE 197 (200)
T ss_pred CCCcccCHHHHHHHHHHHHHHH-----HcCCEEEEEeCCchhccc-cchhh
Confidence 9999999999999999999872 358999999999887754 77543
No 292
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-33 Score=282.92 Aligned_cols=202 Identities=28% Similarity=0.410 Sum_probs=159.0
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
++++++.|++ ...+++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +..
T Consensus 3 ~~~l~~~~~~---~~~~l~~i~~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~Gl~~~~~G~v~~~g~~~~~~~~~ 71 (236)
T cd03253 3 FENVTFAYDP---GRPVLKDVSFTIPAGKKVAIVGPSGS--GKSTI------LRLLFRFYDVSSGSILIDGQDIREVTLD 71 (236)
T ss_pred EEEEEEEeCC---CCceeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccCCCCCEEEECCEEhhhCCHH
Confidence 6889998742 24589999999988 999999 56665 579999999999999999998753 344
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHH-----HHHHHHHHc--CCCcccCCccccCChHHHhhhhc
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQL-----EISNMIGDL--GIPHKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~~~ 197 (601)
..++.+||+||++.+|+ .|+.||+.++... .+...... .+.+.++.+ |+....++++.+||||||||+++
T Consensus 72 ~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~--~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~l 148 (236)
T cd03253 72 SLRRAIGVVPQDTVLFN-DTIGYNIRYGRPD--ATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAI 148 (236)
T ss_pred HHHhhEEEECCCChhhc-chHHHHHhhcCCC--CCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHH
Confidence 55678999999998885 7999999886432 22222111 123344444 55666777899999999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
||+|+ .+
T Consensus 149 a~aL~--------------------------------------~~----------------------------------- 155 (236)
T cd03253 149 ARAIL--------------------------------------KN----------------------------------- 155 (236)
T ss_pred HHHHh--------------------------------------cC-----------------------------------
Confidence 54332 22
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
|+++||||||+|||+.++..++++|.++ +. |+|||++||+.+++.. ||++++|.+|++...++
T Consensus 156 p~llllDEP~~~LD~~~~~~l~~~l~~~-----~~-~~tiii~sh~~~~~~~-~d~~~~l~~g~i~~~~~ 218 (236)
T cd03253 156 PPILLLDEATSALDTHTEREIQAALRDV-----SK-GRTTIVIAHRLSTIVN-ADKIIVLKDGRIVERGT 218 (236)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHh-----cC-CCEEEEEcCCHHHHHh-CCEEEEEECCEEEeeCC
Confidence 5899999999999999999999999987 23 8999999999999965 99999999999876654
No 293
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.3e-34 Score=298.13 Aligned_cols=201 Identities=24% Similarity=0.395 Sum_probs=174.5
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc-cccccccCCCCcccCC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP-QKSYIGYCPQFDALND 385 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~-~~~~ig~v~Q~~~l~~ 385 (601)
+.+++ +|++.-..-++.+.+++... ||+++.++ ++.|+.++.|.++...+ .+|.||+|||+..+||
T Consensus 17 ~~~av---~~isl~i~~Gef~~lLGPSG---cGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFP 90 (352)
T COG3842 17 DFTAV---DDISLDIKKGEFVTLLGPSG---CGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMVFQSYALFP 90 (352)
T ss_pred CeeEE---ecceeeecCCcEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccceeecCcccCC
Confidence 34444 89999999999999998632 67666553 34455555566655443 4788999999999999
Q ss_pred CCCHHHHHHHhHHhcC-CChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 386 RLTPREHLEFYSRVRN-LPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g-~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+|||+||+.|..+..+ .+..+.++++.++|+.++|.++.+++|.+|||||||||+|||||+.+|++|+||||.|+||..
T Consensus 91 HltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~k 170 (352)
T COG3842 91 HMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAK 170 (352)
T ss_pred CCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHH
Confidence 9999999999988554 344557789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
-|.++...++++.++ |.|.|++|||-+|+..++|||++|++|+|...|+|+++-.+
T Consensus 171 LR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 171 LREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999998765 99999999999999999999999999999999999998553
No 294
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-34 Score=275.47 Aligned_cols=212 Identities=24% Similarity=0.277 Sum_probs=185.7
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.+++++|.|++.- +|+|+|+++++ +||||| ||||| .++++.|+++++|+|+++|.++.. +
T Consensus 2 I~i~nv~K~y~~~~----vl~~isl~i~~g~iTs~IGPNGA--GKSTL------LS~~sRL~~~d~G~i~i~g~~~~~~~ 69 (252)
T COG4604 2 ITIENVSKSYGTKV----VLDDVSLDIPKGGITSIIGPNGA--GKSTL------LSMMSRLLKKDSGEITIDGLELTSTP 69 (252)
T ss_pred eeehhhhHhhCCEE----eeccceeeecCCceeEEECCCCc--cHHHH------HHHHHHhccccCceEEEeeeecccCC
Confidence 45899999987654 99999999988 999999 67766 679999999999999999999974 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc--CCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK--QVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
...+.+.+..+-|.+..-..+||+|-+.|+..-| |-+..+.+..++++++.++|++..+|+..+||||||||.-+|.|
T Consensus 70 s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryLd~LSGGQrQRAfIAMV 149 (252)
T COG4604 70 SKELAKKLSILKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYLDELSGGQRQRAFIAMV 149 (252)
T ss_pred hHHHHHHHHHHHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhHHhcccchhhhhhhhee
Confidence 6678889999999999888999999999986544 55567778889999999999999999999999999999765444
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
++.| .+.
T Consensus 150 laQd-------------------------------------------------------------------------Tdy 156 (252)
T COG4604 150 LAQD-------------------------------------------------------------------------TDY 156 (252)
T ss_pred eecc-------------------------------------------------------------------------CcE
Confidence 3322 489
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
++||||.++||......++++|+++.. +-|+||+++-||++++..++|.|+-|.+|+++..|++..
T Consensus 157 vlLDEPLNNLDmkHsv~iMk~Lrrla~----el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~e 222 (252)
T COG4604 157 VLLDEPLNNLDMKHSVQIMKILRRLAD----ELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDE 222 (252)
T ss_pred EEecCcccccchHHHHHHHHHHHHHHH----HhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHH
Confidence 999999999999999999999999853 459999999999999999999999999999999997643
No 295
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=3e-33 Score=274.21 Aligned_cols=178 Identities=29% Similarity=0.422 Sum_probs=147.9
Q ss_pred hhcccccccccCC--CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCC--CCCeeEEEEccccCC
Q psy7365 51 LFESLSENRDKLG--IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGML--PVSSGTAKIYDHDIR 120 (601)
Q Consensus 51 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~--~~~~G~v~~~g~~~~ 120 (601)
.+++|++.|+... ...++++|+||++.+ +||||+ ||||| .++|+|++ +|++|+|.++|+++.
T Consensus 5 ~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGs--GKStL------l~~i~Gl~~~~~~~G~i~~~g~~~~ 76 (194)
T cd03213 5 SFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGA--GKSTL------LNALAGRRTGLGVSGEVLINGRPLD 76 (194)
T ss_pred EEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCCceEEEECCEeCc
Confidence 4889999986420 125699999999988 999999 57665 67999999 999999999999885
Q ss_pred CchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 121 TDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 121 ~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
. ...++.++|+||++.+|+.+|+.||+.++.... +||||||||+++||+
T Consensus 77 ~--~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-----------------------------~LS~G~~qrv~lara 125 (194)
T cd03213 77 K--RSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-----------------------------GLSGGERKRVSIALE 125 (194)
T ss_pred h--HhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-----------------------------cCCHHHHHHHHHHHH
Confidence 3 245678999999999999999999997643210 899999999975443
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 126 l--------------------------------------~~~-----------------------------------p~i 132 (194)
T cd03213 126 L--------------------------------------VSN-----------------------------------PSL 132 (194)
T ss_pred H--------------------------------------HcC-----------------------------------CCE
Confidence 2 232 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchh-HHHhcCCEEEEecCCccccc
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMD-EADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~-~~~~l~Drv~vL~~GkIv~~ 345 (601)
+||||||+|||+.+++.++++|+++. .+|+|+|++||+++ ++...||++++|.+|++...
T Consensus 133 lllDEP~~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~ 193 (194)
T cd03213 133 LFLDEPTSGLDSSSALQVMSLLRRLA-----DTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYF 193 (194)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHH-----hCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEec
Confidence 99999999999999999999999873 34899999999997 78889999999999997643
No 296
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-33 Score=273.82 Aligned_cols=178 Identities=27% Similarity=0.280 Sum_probs=146.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCC--CCCeeEEEEccccCCC
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGML--PVSSGTAKIYDHDIRT 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~--~~~~G~v~~~g~~~~~ 121 (601)
..++++++.|+......++++|+||++.+ +||||| ||||| .++|+|+. +|++|+|.++|+++.
T Consensus 4 l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~~~~G~i~~~g~~~~- 74 (192)
T cd03232 4 LTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGA--GKTTL------LDVLAGRKTAGVITGEILINGRPLD- 74 (192)
T ss_pred EEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCC--CHHHH------HHHHhCCCcCCCcceEEEECCEehH-
Confidence 34899999986432235699999999988 999999 57665 67999986 489999999999874
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
...++.++|+||++.+|+.+|++||+.+.... + +|||||+||+++||+|
T Consensus 75 --~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~----------------~-------------~LSgGe~qrv~la~al 123 (192)
T cd03232 75 --KNFQRSTGYVEQQDVHSPNLTVREALRFSALL----------------R-------------GLSVEQRKRLTIGVEL 123 (192)
T ss_pred --HHhhhceEEecccCccccCCcHHHHHHHHHHH----------------h-------------cCCHHHhHHHHHHHHH
Confidence 34567899999999999999999999874311 0 8999999999864432
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+ . +|+++
T Consensus 124 ~--------------------------------------~-----------------------------------~p~vl 130 (192)
T cd03232 124 A--------------------------------------A-----------------------------------KPSIL 130 (192)
T ss_pred h--------------------------------------c-----------------------------------CCcEE
Confidence 2 2 25899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchh-HHHhcCCEEEEecC-Cccccc
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMD-EADLLGDRIAIIAA-GKLQCC 345 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~-~~~~l~Drv~vL~~-GkIv~~ 345 (601)
||||||+|||+.++..+++.|+++. ..|+|+|++||+++ ++...||++++|.+ |+++..
T Consensus 131 llDEP~~~LD~~~~~~l~~~l~~~~-----~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~ 191 (192)
T cd03232 131 FLDEPTSGLDSQAAYNIVRFLKKLA-----DSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYF 191 (192)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHH-----HcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeC
Confidence 9999999999999999999999872 35899999999998 47889999999998 988654
No 297
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.1e-33 Score=297.39 Aligned_cols=196 Identities=19% Similarity=0.264 Sum_probs=169.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc---c----ccccccCCCCcccCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP---Q----KSYIGYCPQFDALNDRL 387 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~---~----~~~ig~v~Q~~~l~~~l 387 (601)
+++++-..-++.+++++... +|++++++ ++.|+.++.+.++.... . ++.+|||||++.+|+++
T Consensus 10 ~~vs~~i~~Gei~~l~G~sG---sGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 10 NDADLAIAKGEIFVIMGLSG---SGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred EeeEEEEcCCCEEEEECCCC---ChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 89999999999999998532 55555432 34455555554443221 1 56899999999999999
Q ss_pred CHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 388 TPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 388 Tv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
||+||+.|...+.+.+..+..+++.++++.++|.++.++++.+|||||||||+|||||+.+|++|||||||+||||.+++
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~ 166 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRD 166 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 99999999877777766667788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 468 FLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 468 ~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
.+.+.+.++.++ |+|||++|||++++..+||||++|++|+++..|+++++...
T Consensus 167 ~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 167 SMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999755 89999999999999999999999999999999999998653
No 298
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=311.57 Aligned_cols=208 Identities=19% Similarity=0.274 Sum_probs=167.0
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
..++.++||++.+ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.
T Consensus 248 ~~~i~~~~l~~~~------~~~l~~vsl~i~~Ge~~~l~G~nGs--GKSTL------l~~l~Gl~~p~~G~i~~~g~~i~ 313 (491)
T PRK10982 248 EVILEVRNLTSLR------QPSIRDVSFDLHKGEILGIAGLVGA--KRTDI------VETLFGIREKSAGTITLHGKKIN 313 (491)
T ss_pred CcEEEEeCccccc------CcccceeeEEEeCCcEEEEecCCCC--CHHHH------HHHHcCCCcCCccEEEECCEECC
Confidence 3466799999873 2389999999988 999999 57665 57999999999999999999885
Q ss_pred Cc--hHHhcccEEEEccCC---CCCCCCCHHHHH-----HHhHhhcCC-ChHHHHHHHHHHHHHcCCC-cccCCccccCC
Q psy7365 121 TD--MTTIRRSLGVCPQYN---ALFDKLTVEEHM-----WFYSQLKQV-PKDLAQLEISNMIGDLGIP-HKRTSLANTLS 188 (601)
Q Consensus 121 ~~--~~~~~~~ig~v~Q~~---~~~~~~tv~e~l-----~~~~~~~~~-~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LS 188 (601)
.. ....++.+||+||++ .+|+++|+.+|+ .++...++. +....+.++.++++.+++. +..++++.+||
T Consensus 314 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS 393 (491)
T PRK10982 314 NHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLS 393 (491)
T ss_pred CCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccccccCC
Confidence 32 233466799999995 478889888773 322222232 3344556788999999996 56899999999
Q ss_pred hHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHH
Q psy7365 189 GGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVT 268 (601)
Q Consensus 189 gG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~ 268 (601)
||||||+++||++ +.+
T Consensus 394 gGq~qrv~la~al--------------------------------------~~~-------------------------- 409 (491)
T PRK10982 394 GGNQQKVIIGRWL--------------------------------------LTQ-------------------------- 409 (491)
T ss_pred cHHHHHHHHHHHH--------------------------------------hcC--------------------------
Confidence 9999999754332 222
Q ss_pred HHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 269 VLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 269 ~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|++|||||||+|||+.++..++++|.++. ..|.|||++|||++++..+|||+++|.+|+++..+
T Consensus 410 ---------p~illLDEPt~gLD~~~~~~~~~~l~~l~-----~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~ 473 (491)
T PRK10982 410 ---------PEILMLDEPTRGIDVGAKFEIYQLIAELA-----KKDKGIIIISSEMPELLGITDRILVMSNGLVAGIV 473 (491)
T ss_pred ---------CCEEEEcCCCcccChhHHHHHHHHHHHHH-----HCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEE
Confidence 58999999999999999999999999873 35899999999999999999999999999987544
No 299
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-33 Score=297.29 Aligned_cols=200 Identities=22% Similarity=0.333 Sum_probs=169.6
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccCC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALND 385 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~~ 385 (601)
+++++ +++++...-++.+++++... +|++++++ +..|+.++.+.++.. .+.++.|||+||++.+|+
T Consensus 16 ~~~~l---~~vsl~i~~Ge~~~llG~sG---sGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp 89 (356)
T PRK11650 16 KTQVI---KGIDLDVADGEFIVLVGPSG---CGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVFQNYALYP 89 (356)
T ss_pred CCEEE---eeeeEEEcCCCEEEEECCCC---CcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCccccC
Confidence 45555 88898888999999997522 55555443 333444444444332 223578999999999999
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHH
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGA 465 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~ 465 (601)
++||+||+.|..+.++.+..+..++++++++.++|.++.++++.+|||||||||+|||||+.+|++|||||||++||+.+
T Consensus 90 ~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~ 169 (356)
T PRK11650 90 HMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKL 169 (356)
T ss_pred CCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 99999999998776666666666789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 466 RRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 466 ~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+..+++.|+++.++ |.|+|++|||++++..+|||+++|++|+++..|+++++.+
T Consensus 170 r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~ 224 (356)
T PRK11650 170 RVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYE 224 (356)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHh
Confidence 99999999998765 9999999999999999999999999999999999999854
No 300
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.7e-33 Score=312.55 Aligned_cols=208 Identities=24% Similarity=0.336 Sum_probs=166.9
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccC
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDI 119 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~ 119 (601)
+..+..+++|++ .+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++
T Consensus 265 ~~~~l~~~~l~~---------~~l~~isl~i~~Ge~~~l~G~NGs--GKSTL------l~~i~Gl~~p~~G~i~~~g~~i 327 (510)
T PRK15439 265 GAPVLTVEDLTG---------EGFRNISLEVRAGEILGLAGVVGA--GRTEL------AETLYGLRPARGGRIMLNGKEI 327 (510)
T ss_pred CCceEEEeCCCC---------CCccceeEEEcCCcEEEEECCCCC--CHHHH------HHHHcCCCCCCCcEEEECCEEC
Confidence 344566888883 159999999988 999999 57665 6799999999999999999987
Q ss_pred CCc-h-HHhcccEEEEccCC---CCCCCCCHHHHHHHhHh--h-cCCChHHHHHHHHHHHHHcCCC-cccCCccccCChH
Q psy7365 120 RTD-M-TTIRRSLGVCPQYN---ALFDKLTVEEHMWFYSQ--L-KQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGG 190 (601)
Q Consensus 120 ~~~-~-~~~~~~ig~v~Q~~---~~~~~~tv~e~l~~~~~--~-~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG 190 (601)
... . ...++++||+||++ .+|+.+|+.+|+.+... . ........+.++.++++.+|++ +..++++++||||
T Consensus 328 ~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG 407 (510)
T PRK15439 328 NALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAARTLSGG 407 (510)
T ss_pred CCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCccccCCcH
Confidence 532 2 22456899999985 48889999999864321 1 1112233345688999999997 7889999999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
||||+++||++ +.+
T Consensus 408 ~kqrl~la~al--------------------------------------~~~---------------------------- 421 (510)
T PRK15439 408 NQQKVLIAKCL--------------------------------------EAS---------------------------- 421 (510)
T ss_pred HHHHHHHHHHH--------------------------------------hhC----------------------------
Confidence 99999754432 222
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++|||||||+|||+.+++.++++|+++. .+|.|||++|||++++..+||++++|.+|+++..++.
T Consensus 422 -------p~lLlLDEPt~gLD~~~~~~l~~~l~~l~-----~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~ 487 (510)
T PRK15439 422 -------PQLLIVDEPTRGVDVSARNDIYQLIRSIA-----AQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTG 487 (510)
T ss_pred -------CCEEEECCCCcCcChhHHHHHHHHHHHHH-----hCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcc
Confidence 58999999999999999999999999883 3589999999999999999999999999998876543
No 301
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.2e-33 Score=275.26 Aligned_cols=192 Identities=22% Similarity=0.257 Sum_probs=153.5
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..++++++.|+.. ..++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. +
T Consensus 7 l~~~~l~~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~~~g~~~~~~~ 76 (207)
T cd03369 7 IEVENLSVRYAPD--LPPVLKNVSFKVKAGEKIGIVGRTGA--GKSTL------ILALFRFLEAEEGKIEIDGIDISTIP 76 (207)
T ss_pred EEEEEEEEEeCCC--CcccccCceEEECCCCEEEEECCCCC--CHHHH------HHHHhcccCCCCCeEEECCEEhHHCC
Confidence 4489999998542 23699999999988 999999 56665 579999999999999999998743 3
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
....++.+||+||++.+|+ .|+.||+.++. ..+. .++.++++ .++++.+|||||+||+++||+|+
T Consensus 77 ~~~~~~~i~~v~q~~~~~~-~tv~~~l~~~~---~~~~----~~~~~~l~-------~~~~~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 77 LEDLRSSLTIIPQDPTLFS-GTIRSNLDPFD---EYSD----EEIYGALR-------VSEGGLNLSQGQRQLLCLARALL 141 (207)
T ss_pred HHHHHhhEEEEecCCcccC-ccHHHHhcccC---CCCH----HHHHHHhh-------ccCCCCcCCHHHHHHHHHHHHHh
Confidence 3345678999999998886 59999997642 1222 22334443 36789999999999998654332
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
.+ |+++|
T Consensus 142 --------------------------------------~~-----------------------------------p~lll 148 (207)
T cd03369 142 --------------------------------------KR-----------------------------------PRVLV 148 (207)
T ss_pred --------------------------------------hC-----------------------------------CCEEE
Confidence 22 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|||||+|||+.++..++++|+++ . +|.|+|++||+++++.. ||++++|.+|++...+
T Consensus 149 lDEP~~~LD~~~~~~l~~~l~~~-----~-~~~tiii~th~~~~~~~-~d~v~~l~~g~i~~~g 205 (207)
T cd03369 149 LDEATASIDYATDALIQKTIREE-----F-TNSTILTIAHRLRTIID-YDKILVMDAGEVKEYD 205 (207)
T ss_pred EeCCcccCCHHHHHHHHHHHHHh-----c-CCCEEEEEeCCHHHHhh-CCEEEEEECCEEEecC
Confidence 99999999999999999999986 2 48999999999999876 9999999999987655
No 302
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.8e-33 Score=285.30 Aligned_cols=192 Identities=24% Similarity=0.374 Sum_probs=156.7
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD 122 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~ 122 (601)
+..+++|++.|++ ..+++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~----~~vl~~vs~~i~~Ge~~~I~G~NGs--GKSTL------l~~i~Gl~~p~~G~i~~~~------ 65 (251)
T PRK09544 4 LVSLENVSVSFGQ----RRVLSDVSLELKPGKILTLLGPNGA--GKSTL------VRVVLGLVAPDEGVIKRNG------ 65 (251)
T ss_pred EEEEeceEEEECC----ceEEEeEEEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECC------
Confidence 3458999999864 3599999999988 999999 56665 6799999999999999986
Q ss_pred hHHhcccEEEEccCCCCCCC--CCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDK--LTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKV 200 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~--~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~ 200 (601)
+..++|+||++.+++. .|+.+++.+.. +.+ .+++.++++.+|+.+..++++.+||||||||+++|++
T Consensus 66 ----~~~i~~v~q~~~~~~~l~~~~~~~~~~~~---~~~----~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~lara 134 (251)
T PRK09544 66 ----KLRIGYVPQKLYLDTTLPLTVNRFLRLRP---GTK----KEDILPALKRVQAGHLIDAPMQKLSGGETQRVLLARA 134 (251)
T ss_pred ----ccCEEEeccccccccccChhHHHHHhccc---ccc----HHHHHHHHHHcCChHHHhCChhhCCHHHHHHHHHHHH
Confidence 2369999999987765 47787765421 222 3457789999999999999999999999999975443
Q ss_pred hcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcE
Q psy7365 201 WFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAST 280 (601)
Q Consensus 201 ~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 280 (601)
| +.+ |++
T Consensus 135 l--------------------------------------~~~-----------------------------------p~l 141 (251)
T PRK09544 135 L--------------------------------------LNR-----------------------------------PQL 141 (251)
T ss_pred H--------------------------------------hcC-----------------------------------CCE
Confidence 2 222 589
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 281 VILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 281 liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+||||||+|||+.++..+++.|+++. +..|.|||++||+++++...||++++|.+ +++..++
T Consensus 142 llLDEPt~~LD~~~~~~l~~~L~~~~----~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~ 203 (251)
T PRK09544 142 LVLDEPTQGVDVNGQVALYDLIDQLR----RELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGT 203 (251)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHH----HhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCC
Confidence 99999999999999999999999873 22389999999999999999999999964 6665554
No 303
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=5.5e-33 Score=296.75 Aligned_cols=196 Identities=23% Similarity=0.326 Sum_probs=167.3
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------ccc--ccccccccccCCc-ccccccccCCCCcccCCCCCHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSF--ARGYYLSLDMKSA-PQKSYIGYCPQFDALNDRLTPRE 391 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~--g~g~~igld~~~~-~~~~~ig~v~Q~~~l~~~lTv~E 391 (601)
+++++...-++.+++++... +|++++++ +.. |+.++.+.+.... +.++.+||+||++.+|+++||+|
T Consensus 22 ~~vsl~i~~Ge~~~llGpsG---sGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~e 98 (362)
T TIGR03258 22 DDLSLEIEAGELLALIGKSG---CGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVED 98 (362)
T ss_pred eeeEEEECCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHH
Confidence 78888888899999997522 45554432 333 4444444443221 23567999999999999999999
Q ss_pred HHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHH
Q psy7365 392 HLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWT 471 (601)
Q Consensus 392 ~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~ 471 (601)
|+.|....++.+..+.+++++++++.++|.+..++++.+|||||||||+|||||+.+|++|+|||||+|||+..+.++++
T Consensus 99 nl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~ 178 (362)
T TIGR03258 99 NVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMRE 178 (362)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHH
Confidence 99998776676666667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhC--CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 472 CIERAVSE--GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 472 lL~~l~~~--G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
.|+++.++ |+|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 179 ~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 179 EIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999876 79999999999999999999999999999999999998654
No 304
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.3e-33 Score=289.42 Aligned_cols=201 Identities=22% Similarity=0.327 Sum_probs=165.1
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.++||++.|.. ...++++|+||++.+ +||||+ ||||| .++|+|+++ ++|+|.++|.++.. ..
T Consensus 4 ~~~nls~~~~~--~~~~~l~~isl~I~~Ge~~~IvG~nGs--GKSTL------l~~L~gl~~-~~G~I~i~g~~i~~~~~ 72 (275)
T cd03289 4 TVKDLTAKYTE--GGNAVLENISFSISPGQRVGLLGRTGS--GKSTL------LSAFLRLLN-TEGDIQIDGVSWNSVPL 72 (275)
T ss_pred EEEEEEEEeCC--CCCcceeceEEEEcCCCEEEEECCCCC--CHHHH------HHHHhhhcC-CCcEEEECCEEhhhCCH
Confidence 48899999842 234599999999988 999999 56655 579999998 79999999998854 44
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCcccc-----------CChHHH
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANT-----------LSGGMQ 192 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-----------LSgG~~ 192 (601)
..+++.++|+||+|.+|+. |+++|+.++.. .+. +++.++++.+||.+..++++.. ||||||
T Consensus 73 ~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~~---~~~----~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~ 144 (275)
T cd03289 73 QKWRKAFGVIPQKVFIFSG-TFRKNLDPYGK---WSD----EEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHK 144 (275)
T ss_pred HHHhhhEEEECCCcccchh-hHHHHhhhccC---CCH----HHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHH
Confidence 5677899999999999974 99999964321 222 3567788999999888888877 999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++|||+ +.+
T Consensus 145 qrl~LaRal--------------------------------------l~~------------------------------ 156 (275)
T cd03289 145 QLMCLARSV--------------------------------------LSK------------------------------ 156 (275)
T ss_pred HHHHHHHHH--------------------------------------hcC------------------------------
Confidence 999865432 232
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
|+++||||||++||+.++..+.+.|+++ ..++|||++||+++++.. |||+++|.+|+++..+++..
T Consensus 157 -----p~illlDEpts~LD~~~~~~l~~~l~~~------~~~~tii~isH~~~~i~~-~dri~vl~~G~i~~~g~~~~ 222 (275)
T cd03289 157 -----AKILLLDEPSAHLDPITYQVIRKTLKQA------FADCTVILSEHRIEAMLE-CQRFLVIEENKVRQYDSIQK 222 (275)
T ss_pred -----CCEEEEECccccCCHHHHHHHHHHHHHh------cCCCEEEEEECCHHHHHh-CCEEEEecCCeEeecCCHHH
Confidence 5899999999999999999999999976 247999999999988865 99999999999998886643
No 305
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-33 Score=270.41 Aligned_cols=167 Identities=35% Similarity=0.522 Sum_probs=142.2
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc---
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD--- 122 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~--- 122 (601)
++++++.|++ .++++++||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~l~~~~~~----~~~l~~i~~~i~~G~~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 70 (178)
T cd03229 3 LKNVSKRYGQ----KTVLNDVSLNIEAGEIVALLGPSGS--GKSTL------LRCIAGLEEPDSGSILIDGEDLTDLEDE 70 (178)
T ss_pred EEEEEEEECC----eEEEeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEECCEEccccchh
Confidence 7889999864 4599999999988 999999 57665 6799999999999999999987542
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
....++.++|+||++.+|+.+|+.||+.+. ||||||||+++||+
T Consensus 71 ~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~----------------------------------lS~G~~qr~~la~a-- 114 (178)
T cd03229 71 LPPLRRRIGMVFQDFALFPHLTVLENIALG----------------------------------LSGGQQQRVALARA-- 114 (178)
T ss_pred HHHHhhcEEEEecCCccCCCCCHHHheeec----------------------------------CCHHHHHHHHHHHH--
Confidence 345667899999999999999999998653 99999999975443
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
++.+ |+++|
T Consensus 115 ------------------------------------l~~~-----------------------------------p~lli 123 (178)
T cd03229 115 ------------------------------------LAMD-----------------------------------PDVLL 123 (178)
T ss_pred ------------------------------------HHCC-----------------------------------CCEEE
Confidence 2233 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
|||||+|||+.++..++++|+++. +..|.|+|++||+++++...||++++|.+|+
T Consensus 124 lDEP~~~LD~~~~~~l~~~l~~~~----~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 124 LDEPTSALDPITRREVRALLKSLQ----AQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 999999999999999999999873 2237899999999999999999999999874
No 306
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6.4e-33 Score=295.54 Aligned_cols=202 Identities=23% Similarity=0.342 Sum_probs=170.5
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~ 384 (601)
.++.++ +++++...-++.+++++... +|++++++ +..|+.++.+.+... .+.++.+||+||++.+|
T Consensus 15 ~~~~~l---~~vs~~i~~Ge~~~l~GpsG---sGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lf 88 (353)
T TIGR03265 15 GAFTAL---KDISLSVKKGEFVCLLGPSG---CGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVFQSYALF 88 (353)
T ss_pred CCeEEE---EeeEEEEcCCCEEEEECCCC---CCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCcccC
Confidence 344544 78888888899999998532 55555443 333444444433322 22467899999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+++||+||+.|....++.+..+.+++++++++.++|.++.++++.+|||||||||+|||||+.+|++++|||||+|||+.
T Consensus 89 p~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~ 168 (353)
T TIGR03265 89 PNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDAR 168 (353)
T ss_pred CCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHH
Confidence 99999999999877666666667788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
.+..+++.|+++.++ |.|+|++|||++|+..+||||++|++|+++..|+++++.++
T Consensus 169 ~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 169 VREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999998765 99999999999999999999999999999999999998653
No 307
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-33 Score=294.76 Aligned_cols=195 Identities=21% Similarity=0.312 Sum_probs=167.5
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-ccccccccCCCCcccCCCCCHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-PQKSYIGYCPQFDALNDRLTPREHL 393 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-~~~~~ig~v~Q~~~l~~~lTv~E~L 393 (601)
+++++...-++.+++++... +|++++++ +..|+.++.+.++... ..++++||+||++.+|+++||+||+
T Consensus 23 ~~isl~i~~Ge~~~llGpsG---sGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi 99 (351)
T PRK11432 23 DNLNLTIKQGTMVTLLGPSG---CGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENV 99 (351)
T ss_pred eeeEEEEcCCCEEEEECCCC---CcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHH
Confidence 78888888999999998532 55555443 2334444444443322 2357899999999999999999999
Q ss_pred HHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHH
Q psy7365 394 EFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCI 473 (601)
Q Consensus 394 ~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL 473 (601)
.|..+.++.+..+..++++++++.++|.++.++++.+|||||||||+|||||+.+|++|||||||+|||+..+.++++.|
T Consensus 100 ~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l 179 (351)
T PRK11432 100 GYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKI 179 (351)
T ss_pred HHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHH
Confidence 99877777666667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 474 ERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 474 ~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++.++ |+|+|++|||++|+..+||||++|++|+++..|+++++..
T Consensus 180 ~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~ 226 (351)
T PRK11432 180 RELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYR 226 (351)
T ss_pred HHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999765 8999999999999999999999999999999999999854
No 308
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.7e-33 Score=293.10 Aligned_cols=194 Identities=22% Similarity=0.312 Sum_probs=166.8
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++...-++.+++++... +|+++++ +++.|+.++.+.++... ..+++|||+||++.+++.+|
T Consensus 22 ~~vsl~i~~Gei~gIiG~sG---aGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~t 98 (343)
T TIGR02314 22 NNVSLHVPAGQIYGVIGASG---AGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRT 98 (343)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCc
Confidence 89999999999999997522 4555543 23345554555444321 13568999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
|+||+.+.....+.+..+.++++.++++.+||.+..++++.+|||||||||+|||||+.+|++|||||||+||||.++..
T Consensus 99 v~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~ 178 (343)
T TIGR02314 99 VFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQS 178 (343)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHH
Confidence 99999987766666666677789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 469 LWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 469 i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
++++|++++++ |.|||++||+++++.++||||++|++|+++..|+++++.
T Consensus 179 i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 179 ILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999875 999999999999999999999999999999999998874
No 309
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-33 Score=282.77 Aligned_cols=199 Identities=22% Similarity=0.327 Sum_probs=167.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------ccccccccccc---ccCC-cccccccccCCCCcccCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSL---DMKS-APQKSYIGYCPQFDALNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igl---d~~~-~~~~~~ig~v~Q~~~l~~~lTv~ 390 (601)
+|++...+-+..+++++... +|+++.++ ++.|+....+. |... ....++|||++|+..+|++|||.
T Consensus 19 ~di~l~i~~Ge~vaLlGpSG---aGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa 95 (345)
T COG1118 19 DDISLDIKSGELVALLGPSG---AGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVA 95 (345)
T ss_pred ccceeeecCCcEEEEECCCC---CcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeEEEechhhcccchHH
Confidence 47777777888888887532 55555443 33344333332 3333 23457899999999999999999
Q ss_pred HHHHHhHHhcCC--ChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 391 EHLEFYSRVRNL--PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 391 E~L~~~~~~~g~--~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
+|+.|..+.+.. +....+.++.++|+.+.|++..+++|.+|||||||||++||||+.+|++|+||||+++||..-|.+
T Consensus 96 ~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~ 175 (345)
T COG1118 96 DNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKE 175 (345)
T ss_pred hhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHH
Confidence 999998866532 235677889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCC
Q psy7365 469 LWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQ 523 (601)
Q Consensus 469 i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~ 523 (601)
+...|+++.++ |.|++++|||.+|+.++||||++|++|+|...|+|+++......
T Consensus 176 lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P~s 231 (345)
T COG1118 176 LRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHPAS 231 (345)
T ss_pred HHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCCCc
Confidence 99999999876 99999999999999999999999999999999999999765543
No 310
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-33 Score=278.67 Aligned_cols=201 Identities=21% Similarity=0.327 Sum_probs=162.9
Q ss_pred cCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCccc-
Q psy7365 312 LSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDAL- 383 (601)
Q Consensus 312 ~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l- 383 (601)
+.+..++ |++++...-++.+.+++... .|+++++| +..|+..+.+.+......+.+||||||...+
T Consensus 14 y~~~~vl---~~i~l~v~~G~~~~iiGPNG---aGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d 87 (254)
T COG1121 14 YGNRPVL---EDISLSVEKGEITALIGPNG---AGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVPQKSSVD 87 (254)
T ss_pred ECCEeee---eccEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcCcccccC
Confidence 3333555 99999999999999998422 56666544 3444555555444434445789999996543
Q ss_pred -CCCCCHHHHHHHhHH----hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCC
Q psy7365 384 -NDRLTPREHLEFYSR----VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPT 458 (601)
Q Consensus 384 -~~~lTv~E~L~~~~~----~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPT 458 (601)
-..+||+|.+.+... +.+...+..++.++++|+++|+.+++++++++|||||+|||.|||||+++|++|+|||||
T Consensus 88 ~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARAL~~~p~lllLDEP~ 167 (254)
T COG1121 88 RSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVLLARALAQNPDLLLLDEPF 167 (254)
T ss_pred CCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHHHHHHhccCCCEEEecCCc
Confidence 344799999987532 122333445788999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 459 SGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 459 sGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+|+|+.++..++++|++++++|+||+++|||++.+.++||+|+.|+ +++++.|+++++.+
T Consensus 168 ~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~ 227 (254)
T COG1121 168 TGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLT 227 (254)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccC
Confidence 9999999999999999999889999999999999999999999995 68899999987643
No 311
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=5e-33 Score=267.58 Aligned_cols=164 Identities=27% Similarity=0.464 Sum_probs=138.1
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
++++++.|+.. ..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. ...
T Consensus 3 ~~~l~~~~~~~--~~~~l~~~~~~i~~Ge~~~i~G~nGs--GKStL------l~~l~G~~~~~~G~i~~~g~~~~~~~~~ 72 (173)
T cd03246 3 VENVSFRYPGA--EPPVLRNVSFSIEPGESLAIIGPSGS--GKSTL------ARLILGLLRPTSGRVRLDGADISQWDPN 72 (173)
T ss_pred EEEEEEEcCCC--CCcceeeeEEEECCCCEEEEECCCCC--CHHHH------HHHHHhccCCCCCeEEECCEEcccCCHH
Confidence 68899987532 24599999999987 999999 56665 579999999999999999998754 334
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.++|+||++.+|+ .|+.||+ ||||||||+++||+|
T Consensus 73 ~~~~~i~~~~q~~~~~~-~tv~~~l-------------------------------------LS~G~~qrv~la~al--- 111 (173)
T cd03246 73 ELGDHVGYLPQDDELFS-GSIAENI-------------------------------------LSGGQRQRLGLARAL--- 111 (173)
T ss_pred HHHhheEEECCCCcccc-CcHHHHC-------------------------------------cCHHHHHHHHHHHHH---
Confidence 55678999999998887 4999987 999999999854432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+. +|+++|||
T Consensus 112 -----------------------------------~~-----------------------------------~p~~lllD 121 (173)
T cd03246 112 -----------------------------------YG-----------------------------------NPRILVLD 121 (173)
T ss_pred -----------------------------------hc-----------------------------------CCCEEEEE
Confidence 22 25899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
|||+|||+.++..+++.|+++. .+|+|+|++||+++++ ..||++++|.+|++
T Consensus 122 EPt~~LD~~~~~~l~~~l~~~~-----~~~~tii~~sh~~~~~-~~~d~v~~l~~G~i 173 (173)
T cd03246 122 EPNSHLDVEGERALNQAIAALK-----AAGATRIVIAHRPETL-ASADRILVLEDGRV 173 (173)
T ss_pred CCccccCHHHHHHHHHHHHHHH-----hCCCEEEEEeCCHHHH-HhCCEEEEEECCCC
Confidence 9999999999999999999873 3589999999999988 57999999999874
No 312
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.5e-33 Score=282.02 Aligned_cols=201 Identities=24% Similarity=0.335 Sum_probs=169.6
Q ss_pred ccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc---ccccccccCCCC
Q psy7365 311 SLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA---PQKSYIGYCPQF 380 (601)
Q Consensus 311 ~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~---~~~~~ig~v~Q~ 380 (601)
.+.+++|+ +++++...-++.+++++... +|++++++ +..|..+..|.++... ...++++|+||.
T Consensus 11 ~y~~~~il---~~ls~~i~~G~i~~iiGpNG---~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~ 84 (258)
T COG1120 11 GYGGKPIL---DDLSFSIPKGEITGILGPNG---SGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYVPQS 84 (258)
T ss_pred EECCeeEE---ecceEEecCCcEEEEECCCC---CCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEeccC
Confidence 45566776 99999999999999998532 67776654 3345555556555432 346889999999
Q ss_pred cccCCCCCHHHHHHHhHH----hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEEC
Q psy7365 381 DALNDRLTPREHLEFYSR----VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDE 456 (601)
Q Consensus 381 ~~l~~~lTv~E~L~~~~~----~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDE 456 (601)
+...+.+||+|.+.+... +++.+.++..+.++++|+.+++.++++|.+.+||||||||+.||+||+++|++|+|||
T Consensus 85 ~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~~iLLLDE 164 (258)
T COG1120 85 PSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQETPILLLDE 164 (258)
T ss_pred CCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCCCEEEeCC
Confidence 988889999999987532 2233344555679999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 457 PTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 457 PTsGLD~~~~~~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
||+.||+.++.+++++++++++ +|+|||+++||++.+.++||++++|++|++++.|+|+++
T Consensus 165 PTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ev 226 (258)
T COG1120 165 PTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEV 226 (258)
T ss_pred CccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchh
Confidence 9999999999999999999984 599999999999999999999999999999999998765
No 313
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.1e-32 Score=314.88 Aligned_cols=205 Identities=24% Similarity=0.358 Sum_probs=169.8
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC--eeEEEEccccCCCch
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS--SGTAKIYDHDIRTDM 123 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~--~G~v~~~g~~~~~~~ 123 (601)
.+++++.|++ ..+++|+|+++.+ +||||| ||||| .++|+|.++|+ +|+|.++|+++..
T Consensus 71 ~~~l~~~~~~----~~iL~~vs~~i~~Ge~~aI~GpnGa--GKSTL------L~iLaG~~~~~~~sG~I~inG~~~~~-- 136 (659)
T PLN03211 71 ISDETRQIQE----RTILNGVTGMASPGEILAVLGPSGS--GKSTL------LNALAGRIQGNNFTGTILANNRKPTK-- 136 (659)
T ss_pred cccccccCCC----CeeeeCCEEEEECCEEEEEECCCCC--CHHHH------HHHHhCCCCCCceeEEEEECCEECch--
Confidence 4567777653 4599999999998 999999 57665 67999999985 9999999998742
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc---CCChHHHHHHHHHHHHHcCCCccc-----CCccccCChHHHhhh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK---QVPKDLAQLEISNMIGDLGIPHKR-----TSLANTLSGGMQRKL 195 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~-----~~~~~~LSgG~~qr~ 195 (601)
..++++|||+|++.+++.+||+||+.|.+... ..++++.+++++++++.+||.+.. ++.+++||||||||+
T Consensus 137 -~~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv 215 (659)
T PLN03211 137 -QILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRV 215 (659)
T ss_pred -hhccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHH
Confidence 23567999999999999999999999976543 234455567789999999998765 456778999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++|++| +++
T Consensus 216 ~ia~aL--------------------------------------~~~--------------------------------- 224 (659)
T PLN03211 216 SIAHEM--------------------------------------LIN--------------------------------- 224 (659)
T ss_pred HHHHHH--------------------------------------HhC---------------------------------
Confidence 865433 233
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchh-HHHhcCCEEEEecCCccccccCcc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMD-EADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~-~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|++++|||||+|||+.++..+.+.|+++. .+|+|||+++|+++ ++.+++|++++|.+|+++..|+..
T Consensus 225 --P~iLlLDEPtsgLD~~~~~~l~~~L~~l~-----~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~ 292 (659)
T PLN03211 225 --PSLLILDEPTSGLDATAAYRLVLTLGSLA-----QKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGS 292 (659)
T ss_pred --CCEEEEeCCCCCcCHHHHHHHHHHHHHHH-----hCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHH
Confidence 58999999999999999999999999883 35899999999998 588999999999999998887654
No 314
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=1e-32 Score=276.09 Aligned_cols=179 Identities=23% Similarity=0.384 Sum_probs=146.8
Q ss_pred ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHHhcccEEEEccCCCCC--CCCCHHHHHHHhHhh-
Q psy7365 79 LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCPQYNALF--DKLTVEEHMWFYSQL- 155 (601)
Q Consensus 79 ~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~Q~~~~~--~~~tv~e~l~~~~~~- 155 (601)
+||||| ||||| .++|+|+++|++|+|.++|+++. ..++.++|+||++.++ +.+|+.||+.++...
T Consensus 12 ~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~~~----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~ 79 (223)
T TIGR03771 12 LGPNGA--GKTTL------LRAILGLIPPAKGTVKVAGASPG----KGWRHIGYVPQRHEFAWDFPISVAHTVMSGRTGH 79 (223)
T ss_pred ECCCCC--CHHHH------HHHHhCCCCCCCceEEECCccch----HhhCcEEEecccccccCCCCccHHHHHHhccccc
Confidence 899999 56665 57999999999999999998763 2356799999998764 347999999875321
Q ss_pred ---cCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCc
Q psy7365 156 ---KQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSR 232 (601)
Q Consensus 156 ---~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~ 232 (601)
.+.+....+.++.++++.+|+.+..++++.+||||||||+++||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral------------------------------- 128 (223)
T TIGR03771 80 IGWLRRPCVADFAAVRDALRRVGLTELADRPVGELSGGQRQRVLVARAL------------------------------- 128 (223)
T ss_pred cccccCCcHHHHHHHHHHHHHhCCchhhcCChhhCCHHHHHHHHHHHHH-------------------------------
Confidence 1112233445688999999999989999999999999999854432
Q ss_pred chhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhcccc
Q psy7365 233 DDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSL 312 (601)
Q Consensus 233 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~ 312 (601)
+.+ |+++||||||+|||+.++..+.+.|+++. .
T Consensus 129 -------~~~-----------------------------------p~llilDEP~~~LD~~~~~~l~~~l~~~~-----~ 161 (223)
T TIGR03771 129 -------ATR-----------------------------------PSVLLLDEPFTGLDMPTQELLTELFIELA-----G 161 (223)
T ss_pred -------hcC-----------------------------------CCEEEEeCCcccCCHHHHHHHHHHHHHHH-----H
Confidence 233 58999999999999999999999999873 3
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+|+|+|++||+++++..+||+++++ +|+++..++.
T Consensus 162 ~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~ 196 (223)
T TIGR03771 162 AGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTP 196 (223)
T ss_pred cCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCH
Confidence 5899999999999999999999999 7998876654
No 315
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=5.1e-33 Score=268.60 Aligned_cols=170 Identities=27% Similarity=0.412 Sum_probs=141.9
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|+.. ..++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.....
T Consensus 2 ~~~~~~~~~~~~--~~~~l~~i~~~i~~Ge~~~i~G~nGs--GKStL------l~~l~G~~~~~~G~i~~~g~~~~~~~~ 71 (178)
T cd03247 2 SINNVSFSYPEQ--EQQVLKNLSLELKQGEKIALLGRSGS--GKSTL------LQLLTGDLKPQQGEITLDGVPVSDLEK 71 (178)
T ss_pred EEEEEEEEeCCC--CccceEEEEEEEcCCCEEEEECCCCC--CHHHH------HHHHhccCCCCCCEEEECCEEHHHHHH
Confidence 368899987542 23589999999988 999999 56665 579999999999999999987643233
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.++|+||++.+|+ .|++||+ +.+||||||||+++||++
T Consensus 72 ~~~~~i~~~~q~~~~~~-~tv~~~i----------------------------------~~~LS~G~~qrv~laral--- 113 (178)
T cd03247 72 ALSSLISVLNQRPYLFD-TTLRNNL----------------------------------GRRFSGGERQRLALARIL--- 113 (178)
T ss_pred HHHhhEEEEccCCeeec-ccHHHhh----------------------------------cccCCHHHHHHHHHHHHH---
Confidence 45678999999998875 6999987 789999999999865433
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 114 -----------------------------------~~~-----------------------------------p~~lllD 123 (178)
T cd03247 114 -----------------------------------LQD-----------------------------------APIVLLD 123 (178)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEE
Confidence 233 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|||+|||+.+++.+++.|.++ . ++.|+|++||+++++. .||++++|.+|+++..
T Consensus 124 EP~~~LD~~~~~~l~~~l~~~-----~-~~~tii~~sh~~~~~~-~~d~~~~l~~g~i~~~ 177 (178)
T cd03247 124 EPTVGLDPITERQLLSLIFEV-----L-KDKTLIWITHHLTGIE-HMDKILFLENGKIIMQ 177 (178)
T ss_pred CCcccCCHHHHHHHHHHHHHH-----c-CCCEEEEEecCHHHHH-hCCEEEEEECCEEEec
Confidence 999999999999999999987 2 4789999999999986 6999999999998653
No 316
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=313.48 Aligned_cols=212 Identities=22% Similarity=0.281 Sum_probs=179.3
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc-
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD- 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~- 122 (601)
..++|+++.|+......++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 5 l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~Gl~~~~~G~i~~~g~~i~~~~ 76 (648)
T PRK10535 5 LELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGS--GKSTL------MNILGCLDKPTSGTYRVAGQDVATLD 76 (648)
T ss_pred EEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCeEEEECCEEcCcCC
Confidence 45899999985333345699999999988 999999 56655 5799999999999999999988642
Q ss_pred hHH----hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhch
Q psy7365 123 MTT----IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNV 198 (601)
Q Consensus 123 ~~~----~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~ 198 (601)
... .++.+||+||++.+|+.+|+.||+.+.....+.+..+.++++.++++.+||.+..++.+.+|||||+||+++|
T Consensus 77 ~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LA 156 (648)
T PRK10535 77 ADALAQLRREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIA 156 (648)
T ss_pred HHHHHHHHhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHH
Confidence 222 2568999999999999999999999876655666666677889999999999999999999999999999865
Q ss_pred hhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCC
Q psy7365 199 KVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPA 278 (601)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 278 (601)
|+|+ ++ |
T Consensus 157 raL~--------------------------------------~~-----------------------------------P 163 (648)
T PRK10535 157 RALM--------------------------------------NG-----------------------------------G 163 (648)
T ss_pred HHHh--------------------------------------cC-----------------------------------C
Confidence 4332 33 5
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 279 STVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 279 ~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
+++||||||+|||+.+++.+.++|+++. .+|+|+|++||+.++.. .||++++|.+|+++..++.
T Consensus 164 ~lLllDEP~~gLD~~s~~~l~~ll~~l~-----~~g~tilivsH~~~~~~-~~d~i~~l~~G~i~~~g~~ 227 (648)
T PRK10535 164 QVILADEPTGALDSHSGEEVMAILHQLR-----DRGHTVIIVTHDPQVAA-QAERVIEIRDGEIVRNPPA 227 (648)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHH-----hcCCEEEEECCCHHHHH-hCCEEEEEECCEEEeecCc
Confidence 8999999999999999999999999873 35899999999999875 6999999999999887754
No 317
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-32 Score=299.98 Aligned_cols=200 Identities=18% Similarity=0.194 Sum_probs=164.4
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
..+++|++.|++. ...++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.+.
T Consensus 22 L~lknL~~~~~~~-~~~~IL~nVSfsI~~GEivgIiGpNGS--GKSTL------LkiLaGLl~P~sGeI~I~G~~~---- 88 (549)
T PRK13545 22 DKLKDLFFRSKDG-EYHYALNNISFEVPEGEIVGIIGLNGS--GKSTL------SNLIAGVTMPNKGTVDIKGSAA---- 88 (549)
T ss_pred eEEEEEEEecCCC-ccceEEeeeEEEEeCCCEEEEEcCCCC--CHHHH------HHHHhCCCCCCceEEEECCEee----
Confidence 3477887776432 235699999999988 999999 56665 6799999999999999999642
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcc
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFN 203 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~ 203 (601)
++++.+.+++.+|+.||+.+.....+.+..+..+++.++++.+|+.+..++++.+||||||||+++||||
T Consensus 89 --------~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL-- 158 (549)
T PRK13545 89 --------LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISV-- 158 (549)
T ss_pred --------eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHH--
Confidence 2233455677899999999866555666666667788999999999999999999999999999854432
Q ss_pred hhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEE
Q psy7365 204 NKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVIL 283 (601)
Q Consensus 204 ~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liL 283 (601)
+.+ |++|||
T Consensus 159 ------------------------------------~~~-----------------------------------P~LLLL 167 (549)
T PRK13545 159 ------------------------------------HIN-----------------------------------PDILVI 167 (549)
T ss_pred ------------------------------------HhC-----------------------------------CCEEEE
Confidence 222 589999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 284 DEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 284 DEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
||||+|||+.++..+++.|.++. ..|+|||++||+++++..+||++++|.+|++...+++
T Consensus 168 DEPTsgLD~~sr~~LlelL~el~-----~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~ 227 (549)
T PRK13545 168 DEALSVGDQTFTKKCLDKMNEFK-----EQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDI 227 (549)
T ss_pred ECCcccCCHHHHHHHHHHHHHHH-----hCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999872 3589999999999999999999999999999877654
No 318
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=5e-33 Score=269.26 Aligned_cols=170 Identities=29% Similarity=0.431 Sum_probs=143.8
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
++++++.|+. .++++++||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. ...
T Consensus 2 ~~~l~~~~~~----~~~l~~~~~~i~~G~~~~l~G~nGs--GKStL------l~~i~G~~~~~~G~v~~~g~~~~~~~~~ 69 (180)
T cd03214 2 VENLSVGYGG----RTVLDDLSLSIEAGEIVGILGPNGA--GKSTL------LKTLAGLLKPSSGEILLDGKDLASLSPK 69 (180)
T ss_pred eeEEEEEECC----eeeEeeeEEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEECCcCCHH
Confidence 6789998854 4599999999988 999999 56655 679999999999999999998854 333
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.+||+|| +++.+|+.+..++.+.+||||||||+++||+|+
T Consensus 70 ~~~~~i~~~~q----------------------------------~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~-- 113 (180)
T cd03214 70 ELARKIAYVPQ----------------------------------ALELLGLAHLADRPFNELSGGERQRVLLARALA-- 113 (180)
T ss_pred HHHHHHhHHHH----------------------------------HHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHh--
Confidence 45667999998 678889888888999999999999998654322
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
. +|+++|||
T Consensus 114 ------------------------------------~-----------------------------------~p~llllD 122 (180)
T cd03214 114 ------------------------------------Q-----------------------------------EPPILLLD 122 (180)
T ss_pred ------------------------------------c-----------------------------------CCCEEEEe
Confidence 2 25899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQC 344 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~ 344 (601)
|||+|||+.++..+.+.|.++. +..|.|+|++||+++++.++||++++|.+|++..
T Consensus 123 EP~~~LD~~~~~~~~~~l~~~~----~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 178 (180)
T cd03214 123 EPTSHLDIAHQIELLELLRRLA----RERGKTVVMVLHDLNLAARYADRVILLKDGRIVA 178 (180)
T ss_pred CCccCCCHHHHHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999873 1227899999999999999999999999998754
No 319
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-32 Score=298.86 Aligned_cols=202 Identities=27% Similarity=0.378 Sum_probs=163.3
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
+++|++.|. .++ ++++|+||++.+ +||||| ||||| .++|+|+++|++|+|++||.+..+ ...
T Consensus 323 ~~~l~~~y~--~g~-~~l~~l~~t~~~g~~talvG~SGa--GKSTL------l~lL~G~~~~~~G~I~vng~~l~~l~~~ 391 (559)
T COG4988 323 LENLSFRYP--DGK-PALSDLNLTIKAGQLTALVGASGA--GKSTL------LNLLLGFLAPTQGEIRVNGIDLRDLSPE 391 (559)
T ss_pred ecceEEecC--CCC-cccCCceeEecCCcEEEEECCCCC--CHHHH------HHHHhCcCCCCCceEEECCccccccCHH
Confidence 568888854 444 799999999988 999999 56655 579999999999999999999875 456
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCccc------C----CccccCChHHHhh
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKR------T----SLANTLSGGMQRK 194 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~------~----~~~~~LSgG~~qr 194 (601)
..++.+++|+|+|.+|+ -|++||+.|+... .+ ++.+.++++..|+.+.. | .....|||||+||
T Consensus 392 ~~~k~i~~v~Q~p~lf~-gTireNi~l~~~~--~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QR 464 (559)
T COG4988 392 AWRKQISWVSQNPYLFA-GTIRENILLARPD--AS----DEEIIAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQR 464 (559)
T ss_pred HHHhHeeeeCCCCcccc-ccHHHHhhccCCc--CC----HHHHHHHHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHH
Confidence 78899999999999985 5999999886432 22 34466677777765443 2 3334599999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
|++|||++++
T Consensus 465 laLARAll~~---------------------------------------------------------------------- 474 (559)
T COG4988 465 LALARALLSP---------------------------------------------------------------------- 474 (559)
T ss_pred HHHHHHhcCC----------------------------------------------------------------------
Confidence 9866544333
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
++++++||||++||.++...+.+.|.++. +++|++++||+++.+. -+|+|++|++|++++.|+...+
T Consensus 475 ---~~l~llDEpTA~LD~etE~~i~~~l~~l~------~~ktvl~itHrl~~~~-~~D~I~vld~G~l~~~g~~~~L 541 (559)
T COG4988 475 ---ASLLLLDEPTAHLDAETEQIILQALQELA------KQKTVLVITHRLEDAA-DADRIVVLDNGRLVEQGTHEEL 541 (559)
T ss_pred ---CCEEEecCCccCCCHhHHHHHHHHHHHHH------hCCeEEEEEcChHHHh-cCCEEEEecCCceeccCCHHHH
Confidence 48999999999999999999999999883 5699999999997776 7999999999999998875443
No 320
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-32 Score=312.39 Aligned_cols=204 Identities=22% Similarity=0.288 Sum_probs=160.3
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||++.|. + +.++++|+||++++ +||||| ||||| .++|+|++ |++|+|+++|.++.. +
T Consensus 350 i~~~~vsf~~~--~-~~~vL~~i~l~i~~G~~vaIvG~SGs--GKSTL------~~lL~g~~-p~~G~I~i~g~~i~~~~ 417 (588)
T PRK11174 350 IEAEDLEILSP--D-GKTLAGPLNFTLPAGQRIALVGPSGA--GKTSL------LNALLGFL-PYQGSLKINGIELRELD 417 (588)
T ss_pred EEEEeeEEecc--C-CCeeeeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCC-CCCcEEEECCEecccCC
Confidence 55899987542 1 35699999999988 999999 56655 57999999 899999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHH-----HHHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLE-----ISNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
...+|+.||||||+|.+|. -|++||+.++.. ..+.++..+. +.+.++.+ |+..........||||||||+
T Consensus 418 ~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~~--~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRi 494 (588)
T PRK11174 418 PESWRKHLSWVGQNPQLPH-GTLRDNVLLGNP--DASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRL 494 (588)
T ss_pred HHHHHhheEEecCCCcCCC-cCHHHHhhcCCC--CCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHH
Confidence 5678899999999999985 599999988632 2333332221 22334444 444444555678999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
+||||++.|
T Consensus 495 alARAll~~----------------------------------------------------------------------- 503 (588)
T PRK11174 495 ALARALLQP----------------------------------------------------------------------- 503 (588)
T ss_pred HHHHHHhcC-----------------------------------------------------------------------
Confidence 876654433
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++||||||||+||+.+.+.+.+.|.++ .+++|+|++||+++.+. .||+|+++++|+++..|+.
T Consensus 504 --~~IliLDE~TSaLD~~te~~i~~~l~~~------~~~~TvIiItHrl~~i~-~aD~Iivl~~G~i~e~G~~ 567 (588)
T PRK11174 504 --CQLLLLDEPTASLDAHSEQLVMQALNAA------SRRQTTLMVTHQLEDLA-QWDQIWVMQDGQIVQQGDY 567 (588)
T ss_pred --CCEEEEeCCccCCCHHHHHHHHHHHHHH------hCCCEEEEEecChHHHH-hCCEEEEEeCCeEeecCCH
Confidence 4899999999999999999999999886 25899999999997765 6999999999999988764
No 321
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.5e-32 Score=269.86 Aligned_cols=187 Identities=21% Similarity=0.287 Sum_probs=157.1
Q ss_pred EEEecchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCcc-------cccccccCCCCccc
Q psy7365 318 ILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSAP-------QKSYIGYCPQFDAL 383 (601)
Q Consensus 318 I~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~~-------~~~~ig~v~Q~~~l 383 (601)
+-+-+++++...-++.+++++.-. +|+++++ +++.+..++.+.++.... .+++|||+||+..|
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSG---SGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSG---SGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCC---CCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 334499999999999999998632 5655543 344455455554543221 35679999999999
Q ss_pred CCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccc-cccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCC
Q psy7365 384 NDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSD-REVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMD 462 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~-~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD 462 (601)
.+.+||.||+.+...+.+.+.....++++++++.+||.+..+ ++|.+|||||||||+|||||+++|++++.||||..||
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD 174 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLD 174 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCC
Confidence 999999999999887777765556678899999999997666 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEE
Q psy7365 463 PGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQF 508 (601)
Q Consensus 463 ~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~i 508 (601)
..+.+++++++++++++ |+|||++|||.+.+. +|||++.|++|++
T Consensus 175 ~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~ 220 (226)
T COG1136 175 SKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKI 220 (226)
T ss_pred hHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCee
Confidence 99999999999999866 999999999988877 7999999999984
No 322
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-32 Score=288.65 Aligned_cols=196 Identities=22% Similarity=0.341 Sum_probs=166.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.++... ..++++||+||++.+++.+|
T Consensus 22 ~~vsl~i~~Gei~~iiG~nG---sGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~t 98 (343)
T PRK11153 22 NNVSLHIPAGEIFGVIGASG---AGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRT 98 (343)
T ss_pred EeeEEEEcCCCEEEEECCCC---CcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCc
Confidence 89999999999999998522 45555433 3334444444443221 12567999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
+.||+.+....++.+..+..+++.++++.++|.+..++++.+||||||||++||+||+++|++|||||||+|||+.++..
T Consensus 99 v~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~ 178 (343)
T PRK11153 99 VFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRS 178 (343)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHH
Confidence 99999987766666655566778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 469 LWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 469 i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
++++|++++++ |+|||++||+++++..+|||+++|++|+++..|+++++...
T Consensus 179 l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 179 ILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999765 89999999999999999999999999999999999998654
No 323
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=99.98 E-value=2.3e-32 Score=315.18 Aligned_cols=200 Identities=25% Similarity=0.309 Sum_probs=163.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||++.|+. .+.++++|+||++++ +||||| ||||| .++|+|+++|++|+|.+||.++.. +
T Consensus 452 I~~~nvsf~Y~~--~~~~vL~~isl~i~~Ge~vaIvG~sGs--GKSTL------lklL~gl~~p~~G~I~idg~~i~~~~ 521 (686)
T TIGR03797 452 IEVDRVTFRYRP--DGPLILDDVSLQIEPGEFVAIVGPSGS--GKSTL------LRLLLGFETPESGSVFYDGQDLAGLD 521 (686)
T ss_pred EEEEEEEEEcCC--CCccceeeeEEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCEEEECCEEcCcCC
Confidence 459999999753 346799999999988 999999 56665 579999999999999999999975 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCccc-----------CCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKR-----------TSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgG~ 191 (601)
...+|+.+|||||+|.+|. -|++||+.++.. .+. +++.++++..|+.+.. ......|||||
T Consensus 522 ~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~~---~~~----e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQ 593 (686)
T TIGR03797 522 VQAVRRQLGVVLQNGRLMS-GSIFENIAGGAP---LTL----DEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQ 593 (686)
T ss_pred HHHHHhccEEEccCCccCc-ccHHHHHhcCCC---CCH----HHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHH
Confidence 6678999999999999985 599999987632 232 3455666666655432 23346799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||||+++
T Consensus 594 rQRialARAll~~------------------------------------------------------------------- 606 (686)
T TIGR03797 594 RQRLLIARALVRK------------------------------------------------------------------- 606 (686)
T ss_pred HHHHHHHHHHhcC-------------------------------------------------------------------
Confidence 9999876654433
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++|||||||+||+.+.+.+.+.|+++ ++|+|++||+++.+. .||+|++|++|+++..|+..
T Consensus 607 ------p~iLiLDEpTS~LD~~te~~i~~~L~~~--------~~T~IiItHr~~~i~-~~D~Iivl~~G~iv~~G~~~ 669 (686)
T TIGR03797 607 ------PRILLFDEATSALDNRTQAIVSESLERL--------KVTRIVIAHRLSTIR-NADRIYVLDAGRVVQQGTYD 669 (686)
T ss_pred ------CCEEEEeCCccCCCHHHHHHHHHHHHHh--------CCeEEEEecChHHHH-cCCEEEEEECCEEEEECCHH
Confidence 4899999999999999999999998764 579999999998875 59999999999999888643
No 324
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.98 E-value=1.5e-32 Score=280.56 Aligned_cols=205 Identities=19% Similarity=0.255 Sum_probs=161.2
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..++++++.|++. ..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +
T Consensus 20 i~~~~l~~~~~~~--~~~il~~isl~i~~Ge~~~i~G~nGs--GKSTL------l~~l~Gl~~~~~G~i~i~g~~i~~~~ 89 (257)
T cd03288 20 IKIHDLCVRYENN--LKPVLKHVKAYIKPGQKVGICGRTGS--GKSSL------SLAFFRMVDIFDGKIVIDGIDISKLP 89 (257)
T ss_pred EEEEEEEEEeCCC--CCcceeEEEEEEcCCCEEEEECCCCC--CHHHH------HHHHHcccCCCCCeEEECCEEhhhCC
Confidence 4589999998642 24599999999988 999999 56665 579999999999999999998754 3
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHH-----HHHHHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQ-----LEISNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
....++.+||+||++.+|+ .|++||+.+... ....... ..+.+.++.+ |++...++.+.+|||||+||+
T Consensus 90 ~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl 165 (257)
T cd03288 90 LHTLRSRLSIILQDPILFS-GSIRFNLDPECK---CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLF 165 (257)
T ss_pred HHHHhhhEEEECCCCcccc-cHHHHhcCcCCC---CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHH
Confidence 4456788999999998876 599999854311 1111111 1234555555 677777788899999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++|||+ +.+
T Consensus 166 ~laral--------------------------------------~~~--------------------------------- 174 (257)
T cd03288 166 CLARAF--------------------------------------VRK--------------------------------- 174 (257)
T ss_pred HHHHHH--------------------------------------hcC---------------------------------
Confidence 754432 232
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||+|||+.++..+++++.++ . ++.|+|++||+++++.. |||+++|.+|+++..++.
T Consensus 175 --p~llllDEPt~gLD~~~~~~l~~~l~~~-----~-~~~tiii~sh~~~~~~~-~dri~~l~~G~i~~~g~~ 238 (257)
T cd03288 175 --SSILIMDEATASIDMATENILQKVVMTA-----F-ADRTVVTIAHRVSTILD-ADLVLVLSRGILVECDTP 238 (257)
T ss_pred --CCEEEEeCCccCCCHHHHHHHHHHHHHh-----c-CCCEEEEEecChHHHHh-CCEEEEEECCEEEEeCCH
Confidence 5899999999999999999999999876 2 47999999999999985 999999999999877654
No 325
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=4.5e-32 Score=273.04 Aligned_cols=195 Identities=27% Similarity=0.345 Sum_probs=161.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC------cccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS------APQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~------~~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++-..-++.+++++... .|++++++ +..|..++.+.+... ...++.+||+||++.+++.+|
T Consensus 17 ~~vs~~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (235)
T cd03261 17 KGVDLDVRRGEILAIIGPSG---SGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLT 93 (235)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCc
Confidence 89999999999999997522 45555432 233444333433321 123567999999999999999
Q ss_pred HHHHHHHhHHhc-CCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 389 PREHLEFYSRVR-NLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 389 v~E~L~~~~~~~-g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
+.||+.+....+ +.+..+..+++.++++.++|.+..++++.+|||||||||+||+||+.+|++|||||||+|||+.++.
T Consensus 94 v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~ 173 (235)
T cd03261 94 VFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASG 173 (235)
T ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHH
Confidence 999998865433 3344445567889999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 468 FLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 468 ~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
.++++|++++++ |+|||++|||++++..+|||+++|++|++++.|+++++..
T Consensus 174 ~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 174 VIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 999999999774 8999999999999999999999999999999999988753
No 326
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=99.98 E-value=1.7e-32 Score=304.55 Aligned_cols=210 Identities=20% Similarity=0.275 Sum_probs=163.9
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC-CeeEEEEccccC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV-SSGTAKIYDHDI 119 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~-~~G~v~~~g~~~ 119 (601)
.++..++++++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++| ++|+|+++|+++
T Consensus 258 ~~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~i~G~NGs--GKSTL------l~~l~G~~~~~~~G~i~~~g~~~ 325 (490)
T PRK10938 258 EPRIVLNNGVVSYND----RPILHNLSWQVNPGEHWQIVGPNGA--GKSTL------LSLITGDHPQGYSNDLTLFGRRR 325 (490)
T ss_pred CceEEEeceEEEECC----eeEEeeceEEEcCCCEEEEECCCCC--CHHHH------HHHHcCCCCcccCCeEEEecccC
Confidence 345679999999864 3489999999988 999999 56665 6799999886 799999999876
Q ss_pred CC--chHHhcccEEEEccCCCCCC--CCCHHHHHHHhHh----hcCCChHHHHHHHHHHHHHcCCCc-ccCCccccCChH
Q psy7365 120 RT--DMTTIRRSLGVCPQYNALFD--KLTVEEHMWFYSQ----LKQVPKDLAQLEISNMIGDLGIPH-KRTSLANTLSGG 190 (601)
Q Consensus 120 ~~--~~~~~~~~ig~v~Q~~~~~~--~~tv~e~l~~~~~----~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG 190 (601)
.. .....++.+||+||++.+++ ..++.+++.++.. .++......++++.++++.+||.+ ..++++.+||||
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG 405 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTADAPFHSLSWG 405 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhccCchhhCCHH
Confidence 32 22335678999999986544 3567666654321 111112334567889999999997 889999999999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
|||||++|||| +.+
T Consensus 406 q~qrv~la~al--------------------------------------~~~---------------------------- 419 (490)
T PRK10938 406 QQRLALIVRAL--------------------------------------VKH---------------------------- 419 (490)
T ss_pred HHHHHHHHHHH--------------------------------------hcC----------------------------
Confidence 99999865432 222
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHh-cCCEEEEecCCccccc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADL-LGDRIAIIAAGKLQCC 345 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~-l~Drv~vL~~GkIv~~ 345 (601)
|++|||||||+|||+.+++.++++|+++. +..+.|||++|||++++.. +||++++|.+|+++..
T Consensus 420 -------p~lllLDEPt~gLD~~~~~~l~~~L~~l~----~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~ 484 (490)
T PRK10938 420 -------PTLLILDEPLQGLDPLNRQLVRRFVDVLI----SEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRY 484 (490)
T ss_pred -------CCEEEEcCccccCCHHHHHHHHHHHHHHH----hcCCcEEEEEecchhhhhhhhheeEEEecCCceEEe
Confidence 58999999999999999999999999983 2223579999999999987 6999999999998654
No 327
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=99.98 E-value=4.6e-32 Score=290.77 Aligned_cols=196 Identities=20% Similarity=0.331 Sum_probs=165.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccCCCCCHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALNDRLTPREHL 393 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~~~lTv~E~L 393 (601)
+++++...-++.+++++... +|++++++ +..|+.++.+.++.. .+.++.+||+||++.+|+++||+||+
T Consensus 31 ~~vsl~i~~Ge~~~LlGpsG---sGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi 107 (375)
T PRK09452 31 SNLDLTINNGEFLTLLGPSG---CGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENV 107 (375)
T ss_pred eeeEEEEeCCCEEEEECCCC---CcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHH
Confidence 77788888889999997522 55555443 233444444444322 22357799999999999999999999
Q ss_pred HHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHH
Q psy7365 394 EFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCI 473 (601)
Q Consensus 394 ~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL 473 (601)
.|....++.+..+.+++++++++.++|.+..++++.+|||||||||+|||||+.+|++|||||||+|||+..+..+++.|
T Consensus 108 ~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L 187 (375)
T PRK09452 108 AFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNEL 187 (375)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHH
Confidence 99776666665566678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 474 ERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 474 ~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
+++.++ |.|+|++|||++|+..+||||++|++|+++..|+++++..+
T Consensus 188 ~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 188 KALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 998765 99999999999999999999999999999999999998653
No 328
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.2e-32 Score=290.76 Aligned_cols=196 Identities=22% Similarity=0.375 Sum_probs=166.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccCCCCCHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALNDRLTPREHL 393 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~~~lTv~E~L 393 (601)
+++++...-++.+++++... +|++++++ +..|..++.+.++.. .+.++.+||+||++.+|+++||.||+
T Consensus 36 ~~vsl~i~~Ge~~~llGpsG---sGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi 112 (377)
T PRK11607 36 DDVSLTIYKGEIFALLGASG---CGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNI 112 (377)
T ss_pred eeeEEEEcCCCEEEEECCCC---CcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHH
Confidence 78888888899999997522 55555433 233444444433322 23467899999999999999999999
Q ss_pred HHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHH
Q psy7365 394 EFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCI 473 (601)
Q Consensus 394 ~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL 473 (601)
.|..+.++.+..+.++++.++++.++|.++.++++.+|||||||||+|||||+.+|++|+|||||+|||+..+..+++.|
T Consensus 113 ~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l 192 (377)
T PRK11607 113 AFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEV 192 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 99876666666667778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 474 ERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 474 ~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
+++.++ |.|+|++|||++|+..+|||+++|++|+++..|+++++..+
T Consensus 193 ~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 193 VDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred HHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 998654 99999999999999999999999999999999999998653
No 329
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.98 E-value=4.2e-32 Score=275.86 Aligned_cols=175 Identities=22% Similarity=0.255 Sum_probs=145.0
Q ss_pred cceeecceEEeec-----------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHHhcccEEEEc
Q psy7365 66 SYGISDTSLEEQP-----------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCP 134 (601)
Q Consensus 66 ~~~~~~~~~~~~~-----------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~ 134 (601)
.+.++|++|++.+ +||||| ||||| .++|+|+++|++|+|.++|. .++|+|
T Consensus 7 ~~~~~~~~l~~~~~~i~~Ge~~~i~G~NGs--GKSTL------lk~L~G~~~p~~G~i~~~g~-----------~i~~~~ 67 (246)
T cd03237 7 KKTLGEFTLEVEGGSISESEVIGILGPNGI--GKTTF------IKMLAGVLKPDEGDIEIELD-----------TVSYKP 67 (246)
T ss_pred ccccCcEEEEEecCCcCCCCEEEEECCCCC--CHHHH------HHHHhCCCcCCCCeEEECCc-----------eEEEec
Confidence 3477888998863 999999 56665 57999999999999999884 589999
Q ss_pred cCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHh
Q psy7365 135 QYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFM 214 (601)
Q Consensus 135 Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~ 214 (601)
|++..++..||.|++.+.....+.. .....++++.+|+.+..++++.+||||||||+++|++|
T Consensus 68 q~~~~~~~~tv~e~l~~~~~~~~~~----~~~~~~~l~~l~l~~~~~~~~~~LSgGe~qrv~iaraL------------- 130 (246)
T cd03237 68 QYIKADYEGTVRDLLSSITKDFYTH----PYFKTEIAKPLQIEQILDREVPELSGGELQRVAIAACL------------- 130 (246)
T ss_pred ccccCCCCCCHHHHHHHHhhhcccc----HHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHH-------------
Confidence 9998888899999997654332211 23457889999999989999999999999999854432
Q ss_pred hhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHH
Q psy7365 215 NAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYS 294 (601)
Q Consensus 215 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~ 294 (601)
+.+ |+++||||||++||+.+
T Consensus 131 -------------------------~~~-----------------------------------p~llllDEPt~~LD~~~ 150 (246)
T cd03237 131 -------------------------SKD-----------------------------------ADIYLLDEPSAYLDVEQ 150 (246)
T ss_pred -------------------------hcC-----------------------------------CCEEEEeCCcccCCHHH
Confidence 222 58999999999999999
Q ss_pred HHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCC
Q psy7365 295 RRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAG 340 (601)
Q Consensus 295 ~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~G 340 (601)
+..++++|+++. +..|+|||++||+++++..+||++++|.++
T Consensus 151 ~~~l~~~l~~~~----~~~~~tiiivsHd~~~~~~~~d~i~~l~~~ 192 (246)
T cd03237 151 RLMASKVIRRFA----ENNEKTAFVVEHDIIMIDYLADRLIVFEGE 192 (246)
T ss_pred HHHHHHHHHHHH----HhcCCEEEEEeCCHHHHHHhCCEEEEEcCC
Confidence 999999999873 234899999999999999999999999653
No 330
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=99.98 E-value=5.4e-32 Score=288.48 Aligned_cols=201 Identities=20% Similarity=0.318 Sum_probs=167.0
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-ccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-PQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-~~~~~ig~v~Q~~~l~ 384 (601)
.+++++ +++++...-++.+++++... +|++++++ +..|+.++.+.++... ..++.+||+||++.+|
T Consensus 13 ~~~~~l---~~isl~i~~Ge~~~llGpsG---sGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~ 86 (353)
T PRK10851 13 GRTQVL---NDISLDIPSGQMVALLGPSG---SGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALF 86 (353)
T ss_pred CCeEEE---EEeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEecCcccC
Confidence 344554 88888888999999997522 45555432 3334444444443222 2356799999999999
Q ss_pred CCCCHHHHHHHhHHhc----CCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 385 DRLTPREHLEFYSRVR----NLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~----g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
+.+||+||+.|....+ +.+..+..+++.++++.++|.+..++++.+|||||||||+|||||+.+|++|||||||+|
T Consensus 87 p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~ 166 (353)
T PRK10851 87 RHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGA 166 (353)
T ss_pred CCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 9999999999876542 334455667899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||+.++..+++.|+++.++ |+|+|++|||++++..+||||++|++|+++..|+++++..
T Consensus 167 LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 167 LDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999876 8999999999999999999999999999999999999854
No 331
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=99.98 E-value=5.8e-32 Score=259.14 Aligned_cols=205 Identities=24% Similarity=0.353 Sum_probs=174.0
Q ss_pred cCCcEEEEEecchhHHHhcCCEEEEecC---CccccccC-ccccccccccccccccccCCccc----ccccccCCCCccc
Q psy7365 312 LSGRTVILTTHYMDEADLLGDRIAIIAA---GKLQCCGS-SVFLKNSFARGYYLSLDMKSAPQ----KSYIGYCPQFDAL 383 (601)
Q Consensus 312 ~~G~TVI~~tHdl~~~~~l~Drv~vL~~---GkIv~~G~-~~lLk~~~g~g~~igld~~~~~~----~~~ig~v~Q~~~l 383 (601)
+.++.|+ +++++-..-++.|.+++. ||..+..- .-+.++..++....+.|+...+. |..|||+||+++.
T Consensus 14 y~kr~Vv---~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SI 90 (243)
T COG1137 14 YKKRKVV---NDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIGYLPQEASI 90 (243)
T ss_pred hCCeeee---eeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcccccccchH
Confidence 3455665 999999999999999974 44332211 11345556666666777765543 4569999999999
Q ss_pred CCCCCHHHHHHHhHHhcCCChh--HHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCC
Q psy7365 384 NDRLTPREHLEFYSRVRNLPSV--LLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGM 461 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~~~g~~~~--~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGL 461 (601)
|..+||+||+.....++....+ +.+.+++++|+.|++.+.++++..+||||||||+.|||||+.+|+.++||||++|+
T Consensus 91 Fr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGV 170 (243)
T COG1137 91 FRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKFILLDEPFAGV 170 (243)
T ss_pred hhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCEEEecCCccCC
Confidence 9999999999988777664433 44456889999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 462 DPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 462 D~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||.+..++.++|+.|++.|..|+++-|+..|...+|||..+|.+|++.+.|+|+++.+
T Consensus 171 DPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~ 228 (243)
T COG1137 171 DPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVN 228 (243)
T ss_pred CchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999865
No 332
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=99.98 E-value=1.9e-32 Score=309.82 Aligned_cols=202 Identities=24% Similarity=0.371 Sum_probs=166.5
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++|+++.|+. ...++++|+||++.+ .||||| ||||| .++|+|+++|++|+|+++|.++.. +
T Consensus 339 i~~~~v~f~y~~--~~~~il~~i~~~i~~G~~~aivG~sGs--GKSTL------~~ll~g~~~p~~G~I~i~g~~i~~~~ 408 (574)
T PRK11160 339 LTLNNVSFTYPD--QPQPVLKGLSLQIKAGEKVALLGRTGC--GKSTL------LQLLTRAWDPQQGEILLNGQPIADYS 408 (574)
T ss_pred EEEEEEEEECCC--CCCcceecceEEECCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCEEhhhCC
Confidence 559999999742 234699999999998 999999 56655 579999999999999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCC----------ccccCChHHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTS----------LANTLSGGMQ 192 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~LSgG~~ 192 (601)
....|+.+|||||+|.+|. -|++||+.++.. .. ..+++.++++.+|+.+..++ ....||||||
T Consensus 409 ~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~~--~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~g~~LSgGqr 481 (574)
T PRK11160 409 EAALRQAISVVSQRVHLFS-ATLRDNLLLAAP--NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEGGRQLSGGEQ 481 (574)
T ss_pred HHHHHhheeEEcccchhhc-ccHHHHhhcCCC--cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCCCCCCCHHHH
Confidence 5667889999999999986 599999987642 12 23456778888888765443 5677999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++||+++.|
T Consensus 482 qRialARall~~-------------------------------------------------------------------- 493 (574)
T PRK11160 482 RRLGIARALLHD-------------------------------------------------------------------- 493 (574)
T ss_pred HHHHHHHHHhcC--------------------------------------------------------------------
Confidence 999866544333
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||++||+.+...+.+.|.++ .+++|+|++||+++.+. .||++++|++|+++..|+.
T Consensus 494 -----~~ililDE~ts~lD~~t~~~i~~~l~~~------~~~~tviiitHr~~~~~-~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 494 -----APLLLLDEPTEGLDAETERQILELLAEH------AQNKTVLMITHRLTGLE-QFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred -----CCEEEEeCCcccCCHHHHHHHHHHHHHH------cCCCEEEEEecChhHHH-hCCEEEEEeCCeEEEeCCH
Confidence 4899999999999999999999999886 25899999999998875 5999999999999887754
No 333
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.98 E-value=6e-33 Score=259.14 Aligned_cols=196 Identities=26% Similarity=0.371 Sum_probs=167.3
Q ss_pred cccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chHHhcccEE
Q psy7365 59 RDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMTTIRRSLG 131 (601)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~~~~~~ig 131 (601)
.++..++...|+++||.+.+ +||||| ||||| .|+++-+++|++|++++.|+++.+ .++..|..|+
T Consensus 9 ~~y~a~~a~il~~isl~v~~Ge~iaitGPSG~--GKStl------lk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~Vs 80 (223)
T COG4619 9 VGYLAGDAKILNNISLSVRAGEFIAITGPSGC--GKSTL------LKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVS 80 (223)
T ss_pred HHhhcCCCeeecceeeeecCCceEEEeCCCCc--cHHHH------HHHHHhccCCCCceEEEcCccccccChHHHHHHHH
Confidence 44666778899999999988 999999 57665 679999999999999999999976 5778899999
Q ss_pred EEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcc-cCCccccCChHHHhhhhchhhhcchhhHHHH
Q psy7365 132 VCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHK-RTSLANTLSGGMQRKLDNVKVWFNNKAWIAA 210 (601)
Q Consensus 132 ~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~ 210 (601)
||.|.|.+|++ ||++|+.|..+.+.-.. .+.+...+|+++++.+. .++.+.+||||||||++++
T Consensus 81 Y~~Q~paLfg~-tVeDNlifP~~~r~rr~--dr~aa~~llar~~l~~~~L~k~it~lSGGE~QriAli------------ 145 (223)
T COG4619 81 YCAQTPALFGD-TVEDNLIFPWQIRNRRP--DRAAALDLLARFALPDSILTKNITELSGGEKQRIALI------------ 145 (223)
T ss_pred HHHcCcccccc-chhhccccchHHhccCC--ChHHHHHHHHHcCCchhhhcchhhhccchHHHHHHHH------------
Confidence 99999999964 99999999887765332 23456789999999864 7999999999999997643
Q ss_pred HHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCC
Q psy7365 211 VSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGV 290 (601)
Q Consensus 211 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgL 290 (601)
|.+ ...|++|+||||||+|
T Consensus 146 ------------R~L-------------------------------------------------q~~P~ILLLDE~TsAL 164 (223)
T COG4619 146 ------------RNL-------------------------------------------------QFMPKILLLDEITSAL 164 (223)
T ss_pred ------------HHh-------------------------------------------------hcCCceEEecCchhhc
Confidence 321 1237999999999999
Q ss_pred CHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcc
Q psy7365 291 DPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKL 342 (601)
Q Consensus 291 D~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkI 342 (601)
|+...+.+-++|.++. ..+...++++|||-+++.+.+|+++-+.+|++
T Consensus 165 D~~nkr~ie~mi~~~v----~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~ 212 (223)
T COG4619 165 DESNKRNIEEMIHRYV----REQNVAVLWITHDKDQAIRHADKVITLQPGHA 212 (223)
T ss_pred ChhhHHHHHHHHHHHh----hhhceEEEEEecChHHHhhhhheEEEeccCcc
Confidence 9999999999999985 34688999999999999999999999998874
No 334
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=99.98 E-value=5.6e-32 Score=290.14 Aligned_cols=201 Identities=22% Similarity=0.350 Sum_probs=167.7
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-ccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-PQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-~~~~~ig~v~Q~~~l~ 384 (601)
.+++++ +++++...-++.+++++... +|++++++ +..|..++.+.+.... ..++.+||+||++.+|
T Consensus 14 ~~~~vl---~~vsl~i~~Ge~~~l~G~nG---sGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~ 87 (369)
T PRK11000 14 GDVVIS---KDINLDIHEGEFVVFVGPSG---CGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQSYALY 87 (369)
T ss_pred CCeEEE---eeeEEEEcCCCEEEEECCCC---CcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeCCcccC
Confidence 344544 88898888999999998532 55555443 2334443434333221 2346799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+||+||+.|....++.+..+.++++.++++.++|.+..++++.+|||||||||+||+||+.+|++|||||||+|||+.
T Consensus 88 ~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~ 167 (369)
T PRK11000 88 PHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAA 167 (369)
T ss_pred CCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 99999999998776666555556678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++.+++.|+++.++ |+|+|++|||++++..+|||+++|++|+++..|+++++..
T Consensus 168 ~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 168 LRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999998765 8999999999999999999999999999999999998854
No 335
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=99.98 E-value=1.2e-32 Score=314.13 Aligned_cols=209 Identities=28% Similarity=0.391 Sum_probs=166.4
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++|+++.|+..+ .++|+|+||++++ +|+||| ||||| .|+|.|+++|++|+|++||.|+.. +
T Consensus 472 I~~~nvsf~y~~~~--~~vL~~isL~I~~Ge~vaIvG~SGs--GKSTL------~KLL~gly~p~~G~I~~dg~dl~~i~ 541 (709)
T COG2274 472 IEFENVSFRYGPDD--PPVLEDLSLEIPPGEKVAIVGRSGS--GKSTL------LKLLLGLYKPQQGRILLDGVDLNDID 541 (709)
T ss_pred EEEEEEEEEeCCCC--cchhhceeEEeCCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCEeHHhcC
Confidence 34999999986543 3799999999998 999999 56655 479999999999999999999864 6
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHH-----HHHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLE-----ISNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
...+|+.||||+|++.+| .-|++||+.++.... +.+++.+. +.+.+..+ |...........||||||||+
T Consensus 542 ~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~p~~--~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrl 618 (709)
T COG2274 542 LASLRRQVGYVLQDPFLF-SGSIRENIALGNPEA--TDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRL 618 (709)
T ss_pred HHHHHhheeEEcccchhh-cCcHHHHHhcCCCCC--CHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHH
Confidence 778999999999999888 569999999865432 22222221 22334433 334445566788999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
+||||++ ++
T Consensus 619 alARaLl--------------------------------------~~--------------------------------- 627 (709)
T COG2274 619 ALARALL--------------------------------------SK--------------------------------- 627 (709)
T ss_pred HHHHHhc--------------------------------------cC---------------------------------
Confidence 8655433 33
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
|++||||||||+||+.+.+.+.+.|.++ ..|+|+|+++|+.+... .||||++|++|+++.+|+...+
T Consensus 628 --P~ILlLDEaTSaLD~~sE~~I~~~L~~~------~~~~T~I~IaHRl~ti~-~adrIiVl~~Gkiv~~gs~~el 694 (709)
T COG2274 628 --PKILLLDEATSALDPETEAIILQNLLQI------LQGRTVIIIAHRLSTIR-SADRIIVLDQGKIVEQGSHEEL 694 (709)
T ss_pred --CCEEEEeCcccccCHhHHHHHHHHHHHH------hcCCeEEEEEccchHhh-hccEEEEccCCceeccCCHHHH
Confidence 4899999999999999999999999987 36899999999987765 8999999999999999875443
No 336
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=99.98 E-value=3.5e-32 Score=267.77 Aligned_cols=175 Identities=23% Similarity=0.360 Sum_probs=145.1
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCC--CCCCeeEEEEccccCCCc-
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGM--LPVSSGTAKIYDHDIRTD- 122 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl--~~~~~G~v~~~g~~~~~~- 122 (601)
+++|++.|++ .++++|+||++.+ +||||| ||||| .++|+|+ ++|++|+|.++|.++...
T Consensus 3 ~~~l~~~~~~----~~~l~~is~~i~~Ge~~~i~G~nGs--GKStL------l~~l~G~~~~~p~~G~i~~~g~~~~~~~ 70 (200)
T cd03217 3 IKDLHVSVGG----KEILKGVNLTIKKGEVHALMGPNGS--GKSTL------AKTIMGHPKYEVTEGEILFKGEDITDLP 70 (200)
T ss_pred EEEEEEEeCC----EEeeeccceEECCCcEEEEECCCCC--CHHHH------HHHHhCCCcCCCCccEEEECCEECCcCC
Confidence 7899999863 4599999999988 999999 56665 6799999 589999999999988642
Q ss_pred hHH-hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhh
Q psy7365 123 MTT-IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVW 201 (601)
Q Consensus 123 ~~~-~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~ 201 (601)
... .+.+++|+||++.+|+.+++.+++ ++...+|||||+||+++||+|
T Consensus 71 ~~~~~~~~i~~v~q~~~~~~~~~~~~~l-------------------------------~~~~~~LS~G~~qrv~laral 119 (200)
T cd03217 71 PEERARLGIFLAFQYPPEIPGVKNADFL-------------------------------RYVNEGFSGGEKKRNEILQLL 119 (200)
T ss_pred HHHHhhCcEEEeecChhhccCccHHHHH-------------------------------hhccccCCHHHHHHHHHHHHH
Confidence 222 345699999999999999988876 122368999999999865433
Q ss_pred cchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEE
Q psy7365 202 FNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTV 281 (601)
Q Consensus 202 ~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~l 281 (601)
+ . +|+++
T Consensus 120 ~--------------------------------------~-----------------------------------~p~il 126 (200)
T cd03217 120 L--------------------------------------L-----------------------------------EPDLA 126 (200)
T ss_pred h--------------------------------------c-----------------------------------CCCEE
Confidence 2 2 25899
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHh-cCCEEEEecCCccccccC
Q psy7365 282 ILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADL-LGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 282 iLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~-l~Drv~vL~~GkIv~~G~ 347 (601)
||||||+|||+.++..+++.|+++. ..|+|+|++||+++++.. .||++++|.+|++...+.
T Consensus 127 llDEPt~~LD~~~~~~l~~~L~~~~-----~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~~ 188 (200)
T cd03217 127 ILDEPDSGLDIDALRLVAEVINKLR-----EEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSGD 188 (200)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHH-----HCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEcc
Confidence 9999999999999999999999873 348899999999999988 799999999999887663
No 337
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=99.98 E-value=3.6e-32 Score=307.03 Aligned_cols=208 Identities=27% Similarity=0.403 Sum_probs=170.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++++++.|+. +.++++|+||.+++ .||||| ||||+ .++|+|+++|++|+|.+||.++.. +
T Consensus 329 I~f~~vsf~y~~---~~~vl~~is~~i~~Ge~vaiVG~sGs--GKSTl------~~LL~r~~~~~~G~I~idg~dI~~i~ 397 (567)
T COG1132 329 IEFENVSFSYPG---KKPVLKDISFSIEPGEKVAIVGPSGS--GKSTL------IKLLLRLYDPTSGEILIDGIDIRDIS 397 (567)
T ss_pred EEEEEEEEEcCC---CCccccCceEEEcCCCEEEEECCCCC--CHHHH------HHHHhccCCCCCCeEEECCEehhhcC
Confidence 569999999874 45699999999988 899999 56654 579999999999999999999975 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHH-----HHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEI-----SNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
...+|+.||+|||+|.+|. -|++||+.++... .+.++..+.+ .+.++.+ |+....+.....||||||||+
T Consensus 398 ~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~~--at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrl 474 (567)
T COG1132 398 LDSLRKRIGIVSQDPLLFS-GTIRENIALGRPD--ATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRL 474 (567)
T ss_pred HHHHHHhccEEcccceeec-ccHHHHHhcCCCC--CCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHH
Confidence 6678999999999999996 8999999987543 3334443332 3445555 555555666678999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++|||++.|
T Consensus 475 aiARall~~----------------------------------------------------------------------- 483 (567)
T COG1132 475 AIARALLRN----------------------------------------------------------------------- 483 (567)
T ss_pred HHHHHHhcC-----------------------------------------------------------------------
Confidence 876554433
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
|+++|||||||+||+.+...+.+.+.++ .+|+|+++++|+++.+.. ||+|++|++|+++..|+...+
T Consensus 484 --~~ILILDEaTSalD~~tE~~I~~~l~~l------~~~rT~iiIaHRlsti~~-aD~IiVl~~G~i~e~G~h~eL 550 (567)
T COG1132 484 --PPILILDEATSALDTETEALIQDALKKL------LKGRTTLIIAHRLSTIKN-ADRIIVLDNGRIVERGTHEEL 550 (567)
T ss_pred --CCEEEEeccccccCHHhHHHHHHHHHHH------hcCCEEEEEeccHhHHHh-CCEEEEEECCEEEEecCHHHH
Confidence 4899999999999999999999999876 246899999999988887 999999999999998876543
No 338
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=7.2e-32 Score=268.90 Aligned_cols=199 Identities=29% Similarity=0.445 Sum_probs=163.5
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC--cccccccccCCCCccc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS--APQKSYIGYCPQFDAL 383 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~--~~~~~~ig~v~Q~~~l 383 (601)
.+++++ +++++...-++.+++++... .|++++++ +..|+.++.+.+... ...+++++|+||++.+
T Consensus 11 ~~~~il---~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~ 84 (220)
T cd03265 11 GDFEAV---RGVSFRVRRGEIFGLLGPNG---AGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQDLSV 84 (220)
T ss_pred CCEEee---eceeEEECCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecCCccc
Confidence 344544 89999999999999997522 45554432 223333333332211 1234679999999999
Q ss_pred CCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCH
Q psy7365 384 NDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDP 463 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~ 463 (601)
++.+|++||+.+....++....+..+++.++++.++|.+..++++.+||||||||++||+|++.+|+++||||||+|||+
T Consensus 85 ~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~ 164 (220)
T cd03265 85 DDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDP 164 (220)
T ss_pred cccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCH
Confidence 99999999999876666655555566789999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 464 GARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 464 ~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
.+++.++++|+++.++ |+|||++||+++++..+|||+++|++|+++..|+++++
T Consensus 165 ~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 165 QTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999876 89999999999999999999999999999999988765
No 339
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.98 E-value=4.9e-32 Score=307.45 Aligned_cols=201 Identities=19% Similarity=0.300 Sum_probs=163.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++++++.|+. +.++++|+||++++ .||||| ||||| .++|+|+++|++|+|.+||.++.. +
T Consensus 341 i~~~~v~f~y~~---~~~il~~i~l~i~~Ge~iaIvG~SGs--GKSTL------l~lL~gl~~p~~G~I~idg~~i~~~~ 409 (592)
T PRK10790 341 IDIDNVSFAYRD---DNLVLQNINLSVPSRGFVALVGHTGS--GKSTL------ASLLMGYYPLTEGEIRLDGRPLSSLS 409 (592)
T ss_pred EEEEEEEEEeCC---CCceeeceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhcccCCCCceEEECCEEhhhCC
Confidence 458999999852 24699999999988 999999 56665 579999999999999999999864 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-----------ccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-----------KRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgG~ 191 (601)
....++.++||||+|.+|+. |++||+.++. ..+. +++.++++.+|+.+ ........|||||
T Consensus 410 ~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~---~~~d----~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGq 481 (592)
T PRK10790 410 HSVLRQGVAMVQQDPVVLAD-TFLANVTLGR---DISE----EQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQ 481 (592)
T ss_pred HHHHHhheEEEccCCccccc-hHHHHHHhCC---CCCH----HHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHH
Confidence 56788999999999999976 9999998863 2333 33555666666443 2334456799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||||+.|
T Consensus 482 rQRialARaLl~~------------------------------------------------------------------- 494 (592)
T PRK10790 482 KQLLALARVLVQT------------------------------------------------------------------- 494 (592)
T ss_pred HHHHHHHHHHHhC-------------------------------------------------------------------
Confidence 9999876654433
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++|||||||+||+.+.+.+.+.|+++. .++|+|++||+++... .||+|++|++|+++..|+..
T Consensus 495 ------~~illlDEpts~LD~~t~~~i~~~l~~~~------~~~tvIivtHr~~~l~-~~D~ii~l~~G~i~~~G~~~ 559 (592)
T PRK10790 495 ------PQILILDEATANIDSGTEQAIQQALAAVR------EHTTLVVIAHRLSTIV-EADTILVLHRGQAVEQGTHQ 559 (592)
T ss_pred ------CCEEEEeCCcccCCHHHHHHHHHHHHHHh------CCCEEEEEecchHHHH-hCCEEEEEECCEEEEEcCHH
Confidence 48999999999999999999999998862 4699999999997766 69999999999999887643
No 340
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=99.98 E-value=7.6e-32 Score=268.36 Aligned_cols=192 Identities=19% Similarity=0.227 Sum_probs=147.3
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc---
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD--- 122 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~--- 122 (601)
+.++.+.|+.. .++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++...
T Consensus 3 ~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGs--GKSTL------l~~i~G~~~~~~G~i~~~g~~~~~~~~~ 71 (218)
T cd03290 3 VTNGYFSWGSG---LATLSNINIRIPTGQLTMIVGQVGC--GKSSL------LLAILGEMQTLEGKVHWSNKNESEPSFE 71 (218)
T ss_pred eeeeEEecCCC---CcceeeeEEEEcCCCEEEEECCCCC--CHHHH------HHHHhccCCCCCCeEEECCccccccccc
Confidence 45677776422 4699999999988 999999 56665 6799999999999999999877432
Q ss_pred --hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-----------ccCCccccCCh
Q psy7365 123 --MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-----------KRTSLANTLSG 189 (601)
Q Consensus 123 --~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSg 189 (601)
....++.+||+||++.+| ..|+.||+.++.. ... ++..++++.+++.+ ..++++.+|||
T Consensus 72 ~~~~~~~~~i~~~~q~~~~~-~~t~~~nl~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~ 143 (218)
T cd03290 72 ATRSRNRYSVAYAAQKPWLL-NATVEENITFGSP---FNK----QRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSG 143 (218)
T ss_pred ccchhhcceEEEEcCCCccc-cccHHHHHhhcCc---CCH----HHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCH
Confidence 123456799999999887 6799999987532 111 12334555556543 23567899999
Q ss_pred HHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHH
Q psy7365 190 GMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTV 269 (601)
Q Consensus 190 G~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~ 269 (601)
|||||+++||+|+ .
T Consensus 144 G~~qrv~laral~--------------------------------------~---------------------------- 157 (218)
T cd03290 144 GQRQRICVARALY--------------------------------------Q---------------------------- 157 (218)
T ss_pred HHHHHHHHHHHHh--------------------------------------h----------------------------
Confidence 9999998654432 2
Q ss_pred HHhhccCCCcEEEEecCCCCCCHHHHHHHHH--HHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 270 LFAMSFVPASTVILDEPTSGVDPYSRRSIWE--LLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 270 ~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~--~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
+|+++||||||+|||+.++..+++ ++..+ +..|.|+|++||+++++. .||++++|.+|.
T Consensus 158 -------~p~illlDEPt~~LD~~~~~~l~~~~ll~~~-----~~~~~tii~~sH~~~~~~-~~d~i~~l~~G~ 218 (218)
T cd03290 158 -------NTNIVFLDDPFSALDIHLSDHLMQEGILKFL-----QDDKRTLVLVTHKLQYLP-HADWIIAMKDGS 218 (218)
T ss_pred -------CCCEEEEeCCccccCHHHHHHHHHHHHHHHH-----hcCCCEEEEEeCChHHHh-hCCEEEEecCCC
Confidence 258999999999999999999998 55554 235899999999999985 699999998873
No 341
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=4.8e-32 Score=260.29 Aligned_cols=162 Identities=31% Similarity=0.512 Sum_probs=136.4
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-chH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DMT 124 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~~ 124 (601)
++++++.|+.. ..++++|+||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +..
T Consensus 3 ~~~l~~~~~~~--~~~~l~~i~~~i~~G~~~~l~G~nGs--GKstL------l~~i~G~~~~~~G~i~~~g~~~~~~~~~ 72 (171)
T cd03228 3 FKNVSFSYPGR--PKPVLKDVSLTIKPGEKVAIVGPSGS--GKSTL------LKLLLRLYDPTSGEILIDGVDLRDLDLE 72 (171)
T ss_pred EEEEEEEcCCC--CcccccceEEEEcCCCEEEEECCCCC--CHHHH------HHHHHcCCCCCCCEEEECCEEhhhcCHH
Confidence 68899988542 13589999999988 999999 56665 679999999999999999998753 334
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
..++.++|+||++.+|+ .|+.||+ ||||||||+++||+|
T Consensus 73 ~~~~~i~~~~~~~~~~~-~t~~e~l-------------------------------------LS~G~~~rl~la~al--- 111 (171)
T cd03228 73 SLRKNIAYVPQDPFLFS-GTIRENI-------------------------------------LSGGQRQRIAIARAL--- 111 (171)
T ss_pred HHHhhEEEEcCCchhcc-chHHHHh-------------------------------------hCHHHHHHHHHHHHH---
Confidence 45678999999998776 6999987 999999999754432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 112 -----------------------------------~~~-----------------------------------p~llllD 121 (171)
T cd03228 112 -----------------------------------LRD-----------------------------------PPILILD 121 (171)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEE
Confidence 222 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
|||+|||+.++..++++|.++ . +++|+|++||+++++.. ||++++|.+|+
T Consensus 122 EP~~gLD~~~~~~l~~~l~~~-----~-~~~tii~~sh~~~~~~~-~d~~~~l~~g~ 171 (171)
T cd03228 122 EATSALDPETEALILEALRAL-----A-KGKTVIVIAHRLSTIRD-ADRIIVLDDGR 171 (171)
T ss_pred CCCcCCCHHHHHHHHHHHHHh-----c-CCCEEEEEecCHHHHHh-CCEEEEEcCCC
Confidence 999999999999999999987 2 36899999999999987 99999999874
No 342
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=99.97 E-value=7.8e-32 Score=302.97 Aligned_cols=207 Identities=24% Similarity=0.372 Sum_probs=165.9
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++|+++.|+ +.+.++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. +
T Consensus 317 i~~~~v~~~y~--~~~~~~l~~~~~~i~~G~~~~ivG~sGs--GKSTL------~~ll~g~~~~~~G~i~~~g~~i~~~~ 386 (544)
T TIGR01842 317 LSVENVTIVPP--GGKKPTLRGISFRLQAGEALAIIGPSGS--GKSTL------ARLIVGIWPPTSGSVRLDGADLKQWD 386 (544)
T ss_pred EEEEEEEEEcC--CCCccccccceEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCceEEECCEehhhCC
Confidence 45899999974 2345689999999998 999999 56665 579999999999999999999864 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHH-----HHHHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQL-----EISNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
....++.++|+||+|.+|+. |++||+.++.. ..+.++..+ .+.+.++.+ |+....+....+||||||||+
T Consensus 387 ~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl 463 (544)
T TIGR01842 387 RETFGKHIGYLPQDVELFPG-TVAENIARFGE--NADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRI 463 (544)
T ss_pred HHHHhhheEEecCCcccccc-cHHHHHhccCC--CCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHH
Confidence 45678899999999999975 99999985432 123333222 234556666 666667778899999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++||||+.+
T Consensus 464 ~lARall~~----------------------------------------------------------------------- 472 (544)
T TIGR01842 464 ALARALYGD----------------------------------------------------------------------- 472 (544)
T ss_pred HHHHHHhcC-----------------------------------------------------------------------
Confidence 876554433
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||++||+.++..+.+.|.++. ..|+|+|++||+++.. ..||++++|++|+++..|+.
T Consensus 473 --~~ililDEpts~LD~~~~~~i~~~l~~~~-----~~~~tvi~ith~~~~~-~~~d~i~~l~~G~i~~~g~~ 537 (544)
T TIGR01842 473 --PKLVVLDEPNSNLDEEGEQALANAIKALK-----ARGITVVVITHRPSLL-GCVDKILVLQDGRIARFGER 537 (544)
T ss_pred --CCEEEEeCCccccCHHHHHHHHHHHHHHh-----hCCCEEEEEeCCHHHH-HhCCEEEEEECCEEEeeCCH
Confidence 58999999999999999999999998862 2589999999999865 57999999999999877753
No 343
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=99.97 E-value=6.2e-32 Score=266.31 Aligned_cols=188 Identities=26% Similarity=0.346 Sum_probs=143.4
Q ss_pred hhcccccccccCCC-ccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 51 LFESLSENRDKLGI-DSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
.+++|++.|+..+. ..++++++||++.+ +||||| ||||| .++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~--GKSTL------l~~i~G~~~~~~G~i~~~g------- 66 (204)
T cd03250 2 SVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGS--GKSSL------LSALLGELEKLSGSVSVPG------- 66 (204)
T ss_pred EEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCC--CHHHH------HHHHhCcCCCCCCeEEEcC-------
Confidence 37899999864211 13599999999988 999999 56665 5799999999999999998
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHH-----HHHHHHHc--CCCcccCCccccCChHHHhhhh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLE-----ISNMIGDL--GIPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~~ 196 (601)
.+||+||+|.+| ..|+.||+.+.... ..+..... +.+.++.+ |+....++.+.+||||||||++
T Consensus 67 -----~i~~~~q~~~l~-~~t~~enl~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~ 137 (204)
T cd03250 67 -----SIAYVSQEPWIQ-NGTIRENILFGKPF---DEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRIS 137 (204)
T ss_pred -----EEEEEecCchhc-cCcHHHHhccCCCc---CHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHH
Confidence 599999999988 57999999875432 21111110 11222222 3444567778999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+||+|+ .+
T Consensus 138 laral~--------------------------------------~~---------------------------------- 145 (204)
T cd03250 138 LARAVY--------------------------------------SD---------------------------------- 145 (204)
T ss_pred HHHHHh--------------------------------------cC----------------------------------
Confidence 654332 22
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHH-HHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWEL-LIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~-l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
|+++||||||++||+.+++.+++. +.+. ..+|.|||++||+++++.. ||++++|.+|+
T Consensus 146 -p~llllDEP~~~LD~~~~~~l~~~ll~~~-----~~~~~tvi~~sh~~~~~~~-~d~i~~l~~G~ 204 (204)
T cd03250 146 -ADIYLLDDPLSAVDAHVGRHIFENCILGL-----LLNNKTRILVTHQLQLLPH-ADQIVVLDNGR 204 (204)
T ss_pred -CCEEEEeCccccCCHHHHHHHHHHHHHHh-----ccCCCEEEEEeCCHHHHhh-CCEEEEEeCCC
Confidence 589999999999999999999884 5544 2348999999999999987 99999999884
No 344
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=99.97 E-value=4.8e-32 Score=313.62 Aligned_cols=201 Identities=24% Similarity=0.336 Sum_probs=160.9
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++|+++.|+. .+.++++|+||++++ +||||| ||||| .++|+|+++|++|+|.+||.++.. +
T Consensus 478 I~~~~vsf~y~~--~~~~vL~~isl~i~~Ge~vaIvG~sGs--GKSTL------lklL~gl~~p~~G~I~idg~~i~~~~ 547 (710)
T TIGR03796 478 VELRNITFGYSP--LEPPLIENFSLTLQPGQRVALVGGSGS--GKSTI------AKLVAGLYQPWSGEILFDGIPREEIP 547 (710)
T ss_pred EEEEEEEEecCC--CCCCcccceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCcEEEECCEeHHHCC
Confidence 458999999753 345799999999988 999999 56665 579999999999999999999864 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCC-----------CcccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGI-----------PHKRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~ 191 (601)
...+|+.+|||||+|.+|. -|++||+.++.. ..+.+ ++.++++..|+ ..........|||||
T Consensus 548 ~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~~--~~~~~----~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQ 620 (710)
T TIGR03796 548 REVLANSVAMVDQDIFLFE-GTVRDNLTLWDP--TIPDA----DLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQ 620 (710)
T ss_pred HHHHHhheeEEecCChhhh-ccHHHHhhCCCC--CCCHH----HHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHH
Confidence 5678999999999999984 699999987521 23333 33444444443 333344557799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++|||++++
T Consensus 621 rQRiaLARall~~------------------------------------------------------------------- 633 (710)
T TIGR03796 621 RQRLEIARALVRN------------------------------------------------------------------- 633 (710)
T ss_pred HHHHHHHHHHhhC-------------------------------------------------------------------
Confidence 9999876554433
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++|||||||+||+.+...+.+.|++ .++|+|++||+++.+. .||+|++|++|+++..|+..
T Consensus 634 ------p~iliLDEptS~LD~~te~~i~~~l~~--------~~~T~IiitHrl~~i~-~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 634 ------PSILILDEATSALDPETEKIIDDNLRR--------RGCTCIIVAHRLSTIR-DCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred ------CCEEEEECccccCCHHHHHHHHHHHHh--------cCCEEEEEecCHHHHH-hCCEEEEEeCCEEEEecCHH
Confidence 589999999999999999999999864 3799999999998876 59999999999999888654
No 345
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=99.97 E-value=1.4e-31 Score=278.34 Aligned_cols=237 Identities=22% Similarity=0.310 Sum_probs=192.4
Q ss_pred ccccccCCeeeeecCCCCCCccchhhhhcccccccccCCC-------ccceeecceEEeec------ccCCCCCCCcccc
Q psy7365 25 NIHKISGSEVTYVLPQDPASMGAYVSLFESLSENRDKLGI-------DSYGISDTSLEEQP------LGPSGITLGLHTL 91 (601)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~------~g~~g~~~g~~~~ 91 (601)
|-.+..-+|..-..|+.+ ..+..+...++|+..|.-.++ ...|++|+||+..+ .|-||| |||||
T Consensus 253 YTr~Ll~aeP~g~~~p~~-~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGS--GKsTl 329 (534)
T COG4172 253 YTRKLLAAEPSGDPPPLP-EDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGS--GKSTL 329 (534)
T ss_pred HHHHHHhcCCCCCCCCCC-CCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCC--CcchH
Confidence 334444444443333333 334566668999888853332 26789999999988 888999 67776
Q ss_pred chhhhHHHhccCCCCCCeeEEEEccccCCC----chHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcC--CChHHH
Q psy7365 92 GLEFVSRSMLMGMLPVSSGTAKIYDHDIRT----DMTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQ--VPKDLA 163 (601)
Q Consensus 92 g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~----~~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~--~~~~~~ 163 (601)
| + .|.+++++. |+|.++|.++.. .+..+|+++-+|||+| ++-|.+||.+-+.-++..++ .+..+.
T Consensus 330 G-----~-allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR 402 (534)
T COG4172 330 G-----L-ALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAER 402 (534)
T ss_pred H-----H-HHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHH
Confidence 4 3 778999876 999999999964 3455788999999999 59999999999998887764 567788
Q ss_pred HHHHHHHHHHcCCCc-ccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcC
Q psy7365 164 QLEISNMIGDLGIPH-KRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINH 242 (601)
Q Consensus 164 ~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 242 (601)
.+++.++|+.+||+. .++++|+++||||+||++|||| ++-
T Consensus 403 ~~rv~~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARA--------------------------------------liL- 443 (534)
T COG4172 403 DQRVIEALEEVGLDPATRNRYPHEFSGGQRQRIAIARA--------------------------------------LIL- 443 (534)
T ss_pred HHHHHHHHHHcCCChhHhhcCCcccCcchhhHHHHHHH--------------------------------------Hhc-
Confidence 889999999999985 5899999999999999875443 222
Q ss_pred CcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEec
Q psy7365 243 PMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTH 322 (601)
Q Consensus 243 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tH 322 (601)
.|++++||||||+||..-+..+.++|++++ ++.|.+-+|+||
T Consensus 444 ----------------------------------kP~~i~LDEPTSALD~SVQaQvv~LLr~LQ----~k~~LsYLFISH 485 (534)
T COG4172 444 ----------------------------------KPELILLDEPTSALDRSVQAQVLDLLRDLQ----QKHGLSYLFISH 485 (534)
T ss_pred ----------------------------------CCcEEEecCCchHhhHHHHHHHHHHHHHHH----HHhCCeEEEEec
Confidence 368999999999999999999999999995 346899999999
Q ss_pred chhHHHhcCCEEEEecCCccccccCc
Q psy7365 323 YMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 323 dl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+..+..+||+|+||.+|+|+..|..
T Consensus 486 DL~VvrAl~~~viVm~~GkiVE~G~~ 511 (534)
T COG4172 486 DLAVVRALCHRVIVMRDGKIVEQGPT 511 (534)
T ss_pred cHHHHHHhhceEEEEeCCEEeeeCCH
Confidence 99999999999999999999998865
No 346
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=99.97 E-value=3.1e-32 Score=314.44 Aligned_cols=203 Identities=27% Similarity=0.404 Sum_probs=163.2
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++|+++.|+ +...++++|+||++++ +||||| ||||| .++|+|+++|++|+|.+||.++.. +
T Consensus 464 I~~~~vsf~Y~--~~~~~vL~~i~l~i~~G~~iaIvG~sGs--GKSTL------lklL~gl~~p~~G~I~idg~~l~~~~ 533 (694)
T TIGR03375 464 IEFRNVSFAYP--GQETPALDNVSLTIRPGEKVAIIGRIGS--GKSTL------LKLLLGLYQPTEGSVLLDGVDIRQID 533 (694)
T ss_pred EEEEEEEEEeC--CCCccceeeeeEEECCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCEEhhhCC
Confidence 45999999974 3346799999999988 999999 56665 579999999999999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-----------cccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-----------HKRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgG~ 191 (601)
...+|+.+|||||+|.+|. -|++||+.++.. ..+.+ ++.++++..|+. .........|||||
T Consensus 534 ~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~~--~~~~~----~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQ 606 (694)
T TIGR03375 534 PADLRRNIGYVPQDPRLFY-GTLRDNIALGAP--YADDE----EILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQ 606 (694)
T ss_pred HHHHHhccEEECCChhhhh-hhHHHHHhCCCC--CCCHH----HHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHH
Confidence 5678899999999999986 599999987532 12333 344455555543 33344556899999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++|||++.+
T Consensus 607 rQRlalARall~~------------------------------------------------------------------- 619 (694)
T TIGR03375 607 RQAVALARALLRD------------------------------------------------------------------- 619 (694)
T ss_pred HHHHHHHHHHhcC-------------------------------------------------------------------
Confidence 9999866554333
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++|||||||+||+.+...+.+.|.++ .+++|+|++||+++.. ..||+|++|++|+++..|+..
T Consensus 620 ------p~iliLDE~Ts~LD~~te~~i~~~l~~~------~~~~T~iiItHrl~~~-~~~D~iivl~~G~i~e~G~~~ 684 (694)
T TIGR03375 620 ------PPILLLDEPTSAMDNRSEERFKDRLKRW------LAGKTLVLVTHRTSLL-DLVDRIIVMDNGRIVADGPKD 684 (694)
T ss_pred ------CCEEEEeCCCCCCCHHHHHHHHHHHHHH------hCCCEEEEEecCHHHH-HhCCEEEEEeCCEEEeeCCHH
Confidence 5899999999999999999999999886 2479999999999876 579999999999999887643
No 347
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=99.97 E-value=2.7e-31 Score=266.57 Aligned_cols=200 Identities=24% Similarity=0.362 Sum_probs=163.6
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc----cccccccCCCCc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP----QKSYIGYCPQFD 381 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~----~~~~ig~v~Q~~ 381 (601)
.++.++ +++++...-++.+++++... .|++++++ +..|+.++.+.+..... .++.++|+||++
T Consensus 11 ~~~~~l---~~vs~~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~ 84 (232)
T cd03218 11 GKRKVV---NGVSLSVKQGEIVGLLGPNG---AGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYLPQEA 84 (232)
T ss_pred CCEEee---ccceeEecCCcEEEEECCCC---CCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEecCCc
Confidence 344544 89999999999999997522 45555432 23344333333322111 235699999999
Q ss_pred ccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCC
Q psy7365 382 ALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGM 461 (601)
Q Consensus 382 ~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGL 461 (601)
.+++.+|++||+.+....++.......++++++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+||
T Consensus 85 ~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 164 (232)
T cd03218 85 SIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGV 164 (232)
T ss_pred cccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccC
Confidence 99999999999988655455444444567889999999998899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 462 DPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 462 D~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
|+.+++.++++|+++.++|+|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 165 D~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 165 DPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 999999999999999877999999999999999999999999999999999988764
No 348
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=2.7e-32 Score=272.05 Aligned_cols=215 Identities=25% Similarity=0.316 Sum_probs=183.0
Q ss_pred cceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHHhcccEEEEc-cCCC
Q psy7365 66 SYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCP-QYNA 138 (601)
Q Consensus 66 ~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~-Q~~~ 138 (601)
..|+.|+||++++ +||||| |||| | .|||+|++.|++|.|.++|.++.......-+.+|+|+ |..+
T Consensus 37 ~~AVqdisf~IP~G~ivgflGaNGA--GKST-----t-LKmLTGll~p~~G~v~V~G~~Pf~~~~~~~~~~~~v~gqk~q 108 (325)
T COG4586 37 IEAVQDISFEIPKGEIVGFLGANGA--GKST-----T-LKMLTGLLLPTSGKVRVNGKDPFRRREEYLRSIGLVMGQKLQ 108 (325)
T ss_pred hhhhheeeeecCCCcEEEEEcCCCC--cchh-----h-HHHHhCccccCCCeEEecCcCcchhHHHHHHHHHHHhhhhhe
Confidence 4499999999988 999999 5665 3 6899999999999999999988765555556788776 6667
Q ss_pred CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhh
Q psy7365 139 LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAAN 218 (601)
Q Consensus 139 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~ 218 (601)
+..++.+.+-+..-...|.+|.++-++|.+.+.+-++|+...+.+++.||-|||.|+.+|.
T Consensus 109 l~Wdlp~~ds~~v~~~Iy~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr~LSlGqRmraeLaa------------------- 169 (325)
T COG4586 109 LWWDLPALDSLEVLKLIYEIPDDEFAERLDFLTEILDLEGFLKWPVRKLSLGQRMRAELAA------------------- 169 (325)
T ss_pred eeeechhhhhHHHHHHHHhCCHHHHHHHHHHHHHHhcchhhhhhhhhhccchHHHHHHHHH-------------------
Confidence 8888889998888888899999999999999999999999999999999999999987421
Q ss_pred hhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHH
Q psy7365 219 NVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSI 298 (601)
Q Consensus 219 ~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l 298 (601)
+|+|+ |++|+|||||-|||..++..+
T Consensus 170 -------------------aLLh~-----------------------------------p~VLfLDEpTvgLDV~aq~~i 195 (325)
T COG4586 170 -------------------ALLHP-----------------------------------PKVLFLDEPTVGLDVNAQANI 195 (325)
T ss_pred -------------------HhcCC-----------------------------------CcEEEecCCccCcchhHHHHH
Confidence 24454 599999999999999999999
Q ss_pred HHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccccccccccccccccc
Q psy7365 299 WELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLKNSFARGYYLSLDM 365 (601)
Q Consensus 299 ~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~~~g~g~~igld~ 365 (601)
.+.+++.. ...+.||+++||+++-+..+||||++|+.|+++.+|+-..+...++....++...
T Consensus 196 r~Flke~n----~~~~aTVllTTH~~~di~~lc~rv~~I~~Gqlv~dg~l~~l~~~f~~~k~~~~el 258 (325)
T COG4586 196 REFLKEYN----EERQATVLLTTHIFDDIATLCDRVLLIDQGQLVFDGTLAQLQEQFGPYKEFSVEL 258 (325)
T ss_pred HHHHHHHH----HhhCceEEEEecchhhHHHhhhheEEeeCCcEeecccHHHHHHHhCCceEEEEEE
Confidence 99999874 3468999999999999999999999999999999987666666666554444433
No 349
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=99.97 E-value=1.1e-31 Score=255.52 Aligned_cols=189 Identities=20% Similarity=0.247 Sum_probs=168.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCcc------cccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSAP------QKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~~------~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++-...++.+.+.+... .|+++++ +++.|+.++.+.|+.... .|++||+||||..+.++.|
T Consensus 19 ~~vs~~i~~Gef~fl~GpSG---AGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~~t 95 (223)
T COG2884 19 RDVSFHIPKGEFVFLTGPSG---AGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPDRT 95 (223)
T ss_pred hCceEeecCceEEEEECCCC---CCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhheeeeEeeeccccccch
Confidence 88888888999999987532 4555554 345566666666554322 4789999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
|+||+.|.....|.+..+.++++.++|+.+||.+..+..|.+|||||||||+||||++++|++||-||||.+|||....+
T Consensus 96 vyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~ 175 (223)
T COG2884 96 VYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWE 175 (223)
T ss_pred HhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecC
Q psy7365 469 LWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 513 (601)
Q Consensus 469 i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~ 513 (601)
+++++.++.+.|+||++.|||.+.+..+--|++.+++|+++.+..
T Consensus 176 im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 176 IMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999999999999987654
No 350
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2e-31 Score=287.57 Aligned_cols=201 Identities=19% Similarity=0.269 Sum_probs=168.0
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc-------cccccccCCC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP-------QKSYIGYCPQ 379 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~-------~~~~ig~v~Q 379 (601)
|.++. -+++++-..-++.+++++... +|++++++ +..|..++.+.++.... .++++||+||
T Consensus 39 ~~~~~--L~~isl~i~~Gei~~LvG~NG---sGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q 113 (400)
T PRK10070 39 GLSLG--VKDASLAIEEGEIFVIMGLSG---SGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQ 113 (400)
T ss_pred CCeEE--EEeEEEEEcCCCEEEEECCCC---chHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEEC
Confidence 55533 389999999999999998532 55555443 33344444444433211 1357999999
Q ss_pred CcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 380 FDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 380 ~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
++.+|+.+|+.||+.+....++.+..+..+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+
T Consensus 114 ~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts 193 (400)
T PRK10070 114 SFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFS 193 (400)
T ss_pred CCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCc
Confidence 99999999999999987766666655556778999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||+.+++.+++.|+++.+ .|+|||++|||++++..+|||+++|++|+++..|+++++..
T Consensus 194 ~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~ 254 (400)
T PRK10070 194 ALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILN 254 (400)
T ss_pred cCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHh
Confidence 9999999999999999875 48999999999999999999999999999999999998854
No 351
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=99.97 E-value=4.5e-32 Score=307.03 Aligned_cols=204 Identities=20% Similarity=0.313 Sum_probs=160.7
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||++.|. +...++++|+||++.+ .||||+ ||||| .++|+|+++|++|+|+++|.++.. +
T Consensus 342 i~~~~vsf~y~--~~~~~il~~i~l~i~~G~~~aIvG~sGs--GKSTL------l~ll~gl~~p~~G~I~i~g~~i~~~~ 411 (582)
T PRK11176 342 IEFRNVTFTYP--GKEVPALRNINFKIPAGKTVALVGRSGS--GKSTI------ANLLTRFYDIDEGEILLDGHDLRDYT 411 (582)
T ss_pred EEEEEEEEecC--CCCCccccCceEEeCCCCEEEEECCCCC--CHHHH------HHHHHhccCCCCceEEECCEEhhhcC
Confidence 45999999974 2345699999999988 999999 56665 579999999999999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-----------ccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-----------KRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgG~ 191 (601)
....++.++||||++.+|+ -|++||+.++... ..+. +++.++++..|+.+ .......+|||||
T Consensus 412 ~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~~~-~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGq 485 (582)
T PRK11176 412 LASLRNQVALVSQNVHLFN-DTIANNIAYARTE-QYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQ 485 (582)
T ss_pred HHHHHhhceEEccCceeec-chHHHHHhcCCCC-CCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHH
Confidence 4567889999999999985 6999999875311 1222 34455555555332 2233346799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++|||++.+
T Consensus 486 rQRi~LARall~~------------------------------------------------------------------- 498 (582)
T PRK11176 486 RQRIAIARALLRD------------------------------------------------------------------- 498 (582)
T ss_pred HHHHHHHHHHHhC-------------------------------------------------------------------
Confidence 9999866544333
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++|||||||+||+.+...+.+.|.++ .+++|+|++||+++.. +.||+|++|++|+++..|+..
T Consensus 499 ------~~ililDEptsaLD~~t~~~i~~~l~~~------~~~~tvI~VtHr~~~~-~~~D~Ii~l~~g~i~e~g~~~ 563 (582)
T PRK11176 499 ------SPILILDEATSALDTESERAIQAALDEL------QKNRTSLVIAHRLSTI-EKADEILVVEDGEIVERGTHA 563 (582)
T ss_pred ------CCEEEEECccccCCHHHHHHHHHHHHHH------hCCCEEEEEecchHHH-HhCCEEEEEECCEEEEeCCHH
Confidence 4899999999999999999999999886 2479999999999765 469999999999999887643
No 352
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=6.7e-32 Score=265.10 Aligned_cols=202 Identities=20% Similarity=0.287 Sum_probs=169.2
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccccc-------ccccccccccccCC------cccccccccCCC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLKN-------SFARGYYLSLDMKS------APQKSYIGYCPQ 379 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~-------~~g~g~~igld~~~------~~~~~~ig~v~Q 379 (601)
.|++.+ +++++-..-++.|++++... .|++++++. +.+.....+.++.. ...|++|||++|
T Consensus 15 ~~~~aL---~~Vnl~I~~GE~VaiIG~SG---aGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ 88 (258)
T COG3638 15 GGHQAL---KDVNLEINQGEMVAIIGPSG---AGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRDIGMIFQ 88 (258)
T ss_pred CCceee---eeEeEEeCCCcEEEEECCCC---CcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHhceeEec
Confidence 456666 89999999999999998522 455555432 23333333333322 123678999999
Q ss_pred CcccCCCCCHHHHHHHh--------HHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCE
Q psy7365 380 FDALNDRLTPREHLEFY--------SRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPL 451 (601)
Q Consensus 380 ~~~l~~~lTv~E~L~~~--------~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~l 451 (601)
++++.+.+||.+|+..+ ..+.++..++.+..+-+.|+++|+.+++.++..+|||||||||+|||||+++|++
T Consensus 89 ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRVaIARaL~Q~pki 168 (258)
T COG3638 89 QFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSGGQQQRVAIARALVQQPKI 168 (258)
T ss_pred cCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHHHHHHHHhcCCCE
Confidence 99999999999999753 3456777777788899999999999999999999999999999999999999999
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 452 IFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 452 LlLDEPTsGLD~~~~~~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
++-|||+++|||.+.+.+++.|+++++ +|.|||++.|+++.+.++||||+-|++|+|+++|+++++.+.
T Consensus 169 ILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~~~ 238 (258)
T COG3638 169 ILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELTDE 238 (258)
T ss_pred EecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhhHH
Confidence 999999999999999999999999975 499999999999999999999999999999999999887543
No 353
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=99.97 E-value=9.2e-32 Score=263.56 Aligned_cols=184 Identities=20% Similarity=0.248 Sum_probs=149.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchH
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMT 124 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~ 124 (601)
.++++++.|+. . .+.++||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++....
T Consensus 3 ~~~~l~~~~~~----~-~l~~vs~~i~~Ge~~~l~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~g~~i~~~~- 68 (195)
T PRK13541 3 SLHQLQFNIEQ----K-NLFDLSITFLPSAITYIKGANGC--GKSSL------LRMIAGIMQPSSGNIYYKNCNINNIA- 68 (195)
T ss_pred EEEEeeEEECC----c-EEEEEEEEEcCCcEEEEECCCCC--CHHHH------HHHHhcCCCCCCcEEEECCcccChhh-
Confidence 47899999853 2 34459999988 999999 56665 67999999999999999999874321
Q ss_pred HhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcch
Q psy7365 125 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNN 204 (601)
Q Consensus 125 ~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~ 204 (601)
++.++|++|++.+++.+||.||+.++...++ ..+++.++++.+|+.+..++.+.+||||||||+++||++
T Consensus 69 --~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rl~la~al--- 138 (195)
T PRK13541 69 --KPYCTYIGHNLGLKLEMTVFENLKFWSEIYN-----SAETLYAAIHYFKLHDLLDEKCYSLSSGMQKIVAIARLI--- 138 (195)
T ss_pred --hhhEEeccCCcCCCccCCHHHHHHHHHHhcc-----cHHHHHHHHHHcCCHhhhccChhhCCHHHHHHHHHHHHH---
Confidence 3469999999988889999999988654432 134677889999999889999999999999999754432
Q ss_pred hhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEe
Q psy7365 205 KAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILD 284 (601)
Q Consensus 205 ~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLD 284 (601)
+.+ |+++|||
T Consensus 139 -----------------------------------~~~-----------------------------------p~~lllD 148 (195)
T PRK13541 139 -----------------------------------ACQ-----------------------------------SDLWLLD 148 (195)
T ss_pred -----------------------------------hcC-----------------------------------CCEEEEe
Confidence 232 5899999
Q ss_pred cCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEE
Q psy7365 285 EPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRI 334 (601)
Q Consensus 285 EPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv 334 (601)
|||+|||+.++..+++.|++. ...|.|+|++||+++++.. +|.+
T Consensus 149 EP~~~LD~~~~~~l~~~l~~~-----~~~~~tiii~sh~~~~i~~-~~~~ 192 (195)
T PRK13541 149 EVETNLSKENRDLLNNLIVMK-----ANSGGIVLLSSHLESSIKS-AQIL 192 (195)
T ss_pred CCcccCCHHHHHHHHHHHHHH-----HhCCCEEEEEeCCccccch-hhee
Confidence 999999999999999999764 2358999999999987764 5544
No 354
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=2e-31 Score=264.23 Aligned_cols=194 Identities=26% Similarity=0.376 Sum_probs=157.1
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~ 384 (601)
.+++++ +++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.++|+||++.++
T Consensus 11 ~~~~il---~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~ 84 (213)
T cd03259 11 GSVRAL---DDLSLTVEPGEFLALLGPSG---CGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQDYALF 84 (213)
T ss_pred CCeeee---cceeEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCchhhc
Confidence 344554 88999999999999998522 45554432 233333333333321 12346799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|++||+.+....++.......+++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.
T Consensus 85 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~ 164 (213)
T cd03259 85 PHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAK 164 (213)
T ss_pred cCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHH
Confidence 99999999988655444444445567889999999998889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
+++.++++|++++++ |+|||++|||++++..+|||+++|++|+++..|
T Consensus 165 ~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 165 LREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999998764 899999999999999999999999999998765
No 355
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=99.97 E-value=2.2e-31 Score=285.57 Aligned_cols=202 Identities=21% Similarity=0.290 Sum_probs=168.5
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------ccccccccccc----ccCCc---c----ccccc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSL----DMKSA---P----QKSYI 374 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igl----d~~~~---~----~~~~i 374 (601)
.|.+.++ |++++-..-++.+++++... .|++++++ ++.|+.++.+. +.... . .++++
T Consensus 34 ~g~~~~l--~~vsf~i~~Gei~~I~G~nG---sGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i 108 (382)
T TIGR03415 34 TGLVVGV--ANASLDIEEGEICVLMGLSG---SGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRV 108 (382)
T ss_pred hCCEEEE--EeeEEEEcCCCEEEEECCCC---CcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCE
Confidence 3555554 99999999999999997422 45555432 33344444332 22111 1 12579
Q ss_pred ccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEE
Q psy7365 375 GYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFL 454 (601)
Q Consensus 375 g~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlL 454 (601)
+|+||++.+++.+|+.||+.|.....+.++.+.++++.++++.++|.+..++++.+||||||||++||+||+.+|++|||
T Consensus 109 ~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLl 188 (382)
T TIGR03415 109 SMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLM 188 (382)
T ss_pred EEEECCCcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999887666766666667889999999999999999999999999999999999999999999
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 455 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 455 DEPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||||+||||.+++++++.|.++.++ |+|||++|||++++.++||||++|++|+++..|+++++..
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~ 254 (382)
T TIGR03415 189 DEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVL 254 (382)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 9999999999999999999999765 9999999999999999999999999999999999998854
No 356
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=1.4e-31 Score=299.99 Aligned_cols=192 Identities=24% Similarity=0.293 Sum_probs=158.5
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT 121 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~ 121 (601)
.+..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.
T Consensus 318 ~~l~~~~l~~~~~~----~~~l~~is~~i~~Ge~~~l~G~NGs--GKSTL------l~~i~G~~~p~~G~i~~~~~---- 381 (530)
T PRK15064 318 NALEVENLTKGFDN----GPLFKNLNLLLEAGERLAIIGENGV--GKTTL------LRTLVGELEPDSGTVKWSEN---- 381 (530)
T ss_pred ceEEEEeeEEeeCC----ceeecCcEEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEECCc----
Confidence 45679999999864 3589999999988 999999 56665 67999999999999999873
Q ss_pred chHHhcccEEEEccCCC--CCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhhhch
Q psy7365 122 DMTTIRRSLGVCPQYNA--LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKLDNV 198 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~~~~ 198 (601)
+.+||+||++. +++.+|+.||+.+... . ...+.++.++++.+|+. +..++++.+||||||||+++|
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~~----~-~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la 450 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWRQ----E-GDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFG 450 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhcc----C-CccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHH
Confidence 46999999974 5567999999875321 1 11235678899999995 678999999999999999754
Q ss_pred hhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCC
Q psy7365 199 KVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPA 278 (601)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 278 (601)
|++ +. +|
T Consensus 451 ~al--------------------------------------~~-----------------------------------~p 457 (530)
T PRK15064 451 KLM--------------------------------------MQ-----------------------------------KP 457 (530)
T ss_pred HHH--------------------------------------hc-----------------------------------CC
Confidence 432 22 25
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccc-cccC
Q psy7365 279 STVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQ-CCGS 347 (601)
Q Consensus 279 ~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv-~~G~ 347 (601)
++|||||||+|||+.+++.+++.|+++ +.|||++|||++++..+||++++|.+|+++ ..++
T Consensus 458 ~lllLDEPt~~LD~~~~~~l~~~l~~~--------~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~ 519 (530)
T PRK15064 458 NVLVMDEPTNHMDMESIESLNMALEKY--------EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGT 519 (530)
T ss_pred CEEEEcCCCCCCCHHHHHHHHHHHHHC--------CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCC
Confidence 899999999999999999999999864 349999999999999999999999999986 4443
No 357
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=99.97 E-value=3.2e-31 Score=286.21 Aligned_cols=200 Identities=20% Similarity=0.359 Sum_probs=164.7
Q ss_pred cCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCc
Q psy7365 312 LSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFD 381 (601)
Q Consensus 312 ~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~ 381 (601)
+.+++++ +++++...-++.+++++... .|++++++ +..|..++.+.+... ...++++||++|++
T Consensus 13 y~~~~vL---~~vs~~i~~Geiv~liGpNG---aGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~ 86 (402)
T PRK09536 13 FGDTTVL---DGVDLSVREGSLVGLVGPNG---AGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVASVPQDT 86 (402)
T ss_pred ECCEEEE---EeeEEEECCCCEEEEECCCC---chHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEEEccCC
Confidence 3455655 89999999999999997522 45555443 334444444544332 22357799999999
Q ss_pred ccCCCCCHHHHHHHhHHhc----CCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECC
Q psy7365 382 ALNDRLTPREHLEFYSRVR----NLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEP 457 (601)
Q Consensus 382 ~l~~~lTv~E~L~~~~~~~----g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEP 457 (601)
.+++.+|++||+.+....+ +......+++++++++.+++.+..++++.+||||||||++||+||+++|++||||||
T Consensus 87 ~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P~iLLLDEP 166 (402)
T PRK09536 87 SLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQATPVLLLDEP 166 (402)
T ss_pred CCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 9999999999998753211 111234456789999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 458 TSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 458 TsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
|+|||+.++.+++++|++++++|+|||++|||++++.++|||+++|++|+++..|+++++
T Consensus 167 tsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev 226 (402)
T PRK09536 167 TASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADV 226 (402)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999987799999999999999999999999999999999999974
No 358
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=99.97 E-value=4.7e-32 Score=313.60 Aligned_cols=202 Identities=25% Similarity=0.381 Sum_probs=161.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++|+++.|+. +.++++|+||++.+ .||||| ||||| .++|+|+++|++|+|++||.++.. +
T Consensus 474 I~~~~vsf~y~~---~~~iL~~isl~i~~G~~vaIvG~SGs--GKSTL------lklL~gl~~p~~G~I~idg~~i~~~~ 542 (708)
T TIGR01193 474 IVINDVSYSYGY---GSNILSDISLTIKMNSKTTIVGMSGS--GKSTL------AKLLVGFFQARSGEILLNGFSLKDID 542 (708)
T ss_pred EEEEEEEEEcCC---CCcceeceeEEECCCCEEEEECCCCC--CHHHH------HHHHhccCCCCCcEEEECCEEHHHcC
Confidence 458999999852 35699999999988 999999 56655 579999999999999999999864 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCC-----------CcccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGI-----------PHKRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~ 191 (601)
....|+.+|||||+|.+|.. |++||+.++.. ...+.+ ++.++++..|+ +.........|||||
T Consensus 543 ~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~-~~~~~~----~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQ 616 (708)
T TIGR01193 543 RHTLRQFINYLPQEPYIFSG-SILENLLLGAK-ENVSQD----EIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQ 616 (708)
T ss_pred HHHHHHheEEEecCceehhH-HHHHHHhccCC-CCCCHH----HHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHH
Confidence 56788899999999999865 99999988632 123333 23444444443 333345567899999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||||+.+
T Consensus 617 rQRialARall~~------------------------------------------------------------------- 629 (708)
T TIGR01193 617 KQRIALARALLTD------------------------------------------------------------------- 629 (708)
T ss_pred HHHHHHHHHHhhC-------------------------------------------------------------------
Confidence 9999876554433
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|++||||||||+||+.+...+.+.|.++ .|+|+|++||+++.+ ..||+|++|++|+++..|+..
T Consensus 630 ------p~iliLDE~Ts~LD~~te~~i~~~L~~~-------~~~T~IiitHr~~~~-~~~D~i~~l~~G~i~~~G~~~ 693 (708)
T TIGR01193 630 ------SKVLILDESTSNLDTITEKKIVNNLLNL-------QDKTIIFVAHRLSVA-KQSDKIIVLDHGKIIEQGSHD 693 (708)
T ss_pred ------CCEEEEeCccccCCHHHHHHHHHHHHHh-------cCCEEEEEecchHHH-HcCCEEEEEECCEEEEECCHH
Confidence 4899999999999999999999999864 478999999999876 579999999999999887643
No 359
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=99.97 E-value=3.8e-31 Score=266.17 Aligned_cols=195 Identities=23% Similarity=0.320 Sum_probs=159.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc----cccccccCCCCcccCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP----QKSYIGYCPQFDALNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~----~~~~ig~v~Q~~~l~~~lTv~ 390 (601)
+++++...-++.+++++... +|++++++ +..|+.++.+.+..... .++.++|+||++.+++.+|++
T Consensus 17 ~~vsl~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~ 93 (236)
T cd03219 17 DDVSFSVRPGEIHGLIGPNG---AGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVL 93 (236)
T ss_pred cCceEEecCCcEEEEECCCC---CCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHH
Confidence 88898888999999997522 45555433 23344333343332211 135699999999999999999
Q ss_pred HHHHHhHHhcCC----------ChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 391 EHLEFYSRVRNL----------PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 391 E~L~~~~~~~g~----------~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
||+.+.....+. ......+.+.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|
T Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 173 (236)
T cd03219 94 ENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAG 173 (236)
T ss_pred HHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999886543322 1233455788999999999889999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||+.+++.++++|++++++|+|||++|||++++..+|||+++|++|+++..|+++++..
T Consensus 174 LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 174 LNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999998789999999999999999999999999999999999988743
No 360
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=3e-31 Score=275.37 Aligned_cols=195 Identities=22% Similarity=0.326 Sum_probs=162.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-----ccccccccCCCCcc-cCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-----PQKSYIGYCPQFDA-LNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-----~~~~~ig~v~Q~~~-l~~~lT 388 (601)
.++++...-++.+++++... .|++++++ +..|..++.+.+.... ..++++||+||++. .+...|
T Consensus 24 ~~vs~~i~~Ge~~~i~G~nG---aGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~t 100 (287)
T PRK13637 24 DNVNIEIEDGEFVGLIGHTG---SGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEET 100 (287)
T ss_pred eeeEEEEcCCCEEEEECCCC---CcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHhhceEEEecCchhcccccc
Confidence 78888888999999997522 45555432 3334444445444321 23568999999974 334579
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC--cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALG--HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGAR 466 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~--~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~ 466 (601)
|+||+.|.....+.+..+..+++.++++.++|. +..++++.+||||||||++||+||+.+|++|||||||+|||+.++
T Consensus 101 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~ 180 (287)
T PRK13637 101 IEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGR 180 (287)
T ss_pred HHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHH
Confidence 999999876656666666667889999999997 678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 467 RFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 467 ~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
..++++|++++++ |+|||++|||++++..+||||++|++|++++.|+++++.+
T Consensus 181 ~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 181 DEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999765 9999999999999999999999999999999999999754
No 361
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=4.5e-31 Score=265.28 Aligned_cols=194 Identities=22% Similarity=0.305 Sum_probs=161.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+.... ..++.++|+||++.+++.+|
T Consensus 22 ~~~s~~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (233)
T cd03258 22 KDVSLSVPKGEIFGIIGRSG---AGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRT 98 (233)
T ss_pred ecceEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCc
Confidence 88999999999999997522 45554432 2334443444333221 12567999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
+.||+.+....++.......+.+.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.++..
T Consensus 99 ~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~ 178 (233)
T cd03258 99 VFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQS 178 (233)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHH
Confidence 99999886555555444455678899999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 469 LWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 469 i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
++++|++++++ |+|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 179 l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 179 ILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999765 899999999999999999999999999999999988774
No 362
>PRK13409 putative ATPase RIL; Provisional
Probab=99.97 E-value=3.1e-31 Score=299.67 Aligned_cols=194 Identities=20% Similarity=0.240 Sum_probs=159.8
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccC
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDI 119 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~ 119 (601)
+..+..++++++.|++. .++++||++.+ +||||+ ||||| .++|+|+++|++|+|.++
T Consensus 337 ~~~~l~~~~ls~~~~~~-----~l~~~s~~i~~Geiv~l~G~NGs--GKSTL------lk~L~Gl~~p~~G~I~~~---- 399 (590)
T PRK13409 337 RETLVEYPDLTKKLGDF-----SLEVEGGEIYEGEVIGIVGPNGI--GKTTF------AKLLAGVLKPDEGEVDPE---- 399 (590)
T ss_pred CceEEEEcceEEEECCE-----EEEecceEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCceEEEEe----
Confidence 34566799999988542 48999999987 999999 56665 579999999999999885
Q ss_pred CCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchh
Q psy7365 120 RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVK 199 (601)
Q Consensus 120 ~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~ 199 (601)
..+||+||++.+++++||.||+.++...++ . ...+.++++.+||.+..++++.+|||||||||++|+
T Consensus 400 --------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~~--~---~~~~~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAr 466 (590)
T PRK13409 400 --------LKISYKPQYIKPDYDGTVEDLLRSITDDLG--S---SYYKSEIIKPLQLERLLDKNVKDLSGGELQRVAIAA 466 (590)
T ss_pred --------eeEEEecccccCCCCCcHHHHHHHHhhhcC--h---HHHHHHHHHHCCCHHHHhCCcccCCHHHHHHHHHHH
Confidence 159999999988899999999987643222 1 234678999999999899999999999999998544
Q ss_pred hhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCc
Q psy7365 200 VWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPAS 279 (601)
Q Consensus 200 ~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 279 (601)
++ +. +|+
T Consensus 467 aL--------------------------------------~~-----------------------------------~p~ 473 (590)
T PRK13409 467 CL--------------------------------------SR-----------------------------------DAD 473 (590)
T ss_pred HH--------------------------------------hc-----------------------------------CCC
Confidence 32 22 258
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccC
Q psy7365 280 TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 347 (601)
Q Consensus 280 ~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~ 347 (601)
+|||||||+|||+.++..++++|+++. +..|+|+|++|||++++..+|||+++|.+ ++...|.
T Consensus 474 llLLDEPt~~LD~~~~~~l~~~l~~l~----~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 474 LYLLDEPSAHLDVEQRLAVAKAIRRIA----EEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHH----HhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 999999999999999999999999873 23589999999999999999999999964 6655443
No 363
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.7e-31 Score=267.17 Aligned_cols=201 Identities=21% Similarity=0.324 Sum_probs=162.4
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-ccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-PQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-~~~~~ig~v~Q~~~l~ 384 (601)
.++.++ +++++-..-++.+++++... .|++++++ +..|+.++.+.+.... ..++.++|+||++.++
T Consensus 13 ~~~~il---~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~ 86 (239)
T cd03296 13 GDFVAL---DDVSLDIPSGELVALLGPSG---SGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQHYALF 86 (239)
T ss_pred CCEEee---eeeeEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEecCCccc
Confidence 344544 89999999999999997522 45554433 2334443434333221 1246799999999999
Q ss_pred CCCCHHHHHHHhHHhcCC----ChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 385 DRLTPREHLEFYSRVRNL----PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~----~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
+.+|+.||+.+....++. ...+..+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|
T Consensus 87 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~~~ 166 (239)
T cd03296 87 RHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGA 166 (239)
T ss_pred CCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 899999999876544332 2233445688999999999888999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||+.+++.++++|++++++ |+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 167 LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 167 LDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 9999999999999999765 8999999999999999999999999999999999988753
No 364
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=99.97 E-value=9.5e-32 Score=310.99 Aligned_cols=203 Identities=21% Similarity=0.301 Sum_probs=159.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||++.|.+. .+.++++|+||++++ .||||| ||||| .++|.|+++|++|+|.+||.++.. +
T Consensus 479 I~~~nVsf~Y~~~-~~~~vL~~isl~i~~Ge~vaIvG~SGs--GKSTL------l~lL~gl~~p~~G~I~idg~~i~~~~ 549 (711)
T TIGR00958 479 IEFQDVSFSYPNR-PDVPVLKGLTFTLHPGEVVALVGPSGS--GKSTV------AALLQNLYQPTGGQVLLDGVPLVQYD 549 (711)
T ss_pred EEEEEEEEECCCC-CCCccccCceEEEcCCCEEEEECCCCC--CHHHH------HHHHHhccCCCCCEEEECCEEHHhcC
Confidence 5599999997532 135799999999998 999999 56655 579999999999999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-----------ccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-----------KRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgG~ 191 (601)
...+++.++||||+|.+|. -|++||+.++.. ..+. +++.++++..|+.+ ..+....+|||||
T Consensus 550 ~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~~--~~~~----e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQ 622 (711)
T TIGR00958 550 HHYLHRQVALVGQEPVLFS-GSVRENIAYGLT--DTPD----EEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQ 622 (711)
T ss_pred HHHHHhhceEEecCccccc-cCHHHHHhcCCC--CCCH----HHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHH
Confidence 5667889999999999885 699999987642 1222 33445566555443 2334456799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++|||++.+
T Consensus 623 kQRlalARALl~~------------------------------------------------------------------- 635 (711)
T TIGR00958 623 KQRIAIARALVRK------------------------------------------------------------------- 635 (711)
T ss_pred HHHHHHHHHHhcC-------------------------------------------------------------------
Confidence 9999876654433
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
|+++|||||||+||+.+...+.+ ... ..++|+|++||+++... .||+|++|++|+++..|+...
T Consensus 636 ------p~ILILDEpTSaLD~~te~~i~~-~~~-------~~~~TvIiItHrl~~i~-~aD~IivL~~G~ive~Gt~~e 699 (711)
T TIGR00958 636 ------PRVLILDEATSALDAECEQLLQE-SRS-------RASRTVLLIAHRLSTVE-RADQILVLKKGSVVEMGTHKQ 699 (711)
T ss_pred ------CCEEEEEccccccCHHHHHHHHH-hhc-------cCCCeEEEEeccHHHHH-hCCEEEEEECCEEEEeeCHHH
Confidence 48999999999999999988887 221 25899999999998765 699999999999998886543
No 365
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=99.97 E-value=2.4e-31 Score=303.04 Aligned_cols=199 Identities=27% Similarity=0.360 Sum_probs=169.7
Q ss_pred CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCC---eeEEEEccccCCCchHHhcccEEEEc
Q psy7365 64 IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVS---SGTAKIYDHDIRTDMTTIRRSLGVCP 134 (601)
Q Consensus 64 ~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~---~G~v~~~g~~~~~~~~~~~~~ig~v~ 134 (601)
+.+++|+|+|+++.+ +||||| ||||| .++|+|..+|. +|+|.++|.++. ....++.+||||
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGs--GKSTL------L~~L~g~~~~~~~~~G~i~~~g~~~~--~~~~~~~i~yv~ 105 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGA--GKTTL------MNALAFRSPKGVKGSGSVLLNGMPID--AKEMRAISAYVQ 105 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCC--CHHHH------HHHHhCCCCCCCcceeEEEECCEECC--HHHHhhhceeec
Confidence 357799999999998 999999 57665 67999999885 899999999874 234677899999
Q ss_pred cCCCCCCCCCHHHHHHHhHhhc---CCChHHHHHHHHHHHHHcCCCcccCCccc------cCChHHHhhhhchhhhcchh
Q psy7365 135 QYNALFDKLTVEEHMWFYSQLK---QVPKDLAQLEISNMIGDLGIPHKRTSLAN------TLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 135 Q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~------~LSgG~~qr~~~~~~~~~~~ 205 (601)
|++.+++.+||+||+.|.+.+. ++++++.+++++++++.+||.+..+..++ .||||||||+++|++|
T Consensus 106 Q~~~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL---- 181 (617)
T TIGR00955 106 QDDLFIPTLTVREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASEL---- 181 (617)
T ss_pred cccccCccCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHH----
Confidence 9999999999999999988754 23456667789999999999998888887 4999999999865433
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+.+ |++++|||
T Consensus 182 ----------------------------------~~~-----------------------------------p~vlllDE 192 (617)
T TIGR00955 182 ----------------------------------LTD-----------------------------------PPLLFCDE 192 (617)
T ss_pred ----------------------------------HcC-----------------------------------CCEEEeeC
Confidence 233 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchh-HHHhcCCEEEEecCCccccccCccc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMD-EADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~-~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
||+|||+.++..+.+.|+++. .+|+|+|+++|+.+ ++.+++|++++|.+|+++..|+...
T Consensus 193 PtsgLD~~~~~~l~~~L~~l~-----~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~ 253 (617)
T TIGR00955 193 PTSGLDSFMAYSVVQVLKGLA-----QKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQ 253 (617)
T ss_pred CCcchhHHHHHHHHHHHHHHH-----hCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHH
Confidence 999999999999999999983 35899999999995 7889999999999999998887543
No 366
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=99.97 E-value=3.8e-31 Score=323.37 Aligned_cols=212 Identities=21% Similarity=0.260 Sum_probs=178.3
Q ss_pred hhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCC---CCeeEEEEcccc
Q psy7365 48 YVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLP---VSSGTAKIYDHD 118 (601)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~---~~~G~v~~~g~~ 118 (601)
....++||++.+++.+....+|+|+|+++.+ +||||| ||||| .++|+|+.+ |++|+|.++|++
T Consensus 758 ~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGa--GKSTL------L~~Lag~~~~g~~~~G~I~i~G~~ 829 (1394)
T TIGR00956 758 DIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGA--GKTTL------LNVLAERVTTGVITGGDRLVNGRP 829 (1394)
T ss_pred ceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCC--CHHHH------HHHHhCCCCCCCcceeEEEECCEE
Confidence 3445899999987655567899999999998 999999 57665 679999998 789999999998
Q ss_pred CCCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc---CCChHHHHHHHHHHHHHcCCCcccCCccc----cCChHH
Q psy7365 119 IRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK---QVPKDLAQLEISNMIGDLGIPHKRTSLAN----TLSGGM 191 (601)
Q Consensus 119 ~~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~----~LSgG~ 191 (601)
+.. ..++.+|||+|++.+++.+||+||+.|.+..+ +.++++..++++++++.+||.+..++.++ +|||||
T Consensus 830 ~~~---~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~~LSgGq 906 (1394)
T TIGR00956 830 LDS---SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGEGLNVEQ 906 (1394)
T ss_pred CCh---hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCCCCCHHH
Confidence 742 35778999999998899999999999987654 24455666789999999999999999887 799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||++||++ ++.+
T Consensus 907 rqRl~Ia~a--------------------------------------L~~~----------------------------- 919 (1394)
T TIGR00956 907 RKRLTIGVE--------------------------------------LVAK----------------------------- 919 (1394)
T ss_pred hhHHHHHHH--------------------------------------HHcC-----------------------------
Confidence 999985433 2232
Q ss_pred hhccCCCc-EEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHH-HhcCCEEEEecCC-ccccccCc
Q psy7365 272 AMSFVPAS-TVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEA-DLLGDRIAIIAAG-KLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~-~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~-~~l~Drv~vL~~G-kIv~~G~~ 348 (601)
|+ +|+|||||+|||+.++..++++|+++. .+|+|||+++|+++.. ...+|++++|.+| +++..|+.
T Consensus 920 ------P~~iLlLDEPTsgLD~~~~~~i~~~L~~la-----~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~ 988 (1394)
T TIGR00956 920 ------PKLLLFLDEPTSGLDSQTAWSICKLMRKLA-----DHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDL 988 (1394)
T ss_pred ------CCeEEEEcCCCCCCCHHHHHHHHHHHHHHH-----HcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCc
Confidence 56 999999999999999999999999983 3589999999999974 5789999999987 98877754
No 367
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.4e-31 Score=278.35 Aligned_cols=195 Identities=20% Similarity=0.263 Sum_probs=160.6
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccC---------------------------C
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMK---------------------------S 367 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~---------------------------~ 367 (601)
+++++...-++.+++++... +|+++++ ++..|..++.+.+.. .
T Consensus 24 ~~vsl~i~~Ge~v~iiG~nG---sGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (305)
T PRK13651 24 DNVSVEINQGEFIAIIGQTG---SGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKI 100 (305)
T ss_pred eeeEEEEeCCCEEEEECCCC---CcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccccccccccccccccccchH
Confidence 88898888999999997522 4544433 223343333222210 0
Q ss_pred cccccccccCCCCc-ccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHH
Q psy7365 368 APQKSYIGYCPQFD-ALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIAL 445 (601)
Q Consensus 368 ~~~~~~ig~v~Q~~-~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL 445 (601)
...++.+||+||++ ..+...||+||+.|....++.+..+..+++.++++.+||. +..++++.+||||||||++||+||
T Consensus 101 ~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqrvalA~aL 180 (305)
T PRK13651 101 KEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQRSPFELSGGQKRRVALAGIL 180 (305)
T ss_pred HHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 12356799999986 3344579999999876666777666777899999999996 789999999999999999999999
Q ss_pred hCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 446 LGNTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 446 ~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+.+|++|||||||+|||+.++..++++|++++++|+|||++|||++++..+||||++|++|++++.|+++++..
T Consensus 181 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 181 AMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999998779999999999999999999999999999999999999864
No 368
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=5.2e-31 Score=271.13 Aligned_cols=202 Identities=20% Similarity=0.282 Sum_probs=164.8
Q ss_pred cCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc---c----cccccccC
Q psy7365 312 LSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA---P----QKSYIGYC 377 (601)
Q Consensus 312 ~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~---~----~~~~ig~v 377 (601)
+.+.+++ +++++...-++.+++++... .|++++++ +..|..++.+.+.... . .++.+||+
T Consensus 34 ~~~~~il---~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v 107 (269)
T cd03294 34 TGQTVGV---NDVSLDVREGEIFVIMGLSG---SGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMV 107 (269)
T ss_pred cCCceEe---eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEE
Confidence 3455555 89999999999999998522 45554432 2233333333332211 1 13579999
Q ss_pred CCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECC
Q psy7365 378 PQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEP 457 (601)
Q Consensus 378 ~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEP 457 (601)
||++.+++.+|+.||+.+.....+.......+++.++++.++|.+..++++.+||||||||++||+||+.+|++||||||
T Consensus 108 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEP 187 (269)
T cd03294 108 FQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEA 187 (269)
T ss_pred ecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999999999999998866555544444556788999999999889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 458 TSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 458 TsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|+|||+.+++.++++|+++.++ |+|||++||+++++..+||++++|++|+++..|+++++.+
T Consensus 188 t~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 188 FSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999998754 8999999999999999999999999999999999998864
No 369
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=99.97 E-value=4e-31 Score=299.78 Aligned_cols=201 Identities=26% Similarity=0.412 Sum_probs=159.3
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++++++.|+. ..++++|+||++.+ .||||| ||||| .++|+|+++|++|+|+++|.++.. +
T Consensus 335 I~~~~vsf~y~~---~~~iL~~inl~i~~G~~v~IvG~sGs--GKSTL------l~lL~gl~~p~~G~I~i~g~~i~~~~ 403 (588)
T PRK13657 335 VEFDDVSFSYDN---SRQGVEDVSFEAKPGQTVAIVGPTGA--GKSTL------INLLQRVFDPQSGRILIDGTDIRTVT 403 (588)
T ss_pred EEEEEEEEEeCC---CCceecceeEEECCCCEEEEECCCCC--CHHHH------HHHHhcCcCCCCCEEEECCEEhhhCC
Confidence 459999999852 24589999999988 999999 56665 579999999999999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCC-----------CcccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGI-----------PHKRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~ 191 (601)
...+++.++|+||+|.+|. -|++||+.++.. ..+.+ ++.++++.+|+ +.........|||||
T Consensus 404 ~~~~r~~i~~v~Q~~~lf~-~Ti~~Ni~~~~~--~~~d~----~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq 476 (588)
T PRK13657 404 RASLRRNIAVVFQDAGLFN-RSIEDNIRVGRP--DATDE----EMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGE 476 (588)
T ss_pred HHHHHhheEEEecCccccc-ccHHHHHhcCCC--CCCHH----HHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHH
Confidence 5667889999999999985 599999987632 22323 23344444443 333334456799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+++++
T Consensus 477 ~QRialARall~~------------------------------------------------------------------- 489 (588)
T PRK13657 477 RQRLAIARALLKD------------------------------------------------------------------- 489 (588)
T ss_pred HHHHHHHHHHhcC-------------------------------------------------------------------
Confidence 9999866554333
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++|||||||+||+.+...+++.|.++ ..++|+|++||+.+.+ +.||++++|++|++...|+.
T Consensus 490 ------~~iliLDEpts~LD~~t~~~i~~~l~~~------~~~~tvIiitHr~~~~-~~~D~ii~l~~G~i~~~g~~ 553 (588)
T PRK13657 490 ------PPILILDEATSALDVETEAKVKAALDEL------MKGRTTFIIAHRLSTV-RNADRILVFDNGRVVESGSF 553 (588)
T ss_pred ------CCEEEEeCCccCCCHHHHHHHHHHHHHH------hcCCEEEEEEecHHHH-HhCCEEEEEECCEEEEeCCH
Confidence 4899999999999999999999999876 2479999999999876 57999999999999877653
No 370
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=99.97 E-value=4.1e-31 Score=299.48 Aligned_cols=206 Identities=23% Similarity=0.311 Sum_probs=162.3
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..++|+++.|+. ..++++|+||++++ +||||+ ||||| .++|+|+++|++|+|.++|.++.. +
T Consensus 335 i~~~~v~~~y~~---~~~~l~~i~~~i~~G~~~~ivG~sGs--GKSTL------~~ll~g~~~~~~G~i~~~g~~~~~~~ 403 (585)
T TIGR01192 335 VEFRHITFEFAN---SSQGVFDVSFEAKAGQTVAIVGPTGA--GKTTL------INLLQRVYDPTVGQILIDGIDINTVT 403 (585)
T ss_pred EEEEEEEEECCC---CCccccceeEEEcCCCEEEEECCCCC--CHHHH------HHHHccCCCCCCCEEEECCEEhhhCC
Confidence 458999999853 23589999999988 999999 56665 579999999999999999998864 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHH-----HHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEI-----SNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
....++.+||+||+|.+|. .|++||+.++... .+.++....+ .+.+..+ |+....+.....||||||||+
T Consensus 404 ~~~~~~~i~~v~q~~~lf~-~ti~~Ni~~~~~~--~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl 480 (585)
T TIGR01192 404 RESLRKSIATVFQDAGLFN-RSIRENIRLGREG--ATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRL 480 (585)
T ss_pred HHHHHhheEEEccCCccCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHH
Confidence 4567889999999999885 6999999886322 2333332221 2223332 455556677889999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++||+|+ .+
T Consensus 481 ~lARall--------------------------------------~~--------------------------------- 489 (585)
T TIGR01192 481 AIARAIL--------------------------------------KN--------------------------------- 489 (585)
T ss_pred HHHHHHh--------------------------------------cC---------------------------------
Confidence 8655443 32
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++||||||++||+.+.+.+++.|.++ .+++|+|++||+.+.+. .||++++|++|+++..|+..
T Consensus 490 --p~ililDEpts~LD~~~~~~i~~~l~~~------~~~~tvI~isH~~~~~~-~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 490 --APILVLDEATSALDVETEARVKNAIDAL------RKNRTTFIIAHRLSTVR-NADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred --CCEEEEECCccCCCHHHHHHHHHHHHHH------hCCCEEEEEEcChHHHH-cCCEEEEEECCEEEEECCHH
Confidence 5899999999999999999999999876 24899999999998885 69999999999998777543
No 371
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=99.97 E-value=5.5e-31 Score=261.86 Aligned_cols=188 Identities=26% Similarity=0.458 Sum_probs=156.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC--cccccccccCCCCcccCCCCCHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS--APQKSYIGYCPQFDALNDRLTPREH 392 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~--~~~~~~ig~v~Q~~~l~~~lTv~E~ 392 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.+||+||++.+++.+|++||
T Consensus 22 ~~~sl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~ 98 (218)
T cd03266 22 DGVSFTVKPGEVTGLLGPNG---AGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAREN 98 (218)
T ss_pred cceEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHH
Confidence 88888888999999997522 45555433 233333333333221 1235679999999999999999999
Q ss_pred HHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHH
Q psy7365 393 LEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTC 472 (601)
Q Consensus 393 L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~l 472 (601)
+.+....++.+..+..+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.++++
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~ 178 (218)
T cd03266 99 LEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREF 178 (218)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHH
Confidence 99876666655555567789999999999889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 473 IERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 473 L~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
|+++.++|+|||++||+++++..+|||+++|++|+++..|
T Consensus 179 l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 179 IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999777999999999999999999999999999998754
No 372
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=99.97 E-value=2.1e-31 Score=257.81 Aligned_cols=194 Identities=20% Similarity=0.266 Sum_probs=162.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccccc------------ccccccccccccCC-----cccccccccCCCCcccC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLKN------------SFARGYYLSLDMKS-----APQKSYIGYCPQFDALN 384 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~------------~~g~g~~igld~~~-----~~~~~~ig~v~Q~~~l~ 384 (601)
++++.-..-....++|+... ||++++++. ..|+..+.|.++.. ...|++||+|||.|..|
T Consensus 24 ~~i~l~i~~~~VTAlIGPSG---cGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPF 100 (253)
T COG1117 24 KDINLDIPKNKVTALIGPSG---CGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPF 100 (253)
T ss_pred ccCceeccCCceEEEECCCC---cCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCC
Confidence 66666666667778887532 677766542 11233344444432 34589999999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC----cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~----~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
| +|++||+.|..+++|...++.++.++..|+...|+ +.+++.+..|||||||||+|||||+.+|+||+||||||+
T Consensus 101 p-~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSA 179 (253)
T COG1117 101 P-MSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSA 179 (253)
T ss_pred C-chHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccc
Confidence 8 99999999999999987777888899999998885 345678889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
|||.+...+-++|.+|+ +.-||+++||+|..+.+++|+.+++..|+++..|+.+++...
T Consensus 180 LDPIsT~kIEeLi~eLk-~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~ 238 (253)
T COG1117 180 LDPISTLKIEELITELK-KKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTN 238 (253)
T ss_pred cCchhHHHHHHHHHHHH-hccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcC
Confidence 99999999999999997 458999999999999999999999999999999999988653
No 373
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1e-30 Score=263.66 Aligned_cols=199 Identities=21% Similarity=0.270 Sum_probs=160.2
Q ss_pred cEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCc
Q psy7365 315 RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFD 381 (601)
Q Consensus 315 ~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~ 381 (601)
++++ +++++...-++.+++++... +|++++++ +..|..++.+.+.... ..++.++|+||++
T Consensus 14 ~~~l---~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~ 87 (241)
T cd03256 14 KKAL---KDVSLSINPGEFVALIGPSG---AGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQF 87 (241)
T ss_pred cEEE---ecceEEEcCCCEEEEECCCC---CCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhccEEEcccC
Confidence 4555 89999999999999998522 45554432 2334444444333221 2356799999999
Q ss_pred ccCCCCCHHHHHHHhHH--------hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEE
Q psy7365 382 ALNDRLTPREHLEFYSR--------VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIF 453 (601)
Q Consensus 382 ~l~~~lTv~E~L~~~~~--------~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLl 453 (601)
.+++.+|+.||+.+... +.+.......+++.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 88 ~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lll 167 (241)
T cd03256 88 NLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIARALMQQPKLIL 167 (241)
T ss_pred cccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999976421 1122223344568889999999988899999999999999999999999999999
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 454 LDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 454 LDEPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||||+|||+.+++.+++.|++++++ |+|||++|||++++..+|||+++|++|+++..|+++++.+
T Consensus 168 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 234 (241)
T cd03256 168 ADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELTD 234 (241)
T ss_pred EeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhhH
Confidence 99999999999999999999999764 8999999999999999999999999999999999988743
No 374
>KOG0058|consensus
Probab=99.97 E-value=1.8e-31 Score=295.66 Aligned_cols=208 Identities=24% Similarity=0.363 Sum_probs=168.3
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
.++|+||++.|... .+.++++|+||++.| .||||. ||| |+. ++|-.++.|++|+|.+||+|+.+
T Consensus 465 ~IeF~~VsFaYP~R-p~~~Vlk~lsfti~pGe~vALVGPSGs--GKS-----Tia-sLL~rfY~PtsG~IllDG~~i~~~ 535 (716)
T KOG0058|consen 465 VIEFEDVSFAYPTR-PDVPVLKNLSFTIRPGEVVALVGPSGS--GKS-----TIA-SLLLRFYDPTSGRILLDGVPISDI 535 (716)
T ss_pred eEEEEEeeeecCCC-CCchhhcCceeeeCCCCEEEEECCCCC--CHH-----HHH-HHHHHhcCCCCCeEEECCeehhhc
Confidence 45699999996433 267899999999999 999999 455 454 69999999999999999999976
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHH-----HHHHHHHHcC--CCcccCCccccCChHHHhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQL-----EISNMIGDLG--IPHKRTSLANTLSGGMQRK 194 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~g--l~~~~~~~~~~LSgG~~qr 194 (601)
++..+|+.||+|-|+|.+| .-|++|||.|+.. ..+.+++.. .+.+.+..|. ..-.-+.+..+||||||||
T Consensus 536 ~~~~lr~~Ig~V~QEPvLF-s~sI~eNI~YG~~--~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQR 612 (716)
T KOG0058|consen 536 NHKYLRRKIGLVGQEPVLF-SGSIRENIAYGLD--NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQR 612 (716)
T ss_pred CHHHHHHHeeeeeccceee-cccHHHHHhcCCC--CCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHH
Confidence 5667889999999999999 5699999999887 444444433 2334444442 2233456677999999999
Q ss_pred hhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhc
Q psy7365 195 LDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMS 274 (601)
Q Consensus 195 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 274 (601)
+||||||+.|
T Consensus 613 IAIARALlr~---------------------------------------------------------------------- 622 (716)
T KOG0058|consen 613 IAIARALLRN---------------------------------------------------------------------- 622 (716)
T ss_pred HHHHHHHhcC----------------------------------------------------------------------
Confidence 9876654443
Q ss_pred cCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 275 FVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 275 ~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|.+|||||-||+||.++...+.+.|.++ .+++|||++.|+++.+. .+|+|+++++|+++..|+-
T Consensus 623 ---P~VLILDEATSALDaeSE~lVq~aL~~~------~~~rTVlvIAHRLSTV~-~Ad~Ivvi~~G~V~E~G~h 686 (716)
T KOG0058|consen 623 ---PRVLILDEATSALDAESEYLVQEALDRL------MQGRTVLVIAHRLSTVR-HADQIVVIDKGRVVEMGTH 686 (716)
T ss_pred ---CCEEEEechhhhcchhhHHHHHHHHHHh------hcCCeEEEEehhhhHhh-hccEEEEEcCCeEEecccH
Confidence 4899999999999999999999999886 35799999999999886 7999999999999988854
No 375
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=99.97 E-value=7.5e-31 Score=260.00 Aligned_cols=194 Identities=22% Similarity=0.377 Sum_probs=158.2
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-ccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-PQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-~~~~~ig~v~Q~~~l~ 384 (601)
.++.++ +++++...-++.+++++... .|++++++ +..|+.++.+.+.... ..++.++|+||++.++
T Consensus 11 ~~~~~l---~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~ 84 (213)
T cd03301 11 GNVTAL---DDLNLDIADGEFVVLLGPSG---CGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALY 84 (213)
T ss_pred CCeeee---eceEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecChhhc
Confidence 344544 88999889999999997522 45555432 2233333333333211 1245799999999988
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|++||+.+....++....+.++++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.
T Consensus 85 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~ 164 (213)
T cd03301 85 PHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAK 164 (213)
T ss_pred cCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHH
Confidence 89999999988765555544555667889999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
+++.++++|++++++ |+|||++|||++++..+||++++|++|++++.|
T Consensus 165 ~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 165 LRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999764 899999999999999999999999999998865
No 376
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=99.97 E-value=6.4e-31 Score=296.08 Aligned_cols=192 Identities=26% Similarity=0.309 Sum_probs=156.7
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
.++..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.+++ ++
T Consensus 320 ~~~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~l~G~NGs--GKSTL------l~~l~G~~~p~~G~i~~~~-~~- 385 (552)
T TIGR03719 320 DKVIEAENLSKGFGD----KLLIDDLSFKLPPGGIVGVIGPNGA--GKSTL------FRMITGQEQPDSGTIKIGE-TV- 385 (552)
T ss_pred CeEEEEeeEEEEECC----eeeeccceEEEcCCCEEEEECCCCC--CHHHH------HHHHcCCCCCCCeEEEECC-ce-
Confidence 445679999999864 3599999999988 999999 56665 6799999999999999843 21
Q ss_pred CchHHhcccEEEEccCC-CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-ccCCccccCChHHHhhhhch
Q psy7365 121 TDMTTIRRSLGVCPQYN-ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-KRTSLANTLSGGMQRKLDNV 198 (601)
Q Consensus 121 ~~~~~~~~~ig~v~Q~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qr~~~~ 198 (601)
.+||+||++ .+++.+||.||+.++....+.... ..++.++++.+|+.. ..++++.+|||||||||++|
T Consensus 386 --------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la 455 (552)
T TIGR03719 386 --------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKR--EVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLA 455 (552)
T ss_pred --------EEEEEeCCccccCCCCcHHHHHHhhccccccCcc--hHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHH
Confidence 599999997 488899999999987543333322 224567899999974 57999999999999999754
Q ss_pred hhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCC
Q psy7365 199 KVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPA 278 (601)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 278 (601)
++ ++.+ |
T Consensus 456 ~a--------------------------------------l~~~-----------------------------------p 462 (552)
T TIGR03719 456 KT--------------------------------------LKSG-----------------------------------G 462 (552)
T ss_pred HH--------------------------------------HhhC-----------------------------------C
Confidence 33 2232 5
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecC-Cccc
Q psy7365 279 STVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAA-GKLQ 343 (601)
Q Consensus 279 ~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~-GkIv 343 (601)
+++||||||+|||+.+++.++++|.++ .| |||++|||++++..+||++++|.+ |++.
T Consensus 463 ~lllLDEPt~~LD~~~~~~l~~~l~~~-------~~-~viivsHd~~~~~~~~d~i~~l~~~~~~~ 520 (552)
T TIGR03719 463 NVLLLDEPTNDLDVETLRALEEALLEF-------AG-CAVVISHDRWFLDRIATHILAFEGDSHVE 520 (552)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHC-------CC-eEEEEeCCHHHHHHhCCEEEEEECCCeEE
Confidence 899999999999999999999999875 24 899999999999999999999986 4554
No 377
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=99.97 E-value=5e-31 Score=261.99 Aligned_cols=184 Identities=22% Similarity=0.318 Sum_probs=152.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+.... ..++.++|+||++.+++.+|
T Consensus 20 ~~isl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 96 (216)
T TIGR00960 20 DNLNFHITKGEMVFLVGHSG---AGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRT 96 (216)
T ss_pred EeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHhceEEecCcccccccc
Confidence 88888888999999997522 45555433 2333333333332211 13467999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
+.||+.+....++.......+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.
T Consensus 97 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~ 176 (216)
T TIGR00960 97 VYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRD 176 (216)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHH
Confidence 99999887655555444455678999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEE
Q psy7365 469 LWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 508 (601)
Q Consensus 469 i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~i 508 (601)
++++|++++++|+|||++|||++++..+|||+++|++|++
T Consensus 177 l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 177 IMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999977799999999999999999999999999974
No 378
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=8e-31 Score=261.37 Aligned_cols=189 Identities=21% Similarity=0.294 Sum_probs=156.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcccCCCCCHHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDALNDRLTPREHLE 394 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~~~lTv~E~L~ 394 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+.. ..++.++|+||++.+++.+|++||+.
T Consensus 21 ~~vs~~i~~G~~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~tv~e~l~ 95 (220)
T cd03293 21 EDISLSVEEGEFVALVGPSG---CGKSTLLRIIAGLERPTSGEVLVDGEPVT--GPGPDRGYVFQQDALLPWLTVLDNVA 95 (220)
T ss_pred eceeEEEeCCcEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEECc--cccCcEEEEecccccccCCCHHHHHH
Confidence 88898888999999997522 45555433 22333333333322 23567999999999999999999998
Q ss_pred HhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q psy7365 395 FYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIE 474 (601)
Q Consensus 395 ~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~ 474 (601)
+....++.+.....+.+.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.++++|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~ 175 (220)
T cd03293 96 LGLELQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELL 175 (220)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHH
Confidence 87655555444455678899999999988899999999999999999999999999999999999999999999999999
Q ss_pred HHHh-CCcEEEEEccChhHHHhhCCEEEEEe--CCEEEEecCHH
Q psy7365 475 RAVS-EGRCVILTSHNMEECEALCTKLTIMV--NGQFTCLGSAT 515 (601)
Q Consensus 475 ~l~~-~G~tVllsTHdl~e~~~l~drv~iL~--~G~iv~~G~~~ 515 (601)
++.+ .|+|||++||+++++..+||++++|+ +|+++..++.+
T Consensus 176 ~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 176 DIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred HHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 9865 48999999999999999999999999 79999887653
No 379
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=99.97 E-value=5.8e-31 Score=297.42 Aligned_cols=202 Identities=23% Similarity=0.311 Sum_probs=160.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++++++.|+. .+.++++|+||++++ +||||| ||||| .++|+|+++|++|+|.++|.++.. +
T Consensus 314 I~~~~v~~~y~~--~~~~~l~~i~~~i~~G~~~~ivG~sGs--GKSTL------l~ll~g~~~p~~G~i~~~g~~~~~~~ 383 (569)
T PRK10789 314 LDVNIRQFTYPQ--TDHPALENVNFTLKPGQMLGICGPTGS--GKSTL------LSLIQRHFDVSEGDIRFHDIPLTKLQ 383 (569)
T ss_pred EEEEEEEEECCC--CCCccccCeeEEECCCCEEEEECCCCC--CHHHH------HHHHhcccCCCCCEEEECCEEHhhCC
Confidence 458999988753 345699999999988 999999 56655 579999999999999999998864 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCC-----------CcccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGI-----------PHKRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~ 191 (601)
....++.++|+||+|.+|.. |++||+.++... .+.+ ++.++++..++ ....+....+|||||
T Consensus 384 ~~~~~~~i~~v~q~~~lf~~-ti~~Ni~~~~~~--~~~~----~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq 456 (569)
T PRK10789 384 LDSWRSRLAVVSQTPFLFSD-TVANNIALGRPD--ATQQ----EIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQ 456 (569)
T ss_pred HHHHHhheEEEccCCeeccc-cHHHHHhcCCCC--CCHH----HHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHH
Confidence 55678899999999999965 999999876321 2222 23344444443 334455667899999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+|+.+
T Consensus 457 ~qRi~lARall~~------------------------------------------------------------------- 469 (569)
T PRK10789 457 KQRISIARALLLN------------------------------------------------------------------- 469 (569)
T ss_pred HHHHHHHHHHhcC-------------------------------------------------------------------
Confidence 9999866544333
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++||||||++||+.+...+++.|+++ .+|+|+|++||+++... .||++++|++|+++..|+.
T Consensus 470 ------~~illlDEpts~LD~~~~~~i~~~l~~~------~~~~tii~itH~~~~~~-~~d~i~~l~~G~i~~~g~~ 533 (569)
T PRK10789 470 ------AEILILDDALSAVDGRTEHQILHNLRQW------GEGRTVIISAHRLSALT-EASEILVMQHGHIAQRGNH 533 (569)
T ss_pred ------CCEEEEECccccCCHHHHHHHHHHHHHH------hCCCEEEEEecchhHHH-cCCEEEEEeCCEEEEecCH
Confidence 5899999999999999999999999886 25899999999998765 6999999999999887754
No 380
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=99.97 E-value=2.3e-31 Score=300.42 Aligned_cols=203 Identities=24% Similarity=0.359 Sum_probs=161.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||++.|.. ...+.++|+||++.+ .||||+ ||||| .++|+|+++|++|+|.++|.++.. +
T Consensus 331 i~~~~v~f~y~~--~~~~il~~inl~i~~G~~v~IvG~sGs--GKSTL------l~lL~gl~~~~~G~I~i~g~~i~~~~ 400 (571)
T TIGR02203 331 VEFRNVTFRYPG--RDRPALDSISLVIEPGETVALVGRSGS--GKSTL------VNLIPRFYEPDSGQILLDGHDLADYT 400 (571)
T ss_pred EEEEEEEEEcCC--CCCccccCeeEEecCCCEEEEECCCCC--CHHHH------HHHHHhccCCCCCeEEECCEeHHhcC
Confidence 448999999743 235689999999988 999999 56665 579999999999999999999854 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCccc-----------CCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKR-----------TSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgG~ 191 (601)
...+++.++|+||+|.+|. -|++||+.++.. ...+ ++++.++++.+|+.+.. ......|||||
T Consensus 401 ~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~~-~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq 474 (571)
T TIGR02203 401 LASLRRQVALVSQDVVLFN-DTIANNIAYGRT-EQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQ 474 (571)
T ss_pred HHHHHhhceEEccCccccc-ccHHHHHhcCCC-CCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHH
Confidence 5567889999999999885 599999987631 0122 23455666666654332 23345799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+|+.+
T Consensus 475 rQRiaLARall~~------------------------------------------------------------------- 487 (571)
T TIGR02203 475 RQRLAIARALLKD------------------------------------------------------------------- 487 (571)
T ss_pred HHHHHHHHHHhcC-------------------------------------------------------------------
Confidence 9999876654433
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|++++||||||+||+.+.+.+.+.|.++ ..++|+|++||+.+.. ..||+|+++++|+++..|+.
T Consensus 488 ------~~illLDEpts~LD~~~~~~i~~~L~~~------~~~~tiIiitH~~~~~-~~~D~ii~l~~g~i~~~g~~ 551 (571)
T TIGR02203 488 ------APILILDEATSALDNESERLVQAALERL------MQGRTTLVIAHRLSTI-EKADRIVVMDDGRIVERGTH 551 (571)
T ss_pred ------CCEEEEeCccccCCHHHHHHHHHHHHHH------hCCCEEEEEehhhHHH-HhCCEEEEEeCCEEEeeCCH
Confidence 4899999999999999999999999876 2579999999999775 57999999999999877654
No 381
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=7.3e-32 Score=289.86 Aligned_cols=204 Identities=25% Similarity=0.390 Sum_probs=167.5
Q ss_pred hhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 49 VSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
...++|||++| ++...++++|+||++.+ +|+||| ||||| ..+|.|.++|++|+|+++|.++..
T Consensus 336 ~l~~~~vsF~y--~~~~~~~L~~~~l~l~~GEkvAIlG~SGs--GKSTl------lqLl~~~~~~~~G~i~~~g~~~~~l 405 (573)
T COG4987 336 ALELRNVSFTY--PGQQTKALKNFNLTLAQGEKVAILGRSGS--GKSTL------LQLLAGAWDPQQGSITLNGVEIASL 405 (573)
T ss_pred eeeeccceeec--CCCccchhhccceeecCCCeEEEECCCCC--CHHHH------HHHHHhccCCCCCeeeECCcChhhC
Confidence 45699999995 55667899999999988 999999 56665 579999999999999999999875
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCccc-----------CCccccCChH
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKR-----------TSLANTLSGG 190 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgG 190 (601)
+...++..+++++|.+.+| .-|+++|+.+.... .+ .+.+.++++.+||++.. +.-...||||
T Consensus 406 ~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~~~--As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGG 478 (573)
T COG4987 406 DEQALRETISVLTQRVHLF-SGTLRDNLRLANPD--AS----DEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGG 478 (573)
T ss_pred ChhhHHHHHhhhccchHHH-HHHHHHHHhhcCCC--CC----HHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCch
Confidence 3345788999999999998 56999999875432 22 23455677888876543 3345789999
Q ss_pred HHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHH
Q psy7365 191 MQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVL 270 (601)
Q Consensus 191 ~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~ 270 (601)
|+||++|||++++|
T Consensus 479 E~rRLAlAR~LL~d------------------------------------------------------------------ 492 (573)
T COG4987 479 ERRRLALARALLHD------------------------------------------------------------------ 492 (573)
T ss_pred HHHHHHHHHHHHcC------------------------------------------------------------------
Confidence 99999877665544
Q ss_pred HhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 271 FAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 271 ~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
++++||||||.||||.+.+++.+++.+- .+|+|+|++||++..+. .||||++|++|+++..|+..
T Consensus 493 -------apl~lLDEPTegLD~~TE~~vL~ll~~~------~~~kTll~vTHrL~~le-~~drIivl~~Gkiie~G~~~ 557 (573)
T COG4987 493 -------APLWLLDEPTEGLDPITERQVLALLFEH------AEGKTLLMVTHRLRGLE-RMDRIIVLDNGKIIEEGTHA 557 (573)
T ss_pred -------CCeEEecCCcccCChhhHHHHHHHHHHH------hcCCeEEEEecccccHh-hcCEEEEEECCeeeecCCHH
Confidence 3699999999999999999999998763 46999999999998887 79999999999999888654
No 382
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=99.97 E-value=4.9e-31 Score=251.66 Aligned_cols=153 Identities=22% Similarity=0.381 Sum_probs=130.3
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCc--
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTD-- 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~-- 122 (601)
.+++|++.|++ .++++++||++.+ +||||+ ||||| .++|+|+++|++|+|.++|.++...
T Consensus 2 ~~~~l~~~~~~----~~vl~~i~~~i~~Ge~~~l~G~nGs--GKSTL------l~~i~G~~~~~~G~v~~~g~~~~~~~~ 69 (163)
T cd03216 2 ELRGITKRFGG----VKALDGVSLSVRRGEVHALLGENGA--GKSTL------MKILSGLYKPDSGEILVDGKEVSFASP 69 (163)
T ss_pred EEEEEEEEECC----eEEEeeeEEEEeCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEECCEECCcCCH
Confidence 37899999853 3599999999988 999999 56665 5799999999999999999988642
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWF 202 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~ 202 (601)
....++.+||+|| ||||||||+++||+|+
T Consensus 70 ~~~~~~~i~~~~q---------------------------------------------------LS~G~~qrl~laral~ 98 (163)
T cd03216 70 RDARRAGIAMVYQ---------------------------------------------------LSVGERQMVEIARALA 98 (163)
T ss_pred HHHHhcCeEEEEe---------------------------------------------------cCHHHHHHHHHHHHHh
Confidence 2345678999999 9999999998654332
Q ss_pred chhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEE
Q psy7365 203 NNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVI 282 (601)
Q Consensus 203 ~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~li 282 (601)
.+ |+++|
T Consensus 99 --------------------------------------~~-----------------------------------p~ill 105 (163)
T cd03216 99 --------------------------------------RN-----------------------------------ARLLI 105 (163)
T ss_pred --------------------------------------cC-----------------------------------CCEEE
Confidence 22 58999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccc
Q psy7365 283 LDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQC 344 (601)
Q Consensus 283 LDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~ 344 (601)
|||||++||+.+++.+++.|+++. .+|.|+|++||+++++...||++++|.+|+++.
T Consensus 106 lDEP~~~LD~~~~~~l~~~l~~~~-----~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 106 LDEPTAALTPAEVERLFKVIRRLR-----AQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EECCCcCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999872 358999999999999999999999999998753
No 383
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.9e-31 Score=273.58 Aligned_cols=194 Identities=22% Similarity=0.275 Sum_probs=160.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------cccccccccCCCCc--ccCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------APQKSYIGYCPQFD--ALND 385 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------~~~~~~ig~v~Q~~--~l~~ 385 (601)
+++++...-++.+++++... .|++++++ +..|...+.+.++.. ...++++||+||++ .++
T Consensus 24 ~~vsl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~- 99 (290)
T PRK13634 24 YDVNVSIPSGSYVAIIGHTG---SGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLF- 99 (290)
T ss_pred eeEEEEEcCCCEEEEECCCC---CcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhh-
Confidence 89999999999999997522 45554432 233444444443321 12356799999986 344
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
..||+||+.|.....+.+..+..++++++++.++|. +..++++.+||||||||++||+||+.+|++|||||||+|||+.
T Consensus 100 ~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~ 179 (290)
T PRK13634 100 EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPK 179 (290)
T ss_pred hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHH
Confidence 479999999876555666666667889999999997 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++..++++|++++++ |.|||++|||++++..+||||++|++|++++.|+++++.+
T Consensus 180 ~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 180 GRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999765 9999999999999999999999999999999999998754
No 384
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.4e-31 Score=260.91 Aligned_cols=194 Identities=24% Similarity=0.321 Sum_probs=162.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc----ccccccccCCCCc--ccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA----PQKSYIGYCPQFD--ALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~----~~~~~ig~v~Q~~--~l~~~lT 388 (601)
+++++....+..+.+++... +|++++. ++..|..++.|...... ..++.|.+||||| ++.|..|
T Consensus 24 ~~VS~~i~~Ge~lgivGeSG---sGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~t 100 (252)
T COG1124 24 NNVSLEIERGETLGIVGESG---SGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRT 100 (252)
T ss_pred cceeEEecCCCEEEEEcCCC---CCHHHHHHHHhcccCCCCceEEECCcccCccccchhhccceeEEecCCccccCcchh
Confidence 77788888899999997532 5555432 34455555544333221 2467799999997 4889999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
|++.|.-.....|.+.. ++++.++|+.+||. .+++|+|.+|||||+||++|||||+.+|++||||||||+||+..+.
T Consensus 101 v~~~l~Epl~~~~~~~~--~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa 178 (252)
T COG1124 101 VGRILSEPLRPHGLSKS--QQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQA 178 (252)
T ss_pred HHHHHhhhhccCCccHH--HHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHH
Confidence 99999877666666543 34599999999997 6889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 468 FLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 468 ~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
++|+++.+++++ |.|+|++|||+..++.+||||++|++|+++..++.+++...
T Consensus 179 ~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 179 QILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999999999865 89999999999999999999999999999999999998765
No 385
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=99.97 E-value=7.2e-31 Score=251.23 Aligned_cols=156 Identities=30% Similarity=0.382 Sum_probs=131.1
Q ss_pred hcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCchHH
Q psy7365 52 FESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDMTT 125 (601)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~~~ 125 (601)
++++++.|++ +.++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.
T Consensus 3 ~~~~~~~~~~---~~~~l~~i~l~i~~Ge~~~i~G~nGs--GKSTL------l~~l~G~~~~~~G~i~~~~~-------- 63 (166)
T cd03223 3 LENLSLATPD---GRVLLKDLSFEIKPGDRLLITGPSGT--GKSSL------FRALAGLWPWGSGRIGMPEG-------- 63 (166)
T ss_pred EEEEEEEcCC---CCeeeecCeEEECCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCC--------
Confidence 7889998742 24599999999988 999999 56665 57999999999999999873
Q ss_pred hcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchh
Q psy7365 126 IRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNK 205 (601)
Q Consensus 126 ~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~ 205 (601)
+.++|+||++.++ ..|+.||+.++ .+.+||||||||+++||++
T Consensus 64 --~~i~~~~q~~~~~-~~tv~~nl~~~------------------------------~~~~LS~G~~~rv~laral---- 106 (166)
T cd03223 64 --EDLLFLPQRPYLP-LGTLREQLIYP------------------------------WDDVLSGGEQQRLAFARLL---- 106 (166)
T ss_pred --ceEEEECCCCccc-cccHHHHhhcc------------------------------CCCCCCHHHHHHHHHHHHH----
Confidence 5799999998765 67999999753 4689999999999865432
Q ss_pred hHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEec
Q psy7365 206 AWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDE 285 (601)
Q Consensus 206 ~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDE 285 (601)
+.+ |+++||||
T Consensus 107 ----------------------------------~~~-----------------------------------p~~lllDE 117 (166)
T cd03223 107 ----------------------------------LHK-----------------------------------PKFVFLDE 117 (166)
T ss_pred ----------------------------------HcC-----------------------------------CCEEEEEC
Confidence 222 58999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCc
Q psy7365 286 PTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGK 341 (601)
Q Consensus 286 PtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~Gk 341 (601)
||++||+.+++.+.++++++ +.|+|++||+.++. ..||++++|++|.
T Consensus 118 Pt~~LD~~~~~~l~~~l~~~--------~~tiiivsh~~~~~-~~~d~i~~l~~~~ 164 (166)
T cd03223 118 ATSALDEESEDRLYQLLKEL--------GITVISVGHRPSLW-KFHDRVLDLDGEG 164 (166)
T ss_pred CccccCHHHHHHHHHHHHHh--------CCEEEEEeCChhHH-hhCCEEEEEcCCC
Confidence 99999999999999999864 58999999999865 6999999998754
No 386
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=99.97 E-value=7.8e-31 Score=295.58 Aligned_cols=192 Identities=26% Similarity=0.303 Sum_probs=156.6
Q ss_pred chhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCC
Q psy7365 47 AYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIR 120 (601)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~ 120 (601)
.++..+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.+++ ++
T Consensus 322 ~~~l~~~~l~~~~~~----~~~l~~isl~i~~Ge~~~l~G~NGs--GKSTL------l~~i~G~~~p~~G~i~~~~-~~- 387 (556)
T PRK11819 322 DKVIEAENLSKSFGD----RLLIDDLSFSLPPGGIVGIIGPNGA--GKSTL------FKMITGQEQPDSGTIKIGE-TV- 387 (556)
T ss_pred CeEEEEEeEEEEECC----eeeecceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEECC-ce-
Confidence 345679999999864 3599999999988 999999 56665 6799999999999999843 21
Q ss_pred CchHHhcccEEEEccCC-CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-ccCCccccCChHHHhhhhch
Q psy7365 121 TDMTTIRRSLGVCPQYN-ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-KRTSLANTLSGGMQRKLDNV 198 (601)
Q Consensus 121 ~~~~~~~~~ig~v~Q~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qr~~~~ 198 (601)
.+||+||++ .+++.+||.||+.++....+..... .++.++++.+|+.. ..++++++||||||||+++|
T Consensus 388 --------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~--~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 457 (556)
T PRK11819 388 --------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNRE--IPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLA 457 (556)
T ss_pred --------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccH--HHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHH
Confidence 599999997 6888999999999875443332222 23457899999974 57999999999999999754
Q ss_pred hhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCC
Q psy7365 199 KVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPA 278 (601)
Q Consensus 199 ~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 278 (601)
+++ +. +|
T Consensus 458 ~al--------------------------------------~~-----------------------------------~p 464 (556)
T PRK11819 458 KTL--------------------------------------KQ-----------------------------------GG 464 (556)
T ss_pred HHH--------------------------------------hc-----------------------------------CC
Confidence 332 22 25
Q ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecC-Cccc
Q psy7365 279 STVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAA-GKLQ 343 (601)
Q Consensus 279 ~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~-GkIv 343 (601)
++|||||||+|||+.++..++++|.++ .| |||++|||++++..+||++++|.+ |++.
T Consensus 465 ~lllLDEPt~~LD~~~~~~l~~~l~~~-------~~-tvi~vtHd~~~~~~~~d~i~~l~~~g~~~ 522 (556)
T PRK11819 465 NVLLLDEPTNDLDVETLRALEEALLEF-------PG-CAVVISHDRWFLDRIATHILAFEGDSQVE 522 (556)
T ss_pred CEEEEcCCCCCCCHHHHHHHHHHHHhC-------CC-eEEEEECCHHHHHHhCCEEEEEECCCeEE
Confidence 899999999999999999999999875 24 899999999999999999999986 6654
No 387
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.7e-30 Score=262.88 Aligned_cols=195 Identities=23% Similarity=0.406 Sum_probs=160.8
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCcccCCCCCHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFDALNDRLTPRE 391 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~l~~~lTv~E 391 (601)
+++++....++.+++++... .|++++++ +..|+..+.+.+... ...++.++|+||++.+++.+|++|
T Consensus 18 ~~is~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e 94 (242)
T cd03295 18 NNLNLEIAKGEFLVLIGPSG---SGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEE 94 (242)
T ss_pred eeeEEEECCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHH
Confidence 88999999999999998522 45554432 223333333333221 123467999999999999999999
Q ss_pred HHHHhHHhcCCChhHHHHHHHHHHHHcCCCc--ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHH
Q psy7365 392 HLEFYSRVRNLPSVLLNTIVNESLNKFALGH--YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFL 469 (601)
Q Consensus 392 ~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~--~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i 469 (601)
|+.++..+.+.......+++.++++.+++.+ ..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.+
T Consensus 95 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l 174 (242)
T cd03295 95 NIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQL 174 (242)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHH
Confidence 9988765555544455567889999999985 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 470 WTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 470 ~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++.|++++++ |+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 175 ~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 175 QEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred HHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999765 8999999999999999999999999999999999988753
No 388
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=99.97 E-value=5.2e-31 Score=304.28 Aligned_cols=207 Identities=25% Similarity=0.383 Sum_probs=163.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++++++.|+. ...++++|+||++++ +||||| ||||| .++|+|+++|++|+|+++|.++.. +
T Consensus 456 i~~~~vsf~y~~--~~~~il~~i~l~i~~G~~vaivG~sGs--GKSTL------~~ll~g~~~p~~G~I~idg~~i~~~~ 525 (694)
T TIGR01846 456 ITFENIRFRYAP--DSPEVLSNLNLDIKPGEFIGIVGPSGS--GKSTL------TKLLQRLYTPQHGQVLVDGVDLAIAD 525 (694)
T ss_pred EEEEEEEEEcCC--CCccccccceEEECCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCceEEECCEehhhCC
Confidence 458999999752 335689999999988 999999 56655 579999999999999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHH-----HHHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLE-----ISNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
...+|+.+|||||++.+|. .|++||+.++.. ..+.++..+. +.+.++.+ |++........+||||||||+
T Consensus 526 ~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~~--~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri 602 (694)
T TIGR01846 526 PAWLRRQMGVVLQENVLFS-RSIRDNIALCNP--GAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRI 602 (694)
T ss_pred HHHHHHhCeEEccCCeehh-hhHHHHHhcCCC--CCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHH
Confidence 5667889999999999885 599999987532 2333332221 22334443 445445566788999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++||||+ .+
T Consensus 603 ~lARall--------------------------------------~~--------------------------------- 611 (694)
T TIGR01846 603 AIARALV--------------------------------------GN--------------------------------- 611 (694)
T ss_pred HHHHHHH--------------------------------------hC---------------------------------
Confidence 8655433 22
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|+++||||||++||+.+...+.+.|.++ ..++|+|++||+++.+. .||++++|++|+++..|+..
T Consensus 612 --~~ililDEpts~LD~~~~~~i~~~l~~~------~~~~t~i~itH~~~~~~-~~d~ii~l~~G~i~~~g~~~ 676 (694)
T TIGR01846 612 --PRILIFDEATSALDYESEALIMRNMREI------CRGRTVIIIAHRLSTVR-ACDRIIVLEKGQIAESGRHE 676 (694)
T ss_pred --CCEEEEECCCcCCCHHHHHHHHHHHHHH------hCCCEEEEEeCChHHHH-hCCEEEEEeCCEEEEeCCHH
Confidence 5899999999999999999999999886 25799999999998875 59999999999999887643
No 389
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=99.97 E-value=1.3e-30 Score=275.74 Aligned_cols=196 Identities=21% Similarity=0.280 Sum_probs=162.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCc--ccCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFD--ALNDR 386 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~--~l~~~ 386 (601)
+++++...-++.+++++... +|++++++ ...|+.++.|.++... ..+++++|+||++ .+++.
T Consensus 38 ~~vsl~i~~Ge~~~lvG~sG---sGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~ 114 (331)
T PRK15079 38 DGVTLRLYEGETLGVVGESG---CGKSTFARAIIGLVKATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPR 114 (331)
T ss_pred eeEEEEEcCCCEEEEECCCC---CCHHHHHHHHHCCCCCCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCC
Confidence 88999999999999997522 45544332 3334444445444321 1356799999997 58889
Q ss_pred CCHHHHHHHhHHhc--CCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCH
Q psy7365 387 LTPREHLEFYSRVR--NLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDP 463 (601)
Q Consensus 387 lTv~E~L~~~~~~~--g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~ 463 (601)
+|+.||+.+....+ +.+..+.++++.++++.++|. +..++++.+||||||||++||+||+.+|++||+||||+|||+
T Consensus 115 ~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~ 194 (331)
T PRK15079 115 MTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDV 194 (331)
T ss_pred CCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCH
Confidence 99999998765443 345556667788999999995 578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 464 GARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 464 ~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
.++.+++++|+++.++ |.|+|++|||++++..+||||++|++|+++..|+++++...
T Consensus 195 ~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~~i~~~ 252 (331)
T PRK15079 195 SIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHN 252 (331)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 9999999999999765 99999999999999999999999999999999999998654
No 390
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=99.97 E-value=1.4e-30 Score=262.96 Aligned_cols=200 Identities=24% Similarity=0.291 Sum_probs=162.6
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-----cccccccccCCCCc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-----APQKSYIGYCPQFD 381 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-----~~~~~~ig~v~Q~~ 381 (601)
++.++ +++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.++|+||++
T Consensus 13 ~~~il---~~~s~~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 86 (240)
T PRK09493 13 PTQVL---HNIDLNIDQGEVVVIIGPSG---SGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQF 86 (240)
T ss_pred CeEEe---eeeeEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceEEEeccc
Confidence 44554 88999888999999997522 44444332 233444444433321 12356799999999
Q ss_pred ccCCCCCHHHHHHHhHH-hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 382 ALNDRLTPREHLEFYSR-VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 382 ~l~~~lTv~E~L~~~~~-~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
.+++.+|++||+.+... .++....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|
T Consensus 87 ~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~ 166 (240)
T PRK09493 87 YLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSA 166 (240)
T ss_pred ccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 99999999999987532 23444444556788999999999888999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||+.++..++++|++++++|+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 167 LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 167 LDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 99999999999999998779999999999999999999999999999999999988753
No 391
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=99.97 E-value=1.2e-30 Score=259.92 Aligned_cols=196 Identities=39% Similarity=0.723 Sum_probs=161.9
Q ss_pred cEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC--cccccccccCCCCcccCC
Q psy7365 315 RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS--APQKSYIGYCPQFDALND 385 (601)
Q Consensus 315 ~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~--~~~~~~ig~v~Q~~~l~~ 385 (601)
++++ +++++...-++.+++++... .|++++++ +..|..++.+.+... ...++.+||+||++.+++
T Consensus 15 ~~il---~~is~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~ 88 (220)
T cd03263 15 KPAV---DDLSLNVYKGEIFGLLGHNG---AGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFD 88 (220)
T ss_pred ceee---cceEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEecCcCCccc
Confidence 4555 89999999999999997522 45554432 233443333333221 123567999999999998
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHH
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGA 465 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~ 465 (601)
.+|++||+.+....++.+.....+++.++++.++|.+..++++.+||+|||||++||+||+.+|++|||||||+|||+.+
T Consensus 89 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~ 168 (220)
T cd03263 89 ELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPAS 168 (220)
T ss_pred cCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHH
Confidence 99999999987766665554555678899999999988899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 466 RRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 466 ~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
++.+++.|+++++ ++|||++||+++++..+||++++|++|+++..|+++++
T Consensus 169 ~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 169 RRAIWDLILEVRK-GRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999865 59999999999999999999999999999999998875
No 392
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.1e-30 Score=269.37 Aligned_cols=194 Identities=20% Similarity=0.260 Sum_probs=159.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc---ccccccccCCCCcc-cCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA---PQKSYIGYCPQFDA-LNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~---~~~~~ig~v~Q~~~-l~~~lTv~ 390 (601)
+++++...-++.+++++... +|+++++ ++..|+.++.+.+.... ..++.+||+||++. .++..|+.
T Consensus 22 ~~isl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 98 (274)
T PRK13647 22 KGLSLSIPEGSKTALLGPNG---AGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVW 98 (274)
T ss_pred eeEEEEEcCCCEEEEECCCC---CcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHH
Confidence 88888888999999997522 4555443 23334444444443221 23467999999973 45568999
Q ss_pred HHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHH
Q psy7365 391 EHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLW 470 (601)
Q Consensus 391 E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~ 470 (601)
||+.|.....+......++++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.++..++
T Consensus 99 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~ 178 (274)
T PRK13647 99 DDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLM 178 (274)
T ss_pred HHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHH
Confidence 99987655445555555667899999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 471 TCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 471 ~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
++|++++++|+|||++|||++++.++|||+++|++|++++.|+++++.
T Consensus 179 ~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 179 EILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 999999877999999999999999999999999999999999997653
No 393
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1e-30 Score=271.51 Aligned_cols=194 Identities=23% Similarity=0.330 Sum_probs=161.8
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------cccccccccCCCCc--ccCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------APQKSYIGYCPQFD--ALND 385 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------~~~~~~ig~v~Q~~--~l~~ 385 (601)
+++++...-++++++++... .|++++++ +..|..++.+.+... ...++.+||+||++ .++.
T Consensus 23 ~~vsl~i~~Ge~v~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~ 99 (288)
T PRK13643 23 FDIDLEVKKGSYTALIGHTG---SGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFE 99 (288)
T ss_pred eeeEEEEcCCCEEEEECCCC---ChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHHHHhhEEEEecCcchhccc
Confidence 88999999999999998522 45555432 334444444444321 12356799999987 4554
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
.|+.||+.|....++.+..+.++++.++++.++|. +..++++.+||||||||++||+||+.+|++|||||||+|||+.
T Consensus 100 -~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~ 178 (288)
T PRK13643 100 -ETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPK 178 (288)
T ss_pred -chHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHH
Confidence 69999999876656666666677889999999996 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++.++++|++++++|+|||++|||++++..+||||++|++|++++.|+++++..
T Consensus 179 ~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 179 ARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 9999999999998779999999999999999999999999999999999999854
No 394
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=99.97 E-value=2.1e-30 Score=263.16 Aligned_cols=195 Identities=23% Similarity=0.274 Sum_probs=159.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-----------cccccccccCCCCccc
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-----------APQKSYIGYCPQFDAL 383 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-----------~~~~~~ig~v~Q~~~l 383 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+... ...++.++|+||++.+
T Consensus 20 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 96 (250)
T PRK11264 20 HGIDLEVKPGEVVAIIGPSG---SGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNL 96 (250)
T ss_pred ccceEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHHhhhhEEEEecCccc
Confidence 89999999999999997522 45554432 222333333332211 1234679999999999
Q ss_pred CCCCCHHHHHHHhHH-hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCC
Q psy7365 384 NDRLTPREHLEFYSR-VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMD 462 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~-~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD 462 (601)
++.+|+.||+.+... ..+.......+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||
T Consensus 97 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD 176 (250)
T PRK11264 97 FPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALD 176 (250)
T ss_pred CCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCC
Confidence 999999999987533 2333444455678899999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 463 PGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 463 ~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+.+++.++++|+++.++|+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 177 ~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 177 PELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999998779999999999999999999999999999999999988754
No 395
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.3e-30 Score=257.79 Aligned_cols=187 Identities=23% Similarity=0.429 Sum_probs=155.5
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcccCCCCCHHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDALNDRLTPREHLE 394 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~~~lTv~E~L~ 394 (601)
+++++...-++.+++++... +|++++++ +..|+.++.+.+... ..++.++|+||++.+++.+|++||+.
T Consensus 17 ~~v~~~i~~G~~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e~l~ 92 (210)
T cd03269 17 DDISFSVEKGEIFGLLGPNG---AGKTTTIRMILGIILPDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVIDQLV 92 (210)
T ss_pred eeeEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHHHHH
Confidence 88888888999999997522 45555433 223333333333221 23567999999999999999999998
Q ss_pred HhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q psy7365 395 FYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIE 474 (601)
Q Consensus 395 ~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~ 474 (601)
+....++.+.....+.+.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.+++.|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~ 172 (210)
T cd03269 93 YLAQLKGLKKEEARRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIR 172 (210)
T ss_pred HHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHH
Confidence 87666565545556678899999999988899999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 475 RAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 475 ~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
++.++|+|||++||+++++..+|||+++|++|+++..|
T Consensus 173 ~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 173 ELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 98877899999999999999999999999999998654
No 396
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=99.97 E-value=8.9e-31 Score=267.47 Aligned_cols=197 Identities=21% Similarity=0.273 Sum_probs=155.8
Q ss_pred cccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEE-----------Ec
Q psy7365 53 ESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAK-----------IY 115 (601)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~-----------~~ 115 (601)
.+|++.|++. ..+++|+|+ +.+ +||||| ||||| .++|+|+++|++|+|. ++
T Consensus 4 ~~~~~~y~~~---~~~l~~i~~-i~~Ge~~~IvG~nGs--GKSTL------lk~l~Gl~~p~~G~I~~~~~~~~~~~~~~ 71 (255)
T cd03236 4 DEPVHRYGPN---SFKLHRLPV-PREGQVLGLVGPNGI--GKSTA------LKILAGKLKPNLGKFDDPPDWDEILDEFR 71 (255)
T ss_pred cCcceeecCc---chhhhcCCC-CCCCCEEEEECCCCC--CHHHH------HHHHhCCcCCCCceEeeccccchhhhhcc
Confidence 4688887532 258999995 655 999999 56665 5799999999999996 77
Q ss_pred cccCCCchHHhc---ccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHH
Q psy7365 116 DHDIRTDMTTIR---RSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQ 192 (601)
Q Consensus 116 g~~~~~~~~~~~---~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~ 192 (601)
|.++.......+ ..++++||++.+++ .++.+++.+.. .......++.++++.+|+.+..++.+.+||||||
T Consensus 72 g~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~i~~~l-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~ 145 (255)
T cd03236 72 GSELQNYFTKLLEGDVKVIVKPQYVDLIP-KAVKGKVGELL-----KKKDERGKLDELVDQLELRHVLDRNIDQLSGGEL 145 (255)
T ss_pred CchhhhhhHHhhhcccceeeecchhccCc-hHHHHHHHHHh-----chhHHHHHHHHHHHHcCCchhhcCChhhCCHHHH
Confidence 887743222222 24899999998887 48888887642 2233456788999999999989999999999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++|+++ +.+
T Consensus 146 qrv~laral--------------------------------------~~~------------------------------ 157 (255)
T cd03236 146 QRVAIAAAL--------------------------------------ARD------------------------------ 157 (255)
T ss_pred HHHHHHHHH--------------------------------------HhC------------------------------
Confidence 999854432 222
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|+++||||||++||+.++..++++|+++. .+|+|||++||+++++..+||++++|. |++...|
T Consensus 158 -----p~illlDEPts~LD~~~~~~l~~~l~~l~-----~~~~tIIiiSHd~~~~~~~ad~i~~l~-~~~~~~~ 220 (255)
T cd03236 158 -----ADFYFFDEPSSYLDIKQRLNAARLIRELA-----EDDNYVLVVEHDLAVLDYLSDYIHCLY-GEPGAYG 220 (255)
T ss_pred -----CCEEEEECCCCCCCHHHHHHHHHHHHHHH-----hcCCEEEEEECCHHHHHHhCCEEEEEC-CCCCcce
Confidence 58999999999999999999999999873 348999999999999999999999994 5665544
No 397
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional
Probab=99.97 E-value=8.9e-31 Score=260.50 Aligned_cols=179 Identities=16% Similarity=0.100 Sum_probs=144.6
Q ss_pred eeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEE-EccccCCCchHHhcccEEEEccCCCCC
Q psy7365 68 GISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAK-IYDHDIRTDMTTIRRSLGVCPQYNALF 140 (601)
Q Consensus 68 ~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~-~~g~~~~~~~~~~~~~ig~v~Q~~~~~ 140 (601)
+++|+||++.+ +||||| ||||| .++|+|+++|++|+|. ++|..+ .+.|.+.+|
T Consensus 2 vl~~vs~~i~~Ge~~~l~G~NGs--GKSTL------lk~i~Gl~~~~sG~i~~~~~~~~------------~~~~~~~l~ 61 (213)
T PRK15177 2 VLDKTDFVMGYHEHIGILAAPGS--GKTTL------TRLLCGLDAPDEGDFIGLRGDAL------------PLGANSFIL 61 (213)
T ss_pred eeeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCccCCCCCEEEecCcee------------ccccccccC
Confidence 68999999988 999999 56655 5799999999999997 776532 123567789
Q ss_pred CCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhh
Q psy7365 141 DKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNV 220 (601)
Q Consensus 141 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~ 220 (601)
+.+|+.||+.++...++.+..+.. ..+.+.++++...++++++||||||||+++|++
T Consensus 62 ~~ltv~enl~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~lS~G~~qrv~la~a-------------------- 118 (213)
T PRK15177 62 PGLTGEENARMMASLYGLDGDEFS---HFCYQLTQLEQCYTDRVSEYSVTMKTHLAFAIN-------------------- 118 (213)
T ss_pred CcCcHHHHHHHHHHHcCCCHHHHH---HHHHHHhChhHHhhchHhhcCHHHHHHHHHHHH--------------------
Confidence 999999999998777666544332 234466788888899999999999999975433
Q ss_pred hHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHH
Q psy7365 221 ILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWE 300 (601)
Q Consensus 221 ~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~ 300 (601)
++++ |+++||||||+++|+.++..+++
T Consensus 119 ------------------l~~~-----------------------------------p~llllDEP~~~lD~~~~~~~~~ 145 (213)
T PRK15177 119 ------------------LLLP-----------------------------------CRLYIADGKLYTGDNATQLRMQA 145 (213)
T ss_pred ------------------HhcC-----------------------------------CCEEEECCCCccCCHHHHHHHHH
Confidence 2233 58999999999999999999999
Q ss_pred HHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 301 LLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 301 ~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
.+.+.. +++|+|++||+++++..+||++++|.+|+++..+..
T Consensus 146 ~l~~~~------~~~~ii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 187 (213)
T PRK15177 146 ALACQL------QQKGLIVLTHNPRLIKEHCHAFGVLLHGKITMCEDL 187 (213)
T ss_pred HHHHHh------hCCcEEEEECCHHHHHHhcCeeEEEECCeEEEeCCH
Confidence 876531 246899999999999999999999999999877653
No 398
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=99.97 E-value=6.9e-31 Score=294.18 Aligned_cols=191 Identities=27% Similarity=0.384 Sum_probs=153.3
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||++.|+. ...++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++.. +
T Consensus 321 i~~~~v~f~y~~--~~~~il~~i~l~i~~G~~~~ivG~sGs--GKSTL------~~ll~g~~~~~~G~I~~~g~~i~~~~ 390 (529)
T TIGR02857 321 LEFSGLSVAYPG--RRAPALRPVSFTVPPGERVALVGPSGA--GKSTL------LNLLLGFVDPTEGSIAVNGVPLADAD 390 (529)
T ss_pred EEEEEEEEECCC--CCcccccceeEEECCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCcEEEECCEehhhCC
Confidence 459999999743 335799999999998 999999 56665 579999999999999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcc-----------cCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHK-----------RTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~ 191 (601)
...+|+.+|||||+|.+|+ .|++||+.++... .+. +++.++++..|+.+. ......+|||||
T Consensus 391 ~~~lr~~i~~v~Q~~~lf~-~ti~~Ni~~~~~~--~~~----~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq 463 (529)
T TIGR02857 391 ADSWRDQIAWVPQHPFLFA-GTIAENIRLARPD--ASD----AEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQ 463 (529)
T ss_pred HHHHHhheEEEcCCCcccC-cCHHHHHhccCCC--CCH----HHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHH
Confidence 5667889999999999985 5999999875321 222 345566666665432 334557899999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+++.+
T Consensus 464 ~qri~laRal~~~------------------------------------------------------------------- 476 (529)
T TIGR02857 464 AQRLALARAFLRD------------------------------------------------------------------- 476 (529)
T ss_pred HHHHHHHHHHhcC-------------------------------------------------------------------
Confidence 9999866554333
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEe
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAII 337 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL 337 (601)
|+++|||||||+||+.+.+.+.+.+.++ ..++|+|++||+++.. ..||++++|
T Consensus 477 ------~~ililDE~ts~lD~~~~~~i~~~l~~~------~~~~t~i~itH~~~~~-~~~d~i~~l 529 (529)
T TIGR02857 477 ------APLLLLDEPTAHLDAETEALVTEALRAL------AQGRTVLLVTHRLALA-ERADRIVVL 529 (529)
T ss_pred ------CCEEEEeCcccccCHHHHHHHHHHHHHh------cCCCEEEEEecCHHHH-HhCCEEEeC
Confidence 5899999999999999999999999886 2589999999999887 579999875
No 399
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=99.97 E-value=1.7e-30 Score=258.83 Aligned_cols=192 Identities=22% Similarity=0.331 Sum_probs=156.6
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc----cccccccCCCCcccCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP----QKSYIGYCPQFDALNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~----~~~~ig~v~Q~~~l~~~lTv~ 390 (601)
+++++...-++.+++++... +|++++++ +..|..++.+.+..... .++.++|+||++.+++.+|++
T Consensus 17 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 93 (222)
T cd03224 17 FGVSLTVPEGEIVALLGRNG---AGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVE 93 (222)
T ss_pred eeeeEEEcCCeEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHH
Confidence 88999889999999997522 45555433 22333333333332111 245699999999999999999
Q ss_pred HHHHHhHHhcCCChhHHHHHHHHHHHHc-CCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHH
Q psy7365 391 EHLEFYSRVRNLPSVLLNTIVNESLNKF-ALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFL 469 (601)
Q Consensus 391 E~L~~~~~~~g~~~~~~~~~~~~lLe~~-~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i 469 (601)
||+.+....++ .....+++.++++.+ ++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.++..+
T Consensus 94 ~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l 171 (222)
T cd03224 94 ENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEI 171 (222)
T ss_pred HHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHH
Confidence 99988655443 223345677888888 577888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 470 WTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 470 ~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
+++|++++++|+|||++||+++++..+||++++|++|+++..|+++++.
T Consensus 172 ~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 172 FEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999777899999999999999999999999999999999988764
No 400
>COG1101 PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=99.97 E-value=4.9e-31 Score=255.30 Aligned_cols=210 Identities=22% Similarity=0.303 Sum_probs=168.6
Q ss_pred hhcccccccccCC-CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 51 LFESLSENRDKLG-IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 51 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
.+.++.+.|.+.. ..+++++++||++.. +|-||+ ||||| .+.|+|-++|++|+|.|+|.+++. +
T Consensus 3 ~~~~~~~~f~~g~~~ek~~l~~~sL~I~~g~FvtViGsNGA--GKSTl------ln~iaG~l~~t~G~I~Idg~dVtk~~ 74 (263)
T COG1101 3 SLSNATKTFFKGTPLEKRALNGLSLEIAEGDFVTVIGSNGA--GKSTL------LNAIAGDLKPTSGQILIDGVDVTKKS 74 (263)
T ss_pred ccccceeeecCCChhHHHHHhcCceeecCCceEEEEcCCCc--cHHHH------HHHhhCccccCCceEEECceecccCC
Confidence 3667888886544 468899999999977 999999 57665 579999999999999999999976 4
Q ss_pred hHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhh---cCCChH---HHHHHHHHHHHHc--CCCcccCCccccCChHHH
Q psy7365 123 MTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQL---KQVPKD---LAQLEISNMIGDL--GIPHKRTSLANTLSGGMQ 192 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~---~~~~~~---~~~~~~~~~l~~~--gl~~~~~~~~~~LSgG~~ 192 (601)
.+.....++.|||+| ..++.+|++||++..... +|+... ..+....+.++.+ |++...+.++.-||||||
T Consensus 75 ~~~RA~~larVfQdp~~gt~~~lTieENl~la~~Rg~~rgl~~~ln~~~~~~f~~~l~~l~lgLenrL~~~iglLSGGQR 154 (263)
T COG1101 75 VAKRANLLARVFQDPLAGTAPELTIEENLALAESRGKKRGLSSALNERRRSSFRERLARLGLGLENRLSDRIGLLSGGQR 154 (263)
T ss_pred HHHHhhHHHHHhcchhhCCcccccHHHHHHHHHhcCcccccchhhhHHHHHHHHHHHhhcccchhhhhcChhhhccchHH
Confidence 455566899999999 489999999999886543 333331 2222334556655 567889999999999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
|.++++. +.
T Consensus 155 QalsL~M--------------------------------------At--------------------------------- 163 (263)
T COG1101 155 QALSLLM--------------------------------------AT--------------------------------- 163 (263)
T ss_pred HHHHHHH--------------------------------------Hh---------------------------------
Confidence 9976321 11
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
+.+|++|+|||.|++|||.+...+.++-.++.. +...|.+++||+|+.+.++++|.++|++|+|+.+
T Consensus 164 --l~~pkiLLLDEHTAALDPkta~~vm~lT~kiV~----~~klTtlMVTHnm~~Al~yG~RlImLh~G~IvlD 230 (263)
T COG1101 164 --LHPPKILLLDEHTAALDPKTAEFVMELTAKIVE----EHKLTTLMVTHNMEDALDYGNRLIMLHSGKIVLD 230 (263)
T ss_pred --cCCCcEEEecchhhcCCcchHHHHHHHHHHHHH----hcCCceEEEeccHHHHHhhCCeEEEEeCCeEEEE
Confidence 124799999999999999999999999888853 4578999999999999999999999999998764
No 401
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=5.6e-31 Score=265.11 Aligned_cols=180 Identities=21% Similarity=0.301 Sum_probs=152.1
Q ss_pred hhhhcccccccccCCC-----ccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccc
Q psy7365 49 VSLFESLSENRDKLGI-----DSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDH 117 (601)
Q Consensus 49 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~ 117 (601)
+..++||+|.|....+ ...|++||||++.+ +|.||| ||||+ + |+|.|+++|++|+|.++|+
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~--GKSTl-----g-r~i~~L~~pt~G~i~f~g~ 75 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGC--GKSTL-----G-RLILGLEEPTSGEILFEGK 75 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCC--CHHHH-----H-HHHHcCcCCCCceEEEcCc
Confidence 4558899999865332 35899999999988 999999 56655 4 5999999999999999999
Q ss_pred cCCCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-ccCCccccCChHHHhhhh
Q psy7365 118 DIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-KRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 118 ~~~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qr~~ 196 (601)
++.... +++..+++.++|+.+|+.. ..++++++|||||+||++
T Consensus 76 ~i~~~~------------------------------------~~~~~~~v~elL~~Vgl~~~~~~ryPhelSGGQrQRi~ 119 (268)
T COG4608 76 DITKLS------------------------------------KEERRERVLELLEKVGLPEEFLYRYPHELSGGQRQRIG 119 (268)
T ss_pred chhhcc------------------------------------hhHHHHHHHHHHHHhCCCHHHhhcCCcccCchhhhhHH
Confidence 864321 4556678999999999985 789999999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
|||||. -
T Consensus 120 IARALa--------------------------------------l----------------------------------- 126 (268)
T COG4608 120 IARALA--------------------------------------L----------------------------------- 126 (268)
T ss_pred HHHHHh--------------------------------------h-----------------------------------
Confidence 654322 2
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
.|+++|+|||+|+||...+.++.++|.+++ +..|.|.+++|||++.+..+|||+++|..|+++..+...
T Consensus 127 ~P~liV~DEpvSaLDvSiqaqIlnLL~dlq----~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~ 195 (268)
T COG4608 127 NPKLIVADEPVSALDVSVQAQILNLLKDLQ----EELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTE 195 (268)
T ss_pred CCcEEEecCchhhcchhHHHHHHHHHHHHH----HHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHH
Confidence 269999999999999999999999999995 346999999999999999999999999999999888653
No 402
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.97 E-value=6.6e-31 Score=247.81 Aligned_cols=195 Identities=21% Similarity=0.262 Sum_probs=161.9
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------ccccccccccccc--------C--------CcccccccccCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDM--------K--------SAPQKSYIGYCP 378 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~--------~--------~~~~~~~ig~v~ 378 (601)
.-++....-+|.|.+|+... +|++++++ +..+...+.+..+ . -...|.++|+||
T Consensus 23 KGvSL~A~~GdVisIIGsSG---SGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~L~mVF 99 (256)
T COG4598 23 KGVSLQANAGDVISIIGSSG---SGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTRLGMVF 99 (256)
T ss_pred cceeeecCCCCEEEEecCCC---CchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHHhhHhh
Confidence 34556667899999997522 45555443 1222221111110 0 012356799999
Q ss_pred CCcccCCCCCHHHHHHH-hHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECC
Q psy7365 379 QFDALNDRLTPREHLEF-YSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEP 457 (601)
Q Consensus 379 Q~~~l~~~lTv~E~L~~-~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEP 457 (601)
|+.++|.+|||.||+.- .....|.++.++.++++.+|.++|+.+..+.+|..||||||||++|||||+.+|+++++|||
T Consensus 100 Q~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~~LSGGQQQR~aIARaLameP~vmLFDEP 179 (256)
T COG4598 100 QHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYPAHLSGGQQQRVAIARALAMEPEVMLFDEP 179 (256)
T ss_pred hhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCccccCchHHHHHHHHHHHhcCCceEeecCC
Confidence 99999999999999754 34556888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 458 TSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 458 TsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||.|||+-.-++.+.+++|+++|+|.+++||.|.++..++.+|+++++|.|-..|+|+++..
T Consensus 180 TSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qvf~ 241 (256)
T COG4598 180 TSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQVFG 241 (256)
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999864
No 403
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=99.97 E-value=9.3e-31 Score=270.98 Aligned_cols=204 Identities=20% Similarity=0.293 Sum_probs=151.9
Q ss_pred CCeeeeecCCC---CCCccchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhc
Q psy7365 31 GSEVTYVLPQD---PASMGAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSML 101 (601)
Q Consensus 31 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l 101 (601)
|.-+.|+.+.+ +.+++...+.++++++. +.++++|+||++.+ +||||+ ||||| .++|
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~l~i~nls~~------~~~vL~~vs~~i~~Ge~~~liG~NGs--GKSTL------l~~I 83 (282)
T cd03291 18 GELLEKAKQENNDRKHSSDDNNLFFSNLCLV------GAPVLKNINLKIEKGEMLAITGSTGS--GKTSL------LMLI 83 (282)
T ss_pred HHHHhcccccccccccCCCCCeEEEEEEEEe------cccceeeeeEEEcCCCEEEEECCCCC--CHHHH------HHHH
Confidence 33344444443 24555666679999984 24599999999988 999999 56655 5799
Q ss_pred cCCCCCCeeEEEEccccCCCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc---
Q psy7365 102 MGMLPVSSGTAKIYDHDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH--- 178 (601)
Q Consensus 102 ~Gl~~~~~G~v~~~g~~~~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~--- 178 (601)
+|+++|++|+|.++| .++|+||++.+|+. ||.||+.++... .. .++.++++.+++.+
T Consensus 84 ~Gl~~p~~G~I~i~g------------~i~yv~q~~~l~~~-tv~enl~~~~~~---~~----~~~~~~l~~~~l~~~l~ 143 (282)
T cd03291 84 LGELEPSEGKIKHSG------------RISFSSQFSWIMPG-TIKENIIFGVSY---DE----YRYKSVVKACQLEEDIT 143 (282)
T ss_pred hCCCCCCCcEEEECC------------EEEEEeCccccccc-CHHHHhhccccc---CH----HHHHHHHHHhCCHHHHH
Confidence 999999999999987 38999999988875 999999875321 11 11223333344322
Q ss_pred --------ccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHH
Q psy7365 179 --------KRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQ 250 (601)
Q Consensus 179 --------~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~ 250 (601)
..++.+.+||||||||+++||+|+ .
T Consensus 144 ~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~--------------------------------------~--------- 176 (282)
T cd03291 144 KFPEKDNTVLGEGGITLSGGQRARISLARAVY--------------------------------------K--------- 176 (282)
T ss_pred hccccccceecCCCCcCCHHHHHHHHHHHHHh--------------------------------------c---------
Confidence 234457899999999997544322 2
Q ss_pred HHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHH-HHHhhhccccCCcEEEEEecchhHHHh
Q psy7365 251 MALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELL-IKVYYASHSLSGRTVILTTHYMDEADL 329 (601)
Q Consensus 251 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l-~~l~~~~~~~~G~TVI~~tHdl~~~~~ 329 (601)
+|+++||||||+|||+.++..+.+.+ .++ + ++.|||++||+++++ .
T Consensus 177 --------------------------~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~-----~-~~~tIiiisH~~~~~-~ 223 (282)
T cd03291 177 --------------------------DADLYLLDSPFGYLDVFTEKEIFESCVCKL-----M-ANKTRILVTSKMEHL-K 223 (282)
T ss_pred --------------------------CCCEEEEECCCccCCHHHHHHHHHHHHHHh-----h-CCCEEEEEeCChHHH-H
Confidence 25899999999999999999998865 444 1 378999999999997 4
Q ss_pred cCCEEEEecCCccccccCc
Q psy7365 330 LGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 330 l~Drv~vL~~GkIv~~G~~ 348 (601)
.||++++|.+|+++..+..
T Consensus 224 ~~d~i~~l~~G~i~~~g~~ 242 (282)
T cd03291 224 KADKILILHEGSSYFYGTF 242 (282)
T ss_pred hCCEEEEEECCEEEEECCH
Confidence 7999999999998876643
No 404
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=99.97 E-value=1.2e-30 Score=295.08 Aligned_cols=203 Identities=25% Similarity=0.375 Sum_probs=160.7
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++|+++.|.. ....++++|+||++.+ .||||+ ||||| .++|+|+++|++|+|+++|.++.. +
T Consensus 338 i~~~~v~f~y~~-~~~~~iL~~inl~i~~Ge~i~IvG~sGs--GKSTL------lklL~gl~~p~~G~I~i~g~~i~~~~ 408 (576)
T TIGR02204 338 IEFEQVNFAYPA-RPDQPALDGLNLTVRPGETVALVGPSGA--GKSTL------FQLLLRFYDPQSGRILLDGVDLRQLD 408 (576)
T ss_pred EEEEEEEEECCC-CCCCccccceeEEecCCCEEEEECCCCC--CHHHH------HHHHHhccCCCCCEEEECCEEHHhcC
Confidence 459999999753 1125799999999988 999999 56665 579999999999999999999864 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-----------cccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-----------HKRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgG~ 191 (601)
....++.+||+||+|.+| +.|++||+.++... .+. +++.++++.+|+. .........|||||
T Consensus 409 ~~~~~~~i~~~~Q~~~lf-~~Ti~~Ni~~~~~~--~~~----~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq 481 (576)
T TIGR02204 409 PAELRARMALVPQDPVLF-AASVMENIRYGRPD--ATD----EEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQ 481 (576)
T ss_pred HHHHHHhceEEccCCccc-cccHHHHHhcCCCC--CCH----HHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHH
Confidence 556788899999999988 56999999875321 222 2344455555543 33334556799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++||+|+.+
T Consensus 482 ~Qrl~laRal~~~------------------------------------------------------------------- 494 (576)
T TIGR02204 482 RQRIAIARAILKD------------------------------------------------------------------- 494 (576)
T ss_pred HHHHHHHHHHHhC-------------------------------------------------------------------
Confidence 9999876654433
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++|||||||+||+.+.+.+++.|+++ ..++|+|++||+.+.. ..||+++++++|+++..|+.
T Consensus 495 ------~~ililDEpts~lD~~~~~~i~~~l~~~------~~~~t~IiitH~~~~~-~~~d~vi~l~~g~~~~~g~~ 558 (576)
T TIGR02204 495 ------APILLLDEATSALDAESEQLVQQALETL------MKGRTTLIIAHRLATV-LKADRIVVMDQGRIVAQGTH 558 (576)
T ss_pred ------CCeEEEeCcccccCHHHHHHHHHHHHHH------hCCCEEEEEecchHHH-HhCCEEEEEECCEEEeeecH
Confidence 4899999999999999999999999886 2479999999999776 57999999999999887754
No 405
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=99.97 E-value=1.4e-30 Score=297.79 Aligned_cols=195 Identities=25% Similarity=0.281 Sum_probs=159.4
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccC
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDI 119 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~ 119 (601)
+..+..++||++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.+ |.++
T Consensus 316 ~~~~l~~~~l~~~~~~----~~il~~vsl~i~~Ge~~~l~G~NGs--GKSTL------lk~l~G~~~p~~G~i~~-~~~~ 382 (635)
T PRK11147 316 GKIVFEMENVNYQIDG----KQLVKDFSAQVQRGDKIALIGPNGC--GKTTL------LKLMLGQLQADSGRIHC-GTKL 382 (635)
T ss_pred CCceEEEeeeEEEECC----eEEEcCcEEEEcCCCEEEEECCCCC--cHHHH------HHHHhCCCCCCCcEEEE-CCCc
Confidence 5566779999999864 3599999999988 999999 56665 67999999999999998 5432
Q ss_pred CCchHHhcccEEEEccCC-CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhhhc
Q psy7365 120 RTDMTTIRRSLGVCPQYN-ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKLDN 197 (601)
Q Consensus 120 ~~~~~~~~~~ig~v~Q~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~~~ 197 (601)
.+||++|++ .+++.+||.||+.++....... ....++.++++.|++. +..++++++|||||||||++
T Consensus 383 ---------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~l 451 (635)
T PRK11147 383 ---------EVAYFDQHRAELDPEKTVMDNLAEGKQEVMVN--GRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLL 451 (635)
T ss_pred ---------EEEEEeCcccccCCCCCHHHHHHhhccccccc--chHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHH
Confidence 599999986 5889999999998754221111 1234678899999996 56899999999999999975
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
||++ +. +
T Consensus 452 a~al--------------------------------------~~-----------------------------------~ 458 (635)
T PRK11147 452 ARLF--------------------------------------LK-----------------------------------P 458 (635)
T ss_pred HHHH--------------------------------------hc-----------------------------------C
Confidence 4432 22 2
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEec-CCccccc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIA-AGKLQCC 345 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~-~GkIv~~ 345 (601)
|++|||||||+|||+.++..+.+.|+++ +.|||++|||.+++..+||+++++. +|++...
T Consensus 459 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--------~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~ 519 (635)
T PRK11147 459 SNLLILDEPTNDLDVETLELLEELLDSY--------QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRY 519 (635)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHhC--------CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEc
Confidence 5899999999999999999999999763 3499999999999999999999997 7987654
No 406
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2e-30 Score=269.15 Aligned_cols=195 Identities=19% Similarity=0.244 Sum_probs=159.8
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------cccccccccCCCCcc-cCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------APQKSYIGYCPQFDA-LNDR 386 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------~~~~~~ig~v~Q~~~-l~~~ 386 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.++.. ...++.+||+||++. .+..
T Consensus 24 ~~vsl~i~~Ge~~~iiG~NG---aGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 100 (287)
T PRK13641 24 DNISFELEEGSFVALVGHTG---SGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFE 100 (287)
T ss_pred eeeEEEEeCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhceEEEEeChhhhhcc
Confidence 88888889999999997522 45555433 333444444444321 123457999999973 2335
Q ss_pred CCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHH
Q psy7365 387 LTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGA 465 (601)
Q Consensus 387 lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~ 465 (601)
+|+.||+.+....++...++..+++.++++.++|. +..++++.+||||||||++||+||+.+|++|||||||+|||+.+
T Consensus 101 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~ 180 (287)
T PRK13641 101 NTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEG 180 (287)
T ss_pred chHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHH
Confidence 89999998765545555555666789999999997 68899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 466 RRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 466 ~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++.++++|++++++|.|||++|||++++..+|||+++|++|+++..|+++++..
T Consensus 181 ~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 181 RKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999997779999999999999999999999999999999999998754
No 407
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.9e-30 Score=269.23 Aligned_cols=194 Identities=22% Similarity=0.319 Sum_probs=160.5
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------cccccccccCCCCc--ccCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------APQKSYIGYCPQFD--ALND 385 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------~~~~~~ig~v~Q~~--~l~~ 385 (601)
|++++-..-++.+++++... +|++++++ +..|+.++.+.++.. ...+++|||+||++ .+++
T Consensus 24 ~~vsl~i~~Ge~~~i~G~nG---sGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~ 100 (286)
T PRK13646 24 HDVNTEFEQGKYYAIVGQTG---SGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE 100 (286)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhheEEEecChHhccch
Confidence 88999999999999997532 45555432 333444444444321 12356899999986 3444
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
.|+.||+.|.....+.+..+..+++.++++.+||. +..++++.+||||||||++||+||+.+|++|||||||+|||+.
T Consensus 101 -~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~ 179 (286)
T PRK13646 101 -DTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQ 179 (286)
T ss_pred -hhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHH
Confidence 59999998866555666666667889999999997 6788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++..++++|+++++ .|+|||++||+++++..+|||+++|++|++++.|+++++.+
T Consensus 180 ~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 180 SKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999976 49999999999999999999999999999999999998754
No 408
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=99.97 E-value=1.4e-30 Score=258.90 Aligned_cols=183 Identities=21% Similarity=0.296 Sum_probs=150.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc-------cccccccCCCCcccCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP-------QKSYIGYCPQFDALNDRL 387 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~-------~~~~ig~v~Q~~~l~~~l 387 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+..... .++.++|+||++.+++.+
T Consensus 21 ~~~s~~i~~G~~~~l~G~nG---sGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 97 (218)
T cd03255 21 KGVSLSIEKGEFVAIVGPSG---SGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDL 97 (218)
T ss_pred eeeEEEEcCCCEEEEEcCCC---CCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCC
Confidence 89999999999999998522 45555433 23343333343332211 235799999999999999
Q ss_pred CHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 388 TPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 388 Tv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
|++||+.+....++.......+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++
T Consensus 98 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~ 177 (218)
T cd03255 98 TALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGK 177 (218)
T ss_pred cHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHH
Confidence 99999998765555444444567889999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEE
Q psy7365 468 FLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQF 508 (601)
Q Consensus 468 ~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~i 508 (601)
.++++|+++++ +|+|||++||++++++ +||++++|++|++
T Consensus 178 ~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 178 EVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999977 5899999999999998 9999999999974
No 409
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.8e-30 Score=260.89 Aligned_cols=200 Identities=26% Similarity=0.387 Sum_probs=162.4
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc----ccccccccCCCCc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA----PQKSYIGYCPQFD 381 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~----~~~~~ig~v~Q~~ 381 (601)
.++.++ +++++...-++.+++++... .|++++++ +..|+.++.+.+.... ..++.++|+||++
T Consensus 14 ~~~~~l---~~~sl~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~ 87 (241)
T PRK10895 14 KGRRVV---EDVSLTVNSGEIVGLLGPNG---AGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGYLPQEA 87 (241)
T ss_pred CCEEEE---eeeeEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEEeccCC
Confidence 344444 89999999999999997522 45555433 2333333333333211 1246799999999
Q ss_pred ccCCCCCHHHHHHHhHHhc-CCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 382 ALNDRLTPREHLEFYSRVR-NLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 382 ~l~~~lTv~E~L~~~~~~~-g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
.+++.+|+.||+.+..... +....+.+.++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|
T Consensus 88 ~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~ 167 (241)
T PRK10895 88 SIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAG 167 (241)
T ss_pred cccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999999999998764433 233334456788999999999888999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
||+.+++.+++++++++++|+|||++||+++++..+||++++|++|++++.|+++++.
T Consensus 168 LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 168 VDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 9999999999999998877999999999999999999999999999999999998874
No 410
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=99.97 E-value=3.3e-30 Score=265.06 Aligned_cols=195 Identities=22% Similarity=0.272 Sum_probs=159.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+.... ..++.++|+||++.+++.+|
T Consensus 24 ~~vsl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 100 (269)
T PRK11831 24 DNISLTVPRGKITAIMGPSG---IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMN 100 (269)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCC
Confidence 88899999999999997522 45555433 2233333333332211 12457999999999999999
Q ss_pred HHHHHHHhHHhc-CCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 389 PREHLEFYSRVR-NLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 389 v~E~L~~~~~~~-g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
+.||+.+....+ +.+......++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++
T Consensus 101 v~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~ 180 (269)
T PRK11831 101 VFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMG 180 (269)
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHH
Confidence 999998754332 2333344556788999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 468 FLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 468 ~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
.++++|++++++ |+|||++|||++++..+|||+++|++|+++..|+++++.+
T Consensus 181 ~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 181 VLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 999999998765 8999999999999999999999999999999999988754
No 411
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=99.97 E-value=1.2e-30 Score=246.74 Aligned_cols=192 Identities=21% Similarity=0.313 Sum_probs=159.3
Q ss_pred hHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCC-cccccccccCCCCcccCCCCCHHHHHHHh
Q psy7365 325 DEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKS-APQKSYIGYCPQFDALNDRLTPREHLEFY 396 (601)
Q Consensus 325 ~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~~~lTv~E~L~~~ 396 (601)
+....-++++++++... .|+++++ .+..+..++.+.|... .+..+-++++||++++|.++||.+|+.+.
T Consensus 19 dl~v~~ge~vAi~GpSG---aGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLG 95 (231)
T COG3840 19 DLTVPAGEIVAILGPSG---AGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLG 95 (231)
T ss_pred EEeecCCcEEEEECCCC---ccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhccc
Confidence 44556788999997532 4555443 3444555556666543 34566799999999999999999999875
Q ss_pred HHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Q psy7365 397 SRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIERA 476 (601)
Q Consensus 397 ~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~~l 476 (601)
..-.-.-..+.+++++.++.++||..+.+|.|.+|||||||||++||+|+.+-+|++||||+|.|||.-|.++..++.++
T Consensus 96 l~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l 175 (231)
T COG3840 96 LSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQL 175 (231)
T ss_pred CCcccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHH
Confidence 43111112445678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 477 VSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 477 ~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
.++ +.|++|+||..+++.+++||++++++|+|.+.|+.+++..
T Consensus 176 ~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~ 219 (231)
T COG3840 176 CDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLS 219 (231)
T ss_pred HHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhc
Confidence 754 9999999999999999999999999999999999988764
No 412
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=99.97 E-value=1.7e-30 Score=260.11 Aligned_cols=196 Identities=21% Similarity=0.296 Sum_probs=155.9
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc------------ccccccccccccccCC-----cccccccc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL------------KNSFARGYYLSLDMKS-----APQKSYIG 375 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL------------k~~~g~g~~igld~~~-----~~~~~~ig 375 (601)
.+++++ +++++...-++.+++++... +|+++++ .+..|+.++.+.+... ...++.+|
T Consensus 11 ~~~~~l---~~vsl~i~~Ge~~~i~G~nG---sGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 84 (227)
T cd03260 11 GDKHAL---KDISLDIPKGEITALIGPSG---CGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELRRRVG 84 (227)
T ss_pred CCceee---eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHHhhEE
Confidence 344554 89999999999999997522 4444432 2222333333333221 12356799
Q ss_pred cCCCCcccCCCCCHHHHHHHhHHhcCCCh-hHHHHHHHHHHHHcCCCcccccc--cCcCChHHHHHHHHHHHHhCCCCEE
Q psy7365 376 YCPQFDALNDRLTPREHLEFYSRVRNLPS-VLLNTIVNESLNKFALGHYSDRE--VRTLSGGNKRKLSTAIALLGNTPLI 452 (601)
Q Consensus 376 ~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~-~~~~~~~~~lLe~~~L~~~~~~~--~~~LSgGqkQRl~lA~AL~~~P~lL 452 (601)
|+||++.++ .+|++||+.+....++... ....+++.++++.+++.+..+++ +.+||||||||++||+||+.+|++|
T Consensus 85 ~~~q~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~ll 163 (227)
T cd03260 85 MVFQKPNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARALANEPEVL 163 (227)
T ss_pred EEecCchhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999888 7999999988655544332 22456788999999998776776 5999999999999999999999999
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHH
Q psy7365 453 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATH 516 (601)
Q Consensus 453 lLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~ 516 (601)
||||||+|||+.+++.++++|++++++ +|||++|||++++..+|||+++|++|++++.|++++
T Consensus 164 llDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 164 LLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 999999999999999999999999877 999999999999999999999999999999998765
No 413
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=99.97 E-value=4.8e-30 Score=258.58 Aligned_cols=201 Identities=24% Similarity=0.390 Sum_probs=163.1
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc--ccccccccCCCCcccC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA--PQKSYIGYCPQFDALN 384 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~--~~~~~ig~v~Q~~~l~ 384 (601)
+++++ +++++...-++.+++++... .|++++++ +..|..++.+.+.... ..++.++|+||++.++
T Consensus 13 ~~~~l---~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~ 86 (236)
T TIGR03864 13 ARRAL---DDVSFTVRPGEFVALLGPNG---AGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVFQQPTLD 86 (236)
T ss_pred CEEEE---eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeCCCCCCc
Confidence 44544 88999999999999997522 45554432 2333333333332211 1235799999999888
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|++||+.+....++.+.....+.+.++++.++|.+..++++.+||||||||++||+||+.+|+++||||||+|||+.
T Consensus 87 ~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~ 166 (236)
T TIGR03864 87 LDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPA 166 (236)
T ss_pred ccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHH
Confidence 89999999988765555444445567889999999998889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHh
Q psy7365 465 ARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKY 521 (601)
Q Consensus 465 ~~~~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~ 521 (601)
+++.+++.|+++++ +|+|||++||+++++.. |||+++|++|+++..|+++++.+.+
T Consensus 167 ~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~~~~~ 223 (236)
T TIGR03864 167 SRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAELRGAL 223 (236)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHHHHHc
Confidence 99999999999875 58999999999999975 9999999999999999999887654
No 414
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=99.97 E-value=2.1e-30 Score=256.07 Aligned_cols=190 Identities=24% Similarity=0.361 Sum_probs=154.6
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~ 384 (601)
.++.++ +++++...-++.+++++... .|++++++ +..|+..+.+.+... ...++.++|+||++.++
T Consensus 11 ~~~~~l---~~~~~~i~~G~~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~ 84 (208)
T cd03268 11 GKKRVL---DDISLHVKKGEIYGFLGPNG---AGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEAPGFY 84 (208)
T ss_pred CCeEeE---eeeEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCCCccC
Confidence 344554 88898888999999997522 45554432 223333333333221 12356799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|+.||+.++...++.. .++++++++.+++.+..++++.+||||||||++||+|++.+|+++||||||+|||+.
T Consensus 85 ~~~tv~e~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~ 160 (208)
T cd03268 85 PNLTARENLRLLARLLGIR----KKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPD 160 (208)
T ss_pred ccCcHHHHHHHHHHhcCCc----HHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHH
Confidence 9999999998876544431 346788999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 465 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
+++.++++|++++++|+|||++|||++++..+||++++|++|++++.|
T Consensus 161 ~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 161 GIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999998878999999999999999999999999999998764
No 415
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=99.97 E-value=3.8e-30 Score=262.63 Aligned_cols=201 Identities=20% Similarity=0.249 Sum_probs=161.2
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC----------------cc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS----------------AP 369 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~----------------~~ 369 (601)
.+++++ +++++...-++.+++++... .|++++++ +..|..++.+.+... ..
T Consensus 16 ~~~~~l---~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~ 89 (257)
T PRK10619 16 GEHEVL---KGVSLQANAGDVISIIGSSG---SGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRL 89 (257)
T ss_pred CCEEEE---eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccccchHHHH
Confidence 345554 88899999999999997422 44444332 222333333322210 12
Q ss_pred cccccccCCCCcccCCCCCHHHHHHHhH-HhcCCChhHHHHHHHHHHHHcCCCcc-cccccCcCChHHHHHHHHHHHHhC
Q psy7365 370 QKSYIGYCPQFDALNDRLTPREHLEFYS-RVRNLPSVLLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALLG 447 (601)
Q Consensus 370 ~~~~ig~v~Q~~~l~~~lTv~E~L~~~~-~~~g~~~~~~~~~~~~lLe~~~L~~~-~~~~~~~LSgGqkQRl~lA~AL~~ 447 (601)
.+++++|+||++.+++.+|++||+.+.. .+++......++++.++++.+++.+. .++++.+||||||||++||+||+.
T Consensus 90 ~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qrv~laral~~ 169 (257)
T PRK10619 90 LRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAM 169 (257)
T ss_pred HhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHhc
Confidence 2467999999999999999999998643 23344444556678899999999876 488999999999999999999999
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 448 NTPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 448 ~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+|+++||||||+|||+.+++.++++|++++++|+|||++|||++++..+|||+++|++|+++..|+++++.+
T Consensus 170 ~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 241 (257)
T PRK10619 170 EPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQLFG 241 (257)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhhh
Confidence 999999999999999999999999999998779999999999999999999999999999999999988753
No 416
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.9e-30 Score=267.49 Aligned_cols=200 Identities=20% Similarity=0.295 Sum_probs=163.4
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCC-----cccccccccCCCCc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKS-----APQKSYIGYCPQFD 381 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~-----~~~~~~ig~v~Q~~ 381 (601)
++.++ +++++...-++.+++++... .|+++++ ++..|+.++.+.+... ...++.+||+||++
T Consensus 18 ~~~~l---~~vs~~i~~Ge~~~i~G~nG---aGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~ 91 (283)
T PRK13636 18 GTHAL---KGININIKKGEVTAILGGNG---AGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESVGMVFQDP 91 (283)
T ss_pred CCeee---eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhEEEEecCc
Confidence 35555 89999999999999997522 4444433 2333444444444321 12356799999997
Q ss_pred c-cCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 382 A-LNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 382 ~-l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
. .+...|++||+.+.....+.+..+..++++++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|
T Consensus 92 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~g 171 (283)
T PRK13636 92 DNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAG 171 (283)
T ss_pred chhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccC
Confidence 4 344579999998865545555555567789999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||+.++..++++|+++.++ |+|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 172 LD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 172 LDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999765 8999999999999999999999999999999999998754
No 417
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=99.97 E-value=2.7e-30 Score=261.11 Aligned_cols=193 Identities=22% Similarity=0.275 Sum_probs=156.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++...-++.+++++... +|++++++ +..|...+.+.+.... ..++.+||+||++.+++.+|
T Consensus 19 ~~vs~~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 95 (243)
T TIGR02315 19 KNINLNINPGEFVAIIGPSG---AGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLT 95 (243)
T ss_pred ecceEEEcCCCEEEEECCCC---CCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccccccc
Confidence 88999999999999998522 45555432 2333333333332211 13567999999999999999
Q ss_pred HHHHHHHhHH--------hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 389 PREHLEFYSR--------VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 389 v~E~L~~~~~--------~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
+.||+.+... +.+.......+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|
T Consensus 96 v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 175 (243)
T TIGR02315 96 VLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARALAQQPDLILADEPIAS 175 (243)
T ss_pred HHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 9999976321 11112233456788999999999888999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
||+.+++.++++|+++.++ |+|||++||+++++..+||++++|++|+++..|+++++
T Consensus 176 LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 176 LDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 9999999999999998764 89999999999999999999999999999999999876
No 418
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=99.97 E-value=3e-30 Score=255.85 Aligned_cols=183 Identities=22% Similarity=0.310 Sum_probs=151.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCcccCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~~l~~~lT 388 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.++... ..++.++|+||++.+++.+|
T Consensus 19 ~~is~~i~~G~~~~l~G~nG---sGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 95 (214)
T TIGR02673 19 HDVSLHIRKGEFLFLTGPSG---AGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRT 95 (214)
T ss_pred cceeEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCc
Confidence 88999999999999997522 45554432 2333333334333211 13467999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
+.||+.+....++.......+++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.++..
T Consensus 96 v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~ 175 (214)
T TIGR02673 96 VYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFPEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSER 175 (214)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHH
Confidence 99999887655554444455678899999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCE
Q psy7365 469 LWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 507 (601)
Q Consensus 469 i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~ 507 (601)
++++|++++++|+|||++||+++++..+|||+++|++|+
T Consensus 176 l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 176 ILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999987779999999999999999999999999985
No 419
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=2.9e-30 Score=267.00 Aligned_cols=194 Identities=24% Similarity=0.273 Sum_probs=161.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCcc-cCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFDA-LNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~-l~~~lTv~ 390 (601)
+++++...-++.+++++... +|++++++ +..|..++.+.+... ...++++||+||++. +++.+|+.
T Consensus 24 ~~vsl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 100 (279)
T PRK13650 24 NDVSFHVKQGEWLSIIGHNG---SGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVE 100 (279)
T ss_pred eeeEEEEeCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHH
Confidence 78888888999999997532 45554432 333444444444322 123567999999974 67788999
Q ss_pred HHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHH
Q psy7365 391 EHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLW 470 (601)
Q Consensus 391 E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~ 470 (601)
||+.|.....+.+..+..+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.++
T Consensus 101 eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~ 180 (279)
T PRK13650 101 DDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELI 180 (279)
T ss_pred HHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHH
Confidence 99988655556665566678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 471 TCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 471 ~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++|++++++ |+|||++||+++++. +|||+++|++|+++..|+++++..
T Consensus 181 ~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13650 181 KTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVESTSTPRELFS 229 (279)
T ss_pred HHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEECCHHHHHc
Confidence 999999865 999999999999995 799999999999999999998764
No 420
>PRK10908 cell division protein FtsE; Provisional
Probab=99.97 E-value=4.2e-30 Score=256.53 Aligned_cols=191 Identities=18% Similarity=0.213 Sum_probs=155.4
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQF 380 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~ 380 (601)
+++++ |++++...-++.+++++... .|++++++ +..|+.++.+.++... ..++.++|+||+
T Consensus 14 ~~~~l---~~vsl~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~ 87 (222)
T PRK10908 14 GRQAL---QGVTFHMRPGEMAFLTGHSG---AGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQD 87 (222)
T ss_pred CCeEE---eeeeEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhheEEEecC
Confidence 34554 89999999999999997522 45554432 2334433333333211 134679999999
Q ss_pred cccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 381 DALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 381 ~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
+.+++.+|+.||+.+....++....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|
T Consensus 88 ~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~ 167 (222)
T PRK10908 88 HHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGN 167 (222)
T ss_pred ccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCc
Confidence 98888999999998865555554444556788999999999888999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEE
Q psy7365 461 MDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTC 510 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~ 510 (601)
||+.+++.++++|++++++|.|||++||+++++..+|||+++|++|+++.
T Consensus 168 LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 168 LDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999997778999999999999999999999999999854
No 421
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=3.8e-30 Score=254.75 Aligned_cols=186 Identities=26% Similarity=0.449 Sum_probs=151.6
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC--cccccccccCCCCcccCCCCCHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS--APQKSYIGYCPQFDALNDRLTPREH 392 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~--~~~~~~ig~v~Q~~~l~~~lTv~E~ 392 (601)
+++++-..-+ ++++++... .|++++++ +..|+.++.+.+... ...++.++|+||++.+++.+|+.||
T Consensus 17 ~~vs~~i~~g-~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~ 92 (211)
T cd03264 17 DGVSLTLGPG-MYGLLGPNG---AGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREF 92 (211)
T ss_pred cceeEEEcCC-cEEEECCCC---CCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecCCCcccccCCHHHH
Confidence 8888877777 888887421 45554432 233443333333221 1235679999999999999999999
Q ss_pred HHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHH
Q psy7365 393 LEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTC 472 (601)
Q Consensus 393 L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~l 472 (601)
+.+....++.+..+..+.+.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.++++
T Consensus 93 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~ 172 (211)
T cd03264 93 LDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNL 172 (211)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH
Confidence 99876655554444556788999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 473 IERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 473 L~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
|+++++ +.|||++|||++++..+|||+++|++|+++..|
T Consensus 173 l~~~~~-~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 173 LSELGE-DRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHHhC-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999876 599999999999999999999999999998764
No 422
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=99.97 E-value=2.2e-30 Score=295.86 Aligned_cols=193 Identities=23% Similarity=0.302 Sum_probs=157.2
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccC
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDI 119 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~ 119 (601)
+..++.+++|++.|++ ..+++|+||++.+ +||||| ||||| .++|+|+++|++|+|.+++.
T Consensus 309 ~~~~l~~~~l~~~y~~----~~il~~isl~i~~Ge~~~l~G~NGs--GKSTL------lk~l~G~~~p~~G~i~~~~~-- 374 (638)
T PRK10636 309 PNPLLKMEKVSAGYGD----RIILDSIKLNLVPGSRIGLLGRNGA--GKSTL------IKLLAGELAPVSGEIGLAKG-- 374 (638)
T ss_pred CCceEEEEeeEEEeCC----eeeeccceEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCCeEEECCC--
Confidence 5567789999999864 4599999999988 999999 57665 67999999999999999641
Q ss_pred CCchHHhcccEEEEccCC--CCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-cccCCccccCChHHHhhhh
Q psy7365 120 RTDMTTIRRSLGVCPQYN--ALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-HKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 120 ~~~~~~~~~~ig~v~Q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~~qr~~ 196 (601)
..+||+||++ .+++..|+.+++... .......++.++|+.||+. +..++++.+|||||||||+
T Consensus 375 --------~~igy~~Q~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~ 440 (638)
T PRK10636 375 --------IKLGYFAQHQLEFLRADESPLQHLARL------APQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLV 440 (638)
T ss_pred --------EEEEEecCcchhhCCccchHHHHHHHh------CchhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHH
Confidence 2599999985 356677888876421 1222345688999999997 4689999999999999997
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+|++ ++.
T Consensus 441 La~~--------------------------------------l~~----------------------------------- 447 (638)
T PRK10636 441 LALI--------------------------------------VWQ----------------------------------- 447 (638)
T ss_pred HHHH--------------------------------------Hhc-----------------------------------
Confidence 5443 222
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccc-cccC
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQ-CCGS 347 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv-~~G~ 347 (601)
+|++|||||||+|||+.++..+.+.|.++ .| |||++|||++++..+||++++|.+|+++ ..|+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-------~g-tvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~ 511 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF-------EG-ALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGD 511 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-------CC-eEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCC
Confidence 25899999999999999999999999874 34 9999999999999999999999999986 4443
No 423
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.97 E-value=2.3e-30 Score=255.33 Aligned_cols=185 Identities=24% Similarity=0.322 Sum_probs=148.6
Q ss_pred cEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcc-cCCC
Q psy7365 315 RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDA-LNDR 386 (601)
Q Consensus 315 ~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~-l~~~ 386 (601)
++++ +++++...-++.+++++... .|++++++ +..|..++.+.+......++.+||+||++. .++.
T Consensus 13 ~~~l---~~v~~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 86 (205)
T cd03226 13 TEIL---DDLSLDLYAGEIIALTGKNG---AGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFT 86 (205)
T ss_pred Ccee---eeeeEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecChhhhhhh
Confidence 4555 88888888999999997522 45555433 233333333333322234567999999974 3446
Q ss_pred CCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHH
Q psy7365 387 LTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGAR 466 (601)
Q Consensus 387 lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~ 466 (601)
+|++||+.++....+. ..+++.++++.++|.+..++++.+||||||||++||+||+.+|+++||||||+|||+.++
T Consensus 87 ~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~ 162 (205)
T cd03226 87 DSVREELLLGLKELDA----GNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNM 162 (205)
T ss_pred ccHHHHHhhhhhhcCc----cHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHH
Confidence 7999999876543321 124678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEE
Q psy7365 467 RFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT 509 (601)
Q Consensus 467 ~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv 509 (601)
+.++++|++++++|+|||++||+++++..+|||+++|++|+++
T Consensus 163 ~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 163 ERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999777999999999999999999999999999874
No 424
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=4.1e-30 Score=270.79 Aligned_cols=194 Identities=20% Similarity=0.263 Sum_probs=158.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------------------cccccccc
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------------------APQKSYIG 375 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------------------~~~~~~ig 375 (601)
+++++...-++.+++++... +|++++++ +..|+.++.+.+... ...++.+|
T Consensus 43 ~~vsl~i~~Ge~~~I~G~nG---sGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig 119 (320)
T PRK13631 43 NNISYTFEKNKIYFIIGNSG---SGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVS 119 (320)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccccccccccccchHHHHHhcEE
Confidence 78888888899999997522 45554432 333444443333211 12357799
Q ss_pred cCCCCc--ccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEE
Q psy7365 376 YCPQFD--ALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLI 452 (601)
Q Consensus 376 ~v~Q~~--~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lL 452 (601)
|+||++ .+++ .|++||+.|.....+.+..+..+++.++++.++|. +..++++.+||||||||++||+||+.+|++|
T Consensus 120 ~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iL 198 (320)
T PRK13631 120 MVFQFPEYQLFK-DTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLSGGQKRRVAIAGILAIQPEIL 198 (320)
T ss_pred EEEECchhcccc-chHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999997 3554 59999998765444555555667788999999996 6789999999999999999999999999999
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 453 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 453 lLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||||||+|||+.+++.++++|++++++|+|||++|||++++..+|||+++|++|++++.|+++++..
T Consensus 199 LLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 199 IFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred EEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999998779999999999999999999999999999999999998854
No 425
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5e-30 Score=264.90 Aligned_cols=195 Identities=20% Similarity=0.290 Sum_probs=160.8
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCC---cccccccccCCCCcc-cCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKS---APQKSYIGYCPQFDA-LNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~-l~~~lTv~ 390 (601)
|++++...-++.+++++... .|+++++ ++..|+.++.+.+... ...++.+||+||++. .+...|+.
T Consensus 21 ~~vsl~i~~Ge~~~i~G~NG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 97 (277)
T PRK13652 21 NNINFIAPRNSRIAVIGPNG---AGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVE 97 (277)
T ss_pred eEeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHH
Confidence 89999999999999997522 4555443 2333444444443322 123467999999974 34468999
Q ss_pred HHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHH
Q psy7365 391 EHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLW 470 (601)
Q Consensus 391 E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~ 470 (601)
||+.+.....+.......+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.++
T Consensus 98 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~ 177 (277)
T PRK13652 98 QDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELI 177 (277)
T ss_pred HHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 99987655445555555667899999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 471 TCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 471 ~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++|++++++ |+|||++||+++++.++|||+++|++|+++..|+++++.+
T Consensus 178 ~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 178 DFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999775 8999999999999999999999999999999999999864
No 426
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.97 E-value=7e-30 Score=259.07 Aligned_cols=193 Identities=22% Similarity=0.315 Sum_probs=157.9
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cc-----cccccccccccCC-----cccccccccCCCCcccC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NS-----FARGYYLSLDMKS-----APQKSYIGYCPQFDALN 384 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~-----~g~g~~igld~~~-----~~~~~~ig~v~Q~~~l~ 384 (601)
+++++...-++.+++++... .|++++++ +. .|+.++.+.+... ...++.++|+||++.++
T Consensus 18 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 18 KNINLDIPKNQVTALIGPSG---CGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred cceeEEECCCCEEEEECCCC---CCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 88999999999999997421 45554332 22 3444343433321 12356799999999888
Q ss_pred CCCCHHHHHHHhHHhcCC-ChhHHHHHHHHHHHHcCCC----cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 385 DRLTPREHLEFYSRVRNL-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~-~~~~~~~~~~~lLe~~~L~----~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
+ .|++||+.+....++. +..+..+.+.++++.+++. +..++++.+||||||||++||+||+.+|+++||||||+
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~ 173 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTS 173 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 8 9999999886554442 3344556788999999998 67889999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||+.++..++++|+++++ ++|||++||+++++..+|||+++|++|+++..|+++++..
T Consensus 174 ~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 174 ALDPIATGKIEELIQELKK-KYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred cCCHHHHHHHHHHHHHHHh-cCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999876 4899999999999999999999999999999999988754
No 427
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.97 E-value=9.4e-30 Score=257.10 Aligned_cols=193 Identities=22% Similarity=0.264 Sum_probs=156.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc----cccccccCCCCcccCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP----QKSYIGYCPQFDALNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~----~~~~ig~v~Q~~~l~~~lTv~ 390 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+..... .++.++|+||++.+++.+|++
T Consensus 19 ~~vs~~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 95 (242)
T TIGR03411 19 NDLSLYVDPGELRVIIGPNG---AGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVF 95 (242)
T ss_pred eeeeEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHH
Confidence 88898888999999997522 45554432 23344444443332111 234699999999999999999
Q ss_pred HHHHHhHHhc--------CCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCC
Q psy7365 391 EHLEFYSRVR--------NLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMD 462 (601)
Q Consensus 391 E~L~~~~~~~--------g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD 462 (601)
||+.+..... +......++++.++++.+++.+..++++.+||||||||++||+|++.+|++|+|||||+|||
T Consensus 96 ~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD 175 (242)
T TIGR03411 96 ENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMT 175 (242)
T ss_pred HHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCC
Confidence 9998754311 11223345678899999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 463 PGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 463 ~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
+.++..++++|+++.+ ++|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 176 ~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 176 DEETEKTAELLKSLAG-KHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred HHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 9999999999999865 789999999999999999999999999999999998874
No 428
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=7e-30 Score=258.18 Aligned_cols=199 Identities=20% Similarity=0.280 Sum_probs=161.2
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccC---------Cccccccccc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMK---------SAPQKSYIGY 376 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~---------~~~~~~~ig~ 376 (601)
.++.++ |++++...-++.+++++... .|++++++ +..|+..+.+.+.. ....++.++|
T Consensus 13 ~~~~il---~~vsl~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~ 86 (242)
T PRK11124 13 GAHQAL---FDITLDCPQGETLVLLGPSG---AGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGM 86 (242)
T ss_pred CCeeeE---eeeeeEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHHhheEE
Confidence 344554 89999999999999998522 45554432 23333333333321 0123567999
Q ss_pred CCCCcccCCCCCHHHHHHH-hHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEE
Q psy7365 377 CPQFDALNDRLTPREHLEF-YSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLD 455 (601)
Q Consensus 377 v~Q~~~l~~~lTv~E~L~~-~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLD 455 (601)
+||++.+++.+|+.||+.+ ....++....+..+++.++++.+|+.+..++++.+||||||||++||+||+.+|+++|||
T Consensus 87 ~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llilD 166 (242)
T PRK11124 87 VFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARALMMEPQVLLFD 166 (242)
T ss_pred EecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 9999999999999999975 333444444444567889999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 456 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 456 EPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
|||+|||+.++..++++|+++.++|+|||++||+++++..+|||+++|++|+++..|+++++
T Consensus 167 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 167 EPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 99999999999999999999977799999999999999999999999999999999998765
No 429
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=99.97 E-value=1.1e-30 Score=292.50 Aligned_cols=178 Identities=28% Similarity=0.395 Sum_probs=142.0
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCCch
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRTDM 123 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~~~ 123 (601)
+.++||++.|+. ..++++|+||++++ .||||| ||||| .++|+|+++|++|+|.++|.++..-.
T Consensus 335 I~~~~vsf~Y~~---~~~vL~~isl~i~~G~~vaIvG~SGs--GKSTL------l~lL~g~~~p~~G~I~i~g~~i~~~~ 403 (529)
T TIGR02868 335 LELRDLSFGYPG---SPPVLDGVSLDLPPGERVAILGPSGS--GKSTL------LMLLTGLLDPLQGEVTLDGVSVSSLQ 403 (529)
T ss_pred EEEEEEEEecCC---CCceeecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCCCCCCcEEEECCEEhhhHH
Confidence 559999999853 23599999999988 999999 56655 57999999999999999999987555
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCccc-----------CCccccCChHHH
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKR-----------TSLANTLSGGMQ 192 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgG~~ 192 (601)
..+|+.+|||||+|.+|. -|++||+.++.. ..+ ++++.++++..|+.+.. ......||||||
T Consensus 404 ~~lr~~i~~V~Q~~~lF~-~TI~eNI~~g~~--~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQr 476 (529)
T TIGR02868 404 DELRRRISVFAQDAHLFD-TTVRDNLRLGRP--DAT----DEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGER 476 (529)
T ss_pred HHHHhheEEEccCccccc-ccHHHHHhccCC--CCC----HHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHH
Confidence 567889999999999985 499999988632 122 23455666666654432 233467999999
Q ss_pred hhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHh
Q psy7365 193 RKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFA 272 (601)
Q Consensus 193 qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 272 (601)
||+++|||++.|
T Consensus 477 QRiaiARall~~-------------------------------------------------------------------- 488 (529)
T TIGR02868 477 QRLALARALLAD-------------------------------------------------------------------- 488 (529)
T ss_pred HHHHHHHHHhcC--------------------------------------------------------------------
Confidence 999876554433
Q ss_pred hccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecch
Q psy7365 273 MSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYM 324 (601)
Q Consensus 273 ~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl 324 (601)
|+++|||||||+||+.+...+.+.+.++ .+++|+|++||++
T Consensus 489 -----~~iliLDE~TSaLD~~te~~I~~~l~~~------~~~~TvIiItHrl 529 (529)
T TIGR02868 489 -----APILLLDEPTEHLDAGTESELLEDLLAA------LSGKTVVVITHHL 529 (529)
T ss_pred -----CCEEEEeCCcccCCHHHHHHHHHHHHHh------cCCCEEEEEecCC
Confidence 4899999999999999999999999875 3589999999984
No 430
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=99.97 E-value=5.1e-30 Score=254.03 Aligned_cols=188 Identities=19% Similarity=0.264 Sum_probs=153.7
Q ss_pred cEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCc
Q psy7365 315 RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFD 381 (601)
Q Consensus 315 ~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~ 381 (601)
++++ +++++...-++.+++++... .|++++++ +..|..++.+.+.... ..++.++|+||++
T Consensus 14 ~~~l---~~~sl~i~~G~~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~ 87 (214)
T cd03292 14 TAAL---DGINISISAGEFVFLVGPSG---AGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDF 87 (214)
T ss_pred ceee---eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHheEEEecCc
Confidence 4555 88899889999999998522 45554432 2333333333332211 1346799999999
Q ss_pred ccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCC
Q psy7365 382 ALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGM 461 (601)
Q Consensus 382 ~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGL 461 (601)
.+++.+|++||+.+....++.......+++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+||
T Consensus 88 ~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~L 167 (214)
T cd03292 88 RLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNSPTILIADEPTGNL 167 (214)
T ss_pred hhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcC
Confidence 99999999999988765555444455567889999999998889999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEE
Q psy7365 462 DPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 508 (601)
Q Consensus 462 D~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~i 508 (601)
|+.+++.+++.|+++.++|+|||++||+++++..+||++++|++|++
T Consensus 168 D~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 168 DPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999977799999999999999999999999999974
No 431
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=5.6e-30 Score=264.15 Aligned_cols=194 Identities=22% Similarity=0.293 Sum_probs=160.3
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCC----cccccccccCCCCcc-cCCCCCH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKS----APQKSYIGYCPQFDA-LNDRLTP 389 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~----~~~~~~ig~v~Q~~~-l~~~lTv 389 (601)
+++++...-++.+++++... .|+++++ ++..|..++.+.+... ...++.+||+||++. .+...|+
T Consensus 19 ~~vsl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv 95 (274)
T PRK13644 19 ENINLVIKKGEYIGIIGKNG---SGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTV 95 (274)
T ss_pred eeeEEEEeCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEEEEEChhhhcccchH
Confidence 88999999999999997522 4555443 2333444444443322 123467999999975 4667899
Q ss_pred HHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHH
Q psy7365 390 REHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFL 469 (601)
Q Consensus 390 ~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i 469 (601)
.||+.+....++.+..+..+++.++++.++|.+..++++.+||||||||++||+||+.+|+++||||||+|||+.++..+
T Consensus 96 ~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l 175 (274)
T PRK13644 96 EEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAV 175 (274)
T ss_pred HHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHH
Confidence 99998866555555555567788999999999989999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 470 WTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 470 ~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++.|++++++|+|||++|||++++. .|||+++|++|++++.|+++++..
T Consensus 176 ~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 176 LERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999877999999999999995 599999999999999999998754
No 432
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=7.7e-30 Score=262.54 Aligned_cols=201 Identities=20% Similarity=0.313 Sum_probs=161.4
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccC--C---cccccccccCCCC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMK--S---APQKSYIGYCPQF 380 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~--~---~~~~~~ig~v~Q~ 380 (601)
.++.++ +++++...-++.+++++... .|++++++ +..|..++.+.++. . ...++.+||+||+
T Consensus 12 ~~~~il---~~isl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 85 (271)
T PRK13638 12 QDEPVL---KGLNLDFSLSPVTGLVGANG---CGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQD 85 (271)
T ss_pred CCcccc---cceEEEEcCCCEEEEECCCC---CCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheEEEeeC
Confidence 344444 88888888999999997522 45555443 23344333343332 1 1234679999999
Q ss_pred ccc-CCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 381 DAL-NDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 381 ~~l-~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
+.+ +...|+.+|+.+....++....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+
T Consensus 86 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~ 165 (271)
T PRK13638 86 PEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTA 165 (271)
T ss_pred hhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 753 3456899999876555555444455678889999999988899999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||+.++..++++|++++++|+|||++|||++++..+|||+++|++|++++.|+++++..
T Consensus 166 ~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 166 GLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999998779999999999999999999999999999999999988754
No 433
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=99.97 E-value=1e-29 Score=268.43 Aligned_cols=149 Identities=25% Similarity=0.396 Sum_probs=137.5
Q ss_pred ccccccCCCCcccCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCC
Q psy7365 371 KSYIGYCPQFDALNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTP 450 (601)
Q Consensus 371 ~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~ 450 (601)
++.+||+||++.+|+.+|++||+.|....++.+..+.+++++++++.++|.+..++++.+||||||||++||+||+.+|+
T Consensus 41 ~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qRvalaraL~~~p~ 120 (325)
T TIGR01187 41 LRHINMVFQSYALFPHMTVEENVAFGLKMRKVPRAEIKPRVLEALRLVQLEEFADRKPHQLSGGQQQRVALARALVFKPK 120 (325)
T ss_pred HCCEEEEecCccccCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCcchhcCChhhCCHHHHHHHHHHHHHHhCCC
Confidence 56799999999999999999999987665555545556678999999999999999999999999999999999999999
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 451 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 451 lLlLDEPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++||||||+|||+.+++.+++.|+++.++ |+|||++|||++++..+|||+++|++|+++..|+++++.+
T Consensus 121 lllLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tiiivTHd~~e~~~~~d~i~vl~~G~i~~~g~~~~~~~ 190 (325)
T TIGR01187 121 ILLLDEPLSALDKKLRDQMQLELKTIQEQLGITFVFVTHDQEEAMTMSDRIAIMRKGKIAQIGTPEEIYE 190 (325)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999998765 8999999999999999999999999999999999998865
No 434
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1e-29 Score=268.54 Aligned_cols=196 Identities=20% Similarity=0.265 Sum_probs=161.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCc--ccCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFD--ALNDR 386 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~--~l~~~ 386 (601)
+++++...-++.+++++... +|++++++ ...|+.++.+.++... ..++++||+||++ .+.+.
T Consensus 32 ~~vsl~i~~Ge~~~IvG~sG---sGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~ 108 (327)
T PRK11308 32 DGVSFTLERGKTLAVVGESG---CGKSTLARLLTMIETPTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPR 108 (327)
T ss_pred eeeEEEECCCCEEEEECCCC---CcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCc
Confidence 89999999999999997521 44444322 2334444444443221 2356799999997 58888
Q ss_pred CCHHHHHHHhHHhc-CCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 387 LTPREHLEFYSRVR-NLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 387 lTv~E~L~~~~~~~-g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+|+.+++.+....+ +....+.++++.++++.+||. ...++++.+||||||||++||+||+.+|++||+||||+|||+.
T Consensus 109 ~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~ 188 (327)
T PRK11308 109 KKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVS 188 (327)
T ss_pred cCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHH
Confidence 99999987655443 344555667889999999996 4679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
++.+++++|++++++ |.|||++|||++++..+||||++|++|+++..|+++++.+.
T Consensus 189 ~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~~~~ 245 (327)
T PRK11308 189 VQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQIFNN 245 (327)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999765 99999999999999999999999999999999999998764
No 435
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=9.9e-30 Score=255.81 Aligned_cols=189 Identities=21% Similarity=0.313 Sum_probs=154.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc------c-ccccccCCCCcccCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP------Q-KSYIGYCPQFDALNDRL 387 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~------~-~~~ig~v~Q~~~l~~~l 387 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+..... . ++.+||+||++.+++.+
T Consensus 26 ~~isl~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (233)
T PRK11629 26 HNVSFSIGEGEMMAIVGSSG---SGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF 102 (233)
T ss_pred EeeEEEEcCCcEEEEECCCC---CCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCC
Confidence 88999989999999997522 45554432 33344444444432211 1 25699999999999999
Q ss_pred CHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 388 TPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 388 Tv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
|++||+.+...+.+....+.++++.++++.++|.+..++++.+||||||||++||+|++.+|++|||||||+|||+.+++
T Consensus 103 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~ 182 (233)
T PRK11629 103 TALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNAD 182 (233)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Confidence 99999988655444444455567889999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCH
Q psy7365 468 FLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSA 514 (601)
Q Consensus 468 ~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~ 514 (601)
.++++|+++++ +|+|||++|||+++++.+ |++++|++|++++.++.
T Consensus 183 ~l~~~l~~~~~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 183 SIFQLLGELNRLQGTAFLVVTHDLQLAKRM-SRQLEMRDGRLTAELSL 229 (233)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCHHHHHhh-CEEEEEECCEEEEEecc
Confidence 99999999875 589999999999999885 69999999999988763
No 436
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=99.97 E-value=9.9e-30 Score=260.02 Aligned_cols=200 Identities=21% Similarity=0.320 Sum_probs=160.2
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCccc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFDAL 383 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~l 383 (601)
++.++ +++++...-++.+++++... .|++++++ +..|..++.+.+... ...++.++|+||++.+
T Consensus 14 ~~~il---~~is~~i~~Ge~~~i~G~nG---sGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~ 87 (258)
T PRK13548 14 GRTLL---DDVSLTLRPGEVVAILGPNG---AGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVLPQHSSL 87 (258)
T ss_pred Ceeee---eeeeEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEEccCCcC
Confidence 44444 88999999999999997522 45554432 233433333333221 1224579999999988
Q ss_pred CCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHh------CCCCEEEEECC
Q psy7365 384 NDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALL------GNTPLIFLDEP 457 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~------~~P~lLlLDEP 457 (601)
++.+|++||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++||+||+ .+|++||||||
T Consensus 88 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEP 167 (258)
T PRK13548 88 SFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEP 167 (258)
T ss_pred CCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCC
Confidence 888999999987543333222334456889999999998889999999999999999999999 59999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 458 TSGMDPGARRFLWTCIERAV-SEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 458 TsGLD~~~~~~i~~lL~~l~-~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|+|||+.+++.+.++|+++. ++|+|||++|||++++..+|||+++|++|+++..|+++++..
T Consensus 168 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 168 TSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 99999999999999999997 669999999999999999999999999999999999887643
No 437
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=7.4e-30 Score=263.96 Aligned_cols=194 Identities=20% Similarity=0.270 Sum_probs=161.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCCc---ccccccccCCCCcc-cCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKSA---PQKSYIGYCPQFDA-LNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~~---~~~~~ig~v~Q~~~-l~~~lTv~ 390 (601)
+++++...-++.+++++... .|+++++ ++..|+.++.+.+.... ..++.+||+||++. +++..|+.
T Consensus 24 ~~vsl~i~~Ge~~~i~G~nG---aGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 100 (279)
T PRK13635 24 KDVSFSVYEGEWVAIVGHNG---SGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQ 100 (279)
T ss_pred eeeEEEEcCCCEEEEECCCC---CcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHH
Confidence 88898888999999997522 4555443 23344444445443321 23567999999974 67778999
Q ss_pred HHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHH
Q psy7365 391 EHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLW 470 (601)
Q Consensus 391 E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~ 470 (601)
||+.+.....+.+.++..+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.++
T Consensus 101 enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~ 180 (279)
T PRK13635 101 DDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVL 180 (279)
T ss_pred HHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 99988765555555555677899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 471 TCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 471 ~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++|++++++ |+|||++||++++++. |||+++|++|++++.|+++++..
T Consensus 181 ~~l~~l~~~~~~tilivsH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 181 ETVRQLKEQKGITVLSITHDLDEAAQ-ADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHHHHHHcCCCEEEEEecCHHHHHc-CCEEEEEECCEEEEECCHHHHhc
Confidence 999999876 8999999999999975 99999999999999999988754
No 438
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.97 E-value=5.6e-30 Score=253.38 Aligned_cols=187 Identities=24% Similarity=0.355 Sum_probs=150.0
Q ss_pred cEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCcc-c
Q psy7365 315 RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFDA-L 383 (601)
Q Consensus 315 ~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~-l 383 (601)
++++ +++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.++|+||++. .
T Consensus 14 ~~il---~~vs~~i~~G~~~~l~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~ 87 (211)
T cd03225 14 RPAL---DDISLTIKKGEFVLIVGPNG---SGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQ 87 (211)
T ss_pred eeee---cceEEEEcCCcEEEEECCCC---CCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEEecChhhh
Confidence 4554 88898888999999997422 45555433 223333333333221 123567999999975 3
Q ss_pred CCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCH
Q psy7365 384 NDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDP 463 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~ 463 (601)
++.+|+.||+.+....++.......+++.++++.++|.+..++++.+||||||||++||+||+.+|+++||||||+|||+
T Consensus 88 ~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~ 167 (211)
T cd03225 88 FFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDP 167 (211)
T ss_pred cCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCH
Confidence 66789999998765544444444456788999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCE
Q psy7365 464 GARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 507 (601)
Q Consensus 464 ~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~ 507 (601)
.++..+++.|++++++|+|||++|||++++..+|||+++|++|+
T Consensus 168 ~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 168 AGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999998779999999999999999999999999985
No 439
>PLN03232 ABC transporter C family member; Provisional
Probab=99.97 E-value=2.7e-30 Score=318.39 Aligned_cols=203 Identities=20% Similarity=0.264 Sum_probs=164.1
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||+++|+. ...++|+|+||++++ +||||| ||||| .++|.|+++|++|+|.+||.|+.+ +
T Consensus 1235 I~f~nVsf~Y~~--~~~~vL~~isl~I~~GekvaIVG~SGS--GKSTL------~~lL~rl~~p~~G~I~IdG~di~~i~ 1304 (1495)
T PLN03232 1235 IKFEDVHLRYRP--GLPPVLHGLSFFVSPSEKVGVVGRTGA--GKSSM------LNALFRIVELEKGRIMIDDCDVAKFG 1304 (1495)
T ss_pred EEEEEEEEEECC--CCCcccccceEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCcCCCceEEECCEEhhhCC
Confidence 559999999842 234699999999998 999999 56654 569999999999999999999965 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCc-----------ccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPH-----------KRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgG~ 191 (601)
...+|+++++|||+|.+|.. |++||+.++. ..+.+ ++.++++..++.+ ........|||||
T Consensus 1305 ~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~---~~sde----ei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQ 1376 (1495)
T PLN03232 1305 LTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS---EHNDA----DLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQ 1376 (1495)
T ss_pred HHHHHhhcEEECCCCeeeCc-cHHHHcCCCC---CCCHH----HHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHH
Confidence 66789999999999999975 9999997642 23333 3445555555433 3344456899999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++|||++.+
T Consensus 1377 rQrlaLARALLr~------------------------------------------------------------------- 1389 (1495)
T PLN03232 1377 RQLLSLARALLRR------------------------------------------------------------------- 1389 (1495)
T ss_pred HHHHHHHHHHHhC-------------------------------------------------------------------
Confidence 9999866544332
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
|++||||||||+||+.+.+.+.+.|++. .+++|+|+++|+++.+.+ ||+|++|++|+++..|++..
T Consensus 1390 ------~~ILILDEATSaLD~~Te~~Iq~~L~~~------~~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~Gt~~e 1455 (1495)
T PLN03232 1390 ------SKILVLDEATASVDVRTDSLIQRTIREE------FKSCTMLVIAHRLNTIID-CDKILVLSSGQVLEYDSPQE 1455 (1495)
T ss_pred ------CCEEEEECCcccCCHHHHHHHHHHHHHH------cCCCEEEEEeCCHHHHHh-CCEEEEEECCEEEEECCHHH
Confidence 4899999999999999999999999876 358999999999988875 99999999999998887644
No 440
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.97 E-value=1.7e-29 Score=254.02 Aligned_cols=201 Identities=23% Similarity=0.379 Sum_probs=164.4
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-ccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-PQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-~~~~~ig~v~Q~~~l~ 384 (601)
.+++++ +++++....++.+++++... .|++++++ +..|..++.+.+.... ..++.+||+||++.++
T Consensus 11 ~~~~il---~~i~~~i~~Ge~~~i~G~nG---sGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~ 84 (232)
T cd03300 11 GGFVAL---DGVSLDIKEGEFFTLLGPSG---CGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQNYALF 84 (232)
T ss_pred CCeeee---ccceEEECCCCEEEEECCCC---CCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEecccccC
Confidence 344544 89999999999999998532 45554432 2223333333333221 1356799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|+.+|+.+....++.......+++.++++.+++.+..++.+.+||+|||||++||+||+.+|+++||||||+|||+.
T Consensus 85 ~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~ 164 (232)
T cd03300 85 PHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLK 164 (232)
T ss_pred CCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHH
Confidence 89999999987665555444445567889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++.++++|++++++ |+|||++||+++++..+|||+++|++|+++..|+++++..
T Consensus 165 ~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 165 LRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred HHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 999999999999765 8999999999999999999999999999999999888754
No 441
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=99.97 E-value=3.6e-30 Score=290.19 Aligned_cols=199 Identities=20% Similarity=0.268 Sum_probs=158.4
Q ss_pred hhhcccccccccCCC-ccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-
Q psy7365 50 SLFESLSENRDKLGI-DSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT- 121 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~- 121 (601)
+.++|+++.|+.... ..++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.++|.++..
T Consensus 338 i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGs--GKSTl------~~ll~g~~~p~~G~i~~~g~~i~~~ 409 (555)
T TIGR01194 338 IELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGC--GKSTL------AKLFCGLYIPQEGEILLDGAAVSAD 409 (555)
T ss_pred EEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEECCCC
Confidence 458999999864322 34699999999988 999999 56655 579999999999999999999865
Q ss_pred chHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCc------cccCChHHHhhh
Q psy7365 122 DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSL------ANTLSGGMQRKL 195 (601)
Q Consensus 122 ~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~------~~~LSgG~~qr~ 195 (601)
+....++.+++|+|++.+|. -|+++|. .++..++++.++++.+++.+..++. ...||||||||+
T Consensus 410 ~~~~~~~~i~~v~q~~~lf~-~ti~~n~---------~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~~~LSgGq~qRl 479 (555)
T TIGR01194 410 SRDDYRDLFSAIFADFHLFD-DLIGPDE---------GEHASLDNAQQYLQRLEIADKVKIEDGGFSTTTALSTGQQKRL 479 (555)
T ss_pred CHHHHHhhCcEEccChhhhh-hhhhccc---------ccchhHHHHHHHHHHcCCchhhcccccccCCcccCCHHHHHHH
Confidence 34567788999999998885 4778773 1122345678899999988765443 357999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
++|||++.+
T Consensus 480 alaRall~~----------------------------------------------------------------------- 488 (555)
T TIGR01194 480 ALICAWLED----------------------------------------------------------------------- 488 (555)
T ss_pred HHHHHHHcC-----------------------------------------------------------------------
Confidence 866544333
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHH-HHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLI-KVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCC 345 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~-~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~ 345 (601)
|+++||||||++||+.+.+.+++.+. .+ +..|+|+|++||+++.. ..||+|++|++|+++..
T Consensus 489 --~~ililDE~ts~LD~~~~~~i~~~l~~~~-----~~~~~tiiiisH~~~~~-~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 489 --RPILLFDEWAADQDPAFKRFFYEELLPDL-----KRQGKTIIIISHDDQYF-ELADQIIKLAAGCIVKD 551 (555)
T ss_pred --CCEEEEeCCccCCCHHHHHHHHHHHHHHH-----HhCCCEEEEEeccHHHH-HhCCEEEEEECCEEEEe
Confidence 58999999999999999999988654 33 23589999999999865 58999999999998653
No 442
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=99.97 E-value=8.1e-30 Score=272.17 Aligned_cols=193 Identities=21% Similarity=0.297 Sum_probs=158.0
Q ss_pred chhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------cccccccccCCCCcccCCCCC
Q psy7365 323 YMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------APQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 323 dl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------~~~~~~ig~v~Q~~~l~~~lT 388 (601)
++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.+||+||++.+|+.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nG---sGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSG---SGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 6777778889999997422 45555432 233333333333221 123567999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
|+||+.|..... ...+.+++++++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.
T Consensus 92 v~enl~~~~~~~--~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~ 169 (354)
T TIGR02142 92 VRGNLRYGMKRA--RPSERRISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYE 169 (354)
T ss_pred HHHHHHHHhhcc--ChhHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHH
Confidence 999998854322 223344568899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 469 LWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 469 i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
+++.|+++.++ |+|||++|||++++..+|||+++|++|+++..|+++++...
T Consensus 170 l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (354)
T TIGR02142 170 ILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS 222 (354)
T ss_pred HHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC
Confidence 99999999775 89999999999999999999999999999999999998654
No 443
>PLN03130 ABC transporter C family member; Provisional
Probab=99.97 E-value=2e-30 Score=320.21 Aligned_cols=204 Identities=20% Similarity=0.282 Sum_probs=164.8
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||+++|.. ...++|+|+||++.+ +||||| ||||| .++|.|+++|++|+|.+||.|+.+ +
T Consensus 1238 I~f~nVsf~Y~~--~~~~VL~~is~~I~~GekVaIVGrSGS--GKSTL------l~lL~rl~~p~~G~I~IDG~dI~~i~ 1307 (1622)
T PLN03130 1238 IKFEDVVLRYRP--ELPPVLHGLSFEISPSEKVGIVGRTGA--GKSSM------LNALFRIVELERGRILIDGCDISKFG 1307 (1622)
T ss_pred EEEEEEEEEeCC--CCCceecceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhCcCCCCCceEEECCEecccCC
Confidence 569999999842 234699999999988 999999 56654 569999999999999999999975 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-----------cccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-----------HKRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgG~ 191 (601)
...+|+++|+|||+|.+|.. |++||+.++. ..+.+ ++.++++..++. .........|||||
T Consensus 1308 l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~---~~tde----ei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQ 1379 (1622)
T PLN03130 1308 LMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN---EHNDA----DLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQ 1379 (1622)
T ss_pred HHHHHhccEEECCCCccccc-cHHHHhCcCC---CCCHH----HHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHH
Confidence 67789999999999999976 9999997653 22322 344555555443 33344456899999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||++||||++.+
T Consensus 1380 rQrlaLARALLr~------------------------------------------------------------------- 1392 (1622)
T PLN03130 1380 RQLLSLARALLRR------------------------------------------------------------------- 1392 (1622)
T ss_pred HHHHHHHHHHHcC-------------------------------------------------------------------
Confidence 9999866543322
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
|++||||||||+||+.+.+.+.+.|++. .+++|+|+++|+++.+.+ ||||++|++|+++..|++..+
T Consensus 1393 ------p~ILILDEATSaLD~~Te~~Iq~~I~~~------~~~~TvI~IAHRL~tI~~-~DrIlVLd~G~IvE~Gt~~eL 1459 (1622)
T PLN03130 1393 ------SKILVLDEATAAVDVRTDALIQKTIREE------FKSCTMLIIAHRLNTIID-CDRILVLDAGRVVEFDTPENL 1459 (1622)
T ss_pred ------CCEEEEECCCCCCCHHHHHHHHHHHHHH------CCCCEEEEEeCChHHHHh-CCEEEEEECCEEEEeCCHHHH
Confidence 4899999999999999999999999986 358999999999999875 999999999999998876543
No 444
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=99.96 E-value=7.9e-30 Score=272.02 Aligned_cols=189 Identities=21% Similarity=0.287 Sum_probs=156.2
Q ss_pred chhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------cccccccccCCCCcccCCCCC
Q psy7365 323 YMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------APQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 323 dl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------~~~~~~ig~v~Q~~~l~~~lT 388 (601)
++++...-++.+++++... +|++++++ +..|..++.+.+... ...++.+||+||++.+|+.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nG---sGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSG---AGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 6788888899999997522 45554432 223333333333211 123568999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
++||+.|... ....++++++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.
T Consensus 93 v~enl~~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~ 166 (352)
T PRK11144 93 VRGNLRYGMA------KSMVAQFDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRE 166 (352)
T ss_pred HHHHHHhhhh------hhhHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHH
Confidence 9999987432 1224568899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 469 LWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 469 i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
+++.|+++.++ |+|+|++|||++++..+|||+++|++|+++..|+++++.+.
T Consensus 167 l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 167 LLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred HHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 99999999765 89999999999999999999999999999999999998654
No 445
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=99.96 E-value=8.3e-30 Score=256.20 Aligned_cols=191 Identities=22% Similarity=0.273 Sum_probs=150.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcccCCCCCHHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDALNDRLTPREHLE 394 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~~~lTv~E~L~ 394 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+.... ....+|+||++.+++.+|+.||+.
T Consensus 2 ~~is~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~--~~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 2 KGVNLTIQQGEFISLIGHSG---CGKSTLLNLISGLAQPTSGGVILEGKQITEP--GPDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CceeEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEECCCC--ChhheEEecCcccCCCCCHHHHHH
Confidence 34555566788899987422 45555433 2333333333333221 123589999999999999999998
Q ss_pred HhHH--hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHH
Q psy7365 395 FYSR--VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTC 472 (601)
Q Consensus 395 ~~~~--~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~l 472 (601)
+... ..+....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 156 (230)
T TIGR01184 77 LAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEE 156 (230)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHH
Confidence 7532 12333344456688999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 473 IERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 473 L~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
|+++.++ |+|||++||+++++..+|||+++|++|+++..|++.++
T Consensus 157 l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 202 (230)
T TIGR01184 157 LMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEV 202 (230)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceec
Confidence 9998765 89999999999999999999999999999988865543
No 446
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.5e-29 Score=267.12 Aligned_cols=197 Identities=18% Similarity=0.169 Sum_probs=159.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------c----ccccccccccccCCcc-------cccccccCCCCc--
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------N----SFARGYYLSLDMKSAP-------QKSYIGYCPQFD-- 381 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~----~~g~g~~igld~~~~~-------~~~~ig~v~Q~~-- 381 (601)
+++++...-++.+++++... +|++++++ . +.|+..+.+.++.... .++.++|+||++
T Consensus 24 ~~vsl~i~~Ge~~~lvG~sG---sGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 100 (326)
T PRK11022 24 DRISYSVKQGEVVGIVGESG---SGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMT 100 (326)
T ss_pred eeeEEEECCCCEEEEECCCC---ChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchh
Confidence 89999999999999998521 44443321 1 2233344444432211 124699999997
Q ss_pred ccCCCCCHHHHHHHhHHhc-CCChhHHHHHHHHHHHHcCCCc---ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECC
Q psy7365 382 ALNDRLTPREHLEFYSRVR-NLPSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEP 457 (601)
Q Consensus 382 ~l~~~lTv~E~L~~~~~~~-g~~~~~~~~~~~~lLe~~~L~~---~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEP 457 (601)
.+++.+|+.+++....... +...++.++++.++|+.++|.+ ..++++.+|||||||||+||+||+.+|++||+|||
T Consensus 101 ~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEP 180 (326)
T PRK11022 101 SLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEP 180 (326)
T ss_pred hcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 4788899998887655433 4455556678999999999964 46889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHh
Q psy7365 458 TSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKY 521 (601)
Q Consensus 458 TsGLD~~~~~~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~ 521 (601)
|+|||+.++.+++++|+++++ .|.|+|++|||++++..+||||++|++|+|+..|+++++.+..
T Consensus 181 ts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~~~~p 245 (326)
T PRK11022 181 TTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDIFRAP 245 (326)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhhCC
Confidence 999999999999999999976 4999999999999999999999999999999999999987643
No 447
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=99.96 E-value=4.8e-30 Score=288.66 Aligned_cols=197 Identities=19% Similarity=0.263 Sum_probs=156.6
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
..++|+++.|+. ..++++|+||++.+ .||||| ||||| .++|+|+++|++|+|+++|.++.. +
T Consensus 323 i~~~~v~f~y~~---~~~~l~~i~~~i~~G~~~aivG~sGs--GKSTL------~~ll~g~~~~~~G~i~~~g~~~~~~~ 391 (547)
T PRK10522 323 LELRNVTFAYQD---NGFSVGPINLTIKRGELLFLIGGNGS--GKSTL------AMLLTGLYQPQSGEILLDGKPVTAEQ 391 (547)
T ss_pred EEEEEEEEEeCC---CCeEEecceEEEcCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCeEEEECCEECCCCC
Confidence 459999999852 24699999999998 999999 56665 579999999999999999999865 4
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcccCCc-----cccCChHHHhhhhc
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKRTSL-----ANTLSGGMQRKLDN 197 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgG~~qr~~~ 197 (601)
....++.++|+||++.+|. .|+++| + .+...+++.++++.+|+....+.. ..+||||||||+++
T Consensus 392 ~~~~~~~i~~v~q~~~lf~-~ti~~n--------~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~LSgGq~qRl~l 460 (547)
T PRK10522 392 PEDYRKLFSAVFTDFHLFD-QLLGPE--------G--KPANPALVEKWLERLKMAHKLELEDGRISNLKLSKGQKKRLAL 460 (547)
T ss_pred HHHHhhheEEEecChhHHH-Hhhccc--------c--CchHHHHHHHHHHHcCCchhhhccccCCCCCCCCHHHHHHHHH
Confidence 5567889999999998885 477776 1 112234577889999987653321 35899999999986
Q ss_pred hhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCC
Q psy7365 198 VKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVP 277 (601)
Q Consensus 198 ~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 277 (601)
|||++++
T Consensus 461 ARal~~~------------------------------------------------------------------------- 467 (547)
T PRK10522 461 LLALAEE------------------------------------------------------------------------- 467 (547)
T ss_pred HHHHhcC-------------------------------------------------------------------------
Confidence 6544333
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCcccccc
Q psy7365 278 ASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCG 346 (601)
Q Consensus 278 ~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G 346 (601)
|+++||||||++||+.+...+++.+.+.. +..|+|+|++||+.+. ...||++++|++|+++...
T Consensus 468 ~~ililDE~ts~LD~~~~~~i~~~l~~~~----~~~~~tvi~itH~~~~-~~~~d~i~~l~~G~i~e~~ 531 (547)
T PRK10522 468 RDILLLDEWAADQDPHFRREFYQVLLPLL----QEMGKTIFAISHDDHY-FIHADRLLEMRNGQLSELT 531 (547)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHH----HhCCCEEEEEEechHH-HHhCCEEEEEECCEEEEec
Confidence 48999999999999999999999887642 2248999999999976 4589999999999987653
No 448
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.4e-29 Score=258.53 Aligned_cols=189 Identities=20% Similarity=0.282 Sum_probs=155.6
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcccCCCCCHHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDALNDRLTPREHLE 394 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~~~lTv~E~L~ 394 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+... ....+||+||++.+++.+|+.||+.
T Consensus 18 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~e~l~ 92 (255)
T PRK11248 18 EDINLTLESGELLVVLGPSG---CGKTTLLNLIAGFVPYQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQDNVA 92 (255)
T ss_pred eeeeEEECCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHHHHHH
Confidence 88999999999999997522 45555433 233444333433321 2345899999999999999999998
Q ss_pred HhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q psy7365 395 FYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIE 474 (601)
Q Consensus 395 ~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~ 474 (601)
+....++....+..+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.++++|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~ 172 (255)
T PRK11248 93 FGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLL 172 (255)
T ss_pred hHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHH
Confidence 76555555544455678999999999988899999999999999999999999999999999999999999999999999
Q ss_pred HHHh-CCcEEEEEccChhHHHhhCCEEEEEe--CCEEEEecCHH
Q psy7365 475 RAVS-EGRCVILTSHNMEECEALCTKLTIMV--NGQFTCLGSAT 515 (601)
Q Consensus 475 ~l~~-~G~tVllsTHdl~e~~~l~drv~iL~--~G~iv~~G~~~ 515 (601)
++.+ +|+|||++|||++++..+|||+++|+ +|+++..++.+
T Consensus 173 ~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 173 KLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 9854 58999999999999999999999998 59999887754
No 449
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=99.96 E-value=1.7e-29 Score=249.78 Aligned_cols=203 Identities=23% Similarity=0.331 Sum_probs=170.0
Q ss_pred cCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc-------ccccccccccccccccCCcc----cccccccCCCC
Q psy7365 312 LSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV-------FLKNSFARGYYLSLDMKSAP----QKSYIGYCPQF 380 (601)
Q Consensus 312 ~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~-------lLk~~~g~g~~igld~~~~~----~~~~ig~v~Q~ 380 (601)
..|.+.+ .++++...-++.+.+++... .|+++ +++++.++.++.+.++...+ .+..|+.-||.
T Consensus 14 FGGl~Al---~~Vsl~v~~Gei~~LIGPNG---AGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~ 87 (250)
T COG0411 14 FGGLTAV---NDVSLEVRPGEIVGLIGPNG---AGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIARTFQI 87 (250)
T ss_pred cCCEEEE---eceeEEEcCCeEEEEECCCC---CCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccceeeccc
Confidence 4455555 89999999999999997421 34443 34556666666666655433 24568888999
Q ss_pred cccCCCCCHHHHHHHhHHhc-------C-----CChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCC
Q psy7365 381 DALNDRLTPREHLEFYSRVR-------N-----LPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 448 (601)
Q Consensus 381 ~~l~~~lTv~E~L~~~~~~~-------g-----~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~ 448 (601)
..+|+.|||.||+......+ + ...++..+++.++|+.+||.+.++++.++||+|||+||.||+||+.+
T Consensus 88 ~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 88 TRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAGNLSYGQQRRLEIARALATQ 167 (250)
T ss_pred ccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhhcCChhHhHHHHHHHHHhcC
Confidence 99999999999998753311 1 12355678899999999999999999999999999999999999999
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 449 TPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 449 P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
|++|+||||.+||.|....++.++|++++++ |.||+++.|||+.+..+||||++|+.|+++++|+|+++.+.
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~d 240 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRNN 240 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhcC
Confidence 9999999999999999999999999999875 79999999999999999999999999999999999998753
No 450
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.1e-29 Score=256.04 Aligned_cols=192 Identities=20% Similarity=0.274 Sum_probs=155.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc----ccccccccCCCCcccCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA----PQKSYIGYCPQFDALNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~----~~~~~ig~v~Q~~~l~~~lTv~ 390 (601)
+++++...-++.+++++... .|++++++ +..|+..+.+.+.... ..++.++|+||++.+++.+|+.
T Consensus 22 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 98 (237)
T PRK11614 22 HEVSLHINQGEIVTLIGANG---AGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVE 98 (237)
T ss_pred eeeEEEEcCCcEEEEECCCC---CCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCCcHH
Confidence 88899989999999997522 45544432 2334433344333221 1346799999999999989999
Q ss_pred HHHHHhHHhcCCChhHHHHHHHHHHHHc-CCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHH
Q psy7365 391 EHLEFYSRVRNLPSVLLNTIVNESLNKF-ALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFL 469 (601)
Q Consensus 391 E~L~~~~~~~g~~~~~~~~~~~~lLe~~-~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i 469 (601)
||+.+..... ......+.+.++++.+ ++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.+
T Consensus 99 ~~l~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l 176 (237)
T PRK11614 99 ENLAMGGFFA--ERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQI 176 (237)
T ss_pred HHHHHhhhcc--ChhHHHHHHHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHH
Confidence 9998753221 1223344567788888 577777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 470 WTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 470 ~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
++.|+++.++|+|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 177 ~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 177 FDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred HHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 9999999877999999999999999999999999999999999999885
No 451
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=99.96 E-value=9.1e-30 Score=252.06 Aligned_cols=184 Identities=22% Similarity=0.299 Sum_probs=150.8
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-----cccccccccCCCCcccCCCCCH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-----APQKSYIGYCPQFDALNDRLTP 389 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-----~~~~~~ig~v~Q~~~l~~~lTv 389 (601)
+++++....++.+++++... +|++++++ +..|+.++.+.+... ...++.++|+||++.+++.+|+
T Consensus 17 ~~~s~~i~~G~~~~l~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 93 (213)
T cd03262 17 KGIDLTVKKGEVVVIIGPSG---SGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPHLTV 93 (213)
T ss_pred cCceEEECCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceEEecccccCCCCcH
Confidence 88999989999999997522 45554432 233433333333311 1235679999999999999999
Q ss_pred HHHHHHhHH-hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 390 REHLEFYSR-VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 390 ~E~L~~~~~-~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
.||+.+... .++....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.
T Consensus 94 ~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~ 173 (213)
T cd03262 94 LENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGE 173 (213)
T ss_pred HHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHH
Confidence 999987643 3344444455678899999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEE
Q psy7365 469 LWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 508 (601)
Q Consensus 469 i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~i 508 (601)
++++|++++++|+|||++||+++++..+||++++|++|++
T Consensus 174 l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 174 VLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999987799999999999999999999999999974
No 452
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=1.1e-29 Score=252.11 Aligned_cols=184 Identities=27% Similarity=0.334 Sum_probs=148.1
Q ss_pred chhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------cccccccccCCCCcccCCCCC
Q psy7365 323 YMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------APQKSYIGYCPQFDALNDRLT 388 (601)
Q Consensus 323 dl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------~~~~~~ig~v~Q~~~l~~~lT 388 (601)
++++...- +.+++++... .|++++++ +..|+.++.+.+... ...++.++|+||++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASG---AGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 78888778 9999997522 44444332 223333333332211 123567999999999999999
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
+.||+.+....+ .....++++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.
T Consensus 92 ~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~ 169 (214)
T cd03297 92 VRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQ 169 (214)
T ss_pred HHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHH
Confidence 999998764322 222344578899999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 469 LWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 469 i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
++++|++++++ |+|||++||+++++..+|||+++|++|++++.|
T Consensus 170 l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 170 LLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999765 899999999999999999999999999998765
No 453
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.8e-29 Score=260.56 Aligned_cols=195 Identities=21% Similarity=0.271 Sum_probs=159.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-----cccccccccCCCCcc-cCCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-----APQKSYIGYCPQFDA-LNDRLT 388 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-----~~~~~~ig~v~Q~~~-l~~~lT 388 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.++|+||++. .+...|
T Consensus 19 ~~vsl~i~~Ge~~~l~G~nG---sGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~t 95 (275)
T PRK13639 19 KGINFKAEKGEMVALLGPNG---AGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLFAPT 95 (275)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhheEEEeeChhhhhcccc
Confidence 89999999999999997522 45554433 233444444433321 123567999999973 344579
Q ss_pred HHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 389 PREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 389 v~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
+.||+.+.....+....+..+++.++++.++|.++.++++.+||||||||++||+||+.+|+++||||||+|||+.++..
T Consensus 96 v~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~ 175 (275)
T PRK13639 96 VEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQ 175 (275)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHH
Confidence 99999875433344444555678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 469 LWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 469 i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++++|++++++|+|||++|||++++..+|||+++|++|++++.|+++++..
T Consensus 176 l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 176 IMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred HHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999998779999999999999999999999999999999999998754
No 454
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.96 E-value=1.6e-29 Score=253.84 Aligned_cols=195 Identities=17% Similarity=0.185 Sum_probs=155.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------c----ccccccccccccCCccc-ccccccCCCCcc--cCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------N----SFARGYYLSLDMKSAPQ-KSYIGYCPQFDA--LNDRL 387 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~----~~g~g~~igld~~~~~~-~~~ig~v~Q~~~--l~~~l 387 (601)
+++++-...++.+++++... .|++++++ + ..|+.++.+.+...... ++.++|++|++. +++.+
T Consensus 3 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 79 (230)
T TIGR02770 3 QDLNLSLKRGEVLALVGESG---SGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLF 79 (230)
T ss_pred cceeEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCccc
Confidence 55666667888999997522 44444332 2 23444444433322222 357999999985 56678
Q ss_pred CHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC---cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 388 TPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG---HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 388 Tv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~---~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
|+.+++.+.....+.......+++.++++.+++. +..++++.+|||||||||+||+||+.+|++|||||||+|||+.
T Consensus 80 t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~ 159 (230)
T TIGR02770 80 TMGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVV 159 (230)
T ss_pred CHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHH
Confidence 9999997765444433344456789999999997 5678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++.+++.|++++++ |+|||++||+++++..+|||+++|++|+++..|+++++..
T Consensus 160 ~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 215 (230)
T TIGR02770 160 NQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFY 215 (230)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999998764 8999999999999999999999999999999999998854
No 455
>KOG0057|consensus
Probab=99.96 E-value=2.6e-30 Score=278.15 Aligned_cols=200 Identities=25% Similarity=0.406 Sum_probs=162.4
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.|+|++..|+ ...+.|+++||++.+ .|+||| |||| . .|+|.++.. ++|+|.|||.++.. .
T Consensus 352 I~F~dV~f~y~---~k~~iL~gvsf~I~kGekVaIvG~nGs--GKST-----i-lr~LlrF~d-~sG~I~IdG~dik~~~ 419 (591)
T KOG0057|consen 352 IEFDDVHFSYG---PKRKVLKGVSFTIPKGEKVAIVGSNGS--GKST-----I-LRLLLRFFD-YSGSILIDGQDIKEVS 419 (591)
T ss_pred EEEEeeEEEeC---CCCceecceeEEecCCCEEEEECCCCC--CHHH-----H-HHHHHHHhc-cCCcEEECCeeHhhhC
Confidence 56999999986 223499999999988 999999 4554 4 579999999 99999999999975 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCcc-----------cCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHK-----------RTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~ 191 (601)
...+|+.||||||+..+| +-||.+|+.++.- ..+. +++-++.+++|+.+. .+.....|||||
T Consensus 420 ~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~--sas~----eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGe 492 (591)
T KOG0057|consen 420 LESLRQSIGVVPQDSVLF-NDTILYNIKYGNP--SASD----EEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGE 492 (591)
T ss_pred hHHhhhheeEeCCccccc-chhHHHHhhcCCC--CcCH----HHHHHHHHHcCcHHHHHhccccchhhHhhcccccccch
Confidence 667899999999999988 5699999987642 1222 344555566665432 345567799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
||||++|||+++|
T Consensus 493 kQrvslaRa~lKd------------------------------------------------------------------- 505 (591)
T KOG0057|consen 493 KQRVSLARAFLKD------------------------------------------------------------------- 505 (591)
T ss_pred HHHHHHHHHHhcC-------------------------------------------------------------------
Confidence 9999876655544
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSS 348 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~ 348 (601)
|+++++|||||+||..+.+++.+.+.+. ..|+|+|++-|+++.+. -||+|+++++|++...|+.
T Consensus 506 ------a~Il~~DEaTS~LD~~TE~~i~~~i~~~------~~~rTvI~IvH~l~ll~-~~DkI~~l~nG~v~e~gth 569 (591)
T KOG0057|consen 506 ------APILLLDEATSALDSETEREILDMIMDV------MSGRTVIMIVHRLDLLK-DFDKIIVLDNGTVKEYGTH 569 (591)
T ss_pred ------CCeEEecCcccccchhhHHHHHHHHHHh------cCCCeEEEEEecchhHh-cCCEEEEEECCeeEEeccH
Confidence 4799999999999999999999999874 47999999999998886 6999999999999888764
No 456
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=2.1e-29 Score=256.45 Aligned_cols=194 Identities=16% Similarity=0.216 Sum_probs=155.3
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc----cccccccCCCCcccCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP----QKSYIGYCPQFDALNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~----~~~~ig~v~Q~~~l~~~lTv~ 390 (601)
+++++...-++.+++++... .|++++++ +..|...+.+.+..... .+..++|+||++.+++.+|+.
T Consensus 22 ~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 98 (255)
T PRK11300 22 NNVNLEVREQEIVSLIGPNG---AGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREMTVI 98 (255)
T ss_pred EeeeeEEcCCeEEEEECCCC---CCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCCcHH
Confidence 78888888999999997522 45554432 23344333333332211 234588999999999999999
Q ss_pred HHHHHhHH----------hcCC-----ChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEE
Q psy7365 391 EHLEFYSR----------VRNL-----PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLD 455 (601)
Q Consensus 391 E~L~~~~~----------~~g~-----~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLD 455 (601)
||+.+... +++. ...+..+.+.++++.+++.+..++++.+||||||||++||+||+.+|++||||
T Consensus 99 enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 178 (255)
T PRK11300 99 ENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQAGNLAYGQQRRLEIARCMVTQPEILMLD 178 (255)
T ss_pred HHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99987432 1110 11123356788999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 456 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 456 EPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
|||+|||+.+++.++++|.+++++ |+|||++||+++++..+||++++|++|+++..|+++++.
T Consensus 179 EPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 242 (255)
T PRK11300 179 EPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIR 242 (255)
T ss_pred CCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHHHh
Confidence 999999999999999999999775 899999999999999999999999999999999998874
No 457
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.96 E-value=2e-29 Score=257.51 Aligned_cols=193 Identities=19% Similarity=0.261 Sum_probs=155.5
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccccc------------ccccccccccccCC-----cccccccccCCCCcccC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLKN------------SFARGYYLSLDMKS-----APQKSYIGYCPQFDALN 384 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~------------~~g~g~~igld~~~-----~~~~~~ig~v~Q~~~l~ 384 (601)
+++++-..-++.+++++... .|++++++. ..|+.++.+.+... ...++.+||+||++.++
T Consensus 29 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 29 KNVSMQIPKNSVTALIGPSG---CGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 88888888999999997422 444443321 23333333333221 12356799999999888
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC----cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~----~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
+ +|++||+.+....++.+.....+++.++++.+++. +..++++.+||||||||++||+||+.+|+++||||||+|
T Consensus 106 ~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~ 184 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSA 184 (258)
T ss_pred c-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcc
Confidence 7 89999998865555554444455688899999983 456889999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||+.++..++++|+++.+ |+|||++|||++++..+|||+++|++|+++..|+++++..
T Consensus 185 LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 185 LDPISTARIEDLIMNLKK-DYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred cCHHHHHHHHHHHHHHhh-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999864 7999999999999999999999999999999999998854
No 458
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=99.96 E-value=1.1e-29 Score=251.77 Aligned_cols=185 Identities=21% Similarity=0.343 Sum_probs=146.8
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcccC--CCCCHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDALN--DRLTPREH 392 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~--~~lTv~E~ 392 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+.. ..++.++|+||++.++ +.+|++||
T Consensus 16 ~~isl~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~e~ 90 (213)
T cd03235 16 EDVSFEVKPGEFLAIVGPNG---AGKSTLLKAILGLLKPTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISVRDV 90 (213)
T ss_pred ecceeEEcCCCEEEEECCCC---CCHHHHHHHHcCCCCCCCCEEEECCccHH--HHHhheEEeccccccccCCCCcHHHH
Confidence 89999999999999997522 45555433 22333333333221 2356799999998763 34799999
Q ss_pred HHHhHHhcC----CChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHH
Q psy7365 393 LEFYSRVRN----LPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRF 468 (601)
Q Consensus 393 L~~~~~~~g----~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~ 468 (601)
+.+....+. .......+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.
T Consensus 91 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~ 170 (213)
T cd03235 91 VLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQED 170 (213)
T ss_pred HHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHH
Confidence 987533211 1223345678899999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 469 LWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 469 i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
+++.|++++++|+|||++|||++++..+|||+++|++| +++.|
T Consensus 171 l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 171 IYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999778999999999999999999999999886 55543
No 459
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=1.9e-29 Score=254.29 Aligned_cols=195 Identities=27% Similarity=0.389 Sum_probs=161.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccc-------ccccccccccccccCC-cccccccccCCCCcccCCCCCHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFL-------KNSFARGYYLSLDMKS-APQKSYIGYCPQFDALNDRLTPREHL 393 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lL-------k~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~~~lTv~E~L 393 (601)
+++++...-++.+++++... .|+++++ ++..|..++.+.+... ...++.++|+||++.+++.+|+.||+
T Consensus 16 ~~is~~i~~Ge~~~i~G~nG---~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l 92 (235)
T cd03299 16 KNVSLEVERGDYFVILGPTG---SGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNI 92 (235)
T ss_pred eeeEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHH
Confidence 88888888999999997522 4444433 2333444444444322 12356799999999999999999999
Q ss_pred HHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHH
Q psy7365 394 EFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCI 473 (601)
Q Consensus 394 ~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL 473 (601)
.+.....+....+..+.+.++++.++|.+..++++.+||||||||++||+|++.+|++++|||||+|||+.+++.+++.|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l 172 (235)
T cd03299 93 AYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREEL 172 (235)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHH
Confidence 87655555444455667889999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 474 ERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 474 ~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++..+ |+|||++||+++++..+|||+++|++|++++.|+++++..
T Consensus 173 ~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 219 (235)
T cd03299 173 KKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFK 219 (235)
T ss_pred HHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 998765 9999999999999999999999999999999999887754
No 460
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=99.96 E-value=6.1e-30 Score=313.33 Aligned_cols=205 Identities=19% Similarity=0.299 Sum_probs=160.7
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC----------------
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV---------------- 107 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~---------------- 107 (601)
+.++||++.|... .+.++|+|+||++++ +||||| ||||+ .++|.|++.|
T Consensus 1166 I~f~nVsF~Y~~~-~~~~vL~~lsl~i~~G~~vAIVG~SGs--GKSTl------~~LL~r~ydp~~~~~~~~~~~~~~~~ 1236 (1466)
T PTZ00265 1166 IEIMDVNFRYISR-PNVPIYKDLTFSCDSKKTTAIVGETGS--GKSTV------MSLLMRFYDLKNDHHIVFKNEHTNDM 1236 (1466)
T ss_pred EEEEEEEEECCCC-CCCccccCeeEEEcCCCEEEEECCCCC--CHHHH------HHHHHHhCCCcccccccccccccccc
Confidence 5599999997532 135799999999998 999999 56654 5799999998
Q ss_pred --------------------------------------CeeEEEEccccCCC-chHHhcccEEEEccCCCCCCCCCHHHH
Q psy7365 108 --------------------------------------SSGTAKIYDHDIRT-DMTTIRRSLGVCPQYNALFDKLTVEEH 148 (601)
Q Consensus 108 --------------------------------------~~G~v~~~g~~~~~-~~~~~~~~ig~v~Q~~~~~~~~tv~e~ 148 (601)
++|+|++||.++.. +...+|+.+|||||+|.+| +.|++||
T Consensus 1237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreN 1315 (1466)
T PTZ00265 1237 TNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYEN 1315 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHH
Confidence 69999999999975 5567899999999999998 6899999
Q ss_pred HHHhHhhcCCChHHHHHHHHHHHHHcCC-----------CcccCCccccCChHHHhhhhchhhhcchhhHHHHHHHhhhh
Q psy7365 149 MWFYSQLKQVPKDLAQLEISNMIGDLGI-----------PHKRTSLANTLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAA 217 (601)
Q Consensus 149 l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~ 217 (601)
|.|+.. ..+.++ +.++++..++ .-........||||||||++|||||+.|
T Consensus 1316 I~~g~~--~at~ee----I~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~------------- 1376 (1466)
T PTZ00265 1316 IKFGKE--DATRED----VKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLRE------------- 1376 (1466)
T ss_pred HhcCCC--CCCHHH----HHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcC-------------
Confidence 998743 233333 4444444443 3333445567999999999866554333
Q ss_pred hhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccCCCcEEEEecCCCCCCHHHHHH
Q psy7365 218 NNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFVPASTVILDEPTSGVDPYSRRS 297 (601)
Q Consensus 218 ~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~ 297 (601)
|++||||||||+||+.+.+.
T Consensus 1377 ------------------------------------------------------------p~ILLLDEaTSaLD~~sE~~ 1396 (1466)
T PTZ00265 1377 ------------------------------------------------------------PKILLLDEATSSLDSNSEKL 1396 (1466)
T ss_pred ------------------------------------------------------------CCEEEEeCcccccCHHHHHH
Confidence 48999999999999999999
Q ss_pred HHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecC----Cccc-cccCc
Q psy7365 298 IWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAA----GKLQ-CCGSS 348 (601)
Q Consensus 298 l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~----GkIv-~~G~~ 348 (601)
+.+.|.++. ..+++|+|+++|+++.+. .||+|++|++ |+++ ..|+.
T Consensus 1397 I~~~L~~~~----~~~~~TvIiIaHRlsti~-~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1397 IEKTIVDIK----DKADKTIITIAHRIASIK-RSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred HHHHHHHHh----ccCCCEEEEEechHHHHH-hCCEEEEEeCCCCCCCEEEEecCH
Confidence 999998862 125899999999997765 6999999998 8854 56653
No 461
>PLN03140 ABC transporter G family member; Provisional
Probab=99.96 E-value=1.8e-29 Score=308.30 Aligned_cols=210 Identities=21% Similarity=0.285 Sum_probs=172.0
Q ss_pred hhcccccccccCC---------CccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCC--CeeEEE
Q psy7365 51 LFESLSENRDKLG---------IDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPV--SSGTAK 113 (601)
Q Consensus 51 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~--~~G~v~ 113 (601)
.++||++..+.+. ....+|+|+|+++.+ +||||| ||||| .++|+|..++ .+|+|.
T Consensus 869 ~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGa--GKTTL------L~~LaG~~~~g~~~G~I~ 940 (1470)
T PLN03140 869 SFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGA--GKTTL------MDVLAGRKTGGYIEGDIR 940 (1470)
T ss_pred EEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCC--CHHHH------HHHHcCCCCCCcccceEE
Confidence 4888888765332 234699999999999 999999 57665 6799999874 799999
Q ss_pred EccccCCCchHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhc---CCChHHHHHHHHHHHHHcCCCcccCCcc-----c
Q psy7365 114 IYDHDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLK---QVPKDLAQLEISNMIGDLGIPHKRTSLA-----N 185 (601)
Q Consensus 114 ~~g~~~~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 185 (601)
++|.+... ...++.+|||+|++.+++.+||+||+.|.+..+ ..+.++..++++++++.+||.+..++.+ .
T Consensus 941 inG~~~~~--~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~ 1018 (1470)
T PLN03140 941 ISGFPKKQ--ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVT 1018 (1470)
T ss_pred ECCccCCh--HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCC
Confidence 99988642 234667999999999999999999999987543 2344555667899999999999888886 5
Q ss_pred cCChHHHhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHH
Q psy7365 186 TLSGGMQRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILV 265 (601)
Q Consensus 186 ~LSgG~~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 265 (601)
.|||||||||+||++ ++.+
T Consensus 1019 ~LSgGerkRvsIa~a--------------------------------------L~~~----------------------- 1037 (1470)
T PLN03140 1019 GLSTEQRKRLTIAVE--------------------------------------LVAN----------------------- 1037 (1470)
T ss_pred CcCHHHHHHHHHHHH--------------------------------------HhhC-----------------------
Confidence 899999999986443 2233
Q ss_pred HHHHHHhhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchh-HHHhcCCEEEEecC-Cccc
Q psy7365 266 AVTVLFAMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMD-EADLLGDRIAIIAA-GKLQ 343 (601)
Q Consensus 266 a~~~~~~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~-~~~~l~Drv~vL~~-GkIv 343 (601)
|++|+|||||+|||+.++..+++.|+++. ..|+|||+++|+.+ ++...+|++++|.+ |+++
T Consensus 1038 ------------P~lL~LDEPTsgLD~~~a~~v~~~L~~l~-----~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v 1100 (1470)
T PLN03140 1038 ------------PSIIFMDEPTSGLDARAAAIVMRTVRNTV-----DTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI 1100 (1470)
T ss_pred ------------CCEEEEeCCCCCCCHHHHHHHHHHHHHHH-----HCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEE
Confidence 58999999999999999999999999983 35899999999998 57789999999986 8888
Q ss_pred cccCc
Q psy7365 344 CCGSS 348 (601)
Q Consensus 344 ~~G~~ 348 (601)
..|..
T Consensus 1101 ~~G~~ 1105 (1470)
T PLN03140 1101 YSGPL 1105 (1470)
T ss_pred EECCc
Confidence 77753
No 462
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.8e-29 Score=260.93 Aligned_cols=194 Identities=20% Similarity=0.265 Sum_probs=157.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-------cccccccccCCCCc--ccCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-------APQKSYIGYCPQFD--ALND 385 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-------~~~~~~ig~v~Q~~--~l~~ 385 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.++|+||++ .+++
T Consensus 24 ~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 100 (280)
T PRK13649 24 FDVNLTIEDGSYTAFIGHTG---SGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFE 100 (280)
T ss_pred eeeEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhcc
Confidence 88898888999999997522 45554432 233444333433321 12356799999997 3454
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
.|++||+.+....++...++..+.++++++.++|. ...++++.+||||||||++||+||+.+|++|||||||+|||+.
T Consensus 101 -~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~ 179 (280)
T PRK13649 101 -ETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPK 179 (280)
T ss_pred -ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHH
Confidence 69999998765555554445556788999999997 4679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++.+++.|++++++|+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 180 ~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 180 GRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999997779999999999999999999999999999999999988754
No 463
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.96 E-value=1.1e-29 Score=251.47 Aligned_cols=187 Identities=21% Similarity=0.307 Sum_probs=149.2
Q ss_pred chhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccCCCCCHHHHHH
Q psy7365 323 YMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALNDRLTPREHLE 394 (601)
Q Consensus 323 dl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~~~lTv~E~L~ 394 (601)
++++...-++++++++... .|++++++ +..|+.++.+.+... ...++.+||+||++.+++.+|++||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nG---sGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSG---SGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 7778888899999997522 45554432 233444333433321 123467999999999999999999998
Q ss_pred HhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q psy7365 395 FYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIE 474 (601)
Q Consensus 395 ~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~ 474 (601)
+.........+..++++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||+.++..++++|+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~ 172 (211)
T cd03298 93 LGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVL 172 (211)
T ss_pred cccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH
Confidence 75321111122345578899999999988899999999999999999999999999999999999999999999999999
Q ss_pred HHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 475 RAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 475 ~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
+++++ |+|||++||+++++..+|||+++|++|+++..|
T Consensus 173 ~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 173 DLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 98754 899999999999999999999999999998654
No 464
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=1.7e-29 Score=261.31 Aligned_cols=195 Identities=24% Similarity=0.303 Sum_probs=159.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC----cccccccccCCCCcc-cCCCCCH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS----APQKSYIGYCPQFDA-LNDRLTP 389 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~----~~~~~~ig~v~Q~~~-l~~~lTv 389 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+... ...++.+||+||++. .+...|+
T Consensus 27 ~~vs~~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v 103 (280)
T PRK13633 27 DDVNLEVKKGEFLVILGRNG---SGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIV 103 (280)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHHhhheEEEecChhhhhccccH
Confidence 88999888999999997522 45554432 233444444433322 123567999999974 2334699
Q ss_pred HHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHH
Q psy7365 390 REHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFL 469 (601)
Q Consensus 390 ~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i 469 (601)
.+|+.|.....+.+..+.+++++++++.++|.+..++++.+||||||||++||+||+.+|+++||||||+|||+.++..+
T Consensus 104 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l 183 (280)
T PRK13633 104 EEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREV 183 (280)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHH
Confidence 99998876555555555667789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 470 WTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 470 ~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
++.|++++++ |.|||++||+++++.. |||+++|++|++++.|+++++...
T Consensus 184 ~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 184 VNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999764 9999999999999986 999999999999999999998654
No 465
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=99.96 E-value=2.6e-29 Score=256.34 Aligned_cols=199 Identities=21% Similarity=0.326 Sum_probs=159.3
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCccc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFDAL 383 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~l 383 (601)
++.++ +++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.++|+||++.+
T Consensus 13 ~~~il---~~is~~i~~Ge~~~i~G~nG---sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~ 86 (256)
T TIGR03873 13 GRLIV---DGVDVTAPPGSLTGLLGPNG---SGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALVEQDSDT 86 (256)
T ss_pred CEEEE---eeeeEEEcCCcEEEEECCCC---CCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEecccCcc
Confidence 44444 89999999999999997522 45554432 233433333333222 1224569999999888
Q ss_pred CCCCCHHHHHHHhHH----hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 384 NDRLTPREHLEFYSR----VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~----~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
++.+|+.||+.+... .++....+..+++.++++.+++.+..++++.+||||||||++||+|++.+|+++||||||+
T Consensus 87 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~ 166 (256)
T TIGR03873 87 AVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQEPKLLLLDEPTN 166 (256)
T ss_pred CCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCccc
Confidence 888999999987421 1122223334568899999999988999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
|||+.++..++++|++++++|.|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 167 ~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (256)
T TIGR03873 167 HLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVL 225 (256)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhh
Confidence 99999999999999999877999999999999999999999999999999999988764
No 466
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=99.96 E-value=2e-29 Score=234.09 Aligned_cols=193 Identities=22% Similarity=0.297 Sum_probs=161.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccccc-------ccccccc--cccccCC-------cccccccccCCCCcccCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLKN-------SFARGYY--LSLDMKS-------APQKSYIGYCPQFDALND 385 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~-------~~g~g~~--igld~~~-------~~~~~~ig~v~Q~~~l~~ 385 (601)
||+.+-..-+|.+++++... .|++.+++. ..+.-.+ ..+|... ...|+.+|+|||...+||
T Consensus 19 fdi~l~~~~getlvllgpsg---agkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmvfqqy~lwp 95 (242)
T COG4161 19 FDITLDCPEGETLVLLGPSG---AGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMVFQQYNLWP 95 (242)
T ss_pred eeeeecCCCCCEEEEECCCC---CchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHHHHHHHhhhhhhhhhccCc
Confidence 78888888999999997522 333333221 1111000 1112111 124788999999999999
Q ss_pred CCCHHHHHHH-hHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 386 RLTPREHLEF-YSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 386 ~lTv~E~L~~-~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
++||.||+.- ..+..|+++++++.++.++|+++.|.+++|+.|-.|||||+|||+|||||+.+|++|++||||+.|||+
T Consensus 96 hltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~plhlsggqqqrvaiaralmmkpqvllfdeptaaldpe 175 (242)
T COG4161 96 HLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPE 175 (242)
T ss_pred hhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCceecccchhhhHHHHHHHhcCCcEEeecCcccccCHH
Confidence 9999999754 567789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 465 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
-..++.++|+++...|.|-+++||..+.+...+.||+.|++|+|+..|+.+..
T Consensus 176 itaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a~~f 228 (242)
T COG4161 176 ITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecchhhc
Confidence 99999999999999999999999999999999999999999999999997643
No 467
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=2.2e-29 Score=258.35 Aligned_cols=200 Identities=23% Similarity=0.299 Sum_probs=159.4
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccC---CcccccccccCCCCcc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMK---SAPQKSYIGYCPQFDA 382 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~---~~~~~~~ig~v~Q~~~ 382 (601)
.+++++ +++++...-++.+++++... .|++++++ +..|..++.+.+.. ....++.++|+||++.
T Consensus 22 ~~~~il---~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 95 (265)
T PRK10575 22 PGRTLL---HPLSLTFPAGKVTGLIGHNG---SGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLP 95 (265)
T ss_pred CCEEEE---eeeeeEEcCCCEEEEECCCC---CCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEEeccCCC
Confidence 345554 89999999999999997522 45554432 22333333333321 1123467999999988
Q ss_pred cCCCCCHHHHHHHhHH-hcC---CChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCC
Q psy7365 383 LNDRLTPREHLEFYSR-VRN---LPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPT 458 (601)
Q Consensus 383 l~~~lTv~E~L~~~~~-~~g---~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPT 458 (601)
+++.+|+.||+.+... ..+ .......+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||
T Consensus 96 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt 175 (265)
T PRK10575 96 AAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPT 175 (265)
T ss_pred CCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 8888999999987431 111 112233456889999999988889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 459 SGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 459 sGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
+|||+.+++.++++|+++.++ |.|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 176 ~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 176 SALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 999999999999999999765 899999999999999999999999999999999988764
No 468
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.96 E-value=2.4e-29 Score=250.61 Aligned_cols=184 Identities=20% Similarity=0.300 Sum_probs=148.5
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc------c-ccccccCCCCcccCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP------Q-KSYIGYCPQFDALNDRL 387 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~------~-~~~ig~v~Q~~~l~~~l 387 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+..... . ++.++|+||++.+++.+
T Consensus 22 ~~isl~i~~G~~~~i~G~nG---sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (221)
T TIGR02211 22 KGVSLSIGKGEIVAIVGSSG---SGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDF 98 (221)
T ss_pred eeeEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCC
Confidence 88899999999999997522 45555443 22333333333322111 1 25699999999999999
Q ss_pred CHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 388 TPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 388 Tv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
|++||+.+....++....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++
T Consensus 99 tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~ 178 (221)
T TIGR02211 99 TALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAK 178 (221)
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHH
Confidence 99999988654444443344567889999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEE
Q psy7365 468 FLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFT 509 (601)
Q Consensus 468 ~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv 509 (601)
.++++|++++++ |+|||++|||+++++. ||++++|++|+++
T Consensus 179 ~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 179 IIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999764 8999999999999975 8999999999975
No 469
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=99.96 E-value=3.3e-29 Score=250.23 Aligned_cols=187 Identities=26% Similarity=0.364 Sum_probs=154.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcccCCCCCHHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDALNDRLTPREHLE 394 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~~~lTv~E~L~ 394 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+.... ..+.++|+||++.+++.+|++||+.
T Consensus 17 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~-~~~~~~~~~q~~~~~~~~t~~~~~~ 92 (223)
T TIGR03740 17 NNISLTVPKNSVYGLLGPNG---AGKSTLLKMITGILRPTSGEIIFDGHPWTRK-DLHKIGSLIESPPLYENLTARENLK 92 (223)
T ss_pred eeeEEEEcCCcEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEecccc-ccccEEEEcCCCCccccCCHHHHHH
Confidence 88888888999999997522 45554432 2233333333322211 2357999999999899899999998
Q ss_pred HhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q psy7365 395 FYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIE 474 (601)
Q Consensus 395 ~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~ 474 (601)
++...++.+ .+++.++++.+++.+..++++.+||||||||++||+|++.+|++++|||||+|||+.+++.++++|+
T Consensus 93 ~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~ 168 (223)
T TIGR03740 93 VHTTLLGLP----DSRIDEVLNIVDLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIR 168 (223)
T ss_pred HHHHHcCCC----HHHHHHHHHHcCCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHH
Confidence 766554432 2457889999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHH
Q psy7365 475 RAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATH 516 (601)
Q Consensus 475 ~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~ 516 (601)
+++++|.|||++|||++++..+|||+++|++|+++..|++.+
T Consensus 169 ~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 169 SFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred HHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 997779999999999999999999999999999999998753
No 470
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=99.96 E-value=4e-29 Score=254.31 Aligned_cols=195 Identities=19% Similarity=0.221 Sum_probs=158.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC----------------cccccccccCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS----------------APQKSYIGYCP 378 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~----------------~~~~~~ig~v~ 378 (601)
+++++...-++.+++++... .|++++++ +..|...+.+.+... ...++.++|+|
T Consensus 17 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 93 (252)
T TIGR03005 17 DGLNFSVAAGEKVALIGPSG---SGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGMVF 93 (252)
T ss_pred eeeeEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchhHHHHHhhCeEEEe
Confidence 88999999999999997522 45544432 223333333322211 12356799999
Q ss_pred CCcccCCCCCHHHHHHHhHH-hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECC
Q psy7365 379 QFDALNDRLTPREHLEFYSR-VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEP 457 (601)
Q Consensus 379 Q~~~l~~~lTv~E~L~~~~~-~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEP 457 (601)
|++.+++.+|+.||+.+... ..+.......+.+.++++.+++.+..++++.+||||||||++||+||+.+|+++|||||
T Consensus 94 q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP 173 (252)
T TIGR03005 94 QSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSGGQQQRVAIARALAMRPKVMLFDEV 173 (252)
T ss_pred cCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 99999999999999987432 23344444556788999999999888999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 458 TSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 458 TsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|+|||+.++..++++|+++.++ |+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 174 ~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T TIGR03005 174 TSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIFR 236 (252)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999998765 8999999999999999999999999999999999988754
No 471
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=99.96 E-value=3.9e-29 Score=252.30 Aligned_cols=201 Identities=23% Similarity=0.357 Sum_probs=163.6
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-ccccccccCCCCcccC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-PQKSYIGYCPQFDALN 384 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-~~~~~ig~v~Q~~~l~ 384 (601)
.+++++ +++++...-++.+++++... .|++++++ +..|+..+.+.+.... ..++.++|+||++.+|
T Consensus 11 ~~~~il---~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~ 84 (237)
T TIGR00968 11 GSFQAL---DDVNLEVPTGSLVALLGPSG---SGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQHYALF 84 (237)
T ss_pred CCeeee---eeEEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEecChhhc
Confidence 345555 88898889999999997522 45554432 2233333333333221 2346799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 385 DRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+.+|+.||+.+....++.......+.+.++++.+++.+..++++.+||+||+||++||+||+.+|++++|||||+|||+.
T Consensus 85 ~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~ 164 (237)
T TIGR00968 85 KHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAK 164 (237)
T ss_pred cCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHH
Confidence 99999999987655554444444567889999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++.++++|++++++ |+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 165 ~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 165 VRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 999999999998776 8999999999999999999999999999999999998864
No 472
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.96 E-value=2.7e-29 Score=265.64 Aligned_cols=198 Identities=18% Similarity=0.222 Sum_probs=159.9
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cc---cccccccccccCCcc------c-ccccccCCCCc--c
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NS---FARGYYLSLDMKSAP------Q-KSYIGYCPQFD--A 382 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~---~g~g~~igld~~~~~------~-~~~ig~v~Q~~--~ 382 (601)
+++++...-++.+++++... +|++++++ +. .|+.++.+.++.... . ++.|+|+||++ .
T Consensus 33 ~~vsl~i~~Ge~~~ivG~sG---sGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~ 109 (330)
T PRK09473 33 NDLNFSLRAGETLGIVGESG---SGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTS 109 (330)
T ss_pred eeeEEEEcCCCEEEEECCCC---chHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhh
Confidence 88999999999999997522 44444321 21 344444444432211 1 24799999998 6
Q ss_pred cCCCCCHHHHHHHhHHhc-CCChhHHHHHHHHHHHHcCCCc---ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCC
Q psy7365 383 LNDRLTPREHLEFYSRVR-NLPSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPT 458 (601)
Q Consensus 383 l~~~lTv~E~L~~~~~~~-g~~~~~~~~~~~~lLe~~~L~~---~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPT 458 (601)
+++.+|+.+++.+....+ +....+..+++.++|+.++|.+ ..++.+.+||||||||++||+||+.+|++||+||||
T Consensus 110 l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPt 189 (330)
T PRK09473 110 LNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT 189 (330)
T ss_pred cCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 889999999987755444 3445555678899999999974 347799999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhC
Q psy7365 459 SGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYG 522 (601)
Q Consensus 459 sGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~ 522 (601)
+|||+.++..++++|++++++ |.|+|++|||++++..+||||++|++|+|+..|+++++.+...
T Consensus 190 s~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~i~~~p~ 254 (330)
T PRK09473 190 TALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPS 254 (330)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhCCC
Confidence 999999999999999999765 9999999999999999999999999999999999999876433
No 473
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=99.96 E-value=3.6e-29 Score=250.13 Aligned_cols=188 Identities=20% Similarity=0.252 Sum_probs=148.7
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC------cccccccccCCCCc--ccCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS------APQKSYIGYCPQFD--ALNDR 386 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~------~~~~~~ig~v~Q~~--~l~~~ 386 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.++.. ...++.+||+||++ .+++.
T Consensus 22 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 98 (228)
T cd03257 22 DDVSFSIKKGETLGLVGESG---SGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLNPR 98 (228)
T ss_pred cCceeEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcCCc
Confidence 88999999999999997522 45554432 233444444433322 12356799999998 46778
Q ss_pred CCHHHHHHHhHHhcCCChh-HHHHH-HHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCH
Q psy7365 387 LTPREHLEFYSRVRNLPSV-LLNTI-VNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDP 463 (601)
Q Consensus 387 lTv~E~L~~~~~~~g~~~~-~~~~~-~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~ 463 (601)
+|++||+.+....++.... ...+. +.++++.+++. ...++++.+||||||||++||+||+.+|++|||||||+|||+
T Consensus 99 ~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~ 178 (228)
T cd03257 99 MTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARALALNPKLLIADEPTSALDV 178 (228)
T ss_pred CCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCH
Confidence 9999999876544432221 22222 35889999995 678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 464 GARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 464 ~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
.+++.+++.|++++++ |+|||++||+++++..+|||+++|++|+++..|
T Consensus 179 ~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 179 SVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999776 899999999999999999999999999998754
No 474
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=2.7e-29 Score=252.46 Aligned_cols=194 Identities=20% Similarity=0.309 Sum_probs=154.5
Q ss_pred chhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc-ccccccccCCCCcccCCCCCHHHHHH
Q psy7365 323 YMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA-PQKSYIGYCPQFDALNDRLTPREHLE 394 (601)
Q Consensus 323 dl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~-~~~~~ig~v~Q~~~l~~~lTv~E~L~ 394 (601)
++++...-++.+++++... +|++++++ +..|+..+.+.+.... ..++.++|+||++.+++.+|+.||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSG---AGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 6677777889999987522 45555433 2223333333332211 12457999999999999999999997
Q ss_pred HhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q psy7365 395 FYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCIE 474 (601)
Q Consensus 395 ~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL~ 474 (601)
+.........+...+++.++++.+++.+..++++.+||||||||++||+|++.+|+++||||||+|||+.+++.++++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~ 173 (232)
T PRK10771 94 LGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVS 173 (232)
T ss_pred cccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 64321101122345668899999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 475 RAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 475 ~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++.++ |+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 174 ~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 174 QVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 98764 8999999999999999999999999999999999988764
No 475
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=2.5e-29 Score=256.34 Aligned_cols=199 Identities=22% Similarity=0.371 Sum_probs=158.3
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCccc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFDAL 383 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~l 383 (601)
+++++ +++++...-++.+++++... .|++++++ +..|...+.+.+... ...++.++|+||++.+
T Consensus 14 ~~~il---~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~ 87 (255)
T PRK11231 14 TKRIL---NDLSLSLPTGKITALIGPNG---CGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALLPQHHLT 87 (255)
T ss_pred CEEEE---eeeeeEEcCCcEEEEECCCC---CCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEecccCCC
Confidence 44544 88898889999999997522 45554432 222333333322211 1234569999999988
Q ss_pred CCCCCHHHHHHHhHH----hcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 384 NDRLTPREHLEFYSR----VRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 384 ~~~lTv~E~L~~~~~----~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
++.+|+.||+.+... .++.......+++.++++.+++.+..++++.+||||||||++||+|++.+|++|||||||+
T Consensus 88 ~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~ 167 (255)
T PRK11231 88 PEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQDTPVVLLDEPTT 167 (255)
T ss_pred CCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 888999999987421 1222223344568889999999988999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
|||+.+++.++++|+++.++|+|||++||+++++.++|||+++|++|+++..|+++++.
T Consensus 168 ~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 226 (255)
T PRK11231 168 YLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVM 226 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhc
Confidence 99999999999999998777999999999999999999999999999999999988764
No 476
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.96 E-value=3.6e-29 Score=250.97 Aligned_cols=191 Identities=24% Similarity=0.304 Sum_probs=154.4
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc----ccccccccCCCCcccCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA----PQKSYIGYCPQFDALNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~----~~~~~ig~v~Q~~~l~~~lTv~ 390 (601)
+++++...-++.+++++... +|++++++ +..|+.++.+.+.... ..++.++|+||++.+++.+|+.
T Consensus 17 ~~vs~~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 93 (230)
T TIGR03410 17 RGVSLEVPKGEVTCVLGRNG---VGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLTVE 93 (230)
T ss_pred cceeeEECCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCcHH
Confidence 88999999999999997522 45555432 2334433333332211 1245799999999999999999
Q ss_pred HHHHHhHHhcCCChhHHHHHHHHHHHHcC-CCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHH
Q psy7365 391 EHLEFYSRVRNLPSVLLNTIVNESLNKFA-LGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFL 469 (601)
Q Consensus 391 E~L~~~~~~~g~~~~~~~~~~~~lLe~~~-L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i 469 (601)
||+.+....++.. ..+...++++.++ +.+..++++.+||||||||++||+||+.+|+++||||||+|||+.+++.+
T Consensus 94 ~~l~~~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l 170 (230)
T TIGR03410 94 ENLLTGLAALPRR---SRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDI 170 (230)
T ss_pred HHHHHHHHhcCcc---hHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHH
Confidence 9998765444322 1234577788887 57778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 470 WTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 470 ~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
+++|.+++++ |+|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 171 ~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 171 GRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred HHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999998775 899999999999999999999999999999999998873
No 477
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.96 E-value=3.7e-29 Score=254.81 Aligned_cols=198 Identities=23% Similarity=0.294 Sum_probs=157.5
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------c-----ccccccccccccCC-----ccccccccc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------N-----SFARGYYLSLDMKS-----APQKSYIGY 376 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~-----~~g~g~~igld~~~-----~~~~~~ig~ 376 (601)
++.++ +++++...-++.+++++... .|++++++ + ..|+.++.+.+... ...++.+||
T Consensus 19 ~~~il---~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~ 92 (254)
T PRK14273 19 DFKAL---NNINIKILKNSITALIGPSG---CGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGM 92 (254)
T ss_pred Cceee---cceeeEEcCCCEEEEECCCC---CCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEE
Confidence 44444 89999999999999997522 45554332 1 12333333433211 123567999
Q ss_pred CCCCcccCCCCCHHHHHHHhHHhcCC-ChhHHHHHHHHHHHHcCC----CcccccccCcCChHHHHHHHHHHHHhCCCCE
Q psy7365 377 CPQFDALNDRLTPREHLEFYSRVRNL-PSVLLNTIVNESLNKFAL----GHYSDREVRTLSGGNKRKLSTAIALLGNTPL 451 (601)
Q Consensus 377 v~Q~~~l~~~lTv~E~L~~~~~~~g~-~~~~~~~~~~~lLe~~~L----~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~l 451 (601)
+||++.+++ +|++||+.+....++. ......+.+.++++.+++ .+..++++.+||||||||++||+||+.+|++
T Consensus 93 v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 171 (254)
T PRK14273 93 VFQTPNPFL-MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLAIEPNV 171 (254)
T ss_pred Eeecccccc-CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 999988875 8999999886544443 223345678889999987 3457889999999999999999999999999
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 452 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 452 LlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||||||+|||+.++..++++|++++ +++|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 172 llLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 238 (254)
T PRK14273 172 ILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFF 238 (254)
T ss_pred EEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999985 47999999999999999999999999999999999998864
No 478
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.96 E-value=4.5e-29 Score=253.47 Aligned_cols=194 Identities=18% Similarity=0.191 Sum_probs=156.3
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccccc------------ccccccccccccCC---cccccccccCCCCcccCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLKN------------SFARGYYLSLDMKS---APQKSYIGYCPQFDALNDR 386 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~------------~~g~g~~igld~~~---~~~~~~ig~v~Q~~~l~~~ 386 (601)
+++++...-++.+++++... +|++++++. ..|+.++.+.+... ...++.+||+||++.+++.
T Consensus 20 ~~is~~i~~Ge~~~i~G~nG---sGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 20 DGVNLEIPDNTITALMGPSG---SGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred ecceeEEcCCCEEEEECCCC---CCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 88999989999999997422 455443321 13333333433321 1235679999999988889
Q ss_pred CCHHHHHHHhHHhcCC--ChhHHHHHHHHHHHHcCCCc----ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCC
Q psy7365 387 LTPREHLEFYSRVRNL--PSVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSG 460 (601)
Q Consensus 387 lTv~E~L~~~~~~~g~--~~~~~~~~~~~lLe~~~L~~----~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsG 460 (601)
+|+.||+.+.....+. +..+..+.+.++++.++|.+ ..++++.+||||||||++||+||+.+|+++||||||+|
T Consensus 97 ~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~ 176 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIARALAFQPEVLLADEPTAN 176 (250)
T ss_pred CcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCcc
Confidence 9999999876543332 23344567889999999853 56889999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 461 MDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 461 LD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
||+.++..++++|+++.+ |+|||++||+++++..+|||+++|++|+++..|+++++..
T Consensus 177 LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14247 177 LDPENTAKIESLFLELKK-DMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFT 234 (250)
T ss_pred CCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHc
Confidence 999999999999999854 8999999999999999999999999999999999988753
No 479
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=99.96 E-value=7.6e-29 Score=250.32 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=157.0
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc---------cccccccccccccCCc---c-cccccccCCC
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK---------NSFARGYYLSLDMKSA---P-QKSYIGYCPQ 379 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk---------~~~g~g~~igld~~~~---~-~~~~ig~v~Q 379 (601)
.++.++ +++++...-++.+++++... .|++++++ +..|..++.+.+.... . .+..++|+||
T Consensus 11 ~~~~~l---~~isl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q 84 (243)
T TIGR01978 11 EDKEIL---KGVNLTVKKGEIHAIMGPNG---SGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQ 84 (243)
T ss_pred CCEEEE---eccceEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeec
Confidence 344544 89999999999999997421 44444332 2233333333332211 1 1334899999
Q ss_pred CcccCCCCCHHHHHHHhHHhcC-------CChhHHHHHHHHHHHHcCCC-cccccccC-cCChHHHHHHHHHHHHhCCCC
Q psy7365 380 FDALNDRLTPREHLEFYSRVRN-------LPSVLLNTIVNESLNKFALG-HYSDREVR-TLSGGNKRKLSTAIALLGNTP 450 (601)
Q Consensus 380 ~~~l~~~lTv~E~L~~~~~~~g-------~~~~~~~~~~~~lLe~~~L~-~~~~~~~~-~LSgGqkQRl~lA~AL~~~P~ 450 (601)
++.+++.+|+.|++.+...... ....+..+++.++++.++|. +..++++. +||||||||++||+||+.+|+
T Consensus 85 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 164 (243)
T TIGR01978 85 YPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQMALLEPK 164 (243)
T ss_pred cccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999987543221 12223345688999999997 46788887 599999999999999999999
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhh-CCEEEEEeCCEEEEecCHHHHH
Q psy7365 451 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEAL-CTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 451 lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l-~drv~iL~~G~iv~~G~~~~L~ 518 (601)
++||||||+|||+.+++.++++|++++++|+|||++||+++++..+ |||+++|++|+++..|+++++.
T Consensus 165 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 165 LAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhc
Confidence 9999999999999999999999999987799999999999999998 8999999999999999998654
No 480
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=99.96 E-value=5.4e-29 Score=255.48 Aligned_cols=195 Identities=21% Similarity=0.289 Sum_probs=157.5
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCc------ccccccccCCCCc--ccCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSA------PQKSYIGYCPQFD--ALNDR 386 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~------~~~~~ig~v~Q~~--~l~~~ 386 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+.... ..++.++|+||++ .+++.
T Consensus 28 ~~isl~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 104 (265)
T TIGR02769 28 TNVSLSIEEGETVGLLGRSG---CGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVNPR 104 (265)
T ss_pred eCceeEEcCCCEEEEECCCC---CCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcCCC
Confidence 89999999999999997522 45554432 2334443333333211 1245799999997 46678
Q ss_pred CCHHHHHHHhHHh-cCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 387 LTPREHLEFYSRV-RNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 387 lTv~E~L~~~~~~-~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
+|++||+.+.... .+.......+++.++++.+++. ...++++.+||||||||++||+||+++|++|||||||+|||+.
T Consensus 105 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~ 184 (265)
T TIGR02769 105 MTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMV 184 (265)
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 9999999765432 2333334456788999999996 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++..++++|+++.++ |+|||++|||++++..+|||+++|++|+++..|+++++..
T Consensus 185 ~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (265)
T TIGR02769 185 LQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLS 240 (265)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcC
Confidence 999999999998765 8999999999999999999999999999999999998754
No 481
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.96 E-value=3.6e-29 Score=248.44 Aligned_cols=189 Identities=21% Similarity=0.320 Sum_probs=151.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC-cccccccccCCCCcccCCCCCHHHHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS-APQKSYIGYCPQFDALNDRLTPREHL 393 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~-~~~~~~ig~v~Q~~~l~~~lTv~E~L 393 (601)
+++++...-++.+++++... .|++++++ +..|+.++.+.+... ...++.++|+||++.+++.+|+.||+
T Consensus 15 ~~~s~~i~~Ge~~~i~G~nG---sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en~ 91 (213)
T TIGR01277 15 MEFDLNVADGEIVAIMGPSG---AGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQNI 91 (213)
T ss_pred eeeEEEEeCCcEEEEECCCC---CCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHHH
Confidence 57788888899999997422 45554433 233334333433321 12356799999999999999999999
Q ss_pred HHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHH
Q psy7365 394 EFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLWTCI 473 (601)
Q Consensus 394 ~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~~lL 473 (601)
.+............++++.++++.+++.+..++++.+||||||||++||+|++.+|+++||||||+|||+.++..++++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l 171 (213)
T TIGR01277 92 GLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALV 171 (213)
T ss_pred HhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHH
Confidence 86432211112233456788999999998899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecC
Q psy7365 474 ERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 513 (601)
Q Consensus 474 ~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~ 513 (601)
+++.++ |+|||++||+++++..+||++++|++|++++.|.
T Consensus 172 ~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 172 KQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 998765 8999999999999999999999999999998874
No 482
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.96 E-value=6e-29 Score=253.01 Aligned_cols=199 Identities=19% Similarity=0.240 Sum_probs=158.6
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------c-----ccccccccccccC-----Cccccccccc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------N-----SFARGYYLSLDMK-----SAPQKSYIGY 376 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~-----~~g~g~~igld~~-----~~~~~~~ig~ 376 (601)
++.++ +++++...-++.+++++... .|++++++ + ..|+.++.+.++. ....++.++|
T Consensus 16 ~~~~l---~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~ 89 (253)
T PRK14267 16 SNHVI---KGVDLKIPQNGVFALMGPSG---CGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGM 89 (253)
T ss_pred Ceeee---ecceEEEcCCCEEEEECCCC---CCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeE
Confidence 44544 89999999999999997522 44444332 1 1344434443332 1123567999
Q ss_pred CCCCcccCCCCCHHHHHHHhHHhcCC--ChhHHHHHHHHHHHHcCCC----cccccccCcCChHHHHHHHHHHHHhCCCC
Q psy7365 377 CPQFDALNDRLTPREHLEFYSRVRNL--PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTAIALLGNTP 450 (601)
Q Consensus 377 v~Q~~~l~~~lTv~E~L~~~~~~~g~--~~~~~~~~~~~lLe~~~L~----~~~~~~~~~LSgGqkQRl~lA~AL~~~P~ 450 (601)
+||++.+++.+|+.||+.+.....+. +.....+++.++++.+++. +..++++.+||||||||++||+||+.+|+
T Consensus 90 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 169 (253)
T PRK14267 90 VFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLVIARALAMKPK 169 (253)
T ss_pred EecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999876544332 2334445678899999984 35688999999999999999999999999
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 451 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 451 lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++||||||+|||+.+++.++++|+++.+ ++|||++||+++++..+|||+++|++|+++..|+++++..
T Consensus 170 llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (253)
T PRK14267 170 ILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVFE 237 (253)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999865 6999999999999999999999999999999999998754
No 483
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=99.96 E-value=3.8e-29 Score=255.97 Aligned_cols=198 Identities=21% Similarity=0.324 Sum_probs=157.6
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cc---cccccccccccCC--------cccccccc
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NS---FARGYYLSLDMKS--------APQKSYIG 375 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~---~g~g~~igld~~~--------~~~~~~ig 375 (601)
++.++ +++++...-++.+++++... .|++++++ +. .|..++.|.+... ...++.++
T Consensus 16 ~~~il---~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~ 89 (262)
T PRK09984 16 QHQAL---HAVDLNIHHGEMVALLGPSG---SGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTG 89 (262)
T ss_pred CeEEE---ecceEEEcCCcEEEEECCCC---CCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheE
Confidence 44444 88999999999999997522 44444332 11 1333333333221 11245799
Q ss_pred cCCCCcccCCCCCHHHHHHHhHHh--------cCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhC
Q psy7365 376 YCPQFDALNDRLTPREHLEFYSRV--------RNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLG 447 (601)
Q Consensus 376 ~v~Q~~~l~~~lTv~E~L~~~~~~--------~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~ 447 (601)
|+||++.+++.+|+.||+.+.... .+......+.++.++++.+++.+..++++.+||||||||++||+||+.
T Consensus 90 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~ 169 (262)
T PRK09984 90 YIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQ 169 (262)
T ss_pred EEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHHHHHHHHHHHHHhc
Confidence 999999999999999999864320 111122344578899999999888899999999999999999999999
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHH
Q psy7365 448 NTPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 517 (601)
Q Consensus 448 ~P~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L 517 (601)
+|++|||||||+|||+.+++.++++|++++++ |+|||++|||++++..+|||+++|++|+++..|+++++
T Consensus 170 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 170 QAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF 240 (262)
T ss_pred CCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHh
Confidence 99999999999999999999999999999764 89999999999999999999999999999999999876
No 484
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=2.9e-29 Score=259.92 Aligned_cols=194 Identities=22% Similarity=0.274 Sum_probs=159.2
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------ccc---ccccccccccCC---cccccccccCCCCcc-cCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSF---ARGYYLSLDMKS---APQKSYIGYCPQFDA-LNDRL 387 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~---g~g~~igld~~~---~~~~~~ig~v~Q~~~-l~~~l 387 (601)
+++++-..-++.+++++... +|++++++ +.. |..++.+.+... ...++++||+||++. +++..
T Consensus 24 ~~v~l~i~~Ge~~~I~G~nG---aGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 24 NDISFSIPRGSWTALIGHNG---SGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred eeEEEEEcCCCEEEEECCCC---CcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 88888888999999997522 45554432 222 333333433322 123567999999974 67789
Q ss_pred CHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 388 TPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 388 Tv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
|++||+.|....++.+..+..+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++
T Consensus 101 tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~ 180 (282)
T PRK13640 101 TVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKE 180 (282)
T ss_pred CHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHH
Confidence 99999987655555555555677899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 468 FLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 468 ~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
.++++|+++.++ |+|||++||++++++ +|||+++|++|++++.|+++++..
T Consensus 181 ~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 181 QILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999765 999999999999995 799999999999999999998754
No 485
>KOG0065|consensus
Probab=99.96 E-value=2.4e-29 Score=292.35 Aligned_cols=146 Identities=27% Similarity=0.419 Sum_probs=131.1
Q ss_pred ccccccCCCCcccCCCCCHHHHHHHhHHhcC---CChhHHHHHHHHHHHHcCCCcccccccCc----CChHHHHHHHHHH
Q psy7365 371 KSYIGYCPQFDALNDRLTPREHLEFYSRVRN---LPSVLLNTIVNESLNKFALGHYSDREVRT----LSGGNKRKLSTAI 443 (601)
Q Consensus 371 ~~~ig~v~Q~~~l~~~lTv~E~L~~~~~~~g---~~~~~~~~~~~~lLe~~~L~~~~~~~~~~----LSgGqkQRl~lA~ 443 (601)
+|.+|||-|++...+.+||+|-|.|.+.++. .+.++..+.++++++.++|++++|.-++. ||..||+||.||.
T Consensus 863 ~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G~GLs~eQRKrLTIgV 942 (1391)
T KOG0065|consen 863 ARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPGSGLSTEQRKRLTIGV 942 (1391)
T ss_pred ccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCCCCCCHHHhceeeEEE
Confidence 3579999999988899999999999988763 34444457899999999999999988888 9999999999999
Q ss_pred HHhCCC-CEEEEECCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccChh-HHHhhCCEEEEEeC-CEEEEecCHHH
Q psy7365 444 ALLGNT-PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME-ECEALCTKLTIMVN-GQFTCLGSATH 516 (601)
Q Consensus 444 AL~~~P-~lLlLDEPTsGLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~-e~~~l~drv~iL~~-G~iv~~G~~~~ 516 (601)
-|+.+| .||+|||||||||..+...+.+.++++++.|.||+.|-|... .+.+.-||+++|++ |+.+..|++.+
T Consensus 943 ELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 943 ELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 999999 999999999999999999999999999999999999999986 66677899999975 78999999754
No 486
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=3.6e-29 Score=257.66 Aligned_cols=194 Identities=21% Similarity=0.295 Sum_probs=157.6
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCcc-cCCCCCHH
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFDA-LNDRLTPR 390 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~-l~~~lTv~ 390 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+... ...++.+||+||++. .++.+|++
T Consensus 26 ~~isl~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~ 102 (271)
T PRK13632 26 KNVSFEINEGEYVAILGHNG---SGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGATVE 102 (271)
T ss_pred eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcccHH
Confidence 88888888999999997522 45554432 223333333433322 123567999999974 67778999
Q ss_pred HHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHH
Q psy7365 391 EHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARRFLW 470 (601)
Q Consensus 391 E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~~i~ 470 (601)
||+.+.....+....+..+++.++++.++|.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.++
T Consensus 103 enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~ 182 (271)
T PRK13632 103 DDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIK 182 (271)
T ss_pred HHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH
Confidence 99988654444444445567889999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 471 TCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 471 ~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
++|++++++ ++|||++||+++++. +|||+++|++|+++..|+++++..
T Consensus 183 ~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 183 KIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHHhc
Confidence 999999776 599999999999996 799999999999999999988754
No 487
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=99.96 E-value=8e-29 Score=250.01 Aligned_cols=194 Identities=24% Similarity=0.279 Sum_probs=155.7
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccC--CcccccccccCC-CCcc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMK--SAPQKSYIGYCP-QFDA 382 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~--~~~~~~~ig~v~-Q~~~ 382 (601)
.+++++ +++++...-++.+++++... .|++++++ +..|..++.+.+.. ....++.++|+| |.+.
T Consensus 32 ~~~~il---~~vs~~i~~Ge~~~i~G~NG---sGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~ 105 (236)
T cd03267 32 REVEAL---KGISFTIEKGEIVGFIGPNG---AGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQ 105 (236)
T ss_pred CCeeee---eceeEEEcCCCEEEEECCCC---CCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccc
Confidence 344554 89999999999999997522 45554432 22333333232221 122356799998 5567
Q ss_pred cCCCCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCC
Q psy7365 383 LNDRLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMD 462 (601)
Q Consensus 383 l~~~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD 462 (601)
+++.+|++||+.+...+++....+..+++.++++.+++.+..++++.+||||||||++||+||+.+|+++||||||+|||
T Consensus 106 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 185 (236)
T cd03267 106 LWWDLPVIDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLD 185 (236)
T ss_pred cCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 88889999999887666665555555678889999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEec
Q psy7365 463 PGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 512 (601)
Q Consensus 463 ~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G 512 (601)
+.+++.+.++|++++++ |+|||++||+++++..+||++++|++|++++.|
T Consensus 186 ~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 186 VVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999765 899999999999999999999999999998764
No 488
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=99.96 E-value=3.2e-29 Score=267.49 Aligned_cols=207 Identities=25% Similarity=0.403 Sum_probs=167.0
Q ss_pred hhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-ch
Q psy7365 51 LFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-DM 123 (601)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~~ 123 (601)
.+|+++.. .++..++.++|+||++.+ +||||+ ||||| . |+|.|..+|++|.|++||.++.. +.
T Consensus 336 ~Ve~l~~~--PPg~~~pil~~isF~l~~G~~lgIIGPSgS--GKSTL-----a-R~lvG~w~p~~G~VRLDga~l~qWd~ 405 (580)
T COG4618 336 SVERLTAA--PPGQKKPILKGISFALQAGEALGIIGPSGS--GKSTL-----A-RLLVGIWPPTSGSVRLDGADLRQWDR 405 (580)
T ss_pred eEeeeeec--CCCCCCcceecceeEecCCceEEEECCCCc--cHHHH-----H-HHHHcccccCCCcEEecchhhhcCCH
Confidence 47888875 788889999999999998 999999 56665 4 69999999999999999999975 56
Q ss_pred HHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHH-----HHHHHHHHHcC--CCcccCCccccCChHHHhhhh
Q psy7365 124 TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQ-----LEISNMIGDLG--IPHKRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 124 ~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~g--l~~~~~~~~~~LSgG~~qr~~ 196 (601)
+.+.+.|||+||+-.+|+. ||.||++-+.+. .+.+..- ..+.+++-.+- -+-....--..||||||||++
T Consensus 406 e~lG~hiGYLPQdVeLF~G-TIaeNIaRf~~~--~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIa 482 (580)
T COG4618 406 EQLGRHIGYLPQDVELFDG-TIAENIARFGEE--ADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIA 482 (580)
T ss_pred HHhccccCcCcccceecCC-cHHHHHHhcccc--CCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHH
Confidence 7788999999999999975 999999865432 2333221 12445555543 223334455789999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+|||+|.|
T Consensus 483 LARAlYG~------------------------------------------------------------------------ 490 (580)
T COG4618 483 LARALYGD------------------------------------------------------------------------ 490 (580)
T ss_pred HHHHHcCC------------------------------------------------------------------------
Confidence 87776655
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSV 349 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~ 349 (601)
|.+++||||-|+||......+.+.|..+ +.+|.|+|++||+.+.+. .+|+|.+|.+|++...|...
T Consensus 491 -P~lvVLDEPNsNLD~~GE~AL~~Ai~~~-----k~rG~~vvviaHRPs~L~-~~Dkilvl~~G~~~~FG~r~ 556 (580)
T COG4618 491 -PFLVVLDEPNSNLDSEGEAALAAAILAA-----KARGGTVVVIAHRPSALA-SVDKILVLQDGRIAAFGPRE 556 (580)
T ss_pred -CcEEEecCCCCCcchhHHHHHHHHHHHH-----HHcCCEEEEEecCHHHHh-hcceeeeecCChHHhcCCHH
Confidence 4799999999999999999999999988 357999999999987665 89999999999998887653
No 489
>KOG0055|consensus
Probab=99.96 E-value=1.5e-29 Score=294.36 Aligned_cols=209 Identities=27% Similarity=0.375 Sum_probs=167.9
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
++++||++.|... .+.++++|+||++.+ .||||| ||| |+ ..+|-.++.|++|.|.+||.++++ +
T Consensus 988 I~~~~V~F~YPsR-P~~~Il~~l~l~i~~GqTvALVG~SGs--GKS-----Tv-I~LLeRfYdp~~G~V~IDg~dik~ln 1058 (1228)
T KOG0055|consen 988 IEFRNVSFAYPTR-PDVPVLNNLSLSIRAGQTVALVGPSGS--GKS-----TV-ISLLERFYDPDAGKVKIDGVDIKDLN 1058 (1228)
T ss_pred EEEeeeEeeCCCC-CCchhhcCCcEEecCCCEEEEECCCCC--CHH-----HH-HHHHHHhcCCCCCeEEECCcccccCC
Confidence 4599999996532 378899999999988 999999 455 44 579999999999999999999986 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHH-----HHHHHHHc--CCCcccCCccccCChHHHhhh
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLE-----ISNMIGDL--GIPHKRTSLANTLSGGMQRKL 195 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LSgG~~qr~ 195 (601)
...+|+.+|.|.|+|.|| +-|++||+.|+. ..++.+++.+. +.+.+..+ |.+-....+..+||||||||+
T Consensus 1059 l~~LR~~i~lVsQEP~LF-~~TIrENI~YG~--~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRI 1135 (1228)
T KOG0055|consen 1059 LKWLRKQIGLVSQEPVLF-NGTIRENIAYGS--EEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRI 1135 (1228)
T ss_pred HHHHHHhcceeccCchhh-cccHHHHHhccC--CCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHH
Confidence 677899999999999999 679999999982 22555544332 22222222 233334556679999999999
Q ss_pred hchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhcc
Q psy7365 196 DNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSF 275 (601)
Q Consensus 196 ~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 275 (601)
|||||++.|
T Consensus 1136 AIARAilRn----------------------------------------------------------------------- 1144 (1228)
T KOG0055|consen 1136 AIARAILRN----------------------------------------------------------------------- 1144 (1228)
T ss_pred HHHHHHHcC-----------------------------------------------------------------------
Confidence 866554333
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 276 VPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 276 ~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
|++|+|||-||+||.++.+.+.+.|.+. ..|+|.|++.|+++.+. -||.|+|+++|+++..|+-..
T Consensus 1145 --PkILLLDEATSALDseSErvVQeALd~a------~~gRT~IvIAHRLSTIq-naD~I~Vi~~G~VvE~GtH~~ 1210 (1228)
T KOG0055|consen 1145 --PKILLLDEATSALDSESERVVQEALDRA------MEGRTTIVIAHRLSTIQ-NADVIAVLKNGKVVEQGTHDE 1210 (1228)
T ss_pred --CCeeeeeccchhhhhhhHHHHHHHHHHh------hcCCcEEEEecchhhhh-cCCEEEEEECCEEEecccHHH
Confidence 5899999999999999999999999987 46899999999999886 799999999999999987543
No 490
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=99.96 E-value=5e-29 Score=255.69 Aligned_cols=200 Identities=20% Similarity=0.249 Sum_probs=158.6
Q ss_pred CCcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCC---cccccccccCCCCcc
Q psy7365 313 SGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKS---APQKSYIGYCPQFDA 382 (601)
Q Consensus 313 ~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~---~~~~~~ig~v~Q~~~ 382 (601)
.+++++ +++++...-++++++++... .|++++++ +..|...+.+.+... ...++.+||+||++.
T Consensus 18 ~~~~~l---~~isl~i~~Ge~~~i~G~nG---sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 91 (265)
T PRK10253 18 GKYTVA---ENLTVEIPDGHFTAIIGPNG---CGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRIGLLAQNAT 91 (265)
T ss_pred CCEEEe---eecceEECCCCEEEEECCCC---CCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhheEEeeccCc
Confidence 344544 89999999999999997522 45554432 222333333333221 122457999999999
Q ss_pred cCCCCCHHHHHHHhHH-hcC---CChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCC
Q psy7365 383 LNDRLTPREHLEFYSR-VRN---LPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPT 458 (601)
Q Consensus 383 l~~~lTv~E~L~~~~~-~~g---~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPT 458 (601)
+++.+|++||+.+... ..+ ...+...+++.++++.++|.+..++++.+||||||||++||+|++.+|+++||||||
T Consensus 92 ~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt 171 (265)
T PRK10253 92 TPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQETAIMLLDEPT 171 (265)
T ss_pred CCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 8888999999987421 111 112233456889999999998889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHH
Q psy7365 459 SGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 518 (601)
Q Consensus 459 sGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~ 518 (601)
+|||+.+++.++++|+++.++ |.|||++||+++++..+|||+++|++|+++..|+++++.
T Consensus 172 ~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 172 TWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999764 899999999999999999999999999999999998874
No 491
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=99.96 E-value=6.6e-29 Score=262.75 Aligned_cols=196 Identities=17% Similarity=0.175 Sum_probs=155.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-----------cccccccccccccCCcc-------cccccccCCCCcc-
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-----------NSFARGYYLSLDMKSAP-------QKSYIGYCPQFDA- 382 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-----------~~~g~g~~igld~~~~~-------~~~~ig~v~Q~~~- 382 (601)
+++++-..-++.+++++... +|++++++ ...|..++.+.++.... .++.|+|+||++.
T Consensus 24 ~~vsl~i~~Ge~~~ivG~sG---sGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~~ 100 (330)
T PRK15093 24 DRVSMTLTEGEIRGLVGESG---SGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQS 100 (330)
T ss_pred eeeEEEECCCCEEEEECCCC---CCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcch
Confidence 89999999999999997522 44444322 12233434444332211 1246999999975
Q ss_pred -cCCCCCHHHHHHHhHHhc---CC---ChhHHHHHHHHHHHHcCCCc---ccccccCcCChHHHHHHHHHHHHhCCCCEE
Q psy7365 383 -LNDRLTPREHLEFYSRVR---NL---PSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNTPLI 452 (601)
Q Consensus 383 -l~~~lTv~E~L~~~~~~~---g~---~~~~~~~~~~~lLe~~~L~~---~~~~~~~~LSgGqkQRl~lA~AL~~~P~lL 452 (601)
+++.+|+.+++.+....+ +. ...+.++++.++|+.++|.+ ..++++.+|||||||||+||+||+.+|++|
T Consensus 101 ~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~ll 180 (330)
T PRK15093 101 CLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQPRLL 180 (330)
T ss_pred hcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHCCCCEE
Confidence 678899999997543211 11 11234567889999999974 457899999999999999999999999999
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHH
Q psy7365 453 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 520 (601)
Q Consensus 453 lLDEPTsGLD~~~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~ 520 (601)
||||||+|||+.++.+++++|+++.++ |.|||++|||++++..+||||++|++|+|+..|+++++.+.
T Consensus 181 ilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g~~~~i~~~ 249 (330)
T PRK15093 181 IADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVETAPSKELVTT 249 (330)
T ss_pred EEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999875 99999999999999999999999999999999999988654
No 492
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=99.96 E-value=2.4e-29 Score=310.51 Aligned_cols=204 Identities=17% Similarity=0.206 Sum_probs=163.9
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.++||++.|.. ...++|+|+||++++ +||||| ||||| .++|.|+++|++|+|++||.|+.+ +
T Consensus 1285 I~f~nVsf~Y~~--~~~~vL~~is~~I~~GekiaIVGrTGs--GKSTL------~~lL~rl~~~~~G~I~IdG~dI~~i~ 1354 (1522)
T TIGR00957 1285 VEFRNYCLRYRE--DLDLVLRHINVTIHGGEKVGIVGRTGA--GKSSL------TLGLFRINESAEGEIIIDGLNIAKIG 1354 (1522)
T ss_pred EEEEEEEEEeCC--CCcccccceeEEEcCCCEEEEECCCCC--CHHHH------HHHHhcCccCCCCeEEECCEEccccC
Confidence 559999999853 234699999999988 999999 56654 569999999999999999999975 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCC-----------cccCCccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIP-----------HKRTSLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgG~ 191 (601)
...+|+++++|||+|.+|.. |++||+..+. ..+.+ ++.++++..++. .........|||||
T Consensus 1355 ~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~---~~sde----ei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQ 1426 (1522)
T TIGR00957 1355 LHDLRFKITIIPQDPVLFSG-SLRMNLDPFS---QYSDE----EVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQ 1426 (1522)
T ss_pred HHHHHhcCeEECCCCcccCc-cHHHHcCccc---CCCHH----HHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHH
Confidence 67789999999999999976 9999996321 23333 344556655543 23334446799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||+++|||++.+
T Consensus 1427 rQrl~LARALLr~------------------------------------------------------------------- 1439 (1522)
T TIGR00957 1427 RQLVCLARALLRK------------------------------------------------------------------- 1439 (1522)
T ss_pred HHHHHHHHHHHcC-------------------------------------------------------------------
Confidence 9999866543322
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCcccc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFL 351 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lL 351 (601)
|++||||||||+||+.+...+.+.|++. .+++|+|+++|+++.+. .||||++|++|+++..|++..+
T Consensus 1440 ------~~ILiLDEaTSalD~~Te~~Iq~~l~~~------~~~~TvI~IAHRl~ti~-~~DrIlVld~G~IvE~G~~~eL 1506 (1522)
T TIGR00957 1440 ------TKILVLDEATAAVDLETDNLIQSTIRTQ------FEDCTVLTIAHRLNTIM-DYTRVIVLDKGEVAEFGAPSNL 1506 (1522)
T ss_pred ------CCEEEEECCcccCCHHHHHHHHHHHHHH------cCCCEEEEEecCHHHHH-hCCEEEEEECCEEEEECCHHHH
Confidence 4899999999999999999999999875 35899999999998877 4899999999999998876543
No 493
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=99.96 E-value=4.2e-29 Score=256.47 Aligned_cols=207 Identities=18% Similarity=0.198 Sum_probs=163.3
Q ss_pred EecchhHHHhcCCEEEEecC---CccccccCc-cccc-c----ccccccccccccCCc------c-cccccccCCCCc--
Q psy7365 320 TTHYMDEADLLGDRIAIIAA---GKLQCCGSS-VFLK-N----SFARGYYLSLDMKSA------P-QKSYIGYCPQFD-- 381 (601)
Q Consensus 320 ~tHdl~~~~~l~Drv~vL~~---GkIv~~G~~-~lLk-~----~~g~g~~igld~~~~------~-~~~~ig~v~Q~~-- 381 (601)
+-+++++-..-++.+.+++. ||.+..... .++. . ..++..+.+.+.... . ..+.|+|+||++
T Consensus 20 av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~ 99 (316)
T COG0444 20 AVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQDPMT 99 (316)
T ss_pred EEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcCchh
Confidence 34899999999999999975 443211100 0111 1 112223333332211 1 235799999997
Q ss_pred ccCCCCCHHHHHHHhHHhcC-C-ChhHHHHHHHHHHHHcCCCc---ccccccCcCChHHHHHHHHHHHHhCCCCEEEEEC
Q psy7365 382 ALNDRLTPREHLEFYSRVRN-L-PSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDE 456 (601)
Q Consensus 382 ~l~~~lTv~E~L~~~~~~~g-~-~~~~~~~~~~~lLe~~~L~~---~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDE 456 (601)
+|.|-+|+.+.+.-....+. . .++++.+++.++|+.+++.+ ..+.+|.+|||||+|||.||.||+.+|++||.||
T Consensus 100 sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADE 179 (316)
T COG0444 100 SLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQRVMIAMALALNPKLLIADE 179 (316)
T ss_pred hcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCC
Confidence 58889999988876655443 3 35667889999999999975 5688999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHHHhCCceE
Q psy7365 457 PTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKYGQGYS 526 (601)
Q Consensus 457 PTsGLD~~~~~~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~~~~~~~~ 526 (601)
||++||...+.++.++|+++++ .|.|+|++|||+..+.++||||+||..|+|+..|+.+++.+...+.|+
T Consensus 180 PTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~~~~i~~~P~HPYT 250 (316)
T COG0444 180 PTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGPVEEIFKNPKHPYT 250 (316)
T ss_pred CcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCCHHHHhcCCCChHH
Confidence 9999999999999999999986 599999999999999999999999999999999999999877666553
No 494
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.96 E-value=4.6e-29 Score=259.14 Aligned_cols=195 Identities=22% Similarity=0.257 Sum_probs=155.6
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccC--------CcccccccccCCCCccc-CC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMK--------SAPQKSYIGYCPQFDAL-ND 385 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~--------~~~~~~~ig~v~Q~~~l-~~ 385 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+.. ....++.++|+||++.. +.
T Consensus 28 ~~is~~i~~Ge~~~l~G~nG---sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 104 (289)
T PRK13645 28 NNTSLTFKKNKVTCVIGTTG---SGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEYQLF 104 (289)
T ss_pred eeeEEEEeCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCceEEECCEEccccccccccHHHHhccEEEEEeCcchhhh
Confidence 88999999999999997522 45554432 23333333333321 11235679999999742 23
Q ss_pred CCCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCC-cccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHH
Q psy7365 386 RLTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPG 464 (601)
Q Consensus 386 ~lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~-~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~ 464 (601)
..|++||+.|.....+.......+++.++++.++|. +..++++.+||||||||++||+||+.+|++|||||||+|||+.
T Consensus 105 ~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~ 184 (289)
T PRK13645 105 QETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPK 184 (289)
T ss_pred hhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHH
Confidence 469999998765444444444456688899999994 6789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 465 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 465 ~~~~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
+++.++++|+++.++ |+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 185 ~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (289)
T PRK13645 185 GEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIFS 240 (289)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999998764 8999999999999999999999999999999999988754
No 495
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=99.96 E-value=7.2e-29 Score=248.48 Aligned_cols=186 Identities=23% Similarity=0.299 Sum_probs=150.0
Q ss_pred cchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcc-------cccccccCCCCcccCCCC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAP-------QKSYIGYCPQFDALNDRL 387 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~-------~~~~ig~v~Q~~~l~~~l 387 (601)
+++++...-++.+++++... .|++++++ +..|..++.+.+..... .++.++|+||++.+++.+
T Consensus 27 ~~~s~~i~~Ge~~~i~G~nG---sGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~~~~ 103 (228)
T PRK10584 27 TGVELVVKRGETIALIGESG---SGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLIPTL 103 (228)
T ss_pred eccEEEEcCCCEEEEECCCC---CCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccCCCc
Confidence 88888888999999997522 45554432 23333333333322111 125699999999999999
Q ss_pred CHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHHH
Q psy7365 388 TPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGARR 467 (601)
Q Consensus 388 Tv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~~ 467 (601)
|+.||+.+....++.+....++++.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++
T Consensus 104 tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~ 183 (228)
T PRK10584 104 NALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGD 183 (228)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Confidence 99999987654444444455667899999999998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEccChhHHHhhCCEEEEEeCCEEEEe
Q psy7365 468 FLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCL 511 (601)
Q Consensus 468 ~i~~lL~~l~~~-G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~ 511 (601)
.++++|++++++ |.|||++|||+++++. ||++++|++|+++..
T Consensus 184 ~l~~~l~~~~~~~~~tii~~sH~~~~~~~-~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 184 KIADLLFSLNREHGTTLILVTHDLQLAAR-CDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEECCEEEec
Confidence 999999999765 8999999999999865 999999999998753
No 496
>PTZ00243 ABC transporter; Provisional
Probab=99.96 E-value=2.1e-29 Score=310.70 Aligned_cols=204 Identities=22% Similarity=0.328 Sum_probs=164.5
Q ss_pred hhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccCCC-c
Q psy7365 50 SLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDIRT-D 122 (601)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~~~-~ 122 (601)
+.|+||+++|.. ....+|+|+||++.+ +|+||+ ||||| .++|.|+++|++|+|.+||.|+.. +
T Consensus 1309 I~f~nVsf~Y~~--~~~~vL~~vsf~I~~GekVaIVGrTGS--GKSTL------l~lLlrl~~p~~G~I~IDG~di~~i~ 1378 (1560)
T PTZ00243 1309 LVFEGVQMRYRE--GLPLVLRGVSFRIAPREKVGIVGRTGS--GKSTL------LLTFMRMVEVCGGEIRVNGREIGAYG 1378 (1560)
T ss_pred EEEEEEEEEeCC--CCCceeecceEEECCCCEEEEECCCCC--CHHHH------HHHHhCCCCCCCcEEEECCEEcccCC
Confidence 559999999853 234599999999988 999999 56655 569999999999999999999975 5
Q ss_pred hHHhcccEEEEccCCCCCCCCCHHHHHHHhHhhcCCChHHHHHHHHHHHHHcCCCccc-------C----CccccCChHH
Q psy7365 123 MTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIGDLGIPHKR-------T----SLANTLSGGM 191 (601)
Q Consensus 123 ~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~----~~~~~LSgG~ 191 (601)
...+|+.+|+|||+|.+|.. |++|||..+. ..+. +++.++++..|+.+.. + .....|||||
T Consensus 1379 l~~LR~~I~iVpQdp~LF~g-TIreNIdp~~---~~sd----eeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQ 1450 (1560)
T PTZ00243 1379 LRELRRQFSMIPQDPVLFDG-TVRQNVDPFL---EASS----AEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQ 1450 (1560)
T ss_pred HHHHHhcceEECCCCccccc-cHHHHhCccc---CCCH----HHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHH
Confidence 66789999999999999965 9999996432 2232 3466777777765432 2 3346799999
Q ss_pred HhhhhchhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHH
Q psy7365 192 QRKLDNVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLF 271 (601)
Q Consensus 192 ~qr~~~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 271 (601)
|||++||||+++ +
T Consensus 1451 rQrLaLARALL~--------------------------------------~----------------------------- 1463 (1560)
T PTZ00243 1451 RQLMCMARALLK--------------------------------------K----------------------------- 1463 (1560)
T ss_pred HHHHHHHHHHhc--------------------------------------C-----------------------------
Confidence 999986554332 1
Q ss_pred hhccCCCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccccccCccc
Q psy7365 272 AMSFVPASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVF 350 (601)
Q Consensus 272 ~~~~~~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~l 350 (601)
+|++||||||||+||+.+.+.+.+.|++. ..++|+|+|+|+++.+. .||+|++|++|+++..|++..
T Consensus 1464 -----~~~ILlLDEATSaLD~~te~~Iq~~L~~~------~~~~TvI~IAHRl~ti~-~~DrIlVLd~G~VvE~Gt~~e 1530 (1560)
T PTZ00243 1464 -----GSGFILMDEATANIDPALDRQIQATVMSA------FSAYTVITIAHRLHTVA-QYDKIIVMDHGAVAEMGSPRE 1530 (1560)
T ss_pred -----CCCEEEEeCCCccCCHHHHHHHHHHHHHH------CCCCEEEEEeccHHHHH-hCCEEEEEECCEEEEECCHHH
Confidence 14899999999999999999999999875 35799999999998775 699999999999998887644
No 497
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=99.96 E-value=7.5e-29 Score=252.31 Aligned_cols=193 Identities=21% Similarity=0.259 Sum_probs=154.1
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccccc------------ccccccccccccCC-----cccccccccCCCCcccC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLKN------------SFARGYYLSLDMKS-----APQKSYIGYCPQFDALN 384 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~------------~~g~g~~igld~~~-----~~~~~~ig~v~Q~~~l~ 384 (601)
+++++...-++.+++++... .|++++++. ..|..++.+.+... ...++.++|+||++.++
T Consensus 23 ~~is~~i~~Ge~~~i~G~nG---sGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 23 HDISLEFEQNQVTALIGPSG---CGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred cceeEEEeCCCEEEEECCCC---CCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 88999889999999997522 455543321 12333333333321 12356799999999888
Q ss_pred CCCCHHHHHHHhHHhcCCC-hhHHHHHHHHHHHHcCCCc----ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 385 DRLTPREHLEFYSRVRNLP-SVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~-~~~~~~~~~~lLe~~~L~~----~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
+ .|+.||+.+....++.. .+...+++.++++.+++.+ ..++++.+||||||||++||+||+.+|++|||||||+
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~ 178 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIARALAVEPEVLLMDEPAS 178 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 7 59999998865544432 2334567888999999853 4678899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||+.++..++++|+++. +|+|||++|||++++..+|||+++|++|+++..|+++++.+
T Consensus 179 ~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 237 (253)
T PRK14242 179 ALDPIATQKIEELIHELK-ARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFT 237 (253)
T ss_pred cCCHHHHHHHHHHHHHHh-cCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 999999999999999985 47999999999999999999999999999999999988754
No 498
>PLN03073 ABC transporter F family; Provisional
Probab=99.96 E-value=8.1e-29 Score=285.07 Aligned_cols=190 Identities=22% Similarity=0.327 Sum_probs=150.3
Q ss_pred cchhhhhcccccccccCCCccceeecceEEeec------ccCCCCCCCccccchhhhHHHhccCCCCCCeeEEEEccccC
Q psy7365 46 GAYVSLFESLSENRDKLGIDSYGISDTSLEEQP------LGPSGITLGLHTLGLEFVSRSMLMGMLPVSSGTAKIYDHDI 119 (601)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~g~~~g~~~~g~~~~~~~~l~Gl~~~~~G~v~~~g~~~ 119 (601)
+.++..+++|++.|+. ..++++|+||++.+ +||||| ||||| .++|+|+++|++|+|.+++
T Consensus 505 ~~~~L~~~~ls~~y~~---~~~il~~vsl~i~~Ge~i~LvG~NGs--GKSTL------Lk~L~Gll~p~~G~I~~~~--- 570 (718)
T PLN03073 505 GPPIISFSDASFGYPG---GPLLFKNLNFGIDLDSRIAMVGPNGI--GKSTI------LKLISGELQPSSGTVFRSA--- 570 (718)
T ss_pred CCceEEEEeeEEEeCC---CCeeEeccEEEEcCCCEEEEECCCCC--cHHHH------HHHHhCCCCCCCceEEECC---
Confidence 3456679999999842 23589999999987 999999 56665 6799999999999999865
Q ss_pred CCchHHhcccEEEEccCCCCCCCCCHHHHHHHhH-hhc-CCChHHHHHHHHHHHHHcCCCc-ccCCccccCChHHHhhhh
Q psy7365 120 RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYS-QLK-QVPKDLAQLEISNMIGDLGIPH-KRTSLANTLSGGMQRKLD 196 (601)
Q Consensus 120 ~~~~~~~~~~ig~v~Q~~~~~~~~tv~e~l~~~~-~~~-~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qr~~ 196 (601)
+.++||+||++ +..+++.++..+.. ..+ +.+ .+++.++++.+|+.. ..++++.+||||||||++
T Consensus 571 -------~~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~~~~----~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqRva 637 (718)
T PLN03073 571 -------KVRMAVFSQHH--VDGLDLSSNPLLYMMRCFPGVP----EQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVA 637 (718)
T ss_pred -------ceeEEEEeccc--cccCCcchhHHHHHHHhcCCCC----HHHHHHHHHHCCCChHHhcCCccccCHHHHHHHH
Confidence 24699999986 23455666643321 111 222 356788999999984 678999999999999998
Q ss_pred chhhhcchhhHHHHHHHhhhhhhhhHhhcCCCCCCcchhhHHhhcCCcchhhHHHHHHHHhhhcchhHHHHHHHHhhccC
Q psy7365 197 NVKVWFNNKAWIAAVSFMNAANNVILRASLPSNVSRDDYAIVAINHPMNLTHKQMALETLKKAGTSILVAVTVLFAMSFV 276 (601)
Q Consensus 197 ~~~~~~~~~~~~a~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 276 (601)
+||++ +.+
T Consensus 638 LAraL--------------------------------------~~~---------------------------------- 645 (718)
T PLN03073 638 FAKIT--------------------------------------FKK---------------------------------- 645 (718)
T ss_pred HHHHH--------------------------------------hcC----------------------------------
Confidence 54432 222
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHHHHHHhhhccccCCcEEEEEecchhHHHhcCCEEEEecCCccc
Q psy7365 277 PASTVILDEPTSGVDPYSRRSIWELLIKVYYASHSLSGRTVILTTHYMDEADLLGDRIAIIAAGKLQ 343 (601)
Q Consensus 277 ~~~~liLDEPtsgLD~~~~~~l~~~l~~l~~~~~~~~G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv 343 (601)
|++|||||||+|||+.++..+.+.|.+. .| |||++|||++++..+||++++|.+|+++
T Consensus 646 -p~lLLLDEPT~~LD~~s~~~l~~~L~~~-------~g-tvIivSHd~~~i~~~~drv~~l~~G~i~ 703 (718)
T PLN03073 646 -PHILLLDEPSNHLDLDAVEALIQGLVLF-------QG-GVLMVSHDEHLISGSVDELWVVSEGKVT 703 (718)
T ss_pred -CCEEEEcCCCCCCCHHHHHHHHHHHHHc-------CC-EEEEEECCHHHHHHhCCEEEEEECCEEE
Confidence 5899999999999999999988887653 34 9999999999999999999999999986
No 499
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=99.96 E-value=5.5e-29 Score=254.57 Aligned_cols=188 Identities=21% Similarity=0.257 Sum_probs=151.9
Q ss_pred CcEEEEEecchhHHHhcCCEEEEecCCccccccCccccc-------cccccccccccccCCcccccccccCCCCcccCCC
Q psy7365 314 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLK-------NSFARGYYLSLDMKSAPQKSYIGYCPQFDALNDR 386 (601)
Q Consensus 314 G~TVI~~tHdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk-------~~~g~g~~igld~~~~~~~~~ig~v~Q~~~l~~~ 386 (601)
++.++ +++++...-++.+++++... +|++++++ +..|+.++.+.+. ...++.++|+||++.+++.
T Consensus 24 ~~~il---~~isl~i~~Ge~~~I~G~NG---sGKSTLlk~l~Gl~~p~~G~i~~~g~~~--~~~~~~i~~v~q~~~l~~~ 95 (257)
T PRK11247 24 ERTVL---NQLDLHIPAGQFVAVVGRSG---CGKSTLLRLLAGLETPSAGELLAGTAPL--AEAREDTRLMFQDARLLPW 95 (257)
T ss_pred Cccee---eeeEEEEcCCCEEEEECCCC---CCHHHHHHHHhcCCCCCCeEEEECCEEH--HHhhCceEEEecCccCCCC
Confidence 44444 88888888899999997522 55555443 2223322212111 1235679999999999998
Q ss_pred CCHHHHHHHhHHhcCCChhHHHHHHHHHHHHcCCCcccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCCCCCHHHH
Q psy7365 387 LTPREHLEFYSRVRNLPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTSGMDPGAR 466 (601)
Q Consensus 387 lTv~E~L~~~~~~~g~~~~~~~~~~~~lLe~~~L~~~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTsGLD~~~~ 466 (601)
+|++||+.+.. +. ...+++.++++.++|.+..++++.+||||||||++||+||+.+|+++||||||+|||+.++
T Consensus 96 ~tv~enl~~~~--~~----~~~~~~~~~l~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~ 169 (257)
T PRK11247 96 KKVIDNVGLGL--KG----QWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTR 169 (257)
T ss_pred CcHHHHHHhcc--cc----hHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHH
Confidence 99999998742 11 1235678899999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHH
Q psy7365 467 RFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSAT 515 (601)
Q Consensus 467 ~~i~~lL~~l~~-~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~ 515 (601)
..++++|+++.+ .|+|||++|||++++..+|||+++|++|+++..|+.+
T Consensus 170 ~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 170 IEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999865 4899999999999999999999999999999988764
No 500
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.96 E-value=1.2e-28 Score=250.61 Aligned_cols=193 Identities=19% Similarity=0.236 Sum_probs=154.3
Q ss_pred cchhHHHhcCCEEEEecCCccccccCcccccc------------ccccccccccccCC-----cccccccccCCCCcccC
Q psy7365 322 HYMDEADLLGDRIAIIAAGKLQCCGSSVFLKN------------SFARGYYLSLDMKS-----APQKSYIGYCPQFDALN 384 (601)
Q Consensus 322 Hdl~~~~~l~Drv~vL~~GkIv~~G~~~lLk~------------~~g~g~~igld~~~-----~~~~~~ig~v~Q~~~l~ 384 (601)
+++++...-++.+++++... .|++++++. ..|...+.+.+... ...++.++|+||++.++
T Consensus 20 ~~vs~~i~~Ge~~~i~G~nG---sGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (250)
T PRK14245 20 KGISMEIEEKSVVAFIGPSG---CGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNPF 96 (250)
T ss_pred eeeeEEEeCCCEEEEECCCC---CCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCccC
Confidence 88888889999999998522 444443321 12333333433321 12356799999998888
Q ss_pred CCCCHHHHHHHhHHhcCCCh-hHHHHHHHHHHHHcCCCc----ccccccCcCChHHHHHHHHHHHHhCCCCEEEEECCCC
Q psy7365 385 DRLTPREHLEFYSRVRNLPS-VLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLSTAIALLGNTPLIFLDEPTS 459 (601)
Q Consensus 385 ~~lTv~E~L~~~~~~~g~~~-~~~~~~~~~lLe~~~L~~----~~~~~~~~LSgGqkQRl~lA~AL~~~P~lLlLDEPTs 459 (601)
+ .|+.||+.+....++... ....+.+.++++.+++.+ ..++++.+||||||||++||+||+.+|+++||||||+
T Consensus 97 ~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~ 175 (250)
T PRK14245 97 P-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIARAMAVSPSVLLMDEPAS 175 (250)
T ss_pred c-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 6 699999987655444322 234466888999999853 4678899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCcEEEEEccChhHHHhhCCEEEEEeCCEEEEecCHHHHHH
Q psy7365 460 GMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 519 (601)
Q Consensus 460 GLD~~~~~~i~~lL~~l~~~G~tVllsTHdl~e~~~l~drv~iL~~G~iv~~G~~~~L~~ 519 (601)
|||+.++..++++|+++. +|+|||++||+++++..+|||+++|++|+++..|+++++.+
T Consensus 176 ~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 176 ALDPISTAKVEELIHELK-KDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred cCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999985 57999999999999999999999999999999999998864
Done!