Query psy7366
Match_columns 566
No_of_seqs 370 out of 2827
Neff 8.0
Searched_HMMs 46136
Date Sat Aug 17 00:53:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7366.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7366hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1123 ATPase components of v 100.0 3.7E-79 7.9E-84 645.4 46.1 437 1-564 46-517 (539)
2 PRK10261 glutathione transport 100.0 6.2E-78 1.3E-82 672.8 47.5 456 1-564 53-551 (623)
3 PRK13549 xylose transporter AT 100.0 8.1E-78 1.7E-82 658.9 42.4 427 1-564 42-492 (506)
4 TIGR03269 met_CoM_red_A2 methy 100.0 2.2E-77 4.7E-82 657.9 46.0 390 32-564 109-515 (520)
5 PRK15134 microcin C ABC transp 100.0 1E-76 2.2E-81 653.5 46.2 429 1-564 46-513 (529)
6 PRK09700 D-allose transporter 100.0 4.7E-77 1E-81 653.7 41.6 423 1-561 42-493 (510)
7 PRK10762 D-ribose transporter 100.0 2E-76 4.2E-81 647.2 42.6 419 1-564 41-482 (501)
8 TIGR02633 xylG D-xylose ABC tr 100.0 1.9E-76 4E-81 647.7 41.5 427 1-564 38-490 (500)
9 PRK15439 autoinducer 2 ABC tra 100.0 3.5E-75 7.6E-80 637.9 45.7 427 1-564 48-490 (510)
10 PRK11288 araG L-arabinose tran 100.0 3.8E-75 8.2E-80 637.0 43.8 421 1-564 41-483 (501)
11 PRK10982 galactose/methyl gala 100.0 5E-75 1.1E-79 634.8 42.2 421 1-563 35-477 (491)
12 COG4172 ABC-type uncharacteriz 100.0 4.6E-73 1E-77 565.8 41.1 429 1-564 47-514 (534)
13 PRK10938 putative molybdenum t 100.0 2.4E-72 5.1E-77 613.8 39.8 420 1-559 40-485 (490)
14 COG1129 MglA ABC-type sugar tr 100.0 2.5E-71 5.3E-76 582.4 40.2 419 1-563 45-487 (500)
15 PRK15064 ABC transporter ATP-b 100.0 6.9E-70 1.5E-74 599.4 47.4 447 1-564 38-523 (530)
16 PRK11819 putative ABC transpor 100.0 9.4E-70 2E-74 600.6 44.8 447 1-564 44-531 (556)
17 TIGR01257 rim_protein retinal- 100.0 7.8E-69 1.7E-73 640.9 55.8 243 321-565 1916-2158(2272)
18 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.4E-69 9.6E-74 595.2 44.7 446 1-563 42-528 (552)
19 PRK10636 putative ABC transpor 100.0 5.5E-68 1.2E-72 593.2 39.4 444 1-564 38-515 (638)
20 PRK13409 putative ATPase RIL; 100.0 9.2E-68 2E-72 583.6 39.4 405 1-561 110-537 (590)
21 COG3845 ABC-type uncharacteriz 100.0 3.9E-67 8.4E-72 539.3 37.1 424 1-564 41-490 (501)
22 PRK11147 ABC transporter ATPas 100.0 7.6E-66 1.6E-70 577.1 48.2 441 1-558 40-519 (635)
23 COG0488 Uup ATPase components 100.0 3.4E-67 7.3E-72 565.1 30.7 449 1-563 40-522 (530)
24 KOG0055|consensus 100.0 6.8E-66 1.5E-70 579.7 40.1 214 342-565 987-1212(1228)
25 PLN03073 ABC transporter F fam 100.0 1.9E-63 4.2E-68 558.5 50.0 388 66-564 319-712 (718)
26 TIGR00956 3a01205 Pleiotropic 100.0 1.5E-60 3.2E-65 569.8 51.0 218 342-562 759-989 (1394)
27 PLN03232 ABC transporter C fam 100.0 8.1E-61 1.7E-65 577.3 39.7 212 342-565 1234-1457(1495)
28 PLN03130 ABC transporter C fam 100.0 2.1E-60 4.6E-65 573.9 41.0 212 342-565 1237-1460(1622)
29 PTZ00265 multidrug resistance 100.0 2.1E-60 4.5E-65 569.1 38.0 215 342-565 1165-1451(1466)
30 COG1126 GlnQ ABC-type polar am 100.0 1.4E-60 3.1E-65 443.5 24.5 219 342-564 2-223 (240)
31 PLN03140 ABC transporter G fam 100.0 2E-58 4.3E-63 549.7 47.8 219 342-562 867-1106(1470)
32 PTZ00243 ABC transporter; Prov 100.0 5.6E-58 1.2E-62 552.2 47.4 212 342-565 1308-1532(1560)
33 TIGR00957 MRP_assoc_pro multi 100.0 1.3E-58 2.9E-63 558.8 40.2 212 342-565 1284-1507(1522)
34 TIGR01271 CFTR_protein cystic 100.0 6.3E-56 1.4E-60 534.1 47.4 211 342-565 1217-1439(1490)
35 COG1125 OpuBA ABC-type proline 100.0 5.3E-57 1.1E-61 427.6 21.4 220 342-565 1-224 (309)
36 COG1135 AbcC ABC-type metal io 100.0 1.6E-56 3.5E-61 436.7 23.3 223 342-564 1-229 (339)
37 KOG0054|consensus 100.0 1.8E-54 3.9E-59 498.2 36.4 217 337-565 1133-1361(1381)
38 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-54 2.3E-59 410.3 23.2 222 340-565 6-234 (263)
39 COG1120 FepC ABC-type cobalami 100.0 2.2E-54 4.7E-59 422.1 23.7 220 342-565 2-227 (258)
40 COG4555 NatA ABC-type Na+ tran 100.0 6.7E-55 1.5E-59 399.8 16.9 221 342-565 1-221 (245)
41 COG1116 TauB ABC-type nitrate/ 100.0 8.5E-54 1.8E-58 410.1 24.2 207 342-556 3-212 (248)
42 COG3842 PotA ABC-type spermidi 100.0 1.6E-53 3.5E-58 433.5 22.1 220 341-565 4-225 (352)
43 COG3839 MalK ABC-type sugar tr 100.0 5.5E-53 1.2E-57 427.5 24.5 219 342-565 3-222 (338)
44 COG1136 SalX ABC-type antimicr 100.0 2.2E-52 4.8E-57 400.4 26.3 214 342-556 1-221 (226)
45 COG1131 CcmA ABC-type multidru 100.0 1.9E-52 4.1E-57 425.0 26.6 221 342-565 4-225 (293)
46 COG3638 ABC-type phosphate/pho 100.0 7.5E-53 1.6E-57 396.7 21.8 221 342-565 3-236 (258)
47 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.1E-52 4.6E-57 406.0 24.8 218 341-565 3-226 (254)
48 PRK13537 nodulation ABC transp 100.0 6E-52 1.3E-56 424.9 28.7 221 341-565 6-226 (306)
49 KOG0927|consensus 100.0 1.5E-52 3.3E-57 432.7 24.3 388 65-560 195-590 (614)
50 COG2884 FtsE Predicted ATPase 100.0 1.5E-52 3.4E-57 381.2 20.8 217 342-561 1-221 (223)
51 PRK00349 uvrA excinuclease ABC 100.0 9.5E-51 2.1E-55 462.1 37.9 369 44-565 434-926 (943)
52 COG1124 DppF ABC-type dipeptid 100.0 1E-51 2.2E-56 392.0 22.8 222 342-565 3-230 (252)
53 COG1118 CysA ABC-type sulfate/ 100.0 3.7E-52 8E-57 405.0 20.2 219 342-564 2-225 (345)
54 TIGR02314 ABC_MetN D-methionin 100.0 3.5E-51 7.6E-56 423.1 28.4 223 342-564 1-228 (343)
55 COG1137 YhbG ABC-type (unclass 100.0 1.4E-52 3E-57 384.2 14.9 220 342-565 4-227 (243)
56 PRK13536 nodulation factor exp 100.0 5.6E-51 1.2E-55 422.2 28.7 221 341-565 40-260 (340)
57 KOG0062|consensus 100.0 1.8E-51 3.9E-56 422.6 23.5 376 71-558 178-560 (582)
58 PRK11650 ugpC glycerol-3-phosp 100.0 2.2E-50 4.8E-55 420.3 28.0 219 342-564 3-222 (356)
59 COG1122 CbiO ABC-type cobalt t 100.0 1.3E-50 2.8E-55 395.4 24.4 220 342-564 3-226 (235)
60 COG4152 ABC-type uncharacteriz 100.0 2.3E-51 4.9E-56 386.8 18.3 217 342-565 2-218 (300)
61 cd03265 ABC_DrrA DrrA is the A 100.0 3.4E-50 7.4E-55 393.9 26.7 219 343-565 1-220 (220)
62 PRK11432 fbpC ferric transport 100.0 3.7E-50 8E-55 417.5 28.1 219 341-564 5-224 (351)
63 TIGR03265 PhnT2 putative 2-ami 100.0 3.7E-50 8E-55 418.2 28.1 219 342-565 4-223 (353)
64 TIGR01288 nodI ATP-binding ABC 100.0 4.7E-50 1E-54 411.2 28.2 220 341-564 3-222 (303)
65 cd03261 ABC_Org_Solvent_Resist 100.0 5.2E-50 1.1E-54 396.6 27.0 218 343-564 1-224 (235)
66 COG1117 PstB ABC-type phosphat 100.0 1.1E-50 2.3E-55 375.7 19.3 218 341-564 6-235 (253)
67 TIGR03258 PhnT 2-aminoethylpho 100.0 7.8E-50 1.7E-54 416.4 27.7 219 342-565 5-227 (362)
68 COG0411 LivG ABC-type branched 100.0 1.7E-50 3.7E-55 384.1 19.7 221 341-565 3-238 (250)
69 PRK00635 excinuclease ABC subu 100.0 1.8E-48 4E-53 459.4 41.4 373 45-565 425-905 (1809)
70 TIGR03522 GldA_ABC_ATP gliding 100.0 1.5E-49 3.3E-54 406.9 27.4 218 342-564 2-219 (301)
71 TIGR01188 drrA daunorubicin re 100.0 1.1E-49 2.3E-54 408.3 25.5 208 358-565 5-212 (302)
72 PRK11153 metN DL-methionine tr 100.0 2.5E-49 5.5E-54 411.6 28.3 223 342-564 1-228 (343)
73 PRK09452 potA putrescine/sperm 100.0 2.7E-49 5.9E-54 413.7 28.6 219 341-564 13-232 (375)
74 TIGR00630 uvra excinuclease AB 100.0 1.9E-48 4.2E-53 442.4 37.9 367 45-564 433-923 (924)
75 cd03259 ABC_Carb_Solutes_like 100.0 2E-49 4.4E-54 386.5 25.4 212 343-559 1-213 (213)
76 cd03266 ABC_NatA_sodium_export 100.0 3.1E-49 6.6E-54 386.6 26.4 218 342-559 1-218 (218)
77 PRK10851 sulfate/thiosulfate t 100.0 3.1E-49 6.8E-54 411.2 27.6 218 342-564 2-224 (353)
78 TIGR00960 3a0501s02 Type II (G 100.0 2.7E-49 5.8E-54 386.5 25.3 212 342-555 1-216 (216)
79 PRK11000 maltose/maltodextrin 100.0 5.1E-49 1.1E-53 412.6 28.0 218 342-564 3-221 (369)
80 PRK11607 potG putrescine trans 100.0 5.6E-49 1.2E-53 412.0 28.2 219 341-564 18-237 (377)
81 cd03263 ABC_subfamily_A The AB 100.0 5.7E-49 1.2E-53 385.3 26.0 220 343-565 1-220 (220)
82 cd03296 ABC_CysA_sulfate_impor 100.0 6.8E-49 1.5E-53 389.6 26.5 218 342-564 2-224 (239)
83 cd03219 ABC_Mj1267_LivG_branch 100.0 6.6E-49 1.4E-53 389.0 26.3 219 343-565 1-231 (236)
84 cd03258 ABC_MetN_methionine_tr 100.0 8.3E-49 1.8E-53 387.5 26.3 223 342-564 1-228 (233)
85 COG4175 ProV ABC-type proline/ 100.0 1.1E-49 2.4E-54 388.0 19.6 224 342-565 4-253 (386)
86 PRK09536 btuD corrinoid ABC tr 100.0 8.3E-49 1.8E-53 412.4 27.8 219 342-564 3-226 (402)
87 cd03218 ABC_YhbG The ABC trans 100.0 9.6E-49 2.1E-53 386.8 26.3 218 343-564 1-220 (232)
88 TIGR01186 proV glycine betaine 100.0 7E-49 1.5E-53 408.2 26.0 207 358-564 5-217 (363)
89 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.4E-48 3E-53 382.6 26.5 216 343-562 1-219 (220)
90 cd03269 ABC_putative_ATPase Th 100.0 1.9E-48 4.1E-53 378.9 26.1 210 343-559 1-210 (210)
91 cd03301 ABC_MalK_N The N-termi 100.0 1.7E-48 3.7E-53 380.0 25.7 212 343-559 1-213 (213)
92 PRK13637 cbiO cobalt transport 100.0 2.6E-48 5.5E-53 395.2 28.0 223 342-564 2-232 (287)
93 PRK13647 cbiO cobalt transport 100.0 2.8E-48 6.2E-53 392.4 27.8 220 342-564 4-225 (274)
94 PRK09493 glnQ glutamine ABC tr 100.0 3.1E-48 6.7E-53 385.2 27.1 219 342-564 1-223 (240)
95 cd03268 ABC_BcrA_bacitracin_re 100.0 2.1E-48 4.6E-53 377.9 25.4 208 343-559 1-208 (208)
96 PRK15079 oligopeptide ABC tran 100.0 4E-48 8.7E-53 399.8 28.6 225 340-564 6-249 (331)
97 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.3E-48 7.1E-53 385.4 26.8 219 343-564 1-223 (242)
98 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.9E-48 4E-53 381.1 24.7 212 343-555 1-218 (218)
99 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.4E-48 7.5E-53 383.8 26.5 218 342-564 1-219 (236)
100 cd03256 ABC_PhnC_transporter A 100.0 2.8E-48 6.1E-53 385.7 25.9 219 343-564 1-232 (241)
101 cd03260 ABC_PstB_phosphate_tra 100.0 3.2E-48 7E-53 381.8 26.0 216 343-564 1-227 (227)
102 PRK13643 cbiO cobalt transport 100.0 4.8E-48 1E-52 393.3 28.1 222 342-564 1-231 (288)
103 cd03264 ABC_drug_resistance_li 100.0 3.4E-48 7.4E-53 377.3 25.5 211 343-559 1-211 (211)
104 PRK13651 cobalt transporter AT 100.0 4.8E-48 1E-52 395.4 27.8 223 342-564 2-252 (305)
105 PRK11831 putative ABC transpor 100.0 5.3E-48 1.1E-52 389.7 27.6 220 341-564 6-231 (269)
106 TIGR02673 FtsE cell division A 100.0 3.5E-48 7.5E-53 378.1 25.3 210 342-554 1-214 (214)
107 PRK11264 putative amino-acid A 100.0 5.7E-48 1.2E-52 385.6 27.3 219 342-564 3-231 (250)
108 PRK11629 lolD lipoprotein tran 100.0 1.1E-47 2.3E-52 379.5 28.8 220 341-561 4-229 (233)
109 cd03224 ABC_TM1139_LivF_branch 100.0 3.9E-48 8.4E-53 379.9 25.3 217 343-565 1-220 (222)
110 PRK10070 glycine betaine trans 100.0 5.5E-48 1.2E-52 405.9 28.0 223 342-564 4-252 (400)
111 PRK10908 cell division protein 100.0 8.2E-48 1.8E-52 377.6 26.9 213 342-557 1-217 (222)
112 PRK13634 cbiO cobalt transport 100.0 7.6E-48 1.6E-52 392.3 27.5 221 343-564 3-233 (290)
113 PRK13641 cbiO cobalt transport 100.0 9.5E-48 2.1E-52 391.2 28.1 222 342-564 2-232 (287)
114 COG3840 ThiQ ABC-type thiamine 100.0 1.2E-48 2.7E-53 352.9 18.9 215 343-564 2-217 (231)
115 COG0410 LivF ABC-type branched 100.0 3.5E-48 7.7E-53 365.5 22.8 220 341-565 2-225 (237)
116 COG1245 Predicted ATPase, RNas 100.0 1.1E-47 2.4E-52 388.8 27.4 337 70-551 193-530 (591)
117 TIGR03415 ABC_choXWV_ATP choli 100.0 1E-47 2.2E-52 401.2 28.1 207 358-564 36-252 (382)
118 PRK13631 cbiO cobalt transport 100.0 1.3E-47 2.9E-52 394.5 28.4 224 340-564 19-263 (320)
119 PRK10895 lipopolysaccharide AB 100.0 9.5E-48 2.1E-52 381.9 26.0 219 342-564 3-224 (241)
120 cd03292 ABC_FtsE_transporter F 100.0 9.9E-48 2.1E-52 374.9 25.6 210 343-555 1-214 (214)
121 PRK13548 hmuV hemin importer A 100.0 1.5E-47 3.3E-52 384.0 27.5 219 342-564 2-228 (258)
122 PRK13650 cbiO cobalt transport 100.0 1.1E-47 2.3E-52 389.2 26.6 221 342-564 4-227 (279)
123 TIGR03411 urea_trans_UrtD urea 100.0 1.7E-47 3.7E-52 380.3 27.3 218 342-564 2-229 (242)
124 TIGR02315 ABC_phnC phosphonate 100.0 6.6E-48 1.4E-52 383.5 24.3 220 342-564 1-233 (243)
125 cd03225 ABC_cobalt_CbiO_domain 100.0 8E-48 1.7E-52 374.7 24.4 208 345-554 2-211 (211)
126 TIGR00972 3a0107s01c2 phosphat 100.0 2E-47 4.3E-52 381.0 27.4 217 342-564 1-230 (247)
127 PRK10619 histidine/lysine/argi 100.0 2.6E-47 5.7E-52 382.3 28.3 220 341-564 4-239 (257)
128 PRK11248 tauB taurine transpor 100.0 2.5E-47 5.4E-52 381.5 28.0 212 342-561 1-215 (255)
129 PRK13638 cbiO cobalt transport 100.0 1.4E-47 3.1E-52 387.0 26.5 219 342-564 1-223 (271)
130 cd03226 ABC_cobalt_CbiO_domain 100.0 9.1E-48 2E-52 372.7 23.8 203 345-556 2-205 (205)
131 TIGR02211 LolD_lipo_ex lipopro 100.0 1.8E-47 4E-52 374.9 26.2 214 342-556 1-220 (221)
132 cd03262 ABC_HisP_GlnQ_permease 100.0 1.4E-47 3E-52 373.6 25.1 209 343-555 1-213 (213)
133 PRK13646 cbiO cobalt transport 100.0 2.2E-47 4.9E-52 388.2 27.5 222 342-564 2-233 (286)
134 PRK11308 dppF dipeptide transp 100.0 3.4E-47 7.3E-52 392.6 29.1 224 341-564 4-242 (327)
135 PRK11124 artP arginine transpo 100.0 3.1E-47 6.8E-52 378.4 27.8 219 342-564 2-228 (242)
136 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.6E-48 2.1E-52 387.7 24.3 217 344-564 26-248 (269)
137 PRK13636 cbiO cobalt transport 100.0 3.1E-47 6.8E-52 386.6 27.9 221 341-564 4-229 (283)
138 PRK13644 cbiO cobalt transport 100.0 2.5E-47 5.3E-52 385.6 26.8 219 342-564 1-222 (274)
139 PRK13652 cbiO cobalt transport 100.0 3.7E-47 7.9E-52 385.0 28.1 220 342-564 3-225 (277)
140 COG4598 HisP ABC-type histidin 100.0 1.1E-48 2.5E-53 351.9 14.1 219 342-564 6-239 (256)
141 PRK13639 cbiO cobalt transport 100.0 5E-47 1.1E-51 383.6 27.8 220 342-564 1-224 (275)
142 PRK11614 livF leucine/isoleuci 100.0 2.9E-47 6.2E-52 377.5 25.3 217 342-564 5-224 (237)
143 cd03257 ABC_NikE_OppD_transpor 100.0 4.4E-47 9.5E-52 373.9 26.4 218 342-559 1-228 (228)
144 PRK13635 cbiO cobalt transport 100.0 4.2E-47 9.2E-52 384.7 27.0 221 341-564 4-227 (279)
145 PRK10584 putative ABC transpor 100.0 7.1E-47 1.5E-51 372.5 27.6 217 341-558 5-227 (228)
146 PRK11022 dppD dipeptide transp 100.0 5.3E-47 1.1E-51 391.3 27.9 223 342-564 3-241 (326)
147 PRK11300 livG leucine/isoleuci 100.0 4.6E-47 1E-51 380.1 26.5 220 341-564 4-241 (255)
148 PRK11231 fecE iron-dicitrate t 100.0 4.5E-47 9.8E-52 380.1 26.3 219 342-564 2-225 (255)
149 PRK10575 iron-hydroxamate tran 100.0 4.5E-47 9.7E-52 382.2 26.2 220 341-564 10-235 (265)
150 PRK13649 cbiO cobalt transport 100.0 8.2E-47 1.8E-51 383.4 27.7 221 343-564 3-232 (280)
151 PRK11247 ssuB aliphatic sulfon 100.0 8E-47 1.7E-51 377.6 26.9 208 341-562 11-219 (257)
152 PRK14268 phosphate ABC transpo 100.0 1E-46 2.2E-51 378.2 27.7 218 341-564 11-240 (258)
153 TIGR03410 urea_trans_UrtE urea 100.0 5.6E-47 1.2E-51 373.7 25.3 215 343-564 1-219 (230)
154 TIGR03005 ectoine_ehuA ectoine 100.0 8.4E-47 1.8E-51 377.6 26.7 218 343-564 1-234 (252)
155 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.1E-47 1.3E-51 368.5 24.8 210 343-559 1-211 (211)
156 PRK09473 oppD oligopeptide tra 100.0 1.1E-46 2.4E-51 389.2 28.3 224 341-564 11-249 (330)
157 cd03235 ABC_Metallic_Cations A 100.0 2.9E-47 6.3E-52 371.3 22.6 206 345-559 2-213 (213)
158 COG0444 DppD ABC-type dipeptid 100.0 7.2E-47 1.6E-51 374.4 25.2 222 343-564 2-241 (316)
159 PRK10253 iron-enterobactin tra 100.0 8.1E-47 1.8E-51 380.3 26.1 221 340-564 5-231 (265)
160 TIGR03873 F420-0_ABC_ATP propo 100.0 9.9E-47 2.2E-51 377.9 26.2 218 343-564 2-224 (256)
161 PRK14247 phosphate ABC transpo 100.0 1.6E-46 3.4E-51 375.2 27.2 218 342-564 3-232 (250)
162 PRK14250 phosphate ABC transpo 100.0 1.1E-46 2.3E-51 374.3 25.6 214 342-564 3-219 (241)
163 TIGR02769 nickel_nikE nickel i 100.0 1.6E-46 3.5E-51 378.1 27.1 224 342-565 2-239 (265)
164 PRK15112 antimicrobial peptide 100.0 1.7E-46 3.6E-51 378.3 27.0 224 341-564 3-237 (267)
165 PRK14267 phosphate ABC transpo 100.0 1.8E-46 3.9E-51 375.4 27.0 218 342-564 4-235 (253)
166 PRK14242 phosphate transporter 100.0 2.2E-46 4.8E-51 374.8 27.6 219 340-564 4-235 (253)
167 TIGR01978 sufC FeS assembly AT 100.0 1.6E-46 3.4E-51 373.6 26.3 219 343-565 1-233 (243)
168 PRK13632 cbiO cobalt transport 100.0 1.5E-46 3.3E-51 379.4 26.2 221 341-564 6-229 (271)
169 PRK13633 cobalt transporter AT 100.0 1.9E-46 4.1E-51 380.4 26.9 223 341-564 3-231 (280)
170 COG4181 Predicted ABC-type tra 100.0 4.4E-47 9.6E-52 339.3 19.5 216 342-558 6-227 (228)
171 PRK10771 thiQ thiamine transpo 100.0 1.6E-46 3.4E-51 371.0 25.3 216 342-564 1-217 (232)
172 PRK14273 phosphate ABC transpo 100.0 2.7E-46 5.9E-51 374.4 27.1 218 341-564 6-236 (254)
173 PRK15093 antimicrobial peptide 100.0 2.3E-46 4.9E-51 387.7 27.4 223 342-564 3-246 (330)
174 cd03267 ABC_NatA_like Similar 100.0 1.8E-46 3.9E-51 371.4 25.1 202 358-559 33-236 (236)
175 TIGR01277 thiQ thiamine ABC tr 100.0 3E-46 6.4E-51 364.2 26.2 211 343-560 1-212 (213)
176 cd03300 ABC_PotA_N PotA is an 100.0 2.7E-46 5.9E-51 369.3 26.1 217 343-564 1-218 (232)
177 PRK13645 cbiO cobalt transport 100.0 2.9E-46 6.4E-51 380.8 27.2 222 342-564 6-238 (289)
178 PRK13640 cbiO cobalt transport 100.0 2.7E-46 5.9E-51 379.5 26.7 221 341-564 4-230 (282)
179 PRK09984 phosphonate/organopho 100.0 2.6E-46 5.7E-51 376.1 26.2 220 341-564 3-240 (262)
180 PRK13648 cbiO cobalt transport 100.0 3.4E-46 7.3E-51 376.6 26.9 221 341-564 6-229 (269)
181 TIGR03740 galliderm_ABC gallid 100.0 3.8E-46 8.1E-51 366.1 26.2 210 343-563 1-210 (223)
182 PRK14235 phosphate transporter 100.0 7.1E-46 1.5E-50 373.8 28.0 219 340-564 17-249 (267)
183 TIGR00968 3a0106s01 sulfate AB 100.0 4.7E-46 1E-50 368.7 26.3 218 343-565 1-219 (237)
184 PRK14269 phosphate ABC transpo 100.0 4.9E-46 1.1E-50 370.7 26.3 217 342-564 2-228 (246)
185 cd03297 ABC_ModC_molybdenum_tr 100.0 4.3E-46 9.4E-51 363.3 25.4 204 347-559 5-214 (214)
186 PRK11144 modC molybdate transp 100.0 3.2E-46 7E-51 389.6 26.0 210 342-564 1-216 (352)
187 PRK13642 cbiO cobalt transport 100.0 6.2E-46 1.4E-50 376.0 27.3 221 342-564 4-227 (277)
188 PRK10744 pstB phosphate transp 100.0 6.6E-46 1.4E-50 372.7 27.1 218 341-564 12-242 (260)
189 cd03299 ABC_ModC_like Archeal 100.0 8.3E-46 1.8E-50 366.4 26.5 216 343-564 1-217 (235)
190 PRK14241 phosphate transporter 100.0 1.1E-45 2.3E-50 370.9 27.2 218 342-564 4-240 (258)
191 TIGR02142 modC_ABC molybdenum 100.0 5.6E-46 1.2E-50 388.4 26.1 210 347-564 4-219 (354)
192 PRK11701 phnK phosphonate C-P 100.0 1.2E-45 2.7E-50 370.4 27.6 219 342-564 6-239 (258)
193 PRK13547 hmuV hemin importer A 100.0 7.5E-46 1.6E-50 373.7 25.7 219 342-564 1-242 (272)
194 PRK14256 phosphate ABC transpo 100.0 1.7E-45 3.6E-50 368.2 27.9 219 341-564 3-234 (252)
195 PRK14274 phosphate ABC transpo 100.0 1.4E-45 3.1E-50 370.2 27.4 219 340-564 10-241 (259)
196 PRK14245 phosphate ABC transpo 100.0 1.9E-45 4E-50 367.4 28.0 218 341-564 2-232 (250)
197 PRK14270 phosphate ABC transpo 100.0 1.9E-45 4.1E-50 367.6 27.4 218 341-564 3-233 (251)
198 PRK10762 D-ribose transporter 100.0 9E-46 1.9E-50 405.2 27.3 219 342-564 4-228 (501)
199 PRK14248 phosphate ABC transpo 100.0 1.9E-45 4.2E-50 371.0 27.3 219 340-564 19-250 (268)
200 PRK14259 phosphate ABC transpo 100.0 1.7E-45 3.7E-50 371.3 26.4 218 340-564 11-251 (269)
201 PRK14240 phosphate transporter 100.0 2.8E-45 6E-50 366.2 27.1 217 342-564 3-232 (250)
202 PRK14239 phosphate transporter 100.0 2.9E-45 6.4E-50 366.5 26.9 218 341-564 4-234 (252)
203 PRK13549 xylose transporter AT 100.0 1.6E-45 3.6E-50 403.6 27.2 220 341-564 4-230 (506)
204 cd03234 ABCG_White The White s 100.0 2.6E-45 5.6E-50 360.9 25.8 216 342-559 3-226 (226)
205 PRK14272 phosphate ABC transpo 100.0 4.2E-45 9E-50 365.4 27.0 218 342-564 4-234 (252)
206 PRK09700 D-allose transporter 100.0 2E-45 4.3E-50 403.5 26.9 220 341-564 4-232 (510)
207 COG4559 ABC-type hemin transpo 100.0 7.1E-46 1.5E-50 343.0 19.6 220 342-565 1-229 (259)
208 PRK14275 phosphate ABC transpo 100.0 4.1E-45 8.8E-50 371.5 27.1 219 340-564 37-268 (286)
209 PRK14251 phosphate ABC transpo 100.0 4.6E-45 9.9E-50 364.9 26.9 217 342-564 4-233 (251)
210 PRK14262 phosphate ABC transpo 100.0 5.6E-45 1.2E-49 364.0 27.3 217 342-564 3-232 (250)
211 KOG0066|consensus 100.0 1.8E-46 3.8E-51 376.8 16.4 378 59-562 380-787 (807)
212 PRK14238 phosphate transporter 100.0 4.4E-45 9.6E-50 368.7 26.8 219 340-564 22-253 (271)
213 PRK15439 autoinducer 2 ABC tra 100.0 2.9E-45 6.3E-50 401.7 27.5 216 341-564 10-227 (510)
214 COG4525 TauB ABC-type taurine 100.0 1.3E-45 2.8E-50 336.7 20.4 215 342-562 3-220 (259)
215 TIGR02982 heterocyst_DevA ABC 100.0 4.3E-45 9.4E-50 357.8 25.7 212 343-555 2-219 (220)
216 TIGR02323 CP_lyasePhnK phospho 100.0 6.2E-45 1.3E-49 364.3 27.3 219 342-564 3-236 (253)
217 PRK14237 phosphate transporter 100.0 8.4E-45 1.8E-49 366.0 28.0 219 340-564 18-249 (267)
218 TIGR03608 L_ocin_972_ABC putat 100.0 2.8E-45 6E-50 355.5 23.5 201 345-550 1-206 (206)
219 PRK10418 nikD nickel transport 100.0 7.2E-45 1.6E-49 363.9 27.0 215 342-564 4-228 (254)
220 PRK14249 phosphate ABC transpo 100.0 8.5E-45 1.8E-49 362.9 27.3 217 342-564 4-233 (251)
221 PRK14254 phosphate ABC transpo 100.0 8.6E-45 1.9E-49 368.8 27.5 218 340-564 37-267 (285)
222 PRK14244 phosphate ABC transpo 100.0 6.6E-45 1.4E-49 363.7 26.1 216 343-564 6-235 (251)
223 PRK13538 cytochrome c biogenes 100.0 4E-45 8.8E-50 353.8 23.8 202 342-550 1-202 (204)
224 PRK10419 nikE nickel transport 100.0 1E-44 2.2E-49 365.5 27.5 223 342-564 3-239 (268)
225 TIGR01184 ntrCD nitrate transp 100.0 3.8E-45 8.2E-50 360.5 23.8 199 362-564 1-202 (230)
226 PRK14253 phosphate ABC transpo 100.0 8.5E-45 1.8E-49 362.5 26.4 217 342-564 3-231 (249)
227 PRK10247 putative ABC transpor 100.0 5E-45 1.1E-49 358.5 24.3 214 340-561 5-222 (225)
228 PRK14236 phosphate transporter 100.0 1.5E-44 3.3E-49 365.0 28.4 218 341-564 24-254 (272)
229 COG4604 CeuD ABC-type enteroch 100.0 1.2E-46 2.6E-51 344.0 11.7 220 342-565 1-224 (252)
230 PRK14258 phosphate ABC transpo 100.0 1.1E-44 2.4E-49 363.9 27.1 218 342-564 7-243 (261)
231 PRK14271 phosphate ABC transpo 100.0 1.2E-44 2.7E-49 366.1 27.3 218 341-564 20-249 (276)
232 TIGR02770 nickel_nikD nickel i 100.0 4.9E-45 1.1E-49 359.8 23.7 203 361-564 1-213 (230)
233 PRK14260 phosphate ABC transpo 100.0 1.3E-44 2.9E-49 363.0 26.6 217 342-564 7-241 (259)
234 PRK14261 phosphate ABC transpo 100.0 1.7E-44 3.6E-49 361.2 26.5 217 342-564 6-235 (253)
235 PRK14265 phosphate ABC transpo 100.0 1.9E-44 4.1E-49 364.5 27.0 218 340-564 18-256 (274)
236 PRK14255 phosphate ABC transpo 100.0 2.7E-44 5.8E-49 359.5 27.9 218 341-564 4-234 (252)
237 cd03252 ABCC_Hemolysin The ABC 100.0 3.4E-45 7.3E-50 362.7 20.9 215 343-564 1-223 (237)
238 COG1129 MglA ABC-type sugar tr 100.0 1.1E-44 2.4E-49 381.1 25.5 216 341-560 7-228 (500)
239 PRK14246 phosphate ABC transpo 100.0 2.6E-44 5.6E-49 360.2 27.0 219 341-564 9-239 (257)
240 PRK10261 glutathione transport 100.0 1.4E-44 3E-49 404.3 27.8 224 341-564 11-256 (623)
241 PRK13543 cytochrome c biogenes 100.0 2E-44 4.4E-49 351.5 25.4 203 341-552 10-212 (214)
242 COG1123 ATPase components of v 100.0 1.3E-44 2.8E-49 382.9 25.9 224 342-565 5-243 (539)
243 PRK14243 phosphate transporter 100.0 2.1E-44 4.5E-49 362.5 26.2 217 341-564 9-246 (264)
244 PRK15056 manganese/iron transp 100.0 1.8E-44 4E-49 364.5 25.8 217 342-564 6-228 (272)
245 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 2E-44 4.2E-49 353.9 25.0 202 343-559 23-224 (224)
246 COG4161 ArtP ABC-type arginine 100.0 4.8E-45 1E-49 323.1 18.5 219 342-564 2-228 (242)
247 cd03251 ABCC_MsbA MsbA is an e 100.0 7.9E-45 1.7E-49 359.3 22.2 215 343-564 1-223 (234)
248 PRK11288 araG L-arabinose tran 100.0 2.1E-44 4.4E-49 394.5 27.8 217 341-561 3-224 (501)
249 TIGR02633 xylG D-xylose ABC tr 100.0 1.9E-44 4.2E-49 394.9 27.3 219 342-564 1-228 (500)
250 CHL00131 ycf16 sulfate ABC tra 100.0 4.9E-44 1.1E-48 357.6 27.5 218 341-562 6-237 (252)
251 PRK10982 galactose/methyl gala 100.0 1.6E-44 3.5E-49 394.6 25.7 216 345-564 1-221 (491)
252 cd03231 ABC_CcmA_heme_exporter 100.0 1.5E-44 3.3E-49 348.9 22.5 198 343-550 1-198 (201)
253 PRK14263 phosphate ABC transpo 100.0 5.8E-44 1.3E-48 358.4 27.5 217 341-564 7-243 (261)
254 PRK03695 vitamin B12-transport 100.0 1.8E-44 3.9E-49 359.6 23.4 211 344-564 2-220 (248)
255 cd03245 ABCC_bacteriocin_expor 100.0 1.5E-44 3.2E-49 354.0 21.8 206 343-559 3-220 (220)
256 PRK14257 phosphate ABC transpo 100.0 8.3E-44 1.8E-48 367.4 28.4 222 339-564 77-311 (329)
257 cd03233 ABC_PDR_domain1 The pl 100.0 5.1E-44 1.1E-48 345.4 24.6 195 342-559 3-202 (202)
258 PRK14266 phosphate ABC transpo 100.0 6.8E-44 1.5E-48 356.2 26.2 217 342-564 3-232 (250)
259 TIGR02324 CP_lyasePhnL phospho 100.0 6.3E-44 1.4E-48 350.6 25.1 210 342-551 1-223 (224)
260 TIGR03269 met_CoM_red_A2 methy 100.0 3.7E-44 8E-49 394.4 25.9 218 343-564 1-256 (520)
261 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.7E-44 5.8E-49 356.5 22.4 216 343-564 1-224 (238)
262 cd03230 ABC_DR_subfamily_A Thi 100.0 5.4E-44 1.2E-48 336.9 22.9 173 343-555 1-173 (173)
263 PRK14252 phosphate ABC transpo 100.0 1.6E-43 3.4E-48 356.4 27.7 219 340-564 14-247 (265)
264 PRK15134 microcin C ABC transp 100.0 8.4E-44 1.8E-48 392.2 27.9 223 342-564 5-244 (529)
265 cd03254 ABCC_Glucan_exporter_l 100.0 2.7E-44 5.9E-49 354.3 21.4 214 343-564 3-224 (229)
266 TIGR01257 rim_protein retinal- 100.0 7.3E-44 1.6E-48 427.0 28.5 222 341-565 927-1148(2272)
267 PRK09580 sufC cysteine desulfu 100.0 1.3E-43 2.8E-48 353.8 25.6 219 342-564 1-233 (248)
268 PRK13546 teichoic acids export 100.0 2.1E-43 4.6E-48 354.1 27.2 211 342-564 4-230 (264)
269 PRK09544 znuC high-affinity zi 100.0 9.5E-44 2E-48 354.6 24.5 201 342-564 4-207 (251)
270 COG3845 ABC-type uncharacteriz 100.0 8.2E-44 1.8E-48 366.9 23.7 216 341-560 3-223 (501)
271 cd03253 ABCC_ATM1_transporter 100.0 1E-43 2.2E-48 351.8 23.2 214 343-564 1-222 (236)
272 cd03213 ABCG_EPDR ABCG transpo 100.0 1.9E-43 4.1E-48 339.2 24.1 187 342-559 3-194 (194)
273 cd03229 ABC_Class3 This class 100.0 1.1E-43 2.3E-48 336.4 21.9 174 343-554 1-178 (178)
274 cd03232 ABC_PDR_domain2 The pl 100.0 2.2E-43 4.7E-48 338.3 24.2 187 341-559 2-192 (192)
275 cd03289 ABCC_CFTR2 The CFTR su 100.0 7.4E-44 1.6E-48 358.8 21.7 210 343-565 3-224 (275)
276 TIGR01189 ccmA heme ABC export 100.0 1.4E-43 3.1E-48 341.4 22.4 197 343-549 1-197 (198)
277 PRK13539 cytochrome c biogenes 100.0 1.9E-43 4.1E-48 342.8 23.1 199 342-552 2-200 (207)
278 PRK14264 phosphate ABC transpo 100.0 4.8E-43 1E-47 359.4 27.2 218 341-564 44-287 (305)
279 PRK13540 cytochrome c biogenes 100.0 2.3E-43 5E-48 340.5 22.9 197 342-548 1-197 (200)
280 PRK10938 putative molybdenum t 100.0 1.2E-43 2.5E-48 387.9 23.5 211 342-564 3-222 (490)
281 cd03244 ABCC_MRP_domain2 Domai 100.0 2.2E-43 4.7E-48 346.0 22.1 206 343-560 3-220 (221)
282 cd03248 ABCC_TAP TAP, the Tran 100.0 1.2E-43 2.7E-48 349.0 20.4 212 340-555 9-226 (226)
283 cd03215 ABC_Carb_Monos_II This 100.0 4.1E-43 8.9E-48 333.6 23.1 175 341-555 3-182 (182)
284 cd03246 ABCC_Protease_Secretio 100.0 3.3E-43 7.1E-48 331.5 21.5 172 343-555 1-173 (173)
285 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.7E-43 1.2E-47 339.6 23.8 202 341-561 5-207 (207)
286 cd03247 ABCC_cytochrome_bd The 100.0 4.3E-43 9.4E-48 332.3 21.2 178 343-559 1-178 (178)
287 cd03214 ABC_Iron-Siderophores_ 100.0 2.8E-43 6E-48 334.2 19.8 178 344-559 1-180 (180)
288 TIGR01166 cbiO cobalt transpor 100.0 3.4E-43 7.4E-48 336.5 20.5 182 358-539 4-189 (190)
289 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.2E-42 2.5E-47 335.4 23.2 185 343-562 1-190 (200)
290 PRK13545 tagH teichoic acids e 100.0 1.8E-42 4E-47 368.0 26.6 211 341-564 20-230 (549)
291 COG4148 ModC ABC-type molybdat 100.0 1.1E-43 2.4E-48 340.5 14.2 195 364-564 16-216 (352)
292 cd03288 ABCC_SUR2 The SUR doma 100.0 1.1E-42 2.5E-47 348.6 21.4 216 341-564 18-241 (257)
293 TIGR03771 anch_rpt_ABC anchore 100.0 2.1E-42 4.6E-47 339.3 22.8 194 367-565 1-200 (223)
294 COG4988 CydD ABC-type transpor 100.0 1.1E-42 2.3E-47 366.8 21.7 212 342-565 320-542 (559)
295 KOG0058|consensus 100.0 9.3E-43 2E-47 373.6 20.6 219 341-565 464-690 (716)
296 COG4619 ABC-type uncharacteriz 100.0 1.7E-43 3.6E-48 315.4 12.3 197 358-557 15-214 (223)
297 COG2274 SunT ABC-type bacterio 100.0 6.6E-43 1.4E-47 388.4 19.6 214 341-565 470-695 (709)
298 KOG0065|consensus 100.0 9.7E-42 2.1E-46 384.2 28.7 221 341-563 786-1018(1391)
299 TIGR01187 potA spermidine/putr 100.0 3.5E-42 7.5E-47 355.7 22.3 187 377-564 1-188 (325)
300 cd03216 ABC_Carb_Monos_I This 100.0 1E-41 2.2E-46 318.1 22.9 160 343-557 1-162 (163)
301 cd03228 ABCC_MRP_Like The MRP 100.0 4.2E-42 9.1E-47 323.4 20.3 170 343-554 1-171 (171)
302 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.3E-42 1.2E-46 389.2 24.0 210 342-565 451-672 (686)
303 KOG0057|consensus 100.0 3.7E-42 7.9E-47 357.3 20.1 213 340-565 349-573 (591)
304 PRK11174 cysteine/glutathione 100.0 5.1E-42 1.1E-46 383.2 22.7 211 342-565 349-571 (588)
305 COG4586 ABC-type uncharacteriz 100.0 1.4E-42 3E-47 332.4 15.4 207 359-565 37-245 (325)
306 PLN03211 ABC transporter G-25; 100.0 8.3E-42 1.8E-46 381.8 23.1 214 345-565 71-295 (659)
307 PRK10535 macrolide transporter 100.0 5.6E-41 1.2E-45 376.6 29.5 222 342-564 4-230 (648)
308 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-41 2.8E-46 329.4 21.0 195 343-554 1-204 (204)
309 cd03290 ABCC_SUR1_N The SUR do 100.0 1.8E-41 3.9E-46 331.7 22.1 199 344-554 2-218 (218)
310 PRK11160 cysteine/glutathione 100.0 1.1E-41 2.4E-46 378.5 22.9 213 342-565 338-561 (574)
311 COG4608 AppF ABC-type oligopep 100.0 1E-41 2.2E-46 331.1 19.6 188 341-564 3-197 (268)
312 PRK15064 ABC transporter ATP-b 100.0 2.6E-41 5.6E-46 372.5 25.4 206 342-564 1-240 (530)
313 PRK11176 lipid transporter ATP 100.0 9E-42 2E-46 380.9 21.8 214 342-565 341-566 (582)
314 PRK10790 putative multidrug tr 100.0 1.6E-41 3.5E-46 379.3 23.1 211 342-565 340-562 (592)
315 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 9.7E-42 2.1E-46 388.6 21.5 211 342-565 477-699 (710)
316 KOG0055|consensus 100.0 8.9E-42 1.9E-46 385.0 20.8 214 342-565 350-575 (1228)
317 PRK13541 cytochrome c biogenes 100.0 3.9E-41 8.4E-46 323.7 21.8 192 342-547 1-192 (195)
318 PRK11819 putative ABC transpor 100.0 4E-41 8.6E-46 372.5 25.0 206 341-563 5-247 (556)
319 TIGR01842 type_I_sec_PrtD type 100.0 5.9E-41 1.3E-45 371.0 25.8 218 342-565 316-541 (544)
320 COG4674 Uncharacterized ABC-ty 100.0 1.6E-41 3.4E-46 310.0 17.0 220 341-565 4-234 (249)
321 COG1132 MdlB ABC-type multidru 100.0 3.3E-41 7.2E-46 374.9 23.4 216 342-565 328-551 (567)
322 TIGR03375 type_I_sec_LssB type 100.0 2.1E-41 4.6E-46 384.7 22.2 213 342-565 463-687 (694)
323 TIGR00958 3a01208 Conjugate Tr 100.0 2E-41 4.4E-46 384.7 21.6 212 342-565 478-701 (711)
324 COG1119 ModF ABC-type molybden 100.0 1.5E-41 3.3E-46 322.9 16.9 216 341-560 30-256 (257)
325 COG1126 GlnQ ABC-type polar am 100.0 2.5E-41 5.4E-46 314.9 16.9 180 1-180 39-226 (240)
326 COG4987 CydC ABC-type transpor 100.0 1.1E-41 2.5E-46 353.4 16.2 213 342-565 336-560 (573)
327 TIGR01193 bacteriocin_ABC ABC- 100.0 4.8E-41 1E-45 382.7 22.9 212 342-565 473-696 (708)
328 cd03237 ABC_RNaseL_inhibitor_d 100.0 1.1E-40 2.4E-45 331.2 22.2 180 360-554 8-193 (246)
329 cd03223 ABCD_peroxisomal_ALDP 100.0 1.5E-40 3.2E-45 311.2 21.2 164 343-554 1-164 (166)
330 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.6E-40 3.5E-45 367.5 25.1 206 341-563 3-245 (552)
331 TIGR01192 chvA glucan exporter 100.0 2E-40 4.3E-45 369.0 24.9 216 342-565 334-557 (585)
332 PRK13657 cyclic beta-1,2-gluca 100.0 2E-40 4.3E-45 370.2 24.9 212 342-565 334-557 (588)
333 COG4172 ABC-type uncharacteriz 100.0 2.5E-40 5.5E-45 331.2 22.5 225 340-564 4-245 (534)
334 cd03291 ABCC_CFTR1 The CFTR su 100.0 5.8E-40 1.3E-44 331.7 24.9 198 340-565 37-246 (282)
335 TIGR02203 MsbA_lipidA lipid A 100.0 1E-40 2.2E-45 371.7 21.4 213 342-564 330-554 (571)
336 KOG0059|consensus 100.0 5.1E-40 1.1E-44 378.6 25.4 223 340-565 562-786 (885)
337 PRK15177 Vi polysaccharide exp 100.0 4.5E-40 9.7E-45 320.4 21.1 189 360-564 1-190 (213)
338 PRK10789 putative multidrug tr 100.0 4.8E-40 1E-44 365.3 23.9 213 342-565 313-537 (569)
339 COG1134 TagH ABC-type polysacc 100.0 8E-40 1.7E-44 311.6 21.9 195 358-564 39-234 (249)
340 TIGR01846 type_I_sec_HlyB type 100.0 2.3E-40 5E-45 376.1 21.7 213 342-565 455-679 (694)
341 TIGR02204 MsbA_rel ABC transpo 100.0 3.7E-40 8.1E-45 367.5 21.9 213 342-564 337-561 (576)
342 cd03236 ABC_RNaseL_inhibitor_d 100.0 4.5E-40 9.9E-45 328.2 20.1 203 346-559 4-220 (255)
343 TIGR00955 3a01204 The Eye Pigm 100.0 9E-40 1.9E-44 365.2 23.3 205 358-564 37-254 (617)
344 COG1125 OpuBA ABC-type proline 100.0 5.7E-40 1.2E-44 311.6 15.7 180 1-180 38-226 (309)
345 PRK10636 putative ABC transpor 100.0 4.2E-39 9.1E-44 360.5 25.4 203 342-562 1-232 (638)
346 PRK10522 multidrug transporter 100.0 5.8E-39 1.2E-43 355.2 24.3 204 342-560 322-532 (547)
347 COG1135 AbcC ABC-type metal io 100.0 1.3E-39 2.7E-44 318.3 15.7 180 1-180 43-232 (339)
348 TIGR01194 cyc_pep_trnsptr cycl 100.0 9.8E-39 2.1E-43 353.6 24.1 207 342-559 337-552 (555)
349 COG1101 PhnK ABC-type uncharac 100.0 5.1E-39 1.1E-43 298.1 17.8 219 343-561 2-233 (263)
350 COG4167 SapF ABC-type antimicr 100.0 5.9E-39 1.3E-43 289.9 17.7 224 342-565 4-238 (267)
351 COG0396 sufC Cysteine desulfur 100.0 5.6E-38 1.2E-42 295.0 24.0 217 342-562 3-230 (251)
352 cd03221 ABCF_EF-3 ABCF_EF-3 E 100.0 1.7E-38 3.6E-43 290.1 19.9 144 343-554 1-144 (144)
353 TIGR02857 CydD thiol reductant 100.0 8.4E-39 1.8E-43 352.9 21.5 198 342-550 320-529 (529)
354 PTZ00265 multidrug resistance 100.0 7.2E-39 1.6E-43 384.0 22.3 209 342-553 382-655 (1466)
355 COG4555 NatA ABC-type Na+ tran 100.0 4.7E-39 1E-43 295.5 15.2 180 1-180 39-223 (245)
356 PRK11147 ABC transporter ATPas 100.0 4.5E-38 9.8E-43 352.9 25.7 203 342-563 3-240 (635)
357 cd03222 ABC_RNaseL_inhibitor T 100.0 2.6E-38 5.6E-43 297.3 18.8 153 346-562 4-159 (177)
358 TIGR02868 CydC thiol reductant 100.0 1.6E-38 3.5E-43 350.7 18.8 185 342-537 334-529 (529)
359 COG0488 Uup ATPase components 100.0 1.4E-37 3E-42 335.6 22.1 199 342-558 3-231 (530)
360 COG4618 ArpD ABC-type protease 100.0 8.6E-38 1.9E-42 321.7 19.1 217 341-565 333-559 (580)
361 COG1122 CbiO ABC-type cobalt t 100.0 5E-38 1.1E-42 306.9 16.3 180 1-180 41-229 (235)
362 COG4107 PhnK ABC-type phosphon 100.0 1.9E-37 4E-42 278.1 17.3 216 341-564 5-239 (258)
363 cd03238 ABC_UvrA The excision 100.0 4.1E-37 8.9E-42 288.9 19.4 156 358-554 7-165 (176)
364 TIGR00956 3a01205 Pleiotropic 100.0 2.8E-37 6E-42 369.9 22.7 207 358-564 73-298 (1394)
365 cd00267 ABC_ATPase ABC (ATP-bi 100.0 8.6E-37 1.9E-41 283.2 21.0 155 345-554 2-157 (157)
366 COG4133 CcmA ABC-type transpor 100.0 1.9E-37 4E-42 282.7 15.5 192 343-541 3-194 (209)
367 COG1118 CysA ABC-type sulfate/ 100.0 1.4E-37 3E-42 303.2 15.6 180 1-180 39-228 (345)
368 COG1131 CcmA ABC-type multidru 100.0 4E-37 8.7E-42 312.7 19.6 180 1-180 42-227 (293)
369 COG1127 Ttg2A ABC-type transpo 100.0 2.5E-37 5.5E-42 292.4 16.3 180 1-180 45-236 (263)
370 TIGR00954 3a01203 Peroxysomal 100.0 5.9E-37 1.3E-41 344.4 22.2 194 341-552 450-653 (659)
371 PRK13409 putative ATPase RIL; 100.0 2.9E-37 6.2E-42 341.3 19.0 193 347-553 78-287 (590)
372 COG3839 MalK ABC-type sugar tr 100.0 2.7E-37 5.9E-42 313.1 16.5 180 1-180 40-224 (338)
373 COG1116 TauB ABC-type nitrate/ 100.0 3.6E-37 7.8E-42 295.5 15.6 167 1-169 40-212 (248)
374 KOG0056|consensus 100.0 2.3E-37 4.9E-42 315.1 12.8 217 341-565 536-760 (790)
375 COG4136 ABC-type uncharacteriz 100.0 1E-36 2.2E-41 267.1 14.3 202 342-550 2-207 (213)
376 PLN03140 ABC transporter G fam 100.0 1.8E-36 4E-41 361.7 19.4 206 358-565 177-426 (1470)
377 COG4152 ABC-type uncharacteriz 100.0 2.1E-36 4.5E-41 285.6 15.2 179 1-180 39-220 (300)
378 PRK13537 nodulation ABC transp 100.0 6.1E-36 1.3E-40 306.6 20.1 179 1-179 44-227 (306)
379 COG4175 ProV ABC-type proline/ 100.0 1.5E-36 3.3E-41 296.1 14.0 180 1-180 65-255 (386)
380 COG4778 PhnL ABC-type phosphon 100.0 2.3E-36 4.9E-41 270.2 13.8 211 342-552 4-227 (235)
381 PRK00635 excinuclease ABC subu 100.0 5.4E-34 1.2E-38 337.3 37.9 351 45-565 1338-1795(1809)
382 COG1137 YhbG ABC-type (unclass 100.0 1.4E-36 3.1E-41 278.8 12.1 180 1-180 41-229 (243)
383 COG0178 UvrA Excinuclease ATPa 100.0 7.7E-34 1.7E-38 305.9 34.9 369 45-565 427-918 (935)
384 KOG0061|consensus 100.0 1.8E-35 4E-40 327.5 22.7 221 342-564 25-258 (613)
385 COG3842 PotA ABC-type spermidi 100.0 2.6E-36 5.6E-41 307.6 14.5 180 1-180 42-227 (352)
386 PLN03073 ABC transporter F fam 100.0 4.5E-36 9.7E-41 337.5 17.1 215 341-562 176-427 (718)
387 TIGR02314 ABC_MetN D-methionin 100.0 3.8E-35 8.3E-40 303.6 19.7 179 1-179 42-230 (343)
388 PRK11650 ugpC glycerol-3-phosp 100.0 3.6E-35 7.8E-40 306.1 19.2 180 1-180 41-225 (356)
389 TIGR01188 drrA daunorubicin re 100.0 4.7E-35 1E-39 300.1 19.7 179 1-179 30-213 (302)
390 PRK11432 fbpC ferric transport 100.0 5.5E-35 1.2E-39 303.9 19.7 180 1-180 43-227 (351)
391 TIGR01186 proV glycine betaine 100.0 6E-35 1.3E-39 303.8 19.9 180 1-180 30-220 (363)
392 PRK13536 nodulation factor exp 100.0 7.2E-35 1.6E-39 302.0 20.4 180 1-180 78-262 (340)
393 PLN03232 ABC transporter C fam 100.0 5.1E-35 1.1E-39 353.7 21.9 202 342-565 614-827 (1495)
394 PLN03130 ABC transporter C fam 100.0 6.1E-35 1.3E-39 353.3 22.5 201 342-565 614-827 (1622)
395 TIGR03258 PhnT 2-aminoethylpho 100.0 7.4E-35 1.6E-39 303.9 20.1 180 1-180 42-229 (362)
396 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.8E-35 1.3E-39 284.1 17.1 178 1-179 41-227 (254)
397 TIGR00957 MRP_assoc_pro multi 100.0 9.9E-35 2.1E-39 351.7 23.0 204 342-564 636-848 (1522)
398 TIGR03265 PhnT2 putative 2-ami 100.0 8.8E-35 1.9E-39 302.8 19.5 180 1-180 41-225 (353)
399 cd03270 ABC_UvrA_I The excisio 100.0 4.5E-34 9.8E-39 280.6 21.1 193 358-559 7-226 (226)
400 PRK09452 potA putrescine/sperm 100.0 2.8E-34 6.1E-39 300.6 19.4 180 1-180 51-235 (375)
401 PRK11607 potG putrescine trans 100.0 4E-34 8.6E-39 300.0 19.9 180 1-180 56-240 (377)
402 TIGR01271 CFTR_protein cystic 100.0 6.1E-34 1.3E-38 343.8 24.3 189 359-565 439-635 (1490)
403 COG1120 FepC ABC-type cobalami 100.0 1.3E-34 2.9E-39 283.1 14.8 179 1-179 39-228 (258)
404 COG1124 DppF ABC-type dipeptid 100.0 2.4E-34 5.2E-39 273.6 16.1 178 1-180 44-232 (252)
405 TIGR01288 nodI ATP-binding ABC 100.0 6.3E-34 1.4E-38 291.9 20.0 179 1-179 41-224 (303)
406 PRK11000 maltose/maltodextrin 100.0 5.7E-34 1.2E-38 298.9 19.6 179 1-179 40-223 (369)
407 TIGR03522 GldA_ABC_ATP gliding 100.0 6.3E-34 1.4E-38 291.5 19.4 178 1-179 39-221 (301)
408 PRK10851 sulfate/thiosulfate t 100.0 6.1E-34 1.3E-38 296.5 19.5 180 1-180 39-227 (353)
409 cd03261 ABC_Org_Solvent_Resist 100.0 7.4E-34 1.6E-38 281.1 18.8 178 1-178 37-225 (235)
410 COG1117 PstB ABC-type phosphat 100.0 2.3E-34 5E-39 267.1 13.4 178 1-180 44-238 (253)
411 cd03265 ABC_DrrA DrrA is the A 100.0 8.9E-34 1.9E-38 277.7 18.3 177 1-177 37-219 (220)
412 PRK13651 cobalt transporter AT 100.0 8.4E-34 1.8E-38 290.3 18.5 179 1-179 44-254 (305)
413 COG5265 ATM1 ABC-type transpor 100.0 1.8E-34 4E-39 291.1 13.3 212 342-565 262-485 (497)
414 PTZ00243 ABC transporter; Prov 100.0 1E-33 2.2E-38 342.2 21.8 190 358-564 672-868 (1560)
415 PRK11153 metN DL-methionine tr 100.0 1.5E-33 3.3E-38 293.3 19.8 179 1-179 42-230 (343)
416 TIGR01187 potA spermidine/putr 100.0 1.6E-33 3.5E-38 291.2 19.6 179 1-179 7-190 (325)
417 COG1136 SalX ABC-type antimicr 100.0 1.6E-33 3.4E-38 270.3 17.8 168 1-169 42-221 (226)
418 cd03259 ABC_Carb_Solutes_like 100.0 1.9E-33 4.2E-38 273.9 18.0 172 1-172 37-213 (213)
419 COG2884 FtsE Predicted ATPase 100.0 1.6E-33 3.4E-38 257.0 16.1 172 1-172 39-219 (223)
420 PRK10070 glycine betaine trans 100.0 2.8E-33 6E-38 294.6 20.0 179 1-179 65-254 (400)
421 cd03219 ABC_Mj1267_LivG_branch 100.0 3.2E-33 6.9E-38 276.7 19.1 178 1-178 37-231 (236)
422 TIGR03415 ABC_choXWV_ATP choli 100.0 3.3E-33 7.1E-38 292.1 20.2 179 1-179 61-254 (382)
423 TIGR00960 3a0501s02 Type II (G 100.0 1.6E-33 3.5E-38 275.1 16.5 168 1-168 40-216 (216)
424 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.2E-33 6.9E-38 273.8 17.9 172 1-174 41-218 (220)
425 cd03266 ABC_NatA_sodium_export 100.0 3.2E-33 6.9E-38 273.4 17.8 172 1-172 42-218 (218)
426 PRK13637 cbiO cobalt transport 100.0 4.1E-33 8.9E-38 283.6 19.2 179 1-179 44-234 (287)
427 cd03258 ABC_MetN_methionine_tr 100.0 5.1E-33 1.1E-37 274.8 19.1 178 1-178 42-229 (233)
428 cd03296 ABC_CysA_sulfate_impor 100.0 5E-33 1.1E-37 275.9 18.9 178 1-178 39-225 (239)
429 COG4148 ModC ABC-type molybdat 100.0 1E-33 2.2E-38 272.0 13.0 175 1-181 35-220 (352)
430 cd03218 ABC_YhbG The ABC trans 100.0 6.8E-33 1.5E-37 273.7 19.2 178 1-178 37-221 (232)
431 PRK13643 cbiO cobalt transport 100.0 5.1E-33 1.1E-37 283.1 18.8 178 1-179 43-233 (288)
432 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.7E-33 1.7E-37 279.2 19.8 179 1-179 61-250 (269)
433 COG3840 ThiQ ABC-type thiamine 100.0 2.1E-33 4.5E-38 254.2 13.8 178 1-179 36-219 (231)
434 cd03269 ABC_putative_ATPase Th 100.0 7.6E-33 1.6E-37 269.2 18.5 171 1-172 37-210 (210)
435 PRK13634 cbiO cobalt transport 100.0 6.2E-33 1.3E-37 282.7 18.2 178 1-179 44-235 (290)
436 PRK15079 oligopeptide ABC tran 100.0 1E-32 2.2E-37 285.2 19.7 180 1-180 58-252 (331)
437 cd03301 ABC_MalK_N The N-termi 100.0 8.3E-33 1.8E-37 269.5 18.0 172 1-172 37-213 (213)
438 COG3638 ABC-type phosphate/pho 100.0 2.5E-33 5.5E-38 264.6 13.5 179 1-179 41-237 (258)
439 PRK13647 cbiO cobalt transport 100.0 9.8E-33 2.1E-37 279.1 18.6 177 1-177 42-225 (274)
440 cd03264 ABC_drug_resistance_li 100.0 1.2E-32 2.5E-37 268.1 18.2 171 1-172 36-211 (211)
441 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.9E-32 4.1E-37 272.2 19.6 178 1-178 38-224 (242)
442 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.6E-33 1.6E-37 270.7 16.4 167 1-168 41-218 (218)
443 PRK13641 cbiO cobalt transport 100.0 1.3E-32 2.9E-37 279.9 18.8 178 1-179 44-234 (287)
444 cd03263 ABC_subfamily_A The AB 100.0 1.4E-32 2.9E-37 269.3 18.1 176 1-177 39-219 (220)
445 cd03256 ABC_PhnC_transporter A 100.0 1.3E-32 2.8E-37 273.2 17.9 178 1-178 38-233 (241)
446 PRK09493 glnQ glutamine ABC tr 100.0 1.7E-32 3.7E-37 272.2 18.6 178 1-178 38-224 (240)
447 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-32 2.7E-37 289.9 18.5 178 1-178 40-227 (402)
448 COG0411 LivG ABC-type branched 100.0 5.9E-33 1.3E-37 264.3 14.3 179 1-180 41-240 (250)
449 PRK11264 putative amino-acid A 100.0 2.5E-32 5.3E-37 272.8 19.3 178 1-178 40-232 (250)
450 PRK13650 cbiO cobalt transport 100.0 1.7E-32 3.7E-37 278.0 18.0 178 1-179 44-229 (279)
451 COG0444 DppD ABC-type dipeptid 100.0 1.6E-32 3.5E-37 272.3 17.3 180 1-180 42-244 (316)
452 cd03268 ABC_BcrA_bacitracin_re 100.0 2.2E-32 4.8E-37 265.5 18.0 168 1-172 37-208 (208)
453 PRK13631 cbiO cobalt transport 100.0 2.1E-32 4.6E-37 281.7 18.8 178 1-179 63-265 (320)
454 PRK13646 cbiO cobalt transport 100.0 1.9E-32 4.1E-37 278.7 18.1 178 1-179 44-235 (286)
455 TIGR02142 modC_ABC molybdenum 100.0 2.5E-32 5.4E-37 285.5 19.2 178 1-180 34-222 (354)
456 TIGR02673 FtsE cell division A 100.0 1.8E-32 3.9E-37 267.3 16.8 167 1-167 39-214 (214)
457 COG4598 HisP ABC-type histidin 100.0 4.4E-33 9.5E-38 251.3 11.0 180 1-180 43-242 (256)
458 cd03224 ABC_TM1139_LivF_branch 100.0 3E-32 6.4E-37 267.3 17.8 176 1-178 37-220 (222)
459 PRK10619 histidine/lysine/argi 100.0 4.4E-32 9.5E-37 272.1 19.2 178 1-178 42-240 (257)
460 PRK11831 putative ABC transpor 100.0 4.5E-32 9.8E-37 273.6 19.4 179 1-179 44-233 (269)
461 PRK11144 modC molybdate transp 100.0 3.1E-32 6.7E-37 284.5 18.8 174 1-180 35-219 (352)
462 cd03260 ABC_PstB_phosphate_tra 100.0 2E-32 4.3E-37 269.5 16.2 174 1-176 37-226 (227)
463 cd03226 ABC_cobalt_CbiO_domain 100.0 2.1E-32 4.5E-37 265.1 16.1 165 1-169 37-205 (205)
464 cd03297 ABC_ModC_molybdenum_tr 100.0 3.5E-32 7.6E-37 265.3 17.7 170 1-172 34-214 (214)
465 PRK10908 cell division protein 100.0 3.6E-32 7.8E-37 266.7 17.8 170 1-170 39-217 (222)
466 cd03271 ABC_UvrA_II The excisi 100.0 5.2E-32 1.1E-36 269.2 19.1 195 360-561 9-261 (261)
467 cd03292 ABC_FtsE_transporter F 100.0 2.4E-32 5.2E-37 266.4 16.3 168 1-168 38-214 (214)
468 TIGR02315 ABC_phnC phosphonate 100.0 2.3E-32 5.1E-37 271.7 16.5 177 1-177 39-233 (243)
469 TIGR01184 ntrCD nitrate transp 100.0 3E-32 6.6E-37 268.6 17.1 173 1-175 22-200 (230)
470 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.5E-32 7.5E-37 264.7 16.9 171 1-171 35-210 (211)
471 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.6E-32 1.7E-36 266.9 19.6 178 1-179 38-221 (236)
472 KOG0054|consensus 100.0 5.4E-32 1.2E-36 312.9 21.3 204 340-565 516-730 (1381)
473 PRK11629 lolD lipoprotein tran 100.0 6.9E-32 1.5E-36 266.7 19.1 172 1-173 46-228 (233)
474 PRK11124 artP arginine transpo 100.0 6.5E-32 1.4E-36 268.4 18.4 177 1-177 39-228 (242)
475 TIGR00972 3a0107s01c2 phosphat 100.0 8.5E-32 1.8E-36 268.4 19.3 177 1-179 38-232 (247)
476 PRK10895 lipopolysaccharide AB 100.0 5.3E-32 1.2E-36 268.9 17.8 178 1-178 40-225 (241)
477 PRK13636 cbiO cobalt transport 100.0 5.8E-32 1.3E-36 274.7 18.2 179 1-179 43-231 (283)
478 PRK11248 tauB taurine transpor 100.0 7.2E-32 1.6E-36 269.9 18.6 172 1-174 38-215 (255)
479 PRK14268 phosphate ABC transpo 100.0 9.1E-32 2E-36 269.9 19.1 177 1-179 49-242 (258)
480 COG0410 LivF ABC-type branched 100.0 4E-32 8.7E-37 256.7 15.4 178 1-180 40-227 (237)
481 cd03225 ABC_cobalt_CbiO_domain 100.0 4.9E-32 1.1E-36 263.7 16.6 167 1-167 38-211 (211)
482 PRK11308 dppF dipeptide transp 100.0 1.1E-31 2.3E-36 277.3 19.9 180 1-180 52-245 (327)
483 PRK13652 cbiO cobalt transport 100.0 9.3E-32 2E-36 272.5 18.7 179 1-179 41-227 (277)
484 PRK13644 cbiO cobalt transport 100.0 7.7E-32 1.7E-36 272.5 17.8 178 1-179 39-224 (274)
485 TIGR02211 LolD_lipo_ex lipopro 100.0 8.2E-32 1.8E-36 264.0 17.5 168 1-169 42-220 (221)
486 cd03235 ABC_Metallic_Cations A 100.0 5.4E-32 1.2E-36 263.8 16.0 168 1-171 36-212 (213)
487 PRK13649 cbiO cobalt transport 100.0 1E-31 2.2E-36 272.8 18.7 177 1-178 44-233 (280)
488 PF00005 ABC_tran: ABC transpo 100.0 2.4E-32 5.2E-37 247.2 12.5 132 362-506 1-137 (137)
489 PRK11022 dppD dipeptide transp 100.0 1.2E-31 2.6E-36 277.0 19.4 180 1-180 44-244 (326)
490 TIGR02770 nickel_nikD nickel i 100.0 1.4E-31 3.1E-36 263.9 19.0 179 1-179 23-215 (230)
491 cd03299 ABC_ModC_like Archeal 100.0 1.5E-31 3.3E-36 264.5 19.1 179 1-179 36-219 (235)
492 cd03262 ABC_HisP_GlnQ_permease 100.0 6.4E-32 1.4E-36 263.2 16.2 168 1-168 37-213 (213)
493 PRK13638 cbiO cobalt transport 100.0 1.3E-31 2.8E-36 270.7 19.0 179 1-179 38-225 (271)
494 TIGR03411 urea_trans_UrtD urea 100.0 1.7E-31 3.7E-36 265.4 19.5 177 1-178 39-230 (242)
495 KOG0063|consensus 100.0 1.1E-30 2.4E-35 263.2 25.4 328 70-552 193-532 (592)
496 TIGR01277 thiQ thiamine ABC tr 100.0 1.5E-31 3.2E-36 260.7 18.2 173 1-173 35-212 (213)
497 PRK10771 thiQ thiamine transpo 100.0 1.4E-31 3.1E-36 264.3 18.2 179 1-179 36-219 (232)
498 PRK14273 phosphate ABC transpo 100.0 1.7E-31 3.7E-36 267.3 18.8 177 1-179 44-238 (254)
499 PRK13635 cbiO cobalt transport 100.0 1.4E-31 3E-36 271.2 18.3 178 1-179 44-229 (279)
500 PRK09473 oppD oligopeptide tra 100.0 2.1E-31 4.5E-36 275.5 19.8 180 1-180 53-252 (330)
No 1
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.7e-79 Score=645.38 Aligned_cols=437 Identities=24% Similarity=0.324 Sum_probs=355.0
Q ss_pred CCcchHHHHHhccccCCC-ccCC------CCC---ccc----ccccceeEEcCCC--CCCCCCCHHHHHHHHHHhcC-CC
Q psy7366 1 MGLTTTPKRVVTLLLTTQ-KVPG------SNP---TID----KNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVRN-VP 63 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~-~~~~------~~~---~~~----~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~~-~~ 63 (566)
+||||+.+++.|++-++- ...| .+. ... -+...|+|+||+| .+.|-+||.+.+.-.....+ .+
T Consensus 46 sGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~ 125 (539)
T COG1123 46 SGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGS 125 (539)
T ss_pred CCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcccc
Confidence 599999999999998662 1111 110 111 1346799999998 45677999999976655543 55
Q ss_pred hhhHHHHHHHHHHHcCCCcccc--cccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CC
Q psy7366 64 SVLLNTIVNESLNKFALGHYSD--REVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EG 140 (566)
Q Consensus 64 ~~~~~~~~~~~l~~~gl~~~~~--~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g 140 (566)
..+..+++.++|+.+||++... +++++||||||||+.||+||+.+|++||+||||++||+..+.++.++|+++.+ .|
T Consensus 126 ~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g 205 (539)
T COG1123 126 RAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELG 205 (539)
T ss_pred HHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcC
Confidence 7888999999999999987554 59999999999999999999999999999999999999999999999999964 59
Q ss_pred CEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcc
Q psy7366 141 RCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPE 220 (566)
Q Consensus 141 ~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (566)
.++|+||||+..+.++||||+||++|++++.|+++++..... +|+. ..+..+....
T Consensus 206 ~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p~-hpYT-----------~~Ll~a~p~~------------ 261 (539)
T COG1123 206 MAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNPQ-HPYT-----------RGLLAAVPRL------------ 261 (539)
T ss_pred cEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhccC-Cccc-----------HHHHhhCCCc------------
Confidence 999999999999999999999999999999999999876422 1111 0000000000
Q ss_pred cccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHH
Q psy7366 221 VSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSI 300 (566)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (566)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCc-------CCCcceeeeeeEEEeCCc
Q psy7366 301 EYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANS-------KGTKPAVNQISFGVGRGE 373 (566)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~-------~~~~~~l~~isl~i~~Ge 373 (566)
...... ......+....++++++||++.|... .+...+++||||+|.+||
T Consensus 262 --------------------~~~~~~---~~~~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE 318 (539)
T COG1123 262 --------------------GDEKII---RLPRRGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGE 318 (539)
T ss_pred --------------------cccccc---ccccccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCC
Confidence 000000 00000000134579999999999732 123578999999999999
Q ss_pred EEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccC--CC-chHHhcCceEEEecCC--CCCCCCCHHHHHHHHHHhcC
Q psy7366 374 CFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI--RD-SMDLVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRN 448 (566)
Q Consensus 374 ~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~--~~-~~~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~ 448 (566)
++||+|+||||||||.|+|+|+.+|++|+|.++|.+. +. .....++++-++|||| .+.|.+||.+++......+.
T Consensus 319 ~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~ 398 (539)
T COG1123 319 TLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHG 398 (539)
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhc
Confidence 9999999999999999999999999999999999873 21 2334567889999997 58999999999988776554
Q ss_pred CC-chHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC
Q psy7366 449 VP-SVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE 526 (566)
Q Consensus 449 ~~-~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~ 526 (566)
.. ..+.++++.++++.++|.+ +++++|.+||||||||++|||||+.+|++||+|||||.||+..+..+.++|.+++++
T Consensus 399 ~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e 478 (539)
T COG1123 399 GGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEE 478 (539)
T ss_pred ccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHH
Confidence 32 3444567999999999985 799999999999999999999999999999999999999999999999999999887
Q ss_pred -CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 527 -GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 527 -g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|.|.|+||||++.+..+||||++|++|+|++.|+.+++
T Consensus 479 ~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v 517 (539)
T COG1123 479 LGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKV 517 (539)
T ss_pred hCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHH
Confidence 99999999999999999999999999999999987654
No 2
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-78 Score=672.80 Aligned_cols=456 Identities=22% Similarity=0.267 Sum_probs=350.7
Q ss_pred CCcchHHHHHhccccCCCc---cCCCC----------C---ccc---c-cccceeEEcCCC--CCCCCCCHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSN----------P---TID---K-NLSYIGYCPQFD--ALNDRLTPREHLEFYSR 58 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~----------~---~~~---~-~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~ 58 (566)
.||||++|+++|++.+... +.+.. . ... . +...||||+|+| .+++.+||.||+.+..+
T Consensus 53 sGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~ 132 (623)
T PRK10261 53 SGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIR 132 (623)
T ss_pred ChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHH
Confidence 5999999999999876431 12210 0 000 0 124699999998 67888999999998765
Q ss_pred hc-CCChhhHHHHHHHHHHHcCCCc---ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHH
Q psy7366 59 VR-NVPSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIE 134 (566)
Q Consensus 59 ~~-~~~~~~~~~~~~~~l~~~gl~~---~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~ 134 (566)
.. +.+..+..+++.++++.+||.. .+++++.+|||||||||+||+||+.+|+||||||||++||+.+++++.++|+
T Consensus 133 ~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~ 212 (623)
T PRK10261 133 LHQGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIK 212 (623)
T ss_pred HhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHH
Confidence 53 5666677788999999999963 5789999999999999999999999999999999999999999999999999
Q ss_pred HHHhC-CCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCcc
Q psy7366 135 RAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGI 213 (566)
Q Consensus 135 ~l~~~-g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (566)
+++++ |+|||+||||++++.++||||++|++|+++..|+++++..... .++. ..+.........
T Consensus 213 ~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~-~~~~-----------~~l~~~~~~~~~--- 277 (623)
T PRK10261 213 VLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGSVEQIFHAPQ-HPYT-----------RALLAAVPQLGA--- 277 (623)
T ss_pred HHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeecccCCHHHhhcCCC-Chhh-----------hhhhhccCcccc---
Confidence 99755 9999999999999999999999999999999999887643210 0000 000000000000
Q ss_pred ccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHH
Q psy7366 214 RNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALY 293 (566)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (566)
.. ..... ...
T Consensus 278 -------~~---~~~~~---------------------------~~~--------------------------------- 287 (623)
T PRK10261 278 -------MK---GLDYP---------------------------RRF--------------------------------- 287 (623)
T ss_pred -------cc---cccCC---------------------------ccc---------------------------------
Confidence 00 00000 000
Q ss_pred HHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcC-------CCcceeeeee
Q psy7366 294 SAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSK-------GTKPAVNQIS 366 (566)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~-------~~~~~l~~is 366 (566)
+.... ......... .. .........+|+++|+++.|+... +...+|+|+|
T Consensus 288 ----------------~~~~~-~~~~~~~~~----~~--~~~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs 344 (623)
T PRK10261 288 ----------------PLISL-EHPAKQEPP----IE--QDTVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVS 344 (623)
T ss_pred ----------------ccccc-ccccccCcc----cc--cccccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeE
Confidence 00000 000000000 00 000001124799999999996211 1246999999
Q ss_pred EEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHHhcCceEEEecCC--CCCCCCCHHHHH
Q psy7366 367 FGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDLVRSYIGYCPQFD--ALNDRLTPREHL 440 (566)
Q Consensus 367 l~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~~~~~i~~v~q~~--~l~~~~tv~e~l 440 (566)
|+|++||++||+||||||||||+|+|+|+++|++|+|+++|+++... ...++++|+|+||++ .+++.+||.+|+
T Consensus 345 ~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l 424 (623)
T PRK10261 345 FDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSI 424 (623)
T ss_pred eEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999987542 123467899999997 588899999999
Q ss_pred HHHHHhcCC-CchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHH
Q psy7366 441 EFYSRVRNV-PSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWT 518 (566)
Q Consensus 441 ~~~~~~~~~-~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~ 518 (566)
.+.....+. ......+++.++++.++|. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+++
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ 504 (623)
T PRK10261 425 MEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIIN 504 (623)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 876544333 2333456788999999996 57899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 519 CIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 519 ~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++++++ |.|||+||||++++..+|||+++|++|++++.|+++++
T Consensus 505 ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i 551 (623)
T PRK10261 505 LLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAV 551 (623)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999875 89999999999999999999999999999999988765
No 3
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-78 Score=658.88 Aligned_cols=427 Identities=21% Similarity=0.284 Sum_probs=343.5
Q ss_pred CCcchHHHHHhccccC----CC-ccCCCCCccc----ccccceeEEcCCCCCCCCCCHHHHHHHHHHhc--C-CChhhHH
Q psy7366 1 MGLTTTPKRVVTLLLT----TQ-KVPGSNPTID----KNLSYIGYCPQFDALNDRLTPREHLEFYSRVR--N-VPSVLLN 68 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~----~~-~~~~~~~~~~----~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~--~-~~~~~~~ 68 (566)
.||||++|+++|++.+ |+ .+.+...... .....||||||++.+++.+||.||+.+..... + .+..+..
T Consensus 42 sGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 121 (506)
T PRK13549 42 AGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMY 121 (506)
T ss_pred CCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHH
Confidence 5999999999999875 22 1223221111 11356999999999999999999998865432 1 2334556
Q ss_pred HHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecC
Q psy7366 69 TIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSH 148 (566)
Q Consensus 69 ~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH 148 (566)
+++.++++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.++.++.++|++++++|.|||++||
T Consensus 122 ~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH 201 (506)
T PRK13549 122 LRAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISH 201 (506)
T ss_pred HHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 78899999999998889999999999999999999999999999999999999999999999999999778999999999
Q ss_pred ChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccccc
Q psy7366 149 NMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNEN 228 (566)
Q Consensus 149 ~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (566)
|++++..+||||++|++|+++..|+++++... ...+.+...
T Consensus 202 ~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-------------------~~~~~~~~~-------------------- 242 (506)
T PRK13549 202 KLNEVKAISDTICVIRDGRHIGTRPAAGMTED-------------------DIITMMVGR-------------------- 242 (506)
T ss_pred cHHHHHHhcCEEEEEECCEEeeecccccCCHH-------------------HHHHHhhCc--------------------
Confidence 99999999999999999999988765542110 000000000
Q ss_pred cCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy7366 229 IDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRC 308 (566)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (566)
T Consensus 243 -------------------------------------------------------------------------------- 242 (506)
T PRK13549 243 -------------------------------------------------------------------------------- 242 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHH
Q psy7366 309 FTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTT 388 (566)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTL 388 (566)
......... . ......+|+++|+++.|+.+ +++.+|+|+||+|++||+++|+||||||||||
T Consensus 243 -------~~~~~~~~~-----~-----~~~~~~~l~~~~l~~~~~~~-~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTL 304 (506)
T PRK13549 243 -------ELTALYPRE-----P-----HTIGEVILEVRNLTAWDPVN-PHIKRVDDVSFSLRRGEILGIAGLVGAGRTEL 304 (506)
T ss_pred -------Ccccccccc-----c-----cCCCCceEEEecCccccccc-cccccccceeeEEcCCcEEEEeCCCCCCHHHH
Confidence 000000000 0 00112369999999998421 13569999999999999999999999999999
Q ss_pred HHHHHCCCC-CCccEEEEcCccCCCc--hHHhcCceEEEecCC---CCCCCCCHHHHHHHHHH--hcC---CCchHHHHH
Q psy7366 389 FKMLTGAIK-PTSGNAYVMNHSIRDS--MDLVRSYIGYCPQFD---ALNDRLTPREHLEFYSR--VRN---VPSVLLNTI 457 (566)
Q Consensus 389 l~~i~G~~~-~~~G~i~~~g~~~~~~--~~~~~~~i~~v~q~~---~l~~~~tv~e~l~~~~~--~~~---~~~~~~~~~ 457 (566)
+|+|+|+++ |++|+|.++|+++... ....+..++|+||++ .+++++|+.||+.+... +.. .......+.
T Consensus 305 lk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~ 384 (506)
T PRK13549 305 VQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKT 384 (506)
T ss_pred HHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHH
Confidence 999999998 5999999999887532 233466799999995 47888999999976431 111 122234456
Q ss_pred HHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccC
Q psy7366 458 VNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHN 536 (566)
Q Consensus 458 ~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd 536 (566)
+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|++++++|+|||++|||
T Consensus 385 ~~~~l~~~~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd 464 (506)
T PRK13549 385 ILESIQRLKVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSE 464 (506)
T ss_pred HHHHHHhcCccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 88999999996 57899999999999999999999999999999999999999999999999999998889999999999
Q ss_pred HHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 537 MEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 537 ~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++++.++|||+++|++|+++..|+++++
T Consensus 465 ~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 492 (506)
T PRK13549 465 LPEVLGLSDRVLVMHEGKLKGDLINHNL 492 (506)
T ss_pred HHHHHHhCCEEEEEECCEEEEEeccccC
Confidence 9999999999999999999999988765
No 4
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.2e-77 Score=657.88 Aligned_cols=390 Identities=26% Similarity=0.358 Sum_probs=326.5
Q ss_pred cceeEEcCC-CCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCC
Q psy7366 32 SYIGYCPQF-DALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 110 (566)
Q Consensus 32 ~~ig~v~Q~-~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~ 110 (566)
..|||+||+ +.+++.+||+||+.+.....+.+..+..+++.++++.+||+...++++.+|||||||||+||+||+.+|+
T Consensus 109 ~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~ 188 (520)
T TIGR03269 109 KRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQLSHRITHIARDLSGGEKQRVVLARQLAKEPF 188 (520)
T ss_pred hcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCcccCCHHHHHHHHHHHHHhcCCC
Confidence 469999998 6788889999999987655566666667889999999999988899999999999999999999999999
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCC
Q psy7366 111 LIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGN 189 (566)
Q Consensus 111 vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~ 189 (566)
+|||||||++||+.+++++.++|+++.+ .|.|||+||||++++.++||||++|++|+++..|+++++.....
T Consensus 189 lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~------- 261 (520)
T TIGR03269 189 LFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM------- 261 (520)
T ss_pred EEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH-------
Confidence 9999999999999999999999999865 59999999999999999999999999999998887766532100
Q ss_pred CCCCCCccchhHHHhhccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeee
Q psy7366 190 DLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLV 269 (566)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (566)
....
T Consensus 262 -------------~~~~--------------------------------------------------------------- 265 (520)
T TIGR03269 262 -------------EGVS--------------------------------------------------------------- 265 (520)
T ss_pred -------------hhch---------------------------------------------------------------
Confidence 0000
Q ss_pred eeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeE
Q psy7366 270 AVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLF 349 (566)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 349 (566)
... ... . ......+|+++|++
T Consensus 266 ----------------------------------------------~~~---~~~-----~-----~~~~~~~l~~~~l~ 286 (520)
T TIGR03269 266 ----------------------------------------------EVE---KEC-----E-----VEVGEPIIKVRNVS 286 (520)
T ss_pred ----------------------------------------------hhc---ccc-----c-----cCCCCceEEEeccE
Confidence 000 000 0 00012379999999
Q ss_pred EEeCC-cCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEc-Ccc---CCCc----hHHhcCc
Q psy7366 350 KIYAN-SKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVM-NHS---IRDS----MDLVRSY 420 (566)
Q Consensus 350 ~~y~~-~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~-g~~---~~~~----~~~~~~~ 420 (566)
+.|+. ..+.+.+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|+|.++ |.+ +... ....+++
T Consensus 287 ~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 366 (520)
T TIGR03269 287 KRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRY 366 (520)
T ss_pred EEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhh
Confidence 99952 1123569999999999999999999999999999999999999999999996 643 2211 1234567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----ccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----YSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
++|+||++.+++.+|+.||+.+.... ..+....+.++.++++.+++.. ..++++.+|||||||||+|||||+.+
T Consensus 367 i~~v~q~~~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~ 445 (520)
T TIGR03269 367 IGILHQEYDLYPHRTVLDNLTEAIGL-ELPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKE 445 (520)
T ss_pred EEEEccCcccCCCCcHHHHHHHHHHc-CCCHHHHHHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999899999999999875432 2233333456788999999964 57899999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||||+|||+.+++.++++|++++++ |.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 446 p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 515 (520)
T TIGR03269 446 PRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEI 515 (520)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999765 89999999999999999999999999999999988765
No 5
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1e-76 Score=653.53 Aligned_cols=429 Identities=23% Similarity=0.299 Sum_probs=342.9
Q ss_pred CCcchHHHHHhccccC-------CC-ccCCCCCcc---c----ccccceeEEcCCCC--CCCCCCHHHHHHHHHHh-cCC
Q psy7366 1 MGLTTTPKRVVTLLLT-------TQ-KVPGSNPTI---D----KNLSYIGYCPQFDA--LNDRLTPREHLEFYSRV-RNV 62 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~-------~~-~~~~~~~~~---~----~~~~~ig~v~Q~~~--l~~~~tv~e~l~~~~~~-~~~ 62 (566)
.||||++|+++|++.+ |+ .+.+..... . ...++|||+||++. +++.+|+.+++.+.... .+.
T Consensus 46 sGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (529)
T PRK15134 46 SGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGM 125 (529)
T ss_pred CcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCC
Confidence 5999999999999974 22 122222111 0 01246999999985 56678999998765432 245
Q ss_pred ChhhHHHHHHHHHHHcCCCc---ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC
Q psy7366 63 PSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE 139 (566)
Q Consensus 63 ~~~~~~~~~~~~l~~~gl~~---~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~ 139 (566)
+..+..+++.++++.+||++ ..++++.+|||||||||+||+||+.+|++|||||||++||+.+++++.++|++++++
T Consensus 126 ~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~ 205 (529)
T PRK15134 126 RREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE 205 (529)
T ss_pred CHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh
Confidence 55566788999999999975 358999999999999999999999999999999999999999999999999999765
Q ss_pred -CCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCC
Q psy7366 140 -GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSAR 218 (566)
Q Consensus 140 -g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (566)
|.|||+||||++++..+||||++|++|+++..|+++++...... .....+..
T Consensus 206 ~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~----------------~~~~~~~~----------- 258 (529)
T PRK15134 206 LNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQNRAATLFSAPTH----------------PYTQKLLN----------- 258 (529)
T ss_pred cCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeCCHHHHhhCCCC----------------HHHHHHHH-----------
Confidence 89999999999999999999999999999999988775421000 00000000
Q ss_pred cccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHH
Q psy7366 219 PEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINL 298 (566)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (566)
T Consensus 259 -------------------------------------------------------------------------------- 258 (529)
T PRK15134 259 -------------------------------------------------------------------------------- 258 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcC-------CCcceeeeeeEEEeC
Q psy7366 299 SIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSK-------GTKPAVNQISFGVGR 371 (566)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~-------~~~~~l~~isl~i~~ 371 (566)
. ... .... . .......+++++|+++.|+... +.+.+|+++||+|++
T Consensus 259 ---~-------------~~~--~~~~-----~----~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~ 311 (529)
T PRK15134 259 ---S-------------EPS--GDPV-----P----LPEPASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRP 311 (529)
T ss_pred ---h-------------Ccc--cccc-----c----cCCCCCCcccccCcEEEeecCccccccccccceeeecceeEEcC
Confidence 0 000 0000 0 0001123699999999995211 135799999999999
Q ss_pred CcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h---HHhcCceEEEecCC--CCCCCCCHHHHHHHHHH
Q psy7366 372 GECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M---DLVRSYIGYCPQFD--ALNDRLTPREHLEFYSR 445 (566)
Q Consensus 372 Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~---~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~ 445 (566)
||++||+||||||||||+|+|+|+++ ++|+|+++|+++... . ..++++++|+||++ .+++.+||.||+.+...
T Consensus 312 Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~ 390 (529)
T PRK15134 312 GETLGLVGESGSGKSTTGLALLRLIN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLR 390 (529)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCcCC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHH
Confidence 99999999999999999999999995 899999999887531 1 12356799999997 47888999999987643
Q ss_pred hcC--CCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q psy7366 446 VRN--VPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIER 522 (566)
Q Consensus 446 ~~~--~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~ 522 (566)
.+. .+....++.+.++++.+++. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|++
T Consensus 391 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~ 470 (529)
T PRK15134 391 VHQPTLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKS 470 (529)
T ss_pred hccccCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHH
Confidence 321 23333456788999999997 568999999999999999999999999999999999999999999999999999
Q ss_pred HHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 523 AVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 523 ~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++++ |.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 471 ~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 513 (529)
T PRK15134 471 LQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERV 513 (529)
T ss_pred HHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHH
Confidence 9875 89999999999999999999999999999999988765
No 6
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-77 Score=653.73 Aligned_cols=423 Identities=22% Similarity=0.344 Sum_probs=338.9
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc----cccccceeEEcCCCCCCCCCCHHHHHHHHHHh----cCC---Chhh
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI----DKNLSYIGYCPQFDALNDRLTPREHLEFYSRV----RNV---PSVL 66 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~----~~~---~~~~ 66 (566)
.||||++|++.|++.|.. .+.+..... .....+|||+||++.+++.+||.||+.+.... .+. +..+
T Consensus 42 sGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 121 (510)
T PRK09700 42 AGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWRE 121 (510)
T ss_pred CCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHH
Confidence 599999999999987644 123322111 11224699999999999999999999875321 121 2334
Q ss_pred HHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEe
Q psy7366 67 LNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILT 146 (566)
Q Consensus 67 ~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviii 146 (566)
..+++.++++.+||....++++.+|||||||||+||+||+.+|++|||||||++||+.++.++.++|++++++|+|||++
T Consensus 122 ~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiiv 201 (510)
T PRK09700 122 MRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYI 201 (510)
T ss_pred HHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 56788999999999988899999999999999999999999999999999999999999999999999998789999999
Q ss_pred cCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccc
Q psy7366 147 SHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYN 226 (566)
Q Consensus 147 sH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (566)
|||++++..+||||++|++|++++.|+++++... +....+.... ..
T Consensus 202 sHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~-------------------~~~~~~~~~~---~~------------ 247 (510)
T PRK09700 202 SHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSND-------------------DIVRLMVGRE---LQ------------ 247 (510)
T ss_pred eCCHHHHHHhCCEEEEEECCEEeeecchhhCCHH-------------------HHHHHhcCCC---cc------------
Confidence 9999999999999999999999988887654211 0000000000 00
Q ss_pred cccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy7366 227 ENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFS 306 (566)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (566)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHH
Q psy7366 307 RCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKT 386 (566)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKS 386 (566)
......... . .......+++++|+++.|+ .+|+|+||+|++||+++|+||||||||
T Consensus 248 --------~~~~~~~~~------~----~~~~~~~~l~~~~l~~~~~------~~l~~isl~i~~Ge~~~l~G~NGsGKS 303 (510)
T PRK09700 248 --------NRFNAMKEN------V----SNLAHETVFEVRNVTSRDR------KKVRDISFSVCRGEILGFAGLVGSGRT 303 (510)
T ss_pred --------ccccccccc------c----ccCCCCcEEEEeCccccCC------CcccceeEEEcCCcEEEEECCCCCCHH
Confidence 000000000 0 0001123799999998652 389999999999999999999999999
Q ss_pred HHHHHHHCCCCCCccEEEEcCccCCCc--hHHhcCceEEEecC---CCCCCCCCHHHHHHHHHHhc--------CC-Cch
Q psy7366 387 TTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVRSYIGYCPQF---DALNDRLTPREHLEFYSRVR--------NV-PSV 452 (566)
Q Consensus 387 TLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~~~i~~v~q~---~~l~~~~tv~e~l~~~~~~~--------~~-~~~ 452 (566)
||+|+|+|+++|++|+|+++|+++... ....+++++|+||+ +.+++++|+.||+.+..... +. ...
T Consensus 304 TLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~ 383 (510)
T PRK09700 304 ELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEV 383 (510)
T ss_pred HHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChH
Confidence 999999999999999999999887532 23446689999998 46888999999997643210 11 122
Q ss_pred HHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEE
Q psy7366 453 LLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVI 531 (566)
Q Consensus 453 ~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl 531 (566)
.....+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|++++++|.|||
T Consensus 384 ~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi 463 (510)
T PRK09700 384 DEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVIL 463 (510)
T ss_pred HHHHHHHHHHHhcCCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 2345678999999997 778999999999999999999999999999999999999999999999999999987899999
Q ss_pred EEccCHHHHHhhCCEEEEEECCEEEEecCc
Q psy7366 532 LTSHNMEECEALCTKLTIMVNGQFTCLGSA 561 (566)
Q Consensus 532 ~vsHd~~~~~~~~drv~~l~~G~i~~~g~~ 561 (566)
++|||++++..+|||+++|++|+++..++.
T Consensus 464 ~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~ 493 (510)
T PRK09700 464 MVSSELPEIITVCDRIAVFCEGRLTQILTN 493 (510)
T ss_pred EEcCCHHHHHhhCCEEEEEECCEEEEEecC
Confidence 999999999999999999999999988765
No 7
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2e-76 Score=647.18 Aligned_cols=419 Identities=25% Similarity=0.339 Sum_probs=338.7
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc----cccccceeEEcCCCCCCCCCCHHHHHHHHHHhc---C-CChhhHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI----DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR---N-VPSVLLNT 69 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~---~-~~~~~~~~ 69 (566)
.||||++|+++|++.|+.. +.+..... ....+.|||++|++.+++.+||+||+.++.... + .+..+.++
T Consensus 41 sGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 120 (501)
T PRK10762 41 AGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA 120 (501)
T ss_pred CCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH
Confidence 5999999999999976541 23322110 111346999999999999999999998864332 1 23344567
Q ss_pred HHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCC
Q psy7366 70 IVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHN 149 (566)
Q Consensus 70 ~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~ 149 (566)
++.++++.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.++++++++|++++++|.|||++|||
T Consensus 121 ~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd 200 (501)
T PRK10762 121 EADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHR 200 (501)
T ss_pred HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 78999999999988899999999999999999999999999999999999999999999999999998779999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCccccccccccc
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENI 229 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (566)
++++..+||||++|++|+++..|+++++... ...+.....
T Consensus 201 ~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-------------------~~~~~~~~~--------------------- 240 (501)
T PRK10762 201 LKEIFEICDDVTVFRDGQFIAEREVADLTED-------------------SLIEMMVGR--------------------- 240 (501)
T ss_pred HHHHHHhCCEEEEEeCCEEEEecCcCcCCHH-------------------HHHHHhcCC---------------------
Confidence 9999999999999999999987765542110 000000000
Q ss_pred CCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy7366 230 DGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCF 309 (566)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (566)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHH
Q psy7366 310 TRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTF 389 (566)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl 389 (566)
... ...+ ... ......+++++|+++ .+|+++||+|.+||+++|+||||||||||+
T Consensus 241 ------~~~--~~~~-----~~~---~~~~~~~l~~~~l~~---------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl 295 (501)
T PRK10762 241 ------KLE--DQYP-----RLD---KAPGEVRLKVDNLSG---------PGVNDVSFTLRKGEILGVSGLMGAGRTELM 295 (501)
T ss_pred ------Ccc--cccc-----ccc---cCCCCcEEEEeCccc---------CCcccceEEEcCCcEEEEecCCCCCHHHHH
Confidence 000 0000 000 001123689999973 269999999999999999999999999999
Q ss_pred HHHHCCCCCCccEEEEcCccCCCc--hHHhcCceEEEecCC---CCCCCCCHHHHHHHHHH--hc---C-CCchHHHHHH
Q psy7366 390 KMLTGAIKPTSGNAYVMNHSIRDS--MDLVRSYIGYCPQFD---ALNDRLTPREHLEFYSR--VR---N-VPSVLLNTIV 458 (566)
Q Consensus 390 ~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~~~i~~v~q~~---~l~~~~tv~e~l~~~~~--~~---~-~~~~~~~~~~ 458 (566)
|+|+|+++|++|+|.++|+++... ....++++||+||++ .+++.+|+.||+.+... .. + .......+.+
T Consensus 296 ~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~ 375 (501)
T PRK10762 296 KVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAV 375 (501)
T ss_pred HHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHH
Confidence 999999999999999999887542 233566899999996 57888999999976421 11 1 1222334568
Q ss_pred HHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCH
Q psy7366 459 NESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNM 537 (566)
Q Consensus 459 ~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~ 537 (566)
.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||+
T Consensus 376 ~~~l~~~~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~ 455 (501)
T PRK10762 376 SDFIRLFNIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEM 455 (501)
T ss_pred HHHHHhcCCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 8999999995 678999999999999999999999999999999999999999999999999999987899999999999
Q ss_pred HHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 538 EECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 538 ~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+++..+||++++|++|+++..++++++
T Consensus 456 ~~~~~~~d~v~~l~~G~i~~~~~~~~~ 482 (501)
T PRK10762 456 PEVLGMSDRILVMHEGRISGEFTREQA 482 (501)
T ss_pred HHHHhhCCEEEEEECCEEEEEeccccC
Confidence 999999999999999999999987765
No 8
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.9e-76 Score=647.74 Aligned_cols=427 Identities=21% Similarity=0.300 Sum_probs=338.8
Q ss_pred CCcchHHHHHhccccC----CC-ccCCCCCcc----cccccceeEEcCCCCCCCCCCHHHHHHHHHHhc--C--CChhhH
Q psy7366 1 MGLTTTPKRVVTLLLT----TQ-KVPGSNPTI----DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR--N--VPSVLL 67 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~----~~-~~~~~~~~~----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~--~--~~~~~~ 67 (566)
.||||++|+++|++.+ |+ .+.+..... .....+||||||++.+++.+||.||+.+..... + .+..+.
T Consensus 38 sGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~ 117 (500)
T TIGR02633 38 AGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAM 117 (500)
T ss_pred CCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHH
Confidence 5999999999999865 22 122221111 011346999999999999999999998764322 1 233455
Q ss_pred HHHHHHHHHHcCCCccc-ccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEe
Q psy7366 68 NTIVNESLNKFALGHYS-DREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILT 146 (566)
Q Consensus 68 ~~~~~~~l~~~gl~~~~-~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviii 146 (566)
.+++.++++.+|+.... ++++.+|||||||||+||+||+.+|++|||||||++||+.+++++.++|++++++|.|||++
T Consensus 118 ~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviii 197 (500)
T TIGR02633 118 YLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYI 197 (500)
T ss_pred HHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 67889999999998654 67899999999999999999999999999999999999999999999999998889999999
Q ss_pred cCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccc
Q psy7366 147 SHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYN 226 (566)
Q Consensus 147 sH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (566)
|||++++..+||+|++|++|+++..|+++++... .....+...
T Consensus 198 tHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-------------------~~~~~~~~~------------------ 240 (500)
T TIGR02633 198 SHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED-------------------DIITMMVGR------------------ 240 (500)
T ss_pred eCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH-------------------HHHHHHhCc------------------
Confidence 9999999999999999999999877654321100 000000000
Q ss_pred cccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy7366 227 ENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFS 306 (566)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (566)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T TIGR02633 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHH
Q psy7366 307 RCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKT 386 (566)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKS 386 (566)
......... . ......+|+++|+++.|+.+ +++.+|+|+||+|++||+++|+||||||||
T Consensus 241 ---------~~~~~~~~~-----~-----~~~~~~~l~~~~l~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~NGsGKS 300 (500)
T TIGR02633 241 ---------EITSLYPHE-----P-----HEIGDVILEARNLTCWDVIN-PHRKRVDDVSFSLRRGEILGVAGLVGAGRT 300 (500)
T ss_pred ---------ccccccccc-----c-----cCCCCceEEEeCCccccccc-ccccccccceeEEeCCcEEEEeCCCCCCHH
Confidence 000000000 0 00112379999999988311 134699999999999999999999999999
Q ss_pred HHHHHHHCCCCC-CccEEEEcCccCCC--chHHhcCceEEEecCC---CCCCCCCHHHHHHHHHH--hc---CCCchHHH
Q psy7366 387 TTFKMLTGAIKP-TSGNAYVMNHSIRD--SMDLVRSYIGYCPQFD---ALNDRLTPREHLEFYSR--VR---NVPSVLLN 455 (566)
Q Consensus 387 TLl~~i~G~~~~-~~G~i~~~g~~~~~--~~~~~~~~i~~v~q~~---~l~~~~tv~e~l~~~~~--~~---~~~~~~~~ 455 (566)
||+|+|+|+++| ++|+|.++|+++.. .....+++++|+||++ .+++++|+.+|+.+... .. .......+
T Consensus 301 TLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~ 380 (500)
T TIGR02633 301 ELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAEL 380 (500)
T ss_pred HHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHH
Confidence 999999999995 89999999998753 2234567899999996 58889999999976431 11 11222334
Q ss_pred HHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEc
Q psy7366 456 TIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTS 534 (566)
Q Consensus 456 ~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vs 534 (566)
..+.++++.+++.. ..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|
T Consensus 381 ~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivs 460 (500)
T TIGR02633 381 QIIGSAIQRLKVKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVS 460 (500)
T ss_pred HHHHHHHHhcCccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEEC
Confidence 56889999999974 67999999999999999999999999999999999999999999999999999988899999999
Q ss_pred cCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 535 HNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 535 Hd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||++++..+|||+++|++|++++.++.+++
T Consensus 461 Hd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 461 SELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 999999999999999999999988865543
No 9
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.5e-75 Score=637.95 Aligned_cols=427 Identities=21% Similarity=0.307 Sum_probs=338.0
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc----cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI----DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNE 73 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 73 (566)
.||||++|++.|++.|.+ .+.+..... ......|||++|++.+++.+||.||+.+.... ..+.++++.+
T Consensus 48 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~----~~~~~~~~~~ 123 (510)
T PRK15439 48 AGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK----RQASMQKMKQ 123 (510)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc----chHHHHHHHH
Confidence 599999999999987655 133322111 11124699999999999999999999875321 2345577899
Q ss_pred HHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHH
Q psy7366 74 SLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEEC 153 (566)
Q Consensus 74 ~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~ 153 (566)
+++.+|++...++++.+|||||||||+||+||+.+|++|||||||++||+.+++++.++|++++++|+|||++|||++++
T Consensus 124 ~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~ 203 (510)
T PRK15439 124 LLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEI 203 (510)
T ss_pred HHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 99999999888999999999999999999999999999999999999999999999999999987899999999999999
Q ss_pred HhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccccccCCcc
Q psy7366 154 EALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENIDGKN 233 (566)
Q Consensus 154 ~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (566)
..+||||++|++|+++..|+++++.... ....+...... .. .....
T Consensus 204 ~~~~d~i~~l~~G~i~~~g~~~~~~~~~-------------------~~~~~~~~~~~--~~-----~~~~~-------- 249 (510)
T PRK15439 204 RQLADRISVMRDGTIALSGKTADLSTDD-------------------IIQAITPAARE--KS-----LSASQ-------- 249 (510)
T ss_pred HHhCCEEEEEECCEEEEecChHHcCHHH-------------------HHHHHhCcccc--cc-----ccccc--------
Confidence 9999999999999999999887653210 00000000000 00 00000
Q ss_pred chhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy7366 234 LTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSN 313 (566)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (566)
. .
T Consensus 250 ---------------------------------------------------------------------~---------~ 251 (510)
T PRK15439 250 ---------------------------------------------------------------------K---------L 251 (510)
T ss_pred ---------------------------------------------------------------------c---------c
Confidence 0 0
Q ss_pred cCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHH
Q psy7366 314 LHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLT 393 (566)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~ 393 (566)
....+.. . . .......+++++|+++ .+|+++||+|++|+++||+||||||||||+|+|+
T Consensus 252 ~~~~~~~--~------~----~~~~~~~~l~~~~l~~---------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~ 310 (510)
T PRK15439 252 WLELPGN--R------R----QQAAGAPVLTVEDLTG---------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLY 310 (510)
T ss_pred ccccccc--c------c----ccCCCCceEEEeCCCC---------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHc
Confidence 0000000 0 0 0001124799999973 1599999999999999999999999999999999
Q ss_pred CCCCCCccEEEEcCccCCCc--hHHhcCceEEEecCC---CCCCCCCHHHHHHHHHH--h-cCCCchHHHHHHHHHHHHc
Q psy7366 394 GAIKPTSGNAYVMNHSIRDS--MDLVRSYIGYCPQFD---ALNDRLTPREHLEFYSR--V-RNVPSVLLNTIVNESLNKF 465 (566)
Q Consensus 394 G~~~~~~G~i~~~g~~~~~~--~~~~~~~i~~v~q~~---~l~~~~tv~e~l~~~~~--~-~~~~~~~~~~~~~~~l~~~ 465 (566)
|+++|++|+|.++|+++... ....+.+++|+||++ .+++.+|+.+|+..... . ........++.+.++++.+
T Consensus 311 Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 390 (510)
T PRK15439 311 GLRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRAL 390 (510)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHc
Confidence 99999999999999987542 223456899999984 48888999999864211 1 1111222345678999999
Q ss_pred CCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhC
Q psy7366 466 ALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALC 544 (566)
Q Consensus 466 ~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~ 544 (566)
++. ...++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||++++..+|
T Consensus 391 ~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~ 470 (510)
T PRK15439 391 NIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMA 470 (510)
T ss_pred CCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhC
Confidence 997 6789999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred CEEEEEECCEEEEecCcccc
Q psy7366 545 TKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 545 drv~~l~~G~i~~~g~~~~l 564 (566)
||+++|++|+++..|+++++
T Consensus 471 d~i~~l~~G~i~~~~~~~~~ 490 (510)
T PRK15439 471 DRVLVMHQGEISGALTGAAI 490 (510)
T ss_pred CEEEEEECCEEEEEEccccC
Confidence 99999999999999988765
No 10
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-75 Score=637.02 Aligned_cols=421 Identities=24% Similarity=0.305 Sum_probs=335.6
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc----cccccceeEEcCCCCCCCCCCHHHHHHHHHH--hcC-CChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI----DKNLSYIGYCPQFDALNDRLTPREHLEFYSR--VRN-VPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~--~~~-~~~~~~~~~ 70 (566)
.||||++|+++|++.|.+. +.+..... .....+|||+||++.+++.+||.||+.+... ..+ .+..+..++
T Consensus 41 sGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~ 120 (501)
T PRK11288 41 AGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYE 120 (501)
T ss_pred CCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHH
Confidence 5999999999999866441 22221110 1123579999999999999999999987532 122 234456678
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCCh
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNM 150 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~ 150 (566)
+.++++.+|++...++++.+||||||||++||+||+.+|+||||||||++||+.+++++.++|++++++|+|||++|||+
T Consensus 121 ~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~ 200 (501)
T PRK11288 121 AREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRM 200 (501)
T ss_pred HHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 89999999998888999999999999999999999999999999999999999999999999999987899999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccccccC
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENID 230 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (566)
+++..+||||++|++|+++..++..... ....+...+...
T Consensus 201 ~~~~~~~d~i~~l~~G~i~~~~~~~~~~------------------~~~~~~~~~~~~---------------------- 240 (501)
T PRK11288 201 EEIFALCDAITVFKDGRYVATFDDMAQV------------------DRDQLVQAMVGR---------------------- 240 (501)
T ss_pred HHHHHhCCEEEEEECCEEEeecCccccC------------------CHHHHHHHhcCC----------------------
Confidence 9999999999999999998654321000 000000000000
Q ss_pred CccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy7366 231 GKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFT 310 (566)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (566)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHH
Q psy7366 311 RSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFK 390 (566)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~ 390 (566)
......... . .......+++++++. ..+++|+||+|++||+++|+||||||||||+|
T Consensus 241 -----~~~~~~~~~-----~-----~~~~~~~l~~~~~~~--------~~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk 297 (501)
T PRK11288 241 -----EIGDIYGYR-----P-----RPLGEVRLRLDGLKG--------PGLREPISFSVRAGEIVGLFGLVGAGRSELMK 297 (501)
T ss_pred -----Ccccccccc-----c-----cCCCCcEEEEecccc--------CCcccceeEEEeCCcEEEEEcCCCCCHHHHHH
Confidence 000000000 0 000123588999872 24899999999999999999999999999999
Q ss_pred HHHCCCCCCccEEEEcCccCCC--chHHhcCceEEEecCC---CCCCCCCHHHHHHHHHHhc----C--CCchHHHHHHH
Q psy7366 391 MLTGAIKPTSGNAYVMNHSIRD--SMDLVRSYIGYCPQFD---ALNDRLTPREHLEFYSRVR----N--VPSVLLNTIVN 459 (566)
Q Consensus 391 ~i~G~~~~~~G~i~~~g~~~~~--~~~~~~~~i~~v~q~~---~l~~~~tv~e~l~~~~~~~----~--~~~~~~~~~~~ 459 (566)
+|+|+++|++|+|+++|+++.. .....+++++|+||++ .+++.+|+.||+.+..... + ......++.+.
T Consensus 298 ~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (501)
T PRK11288 298 LLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENAD 377 (501)
T ss_pred HHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHH
Confidence 9999999999999999988753 2234567899999996 4888899999987643211 1 11222345678
Q ss_pred HHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHH
Q psy7366 460 ESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 538 (566)
Q Consensus 460 ~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~ 538 (566)
++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||++
T Consensus 378 ~~l~~~~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~ 457 (501)
T PRK11288 378 RFIRSLNIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP 457 (501)
T ss_pred HHHHhcCcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH
Confidence 999999994 6789999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred HHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 539 ECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 539 ~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++..+||++++|++|++++.|++++.
T Consensus 458 ~~~~~~d~i~~l~~g~i~~~~~~~~~ 483 (501)
T PRK11288 458 EVLGVADRIVVMREGRIAGELAREQA 483 (501)
T ss_pred HHHhhCCEEEEEECCEEEEEEccccC
Confidence 99999999999999999999987764
No 11
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-75 Score=634.81 Aligned_cols=421 Identities=20% Similarity=0.282 Sum_probs=336.0
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc----cccccceeEEcCCCCCCCCCCHHHHHHHHHH-hcC--CChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI----DKNLSYIGYCPQFDALNDRLTPREHLEFYSR-VRN--VPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~-~~~--~~~~~~~~~ 70 (566)
+||||++|+++|++.|.+ .+.+..... ......|||+||++.+++.+||.||+.+... ..+ .+..+..++
T Consensus 35 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~ 114 (491)
T PRK10982 35 AGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRD 114 (491)
T ss_pred CCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCCCHHHHhhcccccccccccCHHHHHHH
Confidence 599999999999987654 123321110 1123569999999999999999999987532 112 233445668
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCCh
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNM 150 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~ 150 (566)
+.++++.+|+....++++.+|||||||||+||+||+.+|++|||||||++||+.++++++++|++++++|.|||++|||+
T Consensus 115 ~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~ 194 (491)
T PRK10982 115 TKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKM 194 (491)
T ss_pred HHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCH
Confidence 89999999999888999999999999999999999999999999999999999999999999999987899999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccccccC
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENID 230 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (566)
+++..+||||++|++|+++..|+++++... +....+...
T Consensus 195 ~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-------------------~~~~~~~~~---------------------- 233 (491)
T PRK10982 195 EEIFQLCDEITILRDGQWIATQPLAGLTMD-------------------KIIAMMVGR---------------------- 233 (491)
T ss_pred HHHHHhCCEEEEEECCEEEeecChhhCCHH-------------------HHHHHHhCC----------------------
Confidence 999999999999999999988776542100 000000000
Q ss_pred CccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy7366 231 GKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFT 310 (566)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (566)
T Consensus 234 -------------------------------------------------------------------------------- 233 (491)
T PRK10982 234 -------------------------------------------------------------------------------- 233 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHH
Q psy7366 311 RSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFK 390 (566)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~ 390 (566)
. ... ..+. . .......+|+++|+++.+ +.+|+++||+|++||++||+||||||||||++
T Consensus 234 --~---~~~-~~~~-----~----~~~~~~~~i~~~~l~~~~------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~ 292 (491)
T PRK10982 234 --S---LTQ-RFPD-----K----ENKPGEVILEVRNLTSLR------QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVE 292 (491)
T ss_pred --C---ccc-cccc-----c----cCCCCCcEEEEeCccccc------CcccceeeEEEeCCcEEEEecCCCCCHHHHHH
Confidence 0 000 0000 0 000112369999998863 24899999999999999999999999999999
Q ss_pred HHHCCCCCCccEEEEcCccCCCc--hHHhcCceEEEecCC---CCCCCCCHHHHHHH-----HHHhcCC-CchHHHHHHH
Q psy7366 391 MLTGAIKPTSGNAYVMNHSIRDS--MDLVRSYIGYCPQFD---ALNDRLTPREHLEF-----YSRVRNV-PSVLLNTIVN 459 (566)
Q Consensus 391 ~i~G~~~~~~G~i~~~g~~~~~~--~~~~~~~i~~v~q~~---~l~~~~tv~e~l~~-----~~~~~~~-~~~~~~~~~~ 459 (566)
+|+|+.+|++|+|+++|+++... ....++.++|+||++ .+++++|+.+|..+ .....+. ......+.+.
T Consensus 293 ~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (491)
T PRK10982 293 TLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQ 372 (491)
T ss_pred HHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHH
Confidence 99999999999999999887542 233467799999984 47888888877322 1111121 2233455678
Q ss_pred HHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHH
Q psy7366 460 ESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 538 (566)
Q Consensus 460 ~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~ 538 (566)
++++.+++. +..++++.+|||||||||+|||||+.+|+||||||||+|||+.+++.++++|+++.++|.|||++|||++
T Consensus 373 ~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~ 452 (491)
T PRK10982 373 WVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP 452 (491)
T ss_pred HHHHhcCccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH
Confidence 899999995 5679999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred HHHhhCCEEEEEECCEEEEecCccc
Q psy7366 539 ECEALCTKLTIMVNGQFTCLGSATH 563 (566)
Q Consensus 539 ~~~~~~drv~~l~~G~i~~~g~~~~ 563 (566)
++..+|||+++|++|+++..++.++
T Consensus 453 ~~~~~~d~v~~l~~g~i~~~~~~~~ 477 (491)
T PRK10982 453 ELLGITDRILVMSNGLVAGIVDTKT 477 (491)
T ss_pred HHHhhCCEEEEEECCEEEEEEcccc
Confidence 9999999999999999998876543
No 12
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=4.6e-73 Score=565.80 Aligned_cols=429 Identities=24% Similarity=0.331 Sum_probs=355.6
Q ss_pred CCcchHHHHHhccccCCCccCCCCCc----------cc-----ccccceeEEcCCC--CCCCCCCHHHHHHHHHHh-cCC
Q psy7366 1 MGLTTTPKRVVTLLLTTQKVPGSNPT----------ID-----KNLSYIGYCPQFD--ALNDRLTPREHLEFYSRV-RNV 62 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~~~~~~~~----------~~-----~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~-~~~ 62 (566)
+|||-|.+++++++-....+..++.. .+ -+..+|+|+||+| +|.|-.|+...+.-.... +++
T Consensus 47 SGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~ 126 (534)
T COG4172 47 SGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGL 126 (534)
T ss_pred CCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcc
Confidence 59999999999998653322222110 00 1234799999999 677888999888766554 578
Q ss_pred ChhhHHHHHHHHHHHcCCCc---ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC
Q psy7366 63 PSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE 139 (566)
Q Consensus 63 ~~~~~~~~~~~~l~~~gl~~---~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~ 139 (566)
+..+.++++-++|+.+|+.+ .++.++++|||||||||+||.||+.+|++||-||||++||..-+.++.++|++|.++
T Consensus 127 ~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~ 206 (534)
T COG4172 127 SRAAARARALELLELVGIPEPEKRLDAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE 206 (534)
T ss_pred cHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH
Confidence 89999999999999999985 468999999999999999999999999999999999999999999999999999655
Q ss_pred -CCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCC
Q psy7366 140 -GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSAR 218 (566)
Q Consensus 140 -g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (566)
|.++++||||+.-+..++|||+||++|++++.|..+++.+... +|+. +.+-..
T Consensus 207 ~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t~~lF~~Pq-HpYT---------------r~Ll~a---------- 260 (534)
T COG4172 207 LGMAILFITHDLGIVRKFADRVYVMQHGEIVETGTTETLFAAPQ-HPYT---------------RKLLAA---------- 260 (534)
T ss_pred hCcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcHHHHhhCCC-ChHH---------------HHHHhc----------
Confidence 9999999999999999999999999999999999888765321 1110 000000
Q ss_pred cccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHH
Q psy7366 219 PEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINL 298 (566)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (566)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCC-------CcceeeeeeEEEeC
Q psy7366 299 SIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKG-------TKPAVNQISFGVGR 371 (566)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~-------~~~~l~~isl~i~~ 371 (566)
++. ......+......++++++...|.-..| ...+++++||++++
T Consensus 261 -----------------------eP~-----g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~ 312 (534)
T COG4172 261 -----------------------EPS-----GDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRR 312 (534)
T ss_pred -----------------------CCC-----CCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecC
Confidence 000 0000001112346888898888854221 24589999999999
Q ss_pred CcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC----chHHhcCceEEEecCC--CCCCCCCHHHHHHHHHH
Q psy7366 372 GECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD----SMDLVRSYIGYCPQFD--ALNDRLTPREHLEFYSR 445 (566)
Q Consensus 372 Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~----~~~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~ 445 (566)
|+.+||+|.+|||||||-.+|.+++++. |+|.|+|+++.. ....+|+++-.||||| ++.|.|||.+.|.-+..
T Consensus 313 gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~ 391 (534)
T COG4172 313 GQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLR 391 (534)
T ss_pred CCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhh
Confidence 9999999999999999999999999886 999999999964 2345788999999998 48999999999988776
Q ss_pred hcC--CCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q psy7366 446 VRN--VPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIER 522 (566)
Q Consensus 446 ~~~--~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~ 522 (566)
.+. .+..+..+++.++|+.+||+ ...+++|.++|||||||++|||||+.+|++++||||||+||...+.++.++|++
T Consensus 392 vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~ 471 (534)
T COG4172 392 VHEPKLSAAERDQRVIEALEEVGLDPATRNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRD 471 (534)
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCChhHhhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHH
Confidence 653 44556677899999999997 467999999999999999999999999999999999999999999999999999
Q ss_pred HHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 523 AVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 523 ~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++++ |.+-++||||+..+..+||+|+||++|+|+++|+.+++
T Consensus 472 LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~i 514 (534)
T COG4172 472 LQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAV 514 (534)
T ss_pred HHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHH
Confidence 9866 99999999999999999999999999999999998765
No 13
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.4e-72 Score=613.85 Aligned_cols=420 Identities=20% Similarity=0.281 Sum_probs=323.1
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc---cccccceeEEcCCCCCC---C-----CCCHHHHHHHHHHhcCCChhh
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI---DKNLSYIGYCPQFDALN---D-----RLTPREHLEFYSRVRNVPSVL 66 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~---~~~~~~ig~v~Q~~~l~---~-----~~tv~e~l~~~~~~~~~~~~~ 66 (566)
.||||++|+++|++.+++. +.+..... ......+||++|++.+. . .+||.|++.+. ..
T Consensus 40 sGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 111 (490)
T PRK10938 40 SGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDE--------VK 111 (490)
T ss_pred CCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhceeccCcchhhcccchhhccccHHHhcccc--------hh
Confidence 5999999999999876541 22221111 11124599999987531 1 46888877532 12
Q ss_pred HHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEe
Q psy7366 67 LNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILT 146 (566)
Q Consensus 67 ~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviii 146 (566)
.++++.++++.+||+...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|.|||++
T Consensus 112 ~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~ 191 (490)
T PRK10938 112 DPARCEQLAQQFGITALLDRRFKYLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLV 191 (490)
T ss_pred HHHHHHHHHHHcCCHhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 35678899999999988899999999999999999999999999999999999999999999999999998789999999
Q ss_pred cCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccc
Q psy7366 147 SHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYN 226 (566)
Q Consensus 147 sH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (566)
||+++++.++||+|++|++|+++..|+++++..... .. .+..... ....
T Consensus 192 tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~------------------~~-~~~~~~~--~~~~---------- 240 (490)
T PRK10938 192 LNRFDEIPDFVQFAGVLADCTLAETGEREEILQQAL------------------VA-QLAHSEQ--LEGV---------- 240 (490)
T ss_pred eCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcchh------------------hh-hhhhhhc--cCcc----------
Confidence 999999999999999999999999988876532100 00 0000000 0000
Q ss_pred cccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy7366 227 ENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFS 306 (566)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (566)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHH
Q psy7366 307 RCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKT 386 (566)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKS 386 (566)
..+..... .. .. .......+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||
T Consensus 241 ---------~~~~~~~~-~~--~~----~~~~~~~~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~i~G~NGsGKS 300 (490)
T PRK10938 241 ---------QLPEPDEP-SA--RH----ALPANEPRIVLNNGVVSYN----DRPILHNLSWQVNPGEHWQIVGPNGAGKS 300 (490)
T ss_pred ---------ccCccccc-cc--cc----ccCCCCceEEEeceEEEEC----CeeEEeeceEEEcCCCEEEEECCCCCCHH
Confidence 00000000 00 00 0001234799999999996 45699999999999999999999999999
Q ss_pred HHHHHHHCCCCC-CccEEEEcCccCCC--chHHhcCceEEEecCCCCCC--CCCHHHHHHHHHH----hcCCCchHHHHH
Q psy7366 387 TTFKMLTGAIKP-TSGNAYVMNHSIRD--SMDLVRSYIGYCPQFDALND--RLTPREHLEFYSR----VRNVPSVLLNTI 457 (566)
Q Consensus 387 TLl~~i~G~~~~-~~G~i~~~g~~~~~--~~~~~~~~i~~v~q~~~l~~--~~tv~e~l~~~~~----~~~~~~~~~~~~ 457 (566)
||+|+|+|+.+| ++|+|+++|+++.. .....+++++|++|++.++. ..++.+++.+... .........++.
T Consensus 301 TLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (490)
T PRK10938 301 TLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKL 380 (490)
T ss_pred HHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHH
Confidence 999999998876 69999999987632 22234668999999876543 3467666543211 111112223456
Q ss_pred HHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-cEEEEEcc
Q psy7366 458 VNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEG-RCVILTSH 535 (566)
Q Consensus 458 ~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g-~tvl~vsH 535 (566)
+.++++.+++.+ ..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|+++++++ .|||++||
T Consensus 381 ~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsH 460 (490)
T PRK10938 381 AQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSH 460 (490)
T ss_pred HHHHHHHcCCchhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 889999999987 8899999999999999999999999999999999999999999999999999998775 57999999
Q ss_pred CHHHHHh-hCCEEEEEECCEEEEec
Q psy7366 536 NMEECEA-LCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 536 d~~~~~~-~~drv~~l~~G~i~~~g 559 (566)
|++++.. +||++++|++|+++..-
T Consensus 461 d~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 461 HAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred chhhhhhhhheeEEEecCCceEEee
Confidence 9999987 59999999999987654
No 14
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-71 Score=582.39 Aligned_cols=419 Identities=24% Similarity=0.322 Sum_probs=348.7
Q ss_pred CCcchHHHHHhccccCCC--------ccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcC----CChhhHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ--------KVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRN----VPSVLLN 68 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~--------~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~----~~~~~~~ 68 (566)
.||||++|.+.|++.|+. ++...++. ++...+|++|+|++.+++++||.||+.++.+... +++..+.
T Consensus 45 AGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~-~A~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~ 123 (500)
T COG1129 45 AGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPR-DALAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMR 123 (500)
T ss_pred CCHHHHHHHHhCcccCCCceEEECCEEccCCCHH-HHHhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHH
Confidence 499999999999998777 23333333 3455789999999999999999999987665432 6788899
Q ss_pred HHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecC
Q psy7366 69 TIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSH 148 (566)
Q Consensus 69 ~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH 148 (566)
+++.++|+.+|+...+++++.+||.||||.|+||+||..+++|||||||||+|++...+.|++++++|+++|.+||+|||
T Consensus 124 ~~A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISH 203 (500)
T COG1129 124 RRARELLARLGLDIDPDTLVGDLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISH 203 (500)
T ss_pred HHHHHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcC
Confidence 99999999999976699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHhhcCEEEEEeCCEEEEecCh-hHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCccccccccc
Q psy7366 149 NMEECEALCTKLTIMVNGQFTCLGSA-THLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNE 227 (566)
Q Consensus 149 ~~~~~~~~~d~i~vl~~G~i~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (566)
+++|+.++||||+||++|+++...+. .++. ..++.+.+.+..
T Consensus 204 rl~Ei~~i~DritVlRDG~~v~~~~~~~~~~-------------------~~~lv~~MvGr~------------------ 246 (500)
T COG1129 204 RLDEVFEIADRITVLRDGRVVGTRPTAAETS-------------------EDELVRLMVGRE------------------ 246 (500)
T ss_pred cHHHHHHhcCEEEEEeCCEEeeecccccCCC-------------------HHHHHHHhhCcc------------------
Confidence 99999999999999999999976652 3211 111111111100
Q ss_pred ccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy7366 228 NIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSR 307 (566)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (566)
+
T Consensus 247 -------------------------------------------------------~------------------------ 247 (500)
T COG1129 247 -------------------------------------------------------L------------------------ 247 (500)
T ss_pred -------------------------------------------------------h------------------------
Confidence 0
Q ss_pred hhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHH
Q psy7366 308 CFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTT 387 (566)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKST 387 (566)
... ... . .........+++++++.. ..++|+||++++|||+||.|-=|||+|.
T Consensus 248 --------------~~~---~~~-~-~~~~~~~~~l~v~~l~~~--------~~~~dvSf~vr~GEIlGiaGLvGaGRTE 300 (500)
T COG1129 248 --------------EDL---FPE-P-PEEGIGEPVLEVRNLSGG--------GKVRDVSFTVRAGEILGIAGLVGAGRTE 300 (500)
T ss_pred --------------hhh---ccc-c-cccCCCCcEEEEecCCCC--------CceeCceeEEeCCcEEEEeccccCCHHH
Confidence 000 000 0 000112346889998642 2589999999999999999999999999
Q ss_pred HHHHHHCCCCCCccEEEEcCccCCC--chHHhcCceEEEecCC---CCCCCCCHHHHHHHHH--Hhc---CCCchHHHHH
Q psy7366 388 TFKMLTGAIKPTSGNAYVMNHSIRD--SMDLVRSYIGYCPQFD---ALNDRLTPREHLEFYS--RVR---NVPSVLLNTI 457 (566)
Q Consensus 388 Ll~~i~G~~~~~~G~i~~~g~~~~~--~~~~~~~~i~~v~q~~---~l~~~~tv~e~l~~~~--~~~---~~~~~~~~~~ 457 (566)
|+++|.|..++.+|+|.++|+++.. +....+..|+|||.|. .++..++|.+|+.+.. .+. -+......+.
T Consensus 301 l~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~ 380 (500)
T COG1129 301 LARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERAL 380 (500)
T ss_pred HHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHH
Confidence 9999999999999999999998753 4567888999999984 6899999999998762 111 1344455667
Q ss_pred HHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccC
Q psy7366 458 VNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHN 536 (566)
Q Consensus 458 ~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd 536 (566)
++++.+.+++. ...+.++.+||||+||||.|||+|+.+|++|||||||.|+|..++.+|+++|++++++|++||++|.+
T Consensus 381 ~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSE 460 (500)
T COG1129 381 AERYIRRLRIKTPSPEQPIGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSE 460 (500)
T ss_pred HHHHHHhcCcccCCccchhhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 88999999996 56789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCEEEEEECCEEEEecCccc
Q psy7366 537 MEECEALCTKLTIMVNGQFTCLGSATH 563 (566)
Q Consensus 537 ~~~~~~~~drv~~l~~G~i~~~g~~~~ 563 (566)
++|+..+||||+||++|+++.+-+.++
T Consensus 461 lpEll~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 461 LPELLGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred hHHHHhhCCEEEEEECCEEEEEecccc
Confidence 999999999999999999998765543
No 15
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-70 Score=599.44 Aligned_cols=447 Identities=21% Similarity=0.271 Sum_probs=322.1
Q ss_pred CCcchHHHHHhccccCCCccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHh-----------cCC-------
Q psy7366 1 MGLTTTPKRVVTLLLTTQKVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRV-----------RNV------- 62 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~-----------~~~------- 62 (566)
.||||++|+++|++.+++ |.- .-.....|||++|++.+++.+||.||+.+.... .+.
T Consensus 38 sGKSTLl~~l~Gl~~p~~---G~i--~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (530)
T PRK15064 38 CGKSTFMKILGGDLEPSA---GNV--SLDPNERLGKLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEED 112 (530)
T ss_pred CCHHHHHHHHhCCCCCCC---ceE--EecCCCEEEEEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccch
Confidence 599999999999986643 111 001123599999999999999999999764210 000
Q ss_pred --------------ChhhHHHHHHHHHHHcCCCcc-cccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHH
Q psy7366 63 --------------PSVLLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARR 127 (566)
Q Consensus 63 --------------~~~~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~ 127 (566)
...+.+.++.++++.+|+... .++++.+||||||||++||+||+.+|+||||||||++||+.++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~ 192 (530)
T PRK15064 113 GMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIR 192 (530)
T ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHH
Confidence 011234678899999999764 46789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCccccCCCCCCCCccchhHHHhhc
Q psy7366 128 FLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALN 206 (566)
Q Consensus 128 ~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
+|.++|++ .|.|||+||||++++.++||||++|++|+++ +.|+++++....... .........
T Consensus 193 ~l~~~l~~---~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~~-------------~~~~~~~~~ 256 (530)
T PRK15064 193 WLEDVLNE---RNSTMIIISHDRHFLNSVCTHMADLDYGELRVYPGNYDEYMTAATQA-------------RERLLADNA 256 (530)
T ss_pred HHHHHHHh---CCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEecCCHHHHHHHHHHH-------------HHHHHHHHH
Confidence 99999863 5899999999999999999999999999994 788888764311000 000000000
Q ss_pred cCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHH
Q psy7366 207 DGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCM 286 (566)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (566)
.. ...+- ....+.... . .+
T Consensus 257 ~~-------------------------------~~~~~-------~~~~~~~~~---~--------~~------------ 275 (530)
T PRK15064 257 KK-------------------------------KAQIA-------ELQSFVSRF---S--------AN------------ 275 (530)
T ss_pred HH-------------------------------HHHHH-------HHHHHHHHh---h--------cc------------
Confidence 00 00000 000000000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhh-cCCCCCCeEEEeeeEEEeCCcCCCcceeeee
Q psy7366 287 ACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVE-HGADSGDVLVVKRLFKIYANSKGTKPAVNQI 365 (566)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~i 365 (566)
... ........+.. ................ ..... .......+++++|+++.|+ ++.+|+++
T Consensus 276 ~~~-----~~~~~~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~----~~~~l~~i 338 (530)
T PRK15064 276 ASK-----AKQATSRAKQI----DKIKLEEVKPSSRQNP----FIRFEQDKKLHRNALEVENLTKGFD----NGPLFKNL 338 (530)
T ss_pred chh-----hHHHHHHHHHH----hhccccccCCccccCc----eeeCCCCCCCCCceEEEEeeEEeeC----CceeecCc
Confidence 000 00000000000 0000000000000000 00000 0011224799999999996 45699999
Q ss_pred eEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCC--CCCCCCHHHHHHHH
Q psy7366 366 SFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDA--LNDRLTPREHLEFY 443 (566)
Q Consensus 366 sl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~--l~~~~tv~e~l~~~ 443 (566)
||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. .++||+||++. +++.+|+.+|+.+.
T Consensus 339 s~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~----------~~i~~~~q~~~~~~~~~~t~~~~~~~~ 408 (530)
T PRK15064 339 NLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN----------ANIGYYAQDHAYDFENDLTLFDWMSQW 408 (530)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc----------eEEEEEcccccccCCCCCcHHHHHHHh
Confidence 9999999999999999999999999999999999999999873 36999999964 56678999998643
Q ss_pred HHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q psy7366 444 SRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIER 522 (566)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~ 522 (566)
.. .. ..++.+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.+++.|++
T Consensus 409 ~~----~~-~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~ 483 (530)
T PRK15064 409 RQ----EG-DDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEK 483 (530)
T ss_pred cc----CC-ccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 11 11 1235578899999995 678999999999999999999999999999999999999999999999999987
Q ss_pred HHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEE-EecCcccc
Q psy7366 523 AVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHL 564 (566)
Q Consensus 523 ~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~-~~g~~~~l 564 (566)
+ +.|||++|||++++..+|||+++|++|+++ +.|+++++
T Consensus 484 ~---~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~ 523 (530)
T PRK15064 484 Y---EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEY 523 (530)
T ss_pred C---CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHH
Confidence 6 469999999999999999999999999998 77887664
No 16
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.4e-70 Score=600.64 Aligned_cols=447 Identities=21% Similarity=0.267 Sum_probs=320.7
Q ss_pred CCcchHHHHHhccccCCCccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHH-h-------------cCCC---
Q psy7366 1 MGLTTTPKRVVTLLLTTQKVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSR-V-------------RNVP--- 63 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~-~-------------~~~~--- 63 (566)
.||||++|+++|++.|+. |.- .-.....||||||+|.+++.+||.||+.+... . ....
T Consensus 44 sGKSTLlk~i~G~~~p~~---G~i--~~~~~~~i~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (556)
T PRK11819 44 AGKSTLLRIMAGVDKEFE---GEA--RPAPGIKVGYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDAD 118 (556)
T ss_pred CCHHHHHHHHhCCCCCCC---ceE--EecCCCEEEEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchh
Confidence 599999999999986643 211 01112469999999999999999999986421 0 0111
Q ss_pred -------------------hhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHH
Q psy7366 64 -------------------SVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPG 124 (566)
Q Consensus 64 -------------------~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~ 124 (566)
..+...++.++++.+|+.. .++++.+|||||||||+||+||+.+|++||||||||+||+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~ 197 (556)
T PRK11819 119 FDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP-WDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAE 197 (556)
T ss_pred hHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc-ccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChH
Confidence 0123567889999999964 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCccccCCCCCCCCccchhHHH
Q psy7366 125 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALPVSGNDLGRGDPVRSELSR 203 (566)
Q Consensus 125 ~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (566)
++.++.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++...... ....
T Consensus 198 ~~~~l~~~L~~~---~~tviiisHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~----------------~~~~ 258 (556)
T PRK11819 198 SVAWLEQFLHDY---PGTVVAVTHDRYFLDNVAGWILELDRGRGIPWEGNYSSWLEQKAK----------------RLAQ 258 (556)
T ss_pred HHHHHHHHHHhC---CCeEEEEeCCHHHHHhhcCeEEEEeCCEEEEecCCHHHHHHHHHH----------------HHHH
Confidence 999999999876 359999999999999999999999999986 77888775432100 0000
Q ss_pred hhccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHH
Q psy7366 204 ALNDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNL 283 (566)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (566)
..... + .....+. ....+.+ .
T Consensus 259 ~~~~~-----------~-----------------~~~~~~~-------~~~~~~~----------------------~-- 279 (556)
T PRK11819 259 EEKQE-----------A-----------------ARQKALK-------RELEWVR----------------------Q-- 279 (556)
T ss_pred HHHHH-----------H-----------------HHHHHHH-------HHHHHHH----------------------H--
Confidence 00000 0 0000000 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceee
Q psy7366 284 TCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVN 363 (566)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~ 363 (566)
..... ........ ..+.... ...... ....... .. .........+++++|+++.|+ ++.+|+
T Consensus 280 ---~~~~~--~~~~~~~~-~~~~~~~---~~~~~~-~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~~~----~~~~l~ 341 (556)
T PRK11819 280 ---SPKAR--QAKSKARL-ARYEELL---SEEYQK-RNETNEI---FI-PPGPRLGDKVIEAENLSKSFG----DRLLID 341 (556)
T ss_pred ---hhhhh--HHHHHHHH-HHHHHhh---cccccc-cCCCcee---ec-CCCCCCCCeEEEEEeEEEEEC----Ceeeec
Confidence 00000 00000000 0000000 000000 0000000 00 000011234799999999996 467999
Q ss_pred eeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCC-CCCCCCCHHHHHHH
Q psy7366 364 QISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFD-ALNDRLTPREHLEF 442 (566)
Q Consensus 364 ~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~-~l~~~~tv~e~l~~ 442 (566)
|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ ++ ++||+||++ .+++.+|+.||+.+
T Consensus 342 ~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~---------~i~~v~q~~~~~~~~~tv~e~l~~ 411 (556)
T PRK11819 342 DLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TV---------KLAYVDQSRDALDPNKTVWEEISG 411 (556)
T ss_pred ceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ce---------EEEEEeCchhhcCCCCCHHHHHHh
Confidence 99999999999999999999999999999999999999999944 21 599999996 68888999999987
Q ss_pred HHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q psy7366 443 YSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIE 521 (566)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~ 521 (566)
.......... ...+..+++.+++.. ..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..++++|.
T Consensus 412 ~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 489 (556)
T PRK11819 412 GLDIIKVGNR--EIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALL 489 (556)
T ss_pred hccccccccc--HHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 5432222211 223457899999964 5799999999999999999999999999999999999999999999999998
Q ss_pred HHHhCCcEEEEEccCHHHHHhhCCEEEEEEC-CEEE-EecCcccc
Q psy7366 522 RAVSEGRCVILTSHNMEECEALCTKLTIMVN-GQFT-CLGSATHL 564 (566)
Q Consensus 522 ~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~-G~i~-~~g~~~~l 564 (566)
++. .|||++|||++++..+||++++|++ |++. ..|+.+++
T Consensus 490 ~~~---~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~ 531 (556)
T PRK11819 490 EFP---GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEY 531 (556)
T ss_pred hCC---CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHH
Confidence 872 4899999999999999999999986 7876 46665543
No 17
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7.8e-69 Score=640.89 Aligned_cols=243 Identities=56% Similarity=0.950 Sum_probs=218.1
Q ss_pred CcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCc
Q psy7366 321 LEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTS 400 (566)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~ 400 (566)
.++.++..++.++.......++|+++|++|.|+. +.+.+|+|+||+|++||++||+||||||||||+|+|+|+++|++
T Consensus 1916 ~eD~DV~~Er~rV~~~~~~~~~L~v~nLsK~Y~~--~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~pts 1993 (2272)
T TIGR01257 1916 DEDDDVAEERQRIISGGNKTDILRLNELTKVYSG--TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTS 1993 (2272)
T ss_pred CchhHHHHHHHHHhccCCCCceEEEEEEEEEECC--CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCc
Confidence 3456677777776554455678999999999962 12579999999999999999999999999999999999999999
Q ss_pred cEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCCh
Q psy7366 401 GNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSG 480 (566)
Q Consensus 401 G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSg 480 (566)
|+|+++|+++.......++.|||+||++.+++.+|++||+.++...++.+....++.++++++.++|.+..++++++|||
T Consensus 1994 G~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~~~LSG 2073 (2272)
T TIGR01257 1994 GDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAGTYSG 2073 (2272)
T ss_pred cEEEECCEECcchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCChhhCCH
Confidence 99999999986544455678999999999999999999999887777766555566788999999999889999999999
Q ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 481 GNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 481 Gqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
||||||+||+||+.+|+||||||||+||||.+++.++++|++++++|+|||++||++++++.+|||+++|++|++++.|+
T Consensus 2074 GqKqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs 2153 (2272)
T TIGR01257 2074 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999999998789999999999999999999999999999999999
Q ss_pred ccccc
Q psy7366 561 ATHLK 565 (566)
Q Consensus 561 ~~~l~ 565 (566)
+++++
T Consensus 2154 ~q~Lk 2158 (2272)
T TIGR01257 2154 IQHLK 2158 (2272)
T ss_pred HHHHH
Confidence 98875
No 18
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.4e-69 Score=595.16 Aligned_cols=446 Identities=21% Similarity=0.262 Sum_probs=318.3
Q ss_pred CCcchHHHHHhccccCCCccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHh--------------cCCChh-
Q psy7366 1 MGLTTTPKRVVTLLLTTQKVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRV--------------RNVPSV- 65 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~--------------~~~~~~- 65 (566)
.||||++|+|+|++.|.. |.- .-.....||||||++.+++.+||.||+.++... ...+..
T Consensus 42 sGKSTLl~~i~G~~~p~~---G~i--~~~~~~~i~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (552)
T TIGR03719 42 AGKSTLLRIMAGVDKEFN---GEA--RPAPGIKVGYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDAD 116 (552)
T ss_pred CCHHHHHHHHhCCCCCCC---ceE--EecCCCEEEEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchh
Confidence 599999999999986643 211 011124699999999999999999999874211 011111
Q ss_pred ---------------------hHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHH
Q psy7366 66 ---------------------LLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPG 124 (566)
Q Consensus 66 ---------------------~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~ 124 (566)
...+++.++++.+|++. .++++.+|||||||||+||+||+.+|++|||||||++||+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~ 195 (552)
T TIGR03719 117 MDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAE 195 (552)
T ss_pred hHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChH
Confidence 12356778888999964 68899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCccccCCCCCCCCccchhHHH
Q psy7366 125 ARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALPVSGNDLGRGDPVRSELSR 203 (566)
Q Consensus 125 ~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (566)
+++++.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++.+.... ....
T Consensus 196 ~~~~l~~~L~~~---~~tvIiisHd~~~~~~~~d~v~~l~~g~i~~~~g~~~~~~~~~~~----------------~~~~ 256 (552)
T TIGR03719 196 SVAWLEQHLQEY---PGTVVAVTHDRYFLDNVAGWILELDRGRGIPWEGNYSSWLEQKEK----------------RLEQ 256 (552)
T ss_pred HHHHHHHHHHhC---CCeEEEEeCCHHHHHhhcCeEEEEECCEEEEecCCHHHHHHHHHH----------------HHHH
Confidence 999999999875 359999999999999999999999999976 77888876532100 0000
Q ss_pred hhccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHH
Q psy7366 204 ALNDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNL 283 (566)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (566)
..... . .....+. ....+.+ ..
T Consensus 257 ~~~~~-------------~---------------~~~~~~~-------~~~~~~~----------------------~~- 278 (552)
T TIGR03719 257 EEKEE-------------S---------------ARQKALK-------RELEWVR----------------------SS- 278 (552)
T ss_pred HHHHH-------------H---------------HHHHHHH-------HHHHHHH----------------------hh-
Confidence 00000 0 0000000 0000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceee
Q psy7366 284 TCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVN 363 (566)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~ 363 (566)
.... .+..... ...+..... .......... .... .........+++++|+++.|+ ++.+|+
T Consensus 279 ----~~~~--~~~~~~~-~~~~~~~~~----~~~~~~~~~~---~~~~-~~~~~~~~~~l~~~~l~~~~~----~~~~l~ 339 (552)
T TIGR03719 279 ----PKAR--QAKSKAR-LARYEELLS----QEFQKRNETA---EIYI-PPGPRLGDKVIEAENLSKGFG----DKLLID 339 (552)
T ss_pred ----hhhH--HHHHHHH-HHHHHhhhh----hcccccCCCc---eeec-CCCCCCCCeEEEEeeEEEEEC----Ceeeec
Confidence 0000 0000000 000000000 0000000000 0000 000011234799999999996 467999
Q ss_pred eeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCC-CCCCCCCHHHHHHH
Q psy7366 364 QISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFD-ALNDRLTPREHLEF 442 (566)
Q Consensus 364 ~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~-~l~~~~tv~e~l~~ 442 (566)
|+||+|++|++++|+||||||||||+++|+|+++|++|+|++++ ++ +|||+||++ .+++.+|+.||+.+
T Consensus 340 ~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~---------~i~~v~q~~~~~~~~~tv~e~l~~ 409 (552)
T TIGR03719 340 DLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV---------KLAYVDQSRDALDPNKTVWEEISG 409 (552)
T ss_pred cceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce---------EEEEEeCCccccCCCCcHHHHHHh
Confidence 99999999999999999999999999999999999999999944 21 599999996 47888999999987
Q ss_pred HHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q psy7366 443 YSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIE 521 (566)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~ 521 (566)
.......... ...+.++++.+++.. ..++++.+|||||||||+|||||+.+|++|||||||+|||+.+++.++++|+
T Consensus 410 ~~~~~~~~~~--~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 487 (552)
T TIGR03719 410 GLDIIQLGKR--EVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALL 487 (552)
T ss_pred hccccccCcc--hHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 5432222211 223567899999964 5799999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCcEEEEEccCHHHHHhhCCEEEEEEC-CEEE-EecCccc
Q psy7366 522 RAVSEGRCVILTSHNMEECEALCTKLTIMVN-GQFT-CLGSATH 563 (566)
Q Consensus 522 ~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~-G~i~-~~g~~~~ 563 (566)
++ +.|||+||||++++..+||++++|++ |++. ..|+.++
T Consensus 488 ~~---~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~ 528 (552)
T TIGR03719 488 EF---AGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSE 528 (552)
T ss_pred HC---CCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHH
Confidence 87 24899999999999999999999987 5776 4565543
No 19
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-68 Score=593.23 Aligned_cols=444 Identities=20% Similarity=0.279 Sum_probs=311.4
Q ss_pred CCcchHHHHHhccccCCCccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHH-----------------------H
Q psy7366 1 MGLTTTPKRVVTLLLTTQKVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFY-----------------------S 57 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~-----------------------~ 57 (566)
+||||++|+|+|++.|+. |. ........|||++|++..+ ..++.+++.-. .
T Consensus 38 sGKSTLLkiL~G~~~pd~---G~--I~~~~~~~i~~~~q~~~~~-~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~ 111 (638)
T PRK10636 38 CGKSTLLALLKNEISADG---GS--YTFPGNWQLAWVNQETPAL-PQPALEYVIDGDREYRQLEAQLHDANERNDGHAIA 111 (638)
T ss_pred CCHHHHHHHHhCCCCCCC---ce--EEecCCCEEEEEecCCCCC-CCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHH
Confidence 599999999999886654 21 1111123489999975333 24655544210 0
Q ss_pred Hh----cCCChhhHHHHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHH
Q psy7366 58 RV----RNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTC 132 (566)
Q Consensus 58 ~~----~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~ 132 (566)
.. ...+.++...++.++++.+|+. ...++++.+|||||||||+||+||+.+|+||||||||||||+.++.||.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~ 191 (638)
T PRK10636 112 TIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKW 191 (638)
T ss_pred HHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCchhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHH
Confidence 00 0011234456889999999997 578999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCEEEEecCChhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCC
Q psy7366 133 IERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGS 211 (566)
Q Consensus 133 l~~l~~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (566)
|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++......... ...........+ .
T Consensus 192 L~~~---~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~~~~~~~~-------------~~~~~~~~~~~~-~ 254 (638)
T PRK10636 192 LKSY---QGTLILISHDRDFLDPIVDKIIHIEQQSLFEYTGNYSSFEVQRATR-------------LAQQQAMYESQQ-E 254 (638)
T ss_pred HHhC---CCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEecCCHHHHHHHHHHH-------------HHHHHHHHHHHH-H
Confidence 9865 569999999999999999999999999996 578777654311000 000000000000 0
Q ss_pred ccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHH
Q psy7366 212 GIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGA 291 (566)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (566)
.++ ....|.+.+ ...+....
T Consensus 255 ~~~-------------------------------------~~~~~i~r~-----------------------~~~a~~~~ 274 (638)
T PRK10636 255 RVA-------------------------------------HLQSYIDRF-----------------------RAKATKAK 274 (638)
T ss_pred HHH-------------------------------------HHHHHHHHh-----------------------hhhhhhHH
Confidence 000 000000000 00000000
Q ss_pred HHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhc-CCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEe
Q psy7366 292 LYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEH-GADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVG 370 (566)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~ 370 (566)
.+ .+.. +.+... . ... +.. ..... ...... ......+|+++|+++.|+ ++.+|+|+||+|.
T Consensus 275 --~a--~~r~-~~l~~~-~--~~~--~~~-~~~~~---~~~~~~~~~~~~~~l~~~~l~~~y~----~~~il~~isl~i~ 336 (638)
T PRK10636 275 --QA--QSRI-KMLERM-E--LIA--PAH-VDNPF---HFSFRAPESLPNPLLKMEKVSAGYG----DRIILDSIKLNLV 336 (638)
T ss_pred --HH--HHHH-HHHHHh-h--ccc--ccc-cCCce---eEecCCCccCCCceEEEEeeEEEeC----CeeeeccceEEEC
Confidence 00 0000 000000 0 000 000 00000 000000 011235799999999996 4679999999999
Q ss_pred CCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCC--CCCCCCCHHHHHHHHHHhcC
Q psy7366 371 RGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRN 448 (566)
Q Consensus 371 ~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~ 448 (566)
+|+++||+||||||||||||+|+|+++|++|+|.+++. .++||++|+. .+.+..|+.+++... .
T Consensus 337 ~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~----------~~igy~~Q~~~~~l~~~~~~~~~~~~~---~- 402 (638)
T PRK10636 337 PGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG----------IKLGYFAQHQLEFLRADESPLQHLARL---A- 402 (638)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC----------EEEEEecCcchhhCCccchHHHHHHHh---C-
Confidence 99999999999999999999999999999999999742 2599999974 355667887775321 1
Q ss_pred CCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC
Q psy7366 449 VPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEG 527 (566)
Q Consensus 449 ~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g 527 (566)
.......+.++++.|++. ...++++.+|||||||||+||++|+.+|++|||||||+|||+.++..+.++|.++ +
T Consensus 403 --~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~ 477 (638)
T PRK10636 403 --PQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---E 477 (638)
T ss_pred --chhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---C
Confidence 112345678999999996 4689999999999999999999999999999999999999999999999999987 3
Q ss_pred cEEEEEccCHHHHHhhCCEEEEEECCEEE-EecCcccc
Q psy7366 528 RCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHL 564 (566)
Q Consensus 528 ~tvl~vsHd~~~~~~~~drv~~l~~G~i~-~~g~~~~l 564 (566)
.|||+||||++++..+||++++|++|+++ +.|+.++.
T Consensus 478 gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 515 (638)
T PRK10636 478 GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDY 515 (638)
T ss_pred CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHH
Confidence 59999999999999999999999999997 67776654
No 20
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=9.2e-68 Score=583.61 Aligned_cols=405 Identities=23% Similarity=0.297 Sum_probs=307.0
Q ss_pred CCcchHHHHHhccccCCC-ccC-------------CCCCcc-----cccccceeEEcCCCCCCCC---CCHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ-KVP-------------GSNPTI-----DKNLSYIGYCPQFDALNDR---LTPREHLEFYSR 58 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~-~~~-------------~~~~~~-----~~~~~~ig~v~Q~~~l~~~---~tv~e~l~~~~~ 58 (566)
+||||++|+++|++.|+. .+. |..... .....++++.+|...+++. .||.|++.+.
T Consensus 110 aGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~-- 187 (590)
T PRK13409 110 IGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKV-- 187 (590)
T ss_pred CCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHhccCcceeecccchhhhhhhhcchHHHHHHhh--
Confidence 699999999999998765 221 211110 0112346666776544432 3999998642
Q ss_pred hcCCChhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh
Q psy7366 59 VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS 138 (566)
Q Consensus 59 ~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~ 138 (566)
+...++.++++.+||+..+++++.+||||||||++||+||+.+|++|||||||++||+.++.++.++|+++++
T Consensus 188 -------~~~~~~~~~l~~l~l~~~~~~~~~~LSgGe~qrv~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~ 260 (590)
T PRK13409 188 -------DERGKLDEVVERLGLENILDRDISELSGGELQRVAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAE 260 (590)
T ss_pred -------hHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
Confidence 2345788999999999889999999999999999999999999999999999999999999999999999988
Q ss_pred CCCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCC
Q psy7366 139 EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSAR 218 (566)
Q Consensus 139 ~g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (566)
|+|||+||||++++..+||+|++|+++.-. .|....-.. ........+....
T Consensus 261 -g~tvIivsHd~~~l~~~~D~v~vl~~~~g~-~g~~~~~~~-----------------~~~~i~~~~~~~~--------- 312 (590)
T PRK13409 261 -GKYVLVVEHDLAVLDYLADNVHIAYGEPGA-YGVVSKPKG-----------------VRVGINEYLKGYL--------- 312 (590)
T ss_pred -CCEEEEEeCCHHHHHHhCCEEEEEeCCccc-cceecchhH-----------------HHHhHHHHHHhcc---------
Confidence 999999999999999999999999864100 010000000 0000000000000
Q ss_pred cccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHH
Q psy7366 219 PEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINL 298 (566)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (566)
.. .
T Consensus 313 -------------------------------------------~~----------------------------------e 315 (590)
T PRK13409 313 -------------------------------------------PE----------------------------------E 315 (590)
T ss_pred -------------------------------------------hh----------------------------------h
Confidence 00 0
Q ss_pred HHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEE
Q psy7366 299 SIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLL 378 (566)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~ 378 (566)
..+ ............. ........+++++|+++.|+ + ..|+++||+|++||+++|+
T Consensus 316 --~~~--------~~~~~~~~~~~~~---------~~~~~~~~~l~~~~ls~~~~----~-~~l~~~s~~i~~Geiv~l~ 371 (590)
T PRK13409 316 --NMR--------IRPEPIEFEERPP---------RDESERETLVEYPDLTKKLG----D-FSLEVEGGEIYEGEVIGIV 371 (590)
T ss_pred --hhh--------ccccCcceecCCC---------ccccCCceEEEEcceEEEEC----C-EEEEecceEECCCCEEEEE
Confidence 000 0000000000000 00001234799999999996 3 3599999999999999999
Q ss_pred cCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHH
Q psy7366 379 GLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 458 (566)
Q Consensus 379 G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 458 (566)
||||||||||+|+|+|+++|++|+|.++ + +++|+||++.+++.+||.||+.+..... .. ...+
T Consensus 372 G~NGsGKSTLlk~L~Gl~~p~~G~I~~~---~---------~i~y~~Q~~~~~~~~tv~e~l~~~~~~~--~~---~~~~ 434 (590)
T PRK13409 372 GPNGIGKTTFAKLLAGVLKPDEGEVDPE---L---------KISYKPQYIKPDYDGTVEDLLRSITDDL--GS---SYYK 434 (590)
T ss_pred CCCCCCHHHHHHHHhCCCCCCceEEEEe---e---------eEEEecccccCCCCCcHHHHHHHHhhhc--Ch---HHHH
Confidence 9999999999999999999999999885 1 5999999988888899999998653211 11 2346
Q ss_pred HHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCH
Q psy7366 459 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM 537 (566)
Q Consensus 459 ~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~ 537 (566)
.++++.+++.+..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|++++++ |+|||++|||+
T Consensus 435 ~~~L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~ 514 (590)
T PRK13409 435 SEIIKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDI 514 (590)
T ss_pred HHHHHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 78999999998899999999999999999999999999999999999999999999999999999765 89999999999
Q ss_pred HHHHhhCCEEEEEECCEEEEecCc
Q psy7366 538 EECEALCTKLTIMVNGQFTCLGSA 561 (566)
Q Consensus 538 ~~~~~~~drv~~l~~G~i~~~g~~ 561 (566)
+++..+|||+++|++ ++...|+.
T Consensus 515 ~~~~~~aDrvivl~~-~~~~~g~~ 537 (590)
T PRK13409 515 YMIDYISDRLMVFEG-EPGKHGHA 537 (590)
T ss_pred HHHHHhCCEEEEEcC-cceeeeec
Confidence 999999999999964 77766653
No 21
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.9e-67 Score=539.29 Aligned_cols=424 Identities=24% Similarity=0.333 Sum_probs=353.9
Q ss_pred CCcchHHHHHhccccCCC--------ccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhc---CCChhhHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ--------KVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR---NVPSVLLNT 69 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~--------~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~---~~~~~~~~~ 69 (566)
.||||+.|++.|++.|+. ++...+|. ++.+.+||||+|++.|++.+||.||+..+.+.. .++.....+
T Consensus 41 AGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~-dA~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~ 119 (501)
T COG3845 41 AGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPR-DAIRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARA 119 (501)
T ss_pred CCHHHHHHHHhCcccCCcceEEECCEEeccCCHH-HHHHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHH
Confidence 499999999999998877 34444444 445678999999999999999999999887642 356778889
Q ss_pred HHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCC
Q psy7366 70 IVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHN 149 (566)
Q Consensus 70 ~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~ 149 (566)
+++++.+++||+.++++++.+||-|+||||+|.+||+++|++|||||||+.|.|.+.++|+++|++++++|+|||+|||.
T Consensus 120 ~i~~l~~~yGl~vdp~~~V~dLsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHK 199 (501)
T COG3845 120 RIKELSERYGLPVDPDAKVADLSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHK 199 (501)
T ss_pred HHHHHHHHhCCCCCccceeecCCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecCh-hHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccccc
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSA-THLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNEN 228 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (566)
+.|+.++|||+.||+.|+++..-++ .+ ....++.+.+-+..
T Consensus 200 L~Ev~~iaDrvTVLR~Gkvvgt~~~~~~-------------------~t~~ela~lMvG~~------------------- 241 (501)
T COG3845 200 LKEVMAIADRVTVLRRGKVVGTVDPVAE-------------------TTEEELAELMVGRE------------------- 241 (501)
T ss_pred HHHHHHhhCeeEEEeCCeEEeeecCCCC-------------------CCHHHHHHHhcCCc-------------------
Confidence 9999999999999999998754331 11 00111211111100
Q ss_pred cCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy7366 229 IDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRC 308 (566)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (566)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T COG3845 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHH
Q psy7366 309 FTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTT 388 (566)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTL 388 (566)
+. .... + ....+....|++++|+..-. .+...+++|||+|+.|||+||.|-.|-|.+.|
T Consensus 242 --------v~--~~~~-----~---~~~~pg~~vL~V~~L~v~~~---~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL 300 (501)
T COG3845 242 --------VV--LRVV-----K---PPSTPGEVVLEVEDLSVKDR---RGVTAVKDVSFEVRAGEIVGIAGVAGNGQSEL 300 (501)
T ss_pred --------cc--cccc-----c---CCCCCCCeEEEEeeeEeecC---CCCceeeeeeeEEecCcEEEEEecCCCCHHHH
Confidence 00 0000 0 00112235799999997643 23568999999999999999999999999999
Q ss_pred HHHHHCCCCCCccEEEEcCccC-CC--chHHhcCceEEEecCC---CCCCCCCHHHHHHHHHHhc-------CCCchHHH
Q psy7366 389 FKMLTGAIKPTSGNAYVMNHSI-RD--SMDLVRSYIGYCPQFD---ALNDRLTPREHLEFYSRVR-------NVPSVLLN 455 (566)
Q Consensus 389 l~~i~G~~~~~~G~i~~~g~~~-~~--~~~~~~~~i~~v~q~~---~l~~~~tv~e~l~~~~~~~-------~~~~~~~~ 455 (566)
+.+|+|+.+|.+|+|.++|+++ .. .....+..++|||.|. .+.+++|+.||+.+..... ........
T Consensus 301 ~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~ 380 (501)
T COG3845 301 VEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIR 380 (501)
T ss_pred HHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHH
Confidence 9999999999999999999997 32 3445568899999985 5889999999997753211 13345667
Q ss_pred HHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEc
Q psy7366 456 TIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTS 534 (566)
Q Consensus 456 ~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vs 534 (566)
+.+.++++.|++. .....++.+||||++||+.+||-|..+|++||+.+||.|||..+.+.+.+.|.+.+++|++||++|
T Consensus 381 ~~a~~li~~fdVr~~~~~~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS 460 (501)
T COG3845 381 KFARELIEEFDVRAPSPDAPARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLIS 460 (501)
T ss_pred HHHHHHHHHcCccCCCCCcchhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 7889999999996 566788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 535 HNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 535 Hd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
-|++|+..+||||.||++|+++...++++.
T Consensus 461 ~dLDEil~lsDrIaVi~~Gri~~~~~~~~~ 490 (501)
T COG3845 461 EDLDEILELSDRIAVIYEGRIVGIVPPEEA 490 (501)
T ss_pred hhHHHHHHhhheeeeeeCCceecccccccC
Confidence 999999999999999999999998887753
No 22
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=7.6e-66 Score=577.10 Aligned_cols=441 Identities=22% Similarity=0.233 Sum_probs=308.5
Q ss_pred CCcchHHHHHhccccCCCccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHH-------------------------
Q psy7366 1 MGLTTTPKRVVTLLLTTQKVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEF------------------------- 55 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~------------------------- 55 (566)
.||||++|+|+|++.|+. |.- .-.....+++++|.+......+|.+++..
T Consensus 40 sGKSTLLriiaG~~~p~~---G~I--~~~~~~~~~~l~q~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (635)
T PRK11147 40 AGKSTLMKILNGEVLLDD---GRI--IYEQDLIVARLQQDPPRNVEGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSE 114 (635)
T ss_pred CCHHHHHHHHcCCCCCCC---eEE--EeCCCCEEEEeccCCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchH
Confidence 599999999999986654 111 11111237888887643334566665421
Q ss_pred -----HHHh----cCCChhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHH
Q psy7366 56 -----YSRV----RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGAR 126 (566)
Q Consensus 56 -----~~~~----~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~ 126 (566)
.... ...+......++.++++.+|+. .++++.+|||||||||+||+||+.+|+||||||||||||+.++
T Consensus 115 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~--~~~~~~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~ 192 (635)
T PRK11147 115 KNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD--PDAALSSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETI 192 (635)
T ss_pred HHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC--CCCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHH
Confidence 0000 0011123456789999999996 3889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCccccCCCCCCCCccchhHHHhh
Q psy7366 127 RFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRAL 205 (566)
Q Consensus 127 ~~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
+||.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++....... ........
T Consensus 193 ~~L~~~L~~~---~~tvlivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~~~~~~~~-------------~~~~~~~~ 256 (635)
T PRK11147 193 EWLEGFLKTF---QGSIIFISHDRSFIRNMATRIVDLDRGKLVSYPGNYDQYLLEKEEA-------------LRVEELQN 256 (635)
T ss_pred HHHHHHHHhC---CCEEEEEeCCHHHHHHhcCeEEEEECCEEEEecCCHHHHHHHHHHH-------------HHHHHHHH
Confidence 9999999876 359999999999999999999999999997 568887754321000 00000000
Q ss_pred ccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHH
Q psy7366 206 NDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTC 285 (566)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (566)
... ...+ .....|.+ . ..
T Consensus 257 ~~~-------------------------------~~~~-------~~~~~~~~----------------------~--~~ 274 (635)
T PRK11147 257 AEF-------------------------------DRKL-------AQEEVWIR----------------------Q--GI 274 (635)
T ss_pred HHH-------------------------------HHHH-------HHHHHHHH----------------------h--hh
Confidence 000 0000 00000000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcC-CCCCCeEEEeeeEEEeCCcCCCcceeee
Q psy7366 286 MACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHG-ADSGDVLVVKRLFKIYANSKGTKPAVNQ 364 (566)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~y~~~~~~~~~l~~ 364 (566)
. +.. +...... +...... ... .......... ....... .....+|+++|+++.|+ ++++|+|
T Consensus 275 ~---a~~--~~~~~r~-~~~~~~~-~~~---~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~----~~~il~~ 337 (635)
T PRK11147 275 K---ARR--TRNEGRV-RALKALR-RER---SERREVMGTA---KMQVEEASRSGKIVFEMENVNYQID----GKQLVKD 337 (635)
T ss_pred h---hhh--hhHHHHH-HHHHHhh-hhh---ccccccCCce---eEEeCCCCCCCCceEEEeeeEEEEC----CeEEEcC
Confidence 0 000 0000000 0000000 000 0000000000 0000001 11234799999999996 4679999
Q ss_pred eeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCC-CCCCCCCHHHHHHHH
Q psy7366 365 ISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFD-ALNDRLTPREHLEFY 443 (566)
Q Consensus 365 isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~-~l~~~~tv~e~l~~~ 443 (566)
+||+|.+|+++||+|||||||||||++|+|+++|++|+|.+ |.++ +|||++|++ .+++.+||.||+.+.
T Consensus 338 vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~---------~i~y~~q~~~~l~~~~tv~e~l~~~ 407 (635)
T PRK11147 338 FSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL---------EVAYFDQHRAELDPEKTVMDNLAEG 407 (635)
T ss_pred cEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc---------EEEEEeCcccccCCCCCHHHHHHhh
Confidence 99999999999999999999999999999999999999998 5432 599999986 588899999999764
Q ss_pred HHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q psy7366 444 SRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIER 522 (566)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~ 522 (566)
....... .....+.++++.+++. +..++++.+|||||||||+||++|+.+|++|||||||+|||+.++..+.++|++
T Consensus 408 ~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~ 485 (635)
T PRK11147 408 KQEVMVN--GRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDS 485 (635)
T ss_pred ccccccc--chHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHh
Confidence 3211111 1134577899999996 567999999999999999999999999999999999999999999999999987
Q ss_pred HHhCCcEEEEEccCHHHHHhhCCEEEEEE-CCEEEEe
Q psy7366 523 AVSEGRCVILTSHNMEECEALCTKLTIMV-NGQFTCL 558 (566)
Q Consensus 523 ~~~~g~tvl~vsHd~~~~~~~~drv~~l~-~G~i~~~ 558 (566)
+ +.|||+||||++++..+||++++|+ +|++...
T Consensus 486 ~---~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~ 519 (635)
T PRK11147 486 Y---QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRY 519 (635)
T ss_pred C---CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEc
Confidence 6 5699999999999999999999998 8998653
No 23
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.4e-67 Score=565.14 Aligned_cols=449 Identities=25% Similarity=0.287 Sum_probs=319.0
Q ss_pred CCcchHHHHHhccccCCCccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHH----------------------
Q psy7366 1 MGLTTTPKRVVTLLLTTQKVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSR---------------------- 58 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~---------------------- 58 (566)
.||||++|++.|...++. |. .......+|||++|++.+.+..||.+++.....
T Consensus 40 aGKSTLLkilaG~~~~~~---G~--i~~~~~~~v~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (530)
T COG0488 40 AGKSTLLKILAGELEPDS---GE--VTRPKGLRVGYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDE 114 (530)
T ss_pred CCHHHHHHHHcCCCcCCC---Ce--EeecCCceEEEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhH
Confidence 488888888888885553 21 223333579999999999999999998753210
Q ss_pred --------hcCCChhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHH
Q psy7366 59 --------VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLW 130 (566)
Q Consensus 59 --------~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~ 130 (566)
...++.+..+.+++.++..+|+... ++++.+||||||.||+||+||..+||+|||||||||||..++.||.
T Consensus 115 ~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe 193 (530)
T COG0488 115 LLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLE 193 (530)
T ss_pred HHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHH
Confidence 0012234456789999999999877 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEecCChhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCC
Q psy7366 131 TCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGS 209 (566)
Q Consensus 131 ~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (566)
++|.++ .| |||+||||++|++++|++|+.++.|++. +.|+++.+.....+... .+ .....+.+
T Consensus 194 ~~L~~~--~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~~~~~~r~~~~~------------~~-~~~~~~~~ 257 (530)
T COG0488 194 DYLKRY--PG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYSSYLEQKAERLR------------QE-AAAYEKQQ 257 (530)
T ss_pred HHHHhC--CC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCHHHHHHHHHHHHH------------HH-HHHHHHHH
Confidence 999864 46 9999999999999999999999999976 66777776432110000 00 00000000
Q ss_pred CCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHH
Q psy7366 210 GSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACH 289 (566)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (566)
..++ .. ..|.+.+... ...
T Consensus 258 -~~~~-----------------------~~--------------~~~i~r~~~~-----------------------~~~ 276 (530)
T COG0488 258 -KELA-----------------------KE--------------QEWIRRGKAA-----------------------ASK 276 (530)
T ss_pred -HHHH-----------------------HH--------------HHHHHHHHhc-----------------------cch
Confidence 0000 00 0000000000 000
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEE
Q psy7366 290 GALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGV 369 (566)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i 369 (566)
. ....+.. +...+..... ..........+............+..+++++|+++.|+. ++.+++++||.|
T Consensus 277 ~----k~a~sr~-k~l~k~~~~~---~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~---~~~l~~~~s~~i 345 (530)
T COG0488 277 A----KKAKSRI-KRLEKLEARL---AEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDG---GRLLLKDLSFRI 345 (530)
T ss_pred H----HHHHHHH-HHHHHHHhhh---hhcccccccccceeeccCCcccCCCeeEEEeccccccCC---CceeecCceEEe
Confidence 0 0000000 0000000000 000000000000000000000123458999999999963 368999999999
Q ss_pred eCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCC-CCCCCCCHHHHHHHHHHhcC
Q psy7366 370 GRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFD-ALNDRLTPREHLEFYSRVRN 448 (566)
Q Consensus 370 ~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~-~l~~~~tv~e~l~~~~~~~~ 448 (566)
.+|+.+||+||||+|||||||+|+|...|.+|+|.+... + ++||++|+. .+.++.|+.|++.-..
T Consensus 346 ~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~-v---------~igyf~Q~~~~l~~~~t~~d~l~~~~---- 411 (530)
T COG0488 346 DRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET-V---------KIGYFDQHRDELDPDKTVLEELSEGF---- 411 (530)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc-e---------EEEEEEehhhhcCccCcHHHHHHhhC----
Confidence 999999999999999999999999999999999988653 2 699999986 4557789999886432
Q ss_pred CCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC
Q psy7366 449 VPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEG 527 (566)
Q Consensus 449 ~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g 527 (566)
+. ..+..+...|.+|++. +...+++..||||||.|+.||+.++.+|++||||||||+||..+++.+.+.|.++ .
T Consensus 412 -~~-~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f---~ 486 (530)
T COG0488 412 -PD-GDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF---E 486 (530)
T ss_pred -cc-ccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC---C
Confidence 11 1146688999999996 5678999999999999999999999999999999999999999999999999887 7
Q ss_pred cEEEEEccCHHHHHhhCCEEEEEECCEEEEe-cCccc
Q psy7366 528 RCVILTSHNMEECEALCTKLTIMVNGQFTCL-GSATH 563 (566)
Q Consensus 528 ~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~-g~~~~ 563 (566)
.|||+||||.+++.++|++++.+.+ ++... |..++
T Consensus 487 Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~ 522 (530)
T COG0488 487 GTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYED 522 (530)
T ss_pred CeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHH
Confidence 8999999999999999999999998 55554 55443
No 24
>KOG0055|consensus
Probab=100.00 E-value=6.8e-66 Score=579.69 Aligned_cols=214 Identities=27% Similarity=0.440 Sum_probs=186.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
-++++|+++.|+.++ +.++|+|+||+|++|+.+||+||+||||||.+.+|-.+|.|++|.|.+||.++++ +...+|++
T Consensus 987 ~I~~~~V~F~YPsRP-~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~ 1065 (1228)
T KOG0055|consen 987 DIEFRNVSFAYPTRP-DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQ 1065 (1228)
T ss_pred EEEEeeeEeeCCCCC-CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHh
Confidence 489999999999655 5789999999999999999999999999999999999999999999999999987 67789999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHc-------CCCCcccc----CcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKF-------ALGHYSDR----EVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~~~~----~~~~LSgGqkqrv~la 489 (566)
+|.|.|+|.||.. |++|||.++. ...+..+ +.++++.- +|++-.|. +..+||||||||++||
T Consensus 1066 i~lVsQEP~LF~~-TIrENI~YG~--~~vs~~e----Ii~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIA 1138 (1228)
T KOG0055|consen 1066 IGLVSQEPVLFNG-TIRENIAYGS--EEVSEEE----IIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIA 1138 (1228)
T ss_pred cceeccCchhhcc-cHHHHHhccC--CCCCHHH----HHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHH
Confidence 9999999999976 9999999872 1233332 33333332 23333444 4559999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||+++||+||||||.||+||.++.+.+.+.|.+. .+|+|.|+|.|.+..+.. ||.|+|+++|+|++.|+.++|.
T Consensus 1139 RAilRnPkILLLDEATSALDseSErvVQeALd~a-~~gRT~IvIAHRLSTIqn-aD~I~Vi~~G~VvE~GtH~~L~ 1212 (1228)
T KOG0055|consen 1139 RAILRNPKILLLDEATSALDSESERVVQEALDRA-MEGRTTIVIAHRLSTIQN-ADVIAVLKNGKVVEQGTHDELL 1212 (1228)
T ss_pred HHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-hcCCcEEEEecchhhhhc-CCEEEEEECCEEEecccHHHHH
Confidence 9999999999999999999999999999999886 458999999999999986 9999999999999999999874
No 25
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.9e-63 Score=558.49 Aligned_cols=388 Identities=20% Similarity=0.288 Sum_probs=274.4
Q ss_pred hHHHHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Q psy7366 66 LLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVI 144 (566)
Q Consensus 66 ~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi 144 (566)
..+.++.++|..+|+. ...++++.+||||||||++||+||+.+|++|||||||++||+.++.+|.++|+++ |.|||
T Consensus 319 ~~~~r~~~~L~~lgl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~~tvi 395 (718)
T PLN03073 319 TAEARAASILAGLSFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKW---PKTFI 395 (718)
T ss_pred hHHHHHHHHHHHCCCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHc---CCEEE
Confidence 3455677888888986 4678999999999999999999999999999999999999999999999999875 78999
Q ss_pred EecCChhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCccccc
Q psy7366 145 LTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSG 223 (566)
Q Consensus 145 iisH~~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (566)
+||||++++..+||+|++|++|++. +.|+++.+....... .....+.....+.. .+
T Consensus 396 ivsHd~~~l~~~~d~i~~l~~g~i~~~~g~~~~~~~~~~~~-------------~~~~~~~~e~~~k~-~~--------- 452 (718)
T PLN03073 396 VVSHAREFLNTVVTDILHLHGQKLVTYKGDYDTFERTREEQ-------------LKNQQKAFESNERS-RS--------- 452 (718)
T ss_pred EEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHHHHHHH-------------HHHHHHHHHHHHHH-HH---------
Confidence 9999999999999999999999996 677776654311000 00000000000000 00
Q ss_pred ccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7366 224 FYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYK 303 (566)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (566)
. . ..+.. ......... ...... .+
T Consensus 453 -----------~---l--------------~~~i~-----------------------~~~~~a~~~----~~~~s~-~k 476 (718)
T PLN03073 453 -----------H---M--------------QAFID-----------------------KFRYNAKRA----SLVQSR-IK 476 (718)
T ss_pred -----------H---H--------------HHHHH-----------------------Hhhhhhhhh----HHHhhc-ch
Confidence 0 0 00000 000000000 000000 00
Q ss_pred HHhhhhcccccCCCCCCCcchhHHHHHHhhhc-CCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCC
Q psy7366 304 VFSRCFTRSNLHPVPVSLEEDDVRKERERVEH-GADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNG 382 (566)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NG 382 (566)
...+. .. ..... ....... .. ... ......+++++|+++.|+. .+.+|+|+||+|.+|++++|+||||
T Consensus 477 ~l~~~-~~--~~~~~---~~~~~~~-~~-~~~~~~~~~~~L~~~~ls~~y~~---~~~il~~vsl~i~~Ge~i~LvG~NG 545 (718)
T PLN03073 477 ALDRL-GH--VDAVV---NDPDYKF-EF-PTPDDRPGPPIISFSDASFGYPG---GPLLFKNLNFGIDLDSRIAMVGPNG 545 (718)
T ss_pred HHHHH-hh--hhccc---cCCCcee-ec-CCCccCCCCceEEEEeeEEEeCC---CCeeEeccEEEEcCCCEEEEECCCC
Confidence 00000 00 00000 0000000 00 000 0112357999999999952 3469999999999999999999999
Q ss_pred CcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHHHHH-HhcCCCchHHHHHHHHH
Q psy7366 383 AGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYS-RVRNVPSVLLNTIVNES 461 (566)
Q Consensus 383 sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~ 461 (566)
||||||||+|+|+++|++|+|.+++. .++||++|++. ..+++.++..+.. ... +. ...+.+.++
T Consensus 546 sGKSTLLk~L~Gll~p~~G~I~~~~~----------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~--~~-~~~~~i~~~ 610 (718)
T PLN03073 546 IGKSTILKLISGELQPSSGTVFRSAK----------VRMAVFSQHHV--DGLDLSSNPLLYMMRCF--PG-VPEQKLRAH 610 (718)
T ss_pred CcHHHHHHHHhCCCCCCCceEEECCc----------eeEEEEecccc--ccCCcchhHHHHHHHhc--CC-CCHHHHHHH
Confidence 99999999999999999999998752 36999999852 3455655543321 111 11 113457889
Q ss_pred HHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHH
Q psy7366 462 LNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEEC 540 (566)
Q Consensus 462 l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~ 540 (566)
++.+++. ...++++.+|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++
T Consensus 611 L~~~gl~~~~~~~~~~~LSgGqkqRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~~i 687 (718)
T PLN03073 611 LGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEHLI 687 (718)
T ss_pred HHHCCCChHHhcCCccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHHHH
Confidence 9999997 4678999999999999999999999999999999999999999999998888765 34999999999999
Q ss_pred HhhCCEEEEEECCEEE-EecCcccc
Q psy7366 541 EALCTKLTIMVNGQFT-CLGSATHL 564 (566)
Q Consensus 541 ~~~~drv~~l~~G~i~-~~g~~~~l 564 (566)
..+||++++|++|+++ +.|+.++.
T Consensus 688 ~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 688 SGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred HHhCCEEEEEECCEEEEeCCCHHHH
Confidence 9999999999999998 67876654
No 26
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.5e-60 Score=569.81 Aligned_cols=218 Identities=25% Similarity=0.367 Sum_probs=193.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC---CCccEEEEcCccCCCchHHhc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK---PTSGNAYVMNHSIRDSMDLVR 418 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~---~~~G~i~~~g~~~~~~~~~~~ 418 (566)
+++++||++.|+.+.+.+.+|+|+|++|++||++||+|||||||||||++|+|+.+ |++|+|.++|+++.. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~---~~~ 835 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS---SFQ 835 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh---hhh
Confidence 57999999999643345679999999999999999999999999999999999997 788999999998742 356
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcC---CCchHHHHHHHHHHHHcCCCCccccCcC----cCChhHHHHHHHHHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRN---VPSVLLNTIVNESLNKFALGHYSDREVR----TLSGGNKRKLSTAIA 491 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~LSgGqkqrv~la~a 491 (566)
+.+|||+|++.+++.+||+||+.+...++. .+..+..+.++++++.+++.+..++.++ .|||||||||+||++
T Consensus 836 ~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~~LSgGqrqRl~Ia~a 915 (1394)
T TIGR00956 836 RSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGEGLNVEQRKRLTIGVE 915 (1394)
T ss_pred cceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCCCCCHHHhhHHHHHHH
Confidence 789999999888899999999998765432 2333445678999999999988888887 799999999999999
Q ss_pred HcCCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHH-HHhhCCEEEEEECC-EEEEecCcc
Q psy7366 492 LLGNPP-LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEE-CEALCTKLTIMVNG-QFTCLGSAT 562 (566)
Q Consensus 492 l~~~p~-lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~-~~~~~drv~~l~~G-~i~~~g~~~ 562 (566)
|+.+|+ ||||||||+|||+.++..+++.|++++++|+|||++||+++. +.+.||++++|++| ++++.|++.
T Consensus 916 L~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 916 LVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 999997 999999999999999999999999998889999999999986 45779999999997 999999874
No 27
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.1e-61 Score=577.28 Aligned_cols=212 Identities=21% Similarity=0.326 Sum_probs=183.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.|+++|++++|.. +.+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|++
T Consensus 1234 ~I~f~nVsf~Y~~--~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~ 1311 (1495)
T PLN03232 1234 SIKFEDVHLRYRP--GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRV 1311 (1495)
T ss_pred cEEEEEEEEEECC--CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhh
Confidence 5999999999952 23579999999999999999999999999999999999999999999999999976 56678899
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la 489 (566)
|+||||+|.+|++ |++|||.++. ..+ ++.+.++++..++.+ .......+||||||||++||
T Consensus 1312 i~iVpQdp~LF~g-TIr~NL~~~~---~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLA 1383 (1495)
T PLN03232 1312 LSIIPQSPVLFSG-TVRFNIDPFS---EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLA 1383 (1495)
T ss_pred cEEECCCCeeeCc-cHHHHcCCCC---CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHH
Confidence 9999999999987 9999997532 111 233555666655532 22344568999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|+|||||||||+||+.+.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 1384 RALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~Gt~~eLl 1457 (1495)
T PLN03232 1384 RALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLNTIID-CDKILVLSSGQVLEYDSPQELL 1457 (1495)
T ss_pred HHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHHHHHh-CCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999998863 47999999999999987 9999999999999999999874
No 28
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-60 Score=573.88 Aligned_cols=212 Identities=21% Similarity=0.332 Sum_probs=184.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.|+++|++++|.. +..++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|++
T Consensus 1237 ~I~f~nVsf~Y~~--~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~ 1314 (1622)
T PLN03130 1237 SIKFEDVVLRYRP--ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKV 1314 (1622)
T ss_pred cEEEEEEEEEeCC--CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhc
Confidence 5999999999962 23479999999999999999999999999999999999999999999999999976 56778999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la 489 (566)
|+||||+|.+|++ |++|||.++. ... ++.+.++++..++.+ .......+||||||||++||
T Consensus 1315 IsiVpQdp~LF~G-TIreNLd~~~---~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLA 1386 (1622)
T PLN03130 1315 LGIIPQAPVLFSG-TVRFNLDPFN---EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLA 1386 (1622)
T ss_pred cEEECCCCccccc-cHHHHhCcCC---CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHH
Confidence 9999999999987 9999997542 111 233556666655432 22334458999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|+|||||||||+||..+.+.|.+.|++.. +++|+|+|+|+++.+.. ||||+||++|+|++.|+++++.
T Consensus 1387 RALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~tI~~-~DrIlVLd~G~IvE~Gt~~eLl 1460 (1622)
T PLN03130 1387 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILVLDAGRVVEFDTPENLL 1460 (1622)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChHHHHh-CCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999864 47999999999999987 9999999999999999999874
No 29
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.1e-60 Score=569.07 Aligned_cols=215 Identities=21% Similarity=0.342 Sum_probs=182.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----------------------
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP----------------------- 398 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~----------------------- 398 (566)
.|+++||+++|+.++ +.++|+|+||+|++|+++||+||||||||||+++|.|+++|
T Consensus 1165 ~I~f~nVsF~Y~~~~-~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~ 1243 (1466)
T PTZ00265 1165 KIEIMDVNFRYISRP-NVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQ 1243 (1466)
T ss_pred eEEEEEEEEECCCCC-CCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccc
Confidence 489999999997422 35799999999999999999999999999999999999998
Q ss_pred -------------------------------CccEEEEcCccCCC-chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHh
Q psy7366 399 -------------------------------TSGNAYVMNHSIRD-SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRV 446 (566)
Q Consensus 399 -------------------------------~~G~i~~~g~~~~~-~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~ 446 (566)
++|+|.++|.++.. ....+|++||||+|+|.+|+ .|++|||.++..
T Consensus 1244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTIreNI~~g~~- 1321 (1466)
T PTZ00265 1244 GDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSIYENIKFGKE- 1321 (1466)
T ss_pred cccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccHHHHHhcCCC-
Confidence 69999999999976 56778999999999999987 499999988521
Q ss_pred cCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHH
Q psy7366 447 RNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRF 515 (566)
Q Consensus 447 ~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~ 515 (566)
... .+.+.++++..++.+ ........||||||||++|||||+++|+|||||||||+||+.+.+.
T Consensus 1322 -~at----~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~ 1396 (1466)
T PTZ00265 1322 -DAT----REDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKL 1396 (1466)
T ss_pred -CCC----HHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHH
Confidence 112 223455555554422 2233455799999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-hCCcEEEEEccCHHHHHhhCCEEEEEEC----CEEE-EecCccccc
Q psy7366 516 LWTCIERAV-SEGRCVILTSHNMEECEALCTKLTIMVN----GQFT-CLGSATHLK 565 (566)
Q Consensus 516 l~~~l~~~~-~~g~tvl~vsHd~~~~~~~~drv~~l~~----G~i~-~~g~~~~l~ 565 (566)
|.+.|.++. .+++|+|+|||++..+.. ||+|++|++ |+++ +.|+.+++.
T Consensus 1397 I~~~L~~~~~~~~~TvIiIaHRlsti~~-aD~Ivvl~~~~~~G~iv~e~Gth~eLl 1451 (1466)
T PTZ00265 1397 IEKTIVDIKDKADKTIITIAHRIASIKR-SDKIVVFNNPDRTGSFVQAHGTHEELL 1451 (1466)
T ss_pred HHHHHHHHhccCCCEEEEEechHHHHHh-CCEEEEEeCCCCCCCEEEEecCHHHHH
Confidence 999999886 358999999999988865 999999999 8955 899998874
No 30
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-60 Score=443.46 Aligned_cols=219 Identities=26% Similarity=0.401 Sum_probs=207.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC--chHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD--SMDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~--~~~~~~~ 419 (566)
+|+++|++|+|+ ...+|++||++|.+||+++|+||||||||||||||.|+.+|++|+|+++|+++.. ....+|+
T Consensus 2 mi~i~~l~K~fg----~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~ 77 (240)
T COG1126 2 MIEIKNLSKSFG----DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRR 77 (240)
T ss_pred eEEEEeeeEEeC----CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHH
Confidence 689999999997 6789999999999999999999999999999999999999999999999987743 4566889
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHH-HhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYS-RVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
++|+|||+++|||.+||.||+.+.. ...+.++.++++.+.++|+++||.+..+.+|.+|||||||||+|||||+.+|++
T Consensus 78 ~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P~v 157 (240)
T COG1126 78 KVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKV 157 (240)
T ss_pred hcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999998854 456788888999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|+|||||+|||+...++.+.+++++++|.|+|+|||++.++.++||||++|++|+++++|+++++
T Consensus 158 mLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~ 223 (240)
T COG1126 158 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEF 223 (240)
T ss_pred EeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998875
No 31
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2e-58 Score=549.67 Aligned_cols=219 Identities=26% Similarity=0.394 Sum_probs=189.3
Q ss_pred eEEEeeeEEEeCCc---------CCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--CccEEEEcCccC
Q psy7366 342 VLVVKRLFKIYANS---------KGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP--TSGNAYVMNHSI 410 (566)
Q Consensus 342 ~l~~~~l~~~y~~~---------~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 410 (566)
.+..+||++.+... .+.+.+|+|+|++|++|++++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 58899999887421 1245799999999999999999999999999999999999763 689999999876
Q ss_pred CCchHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhc---CCCchHHHHHHHHHHHHcCCCCccccCc-----CcCChhH
Q psy7366 411 RDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVR---NVPSVLLNTIVNESLNKFALGHYSDREV-----RTLSGGN 482 (566)
Q Consensus 411 ~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq 482 (566)
.. ...++.+|||+|++.+++.+||+||+.+....+ ..+..+..+.++++++.++|.+..++.+ ..|||||
T Consensus 947 ~~--~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGe 1024 (1470)
T PLN03140 947 KQ--ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQ 1024 (1470)
T ss_pred Ch--HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHH
Confidence 42 234567999999998999999999999876443 1223334456889999999988888876 5899999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHH-HHHhhCCEEEEEEC-CEEEEecC
Q psy7366 483 KRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME-ECEALCTKLTIMVN-GQFTCLGS 560 (566)
Q Consensus 483 kqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~-~~~~~~drv~~l~~-G~i~~~g~ 560 (566)
||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++..+||++++|++ |++++.|+
T Consensus 1025 rkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~ 1104 (1470)
T PLN03140 1025 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGP 1104 (1470)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECC
Confidence 99999999999999999999999999999999999999999888999999999998 57789999999996 89999998
Q ss_pred cc
Q psy7366 561 AT 562 (566)
Q Consensus 561 ~~ 562 (566)
+.
T Consensus 1105 ~~ 1106 (1470)
T PLN03140 1105 LG 1106 (1470)
T ss_pred cc
Confidence 63
No 32
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.6e-58 Score=552.21 Aligned_cols=212 Identities=24% Similarity=0.336 Sum_probs=183.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.|+++|++++|.. +..++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|++
T Consensus 1308 ~I~f~nVsf~Y~~--~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~ 1385 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE--GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQ 1385 (1560)
T ss_pred eEEEEEEEEEeCC--CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhc
Confidence 5999999999963 23469999999999999999999999999999999999999999999999999976 56678999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-------ccc----CcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-------SDR----EVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~----~~~~LSgGqkqrv~la 489 (566)
|+||||+|.+|++ |+++||..+. ... .+.+.++++..++.+. ++. ...+||||||||++||
T Consensus 1386 I~iVpQdp~LF~g-TIreNIdp~~---~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLA 1457 (1560)
T PTZ00243 1386 FSMIPQDPVLFDG-TVRQNVDPFL---EAS----SAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMA 1457 (1560)
T ss_pred ceEECCCCccccc-cHHHHhCccc---CCC----HHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHH
Confidence 9999999999987 9999996431 111 2446677777776432 233 3357999999999999
Q ss_pred HHHcCC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGN-PPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~-p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++ |+|||||||||+||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 1458 RALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~VvE~Gt~~eLl 1532 (1560)
T PTZ00243 1458 RALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLHTVAQ-YDKIIVMDHGAVAEMGSPRELV 1532 (1560)
T ss_pred HHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHHHHHh-CCEEEEEECCEEEEECCHHHHH
Confidence 999995 89999999999999999999999998763 47999999999998875 9999999999999999999874
No 33
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.3e-58 Score=558.78 Aligned_cols=212 Identities=21% Similarity=0.270 Sum_probs=183.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. +..++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|++
T Consensus 1284 ~I~f~nVsf~Y~~--~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~ 1361 (1522)
T TIGR00957 1284 RVEFRNYCLRYRE--DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFK 1361 (1522)
T ss_pred cEEEEEEEEEeCC--CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhc
Confidence 5999999999963 23469999999999999999999999999999999999999999999999999976 56678999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-------cccc----CcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-------YSDR----EVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~----~~~~LSgGqkqrv~la 489 (566)
|+||||+|.+|++ |+++||..+. ... ++.+.++++..++.+ .++. ....||||||||++||
T Consensus 1362 i~iVpQdp~LF~g-TIr~NLdp~~---~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LA 1433 (1522)
T TIGR00957 1362 ITIIPQDPVLFSG-SLRMNLDPFS---QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLA 1433 (1522)
T ss_pred CeEECCCCcccCc-cHHHHcCccc---CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHH
Confidence 9999999999987 9999996421 112 233556666665532 2233 3457999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|+||||||||++||+++...+.+.|++.. +++|||+|+|+++.+.. ||||+||++|+|++.|+++++.
T Consensus 1434 RALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~ti~~-~DrIlVld~G~IvE~G~~~eLl 1507 (1522)
T TIGR00957 1434 RALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLNTIMD-YTRVIVLDKGEVAEFGAPSNLL 1507 (1522)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHHh-CCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999998764 47999999999999886 8999999999999999999874
No 34
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.3e-56 Score=534.08 Aligned_cols=211 Identities=23% Similarity=0.359 Sum_probs=183.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.|+++|++++|.. +.+++|+|+||+|++||.+||+|++|||||||+++|+|+++ .+|+|.+||.++.. ....+|++
T Consensus 1217 ~I~f~nVs~~Y~~--~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~ 1293 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE--AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKA 1293 (1490)
T ss_pred eEEEEEEEEEeCC--CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhc
Confidence 5999999999963 24679999999999999999999999999999999999997 79999999999976 45678999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-------cccCc----CcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-------SDREV----RTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgGqkqrv~la 489 (566)
|+||||+|.+|++ |+++||.... .. .++.+.++++..++.+. ++..+ ..||||||||++||
T Consensus 1294 is~IpQdp~LF~G-TIR~NLdp~~---~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LA 1365 (1490)
T TIGR01271 1294 FGVIPQKVFIFSG-TFRKNLDPYE---QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLA 1365 (1490)
T ss_pred eEEEeCCCccCcc-CHHHHhCccc---CC----CHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHH
Confidence 9999999999987 9999996431 11 13456677887776432 23333 37999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|+||||||||++||+.+...|.+.|++.. +++|||+|||.++.+.. ||+|++|++|+|++.|+++++.
T Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~ti~~-~DrIlvL~~G~ivE~g~p~~Ll 1439 (1490)
T TIGR01271 1366 RSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVEALLE-CQQFLVIEGSSVKQYDSIQKLL 1439 (1490)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHHh-CCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999998764 47999999999999876 9999999999999999998874
No 35
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.3e-57 Score=427.55 Aligned_cols=220 Identities=29% Similarity=0.482 Sum_probs=209.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+++++|++|.|+ ++.+++|+||+|++||+++++|||||||||+||+|.++++|++|+|+++|+++.. ....+|++
T Consensus 1 MI~~~nvsk~y~----~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~ 76 (309)
T COG1125 1 MIEFENVSKRYG----NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRK 76 (309)
T ss_pred CceeeeeehhcC----CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHh
Confidence 478999999997 6789999999999999999999999999999999999999999999999999976 45678999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC--ccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH--YSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
||||-|...|||++||.||+.+...+.++++...+++++++|+.+||++ +.+|+|++|||||||||.+||||+.+|++
T Consensus 77 IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~i 156 (309)
T COG1125 77 IGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPI 156 (309)
T ss_pred hhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCe
Confidence 9999999999999999999999888888888889999999999999974 89999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||+||||++|||.+|..+.+.+.++.++ |+|||+||||++|+.+++|||.+|++|+++..++|+++.
T Consensus 157 lLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il 224 (309)
T COG1125 157 LLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEIL 224 (309)
T ss_pred EeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHH
Confidence 9999999999999999999999999877 999999999999999999999999999999999998764
No 36
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-56 Score=436.69 Aligned_cols=223 Identities=27% Similarity=0.489 Sum_probs=209.4
Q ss_pred eEEEeeeEEEeCCc-CCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC----chHH
Q psy7366 342 VLVVKRLFKIYANS-KGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD----SMDL 416 (566)
Q Consensus 342 ~l~~~~l~~~y~~~-~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~----~~~~ 416 (566)
+|++++++|.|... .+...+|+||||+|++|||+||+|+||||||||+|||.++.+|++|+|.++|+++.. ..+.
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 47899999999752 223569999999999999999999999999999999999999999999999988854 3456
Q ss_pred hcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 417 VRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 417 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
.|++||++||+++|+...||++|++|+..+.+.++.+.++++.++++.+||.+..+++|.+|||||||||+|||||+.+|
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P 160 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNP 160 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||+|||||+|||.+.+.|+++|+++.++ |.||++|||.|+.+.++||||.+|++|++++.|+..++
T Consensus 161 ~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 161 KILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred CEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 999999999999999999999999999876 99999999999999999999999999999999998765
No 37
>KOG0054|consensus
Probab=100.00 E-value=1.8e-54 Score=498.24 Aligned_cols=217 Identities=23% Similarity=0.309 Sum_probs=187.0
Q ss_pred CCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chH
Q psy7366 337 ADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMD 415 (566)
Q Consensus 337 ~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~ 415 (566)
+|.+..|+++|++.+|.. +...||+||||+|++||.+||+|..|||||||+.+|.++..|.+|+|.+||.++.. ...
T Consensus 1133 WP~~G~I~f~~~~~RYrp--~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~ 1210 (1381)
T KOG0054|consen 1133 WPSKGEIEFEDLSLRYRP--NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLH 1210 (1381)
T ss_pred CCCCCeEEEEEeEEEeCC--CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHH
Confidence 344457999999999963 45689999999999999999999999999999999999999999999999999977 567
Q ss_pred HhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-------cccc----CcCcCChhHHH
Q psy7366 416 LVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-------YSDR----EVRTLSGGNKR 484 (566)
Q Consensus 416 ~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~----~~~~LSgGqkq 484 (566)
.+|++++.+||||.+|.+ |++.|+.-+..+ .++.+-++|+..+|.+ .+|. -..++|-||||
T Consensus 1211 dLRsrlsIIPQdPvLFsG-TvR~NLDPf~e~-------sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQ 1282 (1381)
T KOG0054|consen 1211 DLRSRLSIIPQDPVLFSG-TVRFNLDPFDEY-------SDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQ 1282 (1381)
T ss_pred HHHhcCeeeCCCCceecC-ccccccCccccc-------CHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHH
Confidence 889999999999999998 999998643221 1233455666655522 2333 34579999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 485 KLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 485 rv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.++|||||+++++||+|||.|+++|+++-..|.+.|++.-+ ++|||.|.|.++.+.+ ||||+||++|++++.|+|.+|
T Consensus 1283 LlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~TVmd-~DrVlVld~G~v~EfdsP~~L 1360 (1381)
T KOG0054|consen 1283 LLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLNTVMD-SDRVLVLDAGRVVEFDSPAEL 1360 (1381)
T ss_pred HHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccchhhh-cCeEEEeeCCeEeecCChHHH
Confidence 99999999999999999999999999999999999987433 7999999999999998 899999999999999999987
Q ss_pred c
Q psy7366 565 K 565 (566)
Q Consensus 565 ~ 565 (566)
.
T Consensus 1361 l 1361 (1381)
T KOG0054|consen 1361 L 1361 (1381)
T ss_pred H
Confidence 5
No 38
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-54 Score=410.28 Aligned_cols=222 Identities=26% Similarity=0.446 Sum_probs=207.3
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hH
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MD 415 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~ 415 (566)
...+++++++++|+ ++.+++|+||+|++||+++|+||||||||||||+|.|+++|++|+|+++|+++... ..
T Consensus 6 ~~~I~vr~v~~~fG----~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~ 81 (263)
T COG1127 6 EPLIEVRGVTKSFG----DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELY 81 (263)
T ss_pred cceEEEeeeeeecC----CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHH
Confidence 35799999999997 78899999999999999999999999999999999999999999999999998642 23
Q ss_pred HhcCceEEEecCCCCCCCCCHHHHHHHHHHh-cCCCchHHHHHHHHHHHHcCCCCc-cccCcCcCChhHHHHHHHHHHHc
Q psy7366 416 LVRSYIGYCPQFDALNDRLTPREHLEFYSRV-RNVPSVLLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 416 ~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgGqkqrv~la~al~ 493 (566)
.+++++|++||+-.||..+||+||+.|+.+- ...++...++.+..-|+.+||... .++.|++|||||++|++||||++
T Consensus 82 ~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAia 161 (263)
T COG1127 82 EIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIA 161 (263)
T ss_pred HHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHh
Confidence 5788999999999999999999999998754 467788888889999999999876 89999999999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
.+|+||++||||+||||.+...+-++|+++++. |.|+++||||++.+..+|||++++.+|+|+..|+++++.
T Consensus 162 ldPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 162 LDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred cCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 999999999999999999999999999999887 999999999999999999999999999999999999874
No 39
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.2e-54 Score=422.11 Aligned_cols=220 Identities=30% Similarity=0.447 Sum_probs=202.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+++++|+++.|+ ++++++|+||+|++||+++|+||||||||||||+|+|+++|.+|+|+++|+++.. ..+.+.++
T Consensus 2 ~L~~~~ls~~y~----~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ 77 (258)
T COG1120 2 MLEVENLSFGYG----GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKK 77 (258)
T ss_pred eeEEEEEEEEEC----CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhh
Confidence 589999999997 6889999999999999999999999999999999999999999999999999976 56677889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHh----cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRV----RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~----~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
++||||.+....++||+|.+.++..- ...+.+++++.+.++|+.+++.++.++++.+|||||||||.|||||+++|
T Consensus 78 ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~ 157 (258)
T COG1120 78 LAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVDELSGGERQRVLIARALAQET 157 (258)
T ss_pred EEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCC
Confidence 99999998888889999999876322 22334555668999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++|||||||++||+..+.++++++++++++ |.|||+++||++.+.++||++++|++|+++..|+|+++.
T Consensus 158 ~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 158 PILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred CEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 999999999999999999999999999855 999999999999999999999999999999999998763
No 40
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-55 Score=399.83 Aligned_cols=221 Identities=36% Similarity=0.546 Sum_probs=210.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
++++.+++|+|+. ...+++||||+++.|+++||+|||||||||+||+|++++.|++|.|+++|.+..+.+...|++|
T Consensus 1 Ml~v~~l~K~y~~---~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~I 77 (245)
T COG4555 1 MLEVTDLTKSYGS---KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKI 77 (245)
T ss_pred CeeeeehhhhccC---HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhc
Confidence 5789999999973 3448999999999999999999999999999999999999999999999999988777889999
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
|.++.+..+|..||++|||.|+..++++...+.+++..++.++|+|.+.+++++..||.||||||+|||||+++|++++|
T Consensus 78 GVl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vl 157 (245)
T COG4555 78 GVLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSILVL 157 (245)
T ss_pred ceecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEE
Confidence 99998888999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||||||..++..+.+.+.+++++|++||++||++++++.+||||+++++|++++.|+++++.
T Consensus 158 DEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~ 221 (245)
T COG4555 158 DEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALD 221 (245)
T ss_pred cCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988763
No 41
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-54 Score=410.10 Aligned_cols=207 Identities=28% Similarity=0.436 Sum_probs=192.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.+.++++++.|+ ...+|+|+||+|.+||+++|+||||||||||||+|+|+.+|++|+|.++|+++... ...+
T Consensus 3 ~l~i~~v~~~f~----~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFG----GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP----GPDI 74 (248)
T ss_pred eEEEEeeEEEeC----ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC----CCCE
Confidence 588999999997 47899999999999999999999999999999999999999999999999987432 3469
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+||||++.++|.+||.||+.++....+.++.+..+++.++++.+||..+.+++|.+|||||||||+|||||+.+|++|||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLl 154 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQLSGGMRQRVAIARALATRPKLLLL 154 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccccChHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999998877666766777899999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEEC--CEEE
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVN--GQFT 556 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~--G~i~ 556 (566)
||||++||..++..+.+.+.++.++ ++|||+||||++|+-.++|||++|.+ |+|.
T Consensus 155 DEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 155 DEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 9999999999999999999997654 99999999999999999999999998 5553
No 42
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-53 Score=433.53 Aligned_cols=220 Identities=29% Similarity=0.468 Sum_probs=205.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
..++++|++|.|+ +..+++|+||+|++||+++|+||||||||||||+|+|+..|++|+|.++|++++..+. .++.
T Consensus 4 ~~l~i~~v~k~yg----~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp-~kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG----DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPP-EKRP 78 (352)
T ss_pred ceEEEEeeeeecC----CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-hhcc
Confidence 4689999999997 6789999999999999999999999999999999999999999999999999987433 3567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcC-CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRN-VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
||+|||+..|||.|||+||+.|+.+... .++.+..+++.++++.++|.++.+++|++|||||||||+|||||+.+|++|
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vL 158 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVL 158 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchh
Confidence 9999999999999999999999988544 334557789999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||||.|+||...|..+...++++.++ |.|.|+||||.+++..++|||++|++|+|...|+|+++.
T Consensus 159 LLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY 225 (352)
T COG3842 159 LLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIY 225 (352)
T ss_pred hhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHh
Confidence 999999999999999999999999876 999999999999999999999999999999999999873
No 43
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.5e-53 Score=427.46 Aligned_cols=219 Identities=27% Similarity=0.434 Sum_probs=207.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.|+++|++|.|+. ..+++++||+|++||+++|+||||||||||||+|+|+.+|++|+|.++|++++..... ++.|
T Consensus 3 ~i~l~~v~K~yg~----~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~-~R~i 77 (338)
T COG3839 3 ELELKNVRKSFGS----FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPE-KRGI 77 (338)
T ss_pred EEEEeeeEEEcCC----ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh-HCCE
Confidence 5899999999972 2299999999999999999999999999999999999999999999999999873333 4679
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
++|||+..+||.|||+||+.|+.+..+.++.+.++++.+..+.+++.++++++|.+|||||||||+|||||+.+|+++||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~ 157 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLL 157 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEe
Confidence 99999999999999999999999998888889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+|+||...+..+...|+++.++ |.|+|+||||..|+..++||+++|++|+|...|+|.++.
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely 222 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELY 222 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHh
Confidence 9999999999999999999998876 999999999999999999999999999999999998874
No 44
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.2e-52 Score=400.36 Aligned_cols=214 Identities=25% Similarity=0.392 Sum_probs=191.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-----hHH
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-----MDL 416 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-----~~~ 416 (566)
+++++|++|.|..+.....+|+++||+|++||+++|+|||||||||||++|.|+.+|++|.|+++|.++... ...
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHH
Confidence 367999999997543345799999999999999999999999999999999999999999999999988642 123
Q ss_pred hcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccc-cCcCcCChhHHHHHHHHHHHcCC
Q psy7366 417 VRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSD-REVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 417 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LSgGqkqrv~la~al~~~ 495 (566)
.+++||||||+++|.+++||.||+.++..+.+.+.....+++.++++.+|+.+..+ ++|.+|||||||||+|||||+.+
T Consensus 81 R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~ 160 (226)
T COG1136 81 RRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINN 160 (226)
T ss_pred HHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcC
Confidence 45789999999999999999999999887776665455677889999999986666 88999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEE
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFT 556 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~ 556 (566)
|++||+||||.+||..+.+.+++++.++.++ |+||||||||.+.+. +|||++.|.+|++.
T Consensus 161 P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~~ 221 (226)
T COG1136 161 PKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKIE 221 (226)
T ss_pred CCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCeee
Confidence 9999999999999999999999999999876 999999999987665 79999999999954
No 45
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-52 Score=424.96 Aligned_cols=221 Identities=43% Similarity=0.711 Sum_probs=205.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.++++|++|.|+. ++.+|+||||+|++|+++||+||||||||||+|+|+|+++|++|+|.++|.++.......++++
T Consensus 4 ~i~~~~l~k~~~~---~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG---DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC---CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhhe
Confidence 5789999999962 3789999999999999999999999999999999999999999999999998876566678889
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
||+||++.+++.+|++||+.|+..+++.+.....++++++++.++|.+..++++.+||+|||||+.||+||+.+|++|||
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliL 160 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELLIL 160 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcchhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999999988766545567899999999999866889999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCC-cEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEG-RCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g-~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||+||||.++..++++|++++++| +|||++||.++++..+||||++|++|++++.|+++++.
T Consensus 161 DEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~ 225 (293)
T COG1131 161 DEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELK 225 (293)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHH
Confidence 99999999999999999999999886 89999999999999999999999999999999887653
No 46
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-53 Score=396.72 Aligned_cols=221 Identities=25% Similarity=0.398 Sum_probs=203.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC----chHHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD----SMDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~----~~~~~ 417 (566)
+|+++|+++.|+ +++.+|++|||+|++||+++|+||||||||||||+|.|+..|++|+|.++|.++.. ..+.+
T Consensus 3 ~i~~~nl~k~yp---~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~ 79 (258)
T COG3638 3 MIEVKNLSKTYP---GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKL 79 (258)
T ss_pred eEEEeeeeeecC---CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHH
Confidence 689999999996 37889999999999999999999999999999999999999999999999988754 24567
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHH--------HhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHH
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYS--------RVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~--------~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la 489 (566)
|++|||+||.+++.+.+||.+|+..+. .+.++..++.+..+.++|+++|+.+.+.++.++|||||||||+||
T Consensus 80 r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRVaIA 159 (258)
T COG3638 80 RRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRASTLSGGQQQRVAIA 159 (258)
T ss_pred HHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHHHHH
Confidence 889999999999999999999997642 334566667788899999999999999999999999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|+++|.|||+++|||.+.+.+++.|+++.++ |.|||+..|+++.+.++|||++-|++|+|+++|+++++.
T Consensus 160 RaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 160 RALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 9999999999999999999999999999999999765 999999999999999999999999999999999998763
No 47
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-52 Score=406.00 Aligned_cols=218 Identities=27% Similarity=0.455 Sum_probs=192.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+++++|+++.|+ +.++|+||||+|++|++++|+||||||||||+|+|+|+++|++|+|.+.|++..... .+.+
T Consensus 3 ~~i~v~nl~v~y~----~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~--~~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYG----NRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRR--KRLR 76 (254)
T ss_pred cEEEEeeeEEEEC----CEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccc--cCCe
Confidence 3689999999997 236999999999999999999999999999999999999999999999998865421 1467
Q ss_pred eEEEecCCC--CCCCCCHHHHHHHHHH----hcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 421 IGYCPQFDA--LNDRLTPREHLEFYSR----VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 421 i~~v~q~~~--l~~~~tv~e~l~~~~~----~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
||||||... .-...||+|.+.++.. +.+...+.+++.++++|+++|+.++.++++++|||||+|||.|||||+.
T Consensus 77 IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARAL~~ 156 (254)
T COG1121 77 IGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIGELSGGQKQRVLLARALAQ 156 (254)
T ss_pred EEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCcccccCcHHHHHHHHHHHhcc
Confidence 999999643 2334799999987522 1223344557889999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
+|++|+|||||+|+|+.++..++++|++++++|+|||+||||++.+..+||+|+.|+ +++.+.|+++++.
T Consensus 157 ~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 157 NPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 999999999999999999999999999999889999999999999999999999996 5788999988763
No 48
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6e-52 Score=424.91 Aligned_cols=221 Identities=37% Similarity=0.634 Sum_probs=204.2
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+++++|++|.|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++.......+++
T Consensus 6 ~~i~i~~l~k~~~----~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYG----DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQR 81 (306)
T ss_pred ceEEEEeEEEEEC----CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhc
Confidence 4799999999996 467999999999999999999999999999999999999999999999999986544456788
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
+||+||++.+++.+|+.||+.++...++.+......++.++++.+++.+..++++.+||||||||++||+||+.+|++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~lll 161 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLV 161 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEEE
Confidence 99999999999999999999987766665555556678899999999988999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||||+|||+.++..++++|++++++|+|||++||+++++..+|||+++|++|++++.|+++++.
T Consensus 162 LDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 226 (306)
T PRK13537 162 LDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALI 226 (306)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999877999999999999999999999999999999999988763
No 49
>KOG0927|consensus
Probab=100.00 E-value=1.5e-52 Score=432.74 Aligned_cols=388 Identities=23% Similarity=0.295 Sum_probs=273.5
Q ss_pred hhHHHHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCC-E
Q psy7366 65 VLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGR-C 142 (566)
Q Consensus 65 ~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~-t 142 (566)
..++.++.++|..+|.. +..++.+.+|||||+.|++|||+|..+|++|+|||||||||++++.||.+.|.+. .+ +
T Consensus 195 ~~~~~k~~~il~glgf~~~m~~k~~~~~SgGwrmR~aLAr~Lf~kP~LLLLDEPtnhLDleA~~wLee~L~k~---d~~~ 271 (614)
T KOG0927|consen 195 DTFEAKAAKILHGLGFLSEMQDKKVKDLSGGWRMRAALARALFQKPDLLLLDEPTNHLDLEAIVWLEEYLAKY---DRII 271 (614)
T ss_pred hhHHHHHHHHHHhcCCCHhHHHHHhhccCchHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHhc---cCce
Confidence 34566788888888875 5789999999999999999999999999999999999999999999999999865 34 8
Q ss_pred EEEecCChhHHHhhcCEEEEEeCCE-EEEecChhHHHhhccCccccCCCCCCCCccchhHHH-hhccCCCCccccCCCcc
Q psy7366 143 VILTSHNMEECEALCTKLTIMVNGQ-FTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSR-ALNDGSGSGIRNSARPE 220 (566)
Q Consensus 143 viiisH~~~~~~~~~d~i~vl~~G~-i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 220 (566)
+|+++|.-+++..+|++|+-|++++ +.+.|+++.......+ +.+ .+.....
T Consensus 272 lVi~sh~QDfln~vCT~Ii~l~~kkl~~y~Gnydqy~~tr~E-----------------~~~~q~K~~~k---------- 324 (614)
T KOG0927|consen 272 LVIVSHSQDFLNGVCTNIIHLDNKKLIYYEGNYDQYVKTRSE-----------------LEENQMKAYEK---------- 324 (614)
T ss_pred EEEEecchhhhhhHhhhhheecccceeeecCCHHHHhhHHHH-----------------HhHHHHHHHHH----------
Confidence 9999999999999999999999999 5577888775432111 100 0000000
Q ss_pred cccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHH
Q psy7366 221 VSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSI 300 (566)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (566)
.+.++-+...+.. .+..+ +. ..+. . ..+.
T Consensus 325 ------------------qqk~i~~~K~~ia---~~g~g---------------~a-~~~r-------k-------a~s~ 353 (614)
T KOG0927|consen 325 ------------------QQKQIAHMKDLIA---RFGHG---------------SA-KLGR-------K-------AQSK 353 (614)
T ss_pred ------------------HHhHHHHhhHHHH---hhccc---------------ch-hhhH-------H-------Hhhh
Confidence 0000000000000 00000 00 0000 0 0000
Q ss_pred HHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcC
Q psy7366 301 EYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGL 380 (566)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~ 380 (566)
+ +...+... ...........+..-+. ...+.-+.+.+.++|+++.|.. +..++++++|-|..++.++++||
T Consensus 354 ~-K~~~km~~----~gL~ek~~~~k~l~~~f-~~vg~~p~pvi~~~nv~F~y~~---~~~iy~~l~fgid~~srvAlVGP 424 (614)
T KOG0927|consen 354 E-KTLDKMEA----DGLTEKVVGEKVLSFRF-PEVGKIPPPVIMVQNVSFGYSD---NPMIYKKLNFGIDLDSRVALVGP 424 (614)
T ss_pred h-hhHHHHhh----ccccccccCCceEEEEc-ccccCCCCCeEEEeccccCCCC---cchhhhhhhcccCcccceeEecC
Confidence 0 00000000 00000000000000000 0111223467999999999974 34789999999999999999999
Q ss_pred CCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCchHHHHHH
Q psy7366 381 NGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIV 458 (566)
Q Consensus 381 NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 458 (566)
||+|||||||+++|.+.|..|.|.-.-.. ++++.-|+. .+.-+.++.|++.-. .+.....+.+
T Consensus 425 NG~GKsTLlKl~~gdl~p~~G~vs~~~H~----------~~~~y~Qh~~e~ldl~~s~le~~~~~-----~~~~~~~e~~ 489 (614)
T KOG0927|consen 425 NGAGKSTLLKLITGDLQPTIGMVSRHSHN----------KLPRYNQHLAEQLDLDKSSLEFMMPK-----FPDEKELEEM 489 (614)
T ss_pred CCCchhhhHHHHhhccccccccccccccc----------cchhhhhhhHhhcCcchhHHHHHHHh-----ccccchHHHH
Confidence 99999999999999999999998654332 466667763 345556777765422 1222345668
Q ss_pred HHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCH
Q psy7366 459 NESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNM 537 (566)
Q Consensus 459 ~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~ 537 (566)
+.++.+|||. +....++++||+|||.||.+|+.++..|.+|||||||+|||..+...+.+.|+++ ..+||++|||+
T Consensus 490 r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDf 566 (614)
T KOG0927|consen 490 RSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDF 566 (614)
T ss_pred HHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechh
Confidence 8999999997 6678899999999999999999999999999999999999999999999999887 67899999999
Q ss_pred HHHHhhCCEEEEEECCEEEE-ecC
Q psy7366 538 EECEALCTKLTIMVNGQFTC-LGS 560 (566)
Q Consensus 538 ~~~~~~~drv~~l~~G~i~~-~g~ 560 (566)
..+.++++++++..+|.+.. .|+
T Consensus 567 rlI~qVaeEi~~c~~~~~~~~~G~ 590 (614)
T KOG0927|consen 567 RLISQVAEEIWVCENGTVTKWDGD 590 (614)
T ss_pred hHHHHHHHHhHhhccCceeecCcc
Confidence 99999999999999887643 344
No 50
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.5e-52 Score=381.19 Aligned_cols=217 Identities=26% Similarity=0.396 Sum_probs=205.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC----chHHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD----SMDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~----~~~~~ 417 (566)
+|+++|++|.|+. ++.+|+|+||+|++||++-|+||||||||||||+|++..+|++|+|+++|.++.. ....+
T Consensus 1 mI~f~~V~k~Y~~---g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~L 77 (223)
T COG2884 1 MIRFENVSKAYPG---GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFL 77 (223)
T ss_pred CeeehhhhhhcCC---CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchh
Confidence 4789999999984 5779999999999999999999999999999999999999999999999999864 34568
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
|++||+||||..+.+..||+||++|+....+.+..+.++++.++|+.+||.+..+..|.+|||||||||+||||++.+|+
T Consensus 78 RR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~ 157 (223)
T COG2884 78 RRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPA 157 (223)
T ss_pred hheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCC
Confidence 89999999999999999999999999999899998999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSA 561 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~ 561 (566)
+||.||||.+|||.....+++++.++.+.|.||||+|||.+.+..+--|++.+++|+++.+...
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 9999999999999999999999999999999999999999999999999999999999877543
No 51
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=9.5e-51 Score=462.10 Aligned_cols=369 Identities=22% Similarity=0.312 Sum_probs=274.3
Q ss_pred CCCCCHHHHHHHHHHhcCCChh----------hHHHHHHHHHHHcCCCcc-cccccccCChhHHHHHHHHHHHhCCC--C
Q psy7366 44 NDRLTPREHLEFYSRVRNVPSV----------LLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALLGNP--P 110 (566)
Q Consensus 44 ~~~~tv~e~l~~~~~~~~~~~~----------~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~kqrl~iA~al~~~p--~ 110 (566)
+..++|.|.+.|.. ..+.+.. ++.++++ +|+.+||++. +++++.+|||||+|||+||+||+.+| +
T Consensus 434 ~~~~~v~~~~~~~~-~~~~~~~~~~~a~~~~~~i~~rl~-~L~~vGL~~l~l~r~~~~LSgGE~QRv~LA~aL~~~~~~~ 511 (943)
T PRK00349 434 VSELSIGEALEFFE-NLKLSEQEAKIAEPILKEIRERLK-FLVDVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGV 511 (943)
T ss_pred HhcCcHHHHHHHHH-hcCCChHHHHHHHHHHHHHHHHHH-HhhccccCCCCCCCchhhCCHHHHHHHHHHHHHhhCCCCc
Confidence 45689999999843 3333332 3455664 7899999876 89999999999999999999999997 9
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEE------eCCEEEEecChhHHHhhccCc
Q psy7366 111 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLGSATHLKSKSMAL 184 (566)
Q Consensus 111 vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl------~~G~i~~~g~~~~~~~~~~~~ 184 (566)
+|||||||++|||.++++|.++|+++++.|.|||+|||+++++. .||||++| ++|++++.|+++++.......
T Consensus 512 llILDEPtagLd~~~~~~L~~~L~~L~~~G~TVIvVeH~~~~i~-~aD~vi~LgpgaG~~~G~iv~~g~~~e~~~~~~~l 590 (943)
T PRK00349 512 LYVLDEPSIGLHQRDNDRLIETLKHLRDLGNTLIVVEHDEDTIR-AADYIVDIGPGAGVHGGEVVASGTPEEIMKNPNSL 590 (943)
T ss_pred EEEecCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-hCCEEEEeccccCCCCCEEeeccCHHHHhcChhhe
Confidence 99999999999999999999999999888999999999999987 59999999 999999999988864210000
Q ss_pred cccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccC
Q psy7366 185 PVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSN 264 (566)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (566)
. . ..+...
T Consensus 591 ~-------------~---~~l~~~-------------------------------------------------------- 598 (943)
T PRK00349 591 T-------------G---QYLSGK-------------------------------------------------------- 598 (943)
T ss_pred e-------------e---hhhccc--------------------------------------------------------
Confidence 0 0 000000
Q ss_pred CeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEE
Q psy7366 265 GTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLV 344 (566)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 344 (566)
.... .+. .. . ......|+
T Consensus 599 --------------------------------------------------~~~~----~~~---~~-~----~~~~~~L~ 616 (943)
T PRK00349 599 --------------------------------------------------KKIE----VPK---ER-R----KGNGKFLK 616 (943)
T ss_pred --------------------------------------------------cccc----ccc---cc-c----CCCcceEE
Confidence 0000 000 00 0 00113578
Q ss_pred EeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHH---------CCCCCCcc------------EE
Q psy7366 345 VKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLT---------GAIKPTSG------------NA 403 (566)
Q Consensus 345 ~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~---------G~~~~~~G------------~i 403 (566)
+++++. ..|+|+||+|++|++++|+|+||||||||++.+. +...+..+ -|
T Consensus 617 v~~l~~---------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v 687 (943)
T PRK00349 617 LKGARE---------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKVI 687 (943)
T ss_pred ecCCcc---------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCceE
Confidence 888852 2589999999999999999999999999998763 21111111 23
Q ss_pred EEcCccCCCc--------------hHHhc------CceEEEecCCCCCC-------------------------------
Q psy7366 404 YVMNHSIRDS--------------MDLVR------SYIGYCPQFDALND------------------------------- 432 (566)
Q Consensus 404 ~~~g~~~~~~--------------~~~~~------~~i~~v~q~~~l~~------------------------------- 432 (566)
.++-.++..+ .+.+. +..||.++.++++.
T Consensus 688 ~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C 767 (943)
T PRK00349 688 DIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDVC 767 (943)
T ss_pred EEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCccc
Confidence 3443332110 01110 12333333322221
Q ss_pred -----------------------CCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHH
Q psy7366 433 -----------------------RLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 433 -----------------------~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~l 488 (566)
++|+.|++.|+..... .....+.++.++|.. .+++++.+|||||+||+.|
T Consensus 768 ~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~------i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~L 841 (943)
T PRK00349 768 KGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPK------IARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKL 841 (943)
T ss_pred cCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchh------hhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHH
Confidence 3678888877654321 123467899999986 4799999999999999999
Q ss_pred HHHHcCCC---CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEE------ECCEEEEec
Q psy7366 489 AIALLGNP---PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLG 559 (566)
Q Consensus 489 a~al~~~p---~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l------~~G~i~~~g 559 (566)
|++|+.+| +++||||||+|||+..+..++++|+++.++|.|||++||+++++. .||++++| ++|++++.|
T Consensus 842 AraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~-~aD~ii~Lgp~~G~~~G~Iv~~G 920 (943)
T PRK00349 842 AKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK-TADWIIDLGPEGGDGGGEIVATG 920 (943)
T ss_pred HHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH-hCCEEEEecCCcCCCCCEEEEeC
Confidence 99999999 999999999999999999999999999888999999999999985 69999999 799999999
Q ss_pred Cccccc
Q psy7366 560 SATHLK 565 (566)
Q Consensus 560 ~~~~l~ 565 (566)
+++++.
T Consensus 921 t~~el~ 926 (943)
T PRK00349 921 TPEEVA 926 (943)
T ss_pred CHHHHH
Confidence 988764
No 52
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-51 Score=392.01 Aligned_cols=222 Identities=28% Similarity=0.447 Sum_probs=199.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC--chHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD--SMDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~--~~~~~~~ 419 (566)
+++++|+++.|+......++|++|||+|.+||++||+|++|||||||.++|+|+.+|++|+|.++|+++.. ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 68999999999843222359999999999999999999999999999999999999999999999987753 2335667
Q ss_pred ceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 420 YIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 420 ~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
.+-+||||| .+.|.+||.+.|.-+...++.++. ++++.++++.+||. .+++++|.+|||||+|||+|||||+.+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~--~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~P 160 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKS--QQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEP 160 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHH--HHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCC
Confidence 899999997 489999999999887776665544 34489999999997 5789999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++||||||||+||+..+.+++++|.+++++ +.|+|+||||+..+..+|||++||++|++++.++.+++.
T Consensus 161 klLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 161 KLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred CEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 999999999999999999999999999876 899999999999999999999999999999999988764
No 53
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-52 Score=405.05 Aligned_cols=219 Identities=25% Similarity=0.422 Sum_probs=200.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~~ 419 (566)
+|.++|+++.|+ ...+++|||++|+.||.++|+|||||||||||++|+|++.|++|+|.++|+.+... .....+
T Consensus 2 ~i~i~~~~~~~~----~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R 77 (345)
T COG1118 2 SIRINNVKKRFG----AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDR 77 (345)
T ss_pred ceeehhhhhhcc----cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhc
Confidence 478899999997 67799999999999999999999999999999999999999999999999944321 223356
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcC--CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRN--VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+||||||+..+|+.|||.+||.|+.+... .++...+.++.++|+.++|+.+.+++|.+|||||||||+|||||+.+|+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~eP~ 157 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPAQLSGGQRQRVALARALAVEPK 157 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhcCCC
Confidence 89999999999999999999999876542 2345667889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+||||||+++||...+..+...|+++.++ |.|+|+||||.+|+.++||||++|++|+|...|+++++
T Consensus 158 vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 158 VLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred eEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 99999999999999999999999999877 99999999999999999999999999999999999886
No 54
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.5e-51 Score=423.12 Aligned_cols=223 Identities=26% Similarity=0.416 Sum_probs=201.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h---HHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M---DLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~---~~~ 417 (566)
+|+++|+++.|+...+...+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|+++... . ...
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 478999999996321234799999999999999999999999999999999999999999999999988642 2 235
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+++|||+||++.+++.+||+||+.++....+.+.....+++.++++.+++.+..++++.+|||||||||+|||||+.+|+
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~ 160 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK 160 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhCCC
Confidence 77899999999999999999999987765555555566778999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||++||+.++..++++|+++.++ |.|||++|||++.+.++||++++|++|++++.|+++++
T Consensus 161 iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v 228 (343)
T TIGR02314 161 VLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEI 228 (343)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999875 99999999999999999999999999999999998765
No 55
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-52 Score=384.18 Aligned_cols=220 Identities=34% Similarity=0.518 Sum_probs=204.1
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~~ 419 (566)
.|.++|+.|+|+ .+.++++|||+|++||++||+|||||||||.+.++.|+.+|++|+|.+++.+++.. ..+.|.
T Consensus 4 ~L~a~~l~K~y~----kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 4 TLVAENLAKSYK----KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred EEEehhhhHhhC----CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 588999999997 67899999999999999999999999999999999999999999999999999863 456678
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCch--HHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSV--LLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
.|||+||+++.|..+||.||+.........+.+ +.+.+++++|+.|++.+..+++..+||||||+|+.|||||+.+|+
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCC
Confidence 899999999999999999999887776553333 334457899999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++||||||+|+||.+..++.++++.++..|..|+++-|+..+...+|||.+++++|++.++|+++++.
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~ 227 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIV 227 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999998863
No 56
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.6e-51 Score=422.22 Aligned_cols=221 Identities=37% Similarity=0.633 Sum_probs=203.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+++++|+++.|+ ++.+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++.......++.
T Consensus 40 ~~i~i~nl~k~y~----~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 40 VAIDLAGVSKSYG----DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred eeEEEEEEEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 4799999999997 567999999999999999999999999999999999999999999999999986544556788
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
+||+||++.+++.+|+.||+.++...++.+.......+.++++.+++.+..++++.+|||||||||+||+||+.+|++||
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLi 195 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQLLI 195 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999887665554444445667889999999998999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||||+||||.++..++++|++++++|.|||++||+++++.++|||+++|++|++++.|+++++.
T Consensus 196 LDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 260 (340)
T PRK13536 196 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALI 260 (340)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999878999999999999999999999999999999999988763
No 57
>KOG0062|consensus
Probab=100.00 E-value=1.8e-51 Score=422.59 Aligned_cols=376 Identities=20% Similarity=0.239 Sum_probs=270.1
Q ss_pred HHHHHHHcCCCc-ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCC
Q psy7366 71 VNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~-~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~ 149 (566)
..++|..+|++. ...+++.+||||+|-|++|||||..+||+||||||||+||..++.||.+.|..+ +.|+|+||||
T Consensus 178 ~~~~L~glGFt~emq~~pt~slSGGWrMrlaLARAlf~~pDlLLLDEPTNhLDv~av~WLe~yL~t~---~~T~liVSHD 254 (582)
T KOG0062|consen 178 YDKILAGLGFTPEMQLQPTKSLSGGWRMRLALARALFAKPDLLLLDEPTNHLDVVAVAWLENYLQTW---KITSLIVSHD 254 (582)
T ss_pred HHHHHHhCCCCHHHHhccccccCcchhhHHHHHHHHhcCCCEEeecCCcccchhHHHHHHHHHHhhC---CceEEEEecc
Confidence 344889999985 668899999999999999999999999999999999999999999999999865 4899999999
Q ss_pred hhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCcc-ccCCCCCCCCccchhHHHhhccCCCCccccCCCccccccccc
Q psy7366 150 MEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALP-VSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNE 227 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (566)
..|+..+|+.|+-+++=++- +.|+.+++.....+.. .....+.
T Consensus 255 r~FLn~V~tdIIH~~~~kL~~YkGN~~~Fvk~k~E~~~n~qrefe----------------------------------- 299 (582)
T KOG0062|consen 255 RNFLNTVCTDIIHLENLKLDYYKGNYSQFVKTKPEAKKNQQREFE----------------------------------- 299 (582)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHhhHHhhhhhhhhcc-----------------------------------
Confidence 99999999999999988874 6688887754321110 0000000
Q ss_pred ccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy7366 228 NIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSR 307 (566)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (566)
....+.+........+.|+.-.... ++ +..+
T Consensus 300 --------~q~~~R~h~q~fid~FrYna~ra~s-----------------------------------vq------SRIk 330 (582)
T KOG0062|consen 300 --------VQMKYRAHLQVFIDKFRYNAARASS-----------------------------------VQ------SRIK 330 (582)
T ss_pred --------hHHHHHHHHHHHHHHhccCcccchh-----------------------------------HH------HHHH
Confidence 0000011111112222221100000 00 0000
Q ss_pred hhcccccCCCCCCCcchhHHH-HHHhh-h-cCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCc
Q psy7366 308 CFTRSNLHPVPVSLEEDDVRK-ERERV-E-HGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAG 384 (566)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsG 384 (566)
+-...+...+..... ....+ . .....++.+++.++++.|.- +..+.+.+++++++.-+.++++|+||+|
T Consensus 331 ------~L~kl~~lk~~~~~~~~~~~fP~~~e~~~~p~l~i~~V~f~y~p--~~y~~~~~~~~d~e~~sRi~~vg~ng~g 402 (582)
T KOG0062|consen 331 ------MLGKLPALKSTLIEVLIGFLFPTEGEVLSPPNLRISYVAFEYTP--SEYQWRKQLGLDRESDSRISRVGENGDG 402 (582)
T ss_pred ------HhccCCCCCccceecccceecCCCCCcCCCCeeEEEeeeccCCC--cchhhhhccCCccchhhhhheeccCchh
Confidence 000000000000000 00000 0 11123467999999988863 2336899999999999999999999999
Q ss_pred HHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Q psy7366 385 KTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNK 464 (566)
Q Consensus 385 KSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 464 (566)
|||++|++.|...|.+|.+.+.+ |.+|+|.+|...=+.++++...-.+...+.+.+ ++.+++.+..
T Consensus 403 kst~lKi~~~~l~~~rgi~~~~~----------r~ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~----~ee~r~hl~~ 468 (582)
T KOG0062|consen 403 KSTLLKILKGDLTPTRGIVGRHP----------RLRIKYFAQHHVDFLDKNVNAVDFMEKSFPGKT----EEEIRRHLGS 468 (582)
T ss_pred HHHHHHHHhccCCcccceeeecc----------cceecchhHhhhhHHHHHhHHHHHHHHhCCCCC----HHHHHHHHHh
Confidence 99999999999999999887765 457999999754333344433222222223332 3456788999
Q ss_pred cCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhh
Q psy7366 465 FALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEAL 543 (566)
Q Consensus 465 ~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~ 543 (566)
||+. +...+++.+||||||-||++|.+...+|.+|+||||||+||..+...+.+.|+.+ +..||+||||.+++..+
T Consensus 469 ~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~fi~~~ 545 (582)
T KOG0062|consen 469 FGLSGELALQSIASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEFISSL 545 (582)
T ss_pred cCCCchhhhccccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHHHhhc
Confidence 9997 6777889999999999999999999999999999999999999999999888887 67899999999999999
Q ss_pred CCEEEEEECCEEEEe
Q psy7366 544 CTKLTIMVNGQFTCL 558 (566)
Q Consensus 544 ~drv~~l~~G~i~~~ 558 (566)
|+.+++.++|++.-.
T Consensus 546 c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 546 CKELWVVEDGKVTPI 560 (582)
T ss_pred CceeEEEcCCcEEee
Confidence 999999999998653
No 58
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-50 Score=420.28 Aligned_cols=219 Identities=24% Similarity=0.401 Sum_probs=200.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+|+++|+++.|+ +++.+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|+++..... .++.|
T Consensus 3 ~l~i~~l~~~~~---~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~-~~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYD---GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEP-ADRDI 78 (356)
T ss_pred EEEEEeEEEEeC---CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH-HHCCE
Confidence 589999999993 14679999999999999999999999999999999999999999999999998865322 24689
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
|||||++.+|+.+||+||+.+.....+.+..+...++.++++.++|.++.++++.+|||||||||+|||||+.+|++|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLL 158 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLF 158 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999887655555555567789999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||++||+.++..+.+.|+++.++ |.|+|+||||++++..+||++++|++|+++..|+++++
T Consensus 159 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~ 222 (356)
T PRK11650 159 DEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEV 222 (356)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 9999999999999999999998776 99999999999999999999999999999999998876
No 59
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-50 Score=395.43 Aligned_cols=220 Identities=28% Similarity=0.437 Sum_probs=205.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCC--CchHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIR--DSMDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~--~~~~~~~~ 419 (566)
+++++++++.|+. +..+|+++||+|++|++++|+|+||||||||+++++|+++|++|+|.++|.++. .....+++
T Consensus 3 ~i~~~~l~~~y~~---~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~ 79 (235)
T COG1122 3 MIEAENLSFRYPG---RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQ 79 (235)
T ss_pred eEEEEEEEEEcCC---CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhc
Confidence 6889999999973 258999999999999999999999999999999999999999999999999886 45667889
Q ss_pred ceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
++|||||+|. .+..-||.+.+.|+....+.+.++.++++.++++.+++.++.++++.+|||||||||+||.+|+.+|++
T Consensus 80 ~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~i 159 (235)
T COG1122 80 KVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEI 159 (235)
T ss_pred ceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCE
Confidence 9999999984 445569999999998888888888889999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.+++.++++++++.++ |+|||++|||++++..+|||+++|++|+++.+|+++++
T Consensus 160 liLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i 226 (235)
T COG1122 160 LLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEI 226 (235)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHH
Confidence 9999999999999999999999999887 79999999999999999999999999999999998765
No 60
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.3e-51 Score=386.76 Aligned_cols=217 Identities=33% Similarity=0.584 Sum_probs=208.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
++++++++|+|+ ++.+++|+||+|++|++.|++|||||||||.+|+|.|+++|++|+|.|+|.+++. ..+.+|
T Consensus 2 ~L~ie~vtK~Fg----~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~---~~~~rI 74 (300)
T COG4152 2 ALEIEGVTKSFG----DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQ---EIKNRI 74 (300)
T ss_pred ceEEecchhccC----ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhh---hhhhhc
Confidence 489999999997 7889999999999999999999999999999999999999999999999998854 345689
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
||+|.+..+|+.+||.|.+.|++.+.+++..+.+..+..||+++++.....+++.+||.|++||+.+..+++++|+++||
T Consensus 75 GyLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kIk~LSKGnqQKIQfisaviHePeLlIL 154 (300)
T COG4152 75 GYLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKIKELSKGNQQKIQFISAVIHEPELLIL 154 (300)
T ss_pred ccChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchHHHhhhhhhHHHHHHHHHhcCCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||||||||.+.+.+.+.+.+++++|.|||++||.|+.++++||++++|++|+.+.+|+.++++
T Consensus 155 DEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir 218 (300)
T COG4152 155 DEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIR 218 (300)
T ss_pred cCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988765
No 61
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-50 Score=393.95 Aligned_cols=219 Identities=43% Similarity=0.635 Sum_probs=197.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
|+++|+++.|+ ++.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.......+++++
T Consensus 1 i~~~~~~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYG----DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIG 76 (220)
T ss_pred CEEEEEEEEEC----CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEE
Confidence 46899999996 46799999999999999999999999999999999999999999999999887543344567899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+++|+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllD 156 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLD 156 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999988655444444444567889999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+|||+.+++.++++|++++++ |.|||++|||++++..+|||+++|++|+++..+++++++
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (220)
T cd03265 157 EPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEELK 220 (220)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHcC
Confidence 999999999999999999999876 899999999999999999999999999999999887753
No 62
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-50 Score=417.52 Aligned_cols=219 Identities=25% Similarity=0.415 Sum_probs=202.5
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
++|+++|+++.|+ ++.+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|+++..... .+++
T Consensus 5 ~~l~~~~l~~~~~----~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~-~~r~ 79 (351)
T PRK11432 5 NFVVLKNITKRFG----SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI-QQRD 79 (351)
T ss_pred cEEEEEeEEEEEC----CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH-HHCC
Confidence 4799999999996 4679999999999999999999999999999999999999999999999998865322 3467
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
+|||||++.+|+.+||.||+.|....++.+..+..+++.++++.+++.++.++++.+|||||||||+|||||+.+|++||
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLL 159 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLL 159 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999998766555555666789999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||++||+..+..+.+.|+++.++ |.|+|+||||.+++..+|||+++|++|+++..|+++++
T Consensus 160 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~ 224 (351)
T PRK11432 160 FDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQEL 224 (351)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999776 99999999999999999999999999999999999876
No 63
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.7e-50 Score=418.19 Aligned_cols=219 Identities=27% Similarity=0.391 Sum_probs=201.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+|+++|+++.|+ ++.+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|+++..... .++.+
T Consensus 4 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~-~~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFG----AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPP-QKRDY 78 (353)
T ss_pred EEEEEEEEEEeC----CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCH-HHCCE
Confidence 589999999997 4679999999999999999999999999999999999999999999999998865332 35679
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
||+||++.+|+.+||.||+.|+....+.+..+...++.++++.++|.++.++++.+|||||||||+|||||+.+|++|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLL 158 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPGLLLL 158 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999987655555555667899999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||++||+.++..+.+.|+++.++ |.|+|+||||++++..+|||+++|++|++++.|+++++.
T Consensus 159 DEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~ 223 (353)
T TIGR03265 159 DEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIY 223 (353)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999998776 999999999999999999999999999999999988763
No 64
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.7e-50 Score=411.15 Aligned_cols=220 Identities=38% Similarity=0.654 Sum_probs=199.5
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+++++|+++.|+ ++.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++.......+++
T Consensus 3 ~~i~~~~l~~~~~----~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 78 (303)
T TIGR01288 3 VAIDLVGVSKSYG----DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVA 78 (303)
T ss_pred cEEEEEeEEEEeC----CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhc
Confidence 3689999999996 467999999999999999999999999999999999999999999999999875444455778
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
+||+||++.+++.+|+.||+.++...++.+.......+.++++.+++.+..++++.+|||||||||+|||||+.+|++||
T Consensus 79 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (303)
T TIGR01288 79 IGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQLLI 158 (303)
T ss_pred EEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999876544444444445567889999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+|||+.++..++++|++++++|.|||++|||++++..+|||+++|++|+++..|+++++
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 222 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHAL 222 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999987899999999999999999999999999999999998775
No 65
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-50 Score=396.62 Aligned_cols=218 Identities=28% Similarity=0.448 Sum_probs=195.1
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h---HHhc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M---DLVR 418 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~---~~~~ 418 (566)
|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... . ...+
T Consensus 1 l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 76 (235)
T cd03261 1 IELRGLTKSFG----GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLR 76 (235)
T ss_pred CeEEEEEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHh
Confidence 46899999996 46799999999999999999999999999999999999999999999999887542 1 3456
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+.++|+||++.+++.+|+.||+.+..... ..+.......+.++++.+++.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~ 156 (235)
T cd03261 77 RRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALDPE 156 (235)
T ss_pred cceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 78999999999999999999998764432 23333445678889999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||+|||+.++..+++.|++++++ |+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 157 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 157 LLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHH
Confidence 99999999999999999999999998874 89999999999999999999999999999999988765
No 66
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-50 Score=375.67 Aligned_cols=218 Identities=23% Similarity=0.349 Sum_probs=200.2
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCc-----cEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTS-----GNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~-----G~i~~~g~~~~~--- 412 (566)
..++++|+++.|+ .+.+|+|||++|++++++||+||+|||||||||++..+..... |+|.++|+++..
T Consensus 6 ~~~~~~~l~~yYg----~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~ 81 (253)
T COG1117 6 PAIEVRDLNLYYG----DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKV 81 (253)
T ss_pred ceeEecceeEEEC----chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCC
Confidence 3689999999997 6789999999999999999999999999999999999987654 999999999965
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
..-.+|+++|+|||.|+.|| +|++||+.++.++++...+..++.++..|+...|. +.+++.+..||||||||++|
T Consensus 82 d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcI 160 (253)
T COG1117 82 DVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCI 160 (253)
T ss_pred CHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHH
Confidence 35678999999999999998 89999999999988877666778888889888773 46788899999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|+|||||||||+|||.+...|.++|.++++ ..|||+|||+|.-+.+++|+..+|..|++++.|+.+++
T Consensus 161 ARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~-~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 161 ARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK-KYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh-ccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999974 69999999999999999999999999999999998765
No 67
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.8e-50 Score=416.35 Aligned_cols=219 Identities=23% Similarity=0.374 Sum_probs=201.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCc--cEEEEcCccCCCchHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTS--GNAYVMNHSIRDSMDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~--G~i~~~g~~~~~~~~~~~~ 419 (566)
.|+++|+++.|+ ++.+|+|+||+|.+||+++|+|||||||||||++|+|+++|++ |+|.++|+++..... .++
T Consensus 5 ~l~~~~l~~~~~----~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~-~~r 79 (362)
T TIGR03258 5 GIRIDHLRVAYG----ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP-HKR 79 (362)
T ss_pred EEEEEEEEEEEC----CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH-HHC
Confidence 489999999997 4579999999999999999999999999999999999999999 999999998864322 346
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
.+||+||++.+|+.+||+||+.|+....+.+.....+++.++++.++|.+..++++.+|||||||||+|||||+.+|++|
T Consensus 80 ~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~ll 159 (362)
T TIGR03258 80 GLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVL 159 (362)
T ss_pred CEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 79999999999999999999999876555555566678899999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC--CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE--GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~--g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||||+|||+..+..+++.|+++.++ |.|+|+||||++++..+|||+++|++|+++..|+++++.
T Consensus 160 LLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 160 LLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999876 799999999999999999999999999999999988763
No 68
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-50 Score=384.08 Aligned_cols=221 Identities=31% Similarity=0.436 Sum_probs=202.4
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~ 418 (566)
.++++++++|+|+ +..+++||||+|++||+++|+||||||||||+|+|+|+++|++|+|.++|++++.. ....+
T Consensus 3 ~lL~v~~l~k~FG----Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar 78 (250)
T COG0411 3 PLLEVRGLSKRFG----GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIAR 78 (250)
T ss_pred ceeeeccceeecC----CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHh
Confidence 3688999999997 78899999999999999999999999999999999999999999999999999763 34567
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhc-------C-----CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVR-------N-----VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKL 486 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~-------~-----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv 486 (566)
..|+.-||.+.+|++|||.||+......+ . ....+..+++.++|+++||.+..+++.++||+|||+|+
T Consensus 79 ~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~LsyG~qR~L 158 (250)
T COG0411 79 LGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAGNLSYGQQRRL 158 (250)
T ss_pred ccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhhcCChhHhHHH
Confidence 88999999999999999999998753311 1 12345667899999999999999999999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
.|||||+.+|++||||||.+||.+....++.++|+++.++ |.||++|-|||+.+..+||||+||+.|+++++|+|++++
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHh
Confidence 9999999999999999999999999999999999999885 799999999999999999999999999999999999875
No 69
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.8e-48 Score=459.45 Aligned_cols=373 Identities=20% Similarity=0.286 Sum_probs=271.0
Q ss_pred CCCCHHHHHHHHHHhcCCC--h----hhHHHHHHHHHHHcCCCcc-cccccccCChhHHHHHHHHHHHhCCC--CEEEee
Q psy7366 45 DRLTPREHLEFYSRVRNVP--S----VLLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALLGNP--PLIFLD 115 (566)
Q Consensus 45 ~~~tv~e~l~~~~~~~~~~--~----~~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~kqrl~iA~al~~~p--~vLlLD 115 (566)
..|++.|-+.|........ . .++..|++ .|..+||++. +++.+.+|||||+|||+||+||+.+| ++||||
T Consensus 425 ~~m~i~~l~~~~~~l~~~~~~~~~il~ei~~RL~-~L~~vGL~~L~ldR~~~tLSGGE~QRV~LAraL~~~p~g~lLILD 503 (1809)
T PRK00635 425 QQMSLQELFIFLSQLPSKSLSIEEVLQGLKSRLS-ILIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILD 503 (1809)
T ss_pred hcCCHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH-HHHhccccCCCCCCchhhCCHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 3577888777765442100 0 12223333 3457899876 79999999999999999999999999 899999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEEe------CCEEEEecChhHHHhhccCccccCC
Q psy7366 116 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV------NGQFTCLGSATHLKSKSMALPVSGN 189 (566)
Q Consensus 116 EPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl~------~G~i~~~g~~~~~~~~~~~~~~~~~ 189 (566)
|||++||+.+++.|.++|++++++|.|||+||||++ +.++||||++|. +|++++.|+++++.....
T Consensus 504 EPTagLD~~~~~~L~~lL~~L~~~G~TVIvVeHd~~-vi~~aDrVi~L~pGag~~gG~Iv~~G~~~eil~~~~------- 575 (1809)
T PRK00635 504 EPSIGLHPQDTHKLINVIKKLRDQGNTVLLVEHDEQ-MISLADRIIDIGPGAGIFGGEVLFNGSPREFLAKSD------- 575 (1809)
T ss_pred CCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHhCCEEEEEcCCcccCCCEEEEecCHHHHhhChH-------
Confidence 999999999999999999999888999999999998 568899999996 789999998877632100
Q ss_pred CCCCCCccchhHHHhhccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeee
Q psy7366 190 DLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLV 269 (566)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (566)
.+...+...
T Consensus 576 ----------~l~~~~l~~------------------------------------------------------------- 584 (1809)
T PRK00635 576 ----------SLTAKYLRQ------------------------------------------------------------- 584 (1809)
T ss_pred ----------HHHHHHhcC-------------------------------------------------------------
Confidence 000000000
Q ss_pred eeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeE
Q psy7366 270 AVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLF 349 (566)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 349 (566)
. .... .+. .+. .....+++++++
T Consensus 585 -------------------------------------------~-~~~~---~~~----~~~------~~~~~L~l~~~~ 607 (1809)
T PRK00635 585 -------------------------------------------E-LTIP---IPE----KRT------NSLGTLTLSKAT 607 (1809)
T ss_pred -------------------------------------------c-cccc---Ccc----ccc------CCCCeEEEeccc
Confidence 0 0000 000 000 011257788875
Q ss_pred EEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHH---------HHHCCCCCCcc----E----EEEcCccCCC
Q psy7366 350 KIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFK---------MLTGAIKPTSG----N----AYVMNHSIRD 412 (566)
Q Consensus 350 ~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~---------~i~G~~~~~~G----~----i~~~g~~~~~ 412 (566)
. ..|+++||+|++||+++|+|+||||||||++ .|.|...+..+ . |.++-.++..
T Consensus 608 ~---------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~idQspigr 678 (1809)
T PRK00635 608 K---------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHITRDLPGR 678 (1809)
T ss_pred c---------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEecCCCCCC
Confidence 2 2699999999999999999999999999999 66665433111 1 2333332211
Q ss_pred c-----h------HHhc---------C-----ceEEEecC---------------------C-----------------C
Q psy7366 413 S-----M------DLVR---------S-----YIGYCPQF---------------------D-----------------A 429 (566)
Q Consensus 413 ~-----~------~~~~---------~-----~i~~v~q~---------------------~-----------------~ 429 (566)
. . ..+| + ...|.|+. . .
T Consensus 679 ~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~~e~L~~ 758 (1809)
T PRK00635 679 SQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFLPQVLEV 758 (1809)
T ss_pred CCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccCHHHHhh
Confidence 0 0 0111 0 01112221 0 1
Q ss_pred CCCCCCHHHHHHHHHHh---cCCCchHHHHHHHHHHHHcCCCCc-cccCcCcCChhHHHHHHHHHHHc---CCCCEEEEe
Q psy7366 430 LNDRLTPREHLEFYSRV---RNVPSVLLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALL---GNPPLIFLD 502 (566)
Q Consensus 430 l~~~~tv~e~l~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~LSgGqkqrv~la~al~---~~p~lllLD 502 (566)
.|...||.|++.+.... .........+++ ++++.+++... +++++.+|||||+||++||++|+ .+|++||||
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILD 837 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLD 837 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEe
Confidence 45678999999875431 122233444555 58899999876 79999999999999999999997 699999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE------CCEEEEecCccccc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV------NGQFTCLGSATHLK 565 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~------~G~i~~~g~~~~l~ 565 (566)
|||+|||+.+++.++++|++++++|.|||++||+++++ .+||++++|. +|++++.|+++++.
T Consensus 838 EPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpeel~ 905 (1809)
T PRK00635 838 EPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV-KVADYVLELGPEGGNLGGYLLASCSPEELI 905 (1809)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEEEEeCCHHHHH
Confidence 99999999999999999999988899999999999999 7899999996 78999999988763
No 70
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.5e-49 Score=406.88 Aligned_cols=218 Identities=31% Similarity=0.537 Sum_probs=200.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.++++|+++.|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.......++++
T Consensus 2 ~l~~~~l~~~~~----~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~i 77 (301)
T TIGR03522 2 SIRVSSLTKLYG----TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNI 77 (301)
T ss_pred EEEEEEEEEEEC----CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhce
Confidence 378999999996 4679999999999999999999999999999999999999999999999998865445567789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
||+||++.+++.+|+.||+.+....++.+.....+++.++++.+++.+..++++..|||||||||+||+||+.+|++|||
T Consensus 78 g~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~lliL 157 (301)
T TIGR03522 78 GYLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLIL 157 (301)
T ss_pred EEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999877666555444556788999999999889999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+|||+.+++.+++.|+++++ ++|||++||+++++.++|||+++|++|++++.|+++++
T Consensus 158 DEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (301)
T TIGR03522 158 DEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDEL 219 (301)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999865 79999999999999999999999999999999998876
No 71
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-49 Score=408.33 Aligned_cols=208 Identities=41% Similarity=0.694 Sum_probs=191.1
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHH
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPR 437 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~ 437 (566)
++.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++.......++++||+||++.+++.+|+.
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHH
Confidence 56799999999999999999999999999999999999999999999999988654445577899999999999999999
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHH
Q psy7366 438 EHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLW 517 (566)
Q Consensus 438 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 517 (566)
||+.+....++.+.....+++.++++.+++.+..++++.+|||||||||+||+||+.+|++|||||||+|||+.++..++
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 164 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIW 164 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHH
Confidence 99988766555554445567889999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 518 TCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 518 ~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++|++++++|.|||++||+++++..+||++++|++|++++.|++++++
T Consensus 165 ~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~ 212 (302)
T TIGR01188 165 DYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELK 212 (302)
T ss_pred HHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999877999999999999999999999999999999999987763
No 72
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-49 Score=411.60 Aligned_cols=223 Identities=26% Similarity=0.437 Sum_probs=199.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h---HHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M---DLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~---~~~ 417 (566)
+|+++|++++|+...+.+.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|.++... . ...
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 478999999996211135799999999999999999999999999999999999999999999999988642 1 234
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++++||+||++.+++.+|+.||+.+.....+.+.....+++.++++.+++.+..++++.+|||||||||+|||||+.+|+
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~ 160 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALASNPK 160 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 67899999999999999999999987655555444555678899999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||+|||+.++..++++|+++.++ |+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 161 iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~ 228 (343)
T PRK11153 161 VLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEV 228 (343)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999765 89999999999999999999999999999999988765
No 73
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.7e-49 Score=413.74 Aligned_cols=219 Identities=23% Similarity=0.403 Sum_probs=201.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+|+++|+++.|+ ++.+|+++||+|++||+++|+|||||||||||++|+|+++|++|+|.++|+++..... .++.
T Consensus 13 ~~L~l~~l~~~~~----~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~-~~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFD----GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPA-ENRH 87 (375)
T ss_pred ceEEEEEEEEEEC----CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH-HHCC
Confidence 4699999999996 4679999999999999999999999999999999999999999999999998865322 2467
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
+||+||++.+|+.+||.||+.|.....+.+.....+++.++++.++|.++.++++.+|||||||||+|||||+.+|++||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llL 167 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLL 167 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999987665555555556678999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||++||+.++..+++.|+++.++ |.|+|+||||.+++..+|||+++|++|+++..|+++++
T Consensus 168 LDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i 232 (375)
T PRK09452 168 LDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREI 232 (375)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999875 99999999999999999999999999999999998876
No 74
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.9e-48 Score=442.45 Aligned_cols=367 Identities=23% Similarity=0.337 Sum_probs=265.2
Q ss_pred CCCCHHHHHHHHHHhcCCCh----------hhHHHHHHHHHHHcCCCcc-cccccccCChhHHHHHHHHHHHhCCC--CE
Q psy7366 45 DRLTPREHLEFYSRVRNVPS----------VLLNTIVNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALLGNP--PL 111 (566)
Q Consensus 45 ~~~tv~e~l~~~~~~~~~~~----------~~~~~~~~~~l~~~gl~~~-~~~~~~~LSgG~kqrl~iA~al~~~p--~v 111 (566)
-.|||.|.+.|..... .+. .++.+++ +.+..+||+.. +++++.+|||||+|||.||++|+.+| ++
T Consensus 433 ~~~~v~~~~~~~~~l~-~~~~~~~ia~~i~~~i~~rl-~~L~~vgL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~l 510 (924)
T TIGR00630 433 SELSIREAHEFFNQLD-LTPEEKKIAEEILKEIKERL-GFLIDVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVL 510 (924)
T ss_pred hcCCHHHHHHHHHhcC-CChHHHHHHHHHHHHHHHHH-HhHhhccccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcE
Confidence 3578989888876532 111 1233344 34778899865 79999999999999999999999986 89
Q ss_pred EEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEE------eCCEEEEecChhHHHhhccCcc
Q psy7366 112 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLGSATHLKSKSMALP 185 (566)
Q Consensus 112 LlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl------~~G~i~~~g~~~~~~~~~~~~~ 185 (566)
|||||||+|||+.++++|.++|++++++|.|||+|+||++++. .||||++| ++|+|++.|+++++........
T Consensus 511 lILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd~~~i~-~aD~vi~LgpgaG~~~G~Iv~~g~~~el~~~~~~lt 589 (924)
T TIGR00630 511 YVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHDEETIR-AADYVIDIGPGAGIHGGEVVASGTPEEILANPDSLT 589 (924)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHh-hCCEEEEecccccCCCCEEeeccCHHHHhcCchhee
Confidence 9999999999999999999999999888999999999999986 89999999 9999999999887632110000
Q ss_pred ccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCC
Q psy7366 186 VSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNG 265 (566)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (566)
. ..+... .
T Consensus 590 --~--------------~~l~~~-----~--------------------------------------------------- 597 (924)
T TIGR00630 590 --G--------------QYLSGK-----K--------------------------------------------------- 597 (924)
T ss_pred --e--------------eccccc-----c---------------------------------------------------
Confidence 0 000000 0
Q ss_pred eeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEE
Q psy7366 266 TRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVV 345 (566)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (566)
... .+. .. . ......+++
T Consensus 598 --------------------------------------------------~~~---~~~----~~-~----~~~~~~l~l 615 (924)
T TIGR00630 598 --------------------------------------------------KIE---VPK----ER-R----PGNGKFLTL 615 (924)
T ss_pred --------------------------------------------------ccc---ccc----cc-c----CCCcceEEE
Confidence 000 000 00 0 001125888
Q ss_pred eeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHH-HHH--------C-CCCC-----------CccEEE
Q psy7366 346 KRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFK-MLT--------G-AIKP-----------TSGNAY 404 (566)
Q Consensus 346 ~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~-~i~--------G-~~~~-----------~~G~i~ 404 (566)
+|++. ..|+|+||+|++|++++|+|+||||||||++ +|. + ..+| -.--|.
T Consensus 616 ~~~~~---------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 686 (924)
T TIGR00630 616 KGARE---------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKVIH 686 (924)
T ss_pred EeCcc---------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCceEE
Confidence 88852 2599999999999999999999999999997 331 1 1111 011255
Q ss_pred EcCccCCCch-----------HHhcCc-------------------------------eEEEecCCCC------------
Q psy7366 405 VMNHSIRDSM-----------DLVRSY-------------------------------IGYCPQFDAL------------ 430 (566)
Q Consensus 405 ~~g~~~~~~~-----------~~~~~~-------------------------------i~~v~q~~~l------------ 430 (566)
++-.++..+. ..+|.. .|++.-+..+
T Consensus 687 vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~ 766 (924)
T TIGR00630 687 IDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCK 766 (924)
T ss_pred EecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCCcC
Confidence 5554442110 111111 1122111000
Q ss_pred ------------C--------CCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHH
Q psy7366 431 ------------N--------DRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 431 ------------~--------~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la 489 (566)
+ .++||.|.+.|+...... ....++++.+||.. .+++++.+|||||+||+.||
T Consensus 767 G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i------~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA 840 (924)
T TIGR00630 767 GKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSI------SRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLA 840 (924)
T ss_pred CceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccch------hHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHH
Confidence 1 135566665555432211 13457889999975 47999999999999999999
Q ss_pred HHHcC---CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEE------ECCEEEEecC
Q psy7366 490 IALLG---NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLGS 560 (566)
Q Consensus 490 ~al~~---~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l------~~G~i~~~g~ 560 (566)
++|+. +|+++||||||+|||+..+..+++.|+++.++|.|||++||+++++. .||++++| ++|++++.|+
T Consensus 841 ~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~-~aD~ii~Lgp~~G~~gG~iv~~G~ 919 (924)
T TIGR00630 841 KELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIK-TADYIIDLGPEGGDGGGTIVASGT 919 (924)
T ss_pred HHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-hCCEEEEecCCccCCCCEEEEeCC
Confidence 99997 59999999999999999999999999999888999999999999985 69999999 7999999999
Q ss_pred cccc
Q psy7366 561 ATHL 564 (566)
Q Consensus 561 ~~~l 564 (566)
++++
T Consensus 920 ~~~l 923 (924)
T TIGR00630 920 PEEV 923 (924)
T ss_pred HHHh
Confidence 8875
No 75
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-49 Score=386.51 Aligned_cols=212 Identities=32% Similarity=0.467 Sum_probs=189.4
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.... ..++.++
T Consensus 1 l~~~~l~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~-~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYG----SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP-PERRNIG 75 (213)
T ss_pred CeeeeeEEEeC----CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc-hhhccEE
Confidence 46889999996 467999999999999999999999999999999999999999999999999875422 2356799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllD 155 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLD 155 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999989989999999987654333333344566889999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.++..++++|++++++ |.|||++|||++++..+||++++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 156 EPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999998764 899999999999999999999999999998765
No 76
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.1e-49 Score=386.63 Aligned_cols=218 Identities=34% Similarity=0.581 Sum_probs=194.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+......++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++......+++.+
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 37899999999731111269999999999999999999999999999999999999999999999998865444556789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|+||++.+++.+|+.||+.+....++.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illl 160 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLL 160 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999998765544444444556788999999999888999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
||||+|||+.+++.+.++|++++++|.|||++|||++++..+||++++|++|++++.|
T Consensus 161 DEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 161 DEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred cCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999777999999999999999999999999999998754
No 77
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.1e-49 Score=411.22 Aligned_cols=218 Identities=24% Similarity=0.392 Sum_probs=198.1
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+|+++|+++.|+ ++.+|+|+||+|.+||+++|+||||||||||||+|+|+++|++|+|+++|+++.... ..++++
T Consensus 2 ~L~i~~l~~~~~----~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~-~~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFG----RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLH-ARDRKV 76 (353)
T ss_pred EEEEEEEEEEeC----CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCC-HHHCCE
Confidence 488999999996 467999999999999999999999999999999999999999999999999886422 234679
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhc----CCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVR----NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+|+||++.+|+.+||.||+.+..... ..+..+..+++.++++.++|.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~ 156 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQ 156 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999875432 22334456678999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||+|||+.++..+.+.|+++.++ |.|+|++|||++++..+|||+++|++|++++.|+++++
T Consensus 157 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i 224 (353)
T PRK10851 157 ILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQV 224 (353)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999876 89999999999999999999999999999999998876
No 78
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.7e-49 Score=386.50 Aligned_cols=212 Identities=27% Similarity=0.449 Sum_probs=188.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~~ 417 (566)
+++++|+++.|+. +.+.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ....
T Consensus 1 ~l~~~~l~~~~~~--~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (216)
T TIGR00960 1 MIRFEQVSKAYPG--GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFL 78 (216)
T ss_pred CeEEEEEEEEecC--CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHH
Confidence 4789999999962 124699999999999999999999999999999999999999999999999987431 1234
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++.++|+||++.+++.+|+.||+.+.....+.......+++.++++.+++.+..++++.+|||||||||+|||||+.+|+
T Consensus 79 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~ 158 (216)
T TIGR00960 79 RRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHKPP 158 (216)
T ss_pred HHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 67899999999999999999999886554443333445678899999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
+|||||||+|||+.+++.+.++|++++++|.|||++|||++++..+||++++|++|++
T Consensus 159 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 159 LLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999977799999999999999999999999999974
No 79
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-49 Score=412.64 Aligned_cols=218 Identities=25% Similarity=0.423 Sum_probs=198.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.|+++|+++.|+ ++.+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|+++..... .++.+
T Consensus 3 ~l~i~~l~~~~~----~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~-~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYG----DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP-AERGV 77 (369)
T ss_pred EEEEEEEEEEeC----CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH-hHCCE
Confidence 489999999996 4679999999999999999999999999999999999999999999999998864222 24579
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|+||++.+|+.+||.||+.+.....+.+.....+++.++++.+++.+..++++.+|||||||||+|||||+.+|++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLL 157 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLL 157 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999999876554444445556789999999999889999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+|||+.+++.+++.|+++.++ |.|+|++|||++++..+||++++|++|+++..|+++++
T Consensus 158 DEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i 221 (369)
T PRK11000 158 DEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLEL 221 (369)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999998765 89999999999999999999999999999999998765
No 80
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-49 Score=412.05 Aligned_cols=219 Identities=26% Similarity=0.446 Sum_probs=201.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+|+++|+++.|+ +..+|+++||+|++||+++|+|||||||||||++|+|+.+|++|+|+++|+++.... ..++.
T Consensus 18 ~~l~l~~v~~~~~----~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~-~~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFD----GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVP-PYQRP 92 (377)
T ss_pred ceEEEEeEEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCC-HHHCC
Confidence 4699999999996 457999999999999999999999999999999999999999999999999886432 23568
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
+||+||++.+|+.+||.||+.+.....+.+..+..+++.++++.+++.+..++++.+|||||||||+|||||+.+|++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLL 172 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLL 172 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999987665555555566788999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||++||+..+..+.+.|+++.++ |.|+|++|||.+++..+|||+++|++|+++..|+++++
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~ 237 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEI 237 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHH
Confidence 99999999999999999999998765 99999999999999999999999999999999998876
No 81
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.7e-49 Score=385.30 Aligned_cols=220 Identities=52% Similarity=0.886 Sum_probs=196.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
|+++|+++.|+.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.......+++++
T Consensus 1 l~~~~l~~~~~~~--~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG--TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC--CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEE
Confidence 4689999999621 16799999999999999999999999999999999999999999999999987654345567899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|++|++.+++.+|+.+|+.+.....+.+.....+.+.++++.+++.+..++++.+||+|||||++|||||+.+|++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 158 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLD 158 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 99999999989999999988665544444344566889999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+|||+.+++.+.+.|+++++ +.|||++|||++++..+||++++|++|++++.|++++++
T Consensus 159 EP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 220 (220)
T cd03263 159 EPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQELK 220 (220)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHcC
Confidence 99999999999999999999876 599999999999999999999999999999999988764
No 82
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-49 Score=389.60 Aligned_cols=218 Identities=26% Similarity=0.422 Sum_probs=193.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++..... .++++
T Consensus 2 ~l~~~~l~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~-~~~~i 76 (239)
T cd03296 2 SIEVRNVSKRFG----DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV-QERNV 76 (239)
T ss_pred EEEEEeEEEEEC----CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc-cccce
Confidence 478999999996 4679999999999999999999999999999999999999999999999988753221 24679
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCC----CchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNV----PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+|++|++.+++.+|+.||+.+....... ......+.+.++++.+++.+..++++.+|||||||||+|||||+.+|+
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 156 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVEPK 156 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999889999999876443222 222334567889999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||+|||+.+++.++++|++++++ |+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 157 VLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEV 224 (239)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 99999999999999999999999999875 89999999999999999999999999999999988765
No 83
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=6.6e-49 Score=388.95 Aligned_cols=219 Identities=31% Similarity=0.467 Sum_probs=194.3
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h-HHhcCc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M-DLVRSY 420 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~-~~~~~~ 420 (566)
++++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... . ...+..
T Consensus 1 l~~~~l~~~~~----~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (236)
T cd03219 1 LEVRGLTKRFG----GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLG 76 (236)
T ss_pred CeeeeeEEEEC----CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcC
Confidence 46889999996 45699999999999999999999999999999999999999999999999987542 2 223567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCC----------CchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNV----------PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~----------~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~ 490 (566)
++|+||++.+++.+|+.||+.+....... ........+.++++.+++.+..++++.+|||||||||+|||
T Consensus 77 i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 77 IGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHH
Confidence 99999999999999999999876543211 12234456889999999998889999999999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||+.+|++|||||||+|||+.++..+++.|++++++|+|||++|||++++..+||++++|++|++++.|+++++.
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 999999999999999999999999999999998877899999999999999999999999999999999887753
No 84
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-49 Score=387.50 Aligned_cols=223 Identities=28% Similarity=0.446 Sum_probs=196.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h---HHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M---DLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~---~~~ 417 (566)
+|+++|+++.|+...+.+++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... . ...
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 478999999996310012799999999999999999999999999999999999999999999999987542 1 234
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++.++|+||++.+++.+|+.||+.+.....+.........+.++++.+++.+..++++.+||||||||++|||||+.+|+
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 160 (233)
T cd03258 81 RRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPK 160 (233)
T ss_pred HhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 67899999999999999999999876544443333445568899999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||+|||+.++..++++|++++++ |.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 161 lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (233)
T cd03258 161 VLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEV 228 (233)
T ss_pred EEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999998775 89999999999999999999999999999999988765
No 85
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-49 Score=387.98 Aligned_cols=224 Identities=28% Similarity=0.437 Sum_probs=206.4
Q ss_pred eEEEeeeEEEeCCcC--------------------CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCcc
Q psy7366 342 VLVVKRLFKIYANSK--------------------GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSG 401 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~--------------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G 401 (566)
.++++|++|-|++.. |...-++|+||+|+.|||+.|+|-+|||||||+++|.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 478888888887521 122357899999999999999999999999999999999999999
Q ss_pred EEEEcCccCCC-c----hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcC
Q psy7366 402 NAYVMNHSIRD-S----MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVR 476 (566)
Q Consensus 402 ~i~~~g~~~~~-~----~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 476 (566)
+|.++|+++.. + ....++++++|||++.|+|..||.||+.|+....+.++.+.++++.++++.+||..+.+++|.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 99999999854 2 223467899999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 477 TLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 477 ~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
+|||||||||.|||||+.+|+|||+|||||+|||--+.++.+.|.+++++ ++|||+||||++|+.++.|||.+|++|+|
T Consensus 164 eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~i 243 (386)
T COG4175 164 ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEI 243 (386)
T ss_pred cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeE
Confidence 99999999999999999999999999999999999999999999999876 99999999999999999999999999999
Q ss_pred EEecCccccc
Q psy7366 556 TCLGSATHLK 565 (566)
Q Consensus 556 ~~~g~~~~l~ 565 (566)
+..|+|+++.
T Consensus 244 vQ~Gtp~eIl 253 (386)
T COG4175 244 VQVGTPEEIL 253 (386)
T ss_pred EEeCCHHHHH
Confidence 9999999863
No 86
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.3e-49 Score=412.39 Aligned_cols=219 Identities=23% Similarity=0.440 Sum_probs=198.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+|+++|+++.|+ ++.+|+++||+|++||+++|+||||||||||||+|+|+++|++|+|+++|+++.. ....++++
T Consensus 3 ~L~~~nls~~y~----~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ 78 (402)
T PRK09536 3 MIDVSDLSVEFG----DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRR 78 (402)
T ss_pred eEEEeeEEEEEC----CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcc
Confidence 689999999997 5679999999999999999999999999999999999999999999999998865 34556778
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhc--CC--CchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVR--NV--PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~--~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
+||++|++.+++.+|+.||+.+....+ .. ......+++.++++.+++.+..++++.+|||||||||+|||||+++|
T Consensus 79 ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P 158 (402)
T PRK09536 79 VASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQAT 158 (402)
T ss_pred eEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999988999999998753211 11 13344567899999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++|||||||+|||+.++..++++|++++++|.|||++|||++++.++|||+++|++|+++..|+++++
T Consensus 159 ~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev 226 (402)
T PRK09536 159 PVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADV 226 (402)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999987789999999999999999999999999999999998875
No 87
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.6e-49 Score=386.79 Aligned_cols=218 Identities=33% Similarity=0.512 Sum_probs=194.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h-HHhcCc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M-DLVRSY 420 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~-~~~~~~ 420 (566)
++++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|+++... . ...++.
T Consensus 1 l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 76 (232)
T cd03218 1 LRAENLSKRYG----KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLG 76 (232)
T ss_pred CeEEEEEEEeC----CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhcc
Confidence 46899999996 45799999999999999999999999999999999999999999999999987542 2 223467
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
++|+||++.+++.+|+.||+.+.....+.........+.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~lll 156 (232)
T cd03218 77 IGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKFLL 156 (232)
T ss_pred EEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999999999876543333333345567899999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+|||+.+++.++++|+++.++|.|||++|||++++..+||++++|++|++++.|+.+++
T Consensus 157 lDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 157 LDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 9999999999999999999999987799999999999999999999999999999999987764
No 88
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7e-49 Score=408.15 Aligned_cols=207 Identities=26% Similarity=0.418 Sum_probs=191.2
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHh----cCceEEEecCCCCCC
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLV----RSYIGYCPQFDALND 432 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~----~~~i~~v~q~~~l~~ 432 (566)
++.+|+|+||+|++||+++|+|||||||||||++|+|+++|++|+|+++|+++.. ....+ ++.++|+||++.+|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 5679999999999999999999999999999999999999999999999999865 23333 678999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHH
Q psy7366 433 RLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGA 512 (566)
Q Consensus 433 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~ 512 (566)
.+||+||+.+.....+.+..+..+++.++++.++|....++++.+|||||||||+|||||+.+|++|||||||++||+.+
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~ 164 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLI 164 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 99999999987766565555566788999999999989999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 513 RRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 513 ~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+..+.+.+.++.++ |+|||++|||++++..+|||+++|++|+++..|+++++
T Consensus 165 r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei 217 (363)
T TIGR01186 165 RDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEI 217 (363)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999765 89999999999999999999999999999999998875
No 89
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-48 Score=382.57 Aligned_cols=216 Identities=27% Similarity=0.420 Sum_probs=191.0
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+...+.+++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .++.++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~----~~~~i~ 76 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG----PGPDRG 76 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc----ccCcEE
Confidence 4689999999621111579999999999999999999999999999999999999999999999988752 356799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+.+.....+.+.....+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 77 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLD 156 (220)
T cd03293 77 YVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLD 156 (220)
T ss_pred EEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 99999998888999999987655444443444567889999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEE--CCEEEEecCcc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMV--NGQFTCLGSAT 562 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~--~G~i~~~g~~~ 562 (566)
|||+|||+.++..++++|+++.+ .|.|||++|||++++..+||++++|+ +|+++++++.+
T Consensus 157 EPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 157 EPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 99999999999999999999865 48999999999999999999999999 79999887653
No 90
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-48 Score=378.89 Aligned_cols=210 Identities=34% Similarity=0.587 Sum_probs=189.7
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ ++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|+++.. ..++.++
T Consensus 1 l~~~~l~~~~~----~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~---~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFG----RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI---AARNRIG 73 (210)
T ss_pred CEEEEEEEEEC----CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH---HHHccEE
Confidence 46899999996 4579999999999999999999999999999999999999999999999987643 3456899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+.+....++.+.....+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllD 153 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILD 153 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999999987655444444444567889999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.+++.+.+.|++++++|.|||++|||++++..+||++++|++|++++.|
T Consensus 154 EP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 154 EPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999998877899999999999999999999999999998754
No 91
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.7e-48 Score=380.03 Aligned_cols=212 Identities=26% Similarity=0.460 Sum_probs=189.8
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..... .+++++
T Consensus 1 i~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~-~~~~i~ 75 (213)
T cd03301 1 VELENVTKRFG----NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPP-KDRDIA 75 (213)
T ss_pred CEEEeeEEEEC----CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc-ccceEE
Confidence 46899999996 4579999999999999999999999999999999999999999999999998754221 235799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++..|++||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllD 155 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMD 155 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999988888999999988654444444444567888999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.++..++++|++++++ |.|||++|||++++..+||++++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 156 EPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999764 899999999999999999999999999998865
No 92
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-48 Score=395.18 Aligned_cols=223 Identities=28% Similarity=0.465 Sum_probs=196.1
Q ss_pred eEEEeeeEEEeCCcCC-CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc---hHHh
Q psy7366 342 VLVVKRLFKIYANSKG-TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS---MDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~-~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~---~~~~ 417 (566)
.|+++|+++.|+...+ .+++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|+++... ....
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 3889999999963111 24699999999999999999999999999999999999999999999999988542 2345
Q ss_pred cCceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC--CccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 418 RSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG--HYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 418 ~~~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
++++||+||++. .+...||.||+.+.....+.+..+..+++.++++.++|. +..++++.+||||||||++|||||+.
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~ 161 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAM 161 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHc
Confidence 678999999973 333579999998865544555555566788999999997 67899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++|||||||+|||+.++..++++|++++++ |.|||++|||++++..+|||+++|++|+++++|+++++
T Consensus 162 ~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~ 232 (287)
T PRK13637 162 EPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREV 232 (287)
T ss_pred CCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999775 99999999999999999999999999999999988765
No 93
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-48 Score=392.40 Aligned_cols=220 Identities=25% Similarity=0.369 Sum_probs=195.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+++++|+++.|+. .+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....+++
T Consensus 4 ~l~~~~l~~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 80 (274)
T PRK13647 4 IIEVEDLHFRYKD---GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSK 80 (274)
T ss_pred eEEEEEEEEEeCC---CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhh
Confidence 6899999999952 3569999999999999999999999999999999999999999999999998854 23445678
Q ss_pred eEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 421 IGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 421 i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
++|+||++. .+...|+.||+.+.....+.......+++.++++.+++.+..++++.+|||||||||+|||||+.+|++|
T Consensus 81 i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~ll 160 (274)
T PRK13647 81 VGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVI 160 (274)
T ss_pred EEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999973 4456799999987654334444444567889999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.++..++++|++++++|.|||++|||++++.++|||+++|++|++++.|+++++
T Consensus 161 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 161 VLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999987799999999999999999999999999999999987654
No 94
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.1e-48 Score=385.16 Aligned_cols=219 Identities=25% Similarity=0.378 Sum_probs=195.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC---chHHhc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD---SMDLVR 418 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~---~~~~~~ 418 (566)
+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. .....+
T Consensus 1 ~l~~~~l~~~~~----~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (240)
T PRK09493 1 MIEFKNVSKHFG----PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIR 76 (240)
T ss_pred CEEEEeEEEEEC----CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHh
Confidence 378999999996 4679999999999999999999999999999999999999999999999998753 123456
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHH-hcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSR-VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++++|+||++.+++.+|+.||+.+... ..+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|+
T Consensus 77 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 156 (240)
T PRK09493 77 QEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPK 156 (240)
T ss_pred hceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcCCC
Confidence 789999999999988999999977532 2233333445667899999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||+|||+.++..+.++|++++++|+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 157 LMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999999999999987799999999999999999999999999999999987765
No 95
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.1e-48 Score=377.91 Aligned_cols=208 Identities=34% Similarity=0.525 Sum_probs=188.1
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ ++++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... ...++.++
T Consensus 1 l~~~~l~~~~~----~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYG----KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN-IEALRRIG 75 (208)
T ss_pred CEEEEEEEEEC----CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch-HHHHhhEE
Confidence 46899999996 46799999999999999999999999999999999999999999999999987543 34466799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+.++...... ..+.+.++++.+++.+..++++.+|||||||||+|||||+.+|++||||
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 151 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGI----RKKRIDEVLDVVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILD 151 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCC----cHHHHHHHHHHcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 999999999999999999886543322 1345788999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.+++.++++|++++++|.|||++|||++++..+||++++|++|++++.|
T Consensus 152 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 152 EPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999998877899999999999999999999999999998764
No 96
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4e-48 Score=399.84 Aligned_cols=225 Identities=24% Similarity=0.321 Sum_probs=198.4
Q ss_pred CCeEEEeeeEEEeCCcC---------CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccC
Q psy7366 340 GDVLVVKRLFKIYANSK---------GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 410 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~---------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~ 410 (566)
..+|+++||++.|+.+. +...+++|+||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|+++
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 35799999999996321 125699999999999999999999999999999999999999999999999988
Q ss_pred CCc----hHHhcCceEEEecCC--CCCCCCCHHHHHHHHHHhc--CCCchHHHHHHHHHHHHcCCC-CccccCcCcCChh
Q psy7366 411 RDS----MDLVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVR--NVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGG 481 (566)
Q Consensus 411 ~~~----~~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~--~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgG 481 (566)
... ...++++++||||++ .+++.+|+.+|+.+....+ .....+..+++.++++.+++. ...++++.+||||
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG 165 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGG 165 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHH
Confidence 542 223567899999997 5888999999998765433 244455566788999999995 5689999999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 482 NKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 482 qkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
|+|||+|||||+.+|++||+||||+|||+.++..++++|+++.++ |.|+|+||||++++..+|||+++|++|++++.|+
T Consensus 166 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~ 245 (331)
T PRK15079 166 QCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGT 245 (331)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcC
Confidence 999999999999999999999999999999999999999999875 9999999999999999999999999999999998
Q ss_pred cccc
Q psy7366 561 ATHL 564 (566)
Q Consensus 561 ~~~l 564 (566)
++++
T Consensus 246 ~~~i 249 (331)
T PRK15079 246 YDEV 249 (331)
T ss_pred HHHH
Confidence 8765
No 97
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-48 Score=385.44 Aligned_cols=219 Identities=31% Similarity=0.533 Sum_probs=195.0
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+. .+.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .....+..+
T Consensus 1 l~~~~l~~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 77 (242)
T cd03295 1 IEFENVTKRYGG---GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKI 77 (242)
T ss_pred CEEEEEEEEeCC---cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcce
Confidence 468999999962 1569999999999999999999999999999999999999999999999998754 233456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC--ccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH--YSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
+|+||++.+++.+|+.||+.+.....+.......+.+.++++.+++.. ..++++.+|||||||||+|||||+.+|++|
T Consensus 78 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 157 (242)
T cd03295 78 GYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLL 157 (242)
T ss_pred EEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999987654444333444567889999999986 789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.++..+.+.|++++++ |.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 158 llDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 223 (242)
T cd03295 158 LMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEI 223 (242)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999765 89999999999999999999999999999999887654
No 98
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.9e-48 Score=381.09 Aligned_cols=212 Identities=26% Similarity=0.407 Sum_probs=185.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCch-----HHh
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSM-----DLV 417 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-----~~~ 417 (566)
|+++|+++.|+...+.+.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.... ...
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 468999999963111157999999999999999999999999999999999999999999999999875421 123
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++.++|+||++.+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+|||||||||+|||||+.+|+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 160 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARALANDPK 160 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccCCC
Confidence 56799999999999999999999886554443333345578899999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
+|||||||+|||+.++..+.++|+++++ +|+|||++|||++++. +||++++|++|++
T Consensus 161 lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 161 IILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999977 5899999999999987 9999999999974
No 99
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.4e-48 Score=383.81 Aligned_cols=218 Identities=31% Similarity=0.489 Sum_probs=193.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.......++.+
T Consensus 1 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i 76 (236)
T TIGR03864 1 ALEVAGLSFAYG----ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARL 76 (236)
T ss_pred CEEEEeeEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhE
Confidence 478999999996 4679999999999999999999999999999999999999999999999988754322334579
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|+||++.+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++|||
T Consensus 77 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llll 156 (236)
T TIGR03864 77 GVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPALLLL 156 (236)
T ss_pred EEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999998888899999998765444433334456688999999999888999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+|||+.+++.+++.|+++++ +|.|||++|||++++.. ||++++|++|++++.|+++++
T Consensus 157 DEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~~~~~~~~ 219 (236)
T TIGR03864 157 DEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLADGAAAEL 219 (236)
T ss_pred cCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEEeCCHHHH
Confidence 999999999999999999999875 58999999999999975 999999999999999987654
No 100
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-48 Score=385.67 Aligned_cols=219 Identities=27% Similarity=0.401 Sum_probs=192.7
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHHhc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDLVR 418 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~~~ 418 (566)
++++|+++.|+. ++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|+++... ....+
T Consensus 1 l~~~~l~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 77 (241)
T cd03256 1 IEVENLSKTYPN---GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLR 77 (241)
T ss_pred CEEeeEEEecCC---ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHH
Confidence 468999999962 25799999999999999999999999999999999999999999999999987542 23456
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHh--------cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRV--------RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~--------~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~ 490 (566)
+.++|+||++.+++.+|+.||+.+.... .+.......+++.++++.+++.+..++++.+|||||||||+|||
T Consensus 78 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 78 RQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred hccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHHHH
Confidence 7899999999999989999999764321 11122233456788999999988889999999999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHh
Confidence 999999999999999999999999999999998764 89999999999999999999999999999999988765
No 101
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.2e-48 Score=381.80 Aligned_cols=216 Identities=25% Similarity=0.393 Sum_probs=190.8
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC-----CCCccEEEEcCccCCCc---h
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI-----KPTSGNAYVMNHSIRDS---M 414 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~-----~~~~G~i~~~g~~~~~~---~ 414 (566)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++... .
T Consensus 1 i~~~~l~~~~~----~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 76 (227)
T cd03260 1 IELRDLNVYYG----DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDV 76 (227)
T ss_pred CEEEEEEEEcC----CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHH
Confidence 46899999996 457999999999999999999999999999999999999 99999999999987532 3
Q ss_pred HHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHcCCCCccccC--cCcCChhHHHHHHHHHH
Q psy7366 415 DLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPS-VLLNTIVNESLNKFALGHYSDRE--VRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 415 ~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~--~~~LSgGqkqrv~la~a 491 (566)
...+++++|+||++.++ .+|+.||+.+.....+... ....+++.++++.+++.+..+++ +.+||||||||++||||
T Consensus 77 ~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~a 155 (227)
T cd03260 77 LELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARA 155 (227)
T ss_pred HHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHH
Confidence 34567899999999888 7899999987654333222 22356678899999998776666 59999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+.+|++|||||||+|||+.++..++++|++++++ .|||++|||++++..+||++++|++|++++.|+++++
T Consensus 156 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 156 LANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999877 9999999999999999999999999999999988764
No 102
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-48 Score=393.33 Aligned_cols=222 Identities=25% Similarity=0.416 Sum_probs=195.8
Q ss_pred eEEEeeeEEEeCCcC-CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-----chH
Q psy7366 342 VLVVKRLFKIYANSK-GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-----SMD 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~-~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-----~~~ 415 (566)
+|+++|+++.|+... ..+.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|+++|.++.. ...
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 478999999996311 11359999999999999999999999999999999999999999999999998742 233
Q ss_pred HhcCceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHH
Q psy7366 416 LVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 416 ~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al 492 (566)
..++.+||+||++ .+++ .|+.||+.|.....+.+..+...++.++++.+++. ...++++.+||||||||++|||+|
T Consensus 81 ~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL 159 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGIL 159 (288)
T ss_pred HHHhhEEEEecCcchhccc-chHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHH
Confidence 4677899999987 4555 59999998876544555555566788999999996 577999999999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+.+|++|||||||+|||+.++..+.++|++++++|.|||++|||++++..+|||+++|++|+++++|+++++
T Consensus 160 ~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 160 AMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999987799999999999999999999999999999999998775
No 103
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-48 Score=377.32 Aligned_cols=211 Identities=33% Similarity=0.599 Sum_probs=189.3
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ ++++|+|+||+|++| +++|+||||||||||+++|+|+++|++|+|.++|+++.......+++++
T Consensus 1 i~~~~~~~~~~----~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYG----KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIG 75 (211)
T ss_pred CEEEEEEEEEC----CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheE
Confidence 46899999996 457999999999999 9999999999999999999999999999999999987643345567899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+.+.....+.+.....+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 155 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVD 155 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999987655444333344567889999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.+++.+.++|+++++ +.|||++|||++++..+|||+++|++|++++.|
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 156 EPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999876 599999999999999999999999999998764
No 104
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-48 Score=395.41 Aligned_cols=223 Identities=22% Similarity=0.365 Sum_probs=195.2
Q ss_pred eEEEeeeEEEeCCcC-CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC--------
Q psy7366 342 VLVVKRLFKIYANSK-GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-------- 412 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~-~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-------- 412 (566)
.|+++|+++.|+... ....+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999996311 12369999999999999999999999999999999999999999999999875421
Q ss_pred -----------------chHHhcCceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-Ccccc
Q psy7366 413 -----------------SMDLVRSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDR 473 (566)
Q Consensus 413 -----------------~~~~~~~~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~ 473 (566)
.....++++||+||++. .+...||.||+.|.....+.+.....+++.++++.++|. +..++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~ 161 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQR 161 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhC
Confidence 12345678999999862 333569999998876555556556667889999999996 68899
Q ss_pred CcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECC
Q psy7366 474 EVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNG 553 (566)
Q Consensus 474 ~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G 553 (566)
++.+|||||||||+|||||+.+|++|||||||+|||+.++..++++|++++++|.|||++|||++++..+|||+++|++|
T Consensus 162 ~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G 241 (305)
T PRK13651 162 SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDG 241 (305)
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999877999999999999999999999999999
Q ss_pred EEEEecCcccc
Q psy7366 554 QFTCLGSATHL 564 (566)
Q Consensus 554 ~i~~~g~~~~l 564 (566)
++++.|+++++
T Consensus 242 ~i~~~g~~~~~ 252 (305)
T PRK13651 242 KIIKDGDTYDI 252 (305)
T ss_pred EEEEECCHHHH
Confidence 99999998775
No 105
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5.3e-48 Score=389.67 Aligned_cols=220 Identities=25% Similarity=0.351 Sum_probs=195.5
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHH
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDL 416 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~ 416 (566)
.+|+++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... ...
T Consensus 6 ~~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (269)
T PRK11831 6 NLVDMRGVSFTRG----NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYT 81 (269)
T ss_pred ceEEEeCeEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHH
Confidence 4799999999996 46799999999999999999999999999999999999999999999999887531 123
Q ss_pred hcCceEEEecCCCCCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 417 VRSYIGYCPQFDALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 417 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
.+++++|+||++.+++.+|+.||+.+..... ..+.......+.++++.+++.+..++++.+|||||||||+|||||+.+
T Consensus 82 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~ 161 (269)
T PRK11831 82 VRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALE 161 (269)
T ss_pred HhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 4567999999999999999999998754322 223333445678899999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||||+|||+.+++.+.++|+++.++ |.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 162 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (269)
T PRK11831 162 PDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQAL 231 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999998765 89999999999999999999999999999999987765
No 106
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.5e-48 Score=378.11 Aligned_cols=210 Identities=27% Similarity=0.446 Sum_probs=187.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~~ 417 (566)
+++++|+++.|+. ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... ...+
T Consensus 1 ~l~~~~l~~~~~~---~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (214)
T TIGR02673 1 MIEFHNVSKAYPG---GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLL 77 (214)
T ss_pred CEEEEeeeEEeCC---CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 4789999999941 35799999999999999999999999999999999999999999999999987542 1235
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++.++|++|++.+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|+
T Consensus 78 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (214)
T TIGR02673 78 RRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFPEQLSGGEQQRVAIARAIVNSPP 157 (214)
T ss_pred HhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 67899999999999889999999886544433333445678899999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
+|||||||+|||+.++..+.++|++++++|+|||++|||++++..+||++++|++|+
T Consensus 158 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 158 LLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999987779999999999999999999999999985
No 107
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.7e-48 Score=385.57 Aligned_cols=219 Identities=26% Similarity=0.361 Sum_probs=195.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--------
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-------- 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-------- 413 (566)
+++++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (250)
T PRK11264 3 AIEVKNLVKKFH----GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKG 78 (250)
T ss_pred cEEEeceEEEEC----CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhh
Confidence 589999999996 45799999999999999999999999999999999999999999999999887431
Q ss_pred -hHHhcCceEEEecCCCCCCCCCHHHHHHHHHH-hcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHH
Q psy7366 414 -MDLVRSYIGYCPQFDALNDRLTPREHLEFYSR-VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 414 -~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 491 (566)
....++.++|+||++.+++.+|+.||+.+... ..........+.+.++++.+++....++++.+|||||||||+||||
T Consensus 79 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la~a 158 (250)
T PRK11264 79 LIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARA 158 (250)
T ss_pred HHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHHHH
Confidence 13456789999999999988999999987532 2233333445667889999999888899999999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+.+|++|||||||+|||+.++..++++|+++.++|.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 159 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 231 (250)
T PRK11264 159 LAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKAL 231 (250)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999987799999999999999999999999999999999987765
No 108
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-47 Score=379.53 Aligned_cols=220 Identities=24% Similarity=0.404 Sum_probs=191.7
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hH---H
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MD---L 416 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~---~ 416 (566)
++++++|+++.|+.+...+++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++... .. .
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 4699999999996321114699999999999999999999999999999999999999999999999987542 11 1
Q ss_pred h-cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 417 V-RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 417 ~-~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
. ++.++|+||++.+++.+|+.||+.+.....+.......+++.++++.+++.+..++++.+||||||||++|||||+.+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~~~ 163 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRPSELSGGERQRVAIARALVNN 163 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 2 367999999999999999999998765433333344456788999999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSA 561 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~ 561 (566)
|++|||||||+|||+.++..+.++|+++++ +|.|||++|||++++..+ |++++|++|++++.++.
T Consensus 164 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 164 PRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRM-SRQLEMRDGRLTAELSL 229 (233)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhh-CEEEEEECCEEEEEecc
Confidence 999999999999999999999999999876 489999999999999874 79999999999988764
No 109
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.9e-48 Score=379.89 Aligned_cols=217 Identities=29% Similarity=0.405 Sum_probs=191.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hH-HhcCc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MD-LVRSY 420 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~-~~~~~ 420 (566)
|+++|+++.|+ ++++|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++... .. ..++.
T Consensus 1 l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (222)
T cd03224 1 LEVENLNAGYG----KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAG 76 (222)
T ss_pred CEEeeEEeecC----CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcC
Confidence 46899999996 45799999999999999999999999999999999999999999999999887542 22 23567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHc-CCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKF-ALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
++|+||++.+++.+|+.||+.+...... .......+.++++.+ ++.+..++++.+||||||||++|||||+.+|++|
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ll 154 (222)
T cd03224 77 IGYVPEGRRIFPELTVEENLLLGAYARR--RAKRKARLERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLL 154 (222)
T ss_pred eEEeccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999999987654332 222344567788888 5777789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||||+|||+.++..++++|++++++|.|||++|||++++..+||++++|++|++++.|+++++.
T Consensus 155 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 155 LLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred EECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 999999999999999999999998777899999999999999999999999999999999887654
No 110
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-48 Score=405.95 Aligned_cols=223 Identities=26% Similarity=0.412 Sum_probs=196.1
Q ss_pred eEEEeeeEEEeCCcC--------------------CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCcc
Q psy7366 342 VLVVKRLFKIYANSK--------------------GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSG 401 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~--------------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G 401 (566)
+|+++|++|.|+... +...+|+|+||+|++||+++|+||||||||||+|+|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 477777777776321 123489999999999999999999999999999999999999999
Q ss_pred EEEEcCccCCCc-hH----HhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcC
Q psy7366 402 NAYVMNHSIRDS-MD----LVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVR 476 (566)
Q Consensus 402 ~i~~~g~~~~~~-~~----~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 476 (566)
+|+++|+++... .. ..+++++|+||++.+|+.+|+.||+.+.....+.+.....+++.++++.++|.+..++++.
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~ 163 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPD 163 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcc
Confidence 999999988642 11 1246799999999999999999999987655555444455678899999999988999999
Q ss_pred cCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 477 TLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 477 ~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
+|||||||||+|||||+.+|++|||||||+|||+.++..+++.|.++++ .|+|||++|||++++..+||++++|++|++
T Consensus 164 ~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i 243 (400)
T PRK10070 164 ELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEV 243 (400)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876 489999999999999999999999999999
Q ss_pred EEecCcccc
Q psy7366 556 TCLGSATHL 564 (566)
Q Consensus 556 ~~~g~~~~l 564 (566)
+..|+++++
T Consensus 244 ~~~g~~~~l 252 (400)
T PRK10070 244 VQVGTPDEI 252 (400)
T ss_pred EecCCHHHH
Confidence 999988765
No 111
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.2e-48 Score=377.60 Aligned_cols=213 Identities=22% Similarity=0.332 Sum_probs=189.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~~ 417 (566)
+++++|+++.|+. ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....
T Consensus 1 ~l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~ 77 (222)
T PRK10908 1 MIRFEHVSKAYLG---GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFL 77 (222)
T ss_pred CEEEEeeEEEecC---CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHH
Confidence 3789999999931 45799999999999999999999999999999999999999999999999887531 1234
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++.++|+||++.+++.+|+.||+.+.....+.........+.++++.+++.+..++++.+||||||||++|||||+.+|+
T Consensus 78 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (222)
T PRK10908 78 RRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPA 157 (222)
T ss_pred HhheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 67899999999888889999999876544444433445567889999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEE
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTC 557 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~ 557 (566)
+|||||||+|||+.+++.+.++|++++++|.|||++|||++++..+||++++|++|+++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 158 VLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999997778999999999999999999999999999854
No 112
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-48 Score=392.28 Aligned_cols=221 Identities=24% Similarity=0.386 Sum_probs=194.4
Q ss_pred EEEeeeEEEeCCcCC-CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-----chHH
Q psy7366 343 LVVKRLFKIYANSKG-TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-----SMDL 416 (566)
Q Consensus 343 l~~~~l~~~y~~~~~-~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-----~~~~ 416 (566)
++++|+++.|+.... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ....
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 789999999963211 2469999999999999999999999999999999999999999999999998742 2334
Q ss_pred hcCceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHc
Q psy7366 417 VRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 417 ~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
.++++||+||++ .++ ..||.||+.+.....+.+.....+++.++++.++|. ...++++.+|||||||||+|||||+
T Consensus 83 ~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~ 161 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLA 161 (290)
T ss_pred HHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 567899999997 355 469999998865444445555556788999999997 6679999999999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.+|++|||||||+|||+.++..++++|++++++ |.|||++|||++++..+|||+++|++|+++++|+++++
T Consensus 162 ~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~ 233 (290)
T PRK13634 162 MEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREI 233 (290)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999765 99999999999999999999999999999999988764
No 113
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-48 Score=391.16 Aligned_cols=222 Identities=23% Similarity=0.377 Sum_probs=194.2
Q ss_pred eEEEeeeEEEeCCcC-CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-----chH
Q psy7366 342 VLVVKRLFKIYANSK-GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-----SMD 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~-~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-----~~~ 415 (566)
.++++|+++.|+... ..+.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ...
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996211 02469999999999999999999999999999999999999999999999998743 123
Q ss_pred HhcCceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHH
Q psy7366 416 LVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 416 ~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al 492 (566)
..+..++|+||++ .++ .+|+.||+.+.............+++.++++.+++. ...++++.+||||||||++|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral 160 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVM 160 (287)
T ss_pred HHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHH
Confidence 4567899999997 355 579999998765433444444556788999999997 678999999999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+.+|++|||||||+|||+.++..+.++|++++++|.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 161 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 232 (287)
T PRK13641 161 AYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEI 232 (287)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999977799999999999999999999999999999999988765
No 114
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.2e-48 Score=352.86 Aligned_cols=215 Identities=22% Similarity=0.342 Sum_probs=191.7
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
+.++++.++|+. .-=.++++|+.||+++|+||+||||||||++|+|+..|.+|+|+++|++.+.... ..+-++
T Consensus 2 l~L~~V~~~y~~------~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P-~~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGH------LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPP-AERPVS 74 (231)
T ss_pred ccccceEEeeCc------ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCc-ccCChh
Confidence 567889999962 2346899999999999999999999999999999999999999999999865332 234599
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
++||+.++|..+||.+|+.++..-.-.-....+++++.++.++|+..+.++.|.+|||||||||+|||+|+++.+|||||
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLD 154 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILLLD 154 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEEec
Confidence 99999999999999999988654221123455678899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||++|||.-|.++..++.++..+ +.|++||||.++++.+++||++++++|+|.++|+.+++
T Consensus 155 EPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~ 217 (231)
T COG3840 155 EPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQEL 217 (231)
T ss_pred CchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHH
Confidence 999999999999999999999865 99999999999999999999999999999999998765
No 115
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-48 Score=365.49 Aligned_cols=220 Identities=30% Similarity=0.433 Sum_probs=196.2
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC--chHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD--SMDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~--~~~~~~ 418 (566)
.+|+++|++..|+ ...+|++|||++++||+++|+|+||+|||||||+|+|+.++.+|+|.++|++++. .....+
T Consensus 2 ~mL~v~~l~~~YG----~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r 77 (237)
T COG0410 2 PMLEVENLSAGYG----KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERAR 77 (237)
T ss_pred CceeEEeEeeccc----ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHh
Confidence 3689999999997 5789999999999999999999999999999999999999999999999999976 345678
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcC-CCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFA-LGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
..|+||||...+|+.+||.||+.++...... +.......+++.+.|- |.+..+++.++|||||||.++|||||+.+|+
T Consensus 78 ~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 78 LGIAYVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred CCeEeCcccccchhhCcHHHHHhhhhhcccc-cccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 8999999999999999999999886543221 1111222566777764 5677899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
+|+|||||.||-|.-.++|.+.|++++++ |.||++|-++..++.+++||.++|.+|+++.+|+.+++.
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~ 225 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELL 225 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHh
Confidence 99999999999999999999999999976 789999999999999999999999999999999988874
No 116
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.1e-47 Score=388.81 Aligned_cols=337 Identities=25% Similarity=0.375 Sum_probs=248.6
Q ss_pred HHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCC
Q psy7366 70 IVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHN 149 (566)
Q Consensus 70 ~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~ 149 (566)
+.+++.+.++|+..++|.+++||||+.||++||.|++++++++++||||++||...|-..-++++++.+.+++||++.||
T Consensus 193 ~~devve~l~L~nvl~r~v~~LSGGELQr~aIaa~l~rdADvY~FDEpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHD 272 (591)
T COG1245 193 KFDEVVERLGLENVLDRDVSELSGGELQRVAIAAALLRDADVYFFDEPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHD 272 (591)
T ss_pred cHHHHHHHhcchhhhhhhhhhcCchHHHHHHHHHHHhccCCEEEEcCCcccccHHHHHHHHHHHHHHhccCCeEEEEech
Confidence 56788999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCccccccccccc
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENI 229 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (566)
+.-++-++|-|.++.. +--.+|-... |.. ....+-..+.+
T Consensus 273 LavLD~lsD~vhI~YG-~pg~YGvvs~--------p~s---------vr~gIN~yL~G---------------------- 312 (591)
T COG1245 273 LAVLDYLSDFVHILYG-EPGVYGVVSK--------PKS---------VRVGINEYLKG---------------------- 312 (591)
T ss_pred HHHHHHhhheeEEEec-CCccceEecc--------chH---------HHHHHHHHHhc----------------------
Confidence 9999999999998863 2111111000 000 00000000000
Q ss_pred CCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy7366 230 DGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCF 309 (566)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (566)
+.+..
T Consensus 313 ------------------------------yl~~E--------------------------------------------- 317 (591)
T COG1245 313 ------------------------------YLPEE--------------------------------------------- 317 (591)
T ss_pred ------------------------------cCchh---------------------------------------------
Confidence 00000
Q ss_pred cccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHH
Q psy7366 310 TRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTF 389 (566)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl 389 (566)
+.+...-+ ..... .. ..........++..++.|.|+ -..|+-=.=+|+.||++|++||||.||||+.
T Consensus 318 -N~R~R~~~-I~F~~-----~~-~~~~~~~~~lv~y~~~~k~~g-----~F~L~V~~G~i~~gEvigilGpNgiGKTTFv 384 (591)
T COG1245 318 -NVRFRPEE-IEFEE-----KP-PRDDKARDTLVEYPDLKKTYG-----DFKLEVEEGEIYDGEVIGILGPNGIGKTTFV 384 (591)
T ss_pred -cccccccc-eeeec-----cC-cccccccceeeecchheeecC-----ceEEEecCCeeecceEEEEECCCCcchHHHH
Confidence 00000000 00000 00 000000022455666777764 1234333445677899999999999999999
Q ss_pred HHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC
Q psy7366 390 KMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH 469 (566)
Q Consensus 390 ~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 469 (566)
++|+|.++|++|. ..+ -+++|=||-..-..+.||.+.+.-..... .... ....++++-++|++
T Consensus 385 k~LAG~ikPdeg~----~~~---------~~vSyKPQyI~~~~~gtV~~~l~~~~~~~-~~~s---~~~~ei~~pl~l~~ 447 (591)
T COG1245 385 KLLAGVIKPDEGS----EED---------LKVSYKPQYISPDYDGTVEDLLRSAIRSA-FGSS---YFKTEIVKPLNLED 447 (591)
T ss_pred HHHhccccCCCCC----Ccc---------ceEeecceeecCCCCCcHHHHHHHhhhhh-cccc---hhHHhhcCccchHH
Confidence 9999999999997 222 25899999755455679998775433211 1111 12357888899999
Q ss_pred ccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEE
Q psy7366 470 YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLT 548 (566)
Q Consensus 470 ~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~ 548 (566)
.+++++..|||||.|||+||.+|..+++++|||||++.||.+.|-.+.+.|++..++ ++|.++|-||+-++.-++||++
T Consensus 448 i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~i 527 (591)
T COG1245 448 LLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLI 527 (591)
T ss_pred HHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEE
Confidence 999999999999999999999999999999999999999999999999999998865 8999999999999999999999
Q ss_pred EEE
Q psy7366 549 IMV 551 (566)
Q Consensus 549 ~l~ 551 (566)
|+.
T Consensus 528 vF~ 530 (591)
T COG1245 528 VFE 530 (591)
T ss_pred EEe
Confidence 985
No 117
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1e-47 Score=401.16 Aligned_cols=207 Identities=23% Similarity=0.378 Sum_probs=187.5
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCc----cCCC-ch---HHh-cCceEEEecCC
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNH----SIRD-SM---DLV-RSYIGYCPQFD 428 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~----~~~~-~~---~~~-~~~i~~v~q~~ 428 (566)
...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+ ++.. .. ... +++++|+||++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 567899999999999999999999999999999999999999999999996 3432 11 122 36899999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCC
Q psy7366 429 ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGM 508 (566)
Q Consensus 429 ~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gL 508 (566)
.+++.+|+.||+.+.....+.+..+...++.++++.++|.+..++++.+|||||||||+|||||+.+|+||||||||+||
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~L 195 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSAL 195 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 99999999999998765555555555677899999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 509 DPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 509 D~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+.++..+++.|.+++++ |+|||++|||++++.++|||+++|++|++++.|+++++
T Consensus 196 D~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei 252 (382)
T TIGR03415 196 DPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEI 252 (382)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999875 99999999999999999999999999999999998876
No 118
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-47 Score=394.45 Aligned_cols=224 Identities=26% Similarity=0.390 Sum_probs=195.9
Q ss_pred CCeEEEeeeEEEeCCcC-CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC------
Q psy7366 340 GDVLVVKRLFKIYANSK-GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD------ 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~-~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~------ 412 (566)
..+|+++|+++.|+... ..+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|+++|.++..
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 35799999999996311 12469999999999999999999999999999999999999999999999987643
Q ss_pred -----------chHHhcCceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcC
Q psy7366 413 -----------SMDLVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTL 478 (566)
Q Consensus 413 -----------~~~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~L 478 (566)
.....+++++||||++ .+++ .|+.||+.+.....+.+..+...++.++++.+++. ...++++.+|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~L 177 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGL 177 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccC
Confidence 1234677899999997 4665 59999998765433444445556788999999996 6789999999
Q ss_pred ChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEe
Q psy7366 479 SGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCL 558 (566)
Q Consensus 479 SgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~ 558 (566)
||||||||+|||||+.+|++|||||||+|||+.++..++++|+++.++|.|||++|||++++..+|||+++|++|++++.
T Consensus 178 SgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~ 257 (320)
T PRK13631 178 SGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKT 257 (320)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999877799999999999999999999999999999999
Q ss_pred cCcccc
Q psy7366 559 GSATHL 564 (566)
Q Consensus 559 g~~~~l 564 (566)
|+++++
T Consensus 258 g~~~~~ 263 (320)
T PRK13631 258 GTPYEI 263 (320)
T ss_pred CCHHHH
Confidence 998764
No 119
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-48 Score=381.87 Aligned_cols=219 Identities=34% Similarity=0.528 Sum_probs=195.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-ch-HHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SM-DLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~-~~~~~ 419 (566)
+++++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .. ...++
T Consensus 3 ~l~~~~l~~~~~----~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (241)
T PRK10895 3 TLTAKNLAKAYK----GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARR 78 (241)
T ss_pred eEEEeCcEEEeC----CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHh
Confidence 589999999996 4679999999999999999999999999999999999999999999999998754 22 23457
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
.++|+||++.+++.+|+.||+.+..... ..........+.++++.+++.+..++++.+|||||||||+|||||+.+|++
T Consensus 79 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (241)
T PRK10895 79 GIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKF 158 (241)
T ss_pred CeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 8999999999999899999998754332 122333456788999999998888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.++..+++++++++++|.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 224 (241)
T PRK10895 159 ILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224 (241)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHH
Confidence 999999999999999999999999887799999999999999999999999999999999988765
No 120
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9.9e-48 Score=374.86 Aligned_cols=210 Identities=25% Similarity=0.383 Sum_probs=187.1
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHHhc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDLVR 418 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~~~ 418 (566)
++++|+++.|+. .+.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... ....+
T Consensus 1 l~~~~l~~~~~~---~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 77 (214)
T cd03292 1 IEFINVTKTYPN---GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLR 77 (214)
T ss_pred CEEEEEEEEeCC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHH
Confidence 468999999962 35799999999999999999999999999999999999999999999999987531 12356
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
+.++|+||++.+++.+|+.||+.+.....+.......+++.++++.+++.+..++++.+||||||||++|||||+.+|++
T Consensus 78 ~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (214)
T cd03292 78 RKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNSPTI 157 (214)
T ss_pred HheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcCCCE
Confidence 78999999999999999999998865444333334456788999999998888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
|||||||+|||+.+++.+.+.|++++++|.|||++|||++++..+||++++|++|++
T Consensus 158 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 158 LIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999877799999999999999999999999999974
No 121
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-47 Score=384.02 Aligned_cols=219 Identities=23% Similarity=0.405 Sum_probs=193.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+++++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 2 ~l~~~~l~~~~~----~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (258)
T PRK13548 2 MLEARNLSVRLG----GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARR 77 (258)
T ss_pred eEEEEeEEEEeC----CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhh
Confidence 588999999996 4579999999999999999999999999999999999999999999999988754 23344567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHc------C
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALL------G 494 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~------~ 494 (566)
++|+||++.+++.+|+.||+.+...............+.++++.+++.+..++++.+|||||||||+|||||+ .
T Consensus 78 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~ 157 (258)
T PRK13548 78 RAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEPDG 157 (258)
T ss_pred eEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcccccCC
Confidence 9999999988788999999987543222222333456788999999988889999999999999999999999 5
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAV-SEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~-~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++|||||||+|||+.++..+.++|++++ ++|.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 158 PPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 999999999999999999999999999987 5689999999999999999999999999999999987764
No 122
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-47 Score=389.22 Aligned_cols=221 Identities=29% Similarity=0.430 Sum_probs=196.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+++++|+++.|+.. +.+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. .....+++
T Consensus 4 ~l~~~~l~~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13650 4 IIEVKNLTFKYKED-QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHK 82 (279)
T ss_pred eEEEEeEEEEcCCC-CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhh
Confidence 68999999999631 12459999999999999999999999999999999999999999999999998864 33445678
Q ss_pred eEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 421 IGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 421 i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
++|+||++. +++.+||.||+.+.....+....+..+++.++++.+++.+..++++.+||||||||++|||||+.+|++|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lL 162 (279)
T PRK13650 83 IGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPKII 162 (279)
T ss_pred ceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999974 6777899999987654444455555667899999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.++..++++|++++++ |.|||++|||++++. .|||+++|++|+++..|+++++
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~-~~dri~~l~~G~i~~~g~~~~~ 227 (279)
T PRK13650 163 ILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVA-LSDRVLVMKNGQVESTSTPREL 227 (279)
T ss_pred EEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999875 999999999999994 7999999999999999988764
No 123
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.7e-47 Score=380.30 Aligned_cols=218 Identities=27% Similarity=0.353 Sum_probs=193.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hH-HhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MD-LVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~-~~~~ 419 (566)
+|+++|+++.|+ ++++|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++... .. ..+.
T Consensus 2 ~i~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (242)
T TIGR03411 2 ILYLEGLSVSFD----GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARA 77 (242)
T ss_pred eEEEEeeEEEcC----CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhc
Confidence 689999999996 45799999999999999999999999999999999999999999999999887542 22 2346
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhc--------CCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHH
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVR--------NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~--------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 491 (566)
.++|+||++.+++.+|+.||+.+..... ..........+.++++.+++.+..++++.+|||||+|||+||||
T Consensus 78 ~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 78 GIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred CeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHH
Confidence 7999999999999999999998754311 11122345568899999999988899999999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+.+|++|||||||+|||+.++..++++|+++.+ +.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 9999999999999999999999999999999866 78999999999999999999999999999999987765
No 124
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.6e-48 Score=383.50 Aligned_cols=220 Identities=26% Similarity=0.393 Sum_probs=192.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~~ 417 (566)
+++++|+++.|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ....
T Consensus 1 ~l~~~~l~~~~~~---~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR02315 1 MLEVENLSKVYPN---GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKL 77 (243)
T ss_pred CeEEEeeeeecCC---CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHH
Confidence 3789999999951 35699999999999999999999999999999999999999999999999887531 1234
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHh--------cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHH
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRV--------RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~--------~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la 489 (566)
++.++|+||++.+++.+|+.||+.+.... .........+++.++++.+++....++++.+|||||||||+||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 78 RRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred HhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHH
Confidence 67899999999999999999999764211 1111233355688899999998888999999999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||+.+|++|||||||+|||+.++..+.++|++++++ |+|||++|||++++.++||++++|++|++++.|+++++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 9999999999999999999999999999999998765 89999999999999999999999999999999988765
No 125
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8e-48 Score=374.71 Aligned_cols=208 Identities=30% Similarity=0.497 Sum_probs=182.7
Q ss_pred EeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCceEE
Q psy7366 345 VKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYIGY 423 (566)
Q Consensus 345 ~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i~~ 423 (566)
++|+++.|+.. .+.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++.++|
T Consensus 2 ~~~l~~~~~~~--~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 2 LKNLSFSYPDG--ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred ceeEEEecCCC--CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 67899999621 1579999999999999999999999999999999999999999999999988754 23445678999
Q ss_pred EecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 424 CPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 424 v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
+||++. .++.+|+.||+.+.....+.........+.++++.+++.+..++++.+|||||||||+|||||+.+|++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllD 159 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLD 159 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 999975 3567899999987644333333334556788999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
|||+|||+.++..+++.|++++++|.|||++|||++++..+||++++|++|+
T Consensus 160 EPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 160 EPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999998779999999999999999999999999985
No 126
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2e-47 Score=380.98 Aligned_cols=217 Identities=24% Similarity=0.380 Sum_probs=193.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-----ccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT-----SGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~-----~G~i~~~g~~~~~---~ 413 (566)
+++++|+++.|+ +..+++|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|+++.. .
T Consensus 1 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~ 76 (247)
T TIGR00972 1 AIEIENLNLFYG----EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKID 76 (247)
T ss_pred CEEEEEEEEEEC----CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccc
Confidence 478999999996 456999999999999999999999999999999999999998 9999999998753 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|+||++.+++ .|+.||+.+.....+. +.......+.++++.+++. +..++++.+||||||||++|
T Consensus 77 ~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 155 (247)
T TIGR00972 77 VVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCI 155 (247)
T ss_pred hHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHH
Confidence 3345678999999998888 9999999876544332 2334456788999999997 67789999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..++++|+++++ +.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 156 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 156 ARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999876 48999999999999999999999999999999988765
No 127
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.6e-47 Score=382.29 Aligned_cols=220 Identities=22% Similarity=0.346 Sum_probs=195.3
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC--------
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-------- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-------- 412 (566)
..++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 4 ~~l~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 4 NKLNVIDLHKRYG----EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL 79 (257)
T ss_pred ccEEEeeeEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc
Confidence 4689999999996 4679999999999999999999999999999999999999999999999987642
Q ss_pred ------chHHhcCceEEEecCCCCCCCCCHHHHHHHHH-HhcCCCchHHHHHHHHHHHHcCCCCcc-ccCcCcCChhHHH
Q psy7366 413 ------SMDLVRSYIGYCPQFDALNDRLTPREHLEFYS-RVRNVPSVLLNTIVNESLNKFALGHYS-DREVRTLSGGNKR 484 (566)
Q Consensus 413 ------~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGqkq 484 (566)
.....+++++|+||++.+++.+|++||+.+.. ............++.++++.+++.+.. ++++.+|||||||
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~q 159 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQ 159 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHH
Confidence 12345678999999999999999999997643 223333344456788999999998754 8899999999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 485 KLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 485 rv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||+.+|++|||||||+|||+.+++.+.++|++++++|+|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (257)
T PRK10619 160 RVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQL 239 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 99999999999999999999999999999999999999987799999999999999999999999999999999987764
No 128
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-47 Score=381.52 Aligned_cols=212 Identities=25% Similarity=0.393 Sum_probs=189.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... ...+
T Consensus 1 ml~~~~l~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~----~~~~ 72 (255)
T PRK11248 1 MLQISHLYADYG----GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP----GAER 72 (255)
T ss_pred CEEEEEEEEEeC----CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC----CCcE
Confidence 478999999996 45799999999999999999999999999999999999999999999999887531 2358
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|++|++.+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+|||||||||+|||||+.+|++|||
T Consensus 73 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~lllL 152 (255)
T PRK11248 73 GVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLL 152 (255)
T ss_pred EEEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999998899999998765444444444456788999999998888999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEE--CCEEEEecCc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMV--NGQFTCLGSA 561 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~--~G~i~~~g~~ 561 (566)
||||+|||+.++..+.++|+++.+ +|.|||++|||++++..+||++++|+ +|++++.++.
T Consensus 153 DEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 153 DEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999854 58999999999999999999999998 5999988754
No 129
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-47 Score=386.99 Aligned_cols=219 Identities=25% Similarity=0.409 Sum_probs=192.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC---chHHhc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD---SMDLVR 418 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~---~~~~~~ 418 (566)
+|+++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....+
T Consensus 1 ml~~~~l~~~~~----~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 76 (271)
T PRK13638 1 MLATSDLWFRYQ----DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALR 76 (271)
T ss_pred CeEEEEEEEEcC----CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHH
Confidence 478999999996 4579999999999999999999999999999999999999999999999998742 223456
Q ss_pred CceEEEecCCCC-CCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 419 SYIGYCPQFDAL-NDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 419 ~~i~~v~q~~~l-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+.++|+||++.. +...|+.+|+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|+
T Consensus 77 ~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~p~ 156 (271)
T PRK13638 77 QQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQAR 156 (271)
T ss_pred hheEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcCCC
Confidence 789999999752 3456899999876444343333444567889999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||+|||+.++..+.++|++++++|.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 157 lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (271)
T PRK13638 157 YLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEV 223 (271)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999887789999999999999999999999999999999988764
No 130
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.1e-48 Score=372.67 Aligned_cols=203 Identities=30% Similarity=0.412 Sum_probs=179.9
Q ss_pred EeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEE
Q psy7366 345 VKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYC 424 (566)
Q Consensus 345 ~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 424 (566)
++|+++.|+. .+.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|+
T Consensus 2 ~~~l~~~~~~---~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~--~~~~~~i~~~ 76 (205)
T cd03226 2 IENISFSYKK---GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA--KERRKSIGYV 76 (205)
T ss_pred cccEEEEeCC---cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh--HHhhcceEEE
Confidence 5789999962 1679999999999999999999999999999999999999999999999988743 3345689999
Q ss_pred ecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeC
Q psy7366 425 PQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDE 503 (566)
Q Consensus 425 ~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDE 503 (566)
||++. .+..+|+.||+.++..... . ....+.++++.+++.+..++++.+||||||||++|||||+.+|++|||||
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~--~--~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDE 152 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELD--A--GNEQAETVLKDLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDE 152 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcC--c--cHHHHHHHHHHcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 99974 3345799999987543222 1 12467899999999988999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEE
Q psy7366 504 PTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFT 556 (566)
Q Consensus 504 Pt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~ 556 (566)
||+|||+.+++.+.++|++++++|.|||++|||++++..+||++++|++|+++
T Consensus 153 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 153 PTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999777999999999999999999999999999874
No 131
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.8e-47 Score=374.87 Aligned_cols=214 Identities=25% Similarity=0.412 Sum_probs=185.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hH---Hh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MD---LV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~---~~ 417 (566)
+++++|+++.|+...+.+++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... .. ..
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (221)
T TIGR02211 1 LLKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKL 80 (221)
T ss_pred CEEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHH
Confidence 378999999996322225699999999999999999999999999999999999999999999999987542 11 12
Q ss_pred c-CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 418 R-SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 418 ~-~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
+ +.++|+||++.+++.+|++||+.+.............+.+.++++.+++.+..++++.+|||||||||+|||||+.+|
T Consensus 81 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 160 (221)
T TIGR02211 81 RNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVNQP 160 (221)
T ss_pred HHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCC
Confidence 3 679999999999988999999987544333333334556789999999998889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEE
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFT 556 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~ 556 (566)
++|||||||+|||+.++..+.++|++++++ |.|||++|||++++.. ||++++|++|+++
T Consensus 161 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 161 SLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999999764 8999999999999865 8999999999975
No 132
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.4e-47 Score=373.58 Aligned_cols=209 Identities=24% Similarity=0.382 Sum_probs=186.6
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC---chHHhcC
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD---SMDLVRS 419 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~---~~~~~~~ 419 (566)
++++|+++.|+ ++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++
T Consensus 1 l~~~~l~~~~~----~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (213)
T cd03262 1 IEIKNLHKSFG----DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQ 76 (213)
T ss_pred CEEEEEEEEEC----CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHh
Confidence 46899999996 4579999999999999999999999999999999999999999999999998742 2234567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHH-hcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSR-VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
.++|+||++.+++.+|+.||+.+... ..+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++
T Consensus 77 ~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 156 (213)
T cd03262 77 KVGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMNPKV 156 (213)
T ss_pred cceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcCCCE
Confidence 89999999999998999999987542 22333334456778899999998888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
|||||||+|||+.+++.+.++|++++++|.|||++|||++++..+||++++|++|++
T Consensus 157 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 157 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999987789999999999999999999999999974
No 133
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-47 Score=388.21 Aligned_cols=222 Identities=23% Similarity=0.391 Sum_probs=194.6
Q ss_pred eEEEeeeEEEeCCcC-CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-----chH
Q psy7366 342 VLVVKRLFKIYANSK-GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-----SMD 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~-~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-----~~~ 415 (566)
.++++|+++.|+... ..+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.. ...
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996311 12469999999999999999999999999999999999999999999999998743 123
Q ss_pred HhcCceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHH
Q psy7366 416 LVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 416 ~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al 492 (566)
..+++|||+||++ .+++ .|+.||+.+.....+.+.....+++.++++.+|+. +..++++.+|||||||||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL 160 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL 160 (286)
T ss_pred HHHhheEEEecChHhccch-hhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 5677899999986 3555 59999998865444445555566788999999997 678899999999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+.+|++|||||||+|||+.++..+.++|+++.++ |.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 161 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 233 (286)
T PRK13646 161 AMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKEL 233 (286)
T ss_pred HhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999764 89999999999999999999999999999999988764
No 134
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-47 Score=392.62 Aligned_cols=224 Identities=24% Similarity=0.353 Sum_probs=197.6
Q ss_pred CeEEEeeeEEEeCCcCC------CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-
Q psy7366 341 DVLVVKRLFKIYANSKG------TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS- 413 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~- 413 (566)
.+|+++||++.|+...+ ...+|+||||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|+++...
T Consensus 4 ~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~ 83 (327)
T PRK11308 4 PLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKAD 83 (327)
T ss_pred ceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCC
Confidence 47999999999963211 25699999999999999999999999999999999999999999999999988542
Q ss_pred ---hHHhcCceEEEecCC--CCCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHH
Q psy7366 414 ---MDLVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKL 486 (566)
Q Consensus 414 ---~~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv 486 (566)
...++++|+||||++ .+++.+|+.+++......+ ........+++.++++.++|. ...++++.+|||||||||
T Consensus 84 ~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv 163 (327)
T PRK11308 84 PEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQRI 163 (327)
T ss_pred HHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHHH
Confidence 124567899999998 5888899999987655443 334444566789999999996 467999999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|++||+||||++||+.++..++++|.+++++ |.|||+||||++.+..+|||+++|++|++++.|+.+++
T Consensus 164 ~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~~~~ 242 (327)
T PRK11308 164 AIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKEQI 242 (327)
T ss_pred HHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999875 99999999999999999999999999999999988765
No 135
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-47 Score=378.41 Aligned_cols=219 Identities=24% Similarity=0.366 Sum_probs=194.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-------ch
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-------SM 414 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-------~~ 414 (566)
+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ..
T Consensus 2 ~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (242)
T PRK11124 2 SIQLNGINCFYG----AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred EEEEEeeEEEEC----CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhH
Confidence 478999999996 4679999999999999999999999999999999999999999999999997631 12
Q ss_pred HHhcCceEEEecCCCCCCCCCHHHHHHHH-HHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHc
Q psy7366 415 DLVRSYIGYCPQFDALNDRLTPREHLEFY-SRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 415 ~~~~~~i~~v~q~~~l~~~~tv~e~l~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
...+++++|+||++.+++.+|+.||+.+. ....+.........+.++++.+++....++++.+||||||||++|||||+
T Consensus 78 ~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~ 157 (242)
T PRK11124 78 RELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARALM 157 (242)
T ss_pred HHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 34567899999999999999999999752 22333333334556888999999988889999999999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.+|++|||||||+|||+.++..+.++|+++.++|+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 158 ~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 158 MEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred cCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 99999999999999999999999999999877799999999999999999999999999999999987765
No 136
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-48 Score=387.67 Aligned_cols=217 Identities=27% Similarity=0.415 Sum_probs=192.9
Q ss_pred EEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hH----Hhc
Q psy7366 344 VVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MD----LVR 418 (566)
Q Consensus 344 ~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~----~~~ 418 (566)
.++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++... .. ..+
T Consensus 26 ~~~~~~~~~~----~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 101 (269)
T cd03294 26 SKEEILKKTG----QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRR 101 (269)
T ss_pred hhhhhhhhcC----CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhc
Confidence 4668888886 56799999999999999999999999999999999999999999999999987542 11 124
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
++++|+||++.+++.+|+.||+.+.....+.........+.++++.+++.+..++++.+|||||||||+|||||+.+|++
T Consensus 102 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~i 181 (269)
T cd03294 102 KKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDI 181 (269)
T ss_pred CcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 67999999999998999999998865444333334455678899999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.+++.++++|.++.++ |.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 182 llLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 248 (269)
T cd03294 182 LLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEI 248 (269)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999998765 89999999999999999999999999999999987765
No 137
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-47 Score=386.56 Aligned_cols=221 Identities=25% Similarity=0.404 Sum_probs=196.4
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC---chHHh
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD---SMDLV 417 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~---~~~~~ 417 (566)
.+|+++|+++.|+. ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+
T Consensus 4 ~~l~~~~l~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~ 80 (283)
T PRK13636 4 YILKVEELNYNYSD---GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKL 80 (283)
T ss_pred ceEEEEeEEEEeCC---CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHH
Confidence 37999999999952 3569999999999999999999999999999999999999999999999998742 23446
Q ss_pred cCceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 418 RSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 418 ~~~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
++.+||+||++. .+...|+.||+.+.....+.+.....+++.++++.+++.+..++++.+||||||||++|||||+.+|
T Consensus 81 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~~p 160 (283)
T PRK13636 81 RESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEP 160 (283)
T ss_pred HhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 678999999973 3345799999987654444444445567889999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++|||||||+|||+.++..+.++|++++++ |.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 161 ~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 229 (283)
T PRK13636 161 KVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEV 229 (283)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999875 89999999999999999999999999999999998765
No 138
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-47 Score=385.57 Aligned_cols=219 Identities=25% Similarity=0.408 Sum_probs=194.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~~ 419 (566)
+++++|+++.|+. .+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++... ....++
T Consensus 1 ml~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (274)
T PRK13644 1 MIRLENVSYSYPD---GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRK 77 (274)
T ss_pred CEEEEEEEEEcCC---CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHh
Confidence 4789999999952 35699999999999999999999999999999999999999999999999987542 244567
Q ss_pred ceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
.++|+||++. .+...|+.||+.+.....+.......+.+.++++.+++.+..++++.+|||||||||+|||||+.+|++
T Consensus 78 ~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~l 157 (274)
T PRK13644 78 LVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEPEC 157 (274)
T ss_pred heEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999975 356689999998765443444444556788999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.++..++++|++++++|.|||++|||++++. .|||+++|++|++++.|+++++
T Consensus 158 llLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~ 222 (274)
T PRK13644 158 LIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIVLEGEPENV 222 (274)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999877999999999999985 6999999999999999987765
No 139
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-47 Score=385.04 Aligned_cols=220 Identities=26% Similarity=0.435 Sum_probs=195.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+++++|+++.|+. .+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. .....+++
T Consensus 3 ~l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 79 (277)
T PRK13652 3 LIETRDLCYSYSG---SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKF 79 (277)
T ss_pred eEEEEEEEEEeCC---CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 5889999999952 3469999999999999999999999999999999999999999999999998754 33455678
Q ss_pred eEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 421 IGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 421 i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
++|+||++. .+...|+.||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++|
T Consensus 80 i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~ll 159 (277)
T PRK13652 80 VGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVL 159 (277)
T ss_pred eEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999974 3346799999987554334444444567889999999998899999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.++..++++|++++++ |.|||++|||++++.++|||+++|++|++++.|+++++
T Consensus 160 ilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~ 225 (277)
T PRK13652 160 VLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEI 225 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999876 89999999999999999999999999999999998775
No 140
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-48 Score=351.93 Aligned_cols=219 Identities=23% Similarity=0.360 Sum_probs=203.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC---------
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD--------- 412 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~--------- 412 (566)
.|+++|+.|.|+ ...+|++||++.++|+++.|+|.+||||||+|+||.=+.+|+.|.|.++|+.+.-
T Consensus 6 ~l~v~dlHK~~G----~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~ 81 (256)
T COG4598 6 ALEVEDLHKRYG----EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLK 81 (256)
T ss_pred ceehhHHHhhcc----cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCee
Confidence 589999999997 6789999999999999999999999999999999999999999999999987631
Q ss_pred -----chHHhcCceEEEecCCCCCCCCCHHHHHHH-HHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHH
Q psy7366 413 -----SMDLVRSYIGYCPQFDALNDRLTPREHLEF-YSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKL 486 (566)
Q Consensus 413 -----~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv 486 (566)
...++|.++|+|||+++++..|||.||+.- +....+.++.+..++++.+|.++|+.+..+.+|..||||||||+
T Consensus 82 ~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~~LSGGQQQR~ 161 (256)
T COG4598 82 PADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYPAHLSGGQQQRV 161 (256)
T ss_pred eCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCccccCchHHHHH
Confidence 124577889999999999999999999854 34445778888888999999999999989999999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|+++|+|||||+|||+-..++++.+++++++|+|++++||+|.++..++.+|++|++|.|-++|+|+++
T Consensus 162 aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qv 239 (256)
T COG4598 162 AIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQV 239 (256)
T ss_pred HHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCChHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999875
No 141
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-47 Score=383.64 Aligned_cols=220 Identities=28% Similarity=0.422 Sum_probs=193.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC---chHHhc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD---SMDLVR 418 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~---~~~~~~ 418 (566)
+++++|+++.|+. .+.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ....++
T Consensus 1 ~l~~~~l~~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (275)
T PRK13639 1 ILETRDLKYSYPD---GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVR 77 (275)
T ss_pred CEEEEEEEEEeCC---CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHH
Confidence 4789999999962 3569999999999999999999999999999999999999999999999998742 223456
Q ss_pred CceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 419 SYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 419 ~~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+.|+|+||++. .+...|+.||+.+.....+.........+.++++.+++.++.++++.+|||||+||++|||||+.+|+
T Consensus 78 ~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~p~ 157 (275)
T PRK13639 78 KTVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMKPE 157 (275)
T ss_pred hheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 78999999973 33346999999875433333333445668899999999988999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||||+|||+.++..+.++|+++.++|.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 158 llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 224 (275)
T PRK13639 158 IIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEV 224 (275)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999987799999999999999999999999999999999998765
No 142
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-47 Score=377.49 Aligned_cols=217 Identities=25% Similarity=0.381 Sum_probs=191.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h-HHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M-DLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~-~~~~~ 419 (566)
+++++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... . ...++
T Consensus 5 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 80 (237)
T PRK11614 5 MLSFDKVSAHYG----KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMRE 80 (237)
T ss_pred EEEEEeEEEeeC----CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHh
Confidence 689999999996 46799999999999999999999999999999999999999999999999987542 2 23467
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHc-CCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKF-ALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
.++|++|++.+++.+|+.+|+.+..... ........+.++++.+ ++.+..++++.+||||||||++|||||+.+|++
T Consensus 81 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~i 158 (237)
T PRK11614 81 AVAIVPEGRRVFSRMTVEENLAMGGFFA--ERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRL 158 (237)
T ss_pred CEEEeccCcccCCCCcHHHHHHHhhhcc--ChhHHHHHHHHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCCE
Confidence 8999999999999899999998753221 1222334566777877 476667889999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.+++.+++.|++++++|.|||++|||++++.++|||+++|++|++++.|+++++
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (237)
T PRK11614 159 LLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDAL 224 (237)
T ss_pred EEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHH
Confidence 999999999999999999999999887799999999999999999999999999999999998765
No 143
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.4e-47 Score=373.88 Aligned_cols=218 Identities=27% Similarity=0.394 Sum_probs=185.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCch----HHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSM----DLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~----~~~ 417 (566)
+++++|+++.|+......++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.... ...
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 3789999999963111126999999999999999999999999999999999999999999999999875422 345
Q ss_pred cCceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCc-hHHHHH-HHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHH
Q psy7366 418 RSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPS-VLLNTI-VNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 418 ~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~-~~~~~~-~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al 492 (566)
++.++|++|++ .+++.+|+++|+.+......... ...... +.++++.+++. ...++++.+|||||||||+|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral 160 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARAL 160 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHH
Confidence 67899999998 46778999999987544332211 111122 35789999995 578999999999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
+.+|++|||||||+|||+.+++.+++.|++++++ |.|||++|||++++..+||++++|++|+++..|
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 161 ALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred hcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999999999999999876 899999999999999999999999999998764
No 144
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-47 Score=384.67 Aligned_cols=221 Identities=26% Similarity=0.407 Sum_probs=196.3
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
.+++++|+++.|+. ..+++|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++
T Consensus 4 ~~l~~~~l~~~~~~--~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (279)
T PRK13635 4 EIIRVEHISFRYPD--AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRR 81 (279)
T ss_pred ceEEEEEEEEEeCC--CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhh
Confidence 36899999999962 13569999999999999999999999999999999999999999999999998864 2334567
Q ss_pred ceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
.++|+||++. +++..|+.||+.+.....+.+.....+++.++++.++|.+..++++.+|||||||||+|||||+.+|++
T Consensus 82 ~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~l 161 (279)
T PRK13635 82 QVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDI 161 (279)
T ss_pred heEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999974 667789999998765444444444556789999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.++..++++|+++.++ |.|||++|||++++.. |||+++|++|++++.|+++++
T Consensus 162 llLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~ 227 (279)
T PRK13635 162 IILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQ-ADRVIVMNKGEILEEGTPEEI 227 (279)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHc-CCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999876 8999999999999975 999999999999999987764
No 145
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=7.1e-47 Score=372.51 Aligned_cols=217 Identities=25% Similarity=0.371 Sum_probs=188.2
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hH----
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MD---- 415 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~---- 415 (566)
.+|+++|+++.|+.......+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ..
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 4799999999996311113599999999999999999999999999999999999999999999999987542 11
Q ss_pred HhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 416 LVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 416 ~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
..+++++|+||++.+++.+|+.||+.+.......+.....+++.++++.+++.+..++++.+||||||||++|||||+.+
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrl~la~al~~~ 164 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARAFNGR 164 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 12357999999999999999999998754433333344456788999999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEe
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCL 558 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~ 558 (566)
|++|||||||+|||+.+++.+.++|++++++ |.|||++|||++++.. ||++++|++|++++.
T Consensus 165 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~-~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 165 PDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAAR-CDRRLRLVNGQLQEE 227 (228)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHh-CCEEEEEECCEEEec
Confidence 9999999999999999999999999998765 8999999999999855 999999999998753
No 146
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-47 Score=391.27 Aligned_cols=223 Identities=21% Similarity=0.275 Sum_probs=193.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC----CCccEEEEcCccCCCc-hH-
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK----PTSGNAYVMNHSIRDS-MD- 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~----~~~G~i~~~g~~~~~~-~~- 415 (566)
+|+++|+++.|+...+...+|+||||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|+++... ..
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 58999999999742222469999999999999999999999999999999999997 4899999999988542 21
Q ss_pred --H-hcCceEEEecCC--CCCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCCC---ccccCcCcCChhHHHHH
Q psy7366 416 --L-VRSYIGYCPQFD--ALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKL 486 (566)
Q Consensus 416 --~-~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgGqkqrv 486 (566)
. .++.|+|+||++ .+++.+|+.+++....... +....+..+++.++++.++|.+ ..++++.+|||||+|||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 1 235799999997 4788899998886654432 3344455677899999999964 46899999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|++||+||||++||+.++..++++|++++++ |.|+|+||||++++..+||||++|++|+|++.|+++++
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~ 241 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDI 241 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999864 99999999999999999999999999999999998765
No 147
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-47 Score=380.15 Aligned_cols=220 Identities=25% Similarity=0.345 Sum_probs=193.7
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~ 418 (566)
.+++++|+++.|+ ++++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 4 ~~l~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (255)
T PRK11300 4 PLLSVSGLMMRFG----GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIAR 79 (255)
T ss_pred ceEEEeeEEEEEC----CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHh
Confidence 3699999999996 46799999999999999999999999999999999999999999999999987542 22235
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHh----------cCC-----CchHHHHHHHHHHHHcCCCCccccCcCcCChhHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRV----------RNV-----PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNK 483 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~----------~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqk 483 (566)
..++|+||++.+++.+|+.||+.+.... ... ........+.++++.+++.+..++++.+||||||
T Consensus 80 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 80 MGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred cCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCChhhCCHHHH
Confidence 5699999999999999999999875321 000 0112234678889999998889999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcc
Q psy7366 484 RKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSAT 562 (566)
Q Consensus 484 qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~ 562 (566)
||++|||||+.+|++|||||||+|||+.++..++++|.+++++ |.|||++||+++++..+||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 9999999999999999999999999999999999999999876 899999999999999999999999999999999877
Q ss_pred cc
Q psy7366 563 HL 564 (566)
Q Consensus 563 ~l 564 (566)
++
T Consensus 240 ~~ 241 (255)
T PRK11300 240 EI 241 (255)
T ss_pred HH
Confidence 64
No 148
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-47 Score=380.14 Aligned_cols=219 Identities=25% Similarity=0.433 Sum_probs=193.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+++++|++++|+ ++.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 2 ~l~~~~l~~~~~----~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (255)
T PRK11231 2 TLRTENLTVGYG----TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARR 77 (255)
T ss_pred EEEEEeEEEEEC----CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhh
Confidence 588999999996 4679999999999999999999999999999999999999999999999987643 23344567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHH----hcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSR----VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~----~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
++|+||++.+++.+|+.||+.+... ..+.........+.++++.+++.+..++++.+|||||+|||+|||||+.+|
T Consensus 78 i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 157 (255)
T PRK11231 78 LALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLTDLSGGQRQRAFLAMVLAQDT 157 (255)
T ss_pred eEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999988888999999987421 111112233456788999999988889999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++|||||||+|||+.++..+.+.|++++++|.|||++|||++++.++||++++|++|+++..|+++++
T Consensus 158 ~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 225 (255)
T PRK11231 158 PVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEV 225 (255)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHh
Confidence 99999999999999999999999999877799999999999999999999999999999999987765
No 149
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-47 Score=382.18 Aligned_cols=220 Identities=23% Similarity=0.343 Sum_probs=194.5
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
.+|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++
T Consensus 10 ~~l~i~~l~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 10 TTFALRNVSFRVP----GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred ceEEEeeEEEEEC----CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 4799999999996 4579999999999999999999999999999999999999999999999988743 2334567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHH-hcC---CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSR-VRN---VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~-~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
.++|+||++.+++.+|+.||+.+... ... .......+.+.++++.+++.+..++++.+|||||||||+|||||+.+
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~ 165 (265)
T PRK10575 86 KVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQD 165 (265)
T ss_pred heEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 89999999888888999999986421 111 11223345678899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||||+|||+.+++.++++|.+++++ |.|||++||+++++..+||++++|++|+++..|+++++
T Consensus 166 p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 166 SRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHh
Confidence 9999999999999999999999999999765 89999999999999999999999999999999987765
No 150
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-47 Score=383.38 Aligned_cols=221 Identities=23% Similarity=0.388 Sum_probs=192.3
Q ss_pred EEEeeeEEEeCCcCC-CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-----chHH
Q psy7366 343 LVVKRLFKIYANSKG-TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-----SMDL 416 (566)
Q Consensus 343 l~~~~l~~~y~~~~~-~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-----~~~~ 416 (566)
|+++|+++.|+.... .+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. ....
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 789999999963110 1469999999999999999999999999999999999999999999999998753 1234
Q ss_pred hcCceEEEecCC--CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHc
Q psy7366 417 VRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 417 ~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
+++.|+|+||++ .+++ .|+.||+.+.....+.......+.+.++++.+++. ...++++.+||||||||++|||||+
T Consensus 83 ~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~ 161 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILA 161 (280)
T ss_pred HHhheEEEeeChhhhhcc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 567899999997 4555 69999998765433333444455678899999997 4679999999999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.+|++|||||||+|||+.+++.+.+.|++++++|+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 162 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 162 MEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999977789999999999999999999999999999999987765
No 151
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-47 Score=377.61 Aligned_cols=208 Identities=22% Similarity=0.325 Sum_probs=187.7
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
..|+++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..++.
T Consensus 11 ~~l~i~~l~~~~~----~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~----~~~~~ 82 (257)
T PRK11247 11 TPLLLNAVSKRYG----ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA----EARED 82 (257)
T ss_pred CcEEEEEEEEEEC----CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH----HhhCc
Confidence 4699999999996 467999999999999999999999999999999999999999999999987652 34567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
++|++|++.+++.+|+.||+.+... . .....+.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 83 i~~v~q~~~l~~~~tv~enl~~~~~-----~-~~~~~~~~~l~~~gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 83 TRLMFQDARLLPWKKVIDNVGLGLK-----G-QWRDAALQALAAVGLADRANEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred eEEEecCccCCCCCcHHHHHHhccc-----c-hHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999888999999986421 1 123567889999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSAT 562 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~ 562 (566)
|||||+|||+.++..+.++|.++.+ .|.|||++|||++++..+||++++|++|+++++++.+
T Consensus 157 LDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999865 4899999999999999999999999999999988654
No 152
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-46 Score=378.18 Aligned_cols=218 Identities=21% Similarity=0.329 Sum_probs=191.7
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCCc--
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRDS-- 413 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~~-- 413 (566)
++++++|+++.|+ ++.+|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++...
T Consensus 11 ~~l~~~~l~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 86 (258)
T PRK14268 11 PQIKVENLNLWYG----EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDV 86 (258)
T ss_pred eeEEEeeeEEEeC----CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccc
Confidence 4799999999996 45799999999999999999999999999999999999985 799999999887431
Q ss_pred -hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 -MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 -~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|+||++.+++ +|+.||+.+.....+.+.....+.+.++++.+++. +..++++.+|||||||||+|
T Consensus 87 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 165 (258)
T PRK14268 87 DVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCI 165 (258)
T ss_pred hHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHH
Confidence 2345678999999998887 89999998765444443333445678899999883 45688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..++++|+++++ |.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 166 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 166 ARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999864 79999999999999999999999999999999988765
No 153
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.6e-47 Score=373.69 Aligned_cols=215 Identities=30% Similarity=0.406 Sum_probs=189.4
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h-HHhcCc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M-DLVRSY 420 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~-~~~~~~ 420 (566)
|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... . ...++.
T Consensus 1 l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (230)
T TIGR03410 1 LEVSNLNVYYG----QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAG 76 (230)
T ss_pred CEEEeEEEEeC----CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhC
Confidence 46899999996 45799999999999999999999999999999999999999999999999887542 2 223567
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcC-CCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFA-LGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
++|+||++.+++.+|+.+|+.+........ ..+.+.++++.++ +....++++.+||||||||++|||||+.+|++|
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~il 153 (230)
T TIGR03410 77 IAYVPQGREIFPRLTVEENLLTGLAALPRR---SRKIPDEIYELFPVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLL 153 (230)
T ss_pred eEEeccCCcccCCCcHHHHHHHHHHhcCcc---hHHHHHHHHHHHHhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999999998765433221 2234567777776 566789999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.++..++++|.+++++ |.|||++||+++++..+||++++|++|++++.|+.+++
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 154 LLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 999999999999999999999998875 89999999999999999999999999999999998776
No 154
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8.4e-47 Score=377.56 Aligned_cols=218 Identities=22% Similarity=0.302 Sum_probs=193.3
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc---------
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--------- 413 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--------- 413 (566)
++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...
T Consensus 1 i~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 76 (252)
T TIGR03005 1 VRFSDVTKRFG----ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVP 76 (252)
T ss_pred CEEEEEEEEeC----CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccc
Confidence 46899999996 45799999999999999999999999999999999999999999999999877421
Q ss_pred -----hHHhcCceEEEecCCCCCCCCCHHHHHHHHHH-hcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHH
Q psy7366 414 -----MDLVRSYIGYCPQFDALNDRLTPREHLEFYSR-VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 414 -----~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~ 487 (566)
....++.++|++|++.+++..|+.||+.+... ..+.........+.++++.+++.+..++.+.+|||||+||++
T Consensus 77 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~ 156 (252)
T TIGR03005 77 ADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMPAQLSGGQQQRVA 156 (252)
T ss_pred cchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcChhhcCHHHHHHHH
Confidence 12456789999999999999999999987432 123333344556788999999988889999999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..+.++|+++.++ |.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 157 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T TIGR03005 157 IARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEI 234 (252)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998765 89999999999999999999999999999999987765
No 155
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-47 Score=368.54 Aligned_cols=210 Identities=20% Similarity=0.346 Sum_probs=183.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ ++. .|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++..... .++.++
T Consensus 1 i~~~~l~~~~~----~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~-~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYG----EQP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP-ADRPVS 73 (211)
T ss_pred CEEEeEEEEeC----CEe--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH-hHccEE
Confidence 46899999996 232 39999999999999999999999999999999999999999999998754322 246799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|++|++.+++.+|+.||+.+............++.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllD 153 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLLLD 153 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999986532111112233556889999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.++..++++|++++++ |.|||++|||++++..+|||+++|++|++++.|
T Consensus 154 EP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 154 EPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999998764 899999999999999999999999999998754
No 156
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.1e-46 Score=389.19 Aligned_cols=224 Identities=24% Similarity=0.345 Sum_probs=195.6
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---ccEEEEcCccCCCc-hH-
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT---SGNAYVMNHSIRDS-MD- 415 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~-~~- 415 (566)
.+|+++|+++.|....+...+|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|+++... ..
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~ 90 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKE 90 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHH
Confidence 47999999999964333457999999999999999999999999999999999999996 99999999998542 22
Q ss_pred --Hh-cCceEEEecCC--CCCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCCC---ccccCcCcCChhHHHHH
Q psy7366 416 --LV-RSYIGYCPQFD--ALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKL 486 (566)
Q Consensus 416 --~~-~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgGqkqrv 486 (566)
.+ ++.|+||||++ .+++.+|+.+++......+ +....+..+++.++++.++|.+ ..++++.+|||||+|||
T Consensus 91 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv 170 (330)
T PRK09473 91 LNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRV 170 (330)
T ss_pred HHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHH
Confidence 22 35799999998 5889999999987655433 2344445567889999999964 35789999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|++||+||||++||+.++..++++|++++++ |.|+|+||||++.+..+|||+++|++|+|++.|+++++
T Consensus 171 ~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~i 249 (330)
T PRK09473 171 MIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDV 249 (330)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999876 99999999999999999999999999999999998776
No 157
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.9e-47 Score=371.31 Aligned_cols=206 Identities=28% Similarity=0.485 Sum_probs=179.7
Q ss_pred EeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEE
Q psy7366 345 VKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYC 424 (566)
Q Consensus 345 ~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 424 (566)
++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. ..+++++|+
T Consensus 2 ~~~l~~~~~----~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~----~~~~~i~~v 73 (213)
T cd03235 2 VEDLTVSYG----GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE----KERKRIGYV 73 (213)
T ss_pred cccceeEEC----CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH----HHHhheEEe
Confidence 678999996 456999999999999999999999999999999999999999999999998753 345679999
Q ss_pred ecCCCCC--CCCCHHHHHHHHHHhcC----CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 425 PQFDALN--DRLTPREHLEFYSRVRN----VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 425 ~q~~~l~--~~~tv~e~l~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
||++.++ ..+|+.||+.+...... .......+++.++++.+++.+..++++.+||||||||++|||||+.+|++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~l 153 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIGELSGGQQQRVLLARALVQDPDL 153 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 9998763 34799999987532111 12223455688999999998888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||||||+|||+.++..+.+.|++++++|.|||++|||++++.++||++++|++| +++.|
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 154 LLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999998777899999999999999999999999886 55543
No 158
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-47 Score=374.40 Aligned_cols=222 Identities=23% Similarity=0.353 Sum_probs=197.3
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-C----CccEEEEcCccCCC-chH-
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-P----TSGNAYVMNHSIRD-SMD- 415 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-~----~~G~i~~~g~~~~~-~~~- 415 (566)
|+++||+..|....+...+++||||+|.+||++||+|.|||||||+.+.|+|+++ | .+|+|.++|+++.. +.+
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 7899999999765555679999999999999999999999999999999999998 3 57999999998754 222
Q ss_pred --Hh-cCceEEEecCC--CCCCCCCHHHHHHHHHHhcC-C-CchHHHHHHHHHHHHcCCCC---ccccCcCcCChhHHHH
Q psy7366 416 --LV-RSYIGYCPQFD--ALNDRLTPREHLEFYSRVRN-V-PSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRK 485 (566)
Q Consensus 416 --~~-~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~-~-~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgGqkqr 485 (566)
.+ .+.|+|+||+| .|.|-+||.+.+.-....+. . .+++..+++.++|+.+++.+ .++.+|++|||||+||
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQR 161 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQR 161 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHH
Confidence 22 36899999997 58899999998877665443 3 35566788999999999974 5799999999999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 486 LSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 486 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+||.||+.+|++||.||||++||...+.+|+++|++++++ |.++|+||||+..+.++||||+||+.|+|++.|+.+++
T Consensus 162 V~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~~~~i 241 (316)
T COG0444 162 VMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGPVEEI 241 (316)
T ss_pred HHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999875 99999999999999999999999999999999998775
No 159
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-47 Score=380.29 Aligned_cols=221 Identities=20% Similarity=0.295 Sum_probs=194.8
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhc
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVR 418 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~ 418 (566)
..+|+++|++++|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....+
T Consensus 5 ~~~l~i~~l~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 80 (265)
T PRK10253 5 VARLRGEQLTLGYG----KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVA 80 (265)
T ss_pred ccEEEEEEEEEEEC----CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHh
Confidence 34799999999997 4579999999999999999999999999999999999999999999999998754 233445
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHH-hc---CCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSR-VR---NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~-~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
..++|+||++.+++.+|+.||+.+... .. ..........+.++++.+++.+..++++.+||||||||++|||||+.
T Consensus 81 ~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~laral~~ 160 (265)
T PRK10253 81 RRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ 160 (265)
T ss_pred hheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcccCChHHHHHHHHHHHHhc
Confidence 679999999998888999999976421 10 01122334567889999999888899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++|||||||+|||+.++..+.++|.++.++ |.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 161 ~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 161 ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999765 89999999999999999999999999999999988765
No 160
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.9e-47 Score=377.88 Aligned_cols=218 Identities=24% Similarity=0.380 Sum_probs=193.1
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
|+++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 2 l~~~~l~~~~~----~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 77 (256)
T TIGR03873 2 LRLSRVSWSAG----GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRV 77 (256)
T ss_pred ceEEeEEEEEC----CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhhe
Confidence 67899999996 4679999999999999999999999999999999999999999999999998754 233445679
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHH-h---cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSR-V---RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~-~---~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+|+||++.+++.+|+.||+.+... . .........+++.++++.+++.+..++++.+||||||||++|||||+.+|+
T Consensus 78 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (256)
T TIGR03873 78 ALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMSTLSGGERQRVHVARALAQEPK 157 (256)
T ss_pred EEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 999999887788999999987421 1 111222334567889999999888899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++||||||+|||+.++..+.++|++++++|.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 158 LLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREV 224 (256)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHh
Confidence 9999999999999999999999999987789999999999999999999999999999999988765
No 161
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-46 Score=375.23 Aligned_cols=218 Identities=19% Similarity=0.284 Sum_probs=192.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC-chH
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD-SMD 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~-~~~ 415 (566)
+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. ...
T Consensus 3 ~l~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 78 (250)
T PRK14247 3 KIEIRDLKVSFG----QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVI 78 (250)
T ss_pred eEEEEeeEEEEC----CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHH
Confidence 589999999996 45799999999999999999999999999999999999974 69999999998754 334
Q ss_pred HhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC--CchHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHHHHHH
Q psy7366 416 LVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV--PSVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 416 ~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqrv~la 489 (566)
.+++.++|+||++.+++.+|+.||+.+....... ......+.+.++++.+++.+ ..++++.+|||||||||+||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 158 (250)
T PRK14247 79 ELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIA 158 (250)
T ss_pred HHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHH
Confidence 5567899999999888889999999876443222 22334556788999999853 56889999999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||+.+|++|||||||+|||+.++..+.+.|+++.+ |.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 159 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 159 RALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999854 89999999999999999999999999999999988765
No 162
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-46 Score=374.26 Aligned_cols=214 Identities=26% Similarity=0.387 Sum_probs=190.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|+++.|+ ++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.
T Consensus 3 ~l~~~~l~~~~~----~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 78 (241)
T PRK14250 3 EIEFKEVSYSSF----GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRK 78 (241)
T ss_pred eEEEEeEEEEeC----CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhc
Confidence 488999999996 4579999999999999999999999999999999999999999999999998753 23345678
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
++|+||++.+++ .|+.||+.+...... ....++.++++.+++. +..++++.+||||||||++|||||+.+|++|
T Consensus 79 i~~~~q~~~~~~-~tv~e~l~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~ll 153 (241)
T PRK14250 79 IGMVFQQPHLFE-GTVKDNIEYGPMLKG----EKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVL 153 (241)
T ss_pred EEEEecCchhch-hhHHHHHhcchhhcC----cHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998886 699999876433221 1234577899999996 5778999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.+++.+.+.|++++++ |.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (241)
T PRK14250 154 LLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDF 219 (241)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 999999999999999999999998774 99999999999999999999999999999999987765
No 163
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.6e-46 Score=378.14 Aligned_cols=224 Identities=25% Similarity=0.385 Sum_probs=194.4
Q ss_pred eEEEeeeEEEeCCc-----CCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h-
Q psy7366 342 VLVVKRLFKIYANS-----KGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M- 414 (566)
Q Consensus 342 ~l~~~~l~~~y~~~-----~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~- 414 (566)
+|+++|+++.|+.. .+++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... .
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 58899999999521 0135799999999999999999999999999999999999999999999999987542 1
Q ss_pred --HHhcCceEEEecCC--CCCCCCCHHHHHHHHHHh-cCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHH
Q psy7366 415 --DLVRSYIGYCPQFD--ALNDRLTPREHLEFYSRV-RNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 415 --~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~l 488 (566)
...++.++|+||++ .+++.+|+.||+.+.... ..........++.++++.+++. ...++++.+|||||||||+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 22467899999997 466789999999765432 2233333456788999999996 67899999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||+.+|++|||||||+|||+.++..++++|++++++ |.|||++|||++++..+||++++|++|++++.|+++++.
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHc
Confidence 99999999999999999999999999999999998875 899999999999999999999999999999999987763
No 164
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.7e-46 Score=378.33 Aligned_cols=224 Identities=25% Similarity=0.351 Sum_probs=193.6
Q ss_pred CeEEEeeeEEEeCCcC-----CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-ch
Q psy7366 341 DVLVVKRLFKIYANSK-----GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SM 414 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~-----~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~ 414 (566)
.+|+++|+++.|+... +.+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~ 82 (267)
T PRK15112 3 TLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDY 82 (267)
T ss_pred ceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCch
Confidence 3689999999996211 13569999999999999999999999999999999999999999999999998753 22
Q ss_pred HHhcCceEEEecCCC--CCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHH
Q psy7366 415 DLVRSYIGYCPQFDA--LNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 415 ~~~~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~ 490 (566)
...++.++|+||++. +++.+|+.+++.+..... ........+.+.++++.+++. ...++++.+|||||||||+|||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~lar 162 (267)
T PRK15112 83 SYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLAR 162 (267)
T ss_pred hhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHHH
Confidence 334567999999974 667889999988755432 223333445678999999994 6678899999999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||+.+|++|||||||+|||+.+++.+.++|.++.++ |.|||++||+++++..+||++++|++|+++..|+++++
T Consensus 163 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 237 (267)
T PRK15112 163 ALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTADV 237 (267)
T ss_pred HHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHH
Confidence 999999999999999999999999999999999765 89999999999999999999999999999999887765
No 165
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-46 Score=375.43 Aligned_cols=218 Identities=20% Similarity=0.313 Sum_probs=191.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCC--C-c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIR--D-S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~--~-~ 413 (566)
+|+++|+++.|+ ++++|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|+++|+++. . .
T Consensus 4 ~l~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 79 (253)
T PRK14267 4 AIETVNLRVYYG----SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVD 79 (253)
T ss_pred eEEEEeEEEEeC----CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccC
Confidence 689999999996 45799999999999999999999999999999999999987 4999999999875 2 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC--CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV--PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
...++++++|+||++.+++.+|+.||+.+....... +.......+.++++.+++. ...++++.+||||||||++
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 159 (253)
T PRK14267 80 PIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLV 159 (253)
T ss_pred hHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHH
Confidence 334567899999999999999999999876543322 2233345678889999874 3468899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..+.++|+++.+ ++|||++|||++++..+||++++|++|++++.|+++++
T Consensus 160 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (253)
T PRK14267 160 IARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKV 235 (253)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999865 69999999999999999999999999999999988765
No 166
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-46 Score=374.76 Aligned_cols=219 Identities=23% Similarity=0.315 Sum_probs=190.5
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~-- 412 (566)
.++|+++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 4 ~~~l~~~~l~~~~~----~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~ 79 (253)
T PRK14242 4 PPKMEARGLSFFYG----DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPH 79 (253)
T ss_pred CcEEEEeeeEEEEC----CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccc
Confidence 34799999999996 4579999999999999999999999999999999999974 589999999998753
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKL 486 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqrv 486 (566)
.....++.++|+||++.+++ .|+.||+.+.....+. ......+.+.++++.+++.+ ..++++.+|||||||||
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 158 (253)
T PRK14242 80 VDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRL 158 (253)
T ss_pred cCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHH
Confidence 22345678999999998887 5999999876543332 22234566788899999843 46888999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|++|||||||+|||+.++..+.++|+++.+ +.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999854 79999999999999999999999999999999988765
No 167
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.6e-46 Score=373.56 Aligned_cols=219 Identities=22% Similarity=0.301 Sum_probs=189.3
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC--CCCccEEEEcCccCCCc-hHH-hc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI--KPTSGNAYVMNHSIRDS-MDL-VR 418 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~--~~~~G~i~~~g~~~~~~-~~~-~~ 418 (566)
|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+|+|+|++ +|++|+|.++|+++... ... .+
T Consensus 1 l~~~~l~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR01978 1 LKIKDLHVSVE----DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERAR 76 (243)
T ss_pred CeEeeEEEEEC----CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhc
Confidence 46899999996 467999999999999999999999999999999999995 79999999999987542 222 34
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcC-------CCchHHHHHHHHHHHHcCCC-CccccCcC-cCChhHHHHHHHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRN-------VPSVLLNTIVNESLNKFALG-HYSDREVR-TLSGGNKRKLSTA 489 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~-------~~~~~~~~~~~~~l~~~~l~-~~~~~~~~-~LSgGqkqrv~la 489 (566)
..++|+||++.+++.+|+.||+.+...... .......+.+.++++.+++. ...++++. +|||||||||+||
T Consensus 77 ~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la 156 (243)
T TIGR01978 77 AGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEIL 156 (243)
T ss_pred cceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHH
Confidence 569999999999999999999977543211 11222345678899999997 46788887 5999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhh-CCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEAL-CTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~-~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||++++..+ ||++++|++|++++.|++++++
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 157 QMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhc
Confidence 999999999999999999999999999999999987789999999999999998 8999999999999999887543
No 168
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-46 Score=379.42 Aligned_cols=221 Identities=28% Similarity=0.451 Sum_probs=194.7
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
.+++++|+++.|+. +.+++|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++
T Consensus 6 ~~l~~~nl~~~~~~--~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 83 (271)
T PRK13632 6 VMIKVENVSFSYPN--SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRK 83 (271)
T ss_pred eEEEEEeEEEEcCC--CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhc
Confidence 37999999999952 14579999999999999999999999999999999999999999999999998854 2345577
Q ss_pred ceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
+++|+||++. .++.+|+.||+.+...............+.++++.+++.+..++++.+||||||||++|||||+.+|++
T Consensus 84 ~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 163 (271)
T PRK13632 84 KIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNPEI 163 (271)
T ss_pred ceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999974 667789999998765433333334455688999999999889999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.+++.++++|++++++ +.|||++||+++++. .||++++|++|+++..|+++++
T Consensus 164 llLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 164 IIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999998776 599999999999986 7999999999999999987664
No 169
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-46 Score=380.44 Aligned_cols=223 Identities=27% Similarity=0.405 Sum_probs=195.3
Q ss_pred CeEEEeeeEEEeCCcC--CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHH
Q psy7366 341 DVLVVKRLFKIYANSK--GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDL 416 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~--~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~ 416 (566)
++++++|+++.|+... +.+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 4799999999996321 135699999999999999999999999999999999999999999999999987542 244
Q ss_pred hcCceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 417 VRSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 417 ~~~~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
.++++||+||++. .+...|+.+|+.+.....+.+.....+.+.++++.+++.+..++++.+||||||||++|||||+.+
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~ 162 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAPHLLSGGQKQRVAIAGILAMR 162 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 5778999999974 233469999998865444444445566788999999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||||+|||+.++..+.+.|++++++ |.|||++|||++++.. ||++++|++|++++.|+++++
T Consensus 163 p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 163 PECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999764 9999999999999986 999999999999999998775
No 170
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.4e-47 Score=339.34 Aligned_cols=216 Identities=23% Similarity=0.346 Sum_probs=197.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHH-
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDL- 416 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~- 416 (566)
+|+++++++..+...+...+|++|+|.|.+||.++|+||+||||||||-+++|+..|++|+|++.|+++... ...
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 688999999988777788899999999999999999999999999999999999999999999999998642 222
Q ss_pred hcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 417 VRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 417 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
..+++|||||.+.+.|+||..||+..+..+.+-........+.++|+.+||...++.+|.+|||||||||+||||++..|
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiARAfa~~P 165 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALARAFAGRP 165 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCccccCchHHHHHHHHHHhcCCC
Confidence 34789999999999999999999999988877555556677899999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEe
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCL 558 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~ 558 (566)
+||+.||||.+||..+-..|.+++-.+.++ |.|.|+||||...+.+ |+|.+.|.+|+++++
T Consensus 166 ~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~R-c~R~~r~~~G~l~~~ 227 (228)
T COG4181 166 DVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAAR-CDRQLRLRSGRLVED 227 (228)
T ss_pred CEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHh-hhheeeeecceeccC
Confidence 999999999999999999999999998766 9999999999988876 999999999999753
No 171
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-46 Score=371.02 Aligned_cols=216 Identities=22% Similarity=0.372 Sum_probs=189.1
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+ +.. .++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|+++..... .++.+
T Consensus 1 ~l~~~~l~~~~~----~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~-~~~~i 73 (232)
T PRK10771 1 MLKLTDITWLYH----HLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP-SRRPV 73 (232)
T ss_pred CeEEEEEEEEEC----Ccc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh-hhccE
Confidence 378999999996 222 39999999999999999999999999999999999999999999998754222 24579
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|+||++.+++.+|+.||+.+..............++.++++.+++.+..++++.+||||||||++||||++.+|++|||
T Consensus 74 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllL 153 (232)
T PRK10771 74 SMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPGQLSGGQRQRVALARCLVREQPILLL 153 (232)
T ss_pred EEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999999997643211111223355688999999998889999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+|||+.+++.+.++|+++.++ |.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 154 DEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 217 (232)
T PRK10771 154 DEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDEL 217 (232)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999998764 89999999999999999999999999999999987765
No 172
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-46 Score=374.35 Aligned_cols=218 Identities=24% Similarity=0.334 Sum_probs=190.5
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~--- 412 (566)
.+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|+++|+++..
T Consensus 6 ~~l~~~~l~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 81 (254)
T PRK14273 6 AIIETENLNLFYT----DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNF 81 (254)
T ss_pred ceEEEeeeEEEeC----CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccc
Confidence 4799999999996 45699999999999999999999999999999999999997 48999999988742
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCC----CCccccCcCcCChhHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFAL----GHYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l----~~~~~~~~~~LSgGqkqrv~ 487 (566)
.....++.++|+||++.+++ +|++||+.+.....+. ......+.+.++++.+++ .+..++++.+|||||||||+
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~ 160 (254)
T PRK14273 82 DILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLC 160 (254)
T ss_pred cHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHH
Confidence 22345678999999988875 8999999876543332 222345567888999887 34578899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..++++|+++++ +.|||++|||++++..+|||+++|++|+++..|+++++
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 161 IARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE-SYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999864 79999999999999999999999999999999988765
No 173
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-46 Score=387.67 Aligned_cols=223 Identities=22% Similarity=0.259 Sum_probs=191.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC----CCccEEEEcCccCCC-chH-
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK----PTSGNAYVMNHSIRD-SMD- 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~----~~~G~i~~~g~~~~~-~~~- 415 (566)
+|+++|+++.|....+...+|+|+||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|+++.. ...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 68999999999533234579999999999999999999999999999999999997 589999999998854 221
Q ss_pred --H-hcCceEEEecCCC--CCCCCCHHHHHHHHHHhc---C---CCchHHHHHHHHHHHHcCCCC---ccccCcCcCChh
Q psy7366 416 --L-VRSYIGYCPQFDA--LNDRLTPREHLEFYSRVR---N---VPSVLLNTIVNESLNKFALGH---YSDREVRTLSGG 481 (566)
Q Consensus 416 --~-~~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~---~---~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgG 481 (566)
. .++.|+||||++. +++.+|+.+++....... + ....+..+++.++++.++|.+ ..++++.+||||
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG 162 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEG 162 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 1 2457999999975 678899999997543211 1 011234567889999999974 468999999999
Q ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 482 NKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 482 qkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
|||||+|||||+.+|++|||||||++||+.++..++++|+++.++ |.|||+||||++++..+|||+++|++|+|++.|+
T Consensus 163 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive~g~ 242 (330)
T PRK15093 163 ECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVETAP 242 (330)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 999999999999999999999999999999999999999999875 9999999999999999999999999999999998
Q ss_pred cccc
Q psy7366 561 ATHL 564 (566)
Q Consensus 561 ~~~l 564 (566)
++++
T Consensus 243 ~~~i 246 (330)
T PRK15093 243 SKEL 246 (330)
T ss_pred HHHH
Confidence 8765
No 174
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.8e-46 Score=371.37 Aligned_cols=202 Identities=32% Similarity=0.454 Sum_probs=179.6
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEe-cCCCCCCCCCH
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCP-QFDALNDRLTP 436 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~-q~~~l~~~~tv 436 (566)
.+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.......+++++|++ |++.+++.+|+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCccccCCCCcH
Confidence 56799999999999999999999999999999999999999999999999876443334567899998 55678888999
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHH
Q psy7366 437 REHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFL 516 (566)
Q Consensus 437 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l 516 (566)
.||+.+.....+.........+.++++.+++.+..++++.+||||||||++||+||+.+|++|||||||+|||+.+++.+
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l 192 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENI 192 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHH
Confidence 99998765544444444455678899999998888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 517 WTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 517 ~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
.++|.+++++ +.|||++||+++++..+||++++|++|++++.|
T Consensus 193 ~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 193 RNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999998765 899999999999999999999999999998764
No 175
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3e-46 Score=364.22 Aligned_cols=211 Identities=23% Similarity=0.393 Sum_probs=185.8
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ . ++.++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.... ..++.++
T Consensus 1 ~~~~~l~~~~~----~--~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYE----H--LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA-PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeC----C--cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC-hhccceE
Confidence 36899999995 2 468999999999999999999999999999999999999999999999875422 2456799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+.+.............+.+.++++.+++.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 153 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPEQLSGGQRQRVALARCLVRPNPILLLD 153 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999999999999976532211112223456788999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
|||+|||+.++..+.++|+++.++ |.|||++||+++++..+||++++|++|++++.|+
T Consensus 154 EPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 154 EPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999998765 8999999999999999999999999999998874
No 176
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-46 Score=369.25 Aligned_cols=217 Identities=27% Similarity=0.461 Sum_probs=194.1
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
+.++|++++|+ ++++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.++|+++..... .++.++
T Consensus 1 l~~~~l~~~~~----~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~-~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYG----GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP-HKRPVN 75 (232)
T ss_pred CEEEeEEEEeC----CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh-hhcceE
Confidence 46899999996 4679999999999999999999999999999999999999999999999998754222 256799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|++|++.+++.+|+.+|+.+.....+.........+.++++.+++.+..++.+.+||+||+||++|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKVLLLD 155 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999988999999987654443333344566788999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||+|||+.++..++++|++++++ |.|||++||+++++..+|||+++|++|++++.|+.+++
T Consensus 156 EP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~ 218 (232)
T cd03300 156 EPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEI 218 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHH
Confidence 999999999999999999999765 89999999999999999999999999999999987654
No 177
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-46 Score=380.82 Aligned_cols=222 Identities=25% Similarity=0.355 Sum_probs=191.0
Q ss_pred eEEEeeeEEEeCCcCC-CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC------ch
Q psy7366 342 VLVVKRLFKIYANSKG-TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD------SM 414 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~-~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~------~~ 414 (566)
.|+++|+++.|+.... ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ..
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 5899999999963110 1359999999999999999999999999999999999999999999999988742 22
Q ss_pred HHhcCceEEEecCCC--CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHH
Q psy7366 415 DLVRSYIGYCPQFDA--LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 415 ~~~~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~a 491 (566)
..+++.++|++|++. +++ .|+.||+.+.....+.........+.++++.+++. ...++++.+||||||||++||||
T Consensus 86 ~~~~~~i~~v~q~~~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lara 164 (289)
T PRK13645 86 KRLRKEIGLVFQFPEYQLFQ-ETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGI 164 (289)
T ss_pred HHHhccEEEEEeCcchhhhh-hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHH
Confidence 345678999999973 444 59999998764433333333445678899999995 67899999999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+.+|++|||||||+|||+.+++.++++|+++.++ |+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 165 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 238 (289)
T PRK13645 165 IAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEI 238 (289)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999998764 89999999999999999999999999999999987764
No 178
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-46 Score=379.48 Aligned_cols=221 Identities=28% Similarity=0.428 Sum_probs=195.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCc---cEEEEcCccCCC-chHH
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTS---GNAYVMNHSIRD-SMDL 416 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~---G~i~~~g~~~~~-~~~~ 416 (566)
.+|+++|+++.|+.. .+++|+++||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|+++.. ....
T Consensus 4 ~~l~i~~l~~~~~~~--~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~ 81 (282)
T PRK13640 4 NIVEFKHVSFTYPDS--KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWD 81 (282)
T ss_pred ceEEEEEEEEEcCCC--CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHH
Confidence 368999999999621 2469999999999999999999999999999999999999987 899999998854 2334
Q ss_pred hcCceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 417 VRSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 417 ~~~~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
.++++||+||++. +++..|+.||+.+.....+.......+++.++++.+++.+..++++.+|||||+||++|||||+.+
T Consensus 82 ~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral~~~ 161 (282)
T PRK13640 82 IREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGILAVE 161 (282)
T ss_pred HHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcC
Confidence 5678999999984 667789999998764444444444556788999999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||||+|||+.++..+.++|+++.++ |.|||++||+++++. +|||+++|++|++++.|+++++
T Consensus 162 P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~ 230 (282)
T PRK13640 162 PKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLAQGSPVEI 230 (282)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999765 899999999999985 7999999999999999988764
No 179
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.6e-46 Score=376.10 Aligned_cols=220 Identities=23% Similarity=0.399 Sum_probs=193.4
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---ccEEEEcCccCCCc----
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT---SGNAYVMNHSIRDS---- 413 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~---- 413 (566)
++|+++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|+ +|+|+++|.++...
T Consensus 3 ~~l~~~nl~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~ 78 (262)
T PRK09984 3 TIIRVEKLAKTFN----QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLA 78 (262)
T ss_pred cEEEEeeEEEEeC----CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccc
Confidence 3799999999996 467999999999999999999999999999999999999986 49999999887431
Q ss_pred --hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHh--------cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHH
Q psy7366 414 --MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRV--------RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNK 483 (566)
Q Consensus 414 --~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~--------~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqk 483 (566)
....+++++|+||++.+++.+|+.||+.+.... ...........+.++++.+++.+..++++.+||||||
T Consensus 79 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 79 RDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred hhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCccccCHHHH
Confidence 234467799999999999999999999764321 0111223345788999999998888999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcc
Q psy7366 484 RKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSAT 562 (566)
Q Consensus 484 qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~ 562 (566)
|||+|||||+.+|++|||||||+|||+.+++.+.++|++++++ |.|||++|||++++..+||++++|++|+++++|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999999764 899999999999999999999999999999999887
Q ss_pred cc
Q psy7366 563 HL 564 (566)
Q Consensus 563 ~l 564 (566)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 65
No 180
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-46 Score=376.61 Aligned_cols=221 Identities=28% Similarity=0.398 Sum_probs=195.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
++++++|+++.|+. ..+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++
T Consensus 6 ~~l~i~~l~~~~~~--~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (269)
T PRK13648 6 SIIVFKNVSFQYQS--DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRK 83 (269)
T ss_pred ceEEEEEEEEEcCC--CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHh
Confidence 36999999999963 12459999999999999999999999999999999999999999999999998754 3345667
Q ss_pred ceEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 420 YIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 420 ~i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
+++|+||++. +++..|+.+|+.+.............+.+.++++.+++.+..++++.+||+|||||++|||||+.+|++
T Consensus 84 ~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~l 163 (269)
T PRK13648 84 HIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNPSV 163 (269)
T ss_pred heeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 8999999985 677789999998765433333444455678899999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.++..++++|+++.++ |.|||++||+++++.. |||+++|++|++++.|+++++
T Consensus 164 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 164 IILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999998765 8999999999999986 999999999999999988765
No 181
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.8e-46 Score=366.09 Aligned_cols=210 Identities=35% Similarity=0.525 Sum_probs=188.8
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
|+++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... .++.++
T Consensus 1 l~l~~v~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFG----KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---DLHKIG 73 (223)
T ss_pred CEEEeEEEEEC----CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---ccccEE
Confidence 46899999996 45799999999999999999999999999999999999999999999999876431 124799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+.+.....+.. ...+.++++.+++.+..++++.+|||||+||++||||++.+|++||||
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~llllD 149 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLP----DSRIDEVLNIVDLTNTGKKKAKQFSLGMKQRLGIAIALLNHPKLLILD 149 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEEC
Confidence 9999998888899999998765443322 245778999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATH 563 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 563 (566)
|||+|||+.+++.++++|++++++|.|||++|||++++..+|||+++|++|++++.|++.+
T Consensus 150 EP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 150 EPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999997778999999999999999999999999999999988653
No 182
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-46 Score=373.77 Aligned_cols=219 Identities=21% Similarity=0.321 Sum_probs=191.1
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~-- 412 (566)
...|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|+++|+++..
T Consensus 17 ~~~l~~~nl~~~~~----~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 17 EIKMRARDVSVFYG----EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CceEEEEeEEEEEC----CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 34799999999996 45799999999999999999999999999999999999975 89999999998753
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC--CchHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV--PSVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRK 485 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqr 485 (566)
....+++.++|+||++.+++. |+.||+.+....++. +.......+.++++.+++.+ ..++++.+||||||||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qr 171 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQR 171 (267)
T ss_pred cchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHH
Confidence 223456789999999988875 999999876543332 22233456788999999953 4678899999999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 486 LSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 486 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++|||||+.+|++|||||||+|||+.++..+.++|+++.+ +.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 172 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14235 172 LCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKM 249 (267)
T ss_pred HHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999865 68999999999999999999999999999999987764
No 183
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.7e-46 Score=368.69 Aligned_cols=218 Identities=26% Similarity=0.433 Sum_probs=194.6
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ ++.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++.++
T Consensus 1 i~i~~l~~~~~----~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~-~~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFG----SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVH-ARDRKIG 75 (237)
T ss_pred CEEEEEEEEEC----CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCC-hhhcCEE
Confidence 46899999997 457999999999999999999999999999999999999999999999998875422 2356899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+|+.+|+.||+.+.....+.......+.+.++++.+++.+..++.+.+||+||+||++|||||+.+|+++|||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQVLLLD 155 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999999998999999987654433333334456789999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+|||+.++..++++|.++.++ |+|||++||+++++.++||++++|++|++++.|+.+++.
T Consensus 156 EP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 219 (237)
T TIGR00968 156 EPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVY 219 (237)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999998776 899999999999999999999999999999999887653
No 184
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-46 Score=370.68 Aligned_cols=217 Identities=20% Similarity=0.323 Sum_probs=190.1
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC---CCccEEEEcCccCCC-chHHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK---PTSGNAYVMNHSIRD-SMDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~---~~~G~i~~~g~~~~~-~~~~~ 417 (566)
+++++|+++.|+ ++.+|+|+||+|.+||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .....
T Consensus 2 ~~~~~~l~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~ 77 (246)
T PRK14269 2 IAKTTNLNLFYG----KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVAL 77 (246)
T ss_pred ceeeeeeEEEEC----CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHH
Confidence 478999999996 4679999999999999999999999999999999999974 689999999998864 23445
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCC--CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHHHHH
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNV--PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~la~a 491 (566)
++.++|+||++.+|+ .|++||+.+.....+. .......++.++++.+++. +..++++.+|||||||||+||||
T Consensus 78 ~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~lara 156 (246)
T PRK14269 78 RKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARA 156 (246)
T ss_pred hhhEEEEecCCcccc-ccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHH
Confidence 678999999998887 6999999876443332 1223445678899999995 34678899999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+.+|++|||||||+|||+.++..+.+.|.++.+ |+|||++||+++++..+||++++|++|++++.|+++++
T Consensus 157 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 228 (246)
T PRK14269 157 LAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEF 228 (246)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999864 89999999999999999999999999999999987764
No 185
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-46 Score=363.33 Aligned_cols=204 Identities=29% Similarity=0.428 Sum_probs=181.1
Q ss_pred eeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-----chHHhcCce
Q psy7366 347 RLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-----SMDLVRSYI 421 (566)
Q Consensus 347 ~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-----~~~~~~~~i 421 (566)
+|+|+|+ ++.+ |+||+|++ |+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 5 ~l~~~~~----~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 5 DIEKRLP----DFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred eeeEecC----Ceee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcE
Confidence 8999997 3444 99999999 9999999999999999999999999999999999988742 122346689
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|+||++.+++.+|+.+|+.+..... ........+.++++.+++.+..++++.+||||||||++|||||+.+|++|||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llll 155 (214)
T cd03297 78 GLVFQQYALFPHLNVRENLAFGLKRK--RNREDRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPELLLL 155 (214)
T ss_pred EEEecCCccCCCCCHHHHHHHHHhhC--CHHHHHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999998999999998764322 2223445688899999998888999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
||||+|||+.+++.+.++|++++++ |.|||++|||++++..+||++++|++|++++.|
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 156 DEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999776 899999999999999999999999999998765
No 186
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-46 Score=389.63 Aligned_cols=210 Identities=21% Similarity=0.366 Sum_probs=188.1
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-----hHH
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-----MDL 416 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-----~~~ 416 (566)
+|++ |+++.|+ ++ .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ...
T Consensus 1 ~l~~-~l~k~~~----~~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~ 73 (352)
T PRK11144 1 MLEL-NFKQQLG----DL-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPP 73 (352)
T ss_pred CeEE-EEEEEeC----CE-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccch
Confidence 3667 9999996 33 23 89999999999999999999999999999999999999999999887431 223
Q ss_pred hcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 417 VRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 417 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
.+++++|+||++.+|+.+|+.||+.+... ....+++.++++.+++.+..++++.+|||||||||+|||||+.+|
T Consensus 74 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p 147 (352)
T PRK11144 74 EKRRIGYVFQDARLFPHYKVRGNLRYGMA------KSMVAQFDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAP 147 (352)
T ss_pred hhCCEEEEcCCcccCCCCcHHHHHHhhhh------hhhHHHHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999987532 122456789999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++|||||||+|||+.++..+++.|+++.++ |.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 148 ~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i 216 (352)
T PRK11144 148 ELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEV 216 (352)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 999999999999999999999999999776 89999999999999999999999999999999998775
No 187
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-46 Score=376.03 Aligned_cols=221 Identities=24% Similarity=0.366 Sum_probs=194.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+|+++|+++.|+.. ....+|+|+||+|.+||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. .....+++
T Consensus 4 ~l~~~~l~~~~~~~-~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 82 (277)
T PRK13642 4 ILEVENLVFKYEKE-SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRK 82 (277)
T ss_pred eEEEEEEEEEcCCC-CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcc
Confidence 68999999999631 12459999999999999999999999999999999999999999999999998754 23445678
Q ss_pred eEEEecCCC-CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 421 IGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 421 i~~v~q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
++|+||++. +++..|+.||+.+.....+.......+++.++++.+++.+..++++.+||||||||++|||||+.+|++|
T Consensus 83 i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~lAraL~~~p~ll 162 (277)
T PRK13642 83 IGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREPARLSGGQKQRVAVAGIIALRPEII 162 (277)
T ss_pred eEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999974 5667899999987544333333344566889999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.++..++++|++++++ |.|||++|||++++. .||++++|++|++++.|+++++
T Consensus 163 llDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~ 227 (277)
T PRK13642 163 ILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEIIKEAAPSEL 227 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999876 999999999999997 5999999999999999998765
No 188
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-46 Score=372.74 Aligned_cols=218 Identities=21% Similarity=0.324 Sum_probs=190.9
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~--- 412 (566)
.+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 12 ~~l~~~~l~~~~~----~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 12 SKIQVRNLNFYYG----KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred ceEEEEEEEEEeC----CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 4699999999996 4579999999999999999999999999999999999986 589999999998742
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
....++++++|+||++.+++ .|+++|+.+..... +.+.....+++.++++.+++. +..++++.+||||||||++
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 166 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLC 166 (260)
T ss_pred chHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHH
Confidence 23345678999999998887 79999998764432 233334446688899999974 4568899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.+++.+.+.|+++++ +.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 167 laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 167 IARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ-DYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999854 78999999999999999999999999999999987765
No 189
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-46 Score=366.44 Aligned_cols=216 Identities=30% Similarity=0.467 Sum_probs=192.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
|.++|+++.|+ + ++|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|+++|.++..... .++.++
T Consensus 1 l~~~~l~~~~~----~-~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~-~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWK----E-FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP-EKRDIS 74 (235)
T ss_pred CeeEeEEEEeC----C-ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh-hHcCEE
Confidence 46889999996 3 38999999999999999999999999999999999999999999999998754222 256899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+|||||+||++|||||+.+|+++|||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 154 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKILLLD 154 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEEC
Confidence 99999999988999999987654433333444556788999999998899999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||+|||+.+++.++++|+++..+ |.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 155 EPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 217 (235)
T cd03299 155 EPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEV 217 (235)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999998765 99999999999999999999999999999999987654
No 190
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-45 Score=370.89 Aligned_cols=218 Identities=21% Similarity=0.302 Sum_probs=191.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~---~ 413 (566)
.++++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .
T Consensus 4 ~l~i~~v~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~ 79 (258)
T PRK14241 4 RIDVKDLNIYYG----SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVD 79 (258)
T ss_pred cEEEeeEEEEEC----CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccC
Confidence 589999999996 45799999999999999999999999999999999999974 69999999988742 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|++|++.+++.+|+.||+.+.....+. ......+.+.++++.+++. +..++++.+|||||||||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 159 (258)
T PRK14241 80 PVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCI 159 (258)
T ss_pred hHHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 334567899999999999999999999876543332 2333455678889999884 46688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE------CCEEEEecCcc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV------NGQFTCLGSAT 562 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~------~G~i~~~g~~~ 562 (566)
||||+.+|++|||||||+|||+.++..+.++|+++++ ++|||++|||++++..+|||+++|+ +|++++.|+++
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~~~ 238 (258)
T PRK14241 160 ARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDDTE 238 (258)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCCHH
Confidence 9999999999999999999999999999999999864 6899999999999999999999997 79999999887
Q ss_pred cc
Q psy7366 563 HL 564 (566)
Q Consensus 563 ~l 564 (566)
++
T Consensus 239 ~~ 240 (258)
T PRK14241 239 KI 240 (258)
T ss_pred HH
Confidence 65
No 191
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.6e-46 Score=388.38 Aligned_cols=210 Identities=23% Similarity=0.403 Sum_probs=187.4
Q ss_pred eeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-----hHHhcCce
Q psy7366 347 RLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-----MDLVRSYI 421 (566)
Q Consensus 347 ~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-----~~~~~~~i 421 (566)
|+++.|+ ++. + ++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ....++.+
T Consensus 4 ~l~~~~~----~~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i 77 (354)
T TIGR02142 4 RFSKRLG----DFS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRI 77 (354)
T ss_pred EEEEEEC----CEE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCe
Confidence 7899996 333 5 99999999999999999999999999999999999999999999987431 12346789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|+||++.+|+.+|+.||+.+..... ......+++.++++.+++.+..++++.+|||||||||+|||||+.+|++|||
T Consensus 78 ~~v~q~~~l~~~~tv~enl~~~~~~~--~~~~~~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lllL 155 (354)
T TIGR02142 78 GYVFQEARLFPHLSVRGNLRYGMKRA--RPSERRISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLM 155 (354)
T ss_pred EEEecCCccCCCCcHHHHHHHHhhcc--ChhHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999998764322 2223345688999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+|||+.+++.+++.|++++++ |.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 156 DEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (354)
T TIGR02142 156 DEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEV 219 (354)
T ss_pred cCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 9999999999999999999999876 89999999999999999999999999999999988765
No 192
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.2e-45 Score=370.37 Aligned_cols=219 Identities=24% Similarity=0.396 Sum_probs=190.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCcc-----CCCc-hH
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHS-----IRDS-MD 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~-----~~~~-~~ 415 (566)
+++++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|++ +... ..
T Consensus 6 ~l~~~~l~~~~~----~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~ 81 (258)
T PRK11701 6 LLSVRGLTKLYG----PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEA 81 (258)
T ss_pred eEEEeeeEEEcC----CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHH
Confidence 699999999996 4579999999999999999999999999999999999999999999999987 6431 21
Q ss_pred H----hcCceEEEecCCC--CCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHH
Q psy7366 416 L----VRSYIGYCPQFDA--LNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 416 ~----~~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~ 487 (566)
. .++.++|+||++. +++.+|+.+|+.+....... ........+.++++.+++. ...++++.+||||||||++
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~ 161 (258)
T PRK11701 82 ERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQ 161 (258)
T ss_pred HHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHH
Confidence 1 3567999999973 67778999998764322221 2223455678899999997 4778999999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..+++.|++++++ |.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 162 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 239 (258)
T PRK11701 162 IARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQV 239 (258)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998765 89999999999999999999999999999999988765
No 193
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-46 Score=373.66 Aligned_cols=219 Identities=21% Similarity=0.297 Sum_probs=191.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC--------ccEEEEcCccCCC-
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT--------SGNAYVMNHSIRD- 412 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~--------~G~i~~~g~~~~~- 412 (566)
+|+++|+++.|+ ++.+|+++||+|++|++++|+||||||||||+|+|+|+++|+ +|+|.++|.++..
T Consensus 1 ml~~~nl~~~~~----~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~ 76 (272)
T PRK13547 1 MLTADHLHVARR----HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAI 76 (272)
T ss_pred CeEEEEEEEEEC----CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccC
Confidence 478999999996 467999999999999999999999999999999999999998 9999999998754
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhc----CCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVR----NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~l 488 (566)
.....++.++|+||++.+++.+|+.||+.+..... ........+.+.++++.+++.+..++++.+|||||+|||+|
T Consensus 77 ~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 77 DAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred CHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHH
Confidence 33344567999999987666689999997743111 11112334567889999999988899999999999999999
Q ss_pred HHHHc---------CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEe
Q psy7366 489 AIALL---------GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCL 558 (566)
Q Consensus 489 a~al~---------~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~ 558 (566)
||||+ .+|++|||||||+|||+.++..+.++|+++.++ |.|||++|||++++..+||++++|++|++++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 599999999999999999999999999998776 89999999999999999999999999999999
Q ss_pred cCcccc
Q psy7366 559 GSATHL 564 (566)
Q Consensus 559 g~~~~l 564 (566)
|+++++
T Consensus 237 g~~~~~ 242 (272)
T PRK13547 237 GAPADV 242 (272)
T ss_pred cCHHHH
Confidence 987765
No 194
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-45 Score=368.20 Aligned_cols=219 Identities=20% Similarity=0.305 Sum_probs=191.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--C---CccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK--P---TSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--~---~~G~i~~~g~~~~~--- 412 (566)
..++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++..
T Consensus 3 ~~l~~~nl~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 3 NKVKLEQLNVHFG----KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred cEEEEEEEEEEeC----CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 3589999999996 4579999999999999999999999999999999999986 4 68999999998753
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqrv~ 487 (566)
.....++.++|+||++.+++.+|+.||+.+.....+. ......+.+.++++.+++.. ..++.+.+||||||||++
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~ 158 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLC 158 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHH
Confidence 1234577899999999999989999999875443322 22333456788899999853 457889999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..+.+.|+++.+ +.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 159 laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 159 IARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999975 58999999999999999999999999999999988765
No 195
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-45 Score=370.17 Aligned_cols=219 Identities=23% Similarity=0.361 Sum_probs=190.6
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--C---CccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK--P---TSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--~---~~G~i~~~g~~~~~-- 412 (566)
..+++++|+++.|+ .+.+|+++||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++..
T Consensus 10 ~~~l~i~~l~~~~~----~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~ 85 (259)
T PRK14274 10 QEVYQINGMNLWYG----QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGK 85 (259)
T ss_pred CceEEEeeEEEEEC----CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccc
Confidence 34799999999996 4579999999999999999999999999999999999997 3 58999999998742
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKL 486 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv 486 (566)
.....++.++|+||++.+++. |++||+.+.....+. .......++.++++.+++. +..++++.+||||||||+
T Consensus 86 ~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 86 VDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRL 164 (259)
T ss_pred cCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHH
Confidence 223456789999999988875 999999876443332 2233345677889999885 346889999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||+|+.+|++|||||||+|||+.++..++++|+++.+ +.|||++|||++++..+|||+++|++|+++++|+++++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999865 78999999999999999999999999999999998765
No 196
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-45 Score=367.42 Aligned_cols=218 Identities=21% Similarity=0.317 Sum_probs=189.5
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCC---CCC--CccEEEEcCccCCCc--
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGA---IKP--TSGNAYVMNHSIRDS-- 413 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~---~~~--~~G~i~~~g~~~~~~-- 413 (566)
.+++++|+++.|+ .+.+|+|+||+|++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++...
T Consensus 2 ~~l~~~~~~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 77 (250)
T PRK14245 2 VKIDARDVNFWYG----DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGV 77 (250)
T ss_pred cEEEEEEEEEEEC----CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccc
Confidence 4689999999996 46799999999999999999999999999999999997 455 589999999987531
Q ss_pred -hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHHHH
Q psy7366 414 -MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 414 -~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqrv~ 487 (566)
....++.++|+||++.+++ .|+.||+.+.....+.. .....+.+.++++.+++.+ ..++++.+||||||||++
T Consensus 78 ~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 156 (250)
T PRK14245 78 QVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLC 156 (250)
T ss_pred cHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHH
Confidence 2345678999999998887 59999998765433322 2234456788999999853 468899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..+.+.|+++. +++|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 157 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 157 IARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999985 479999999999999999999999999999999988765
No 197
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-45 Score=367.56 Aligned_cols=218 Identities=22% Similarity=0.312 Sum_probs=190.6
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~--- 412 (566)
.+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++..
T Consensus 3 ~~l~~~~l~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 78 (251)
T PRK14270 3 IKMESKNLNLWYG----EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDV 78 (251)
T ss_pred cEEEEEEeEEEEC----CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccc
Confidence 3689999999996 45799999999999999999999999999999999999875 79999999998753
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
.....++.++|+||++.+++ +|+.||+.+.....+. .......++.++++.+++. +..++++.+||+|||||++
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 157 (251)
T PRK14270 79 DVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLC 157 (251)
T ss_pred cHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHH
Confidence 12345678999999998887 8999999876544333 2223345677889999874 3568899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..++++|+++.+ +.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 158 laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 158 IARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 99999999999999999999999999999999999876 58999999999999999999999999999999988765
No 198
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=9e-46 Score=405.23 Aligned_cols=219 Identities=25% Similarity=0.339 Sum_probs=195.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~~ 419 (566)
+++++|+++.|+ ++++|+|+||+|.+||++||+||||||||||+|+|+|+++|++|+|.++|.++... ....++
T Consensus 4 ~i~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 79 (501)
T PRK10762 4 LLQLKGIDKAFP----GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEA 79 (501)
T ss_pred eEEEeeeEEEeC----CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhC
Confidence 689999999996 46799999999999999999999999999999999999999999999999987532 222356
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhc---C-CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVR---N-VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~---~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
+++|+||++.+++.+|+.||+.++.... . .+....++++.++++.+++.+..++++.+|||||||||+|||||+.+
T Consensus 80 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~ 159 (501)
T PRK10762 80 GIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVLSFE 159 (501)
T ss_pred CEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHhcC
Confidence 7999999999999999999998754321 1 12233345688999999999888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||||+|||+.++..++++|++++++|.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 160 p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 160 SKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred CCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 999999999999999999999999999987799999999999999999999999999999999988765
No 199
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-45 Score=370.97 Aligned_cols=219 Identities=25% Similarity=0.349 Sum_probs=189.0
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~-- 412 (566)
..+++++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 19 ~~~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~ 94 (268)
T PRK14248 19 EHILEVKDLSIYYG----EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSN 94 (268)
T ss_pred CceEEEEEEEEEeC----CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccc
Confidence 35799999999996 4679999999999999999999999999999999999864 789999999998753
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKL 486 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv 486 (566)
.....+++++|+||++.+++. |+.||+.+........ .......+.++++.+++. +..++++.+||||||||+
T Consensus 95 ~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 95 INVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred ccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHH
Confidence 123456789999999988875 9999998764332221 122345567788888874 356889999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|++|||||||+|||+.++..+.++|+++++ +.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999865 68999999999999999999999999999999987764
No 200
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-45 Score=371.31 Aligned_cols=218 Identities=21% Similarity=0.313 Sum_probs=188.7
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~-- 412 (566)
..+|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 11 ~~~l~i~nl~~~~~----~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 11 NIIISLQNVTISYG----TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CceEEEEeEEEEEC----CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34799999999996 4679999999999999999999999999999999999987 689999999988742
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
.....+++++|+||++.+++. |+.||+.+.....+... ...+.+.++++.+++. +..++++.+||||||||++
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~ 164 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPK-SIYENIAFGARINGYTG-DMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLC 164 (269)
T ss_pred CCHHHHhhceEEEccCCccchh-hHHHHHhhhhhhcCCcH-HHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHH
Confidence 234456789999999988874 99999987654333322 2345567788888763 4578899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEEC-----------CEEE
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVN-----------GQFT 556 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~-----------G~i~ 556 (566)
|||||+.+|++|||||||+|||+.++..++++|+++++ +.|||++|||++++..+||++++|++ |+++
T Consensus 165 laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~ 243 (269)
T PRK14259 165 IARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLV 243 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEE
Confidence 99999999999999999999999999999999999854 78999999999999999999999996 6789
Q ss_pred EecCcccc
Q psy7366 557 CLGSATHL 564 (566)
Q Consensus 557 ~~g~~~~l 564 (566)
+.|+++++
T Consensus 244 ~~~~~~~~ 251 (269)
T PRK14259 244 EFNETKKI 251 (269)
T ss_pred EeCCHHHH
Confidence 99988765
No 201
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-45 Score=366.20 Aligned_cols=217 Identities=24% Similarity=0.373 Sum_probs=189.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~---~ 413 (566)
.|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .
T Consensus 3 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 3 KISVKDLDLFYG----DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred eEEEEEEEEEEC----CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 488999999996 45799999999999999999999999999999999999763 69999999998753 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|+||++.+++ +|+.||+.+.....+.. .....+.+.++++.+++. +..++++.+||||||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 157 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCI 157 (250)
T ss_pred hHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHH
Confidence 2345678999999998887 89999998765433322 223456678888888874 35688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..+.++|+++.+ +.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 158 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 158 ARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999854 79999999999999999999999999999999987764
No 202
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-45 Score=366.46 Aligned_cols=218 Identities=22% Similarity=0.331 Sum_probs=188.8
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC--CC---CccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI--KP---TSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~--~~---~~G~i~~~g~~~~~--- 412 (566)
.+++++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+. +| ++|+|.++|+++..
T Consensus 4 ~~l~~~~l~~~~~----~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~ 79 (252)
T PRK14239 4 PILQVSDLSVYYN----KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRT 79 (252)
T ss_pred ceEEEEeeEEEEC----CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCccc
Confidence 3689999999996 457999999999999999999999999999999999985 36 59999999998743
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
....+++.++|+||++.+++ +|+.||+.+.....+.. .......+.++++.+++. +..++++.+|||||||||+
T Consensus 80 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 158 (252)
T PRK14239 80 DTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVC 158 (252)
T ss_pred chHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHH
Confidence 12345678999999998887 79999998765433332 222345677889998874 3468899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..++++|+++.+ +.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 159 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 159 IARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999865 68999999999999999999999999999999987765
No 203
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-45 Score=403.62 Aligned_cols=220 Identities=24% Similarity=0.318 Sum_probs=196.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--CccEEEEcCccCCCc-h-HH
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP--TSGNAYVMNHSIRDS-M-DL 416 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~-~-~~ 416 (566)
.+|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+|+|+|+++| ++|+|.++|.++... . ..
T Consensus 4 ~~l~~~nl~~~~~----~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~ 79 (506)
T PRK13549 4 YLLEMKNITKTFG----GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDT 79 (506)
T ss_pred ceEEEeeeEEEeC----CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 3699999999996 46799999999999999999999999999999999999996 899999999988542 2 23
Q ss_pred hcCceEEEecCCCCCCCCCHHHHHHHHHHhc--C-CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHc
Q psy7366 417 VRSYIGYCPQFDALNDRLTPREHLEFYSRVR--N-VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 417 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~--~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
.++.++|+||++.+++.+|+.||+.+..... + .+.....+++.++++.+++.+..++++.+|||||||||+|||||+
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~ 159 (506)
T PRK13549 80 ERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKALN 159 (506)
T ss_pred HHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHHHh
Confidence 4577999999998999999999998764322 1 222334556889999999988889999999999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.+|++|||||||+|||+.++..++++|.+++++|.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 160 KQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 99999999999999999999999999999987799999999999999999999999999999999988765
No 204
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.6e-45 Score=360.89 Aligned_cols=216 Identities=28% Similarity=0.407 Sum_probs=187.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC---CCccEEEEcCccCCCchHHhc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK---PTSGNAYVMNHSIRDSMDLVR 418 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~---~~~G~i~~~g~~~~~~~~~~~ 418 (566)
.+.++|+++.|++.++.+++|+|+||+|++||+++|+||||||||||+|+|+|+++ |++|+|.++|+++.. ...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~--~~~~ 80 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKP--DQFQ 80 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECCh--HHhc
Confidence 46789999999743223679999999999999999999999999999999999999 999999999988742 3456
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcC---CCchHHHHHHHH-HHHHcCCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRN---VPSVLLNTIVNE-SLNKFALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~-~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
++++|+||++.+++.+|+.||+.+...... .........+.+ .++.+++.+..++.+.+|||||+||++|||||+.
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 789999999999999999999987644321 111122233445 8999999888889999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCH-HHHHhhCCEEEEEECCEEEEec
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNM-EECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~-~~~~~~~drv~~l~~G~i~~~g 559 (566)
+|++|||||||+|||+.++..+.++|+++.++|.|+|++||++ +++..+||++++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999999999999999999999877789999999998 6899999999999999998765
No 205
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-45 Score=365.37 Aligned_cols=218 Identities=22% Similarity=0.320 Sum_probs=188.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-----ccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT-----SGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~-----~G~i~~~g~~~~~---~ 413 (566)
+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+|+|+|+++|+ +|+|.++|+++.. .
T Consensus 4 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (252)
T PRK14272 4 LLSAQDVNIYYG----DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVD 79 (252)
T ss_pred EEEEeeeEEEEC----CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccC
Confidence 688999999996 467999999999999999999999999999999999999874 8999999988753 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|+||++.+++.+|+.||+.+.....+.. .....+.+.++++.+++. +..++++.+||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 159 (252)
T PRK14272 80 PVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCI 159 (252)
T ss_pred HHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHH
Confidence 2345678999999999999899999998754433222 222345566677777653 45688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..+.+.|+++++ +.|||++||+++++..+|||+++|++|++++.|+++++
T Consensus 160 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 160 ARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999864 79999999999999999999999999999999988765
No 206
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-45 Score=403.52 Aligned_cols=220 Identities=27% Similarity=0.357 Sum_probs=195.4
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hH-Hhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MD-LVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~-~~~ 418 (566)
.+++++|+++.|+ ++.+|+|+||+|++||++||+||||||||||+|+|+|+++|++|+|.++|+++... .. ..+
T Consensus 4 ~~l~~~~l~~~~~----~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 79 (510)
T PRK09700 4 PYISMAGIGKSFG----PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQ 79 (510)
T ss_pred ceEEEeeeEEEcC----CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHH
Confidence 3699999999996 46799999999999999999999999999999999999999999999999988542 22 234
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHH----hcCC---CchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSR----VRNV---PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~----~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 491 (566)
++++|+||++.+++.+|+.||+.+... ..+. +.....+++.++++.+++.+..++++.+|||||||||+||||
T Consensus 80 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia~a 159 (510)
T PRK09700 80 LGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKT 159 (510)
T ss_pred CCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 679999999999999999999976432 1111 122345678899999999988899999999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+.+|++|||||||+|||+.++..++++|++++++|+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 232 (510)
T PRK09700 160 LMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDV 232 (510)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhC
Confidence 9999999999999999999999999999999987899999999999999999999999999999999988765
No 207
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-46 Score=342.95 Aligned_cols=220 Identities=23% Similarity=0.348 Sum_probs=197.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+|+++|++++.. ++.+++++||++++||+++|+||||||||||||.|+|.+.|++|++.++|.++.. ....+.++
T Consensus 1 mi~a~nls~~~~----Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~ 76 (259)
T COG4559 1 MIRAENLSYSLA----GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARH 76 (259)
T ss_pred CeeeeeeEEEee----cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHH
Confidence 478899999886 6789999999999999999999999999999999999999999999999999866 34555677
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCC--chHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcC----
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVP--SVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLG---- 494 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~---- 494 (566)
-+.+||+..+-..+||.|.+.++..-++.. ..+..+.+.++|...++..+..+...+|||||||||.+||.|++
T Consensus 77 raVlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y~~LSGGEqQRVqlARvLaQl~~~ 156 (259)
T COG4559 77 RAVLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDYRTLSGGEQQRVQLARVLAQLWPP 156 (259)
T ss_pred hhhcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccchhhcCchHHHHHHHHHHHHHccCC
Confidence 899999988766679999999876544322 23556678999999999999999999999999999999999975
Q ss_pred --CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 495 --NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 495 --~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++++|+||||||+||+..+..++++.++++++|..|+.|-||++.+..||||+++|++|++++.|+|+++.
T Consensus 157 v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~vl 229 (259)
T COG4559 157 VPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDVL 229 (259)
T ss_pred CCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHhc
Confidence 34599999999999999999999999999999999999999999999999999999999999999998764
No 208
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-45 Score=371.50 Aligned_cols=219 Identities=23% Similarity=0.322 Sum_probs=189.5
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~-- 412 (566)
..+|+++|+++.|+ ++.+|+|+||+|.+||+++|+||||||||||+++|+|+.+ |++|+|.++|+++..
T Consensus 37 ~~~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~ 112 (286)
T PRK14275 37 KPHVVAKNFSIYYG----EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKF 112 (286)
T ss_pred ceEEEEeeeEEEEC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcc
Confidence 34799999999996 4569999999999999999999999999999999999864 499999999988743
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKL 486 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv 486 (566)
....++++++|+||++.+++. |+.||+.+.....+.. .....+.+.++++.+++. +..++++.+|||||||||
T Consensus 113 ~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv 191 (286)
T PRK14275 113 TDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRL 191 (286)
T ss_pred cchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHH
Confidence 122456789999999988875 9999998765433332 223345677888888873 456889999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|++|||||||+|||+.+++.+.+.|+++++ +.|||++|||++++..+|||+++|++|+++..|+++++
T Consensus 192 ~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 192 CVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999865 68999999999999999999999999999999987665
No 209
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-45 Score=364.86 Aligned_cols=217 Identities=22% Similarity=0.354 Sum_probs=189.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~---~ 413 (566)
+++++|+++.|+ .+++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 4 ~l~~~~l~~~~~----~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~ 79 (251)
T PRK14251 4 IISAKDVHLSYG----NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMD 79 (251)
T ss_pred eEEEEeeEEEEC----CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccch
Confidence 689999999996 4679999999999999999999999999999999999997 479999999998743 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPS-VLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|++|++.+++ .|++||+.+.....+... ....+.+.++++.+++. ...++++.+||||||||++|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~l 158 (251)
T PRK14251 80 LVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICI 158 (251)
T ss_pred HHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHH
Confidence 2345678999999998886 799999987654333322 22345677889999984 34688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.+++.+.+.|+++.+ +.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 159 ARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999854 68999999999999999999999999999999987764
No 210
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-45 Score=364.01 Aligned_cols=217 Identities=25% Similarity=0.395 Sum_probs=189.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCCc---
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRDS--- 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~~--- 413 (566)
+|+++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...
T Consensus 3 ~l~~~~l~~~~~----~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~ 78 (250)
T PRK14262 3 IIEIENFSAYYG----EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLD 78 (250)
T ss_pred eEEEEeeEEEeC----CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhh
Confidence 689999999996 45799999999999999999999999999999999999984 899999999887531
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|+||++.+++ .|++||+.+.....+.. .....+.+.++++.+++.. ..++++.+||||||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~l 157 (250)
T PRK14262 79 VTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCI 157 (250)
T ss_pred HHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHH
Confidence 2345678999999998887 89999998765433322 2233455778899988853 4688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..+.++|+++.+ +.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 158 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 158 ARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999865 78999999999999999999999999999999988765
No 211
>KOG0066|consensus
Probab=100.00 E-value=1.8e-46 Score=376.84 Aligned_cols=378 Identities=25% Similarity=0.353 Sum_probs=273.2
Q ss_pred hcCCChhhHHHHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHH
Q psy7366 59 VRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAV 137 (566)
Q Consensus 59 ~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~ 137 (566)
.+.+.....+.+++++|..+|+. +..+++...+|||+|-||+|||||...|-+|.|||||||||..++-||-+.|..++
T Consensus 380 LraiGA~sAEarARRILAGLGFskEMQ~rPt~kFSGGWRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgWk 459 (807)
T KOG0066|consen 380 LRAIGADSAEARARRILAGLGFSKEMQERPTTKFSGGWRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWK 459 (807)
T ss_pred HHHhccccchhHHHHHHhhcCCChhHhcCCccccCCceeeehhHHHHHhcCceeeeecCCccccccceeeehhhHHhhhh
Confidence 33344445677899999999997 46799999999999999999999999999999999999999999999999998875
Q ss_pred hCCCEEEEecCChhHHHhhcCEEEEEeCCEEE-EecChhHHHhhccCcccc--CCCCCCCCccchhH-------------
Q psy7366 138 SEGRCVILTSHNMEECEALCTKLTIMVNGQFT-CLGSATHLKSKSMALPVS--GNDLGRGDPVRSEL------------- 201 (566)
Q Consensus 138 ~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~-~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~------------- 201 (566)
+ |++|+|||-.|++.+|+.|+-|++-++. +.|++.-++..... ... ..++..++....++
T Consensus 460 K---TLLIVSHDQgFLD~VCtdIIHLD~qkLhyYrGNY~~FKKmY~Q-k~~e~~K~yekQeK~LkelKa~GkS~KqAEkq 535 (807)
T KOG0066|consen 460 K---TLLIVSHDQGFLDSVCTDIIHLDNQKLHYYRGNYTLFKKMYAQ-KMQEHEKNYEKQEKQLKELKAEGKSAKQAEKQ 535 (807)
T ss_pred h---eeEEEecccchHHHHHHHHhhhhhhhhhhhcchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCcchHHHHHH
Confidence 4 9999999999999999999999999985 45766555432110 000 00000000000000
Q ss_pred -HHhhccCC-CCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhch
Q psy7366 202 -SRALNDGS-GSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRII 279 (566)
Q Consensus 202 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (566)
.+.+.+.+ ..+.+++...+..
T Consensus 536 ~Ke~ltrKq~K~~~Knq~dded~--------------------------------------------------------- 558 (807)
T KOG0066|consen 536 VKEQLTRKQKKGGKKNQNDDEDA--------------------------------------------------------- 558 (807)
T ss_pred HHHHHHHHHHhccccccCccccc---------------------------------------------------------
Confidence 00000000 0000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHH---HH---HHhhhcC-CCCCCeEEEeeeEEEe
Q psy7366 280 GKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVR---KE---RERVEHG-ADSGDVLVVKRLFKIY 352 (566)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~-~~~~~~l~~~~l~~~y 352 (566)
..++.. ++ +..+..+ .-.+++|-+.++++.|
T Consensus 559 ------------------------------------------gapELL~RpKEY~VkF~FPep~~L~PPvLGlH~VtFgy 596 (807)
T KOG0066|consen 559 ------------------------------------------GAPELLQRPKEYSVKFQFPEPTKLNPPVLGLHDVTFGY 596 (807)
T ss_pred ------------------------------------------cCHHHHhCchheEEEEecCCCCCCCCCeeecccccccC
Confidence 000000 00 0000001 1123578899999999
Q ss_pred CCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCC--CC
Q psy7366 353 ANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFD--AL 430 (566)
Q Consensus 353 ~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~--~l 430 (566)
. +.++.+.+++|-|.--..++|+||||.||||||++|.|-+.|..|+..-+ .|-+||++.|.. .+
T Consensus 597 ~---gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn----------hrL~iG~FdQh~~E~L 663 (807)
T KOG0066|consen 597 P---GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN----------HRLRIGWFDQHANEAL 663 (807)
T ss_pred C---CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc----------ceeeeechhhhhHHhh
Confidence 6 47899999999999999999999999999999999999999999986433 245799999974 46
Q ss_pred CCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccc-cCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Q psy7366 431 NDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSD-REVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMD 509 (566)
Q Consensus 431 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD 509 (566)
....|..|++.- ...++- +.++..|..|||...++ -.+..||||||-||++|-.-+..|+||||||||++||
T Consensus 664 ~~Eetp~EyLqr---~FNlpy----q~ARK~LG~fGL~sHAHTikikdLSGGQKaRValaeLal~~PDvlILDEPTNNLD 736 (807)
T KOG0066|consen 664 NGEETPVEYLQR---KFNLPY----QEARKQLGTFGLASHAHTIKIKDLSGGQKARVALAELALGGPDVLILDEPTNNLD 736 (807)
T ss_pred ccccCHHHHHHH---hcCCCh----HHHHHHhhhhhhhhccceEeeeecCCcchHHHHHHHHhcCCCCEEEecCCCCCcc
Confidence 666788877643 234443 34678899999975443 4689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEE-ecCcc
Q psy7366 510 PGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTC-LGSAT 562 (566)
Q Consensus 510 ~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~-~g~~~ 562 (566)
+++...+.+.|+++ ...|||||||-..+.+-.-.++|+.+..|-+ +|+.+
T Consensus 737 IESIDALaEAIney---~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFe 787 (807)
T KOG0066|consen 737 IESIDALAEAINEY---NGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFE 787 (807)
T ss_pred hhhHHHHHHHHHhc---cCcEEEEecccceeeecCceEEEEccCChhhccccHH
Confidence 99999999999887 6789999999988877666788888776644 34444
No 212
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-45 Score=368.67 Aligned_cols=219 Identities=23% Similarity=0.357 Sum_probs=188.6
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~-- 412 (566)
.++++++|+++.|+ ++.+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 22 ~~~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 97 (271)
T PRK14238 22 KVVFDTQNLNLWYG----EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKS 97 (271)
T ss_pred ceEEEEeeeEEEEC----CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccc
Confidence 34799999999996 4569999999999999999999999999999999999997 699999999988742
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHcCC----CCccccCcCcCChhHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPS-VLLNTIVNESLNKFAL----GHYSDREVRTLSGGNKRKL 486 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~~l----~~~~~~~~~~LSgGqkqrv 486 (566)
....+++.++|+||++.+++ .|+.||+.+......... ......+.++++.+++ .+..++++.+||||||||+
T Consensus 98 ~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 98 YSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred ccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 23345678999999998887 499999987654333222 2223456677777753 4456889999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|++|||||||+|||+.++..+.++|+++.+ +.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999865 79999999999999999999999999999999988765
No 213
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.9e-45 Score=401.67 Aligned_cols=216 Identities=23% Similarity=0.348 Sum_probs=194.5
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hHH-hc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MDL-VR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~-~~ 418 (566)
++|+++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+|+|+|+++|++|+|.++|+++... ... .+
T Consensus 10 ~~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 85 (510)
T PRK15439 10 PLLCARSISKQYS----GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQ 85 (510)
T ss_pred ceEEEEeEEEEeC----CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHh
Confidence 3699999999996 46799999999999999999999999999999999999999999999999987542 222 34
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
..+||+||++.+++.+|+.||+.+.... ....++++.++++.+++.+..++++.+|||||||||+|||||+.+|++
T Consensus 86 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~----~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~l 161 (510)
T PRK15439 86 LGIYLVPQEPLLFPNLSVKENILFGLPK----RQASMQKMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRI 161 (510)
T ss_pred CCEEEEeccCccCCCCcHHHHhhccccc----chHHHHHHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 5799999999999999999999875321 123346688999999999888999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||||+|||+.++..++++|++++++|.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 162 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (510)
T PRK15439 162 LILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADL 227 (510)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHc
Confidence 999999999999999999999999987899999999999999999999999999999999988765
No 214
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-45 Score=336.68 Aligned_cols=215 Identities=25% Similarity=0.367 Sum_probs=196.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
++.+++++.+|... ...+|+|+|++|.+||.++++|||||||||||++++|+.+|+.|+|.++|++++.+.. .-
T Consensus 3 ~l~~~~~sl~y~g~--~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPga----er 76 (259)
T COG4525 3 MLNVSHLSLSYEGK--PRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGA----ER 76 (259)
T ss_pred eeehhheEEecCCc--chhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCc----cc
Confidence 46788999999732 2459999999999999999999999999999999999999999999999999876422 35
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
|.|||++.++|.+++.+|+.|+.++.++++....+++.+.+..+||.+.-++++.+|||||||||.|||||+.+|++|+|
T Consensus 77 gvVFQ~~~LlPWl~~~dNvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i~qLSGGmrQRvGiARALa~eP~~LlL 156 (259)
T COG4525 77 GVVFQNEALLPWLNVIDNVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYIWQLSGGMRQRVGIARALAVEPQLLLL 156 (259)
T ss_pred eeEeccCccchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccceEeecchHHHHHHHHHHhhcCcceEee
Confidence 89999999999999999999999999999888888999999999999988999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEE--CCEEEEecCcc
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMV--NGQFTCLGSAT 562 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~--~G~i~~~g~~~ 562 (566)
|||+++||.-+++.+.++|-++.+ .|+.+++||||++|+.-+++|+++|+ .|+|+..-+++
T Consensus 157 DEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 157 DEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred cCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCC
Confidence 999999999999999999988754 59999999999999999999999997 57888776554
No 215
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.3e-45 Score=357.79 Aligned_cols=212 Identities=23% Similarity=0.373 Sum_probs=185.9
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc----hHHhc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS----MDLVR 418 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~----~~~~~ 418 (566)
++++|+++.|+.+.+.+.+|+++||++++|++++|+||||||||||+++|+|+++|++|+|+++|.++... ....+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996322226799999999999999999999999999999999999999999999999987431 12356
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcC-CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRN-VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
+.++|+||++.+++.+|+.||+.+...... .........+.++++.+++.+..++++.+||+|||||++|||||+.+|+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral~~~p~ 161 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARALVHRPK 161 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 789999999999988999999987654332 2333445678899999999988899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
+|||||||+|||+.++..++++|+++.+ .++|||++|||++. ..+||++++|++|++
T Consensus 162 illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~-~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 162 LVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRI-LDVADRIVHMEDGKL 219 (220)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHH-HhhCCEEEEEECCEE
Confidence 9999999999999999999999999876 48999999999985 579999999999986
No 216
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=6.2e-45 Score=364.33 Aligned_cols=219 Identities=26% Similarity=0.410 Sum_probs=188.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCcc-----CCC-chH
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHS-----IRD-SMD 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~-----~~~-~~~ 415 (566)
+|+++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|++ +.. ...
T Consensus 3 ~l~~~~l~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (253)
T TIGR02323 3 LLQVSGLSKSYG----GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEA 78 (253)
T ss_pred eEEEeeeEEEeC----CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHH
Confidence 689999999996 4568999999999999999999999999999999999999999999999976 533 111
Q ss_pred ----HhcCceEEEecCCC--CCCCCCHHHHHHHHHHhcC-CCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHH
Q psy7366 416 ----LVRSYIGYCPQFDA--LNDRLTPREHLEFYSRVRN-VPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 416 ----~~~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~ 487 (566)
..++.++|++|++. +++.+|+.+|+.+...... .........+.++++.+++. ...++++.+|||||||||+
T Consensus 79 ~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~ 158 (253)
T TIGR02323 79 ERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQ 158 (253)
T ss_pred HHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHH
Confidence 13467999999974 4566789999865322111 11122345678999999997 4789999999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.+++.++++|+++.++ |.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 159 laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~~ 236 (253)
T TIGR02323 159 IARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQV 236 (253)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999998764 89999999999999999999999999999999987765
No 217
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-45 Score=365.96 Aligned_cols=219 Identities=23% Similarity=0.303 Sum_probs=190.9
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~-- 412 (566)
..+++++|+++.|+ ++++|+|+||+|.+||+++|+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 18 ~~~l~~~nl~~~~~----~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 93 (267)
T PRK14237 18 EIALSTKDLHVYYG----KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKE 93 (267)
T ss_pred CeEEEEeeEEEEEC----CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEccccc
Confidence 34799999999996 4679999999999999999999999999999999999996 589999999998743
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKL 486 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv 486 (566)
.....++.++|+||++.+++ .|+.||+.+.....+. ........+.++++.+++. +..++++.+|||||+||+
T Consensus 94 ~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl 172 (267)
T PRK14237 94 INVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRL 172 (267)
T ss_pred CChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHH
Confidence 12345678999999988887 5999999876443322 2223445678889999884 356889999999999999
Q ss_pred HHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 487 STAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 487 ~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||||+.+|++|||||||+|||+.++..+.++|+++.+ +.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 173 CIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK-NYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999854 79999999999999999999999999999999998765
No 218
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.8e-45 Score=355.46 Aligned_cols=201 Identities=24% Similarity=0.408 Sum_probs=177.7
Q ss_pred EeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC---c--hHHhcC
Q psy7366 345 VKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD---S--MDLVRS 419 (566)
Q Consensus 345 ~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~---~--~~~~~~ 419 (566)
++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. . ....++
T Consensus 1 i~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 76 (206)
T TIGR03608 1 LKNISKKFG----DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRRE 76 (206)
T ss_pred CcceEEEEC----CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHh
Confidence 468999996 4579999999999999999999999999999999999999999999999998642 1 123467
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
.++|++|++.+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++|
T Consensus 77 ~i~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lS~G~~qr~~laral~~~p~ll 156 (206)
T TIGR03608 77 KLGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDPPLI 156 (206)
T ss_pred CeeEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 89999999999998999999988654433334444567889999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEE
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM 550 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l 550 (566)
||||||+|||+.+++.+.+.|+++.++|.|||++||+++.+ .+||++++|
T Consensus 157 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 157 LADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred EEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 99999999999999999999999877799999999999976 579999875
No 219
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=7.2e-45 Score=363.92 Aligned_cols=215 Identities=23% Similarity=0.316 Sum_probs=187.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC----CccEEEEcCccCCCchHHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP----TSGNAYVMNHSIRDSMDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~----~~G~i~~~g~~~~~~~~~~ 417 (566)
.|+++|+++.|+ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. ....
T Consensus 4 ~l~~~~l~~~~~-----~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~-~~~~ 77 (254)
T PRK10418 4 QIELRNIALQAA-----QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAP-CALR 77 (254)
T ss_pred EEEEeCeEEEec-----cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccc-cccc
Confidence 689999999993 4699999999999999999999999999999999999999 99999999998753 1223
Q ss_pred cCceEEEecCCC--CCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC---ccccCcCcCChhHHHHHHHHHHH
Q psy7366 418 RSYIGYCPQFDA--LNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 418 ~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgGqkqrv~la~al 492 (566)
++.++|+||++. +.+.+|+.+|+.+.....+... ....+.++++.+++.+ ..++++.+|||||||||+|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral 155 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPA--DDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALAL 155 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCCh--HHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHH
Confidence 457999999974 4456799998866543333222 2356789999999976 56899999999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+.+|++|||||||+|||+.++..++++|+++.++ |.|||++||+++++..+|||+++|++|+++..|+++++
T Consensus 156 ~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 228 (254)
T PRK10418 156 LCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETL 228 (254)
T ss_pred hcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999998765 89999999999999999999999999999999988765
No 220
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-45 Score=362.89 Aligned_cols=217 Identities=19% Similarity=0.304 Sum_probs=188.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-----ccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT-----SGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~-----~G~i~~~g~~~~~---~ 413 (566)
+++++|+++.|+ ++.+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.++|+++.. .
T Consensus 4 ~l~~~~l~~~~~----~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 79 (251)
T PRK14249 4 KIKIRGVNFFYH----KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLD 79 (251)
T ss_pred eEEEEEEEEEEC----CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccC
Confidence 689999999996 457999999999999999999999999999999999999997 6999999988743 1
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|+||++.+++. |+.||+.+.....+.. .....+.+.++++.+++. +..++++.+|||||||||+|
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~l 158 (251)
T PRK14249 80 VVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCI 158 (251)
T ss_pred hHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 23456789999999988875 9999998765433322 222345567778888864 45688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..+.++|+++. ++.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 159 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 159 ARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 999999999999999999999999999999999984 589999999999999999999999999999999988765
No 221
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-45 Score=368.75 Aligned_cols=218 Identities=22% Similarity=0.357 Sum_probs=189.5
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~-- 412 (566)
..+|+++|+++.|+ ++.+|+|+||+|.+||+++|+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 37 ~~~l~i~~l~~~~~----~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~ 112 (285)
T PRK14254 37 ETVIEARDLNVFYG----DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDAD 112 (285)
T ss_pred CceEEEEEEEEEEC----CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccc
Confidence 34799999999996 4579999999999999999999999999999999999987 689999999988742
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
.....+++++|+||++.+++. |+.||+.+.....+.+. .....+.++++.+++. +..++++.+|||||||||+
T Consensus 113 ~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 113 VDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGYDG-DIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred cchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCCcH-HHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHH
Confidence 223456789999999988875 99999987654433332 3345678899999985 3568899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEE-EEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLT-IMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~-~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|+||||||||+|||+.+++.+.++|++++++ .|||++|||++++..+|||++ +|++|++++.|+++++
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~-~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEE-YTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999764 899999999999999999975 5799999999987654
No 222
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-45 Score=363.70 Aligned_cols=216 Identities=20% Similarity=0.336 Sum_probs=186.7
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCCc---h
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRDS---M 414 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~~---~ 414 (566)
-+++|+++.|+ ++++|+|+||+|.+||+++|+||||||||||+++|+|+.+ |++|+|.++|+++... .
T Consensus 6 ~~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 81 (251)
T PRK14244 6 ASVKNLNLWYG----SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNV 81 (251)
T ss_pred EEeeeEEEEEC----CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccch
Confidence 36889999996 4679999999999999999999999999999999999986 4799999999887431 2
Q ss_pred HHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC--chHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHHHHH
Q psy7366 415 DLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP--SVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 415 ~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqrv~l 488 (566)
...+++++|+||++.+++. |+.||+.+.....+.. .......+.++++.+++.+ ..++++.+||||||||++|
T Consensus 82 ~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 160 (251)
T PRK14244 82 VLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCI 160 (251)
T ss_pred HHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHH
Confidence 2356789999999988876 9999998764333221 2233456778899999864 4578899999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..+.+.|+++. +|+|||++|||++++..+||++++|++|++++.|+++++
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 161 ARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999985 489999999999999999999999999999999987765
No 223
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4e-45 Score=353.80 Aligned_cols=202 Identities=27% Similarity=0.371 Sum_probs=181.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.......++++
T Consensus 1 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~ 76 (204)
T PRK13538 1 MLEARNLACERD----ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDL 76 (204)
T ss_pred CeEEEEEEEEEC----CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhhe
Confidence 478999999996 4579999999999999999999999999999999999999999999999998764334456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|++|++.+++.+|+.||+.+.....+. ...+.+.++++.+++.+..++++.+||||||||++|||||+.+|++|||
T Consensus 77 ~~~~~~~~~~~~~tv~e~l~~~~~~~~~---~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llll 153 (204)
T PRK13538 77 LYLGHQPGIKTELTALENLRFYQRLHGP---GDDEALWEALAQVGLAGFEDVPVRQLSAGQQRRVALARLWLTRAPLWIL 153 (204)
T ss_pred EEeCCccccCcCCcHHHHHHHHHHhcCc---cHHHHHHHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999889999999999886544321 2345678899999998888999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEE
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM 550 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l 550 (566)
||||+|||+.++..++++|++++++|.|||++|||++++..+.+|++++
T Consensus 154 DEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 154 DEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 9999999999999999999998777899999999999999977888777
No 224
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1e-44 Score=365.45 Aligned_cols=223 Identities=26% Similarity=0.336 Sum_probs=193.1
Q ss_pred eEEEeeeEEEeCCc-----CCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc---
Q psy7366 342 VLVVKRLFKIYANS-----KGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--- 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~-----~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--- 413 (566)
+|+++|+++.|+.. ..++.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 58999999999620 0135799999999999999999999999999999999999999999999999887532
Q ss_pred -hHHhcCceEEEecCC--CCCCCCCHHHHHHHHHHh-cCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHH
Q psy7366 414 -MDLVRSYIGYCPQFD--ALNDRLTPREHLEFYSRV-RNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 -~~~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|+||++ .+++..|+.+|+.+.... ...........+.++++.+++. ...++++.+||||||||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~l 162 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVCL 162 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHHH
Confidence 123567899999997 466778999998764332 2233333445688999999997 57899999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..+.++|++++++ |.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 239 (268)
T PRK10419 163 ARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDK 239 (268)
T ss_pred HHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhc
Confidence 99999999999999999999999999999999998765 89999999999999999999999999999999988775
No 225
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.8e-45 Score=360.52 Aligned_cols=199 Identities=25% Similarity=0.373 Sum_probs=176.2
Q ss_pred eeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHH
Q psy7366 362 VNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLE 441 (566)
Q Consensus 362 l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~ 441 (566)
|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.... ...+|++|++.+++.+|+.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~----~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPG----PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCC----hhheEEecCcccCCCCCHHHHHH
Confidence 57899999999999999999999999999999999999999999999875421 12489999999999999999998
Q ss_pred HHHHh--cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHH
Q psy7366 442 FYSRV--RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTC 519 (566)
Q Consensus 442 ~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 519 (566)
+.... .........+.+.++++.+++.+..++++.+||||||||++|||||+.+|++|||||||+|||+.++..+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~ 156 (230)
T TIGR01184 77 LAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEE 156 (230)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHH
Confidence 75321 1233334455678999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 520 IERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 520 l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|.+++++ |+|||++|||++++..+||++++|++|++++.|+..++
T Consensus 157 l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 202 (230)
T TIGR01184 157 LMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEV 202 (230)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceec
Confidence 9998765 89999999999999999999999999999998876443
No 226
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-45 Score=362.49 Aligned_cols=217 Identities=20% Similarity=0.314 Sum_probs=188.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC--ch
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD--SM 414 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~--~~ 414 (566)
+++++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. ..
T Consensus 3 ~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 78 (249)
T PRK14253 3 KFNIENLDLFYG----ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDV 78 (249)
T ss_pred eEEEeccEEEEC----CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccch
Confidence 588999999996 46799999999999999999999999999999999999986 59999999988742 23
Q ss_pred HHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHHH
Q psy7366 415 DLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 415 ~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~la 489 (566)
...++.++|+||++.+++ .|+.||+.+.....+.. .....+.+.++++.+++. +..++++.+|||||||||+||
T Consensus 79 ~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 157 (249)
T PRK14253 79 ADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIA 157 (249)
T ss_pred HHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHH
Confidence 455678999999998887 79999998764333322 223345677788888874 356788999999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||+.+|++|||||||+|||+.++..++++|+++.+ +.|||++||+++++..+|||+++|++|+++..|+++++
T Consensus 158 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 158 RTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999866 58999999999999999999999999999999987664
No 227
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5e-45 Score=358.49 Aligned_cols=214 Identities=26% Similarity=0.355 Sum_probs=185.0
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhc
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVR 418 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~ 418 (566)
..+|+++|+++.|+ ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 5 ~~~i~~~~l~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 80 (225)
T PRK10247 5 SPLLQLQNVGYLAG----DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYR 80 (225)
T ss_pred CceEEEeccEEeeC----CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHH
Confidence 34799999999996 4679999999999999999999999999999999999999999999999988754 333456
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++++|+||++.+++ .|+.||+.+........ .....+.++++.+++. ...++++.+|||||+|||+|||||+.+|+
T Consensus 81 ~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (225)
T PRK10247 81 QQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQQ--PDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPK 157 (225)
T ss_pred hccEEEeccccccc-ccHHHHHHhHHhhcCCC--hHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 78999999998887 49999998754433221 1234577899999996 57799999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEE-CCEEEEecCc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMV-NGQFTCLGSA 561 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~-~G~i~~~g~~ 561 (566)
+|||||||+|||+.+++.+.++|+++.++ |.|||++|||++++. .||++++|+ ++..+.+|+.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~~~~~~ 222 (225)
T PRK10247 158 VLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEMQEARY 222 (225)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchHhhhhh
Confidence 99999999999999999999999998764 899999999999996 699999994 5556666654
No 228
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-44 Score=365.02 Aligned_cols=218 Identities=24% Similarity=0.335 Sum_probs=190.3
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~--- 412 (566)
.+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 24 ~~l~~~nl~~~~~----~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 24 TALEVRNLNLFYG----DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred cEEEEEEEEEEEC----CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 4799999999996 4579999999999999999999999999999999999987 489999999998753
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
.....++.++|+||++.+++. |+.||+.+.....+.. .....+.+.++++.+++. +..++++.+|||||||||+
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred CHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 233456789999999988886 9999998764433322 222345677888998885 3568899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..++++|+++++ +.|||++||+++++..+||++++|++|+++..|+++++
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 99999999999999999999999999999999999976 78999999999999999999999999999999987764
No 229
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-46 Score=344.04 Aligned_cols=220 Identities=23% Similarity=0.381 Sum_probs=204.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+++++|++|.|+ .+.+++++|++|++|.+++|+|||||||||||.+++.++++++|+|+++|.++.. ....+.++
T Consensus 1 MI~i~nv~K~y~----~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~ 76 (252)
T COG4604 1 MITIENVSKSYG----TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKK 76 (252)
T ss_pred CeeehhhhHhhC----CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHH
Confidence 478999999997 6889999999999999999999999999999999999999999999999999976 45667788
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHh--cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRV--RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
++.+-|+..+...+||+|-+.|+.-. .+....+++..++++++.++|.++.+++..+||||||||..||+.++++.+.
T Consensus 77 lSILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryLd~LSGGQrQRAfIAMVlaQdTdy 156 (252)
T COG4604 77 LSILKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYLDELSGGQRQRAFIAMVLAQDTDY 156 (252)
T ss_pred HHHHHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhHHhcccchhhhhhhheeeeccCcE
Confidence 99999999888899999999885322 3455677788899999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++||||.++||......+++.|++++++ |+||++|-||++++..++|+|+.|++|+++.+|+++++.
T Consensus 157 vlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii 224 (252)
T COG4604 157 VLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEII 224 (252)
T ss_pred EEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhc
Confidence 9999999999999999999999999987 999999999999999999999999999999999999863
No 230
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-44 Score=363.93 Aligned_cols=218 Identities=22% Similarity=0.348 Sum_probs=190.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC-----ccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT-----SGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~-----~G~i~~~g~~~~~---~ 413 (566)
+|+++|+++.|+ +..+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.. .
T Consensus 7 ~l~~~nl~~~~~----~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 7 AIKVNNLSFYYD----TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred eEEEeeEEEEeC----CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 689999999996 456999999999999999999999999999999999999985 8999999988642 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
...+++.++|+||++.+++ .|+.||+.+.....+. +.....+.+.++++.+++. +..++++.+|||||+||++|
T Consensus 83 ~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~l 161 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCI 161 (261)
T ss_pred hHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHH
Confidence 2345678999999988887 8999999876433332 2223345678889999874 35688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEEC-----CEEEEecCcc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVN-----GQFTCLGSAT 562 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~-----G~i~~~g~~~ 562 (566)
||||+.+|++|||||||+|||+.++..+.+.|+++++ +|.|||++|||++++.++|||+++|++ |++++.|+++
T Consensus 162 aral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~ 241 (261)
T PRK14258 162 ARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFGLTK 241 (261)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeCCHH
Confidence 9999999999999999999999999999999999865 489999999999999999999999999 9999999987
Q ss_pred cc
Q psy7366 563 HL 564 (566)
Q Consensus 563 ~l 564 (566)
++
T Consensus 242 ~~ 243 (261)
T PRK14258 242 KI 243 (261)
T ss_pred HH
Confidence 65
No 231
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-44 Score=366.09 Aligned_cols=218 Identities=23% Similarity=0.314 Sum_probs=190.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCCc--
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRDS-- 413 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~~-- 413 (566)
.+|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...
T Consensus 20 ~~l~i~nl~~~~~----~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~ 95 (276)
T PRK14271 20 PAMAAVNLTLGFA----GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRD 95 (276)
T ss_pred cEEEEeeEEEEEC----CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccch
Confidence 3689999999997 46799999999999999999999999999999999999985 799999999887542
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcC-CCchHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRN-VPSVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqrv~l 488 (566)
....+.+++|+||++.+|+ +|+++|+.+...... .........+.++++.+++.. ..++.+.+|||||+||++|
T Consensus 96 ~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~L 174 (276)
T PRK14271 96 VLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCL 174 (276)
T ss_pred hHHHhhheEEeccCCccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHH
Confidence 2345678999999998887 799999987543222 223333445678889999863 4578899999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.+++.+.+.|+++++ +.|||++|||++++..+|||+++|++|++++.|+++++
T Consensus 175 Aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 249 (276)
T PRK14271 175 ARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQL 249 (276)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999876 58999999999999999999999999999999988765
No 232
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.9e-45 Score=359.84 Aligned_cols=203 Identities=23% Similarity=0.330 Sum_probs=178.6
Q ss_pred eeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC----CccEEEEcCccCCCchHHhcCceEEEecCCC--CCCCC
Q psy7366 361 AVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP----TSGNAYVMNHSIRDSMDLVRSYIGYCPQFDA--LNDRL 434 (566)
Q Consensus 361 ~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~----~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~--l~~~~ 434 (566)
+|+|+||+|++|++++|+||||||||||+++|+|+++| ++|+|.++|+++... ...++.++|++|++. +++.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~-~~~~~~i~~~~q~~~~~~~~~~ 79 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL-SIRGRHIATIMQNPRTAFNPLF 79 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh-hhhhheeEEEecCchhhcCccc
Confidence 47899999999999999999999999999999999999 899999999987532 222357999999984 55678
Q ss_pred CHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC---CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHH
Q psy7366 435 TPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG---HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPG 511 (566)
Q Consensus 435 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~ 511 (566)
|+.+|+.+.....+.......+.+.++++.+++. +..++++.+|||||||||+|||||+.+|++|||||||+|||+.
T Consensus 80 t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~ 159 (230)
T TIGR02770 80 TMGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVV 159 (230)
T ss_pred CHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHH
Confidence 9999987654433322333456688999999997 5678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 512 ARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 512 ~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++..+.+.|++++++ |.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 160 ~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 213 (230)
T TIGR02770 160 NQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEI 213 (230)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999998765 89999999999999999999999999999999988776
No 233
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-44 Score=363.02 Aligned_cols=217 Identities=26% Similarity=0.360 Sum_probs=189.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~---~ 413 (566)
+++++|+++.|+ ++.+|+|+||+|.+||+++|+|+||||||||+|+|+|+++| ++|+|.++|+++.. .
T Consensus 7 ~l~~~~l~~~~~----~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 7 AIKVKDLSFYYN----TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred eEEEEEEEEEEC----CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 689999999996 45799999999999999999999999999999999999985 48999999998743 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcC-CCchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRN-VPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....+.+++|+||++.+|+ +|+.||+.+.....+ .+.....+.+.++++.+++. +..++++.+|||||||||+|
T Consensus 83 ~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 161 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCI 161 (259)
T ss_pred hHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHH
Confidence 2345678999999998887 899999987644332 22333345677889998873 46788999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE-----CCEEEEecCccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV-----NGQFTCLGSATH 563 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~-----~G~i~~~g~~~~ 563 (566)
||||+.+|++|||||||+|||+.++..++++|+++.+ +.|||++|||++++..+||++++|+ +|++++.|++++
T Consensus 162 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~~~ 240 (259)
T PRK14260 162 ARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVTTQ 240 (259)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCHHH
Confidence 9999999999999999999999999999999999865 6899999999999999999999998 599999999876
Q ss_pred c
Q psy7366 564 L 564 (566)
Q Consensus 564 l 564 (566)
+
T Consensus 241 ~ 241 (259)
T PRK14260 241 I 241 (259)
T ss_pred H
Confidence 5
No 234
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-44 Score=361.17 Aligned_cols=217 Identities=27% Similarity=0.356 Sum_probs=188.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCCc---
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRDS--- 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~~--- 413 (566)
+|+++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++...
T Consensus 6 ~i~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 81 (253)
T PRK14261 6 ILSTKNLNLWYG----EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGAD 81 (253)
T ss_pred eEEEeeeEEEEC----CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccc
Confidence 689999999996 46799999999999999999999999999999999999763 489999999987542
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.++|+||++.+++. |++||+.+.....+.. ....+..+.++++.+++. ...++++.+||||||||++|
T Consensus 82 ~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 160 (253)
T PRK14261 82 VVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCI 160 (253)
T ss_pred hhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHH
Confidence 23456789999999988875 9999998765443322 223345677888888874 34688999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|+++||||||+|||+.+++.+.++|+++++ +.|||++||+++++..+||++++|++|+++..|+++++
T Consensus 161 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 161 ARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999866 58999999999999999999999999999999987765
No 235
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-44 Score=364.54 Aligned_cols=218 Identities=20% Similarity=0.299 Sum_probs=187.5
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~-- 412 (566)
..+|+++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++..
T Consensus 18 ~~~l~~~nl~~~~~----~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~ 93 (274)
T PRK14265 18 HSVFEVEGVKVFYG----GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQ 93 (274)
T ss_pred CceEEEeeEEEEeC----CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEeccccc
Confidence 44899999999996 45799999999999999999999999999999999999863 68999999998743
Q ss_pred -chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 413 -SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 -~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
....++++++|+||++.+++. |+.+|+.+......... ...+.+.++++.+++. +..++++.+|||||||||+
T Consensus 94 ~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~ 171 (274)
T PRK14265 94 INSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANGYKG-NLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLC 171 (274)
T ss_pred chhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcCchH-HHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHH
Confidence 223456789999999988875 99999987543322211 2234466778888763 4567899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE---------CCEEEEe
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV---------NGQFTCL 558 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~---------~G~i~~~ 558 (566)
|||||+.+|++|||||||+|||+.++..+.++|.++++ +.|||++|||++++..+|||+++|+ +|++++.
T Consensus 172 LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 172 IARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 99999999999999999999999999999999999865 6899999999999999999999998 8999999
Q ss_pred cCcccc
Q psy7366 559 GSATHL 564 (566)
Q Consensus 559 g~~~~l 564 (566)
|+++++
T Consensus 251 g~~~~~ 256 (274)
T PRK14265 251 SPTEQM 256 (274)
T ss_pred CCHHHH
Confidence 998765
No 236
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-44 Score=359.50 Aligned_cols=218 Identities=22% Similarity=0.349 Sum_probs=187.2
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--C---CccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK--P---TSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--~---~~G~i~~~g~~~~~--- 412 (566)
.+++++|+++.|+ .+.+|+++||+|.+||+++|+||||||||||+++|+|+++ | ++|+|.++|+++..
T Consensus 4 ~~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 79 (252)
T PRK14255 4 KIITSSDVHLFYG----KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNE 79 (252)
T ss_pred ceEEEEeEEEEEC----CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccc
Confidence 4689999999997 4679999999999999999999999999999999999975 4 58999999998742
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPS-VLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~-~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~ 487 (566)
.....++.++|+||++.+++ .|+.+|+.+.....+... ......+.+.++.+++. +..++++.+||||||||++
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~ 158 (252)
T PRK14255 80 DVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVC 158 (252)
T ss_pred cHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHH
Confidence 22345678999999998887 699999987654333222 22234566778888763 4568899999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+.+|++|||||||+|||+.++..+.++|+++.+ +.|||++|||++++..+||++++|++|+++..|++.++
T Consensus 159 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 159 IARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999866 58999999999999999999999999999999987654
No 237
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.4e-45 Score=362.67 Aligned_cols=215 Identities=21% Similarity=0.361 Sum_probs=179.9
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+. +.+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 1 i~~~~l~~~~~~--~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (237)
T cd03252 1 ITFEHVRFRYKP--DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQV 78 (237)
T ss_pred CEEEEEEEecCC--CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcE
Confidence 468999999963 13569999999999999999999999999999999999999999999999988753 233456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHH-----HHHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLN-----TIVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
+|+||++.+++ .|+.||+.+... ........ ..+.++++.+ ++....++++.+|||||||||+|||||+.
T Consensus 79 ~~~~q~~~~~~-~tv~~nl~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~ 155 (237)
T cd03252 79 GVVLQENVLFN-RSIRDNIALADP--GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIH 155 (237)
T ss_pred EEEcCCchhcc-chHHHHhhccCC--CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhh
Confidence 99999988775 699999976431 11111111 1123445555 55556678999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++|||||||+|||+.++..+.+.|+++.+ |.|||++|||++++. .||++++|++|++++.|+++++
T Consensus 156 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~~~~~~~~ 223 (237)
T cd03252 156 NPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLSTVK-NADRIIVMEKGRIVEQGSHDEL 223 (237)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHHHH-hCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999999999864 899999999999996 5999999999999999988765
No 238
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=381.12 Aligned_cols=216 Identities=25% Similarity=0.333 Sum_probs=199.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC--chHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD--SMDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~--~~~~~~ 418 (566)
+.++++|++|+|+ ..++|+++||+|++||++||+|.||||||||+|+|+|.++|++|+|.++|+++.. ......
T Consensus 7 ~ll~~~~i~K~Fg----gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~ 82 (500)
T COG1129 7 PLLELRGISKSFG----GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALA 82 (500)
T ss_pred ceeeeecceEEcC----CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHh
Confidence 4689999999997 6789999999999999999999999999999999999999999999999998853 445567
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhc----CCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVR----NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
..|+.|+|+.+++|++||.||+.+..... -++++...+.+.++|+++++....+.++.+||.||||.|.|||||..
T Consensus 83 ~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArAl~~ 162 (500)
T COG1129 83 AGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGDLSIAQRQMVEIARALSF 162 (500)
T ss_pred CCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhhhCCHHHHHHHHHHHHHhc
Confidence 89999999999999999999997754322 24556778889999999999655899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
+++||||||||++|+....+.+++++++++++|.+||+|||.++++.++|||+.||++|+.+...+
T Consensus 163 ~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 163 DARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 999999999999999999999999999999999999999999999999999999999999999887
No 239
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-44 Score=360.16 Aligned_cols=219 Identities=23% Similarity=0.353 Sum_probs=190.3
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcC------ccCCC-c
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMN------HSIRD-S 413 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g------~~~~~-~ 413 (566)
+++.++|++++|+ ++.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++| .++.. .
T Consensus 9 ~~i~~~~~~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~ 84 (257)
T PRK14246 9 DVFNISRLYLYIN----DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQID 84 (257)
T ss_pred hheeeeeEEEecC----CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCC
Confidence 4699999999997 56799999999999999999999999999999999999999997776665 44432 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....+..++|+||++.+++.+|+.+|+.+.....+. +.......+.++++.+++. +..++.+..||+|||||++|
T Consensus 85 ~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 164 (257)
T PRK14246 85 AIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTI 164 (257)
T ss_pred HHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHH
Confidence 334567899999999999999999999876543222 2233445678899999985 35678999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|+++||||||+|||+.++..+.+.|.++.+ +.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 165 aral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 165 ARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999865 69999999999999999999999999999999988765
No 240
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-44 Score=404.32 Aligned_cols=224 Identities=24% Similarity=0.326 Sum_probs=194.4
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCC---------
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIR--------- 411 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~--------- 411 (566)
++|+++|+++.|+...+..++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|..+.
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 47999999999963222357999999999999999999999999999999999999999999999886431
Q ss_pred -C-ch---HHh-cCceEEEecCC--CCCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCCCC---ccccCcCcCC
Q psy7366 412 -D-SM---DLV-RSYIGYCPQFD--ALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFALGH---YSDREVRTLS 479 (566)
Q Consensus 412 -~-~~---~~~-~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LS 479 (566)
. .. ... +++||||+|++ .+++.+||.||+.+..... +.+.....+++.++++.+||.+ .+++++.+||
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~LS 170 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLS 170 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCccCC
Confidence 1 11 122 35799999998 6788899999998876542 4444455677889999999953 5789999999
Q ss_pred hhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEe
Q psy7366 480 GGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCL 558 (566)
Q Consensus 480 gGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~ 558 (566)
|||||||+|||||+.+|++|||||||++||+.++..++++|++++++ |+|||+||||++++..+||||++|++|++++.
T Consensus 171 gGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~~~ 250 (623)
T PRK10261 171 GGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVET 250 (623)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeeccc
Confidence 99999999999999999999999999999999999999999999865 99999999999999999999999999999999
Q ss_pred cCcccc
Q psy7366 559 GSATHL 564 (566)
Q Consensus 559 g~~~~l 564 (566)
|+++++
T Consensus 251 g~~~~~ 256 (623)
T PRK10261 251 GSVEQI 256 (623)
T ss_pred CCHHHh
Confidence 887654
No 241
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2e-44 Score=351.46 Aligned_cols=203 Identities=25% Similarity=0.378 Sum_probs=182.2
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+++++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ..++.
T Consensus 10 ~~l~~~~l~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~--~~~~~ 83 (214)
T PRK13543 10 PLLAAHALAFSRN----EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG--DRSRF 83 (214)
T ss_pred ceEEEeeEEEecC----CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch--hhhhc
Confidence 4799999999996 45799999999999999999999999999999999999999999999999887542 23457
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
++|++|++.+++.+|+.||+.+.....+. ...+.+.++++.+++.+..++++.+||||||||++|||+++.+|++||
T Consensus 84 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 160 (214)
T PRK13543 84 MAYLGHLPGLKADLSTLENLHFLCGLHGR---RAKQMPGSALAIVGLAGYEDTLVRQLSAGQKKRLALARLWLSPAPLWL 160 (214)
T ss_pred eEEeecCcccccCCcHHHHHHHHHHhcCC---cHHHHHHHHHHHcCChhhccCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999888889999999876544322 223456788999999888899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEEC
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVN 552 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~ 552 (566)
|||||+|||+.+++.+.+.|++++++|.|||++|||++++.++||++++|+.
T Consensus 161 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 161 LDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999888899999999999999999999999863
No 242
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-44 Score=382.87 Aligned_cols=224 Identities=25% Similarity=0.363 Sum_probs=197.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC----ccEEEEcCccCCCc----
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT----SGNAYVMNHSIRDS---- 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~----~G~i~~~g~~~~~~---- 413 (566)
+|+|+||++.|....+...+++||||+|.+||++||+|.+||||||+.++|.|++++. +|+|.++|+++...
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 7999999999975433346999999999999999999999999999999999999987 89999999977431
Q ss_pred hH-HhcCceEEEecCC--CCCCCCCHHHHHHHHHHhcC-CCchHHHHHHHHHHHHcCCCCccc--cCcCcCChhHHHHHH
Q psy7366 414 MD-LVRSYIGYCPQFD--ALNDRLTPREHLEFYSRVRN-VPSVLLNTIVNESLNKFALGHYSD--REVRTLSGGNKRKLS 487 (566)
Q Consensus 414 ~~-~~~~~i~~v~q~~--~l~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~--~~~~~LSgGqkqrv~ 487 (566)
.. ...+.|+|+||+| .+.|-+||.+.+.-....+. ....+..+++.++|+.++|.+... ++|++|||||||||+
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv~ 164 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRVM 164 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHHH
Confidence 12 2347899999997 36677999988876555544 346677888999999999976544 599999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||+||+.+|++||+||||++||+..+.+|+++|++++++ |.++|+||||+..+.++||||+||++|++++.|+++++.
T Consensus 165 iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~ 243 (539)
T COG1123 165 IAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEIL 243 (539)
T ss_pred HHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999865 999999999999999999999999999999999998763
No 243
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-44 Score=362.53 Aligned_cols=217 Identities=20% Similarity=0.279 Sum_probs=187.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~--- 412 (566)
.+|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 9 ~~l~i~~v~~~~~----~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 84 (264)
T PRK14243 9 TVLRTENLNVYYG----SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDV 84 (264)
T ss_pred eEEEEeeeEEEEC----CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccccc
Confidence 4799999999996 4579999999999999999999999999999999999986 479999999988742
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
.....+++++|++|++.+++ .|+.||+.+.....+.. ....+.+.++++.+++. ...++++.+||||||||++|
T Consensus 85 ~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 85 DPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARINGYK-GDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred ChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcCcc-hHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHH
Confidence 23345678999999998887 49999998765432222 12234566778887773 35678999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE---------CCEEEEec
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV---------NGQFTCLG 559 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~---------~G~i~~~g 559 (566)
||||+.+|++|||||||+|||+.++..++++|.++.+ +.|||++|||++++..+|||+++|+ +|++++.|
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~ 241 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFD 241 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeC
Confidence 9999999999999999999999999999999999866 5899999999999999999999998 89999999
Q ss_pred Ccccc
Q psy7366 560 SATHL 564 (566)
Q Consensus 560 ~~~~l 564 (566)
+++++
T Consensus 242 ~~~~~ 246 (264)
T PRK14243 242 RTEKI 246 (264)
T ss_pred CHHHH
Confidence 98775
No 244
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-44 Score=364.47 Aligned_cols=217 Identities=24% Similarity=0.411 Sum_probs=185.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.|+++|+++.|+. ++.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ...+..+
T Consensus 6 ~l~~~~l~~~~~~---~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~--~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRN---GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ--ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecC---CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH--hhccceE
Confidence 5899999999952 4579999999999999999999999999999999999999999999999987642 1123469
Q ss_pred EEEecCCCCC--CCCCHHHHHHHHHH----hcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 422 GYCPQFDALN--DRLTPREHLEFYSR----VRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 422 ~~v~q~~~l~--~~~tv~e~l~~~~~----~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
+|+||++.+. ...++.+|+.+... ....+.......+.++++.+++.+..++++.+||||||||++|||||+.+
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~laraL~~~ 160 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIGELSGGQKKRVFLARAIAQQ 160 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 9999997642 23468888754311 01112223345678899999998888999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||||+|||+.+++.+.++|++++++|.|||++|||++++..+||+++++ +|+++..|+++++
T Consensus 161 p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 161 GQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999877999999999999999999999777 8999999988765
No 245
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=2e-44 Score=353.92 Aligned_cols=202 Identities=28% Similarity=0.376 Sum_probs=176.7
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
+.++++++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|+++|+++..
T Consensus 23 l~~~~~~~~~~----~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~---------- 88 (224)
T cd03220 23 LGILGRKGEVG----EFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSL---------- 88 (224)
T ss_pred hhhhhhhhhcC----CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchh----------
Confidence 67888888886 5779999999999999999999999999999999999999999999999976421
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
..+...+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 89 -~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllD 167 (224)
T cd03220 89 -LGLGGGFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDILLID 167 (224)
T ss_pred -hcccccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 1112345567899999987655443333334456788899999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.++..+++.|++++++|.|||++|||++++..+||++++|++|++++.|
T Consensus 168 EP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 168 EVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999998777899999999999999999999999999998765
No 246
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-45 Score=323.09 Aligned_cols=219 Identities=25% Similarity=0.375 Sum_probs=202.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccC--CC-----ch
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI--RD-----SM 414 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~--~~-----~~ 414 (566)
.|.++++++.|+ ...+|-||+|+.+.||.+.++||+|+|||||++.+.=+.-|.+|+..+.|... +. ..
T Consensus 2 sirv~~in~~yg----~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i 77 (242)
T COG4161 2 SIQLNGINCFYG----AHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred ceEEcccccccc----cchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHH
Confidence 378999999997 57799999999999999999999999999999999999999999999988643 21 24
Q ss_pred HHhcCceEEEecCCCCCCCCCHHHHHHH-HHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHc
Q psy7366 415 DLVRSYIGYCPQFDALNDRLTPREHLEF-YSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 415 ~~~~~~i~~v~q~~~l~~~~tv~e~l~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
..+|+.+|+|||..+++|.+||.||+.- +.+..++++.+...++.++|+++.|.++.|+.|-.|||||+|||+|||||+
T Consensus 78 ~~lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~plhlsggqqqrvaiaralm 157 (242)
T COG4161 78 RDLRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPLHLSGGQQQRVAIARALM 157 (242)
T ss_pred HHHHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCceecccchhhhHHHHHHHh
Confidence 5678999999999999999999999754 566778888888999999999999999999999999999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.+|++|++||||++|||+-..++.++|++++..|.|=+++||+.+.+.+.+.+|+.|.+|+|++.|+.+.+
T Consensus 158 mkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a~~f 228 (242)
T COG4161 158 MEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred cCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987654
No 247
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-45 Score=359.31 Aligned_cols=215 Identities=24% Similarity=0.402 Sum_probs=181.9
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+.. +.++++++||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++.+
T Consensus 1 i~~~~l~~~~~~~--~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (234)
T cd03251 1 VEFKNVTFRYPGD--GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQI 78 (234)
T ss_pred CEEEEEEEEeCCC--CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhE
Confidence 4689999999621 1369999999999999999999999999999999999999999999999988753 233456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHH-----HHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNT-----IVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
+|+||++.+++ .|++||+.+.... ........ .+.++++.+ ++....++++.+||||||||++|||||+.
T Consensus 79 ~~~~q~~~~~~-~tv~enl~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~ 155 (234)
T cd03251 79 GLVSQDVFLFN-DTVAENIAYGRPG--ATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLK 155 (234)
T ss_pred EEeCCCCeecc-ccHHHHhhccCCC--CCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999998876 6999999765321 11111111 234556666 66667788999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++|||||||+|||+.+++.+.+.|+++.+ +.|||++|||++++.. ||++++|++|+++..|+++++
T Consensus 156 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~-~d~v~~l~~G~i~~~~~~~~~ 223 (234)
T cd03251 156 DPPILILDEATSALDTESERLVQAALERLMK-NRTTFVIAHRLSTIEN-ADRIVVLEDGKIVERGTHEEL 223 (234)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHhh-CCEEEEecCCeEeeeCCHHHH
Confidence 9999999999999999999999999999864 8999999999999976 999999999999999987765
No 248
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-44 Score=394.51 Aligned_cols=217 Identities=28% Similarity=0.388 Sum_probs=192.7
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC--chHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD--SMDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~--~~~~~~ 418 (566)
++++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. ....++
T Consensus 3 ~~l~~~~l~~~~~----~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 78 (501)
T PRK11288 3 PYLSFDGIGKTFP----GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALA 78 (501)
T ss_pred ceEEEeeeEEEEC----CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHh
Confidence 3699999999996 4579999999999999999999999999999999999999999999999998753 223456
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHH--hcC-CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSR--VRN-VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~--~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
++++|+||++.+++.+|+.+|+.+... ..+ .+.....+++.++++.+++.+..++++.+|||||||||+|||||+.+
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~~~ 158 (501)
T PRK11288 79 AGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALARN 158 (501)
T ss_pred CCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHHhC
Confidence 789999999999999999999987532 112 22334456788999999998878999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSA 561 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~ 561 (566)
|++|||||||+|||+.+++.++++|++++++|.|||++|||++++..+|||+++|++|+++..++.
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 159 ARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 999999999999999999999999999987799999999999999999999999999999877653
No 249
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.9e-44 Score=394.94 Aligned_cols=219 Identities=26% Similarity=0.394 Sum_probs=192.1
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC--CccEEEEcCccCCCc-h-HHh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP--TSGNAYVMNHSIRDS-M-DLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~-~-~~~ 417 (566)
+|+++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... . ...
T Consensus 1 ~l~i~~l~~~~~----~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (500)
T TIGR02633 1 LLEMKGIVKTFG----GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTE 76 (500)
T ss_pred CEEEEeEEEEeC----CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHH
Confidence 378999999996 46799999999999999999999999999999999999987 799999999987542 2 234
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhc--C--CCchHHHHHHHHHHHHcCCCCcc-ccCcCcCChhHHHHHHHHHHH
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVR--N--VPSVLLNTIVNESLNKFALGHYS-DREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~--~--~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGqkqrv~la~al 492 (566)
+++++|+||++.+++.+|+.||+.+..... . .......+++.++++.+++.+.. ++++.+|||||||||+|||||
T Consensus 77 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al 156 (500)
T TIGR02633 77 RAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKAL 156 (500)
T ss_pred hCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHH
Confidence 567999999998999999999998754321 1 22233455688999999998654 678999999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+.+|++|||||||+|||+.++..+.++|++++++|.|||++|||++++..+||++++|++|+++..++++++
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 157 NKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 999999999999999999999999999999987899999999999999999999999999999999887653
No 250
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=4.9e-44 Score=357.61 Aligned_cols=218 Identities=23% Similarity=0.338 Sum_probs=187.6
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCC--CCCCccEEEEcCccCCCc-hHHh
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGA--IKPTSGNAYVMNHSIRDS-MDLV 417 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~--~~~~~G~i~~~g~~~~~~-~~~~ 417 (566)
.+++++|+++.|+ ++.+|+++||+|++||++||+|+||||||||+++|+|+ ++|++|+|+++|.++... ....
T Consensus 6 ~~l~~~~l~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T CHL00131 6 PILEIKNLHASVN----ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEER 81 (252)
T ss_pred ceEEEEeEEEEeC----CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhh
Confidence 3699999999996 45699999999999999999999999999999999998 589999999999987542 2222
Q ss_pred c-CceEEEecCCCCCCCCCHHHHHHHHHHhc----CCC---chHHHHHHHHHHHHcCCC-CccccCcC-cCChhHHHHHH
Q psy7366 418 R-SYIGYCPQFDALNDRLTPREHLEFYSRVR----NVP---SVLLNTIVNESLNKFALG-HYSDREVR-TLSGGNKRKLS 487 (566)
Q Consensus 418 ~-~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~---~~~~~~~~~~~l~~~~l~-~~~~~~~~-~LSgGqkqrv~ 487 (566)
+ ..++|++|++.+++.+|+.+|+.+..... ... .......+.++++.+++. ...++++. .|||||+|||+
T Consensus 82 ~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~ 161 (252)
T CHL00131 82 AHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNE 161 (252)
T ss_pred heeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHH
Confidence 2 35899999999999999999987643211 111 112235677899999997 46788887 59999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhh-CCEEEEEECCEEEEecCcc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEAL-CTKLTIMVNGQFTCLGSAT 562 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~-~drv~~l~~G~i~~~g~~~ 562 (566)
|||||+.+|++|||||||+|||+.++..++++|++++++|.|||++|||++++..+ ||++++|++|++++.|+++
T Consensus 162 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~ 237 (252)
T CHL00131 162 ILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAE 237 (252)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChh
Confidence 99999999999999999999999999999999999887799999999999999887 8999999999999999886
No 251
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-44 Score=394.56 Aligned_cols=216 Identities=23% Similarity=0.292 Sum_probs=191.2
Q ss_pred EeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHhcCceE
Q psy7366 345 VKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVRSYIG 422 (566)
Q Consensus 345 ~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~~~i~ 422 (566)
++|+++.|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ....+++++
T Consensus 1 ~~nl~~~~~----~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 76 (491)
T PRK10982 1 MSNISKSFP----GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGIS 76 (491)
T ss_pred CCceEEEeC----CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEE
Confidence 368999996 46799999999999999999999999999999999999999999999999987532 233467899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHH-hcC--CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSR-VRN--VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~-~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
|+||++.+++.+||.||+.+... ..+ .......+.+.++++.+++....++++.+|||||||||+|||||+.+|++|
T Consensus 77 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p~ll 156 (491)
T PRK10982 77 MVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNAKIV 156 (491)
T ss_pred EEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999988899999999986432 111 122333456889999999988889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.++..++++|++++++|.|||++|||++++..+|||+++|++|+++..|+++++
T Consensus 157 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 221 (491)
T PRK10982 157 IMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGL 221 (491)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhC
Confidence 99999999999999999999999987899999999999999999999999999999999987664
No 252
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.5e-44 Score=348.95 Aligned_cols=198 Identities=25% Similarity=0.364 Sum_probs=178.6
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
|+++|+++.|+ ++.+|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.......+++++
T Consensus 1 l~i~~l~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 76 (201)
T cd03231 1 LEADELTCERD----GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLL 76 (201)
T ss_pred CEEEEEEEEeC----CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheE
Confidence 46899999996 46799999999999999999999999999999999999999999999999887543345567899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|++|++.+++.+|++||+.++... ...+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||||
T Consensus 77 ~~~q~~~~~~~~tv~e~l~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 150 (201)
T cd03231 77 YLGHAPGIKTTLSVLENLRFWHAD------HSDEQVEEALARVGLNGFEDRPVAQLSAGQQRRVALARLLLSGRPLWILD 150 (201)
T ss_pred EeccccccCCCcCHHHHHHhhccc------ccHHHHHHHHHHcCChhhhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999888889999999875321 12356788999999988889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEE
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM 550 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l 550 (566)
|||+|||+.+++.+.+.|+++.++|.|+|++|||..+...+|++++++
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 151 EPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999999998877999999999999999999999887
No 253
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-44 Score=358.43 Aligned_cols=217 Identities=23% Similarity=0.296 Sum_probs=189.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~--- 412 (566)
.++.++++++.|+ ++.+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++..
T Consensus 7 ~~~~~~~~~~~~~----~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~ 82 (261)
T PRK14263 7 IVMDCKLDKIFYG----NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGV 82 (261)
T ss_pred ceEEEEeEEEEeC----CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEecccccc
Confidence 4689999999996 56799999999999999999999999999999999999986 79999999998743
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC----ccccCcCcCChhHHHHHHH
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH----YSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----~~~~~~~~LSgGqkqrv~l 488 (566)
....+++.++|+||++.++ .+|+.||+.+........ ......+.++++.+++.+ ..++++.+|||||+||++|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 83 DPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNRYK-GDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred chHhhhhceEEEecCCccc-cccHHHHHHHHHhhcCch-HHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHH
Confidence 2234567899999999887 589999998765433322 233456788999999853 3467889999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE--------CCEEEEecC
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV--------NGQFTCLGS 560 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~--------~G~i~~~g~ 560 (566)
||||+.+|++|||||||+|||+.++..++++|+++.+ +.|||++||+++++..+|||+++|+ +|++++.|+
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~-~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~ 239 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKK-DYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGP 239 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCC
Confidence 9999999999999999999999999999999999854 7899999999999999999999996 899999999
Q ss_pred cccc
Q psy7366 561 ATHL 564 (566)
Q Consensus 561 ~~~l 564 (566)
++++
T Consensus 240 ~~~~ 243 (261)
T PRK14263 240 TAQI 243 (261)
T ss_pred HHHH
Confidence 8765
No 254
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.8e-44 Score=359.64 Aligned_cols=211 Identities=20% Similarity=0.296 Sum_probs=183.9
Q ss_pred EEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCceE
Q psy7366 344 VVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYIG 422 (566)
Q Consensus 344 ~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i~ 422 (566)
+++||++. .+|+|+||+|++|++++|+||||||||||+++|+|++++ +|+|.++|+++.. .....++.++
T Consensus 2 ~~~~l~~~--------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~ 72 (248)
T PRK03695 2 QLNDVAVS--------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRA 72 (248)
T ss_pred cccccchh--------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheE
Confidence 45677653 279999999999999999999999999999999999864 9999999998754 3334456799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcC-------C
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLG-------N 495 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~-------~ 495 (566)
|+||++.+++.+|+.+|+.+.... ........+.+.++++.+++.+..++++.+||||||||++|||||+. +
T Consensus 73 ~v~q~~~~~~~~tv~~nl~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~p~ 151 (248)
T PRK03695 73 YLSQQQTPPFAMPVFQYLTLHQPD-KTRTEAVASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDINPA 151 (248)
T ss_pred EecccCccCCCccHHHHHHhcCcc-CCCcHHHHHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccCCC
Confidence 999998888889999999875321 22233345678899999999888899999999999999999999997 6
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||||+|||+.++..+.++|++++++|.|||++|||++++..+||++++|++|++++.|+.+++
T Consensus 152 p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 152 GQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEV 220 (248)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 799999999999999999999999999987799999999999999999999999999999999987765
No 255
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.5e-44 Score=354.01 Aligned_cols=206 Identities=28% Similarity=0.463 Sum_probs=175.8
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+. +.+.+|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|+++.. .....++.+
T Consensus 3 l~~~~l~~~~~~--~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 3 IEFRNVSFSYPN--QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred EEEEEEEEEcCC--CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 789999999962 12569999999999999999999999999999999999999999999999988743 223346689
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccC-----------cCcCChhHHHHHHHHH
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDRE-----------VRTLSGGNKRKLSTAI 490 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgGqkqrv~la~ 490 (566)
+|++|++.+++ .|+.||+.+.... .. ...+.++++.+++.+..++. +.+||||||||++|||
T Consensus 81 ~~~~q~~~~~~-~tv~e~l~~~~~~---~~---~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~ 153 (220)
T cd03245 81 GYVPQDVTLFY-GTLRDNITLGAPL---AD---DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALAR 153 (220)
T ss_pred EEeCCCCcccc-chHHHHhhcCCCC---CC---HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHH
Confidence 99999998876 6999998764211 11 23456777888876655554 4699999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
||+.+|++|||||||+|||+.++..++++|++++++ .|||++|||++++ .+||++++|++|++++.|
T Consensus 154 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~-~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 154 ALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSLL-DLVDRIIVMDSGRIVADG 220 (220)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHHH-HhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999999999998764 8999999999987 699999999999998654
No 256
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-44 Score=367.40 Aligned_cols=222 Identities=23% Similarity=0.362 Sum_probs=191.0
Q ss_pred CCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC-
Q psy7366 339 SGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD- 412 (566)
Q Consensus 339 ~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~- 412 (566)
...+++++|+++.|.. +.+++|+|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++..
T Consensus 77 ~~~~i~~~nls~~y~~--~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 77 HANVFEIRNFNFWYMN--RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred cCceEEEEeeEEEecC--CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 3458999999999962 23569999999999999999999999999999999999986 579999999999853
Q ss_pred --chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCch-HHHHHHHHHHHHcCCC----CccccCcCcCChhHHHH
Q psy7366 413 --SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSV-LLNTIVNESLNKFALG----HYSDREVRTLSGGNKRK 485 (566)
Q Consensus 413 --~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~-~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqr 485 (566)
....+++.++|+||++.+|+ .|++||+.|.....+.... ...+.+.++++.+++. ...++++.+||||||||
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqR 233 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQR 233 (329)
T ss_pred ccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHH
Confidence 22356778999999998885 6999999876433322222 2233467788888873 34678999999999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 486 LSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 486 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++|||||+.+|+||||||||++||+.+...+.+.|+++.+ ++|||++||+++++.++||||++|++|++++.|+++++
T Consensus 234 l~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l 311 (329)
T PRK14257 234 LCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTI 311 (329)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998865 69999999999999999999999999999999999876
No 257
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-44 Score=345.42 Aligned_cols=195 Identities=23% Similarity=0.314 Sum_probs=171.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC---CCccEEEEcCccCCCchHHhc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK---PTSGNAYVMNHSIRDSMDLVR 418 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~---~~~G~i~~~g~~~~~~~~~~~ 418 (566)
.+.++|+++.|+...+++.+|+++||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.......+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~~~~~ 82 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYP 82 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccchhhhc
Confidence 47899999999865456789999999999999999999999999999999999999 899999999998765334456
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
+.++|++|++.+++.+|++||+.+..... .++++.+||+||+||++|||||+.+|++
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----------------------~~~~~~~LS~Ge~qrl~laral~~~p~l 139 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALRCK-----------------------GNEFVRGISGGERKRVSIAEALVSRASV 139 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhhhc-----------------------cccchhhCCHHHHHHHHHHHHHhhCCCE
Confidence 78999999998999999999997643210 4678899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEE-EccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVIL-TSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~-vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||||||+|||+.+++.++++|+++.++ +.|+|+ ++|+.+++.++||++++|++|+++..|
T Consensus 140 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 140 LCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999998765 666555 566678999999999999999998754
No 258
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-44 Score=356.15 Aligned_cols=217 Identities=21% Similarity=0.334 Sum_probs=188.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC---c
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD---S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~---~ 413 (566)
+++++|+++.|+ ++++|+|+||+|.+||+++|+||||||||||+++|+|+.+ |++|+|.++|.++.. .
T Consensus 3 ~l~~~~v~~~~~----~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 78 (250)
T PRK14266 3 RIEVENLNTYFD----DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVD 78 (250)
T ss_pred EEEEEeEEEEeC----CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEccccccc
Confidence 478999999996 4679999999999999999999999999999999999864 489999999998753 2
Q ss_pred hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCC-CchHHHHHHHHHHHHcCCC----CccccCcCcCChhHHHHHHH
Q psy7366 414 MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVLLNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkqrv~l 488 (566)
....+++++|+||++.+|+. |+.||+.+.....+. ......+.+.++++.+++. +..++++.+||+|||||++|
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~l 157 (250)
T PRK14266 79 VVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRLCI 157 (250)
T ss_pred HHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHH
Confidence 33456789999999988875 999999875433322 2233456678889999874 34688899999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..+.++|+++++ +.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 158 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 158 ARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999854 79999999999999999999999999999999998765
No 259
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=6.3e-44 Score=350.57 Aligned_cols=210 Identities=28% Similarity=0.404 Sum_probs=178.3
Q ss_pred eEEEeeeEEEeCCcC--C-CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcC--c--cCCC-c
Q psy7366 342 VLVVKRLFKIYANSK--G-TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMN--H--SIRD-S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~--~-~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g--~--~~~~-~ 413 (566)
+++++|+++.|+... + .+.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.++| . ++.. .
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 478999999995210 1 24699999999999999999999999999999999999999999999984 2 4322 1
Q ss_pred hH---H-hcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHH
Q psy7366 414 MD---L-VRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ~~---~-~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~l 488 (566)
.. . .+++++|+||++.+++.+|+.||+.+.....+.......+.+.++++.+++.+ ..++++.+||||||||++|
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~l 160 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRVNI 160 (224)
T ss_pred HHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHHHH
Confidence 11 1 24579999999999999999999987544333333344567788999999975 4588999999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV 551 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~ 551 (566)
||||+.+|++|||||||+|||+.+++.+.+.|++++++|.|||++||+.+++..+|||++.+.
T Consensus 161 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 161 ARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 999999999999999999999999999999999997779999999999999999999998763
No 260
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.7e-44 Score=394.40 Aligned_cols=218 Identities=29% Similarity=0.368 Sum_probs=189.9
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC--CCCccEEEEc--------------
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI--KPTSGNAYVM-------------- 406 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~--~~~~G~i~~~-------------- 406 (566)
|+++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+|+|+|++ +|++|+|.++
T Consensus 1 l~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~ 76 (520)
T TIGR03269 1 IEVKNLTKKFD----GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPS 76 (520)
T ss_pred CEEEEEEEEEC----CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccc
Confidence 46899999996 467999999999999999999999999999999999997 7999999997
Q ss_pred ---------CccCC-------C-c---hHHhcCceEEEecC-CCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHc
Q psy7366 407 ---------NHSIR-------D-S---MDLVRSYIGYCPQF-DALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKF 465 (566)
Q Consensus 407 ---------g~~~~-------~-~---~~~~~~~i~~v~q~-~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~ 465 (566)
|.++. . . ....++.++|+||+ +.+++.+|+.||+.+.....+.+.....+++.++++.+
T Consensus 77 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (520)
T TIGR03269 77 KVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMV 156 (520)
T ss_pred ccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc
Confidence 22221 0 0 12345679999998 67888899999998865544444444556788999999
Q ss_pred CCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhC
Q psy7366 466 ALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALC 544 (566)
Q Consensus 466 ~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~ 544 (566)
++.+..++++.+|||||||||+|||||+.+|++|||||||++||+.++..++++|++++++ |.|||+||||++++..+|
T Consensus 157 gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~ 236 (520)
T TIGR03269 157 QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLS 236 (520)
T ss_pred CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhc
Confidence 9998889999999999999999999999999999999999999999999999999998664 899999999999999999
Q ss_pred CEEEEEECCEEEEecCcccc
Q psy7366 545 TKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 545 drv~~l~~G~i~~~g~~~~l 564 (566)
|++++|++|+++..|+++++
T Consensus 237 d~i~~l~~G~i~~~g~~~~~ 256 (520)
T TIGR03269 237 DKAIWLENGEIKEEGTPDEV 256 (520)
T ss_pred CEEEEEeCCEEeeecCHHHH
Confidence 99999999999998887654
No 261
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.7e-44 Score=356.48 Aligned_cols=216 Identities=26% Similarity=0.416 Sum_probs=178.7
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+.. +++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 1 l~i~~l~~~~~~~-~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (238)
T cd03249 1 IEFKNVSFRYPSR-PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQI 79 (238)
T ss_pred CeEEEEEEecCCC-CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhE
Confidence 4689999999631 12469999999999999999999999999999999999999999999999988753 233445679
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHH-----HHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNT-----IVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
+|+||++.+++ .|+.||+.+..... ....... .+.++++.+ ++....++++.+|||||||||+|||||+.
T Consensus 80 ~~~~q~~~~~~-~tv~e~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~ 156 (238)
T cd03249 80 GLVSQEPVLFD-GTIAENIRYGKPDA--TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLR 156 (238)
T ss_pred EEECCchhhhh-hhHHHHhhccCCCC--CHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhc
Confidence 99999988776 69999997643211 1111111 122333333 45555678899999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++|||||||+|||+.+++.+++.|+++. +|.|||++|||++++. +||++++|++|++++.++.+++
T Consensus 157 ~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~~~-~~d~v~~l~~G~i~~~~~~~~~ 224 (238)
T cd03249 157 NPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLSTIR-NADLIAVLQNGQVVEQGTHDEL 224 (238)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHh-hCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999987 7899999999999997 8999999999999999887654
No 262
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-44 Score=336.85 Aligned_cols=173 Identities=45% Similarity=0.774 Sum_probs=160.0
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ +.++|+++||++.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.......++.++
T Consensus 1 l~~~~l~~~~~----~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 76 (173)
T cd03230 1 IEVRNLSKRYG----KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIG 76 (173)
T ss_pred CEEEEEEEEEC----CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEE
Confidence 46899999996 35699999999999999999999999999999999999999999999999987543344567899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++.+|+.||+. |||||+||++|||||+.+|++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~~~------------------------------------LS~G~~qrv~laral~~~p~illlD 120 (173)
T cd03230 77 YLPEEPSLYENLTVRENLK------------------------------------LSGGMKQRLALAQALLHDPELLILD 120 (173)
T ss_pred EEecCCccccCCcHHHHhh------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEe
Confidence 9999999998899999873 9999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
|||+|||+.++..+.++|+++.++|.|+|++|||.+++..+||++++|++|++
T Consensus 121 EPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 121 EPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999999999987789999999999999999999999999974
No 263
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-43 Score=356.43 Aligned_cols=219 Identities=23% Similarity=0.287 Sum_probs=188.5
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC--
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD-- 412 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~-- 412 (566)
...|+++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 14 ~~~l~~~~l~~~~~----~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 14 QQKSEVNKLNFYYG----GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CceEEEEEEEEEEC----CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 34699999999996 45799999999999999999999999999999999999975 79999999987631
Q ss_pred ---chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCch-HHHHHHHHHHHHcCCC----CccccCcCcCChhHHH
Q psy7366 413 ---SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSV-LLNTIVNESLNKFALG----HYSDREVRTLSGGNKR 484 (566)
Q Consensus 413 ---~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~-~~~~~~~~~l~~~~l~----~~~~~~~~~LSgGqkq 484 (566)
....+++.++|+||++.+++. |+.||+.+.....+.... ..++.+.++++.+++. +..++++.+|||||||
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 168 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQ 168 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHH
Confidence 123456789999999988886 999999876443333222 2235567788888763 4567889999999999
Q ss_pred HHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 485 KLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 485 rv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++|||||+.+|++|||||||+|||+.++..+.+.|+++++ +.|||++||+++++..+|||+++|++|++++.|+.+++
T Consensus 169 rv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 247 (265)
T PRK14252 169 RLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQQAARVSDYTAYMYMGELIEFGATDTI 247 (265)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999865 68999999999999999999999999999999988765
No 264
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=8.4e-44 Score=392.19 Aligned_cols=223 Identities=22% Similarity=0.320 Sum_probs=192.1
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCCc-hH
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRDS-MD 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~~-~~ 415 (566)
+++++|+++.|+...+.+.+|+++||+|.+||++||+||||||||||+|+|+|+++| ++|+|.++|+++... ..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 699999999996211125799999999999999999999999999999999999986 799999999987542 11
Q ss_pred ---Hh-cCceEEEecCCC--CCCCCCHHHHHHHHHHh-cCCCchHHHHHHHHHHHHcCCCC---ccccCcCcCChhHHHH
Q psy7366 416 ---LV-RSYIGYCPQFDA--LNDRLTPREHLEFYSRV-RNVPSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRK 485 (566)
Q Consensus 416 ---~~-~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgGqkqr 485 (566)
.. ++++||+||++. +++.+|+.+|+.+.... .+.+.....+++.++++.+++.+ ..++++.+||||||||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~qr 164 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQR 164 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHHHH
Confidence 22 357999999974 66778999998765432 23344445677889999999975 3589999999999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 486 LSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 486 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+|||||+.+|++|||||||++||+.++..++++|++++++ |.|||+||||++++..+|||+++|++|++++.|+++++
T Consensus 165 v~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 244 (529)
T PRK15134 165 VMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQNRAATL 244 (529)
T ss_pred HHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999765 89999999999999999999999999999999987664
No 265
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-44 Score=354.31 Aligned_cols=214 Identities=25% Similarity=0.381 Sum_probs=178.6
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+. .+.+++|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++.+
T Consensus 3 l~~~~l~~~~~~---~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 3 IEFENVNFSYDE---KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred EEEEEEEEecCC---CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 789999999962 3469999999999999999999999999999999999999999999999988753 233456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHH-----HHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNT-----IVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
+|+||++.+++. |+.||+.++.... ....... .+.++++.+ ++....++++.+|||||||||+|||||+.
T Consensus 80 ~~~~q~~~~~~~-tv~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 80 GVVLQDTFLFSG-TIMENIRLGRPNA--TDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred EEecCCchhhhh-HHHHHHhccCCCC--CHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999988775 9999997653211 1111111 122333433 45555667789999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++|||||||+|||+.+++.+++.|+++. +|.|||++||+++++.. ||++++|++|++++.++.+++
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~~~~~~ 224 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLSTIKN-ADKILVLDDGKIIEEGTHDEL 224 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHhh-CCEEEEEeCCeEEEeCCHHHH
Confidence 999999999999999999999999999985 48999999999999864 999999999999999887665
No 266
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7.3e-44 Score=427.01 Aligned_cols=222 Identities=37% Similarity=0.636 Sum_probs=203.9
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
..|+++|++|.|+. +++.+++|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++.......++.
T Consensus 927 ~~L~I~nLsK~y~~--~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP--SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecC--CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcchHHHHhhc
Confidence 47999999999952 2467999999999999999999999999999999999999999999999999986555556788
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
+||+||++.+++.+||+||+.++.+.++.+....++++.++++.++|.+..++++.+|||||||||+||+||+.+|++||
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~PkVLL 1084 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVV 1084 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999998776665555556678999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||||+|||+.+++.++++|++++ +|+|||++|||++++..+|||+++|++|++++.|++++++
T Consensus 1085 LDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk 1148 (2272)
T TIGR01257 1085 LDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLK 1148 (2272)
T ss_pred EECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999985 5999999999999999999999999999999999988775
No 267
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.3e-43 Score=353.79 Aligned_cols=219 Identities=20% Similarity=0.267 Sum_probs=183.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC--CCCccEEEEcCccCCCc-hH-Hh
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI--KPTSGNAYVMNHSIRDS-MD-LV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~--~~~~G~i~~~g~~~~~~-~~-~~ 417 (566)
+++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|++ +|++|+|.++|+++... .. ..
T Consensus 1 ~i~~~nl~~~~~----~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (248)
T PRK09580 1 MLSIKDLHVSVE----DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRA 76 (248)
T ss_pred CeEEEEEEEEeC----CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHh
Confidence 478999999996 457999999999999999999999999999999999995 69999999999887542 22 23
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHH-hc---C---CCchHHHHHHHHHHHHcCCC-CccccCcC-cCChhHHHHHHH
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSR-VR---N---VPSVLLNTIVNESLNKFALG-HYSDREVR-TLSGGNKRKLST 488 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~-~~---~---~~~~~~~~~~~~~l~~~~l~-~~~~~~~~-~LSgGqkqrv~l 488 (566)
+..++|++|++.+++.+|..+++.+... .. . .........+.++++.+++. ...++++. +|||||||||+|
T Consensus 77 ~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 77 GEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred hcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 4579999999988887777666543211 10 0 01112245677889999995 45677775 899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhh-CCEEEEEECCEEEEecCcccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEAL-CTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~-~drv~~l~~G~i~~~g~~~~l 564 (566)
||||+.+|++|||||||+|||+.++..+.++|+++++.|+|||++|||++++..+ ||++++|++|+++..|+++.+
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999987789999999999999887 899999999999999987643
No 268
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-43 Score=354.07 Aligned_cols=211 Identities=23% Similarity=0.350 Sum_probs=185.5
Q ss_pred eEEEeeeEEEeCCc----------------CCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEE
Q psy7366 342 VLVVKRLFKIYANS----------------KGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYV 405 (566)
Q Consensus 342 ~l~~~~l~~~y~~~----------------~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~ 405 (566)
.++++|+++.|... .+.+++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 47888888887542 13456899999999999999999999999999999999999999999999
Q ss_pred cCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHH
Q psy7366 406 MNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRK 485 (566)
Q Consensus 406 ~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqr 485 (566)
+|. +++++|++.+++.+|+.+|+.+.....+.........+..+++.+++.+..++++.+|||||+||
T Consensus 84 ~g~------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Gq~qr 151 (264)
T PRK13546 84 NGE------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQPVKKYSSGMRAK 151 (264)
T ss_pred CCE------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCcccCCHHHHHH
Confidence 984 46778887777889999999875443344444444556778889999988899999999999999
Q ss_pred HHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 486 LSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 486 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|+|||||+.+|++|||||||+|||+.++..+++.|.+++++|.|||++||+++++..+||++++|++|++++.|+++++
T Consensus 152 v~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 230 (264)
T PRK13546 152 LGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKDYGELDDV 230 (264)
T ss_pred HHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999977799999999999999999999999999999999988765
No 269
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=9.5e-44 Score=354.58 Aligned_cols=201 Identities=26% Similarity=0.444 Sum_probs=178.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ..+
T Consensus 4 ~l~~~~l~~~~~----~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~----------~~i 69 (251)
T PRK09544 4 LVSLENVSVSFG----QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGK----------LRI 69 (251)
T ss_pred EEEEeceEEEEC----CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCc----------cCE
Confidence 689999999996 457999999999999999999999999999999999999999999999872 369
Q ss_pred EEEecCCCCCCC--CCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 422 GYCPQFDALNDR--LTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 422 ~~v~q~~~l~~~--~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
+|+||++.+++. .|+.+++.+.. +. ..+.+.++++.+++.+..++++.+|||||||||+|||||+.+|++|
T Consensus 70 ~~v~q~~~~~~~l~~~~~~~~~~~~---~~----~~~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p~ll 142 (251)
T PRK09544 70 GYVPQKLYLDTTLPLTVNRFLRLRP---GT----KKEDILPALKRVQAGHLIDAPMQKLSGGETQRVLLARALLNRPQLL 142 (251)
T ss_pred EEeccccccccccChhHHHHHhccc---cc----cHHHHHHHHHHcCChHHHhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999877665 37777664321 11 1345678999999998889999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||||||+|||+.++..+++.|+++.++ |.|||++|||++++..+||++++|++ ++++.|+++++
T Consensus 143 lLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~ 207 (251)
T PRK09544 143 VLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVV 207 (251)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHH
Confidence 999999999999999999999998776 89999999999999999999999965 79999987765
No 270
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=8.2e-44 Score=366.91 Aligned_cols=216 Identities=27% Similarity=0.395 Sum_probs=200.2
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCC--CchHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIR--DSMDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~--~~~~~~~ 418 (566)
..+++++++|.|+ +..++++|||+|++|||.||+|.||||||||+++|.|+++|++|+|+++|+++. .+.+..+
T Consensus 3 ~~l~~~~itK~f~----~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~ 78 (501)
T COG3845 3 PALEMRGITKRFP----GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIR 78 (501)
T ss_pred ceEEEeccEEEcC----CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHH
Confidence 3689999999997 678999999999999999999999999999999999999999999999999874 4566788
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHh---cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRV---RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~---~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
..||+|+|++.+++.+||.||+.++... .........+++.++.+++||.-..+.++.+||-||||||.|.+||..+
T Consensus 79 ~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 79 LGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred cCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999999999999999887532 1234556778899999999999889999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
|++|||||||+-|-|...+.+++.++.++++|+|||+|||-++|+.++|||+-||..|+++...+
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~ 223 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD 223 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec
Confidence 99999999999999999999999999999999999999999999999999999999999877665
No 271
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-43 Score=351.79 Aligned_cols=214 Identities=23% Similarity=0.424 Sum_probs=178.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+. .+.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. ....+++.+
T Consensus 1 l~~~~l~~~~~~---~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i 77 (236)
T cd03253 1 IEFENVTFAYDP---GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAI 77 (236)
T ss_pred CEEEEEEEEeCC---CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhE
Confidence 468899999952 3569999999999999999999999999999999999999999999999988754 334456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHH-----HHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNT-----IVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
+|++|++.+++ .|+.||+.+... ......... .+.+.++.+ ++....++++.+|||||||||+|||||+.
T Consensus 78 ~~~~q~~~~~~-~tv~~nl~~~~~--~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~ 154 (236)
T cd03253 78 GVVPQDTVLFN-DTIGYNIRYGRP--DATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILK 154 (236)
T ss_pred EEECCCChhhc-chHHHHHhhcCC--CCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999998875 699999976432 111111111 122333443 44555677889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|++|||||||+|||+.++..+.++|.++++ |.|||++||+.+++.. ||++++|++|+++..|+.+++
T Consensus 155 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~~~-~d~~~~l~~g~i~~~~~~~~~ 222 (236)
T cd03253 155 NPPILLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLSTIVN-ADKIIVLKDGRIVERGTHEEL 222 (236)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHHHh-CCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999999999999999876 8999999999999975 999999999999999887665
No 272
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.9e-43 Score=339.23 Aligned_cols=187 Identities=33% Similarity=0.524 Sum_probs=166.6
Q ss_pred eEEEeeeEEEeCCcC--CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC--CCCccEEEEcCccCCCchHHh
Q psy7366 342 VLVVKRLFKIYANSK--GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI--KPTSGNAYVMNHSIRDSMDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~--~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~--~~~~G~i~~~g~~~~~~~~~~ 417 (566)
.++++|+++.|+... ..+++|+++||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++.. ...
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~--~~~ 80 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK--RSF 80 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch--Hhh
Confidence 488999999996210 0257999999999999999999999999999999999999 9999999999998754 245
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++.++|+||++.+++.+|+.||+.+.... .+|||||+||++|||||+.+|+
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~~~i~~~~~~-----------------------------~~LS~G~~qrv~laral~~~p~ 131 (194)
T cd03213 81 RKIIGYVPQDDILHPTLTVRETLMFAAKL-----------------------------RGLSGGERKRVSIALELVSNPS 131 (194)
T ss_pred hheEEEccCcccCCCCCcHHHHHHHHHHh-----------------------------ccCCHHHHHHHHHHHHHHcCCC
Confidence 67899999999999999999999754210 0899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHH-HHHhhCCEEEEEECCEEEEec
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME-ECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~-~~~~~~drv~~l~~G~i~~~g 559 (566)
+|||||||+|||+.+++.+.++|+++.++|.|||++|||++ ++..+||++++|++|++++.|
T Consensus 132 illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 132 LLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999998777999999999996 788899999999999998754
No 273
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=336.42 Aligned_cols=174 Identities=32% Similarity=0.525 Sum_probs=160.3
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc---hHHhcC
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS---MDLVRS 419 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~---~~~~~~ 419 (566)
++++|+++.|+ ++++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....++
T Consensus 1 i~~~~l~~~~~----~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (178)
T cd03229 1 LELKNVSKRYG----QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRR 76 (178)
T ss_pred CEEEEEEEEEC----CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhh
Confidence 46899999996 45799999999999999999999999999999999999999999999999887542 345567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
.++|++|++.+++.+|+.||+.+. ||||||||++|||||+.+|+++
T Consensus 77 ~i~~~~q~~~~~~~~t~~~~l~~~----------------------------------lS~G~~qr~~la~al~~~p~ll 122 (178)
T cd03229 77 RIGMVFQDFALFPHLTVLENIALG----------------------------------LSGGQQQRVALARALAMDPDVL 122 (178)
T ss_pred cEEEEecCCccCCCCCHHHheeec----------------------------------CCHHHHHHHHHHHHHHCCCCEE
Confidence 899999999988889999987542 9999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
||||||+|||+.++..+.++|++++++ |.|+|++|||++++..+||++++|++|+
T Consensus 123 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 123 LLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 999999999999999999999999887 8999999999999999999999999884
No 274
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-43 Score=338.33 Aligned_cols=187 Identities=28% Similarity=0.410 Sum_probs=165.6
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC--CCCccEEEEcCccCCCchHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI--KPTSGNAYVMNHSIRDSMDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~--~~~~G~i~~~g~~~~~~~~~~~ 418 (566)
..++++|+++.|+...+++++|+++||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|+++. ...+
T Consensus 2 ~~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~---~~~~ 78 (192)
T cd03232 2 SVLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD---KNFQ 78 (192)
T ss_pred cEEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH---HHhh
Confidence 36899999999963211256999999999999999999999999999999999986 489999999998874 3445
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
+.++|++|++.+++.+|++||+.+.... . +|||||+||++|||||+.+|++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~----------------~-------------~LSgGe~qrv~la~al~~~p~v 129 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSALL----------------R-------------GLSVEQRKRLTIGVELAAKPSI 129 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHHHH----------------h-------------cCCHHHhHHHHHHHHHhcCCcE
Confidence 6899999999889999999999764210 0 8999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHH-HHHhhCCEEEEEEC-CEEEEec
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME-ECEALCTKLTIMVN-GQFTCLG 559 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~-~~~~~~drv~~l~~-G~i~~~g 559 (566)
|||||||+|||+.++..+++.|+++++.|.|||++||+++ ++..+||++++|++ |++++.|
T Consensus 130 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 130 LFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999998777999999999998 47889999999999 9998765
No 275
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.4e-44 Score=358.82 Aligned_cols=210 Identities=24% Similarity=0.381 Sum_probs=184.4
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
|+++|+++.|.. +...+|+|+||+|++||+++|+||||||||||+++|+|+++ ++|+|+++|.++.. ....+++++
T Consensus 3 i~~~nls~~~~~--~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 3 MTVKDLTAKYTE--GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred EEEEEEEEEeCC--CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 789999999952 14569999999999999999999999999999999999998 78999999998854 344567889
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCc-----------CChhHHHHHHHHH
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRT-----------LSGGNKRKLSTAI 490 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----------LSgGqkqrv~la~ 490 (566)
+|+||++.+|+. |+++|+..+. ... .+.+.++++.+++.+..++.+.. ||||||||++|||
T Consensus 80 ~~v~q~~~lf~~-tv~~nl~~~~---~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaR 151 (275)
T cd03289 80 GVIPQKVFIFSG-TFRKNLDPYG---KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLAR 151 (275)
T ss_pred EEECCCcccchh-hHHHHhhhcc---CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHH
Confidence 999999999875 9999996431 111 23467788899998777777776 9999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||+.+|+||||||||++||+.++..+.+.|+++. +++|||+|||+++++.. |||+++|++|++++.|+++++.
T Consensus 152 all~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~~i~~-~dri~vl~~G~i~~~g~~~~l~ 224 (275)
T cd03289 152 SVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIEAMLE-CQRFLVIEENKVRQYDSIQKLL 224 (275)
T ss_pred HHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHHHHHh-CCEEEEecCCeEeecCCHHHHh
Confidence 9999999999999999999999999999999864 48999999999999875 9999999999999999998864
No 276
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.4e-43 Score=341.37 Aligned_cols=197 Identities=25% Similarity=0.405 Sum_probs=173.6
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.......++.++
T Consensus 1 l~~~~l~~~~~----~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 76 (198)
T TIGR01189 1 LAARNLACSRG----ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNIL 76 (198)
T ss_pred CEEEEEEEEEC----CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccchHHhhhheE
Confidence 46899999996 46799999999999999999999999999999999999999999999999987543344567899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|++|++.+++.+|+.||+.+...... . . .+.+.++++.+++.+..++++.+||||||||++||||++.+|+++|||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~--~-~-~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 152 (198)
T TIGR01189 77 YLGHLPGLKPELSALENLHFWAAIHG--G-A-QRTIEDALAAVGLTGFEDLPAAQLSAGQQRRLALARLWLSRAPLWILD 152 (198)
T ss_pred EeccCcccccCCcHHHHHHHHHHHcC--C-c-HHHHHHHHHHcCCHHHhcCChhhcCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999888888999999987654332 1 1 345788999999998889999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEE
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTI 549 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~ 549 (566)
|||+|||+.++..++++|.+++++|.|||++||+...+ .|++++.
T Consensus 153 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~--~~~~~~~ 197 (198)
T TIGR01189 153 EPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL--VEARELR 197 (198)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc--cceEEee
Confidence 99999999999999999999877799999999998654 4687764
No 277
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.9e-43 Score=342.85 Aligned_cols=199 Identities=26% Similarity=0.366 Sum_probs=177.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... . .++.+
T Consensus 2 ~l~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~-~-~~~~~ 75 (207)
T PRK13539 2 MLEGEDLACVRG----GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDP-D-VAEAC 75 (207)
T ss_pred EEEEEeEEEEEC----CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcch-h-hHhhc
Confidence 588999999996 45699999999999999999999999999999999999999999999999876421 2 56789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|++|++.+++.+|+.||+.+.....+.. .+.+.++++.+++.+..++++.+||||||||++|||||+.+|++|||
T Consensus 76 ~~~~~~~~~~~~~tv~~~l~~~~~~~~~~----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llll 151 (207)
T PRK13539 76 HYLGHRNAMKPALTVAENLEFWAAFLGGE----ELDIAAALEAVGLAPLAHLPFGYLSAGQKRRVALARLLVSNRPIWIL 151 (207)
T ss_pred EEecCCCcCCCCCcHHHHHHHHHHhcCCc----HHHHHHHHHHcCCHHHHcCChhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999888888899999998765433221 23478899999998878999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEEC
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVN 552 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~ 552 (566)
||||+|||+.+++.+++.|++++++|.|||++||+++++.. |+++.+..
T Consensus 152 DEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~--~~~~~~~~ 200 (207)
T PRK13539 152 DEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG--ARELDLGP 200 (207)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc--CcEEeecC
Confidence 99999999999999999999987779999999999999986 99988754
No 278
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-43 Score=359.36 Aligned_cols=218 Identities=23% Similarity=0.325 Sum_probs=187.4
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC-----CCccEEEEcCccCCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK-----PTSGNAYVMNHSIRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~-----~~~G~i~~~g~~~~~--- 412 (566)
.+|.++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 44 ~~l~i~nl~~~~~----~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 44 AKLSVEDLDVYYG----DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred ceEEEEEEEEEeC----CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 4799999999996 4679999999999999999999999999999999999986 689999999988753
Q ss_pred chHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhc------------CCC-chHHHHHHHHHHHHcCCC----CccccCc
Q psy7366 413 SMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVR------------NVP-SVLLNTIVNESLNKFALG----HYSDREV 475 (566)
Q Consensus 413 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~------------~~~-~~~~~~~~~~~l~~~~l~----~~~~~~~ 475 (566)
.....+++++|+||++.+++ .|++||+.+..... +.. .......+.++++.+++. +..++++
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 198 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVNDRLDDNA 198 (305)
T ss_pred cHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhHHhcCcc
Confidence 12345678999999998887 49999998754321 111 122345678889999874 4568889
Q ss_pred CcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEE-EEEECCE
Q psy7366 476 RTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKL-TIMVNGQ 554 (566)
Q Consensus 476 ~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv-~~l~~G~ 554 (566)
.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++++ +.|||++|||++++..+||++ ++|++|+
T Consensus 199 ~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~~i~~~~d~i~~~l~~G~ 277 (305)
T PRK14264 199 LGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQQAARISDQTAVFLTGGE 277 (305)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHHHHHHhcCEEEEEecCCE
Confidence 99999999999999999999999999999999999999999999999876 489999999999999999997 5789999
Q ss_pred EEEecCcccc
Q psy7366 555 FTCLGSATHL 564 (566)
Q Consensus 555 i~~~g~~~~l 564 (566)
+++.|+++++
T Consensus 278 i~~~g~~~~~ 287 (305)
T PRK14264 278 LVEYDDTDKI 287 (305)
T ss_pred EEEeCCHHHH
Confidence 9999988765
No 279
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.3e-43 Score=340.48 Aligned_cols=197 Identities=27% Similarity=0.337 Sum_probs=175.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+|.++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|+++|+++.......++++
T Consensus 1 ml~~~~l~~~~~----~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~i 76 (200)
T PRK13540 1 MLDVIELDFDYH----DQPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKKDLCTYQKQL 76 (200)
T ss_pred CEEEEEEEEEeC----CeeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCccccCHHHHHhhe
Confidence 378999999996 4579999999999999999999999999999999999999999999999998764334556789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|++|++.+++.+|+.+|+.+..... . ....+.++++.+++.+..++++.+|||||+||++||||++.+|++|||
T Consensus 77 ~~~~q~~~~~~~~tv~~~~~~~~~~~---~--~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~lil 151 (200)
T PRK13540 77 CFVGHRSGINPYLTLRENCLYDIHFS---P--GAVGITELCRLFSLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLWLL 151 (200)
T ss_pred EEeccccccCcCCCHHHHHHHHHhcC---c--chHHHHHHHHHcCCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999998888899999998753221 1 124678899999998778899999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEE
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLT 548 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~ 548 (566)
||||+|||+.+++.+.+.|++++++|.|||++||+.+.+.. ||.-.
T Consensus 152 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~-~d~~~ 197 (200)
T PRK13540 152 DEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNK-ADYEE 197 (200)
T ss_pred eCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccc-cchhh
Confidence 99999999999999999999987779999999999998866 88654
No 280
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.2e-43 Score=387.86 Aligned_cols=211 Identities=20% Similarity=0.268 Sum_probs=185.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
+|+++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+|+|+|+++|++|+|.++|.++.. .....++.
T Consensus 3 ~l~~~~l~~~~~----~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~ 78 (490)
T PRK10938 3 SLQISQGTFRLS----DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKL 78 (490)
T ss_pred eEEEEeEEEEcC----CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHH
Confidence 589999999996 4569999999999999999999999999999999999999999999999987643 22334567
Q ss_pred eEEEecCCCC--C------CCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHH
Q psy7366 421 IGYCPQFDAL--N------DRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 421 i~~v~q~~~l--~------~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al 492 (566)
++|++|++.+ + ..+|+.+|+.+. ....+++.++++.+++.+..++++.+|||||||||+||+||
T Consensus 79 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 79 VSDEWQRNNTDMLSPGEDDTGRTTAEIIQDE--------VKDPARCEQLAQQFGITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred hceeccCcchhhcccchhhccccHHHhcccc--------hhHHHHHHHHHHHcCCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 9999998642 1 146888876432 12345678999999998888999999999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+.+|++|||||||+|||+.+++.++++|++++++|.|||++|||++++..+||++++|++|+++..|+++++
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 222 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEI 222 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999987799999999999999999999999999999999887654
No 281
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.2e-43 Score=346.02 Aligned_cols=206 Identities=23% Similarity=0.366 Sum_probs=175.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+. +.+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++.+
T Consensus 3 l~~~~l~~~~~~--~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 3 IEFKNVSLRYRP--NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred EEEEEEEEecCC--CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 789999999963 13579999999999999999999999999999999999999999999999988754 334456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-----------cccCcCcCChhHHHHHHHHH
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-----------SDREVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGqkqrv~la~ 490 (566)
+|+||++.+++ .|+.||+.+... .. ...+.+.++.+++.+. .++++.+||+||+||++|||
T Consensus 81 ~~~~q~~~l~~-~tv~enl~~~~~---~~----~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~lar 152 (221)
T cd03244 81 SIIPQDPVLFS-GTIRSNLDPFGE---YS----DEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLAR 152 (221)
T ss_pred EEECCCCcccc-chHHHHhCcCCC---CC----HHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHH
Confidence 99999998776 599999864321 11 1234455555555432 35689999999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
||+.+|+++||||||+|||+.+++.++++|+++.+ +.|||++||+++++.. ||++++|++|++++.|+
T Consensus 153 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 153 ALLRKSKILVLDEATASVDPETDALIQKTIREAFK-DCTVLTIAHRLDTIID-SDRILVLDKGRVVEFDS 220 (221)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHHHhh-CCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999854 6899999999999976 99999999999998875
No 282
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.2e-43 Score=348.95 Aligned_cols=212 Identities=18% Similarity=0.320 Sum_probs=178.1
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhc
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVR 418 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~ 418 (566)
..+++++|+++.|+... +..+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .....+
T Consensus 9 ~~~l~~~~l~~~~~~~~-~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 9 KGIVKFQNVTFAYPTRP-DTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred CceEEEEEEEEEeCCCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45799999999996311 2469999999999999999999999999999999999999999999999988753 233456
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCc---hHHHHHHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHc
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPS---VLLNTIVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~---~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
+.++|++|++.+++ .|+.||+.+......... ......+.++++.+ ++....++++.+|||||||||+|||||+
T Consensus 88 ~~i~~~~q~~~l~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 88 SKVSLVGQEPVLFA-RSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred hhEEEEecccHHHh-hhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 78999999998776 599999976432111000 00112246778888 7887789999999999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
.+|++|||||||+|||+.+++.+.+.|+++.+ +.|||++|||++++.. ||++++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~-~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLSTVER-ADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHHHHHh-CCEEEEecCCcC
Confidence 99999999999999999999999999999865 6899999999999965 999999999974
No 283
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=4.1e-43 Score=333.62 Aligned_cols=175 Identities=34% Similarity=0.520 Sum_probs=159.8
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~~ 418 (566)
++++++|+++.| +|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ....+
T Consensus 3 ~~l~~~~l~~~~--------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (182)
T cd03215 3 PVLEVRGLSVKG--------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIR 74 (182)
T ss_pred cEEEEeccEEEe--------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHh
Confidence 368999999876 79999999999999999999999999999999999999999999999987642 23456
Q ss_pred CceEEEecCC---CCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCC
Q psy7366 419 SYIGYCPQFD---ALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 419 ~~i~~v~q~~---~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~ 495 (566)
++++|+||++ .+++.+|++||+.+... ||+|||||++|||||+.+
T Consensus 75 ~~i~~~~q~~~~~~~~~~~t~~e~l~~~~~--------------------------------LS~G~~qrl~la~al~~~ 122 (182)
T cd03215 75 AGIAYVPEDRKREGLVLDLSVAENIALSSL--------------------------------LSGGNQQKVVLARWLARD 122 (182)
T ss_pred CCeEEecCCcccCcccCCCcHHHHHHHHhh--------------------------------cCHHHHHHHHHHHHHccC
Confidence 7899999985 57888999999875421 999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
|++|||||||+|||+.+++.+.++|+++.++|.|+|++||+++++..+||++++|++|++
T Consensus 123 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 123 PRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999977789999999999999999999999999974
No 284
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=3.3e-43 Score=331.54 Aligned_cols=172 Identities=30% Similarity=0.518 Sum_probs=156.1
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+. +.+.+++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++++
T Consensus 1 i~~~~l~~~~~~--~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (173)
T cd03246 1 LEVENVSFRYPG--AEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHV 78 (173)
T ss_pred CEEEEEEEEcCC--CCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhhe
Confidence 468999999962 12469999999999999999999999999999999999999999999999998754 334456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|++|++.+++. |++||+ ||||||||++|||||+.+|++|||
T Consensus 79 ~~~~q~~~~~~~-tv~~~l-------------------------------------LS~G~~qrv~la~al~~~p~~lll 120 (173)
T cd03246 79 GYLPQDDELFSG-SIAENI-------------------------------------LSGGQRQRLGLARALYGNPRILVL 120 (173)
T ss_pred EEECCCCccccC-cHHHHC-------------------------------------cCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999988874 999886 999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEE
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQF 555 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i 555 (566)
||||+|||+.++..++++|++++++|.|||++|||++++. +||++++|++|++
T Consensus 121 DEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~-~~d~v~~l~~G~i 173 (173)
T cd03246 121 DEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLA-SADRILVLEDGRV 173 (173)
T ss_pred ECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-hCCEEEEEECCCC
Confidence 9999999999999999999999777999999999999884 7999999999974
No 285
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.7e-43 Score=339.58 Aligned_cols=202 Identities=24% Similarity=0.335 Sum_probs=172.9
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
..++++|+++.|+.. .+.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 5 ~~l~~~~l~~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 5 GEIEVENLSVRYAPD--LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CeEEEEEEEEEeCCC--CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 458999999999631 2469999999999999999999999999999999999999999999999998743 2334567
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEE
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLI 499 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ll 499 (566)
.++|+||++.+++ .|+.||+.+.. ... ...+.+.++ .++++.+|||||+||++|||||+.+|++|
T Consensus 83 ~i~~v~q~~~~~~-~tv~~~l~~~~---~~~----~~~~~~~l~-------~~~~~~~LS~G~~qrv~laral~~~p~ll 147 (207)
T cd03369 83 SLTIIPQDPTLFS-GTIRSNLDPFD---EYS----DEEIYGALR-------VSEGGLNLSQGQRQLLCLARALLKRPRVL 147 (207)
T ss_pred hEEEEecCCcccC-ccHHHHhcccC---CCC----HHHHHHHhh-------ccCCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 8999999998877 49999996532 111 122333343 36789999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCc
Q psy7366 500 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSA 561 (566)
Q Consensus 500 lLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~ 561 (566)
||||||+|||+.++..++++|+++. +|.|+|++||+++++.. ||++++|++|++++.|++
T Consensus 148 llDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~th~~~~~~~-~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 148 VLDEATASIDYATDALIQKTIREEF-TNSTILTIAHRLRTIID-YDKILVMDAGEVKEYDHP 207 (207)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhh-CCEEEEEECCEEEecCCC
Confidence 9999999999999999999999985 48999999999999976 999999999999988764
No 286
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.3e-43 Score=332.28 Aligned_cols=178 Identities=30% Similarity=0.494 Sum_probs=159.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.......++.++
T Consensus 1 i~~~~~~~~~~~~--~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ--EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC--CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEE
Confidence 4688999999621 13699999999999999999999999999999999999999999999999876432334567899
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+||++.+++ .|++||+ +.+|||||+||++|||||+.+|++||||
T Consensus 79 ~~~q~~~~~~-~tv~~~i----------------------------------~~~LS~G~~qrv~laral~~~p~~lllD 123 (178)
T cd03247 79 VLNQRPYLFD-TTLRNNL----------------------------------GRRFSGGERQRLALARILLQDAPIVLLD 123 (178)
T ss_pred EEccCCeeec-ccHHHhh----------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999988776 6998886 7789999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.+++.+++.|+++. ++.|||++||+++++. .||++++|++|++++.|
T Consensus 124 EP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~~~-~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 124 EPTVGLDPITERQLLSLIFEVL-KDKTLIWITHHLTGIE-HMDKILFLENGKIIMQG 178 (178)
T ss_pred CCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-hCCEEEEEECCEEEecC
Confidence 9999999999999999999985 5899999999999986 69999999999998754
No 287
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2.8e-43 Score=334.16 Aligned_cols=178 Identities=31% Similarity=0.564 Sum_probs=160.7
Q ss_pred EEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCceE
Q psy7366 344 VVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYIG 422 (566)
Q Consensus 344 ~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i~ 422 (566)
+++|+++.|+ ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....++..++
T Consensus 1 ~~~~l~~~~~----~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 76 (180)
T cd03214 1 EVENLSVGYG----GRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIA 76 (180)
T ss_pred CeeEEEEEEC----CeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHh
Confidence 3689999996 3579999999999999999999999999999999999999999999999988754 2334455688
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+|| +++.+++.+..++++.+||||||||++|||||+.+|+++|||
T Consensus 77 ~~~q----------------------------------~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllD 122 (180)
T cd03214 77 YVPQ----------------------------------ALELLGLAHLADRPFNELSGGERQRVLLARALAQEPPILLLD 122 (180)
T ss_pred HHHH----------------------------------HHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8887 667778877778899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|||+|||+.+++.+.++|.+++++ +.|+|++||+++++..+||++++|++|+++..|
T Consensus 123 EP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 123 EPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999776 899999999999999999999999999997653
No 288
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3.4e-43 Score=336.53 Aligned_cols=182 Identities=26% Similarity=0.426 Sum_probs=158.7
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC---chHHhcCceEEEecCCC-CCCC
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD---SMDLVRSYIGYCPQFDA-LNDR 433 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~---~~~~~~~~i~~v~q~~~-l~~~ 433 (566)
++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++.++|+||++. .+..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 83 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFA 83 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhcccc
Confidence 4679999999999999999999999999999999999999999999999988742 12345678999999973 2334
Q ss_pred CCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHH
Q psy7366 434 LTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGAR 513 (566)
Q Consensus 434 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~ 513 (566)
.|+.||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++|||||||+|||+.++
T Consensus 84 ~tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~ 163 (190)
T TIGR01166 84 ADVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRERPTHCLSGGEKKRVAIAGAVAMRPDVLLLDEPTAGLDPAGR 163 (190)
T ss_pred ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHH
Confidence 79999998764433333334455678999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEccCHHH
Q psy7366 514 RFLWTCIERAVSEGRCVILTSHNMEE 539 (566)
Q Consensus 514 ~~l~~~l~~~~~~g~tvl~vsHd~~~ 539 (566)
+.+.++|++++++|.|||++|||+++
T Consensus 164 ~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 164 EQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred HHHHHHHHHHHHcCCEEEEEeecccc
Confidence 99999999998779999999999875
No 289
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.2e-42 Score=335.43 Aligned_cols=185 Identities=25% Similarity=0.360 Sum_probs=164.5
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCC--CCCCccEEEEcCccCCCc-h-HHhc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGA--IKPTSGNAYVMNHSIRDS-M-DLVR 418 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~--~~~~~G~i~~~g~~~~~~-~-~~~~ 418 (566)
++++|+++.|+ ++.+|+|+||++.+||+++|+||||||||||+++|+|+ ++|++|+|.++|+++... . ...+
T Consensus 1 l~~~~l~~~~~----~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (200)
T cd03217 1 LEIKDLHVSVG----GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERAR 76 (200)
T ss_pred CeEEEEEEEeC----CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhh
Confidence 46899999996 45799999999999999999999999999999999999 579999999999988652 2 2234
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
..++|+||++.+++..++.+++ ++.+.+|||||+||++|||||+.+|++
T Consensus 77 ~~i~~v~q~~~~~~~~~~~~~l-------------------------------~~~~~~LS~G~~qrv~laral~~~p~i 125 (200)
T cd03217 77 LGIFLAFQYPPEIPGVKNADFL-------------------------------RYVNEGFSGGEKKRNEILQLLLLEPDL 125 (200)
T ss_pred CcEEEeecChhhccCccHHHHH-------------------------------hhccccCCHHHHHHHHHHHHHhcCCCE
Confidence 5699999999888888887765 122368999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHh-hCCEEEEEECCEEEEecCcc
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA-LCTKLTIMVNGQFTCLGSAT 562 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~-~~drv~~l~~G~i~~~g~~~ 562 (566)
|||||||+|||+.++..++++|.+++++|.|||++||+++++.. +||++++|++|++++.|+.+
T Consensus 126 lllDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~~~~ 190 (200)
T cd03217 126 AILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSGDKE 190 (200)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEccHH
Confidence 99999999999999999999999997778999999999999988 79999999999999998543
No 290
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=368.00 Aligned_cols=211 Identities=26% Similarity=0.388 Sum_probs=184.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.++.++|+++.|+... .+.+|+++||+|.+|+++||+||||||||||+++|+|+++|++|+|.++|.+.
T Consensus 20 ~mL~lknL~~~~~~~~-~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~---------- 88 (549)
T PRK13545 20 PFDKLKDLFFRSKDGE-YHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA---------- 88 (549)
T ss_pred ceeEEEEEEEecCCCc-cceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee----------
Confidence 3689999999886321 24699999999999999999999999999999999999999999999999641
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
++.+.+.+++.+|+.||+.+.....+.......+.+.++++.+++.+..++++.+||||||||++|||||+.+|++||
T Consensus 89 --~i~~~~~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~ld~~~~~LSGGQrQRVaLArAL~~~P~LLL 166 (549)
T PRK13545 89 --LIAISSGLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFIYQPVKTYSSGMKSRLGFAISVHINPDILV 166 (549)
T ss_pred --eEEeccccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHhhCCcccCCHHHHHHHHHHHHHHhCCCEEE
Confidence 222344566778999999875443344444445567789999999988899999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+|||+.++..+++.|++++++|.|||++|||++++..+||++++|++|++++.|+++++
T Consensus 167 LDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv~~G~~~el 230 (549)
T PRK13545 167 IDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVKEYGDIKEV 230 (549)
T ss_pred EECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999877799999999999999999999999999999999988765
No 291
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=340.54 Aligned_cols=195 Identities=25% Similarity=0.415 Sum_probs=178.2
Q ss_pred eeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-----hHHhcCceEEEecCCCCCCCCCHHH
Q psy7366 364 QISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-----MDLVRSYIGYCPQFDALNDRLTPRE 438 (566)
Q Consensus 364 ~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-----~~~~~~~i~~v~q~~~l~~~~tv~e 438 (566)
+++|+.+.-.+++|.|++|||||||+|+|+|+.+|+.|.|.++|+.+... ....+++|||||||..+||.+||+.
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPdeG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrg 95 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPDEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRG 95 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCccccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEec
Confidence 68888888689999999999999999999999999999999999876431 2334678999999999999999999
Q ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHH
Q psy7366 439 HLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWT 518 (566)
Q Consensus 439 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~ 518 (566)
|+.|+.... ....++++.+.+|++++++++|.+|||||||||+|+|||+..|++||||||.++||..-+.+++-
T Consensus 96 NL~YG~~~~------~~~~fd~iv~lLGI~hLL~R~P~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~Eilp 169 (352)
T COG4148 96 NLRYGMWKS------MRAQFDQLVALLGIEHLLDRYPGTLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILP 169 (352)
T ss_pred chhhhhccc------chHhHHHHHHHhCcHHHHhhCCCccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHH
Confidence 999875422 23457889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 519 CIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 519 ~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.|+++.++ ...|++|||.++|+.++||+|++|++|++.+.|..+++
T Consensus 170 ylERL~~e~~IPIlYVSHS~~Ev~RLAd~vV~le~GkV~A~g~~e~v 216 (352)
T COG4148 170 YLERLRDEINIPILYVSHSLDEVLRLADRVVVLENGKVKASGPLEEV 216 (352)
T ss_pred HHHHHHHhcCCCEEEEecCHHHHHhhhheEEEecCCeEEecCcHHHH
Confidence 99999887 89999999999999999999999999999999998775
No 292
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-42 Score=348.60 Aligned_cols=216 Identities=17% Similarity=0.237 Sum_probs=180.4
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
..++++|+++.|+.. .+.+|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .....++
T Consensus 18 ~~i~~~~l~~~~~~~--~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 18 GEIKIHDLCVRYENN--LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred ceEEEEEEEEEeCCC--CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 469999999999631 2569999999999999999999999999999999999999999999999998754 3345577
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHH-----HHHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHH
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLN-----TIVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al 492 (566)
.++|++|++.+++. |+.||+..... ....... ..+.+.++.+ +++...+.++.+||+||+||++|||||
T Consensus 96 ~i~~v~q~~~l~~~-tv~~nl~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral 171 (257)
T cd03288 96 RLSIILQDPILFSG-SIRFNLDPECK---CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAF 171 (257)
T ss_pred hEEEECCCCccccc-HHHHhcCcCCC---CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHH
Confidence 89999999988764 99999853211 1111111 1123444544 566666778899999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+.+|++|||||||+|||+.++..++++++++. ++.|||++||+++++.. |||+++|++|++++.|+++++
T Consensus 172 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~~~~~-~dri~~l~~G~i~~~g~~~~~ 241 (257)
T cd03288 172 VRKSSILIMDEATASIDMATENILQKVVMTAF-ADRTVVTIAHRVSTILD-ADLVLVLSRGILVECDTPENL 241 (257)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHhc-CCCEEEEEecChHHHHh-CCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999874 48999999999999986 999999999999999988765
No 293
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=2.1e-42 Score=339.35 Aligned_cols=194 Identities=29% Similarity=0.475 Sum_probs=169.5
Q ss_pred EEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCC--CCCCHHHHHHHHH
Q psy7366 367 FGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALN--DRLTPREHLEFYS 444 (566)
Q Consensus 367 l~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~--~~~tv~e~l~~~~ 444 (566)
|+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. ..+++++|+||++.++ ..+|+.+|+.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG----KGWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch----HhhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 578999999999999999999999999999999999999998753 2356799999998763 3479999997642
Q ss_pred Hh----cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHH
Q psy7366 445 RV----RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCI 520 (566)
Q Consensus 445 ~~----~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l 520 (566)
.. ...+.......+.++++.+++.+..++++.+||||||||++|||||+.+|++|||||||+|||+.+++.+.+.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~l~~~l 156 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPVGELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQELLTELF 156 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 11 11122233456888999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 521 ERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 521 ~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++++++|.|||++|||++++..+||++++| +|+++..|+++++.
T Consensus 157 ~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~ 200 (223)
T TIGR03771 157 IELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQ 200 (223)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhc
Confidence 999877999999999999999999999999 89999999887764
No 294
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-42 Score=366.79 Aligned_cols=212 Identities=26% Similarity=0.446 Sum_probs=184.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++.+|+++.|++ ++++++|+||++++|+.++|+|+||||||||+++|+|+.+|++|+|.+||.+... ....++++
T Consensus 320 ei~~~~l~~~y~~---g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 320 EISLENLSFRYPD---GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred eeeecceEEecCC---CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 3455699999984 4489999999999999999999999999999999999999999999999999876 56678999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCcc------ccCcC----cCChhHHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYS------DREVR----TLSGGNKRKLSTAI 490 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~LSgGqkqrv~la~ 490 (566)
++||+|+|.+|+. |++||+.++.. . ..++.+.++++..++.++. |..++ .|||||+|||++||
T Consensus 397 i~~v~Q~p~lf~g-TireNi~l~~~-----~-~s~e~i~~al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLAR 469 (559)
T COG4988 397 ISWVSQNPYLFAG-TIRENILLARP-----D-ASDEEIIAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALAR 469 (559)
T ss_pred eeeeCCCCccccc-cHHHHhhccCC-----c-CCHHHHHHHHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHH
Confidence 9999999999987 99999987532 1 1234466777777664432 33444 49999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||+.+++++|+||||++||.++.+.+.+.|.++.++ +|||++||++..+.. ||+|++|++|++++.|+++++.
T Consensus 470 All~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~-ktvl~itHrl~~~~~-~D~I~vld~G~l~~~g~~~~L~ 542 (559)
T COG4988 470 ALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQ-KTVLVITHRLEDAAD-ADRIVVLDNGRLVEQGTHEELS 542 (559)
T ss_pred HhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhC-CeEEEEEcChHHHhc-CCEEEEecCCceeccCCHHHHh
Confidence 999999999999999999999999999999998775 999999999999887 8999999999999999998873
No 295
>KOG0058|consensus
Probab=100.00 E-value=9.3e-43 Score=373.63 Aligned_cols=219 Identities=25% Similarity=0.425 Sum_probs=187.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
..++++|+++.|+.++ +.++|+|+||+|+|||++||+||||+||||+.++|..+|.|++|+|.+||.+++. +...+|+
T Consensus 464 G~IeF~~VsFaYP~Rp-~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~ 542 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTRP-DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRR 542 (716)
T ss_pred ceEEEEEeeeecCCCC-CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHH
Confidence 4699999999999654 5679999999999999999999999999999999999999999999999999987 5677889
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHH-----HHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHH
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI-----VNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al 492 (566)
+||+|.|+|.+|.. ||.|||.|+.. ....++.... +.+.+..| |.+.....+..+||||||||++|||||
T Consensus 543 ~Ig~V~QEPvLFs~-sI~eNI~YG~~--~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARAL 619 (716)
T KOG0058|consen 543 KIGLVGQEPVLFSG-SIRENIAYGLD--NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARAL 619 (716)
T ss_pred Heeeeeccceeecc-cHHHHHhcCCC--CCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHHH
Confidence 99999999999986 99999998654 2223222221 22222222 122234456679999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++||.||||||.||+||.++...+.+.|.++.+ ++|||+|.|.+..++. ||+|+++++|++++.|+.+++.
T Consensus 620 lr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLSTV~~-Ad~Ivvi~~G~V~E~G~h~eLl 690 (716)
T KOG0058|consen 620 LRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLSTVRH-ADQIVVIDKGRVVEMGTHDELL 690 (716)
T ss_pred hcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhhHhhh-ccEEEEEcCCeEEecccHHHHh
Confidence 999999999999999999999999999988755 5999999999999986 9999999999999999998875
No 296
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.7e-43 Score=315.43 Aligned_cols=197 Identities=27% Similarity=0.401 Sum_probs=181.2
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCceEEEecCCCCCCCCCH
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYIGYCPQFDALNDRLTP 436 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i~~v~q~~~l~~~~tv 436 (566)
+.++|+++||++.+||.++|+||+|||||||+|+++-+++|++|+++|.|++++. .+..+|.+|+||.|.|.+|++ ||
T Consensus 15 ~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~-tV 93 (223)
T COG4619 15 DAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGD-TV 93 (223)
T ss_pred CCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccccc-ch
Confidence 6779999999999999999999999999999999999999999999999999976 577889999999999999987 99
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHH
Q psy7366 437 REHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRF 515 (566)
Q Consensus 437 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~ 515 (566)
++|+.|+..++.... +...+..+++++++. ..+++++.+||||||||++|+|-|..-|+|||||||||+||+.+++.
T Consensus 94 eDNlifP~~~r~rr~--dr~aa~~llar~~l~~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsALD~~nkr~ 171 (223)
T COG4619 94 EDNLIFPWQIRNRRP--DRAAALDLLARFALPDSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEITSALDESNKRN 171 (223)
T ss_pred hhccccchHHhccCC--ChHHHHHHHHHcCCchhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCchhhcChhhHHH
Confidence 999999887664322 356688999999997 47899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH-hCCcEEEEEccCHHHHHhhCCEEEEEECCEEEE
Q psy7366 516 LWTCIERAV-SEGRCVILTSHNMEECEALCTKLTIMVNGQFTC 557 (566)
Q Consensus 516 l~~~l~~~~-~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~ 557 (566)
+.++|.++. ++..++++||||.+++.+.+|+++-+..|++-+
T Consensus 172 ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 172 IEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred HHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 999999987 568999999999999999999999999998644
No 297
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.6e-43 Score=388.38 Aligned_cols=214 Identities=24% Similarity=0.401 Sum_probs=183.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
..++++|+++.|+. .+..+|+|+||+|++||.+||+|+||||||||+|+|.|+++|++|+|.+||.++.. ....+|+
T Consensus 470 g~I~~~nvsf~y~~--~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~ 547 (709)
T COG2274 470 GEIEFENVSFRYGP--DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRR 547 (709)
T ss_pred ceEEEEEEEEEeCC--CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHh
Confidence 35899999999974 23469999999999999999999999999999999999999999999999999976 5677899
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCC-----------CCccccCcCcCChhHHHHHHH
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFAL-----------GHYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgGqkqrv~l 488 (566)
+||||+|++.+|.+ |++||+.+.... .+. +.+.+++...|. +.........||||||||++|
T Consensus 548 ~ig~V~Q~~~Lf~g-SI~eNi~l~~p~--~~~----e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlal 620 (709)
T COG2274 548 QVGYVLQDPFLFSG-SIRENIALGNPE--ATD----EEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLAL 620 (709)
T ss_pred heeEEcccchhhcC-cHHHHHhcCCCC--CCH----HHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHH
Confidence 99999999999886 999999875321 111 223333333333 223345566899999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||+++|+|||||||||+||+.+.+.+.+.|.++.. |+|+|++||.+..+.. ||||+||++|+|+++|+.+++.
T Consensus 621 ARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~-~~T~I~IaHRl~ti~~-adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 621 ARALLSKPKILLLDEATSALDPETEAIILQNLLQILQ-GRTVIIIAHRLSTIRS-ADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhc-CCeEEEEEccchHhhh-ccEEEEccCCceeccCCHHHHH
Confidence 9999999999999999999999999999999998754 7999999999998865 9999999999999999999874
No 298
>KOG0065|consensus
Probab=100.00 E-value=9.7e-42 Score=384.18 Aligned_cols=221 Identities=27% Similarity=0.397 Sum_probs=186.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCC--CCccEEEEcCccCCCchHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIK--PTSGNAYVMNHSIRDSMDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~ 418 (566)
++...+|+.+.-....+.+.+|+||+=-+.||-.+||+|+|||||||||++|+|-.. ..+|+|.++|.+... ...+
T Consensus 786 ~V~~w~dl~~~~~~qG~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q--~tF~ 863 (1391)
T KOG0065|consen 786 DVFYWVDLPYEMPIQGGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ--ETFA 863 (1391)
T ss_pred ceEEEEeCCccccccccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch--hhhc
Confidence 345556665544322346789999999999999999999999999999999999753 247899999998653 4567
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhc---CCCchHHHHHHHHHHHHcCCCCccccCcCc----CChhHHHHHHHHHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVR---NVPSVLLNTIVNESLNKFALGHYSDREVRT----LSGGNKRKLSTAIA 491 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----LSgGqkqrv~la~a 491 (566)
+.+|||-|++.-.+.+||+|-|.|.+.++ ..+..+..+.++++++.++|++..+.-++. ||..||+|+.||--
T Consensus 864 R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~daiVG~~G~GLs~eQRKrLTIgVE 943 (1391)
T KOG0065|consen 864 RVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYADALVGLPGSGLSTEQRKRLTIGVE 943 (1391)
T ss_pred cccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhhhhhccCCCCCCCHHHhceeeEEEE
Confidence 88999999877668999999999987665 234444457899999999999888877776 99999999999999
Q ss_pred HcCCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHH-HHHhhCCEEEEEE-CCEEEEecCccc
Q psy7366 492 LLGNP-PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME-ECEALCTKLTIMV-NGQFTCLGSATH 563 (566)
Q Consensus 492 l~~~p-~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~-~~~~~~drv~~l~-~G~i~~~g~~~~ 563 (566)
|+.+| .||+|||||||||..+...+++.++++++.|.|||++-|.+. .+.+-.|++++|+ +|+.++.|+..+
T Consensus 944 LvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 944 LVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999 999999999999999999999999999999999999999984 3345579999995 678999998753
No 299
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=3.5e-42 Score=355.72 Aligned_cols=187 Identities=28% Similarity=0.450 Sum_probs=169.2
Q ss_pred EEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHH
Q psy7366 377 LLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNT 456 (566)
Q Consensus 377 l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~ 456 (566)
|+||||||||||+++|+|+++|++|+|.++|+++..... .+++++|+||++.+|+.+|+.||+.+.....+.+.....+
T Consensus 1 l~G~nGsGKSTLl~~iaGl~~p~~G~I~i~g~~i~~~~~-~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~ 79 (325)
T TIGR01187 1 LLGPSGCGKTTLLRLLAGFEQPDSGSIMLDGEDVTNVPP-HLRHINMVFQSYALFPHMTVEENVAFGLKMRKVPRAEIKP 79 (325)
T ss_pred CcCCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCH-HHCCEEEEecCccccCCCcHHHHHHHHHhhcCCCHHHHHH
Confidence 689999999999999999999999999999998854322 3567999999999999999999999876544444444456
Q ss_pred HHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEcc
Q psy7366 457 IVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSH 535 (566)
Q Consensus 457 ~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsH 535 (566)
++.++++.+++.+..++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+++.|+++.++ |.|||++||
T Consensus 80 ~~~~~l~~~~l~~~~~~~~~~LSgGq~qRvalaraL~~~p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tiiivTH 159 (325)
T TIGR01187 80 RVLEALRLVQLEEFADRKPHQLSGGQQQRVALARALVFKPKILLLDEPLSALDKKLRDQMQLELKTIQEQLGITFVFVTH 159 (325)
T ss_pred HHHHHHHHcCCcchhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 7889999999999899999999999999999999999999999999999999999999999999998765 899999999
Q ss_pred CHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 536 NMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 536 d~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|++++..+|||+++|++|+++..|+++++
T Consensus 160 d~~e~~~~~d~i~vl~~G~i~~~g~~~~~ 188 (325)
T TIGR01187 160 DQEEAMTMSDRIAIMRKGKIAQIGTPEEI 188 (325)
T ss_pred CHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999998875
No 300
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1e-41 Score=318.08 Aligned_cols=160 Identities=34% Similarity=0.515 Sum_probs=148.6
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-h-HHhcCc
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-M-DLVRSY 420 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~-~~~~~~ 420 (566)
++++|+++.|+ ++++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... . ...++.
T Consensus 1 l~~~~l~~~~~----~~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~ 76 (163)
T cd03216 1 LELRGITKRFG----GVKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAG 76 (163)
T ss_pred CEEEEEEEEEC----CeEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcC
Confidence 46899999996 45799999999999999999999999999999999999999999999999987642 2 335667
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
++|+|| ||||||||++|||||+.+|++||
T Consensus 77 i~~~~q---------------------------------------------------LS~G~~qrl~laral~~~p~ill 105 (163)
T cd03216 77 IAMVYQ---------------------------------------------------LSVGERQMVEIARALARNARLLI 105 (163)
T ss_pred eEEEEe---------------------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 999998 99999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEE
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTC 557 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~ 557 (566)
|||||+|||+.+++.+.+.|++++++|.|||++|||++++..+||++++|++|++++
T Consensus 106 lDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 106 LDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999998779999999999999999999999999999875
No 301
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-42 Score=323.37 Aligned_cols=170 Identities=30% Similarity=0.562 Sum_probs=153.3
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCce
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i 421 (566)
++++|+++.|+.. ...+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. .....++++
T Consensus 1 l~~~~l~~~~~~~--~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (171)
T cd03228 1 IEFKNVSFSYPGR--PKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNI 78 (171)
T ss_pred CEEEEEEEEcCCC--CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhE
Confidence 4689999999631 1369999999999999999999999999999999999999999999999988754 233456789
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|+||++.+++ .|+.||+ ||+||||||+|||||+.+|++|||
T Consensus 79 ~~~~~~~~~~~-~t~~e~l-------------------------------------LS~G~~~rl~la~al~~~p~llll 120 (171)
T cd03228 79 AYVPQDPFLFS-GTIRENI-------------------------------------LSGGQRQRIAIARALLRDPPILIL 120 (171)
T ss_pred EEEcCCchhcc-chHHHHh-------------------------------------hCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999988776 5998886 999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
||||+|||+.++..+.++|+++.+ +.|||++|||++++.. ||++++|++|+
T Consensus 121 DEP~~gLD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~-~d~~~~l~~g~ 171 (171)
T cd03228 121 DEATSALDPETEALILEALRALAK-GKTVIVIAHRLSTIRD-ADRIIVLDDGR 171 (171)
T ss_pred ECCCcCCCHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHh-CCEEEEEcCCC
Confidence 999999999999999999999854 7999999999999987 99999999984
No 302
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.3e-42 Score=389.17 Aligned_cols=210 Identities=22% Similarity=0.326 Sum_probs=182.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. .++++|+|+||+|++||.+||+|+||||||||+|+|+|+++|++|+|.+||.++.. ....+|++
T Consensus 451 ~I~~~nvsf~Y~~--~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 528 (686)
T TIGR03797 451 AIEVDRVTFRYRP--DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQ 528 (686)
T ss_pred eEEEEEEEEEcCC--CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhc
Confidence 5899999999963 24679999999999999999999999999999999999999999999999999976 56678899
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-----------cccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-----------SDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGqkqrv~la 489 (566)
||||||++.+|++ |++||+.++.. .+ .+.+.++++..++.+. .......||||||||++||
T Consensus 529 i~~v~Q~~~lf~g-TI~eNi~~~~~---~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialA 600 (686)
T TIGR03797 529 LGVVLQNGRLMSG-SIFENIAGGAP---LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIA 600 (686)
T ss_pred cEEEccCCccCcc-cHHHHHhcCCC---CC----HHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999886 99999987521 11 2345666666666432 2233467999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|++||||||||+||+.+.+.+.+.|+++ ++|+|+|||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 601 RAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~~i~~-~D~Iivl~~G~iv~~G~~~~Ll 672 (686)
T TIGR03797 601 RALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLSTIRN-ADRIYVLDAGRVVQQGTYDELM 672 (686)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChHHHHc-CCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999876 6899999999988865 9999999999999999998864
No 303
>KOG0057|consensus
Probab=100.00 E-value=3.7e-42 Score=357.29 Aligned_cols=213 Identities=27% Similarity=0.440 Sum_probs=186.4
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhc
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVR 418 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~ 418 (566)
+..|+++|++++|+. ++++|+++||+|++||.+||+|+|||||||++|+|.+++. ++|+|++||.+++. ..+.+|
T Consensus 349 ~~~I~F~dV~f~y~~---k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR 424 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYGP---KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLR 424 (591)
T ss_pred CCcEEEEeeEEEeCC---CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhh
Confidence 456999999999983 4559999999999999999999999999999999999999 99999999999976 566789
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-----------cccCcCcCChhHHHHHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-----------SDREVRTLSGGNKRKLS 487 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGqkqrv~ 487 (566)
+-|||||||..+|++ ||..||.++. +.. ..+.+.+..+++++.+. ...+...|||||||||+
T Consensus 425 ~~Ig~VPQd~~LFnd-TIl~NI~YGn-----~sa-s~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvs 497 (591)
T KOG0057|consen 425 QSIGVVPQDSVLFND-TILYNIKYGN-----PSA-SDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVS 497 (591)
T ss_pred hheeEeCCcccccch-hHHHHhhcCC-----CCc-CHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHH
Confidence 999999999999886 9999998753 111 13346677777777532 23455689999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||++++|+|+++|||||+||.++..++.+.+.+ ...++|+|+|-|+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 498 laRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~-~~~~rTvI~IvH~l~ll~~-~DkI~~l~nG~v~e~gth~ell 573 (591)
T KOG0057|consen 498 LARAFLKDAPILLLDEATSALDSETEREILDMIMD-VMSGRTVIMIVHRLDLLKD-FDKIIVLDNGTVKEYGTHSELL 573 (591)
T ss_pred HHHHHhcCCCeEEecCcccccchhhHHHHHHHHHH-hcCCCeEEEEEecchhHhc-CCEEEEEECCeeEEeccHHHHh
Confidence 99999999999999999999999999999999988 4458999999999999876 9999999999999999998874
No 304
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.1e-42 Score=383.24 Aligned_cols=211 Identities=21% Similarity=0.346 Sum_probs=179.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|+++.|.. ++++|+|+||+|++|+.+||+||||||||||+++|+|++ |++|+|.++|.++.. ....+|++
T Consensus 349 ~i~~~~vsf~~~~---~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~ 424 (588)
T PRK11174 349 TIEAEDLEILSPD---GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKH 424 (588)
T ss_pred eEEEEeeEEeccC---CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhh
Confidence 4899999876542 467999999999999999999999999999999999999 999999999999876 45677889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCC-----------CCccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFAL-----------GHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgGqkqrv~la 489 (566)
|+||||++.+|+. |++||+.++.. ...+ +.+.++++..++ +.........||||||||++||
T Consensus 425 i~~v~Q~~~LF~~-TI~eNI~~g~~--~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialA 497 (588)
T PRK11174 425 LSWVGQNPQLPHG-TLRDNVLLGNP--DASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALA 497 (588)
T ss_pred eEEecCCCcCCCc-CHHHHhhcCCC--CCCH----HHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHH
Confidence 9999999999986 99999987521 1222 233444444433 3333445567999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|+|||||||||+||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 498 RAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~~i~~-aD~Iivl~~G~i~e~G~~~eL~ 571 (588)
T PRK11174 498 RALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLEDLAQ-WDQIWVMQDGQIVQQGDYAELS 571 (588)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChHHHHh-CCEEEEEeCCeEeecCCHHHHH
Confidence 99999999999999999999999999999998874 47999999999988765 9999999999999999988774
No 305
>COG4586 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-42 Score=332.41 Aligned_cols=207 Identities=31% Similarity=0.435 Sum_probs=187.7
Q ss_pred cceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecC-CCCCCCCCHH
Q psy7366 359 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQF-DALNDRLTPR 437 (566)
Q Consensus 359 ~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~-~~l~~~~tv~ 437 (566)
..+++|+||+|++|+++|++|||||||||+||+|+|++.|++|.|.++|.......+.+-+++++|+-. ..++..+.+.
T Consensus 37 ~~AVqdisf~IP~G~ivgflGaNGAGKSTtLKmLTGll~p~~G~v~V~G~~Pf~~~~~~~~~~~~v~gqk~ql~Wdlp~~ 116 (325)
T COG4586 37 IEAVQDISFEIPKGEIVGFLGANGAGKSTTLKMLTGLLLPTSGKVRVNGKDPFRRREEYLRSIGLVMGQKLQLWWDLPAL 116 (325)
T ss_pred hhhhheeeeecCCCcEEEEEcCCCCcchhhHHHHhCccccCCCeEEecCcCcchhHHHHHHHHHHHhhhhheeeeechhh
Confidence 348899999999999999999999999999999999999999999999998766555555678887644 4566677777
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHH
Q psy7366 438 EHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLW 517 (566)
Q Consensus 438 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 517 (566)
+-+.....++.++.....++.+.+.+.++++..++.+++.||-|||.|+.||.+|+++|++|+|||||-|||...+..+.
T Consensus 117 ds~~v~~~Iy~Ipd~~F~~r~~~l~eiLdl~~~lk~~vr~LSlGqRmraeLaaaLLh~p~VLfLDEpTvgLDV~aq~~ir 196 (325)
T COG4586 117 DSLEVLKLIYEIPDDEFAERLDFLTEILDLEGFLKWPVRKLSLGQRMRAELAAALLHPPKVLFLDEPTVGLDVNAQANIR 196 (325)
T ss_pred hhHHHHHHHHhCCHHHHHHHHHHHHHHhcchhhhhhhhhhccchHHHHHHHHHHhcCCCcEEEecCCccCcchhHHHHHH
Confidence 77776666778888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 518 TCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 518 ~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
+.+++..++ +.||+++||+++.+..+||||++|+.|+++++|+.+++.
T Consensus 197 ~Flke~n~~~~aTVllTTH~~~di~~lc~rv~~I~~Gqlv~dg~l~~l~ 245 (325)
T COG4586 197 EFLKEYNEERQATVLLTTHIFDDIATLCDRVLLIDQGQLVFDGTLAQLQ 245 (325)
T ss_pred HHHHHHHHhhCceEEEEecchhhHHHhhhheEEeeCCcEeecccHHHHH
Confidence 999999765 999999999999999999999999999999999987764
No 306
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=8.3e-42 Score=381.77 Aligned_cols=214 Identities=24% Similarity=0.386 Sum_probs=187.8
Q ss_pred EeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC--ccEEEEcCccCCCchHHhcCceE
Q psy7366 345 VKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT--SGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 345 ~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~--~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++|+++.|+ ++.+|+|+|+++++||++||+|||||||||||++|+|..+|+ +|+|.++|+++.. ..++++|
T Consensus 71 ~~~l~~~~~----~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~~---~~~~~i~ 143 (659)
T PLN03211 71 ISDETRQIQ----ERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPTK---QILKRTG 143 (659)
T ss_pred cccccccCC----CCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECch---hhccceE
Confidence 567788886 567999999999999999999999999999999999999885 8999999998642 2345799
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhc---CCCchHHHHHHHHHHHHcCCCCcc-----ccCcCcCChhHHHHHHHHHHHcC
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVR---NVPSVLLNTIVNESLNKFALGHYS-----DREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~LSgGqkqrv~la~al~~ 494 (566)
||+|++.+++.+||+||+.+....+ .....+..++++++++.+||.+.. ++.+..|||||||||+||++|+.
T Consensus 144 yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~ 223 (659)
T PLN03211 144 FVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLI 223 (659)
T ss_pred EECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHh
Confidence 9999999999999999998865432 122334456688999999997655 34577899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHH-HHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME-ECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~-~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
+|+||||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.++||++++|++|++++.|+++++.
T Consensus 224 ~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~ 295 (659)
T PLN03211 224 NPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAM 295 (659)
T ss_pred CCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHH
Confidence 99999999999999999999999999999888999999999998 588999999999999999999988763
No 307
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=5.6e-41 Score=376.58 Aligned_cols=222 Identities=23% Similarity=0.319 Sum_probs=197.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hHH----
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MDL---- 416 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~---- 416 (566)
+++++|+++.|+...+.+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ...
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 689999999996322235699999999999999999999999999999999999999999999999988642 222
Q ss_pred hcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCC
Q psy7366 417 VRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNP 496 (566)
Q Consensus 417 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p 496 (566)
.++.++|+||++.+++.+|+.||+.+.....+.+..+..+.+.++++.+++.+..++++.+||+||+||++|||||+.+|
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LAraL~~~P 163 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARALMNGG 163 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 25789999999999999999999987654434444445567889999999998899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
++|||||||+|||+.+++.+.++|++++++|.|+|++||+++.+. .|||+++|++|+++++|++++.
T Consensus 164 ~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~ 230 (648)
T PRK10535 164 QVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAA-QAERVIEIRDGEIVRNPPAQEK 230 (648)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHH-hCCEEEEEECCEEEeecCcccc
Confidence 999999999999999999999999998877999999999999885 6999999999999999998765
No 308
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-41 Score=329.35 Aligned_cols=195 Identities=23% Similarity=0.356 Sum_probs=159.3
Q ss_pred EEEeeeEEEeCCcCC-CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 343 LVVKRLFKIYANSKG-TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 343 l~~~~l~~~y~~~~~-~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
++++|+++.|+...+ .+.+|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++| ++
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g------------~i 68 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG------------SI 68 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC------------EE
Confidence 468999999963100 03699999999999999999999999999999999999999999999998 49
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHH-----HHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI-----VNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
+|+||++.+++ .|++||+.+.... ........ +.+.+..+ ++....++++.+||+|||||++|||||+.
T Consensus 69 ~~~~q~~~l~~-~t~~enl~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~ 144 (204)
T cd03250 69 AYVSQEPWIQN-GTIRENILFGKPF---DEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYS 144 (204)
T ss_pred EEEecCchhcc-CcHHHHhccCCCc---CHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 99999998874 6999999774321 11111111 11122222 23344567789999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWT-CIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
+|+++||||||+|||+.+++.+.+ +++++.++|.|||++||+++++.. ||++++|++|+
T Consensus 145 ~p~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~-~d~i~~l~~G~ 204 (204)
T cd03250 145 DADIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPH-ADQIVVLDNGR 204 (204)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhh-CCEEEEEeCCC
Confidence 999999999999999999999988 566666668999999999999988 99999999985
No 309
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.8e-41 Score=331.70 Aligned_cols=199 Identities=20% Similarity=0.276 Sum_probs=164.8
Q ss_pred EEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-----hHHhc
Q psy7366 344 VVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-----MDLVR 418 (566)
Q Consensus 344 ~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-----~~~~~ 418 (566)
.+.|+.+.|+. ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... ....+
T Consensus 2 ~~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (218)
T cd03290 2 QVTNGYFSWGS---GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNR 78 (218)
T ss_pred eeeeeEEecCC---CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhc
Confidence 47789999963 35799999999999999999999999999999999999999999999999876431 12245
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHH
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLS 487 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~ 487 (566)
+.++|++|++.++ ..|++||+.+... ... ....+.++.+++.+ ..++++.+|||||||||+
T Consensus 79 ~~i~~~~q~~~~~-~~t~~~nl~~~~~---~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~ 150 (218)
T cd03290 79 YSVAYAAQKPWLL-NATVEENITFGSP---FNK----QRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRIC 150 (218)
T ss_pred ceEEEEcCCCccc-cccHHHHHhhcCc---CCH----HHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHH
Confidence 6799999999877 5799999976421 111 12234445555432 235678999999999999
Q ss_pred HHHHHcCCCCEEEEeCCCCCCCHHHHHHHHH--HHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 488 TAIALLGNPPLIFLDEPTSGMDPGARRFLWT--CIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 488 la~al~~~p~lllLDEPt~gLD~~~~~~l~~--~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
|||||+.+|++|||||||+|||+.++..+++ +++.+.+.|.|+|++||+.+++. .||++++|++|+
T Consensus 151 laral~~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~-~~d~i~~l~~G~ 218 (218)
T cd03290 151 VARALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLP-HADWIIAMKDGS 218 (218)
T ss_pred HHHHHhhCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHh-hCCEEEEecCCC
Confidence 9999999999999999999999999999998 66666666899999999999985 699999999884
No 310
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-41 Score=378.54 Aligned_cols=213 Identities=29% Similarity=0.451 Sum_probs=186.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|+++.|+.+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+.
T Consensus 338 ~i~~~~v~f~y~~~--~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~ 415 (574)
T PRK11160 338 SLTLNNVSFTYPDQ--PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQA 415 (574)
T ss_pred eEEEEEEEEECCCC--CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhh
Confidence 59999999999631 3569999999999999999999999999999999999999999999999999876 45667889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCcccc----------CcCcCChhHHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDR----------EVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~LSgGqkqrv~la~ 490 (566)
|+|+||++.+|+. |++||+.++.. . ..++.+.++++..++.++.++ ....||||||||++|||
T Consensus 416 i~~v~Q~~~lf~~-ti~~Ni~~~~~-----~-~~~~~i~~al~~~~l~~~i~~p~GldT~vge~g~~LSgGqrqRialAR 488 (574)
T PRK11160 416 ISVVSQRVHLFSA-TLRDNLLLAAP-----N-ASDEALIEVLQQVGLEKLLEDDKGLNAWLGEGGRQLSGGEQRRLGIAR 488 (574)
T ss_pred eeEEcccchhhcc-cHHHHhhcCCC-----c-cCHHHHHHHHHHcCCHHHHcCccccCchhcCCCCCCCHHHHHHHHHHH
Confidence 9999999999876 99999987521 1 123456778888888654433 45679999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|++++|++|||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 489 all~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~~~~~-~d~i~~l~~G~i~~~g~~~~l~ 561 (574)
T PRK11160 489 ALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLTGLEQ-FDRICVMDNGQIIEQGTHQELL 561 (574)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChhHHHh-CCEEEEEeCCeEEEeCCHHHHH
Confidence 9999999999999999999999999999999875 48999999999999865 9999999999999999988764
No 311
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-41 Score=331.05 Aligned_cols=188 Identities=29% Similarity=0.441 Sum_probs=170.3
Q ss_pred CeEEEeeeEEEeCCcCC-----CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchH
Q psy7366 341 DVLVVKRLFKIYANSKG-----TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMD 415 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~-----~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~ 415 (566)
.+++++|+++.|..+.+ ...+++||||+|++||++||+|.||||||||-|+|.|+++|++|+|+++|+++....
T Consensus 3 ~ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~- 81 (268)
T COG4608 3 PLLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS- 81 (268)
T ss_pred ceEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc-
Confidence 36899999999975322 247899999999999999999999999999999999999999999999998864311
Q ss_pred HhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 416 LVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 416 ~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
.....+++.++|+.+|+. +.+++++++|||||+||++|||||+.
T Consensus 82 -----------------------------------~~~~~~~v~elL~~Vgl~~~~~~ryPhelSGGQrQRi~IARALal 126 (268)
T COG4608 82 -----------------------------------KEERRERVLELLEKVGLPEEFLYRYPHELSGGQRQRIGIARALAL 126 (268)
T ss_pred -----------------------------------hhHHHHHHHHHHHHhCCCHHHhhcCCcccCchhhhhHHHHHHHhh
Confidence 223356688999999996 58899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|+++++|||+|+||...+.++.++|.+++++ |.|.+++|||+..+..+|||++||+.|+|++.|+.+++
T Consensus 127 ~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~ 197 (268)
T COG4608 127 NPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEV 197 (268)
T ss_pred CCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHH
Confidence 99999999999999999999999999999876 99999999999999999999999999999999998876
No 312
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-41 Score=372.54 Aligned_cols=206 Identities=24% Similarity=0.380 Sum_probs=178.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+|+++|+++.|+ ++++|+|+||+|.+||+++|+||||||||||+|+|+|+++|++|+|.++|. ..+
T Consensus 1 ml~i~~ls~~~~----~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~----------~~i 66 (530)
T PRK15064 1 MLSTANITMQFG----AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN----------ERL 66 (530)
T ss_pred CEEEEEEEEEeC----CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC----------CEE
Confidence 478999999996 467999999999999999999999999999999999999999999999873 259
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHH-h----------cCCC---------------------chHHHHHHHHHHHHcCCCC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSR-V----------RNVP---------------------SVLLNTIVNESLNKFALGH 469 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~-~----------~~~~---------------------~~~~~~~~~~~l~~~~l~~ 469 (566)
+|++|++.+++.+|+.||+.+... . ...+ ....+.++.++++.+++.+
T Consensus 67 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 146 (530)
T PRK15064 67 GKLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPE 146 (530)
T ss_pred EEEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCCh
Confidence 999999988899999999876321 0 0000 0112356788999999976
Q ss_pred c-cccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEE
Q psy7366 470 Y-SDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLT 548 (566)
Q Consensus 470 ~-~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~ 548 (566)
. .++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|.+ .|.|||+||||++++..+||+++
T Consensus 147 ~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~---~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 147 EQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE---RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh---CCCeEEEEeCCHHHHHhhcceEE
Confidence 4 3578999999999999999999999999999999999999999999999864 48999999999999999999999
Q ss_pred EEECCEE-EEecCcccc
Q psy7366 549 IMVNGQF-TCLGSATHL 564 (566)
Q Consensus 549 ~l~~G~i-~~~g~~~~l 564 (566)
+|++|++ ++.|+++++
T Consensus 224 ~l~~g~i~~~~g~~~~~ 240 (530)
T PRK15064 224 DLDYGELRVYPGNYDEY 240 (530)
T ss_pred EEeCCEEEEecCCHHHH
Confidence 9999999 478877644
No 313
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=9e-42 Score=380.86 Aligned_cols=214 Identities=21% Similarity=0.354 Sum_probs=181.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|+++.|+. +++++|+|+||+|++|+.++|+|+||||||||+++|+|+++|++|+|.++|.++.. ....+++.
T Consensus 341 ~i~~~~vsf~y~~--~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~ 418 (582)
T PRK11176 341 DIEFRNVTFTYPG--KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQ 418 (582)
T ss_pred eEEEEEEEEecCC--CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhh
Confidence 5999999999963 23679999999999999999999999999999999999999999999999999865 44567888
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la 489 (566)
|+|+||++.+|+. |++||+.++.. ....++.+.++++..++.+ .......+||||||||++||
T Consensus 419 i~~v~Q~~~lf~~-Ti~~Ni~~~~~-----~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LA 492 (582)
T PRK11176 419 VALVSQNVHLFND-TIANNIAYART-----EQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIA 492 (582)
T ss_pred ceEEccCceeecc-hHHHHHhcCCC-----CCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHH
Confidence 9999999999875 99999986421 1111234555566555432 22233456999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|++|||||||++||+.+...+++.|.++. +++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 493 Rall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~~~~-~~D~Ii~l~~g~i~e~g~~~~l~ 566 (582)
T PRK11176 493 RALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLSTIE-KADEILVVEDGEIVERGTHAELL 566 (582)
T ss_pred HHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchHHHH-hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999998874 4799999999998775 59999999999999999988764
No 314
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.6e-41 Score=379.34 Aligned_cols=211 Identities=18% Similarity=0.276 Sum_probs=183.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|+++.|+. ++++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.++|.++.. ....++++
T Consensus 340 ~i~~~~v~f~y~~---~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~ 416 (592)
T PRK10790 340 RIDIDNVSFAYRD---DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQG 416 (592)
T ss_pred eEEEEEEEEEeCC---CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhh
Confidence 4899999999963 3569999999999999999999999999999999999999999999999999875 45678899
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la 489 (566)
|+|+||++.+|++ |+++|+.++. ..+ ++.+.++++.+|+.+ ........||||||||++||
T Consensus 417 i~~v~Q~~~lF~~-Ti~~NI~~~~---~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialA 488 (592)
T PRK10790 417 VAMVQQDPVVLAD-TFLANVTLGR---DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALA 488 (592)
T ss_pred eEEEccCCccccc-hHHHHHHhCC---CCC----HHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999987 9999998752 112 234566666666532 22234467999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 489 RaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~~l~~-~D~ii~l~~G~i~~~G~~~~L~ 562 (592)
T PRK10790 489 RVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLSTIVE-ADTILVLHRGQAVEQGTHQQLL 562 (592)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchHHHHh-CCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999988754 6999999999988764 9999999999999999998764
No 315
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=9.7e-42 Score=388.64 Aligned_cols=211 Identities=22% Similarity=0.387 Sum_probs=180.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. .++++|+|+||+|++||.++|+||||||||||+|+|+|+++|++|+|.++|.++.. ....+|++
T Consensus 477 ~I~~~~vsf~y~~--~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 554 (710)
T TIGR03796 477 YVELRNITFGYSP--LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANS 554 (710)
T ss_pred eEEEEEEEEecCC--CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhh
Confidence 5999999999973 23679999999999999999999999999999999999999999999999999865 45668899
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la 489 (566)
|+||||++.+|+. |++||+.++.. ..+ .+.+.++++..++.+ ........||||||||++||
T Consensus 555 i~~v~Q~~~lf~g-Ti~eNi~l~~~--~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLA 627 (710)
T TIGR03796 555 VAMVDQDIFLFEG-TVRDNLTLWDP--TIP----DADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIA 627 (710)
T ss_pred eeEEecCChhhhc-cHHHHhhCCCC--CCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHH
Confidence 9999999999875 99999986421 112 233445555555432 23344567999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|++||||||||+||+.+.+.+.+.|++ .++|+|+|||+++.+.. ||||++|++|++++.|+.+++.
T Consensus 628 Rall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~-~D~Iivl~~G~i~~~G~~~~Ll 699 (710)
T TIGR03796 628 RALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRD-CDEIIVLERGKVVQRGTHEELW 699 (710)
T ss_pred HHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHh-CCEEEEEeCCEEEEecCHHHHH
Confidence 999999999999999999999999999999875 48999999999998865 9999999999999999998874
No 316
>KOG0055|consensus
Probab=100.00 E-value=8.9e-42 Score=385.04 Aligned_cols=214 Identities=25% Similarity=0.428 Sum_probs=182.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+.++ +..+|+|+||.|++|+.++|+|||||||||++++|.+++.|++|+|.+||.++.. ..+++|.+
T Consensus 350 ~ief~nV~FsYPsRp-dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~ 428 (1228)
T KOG0055|consen 350 EIEFRNVCFSYPSRP-DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQ 428 (1228)
T ss_pred ceEEEEEEecCCCCC-cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhh
Confidence 589999999999654 4579999999999999999999999999999999999999999999999999976 67788999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHc-----------CCCCccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKF-----------ALGHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgGqkqrv~la 489 (566)
||.|.|+|.+|. .|++||+.++.. .. ..+.+.++.+.. |++......--+||||||||++||
T Consensus 429 iglV~QePvlF~-~tI~eNI~~G~~-----da-t~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIA 501 (1228)
T KOG0055|consen 429 IGLVSQEPVLFA-TTIRENIRYGKP-----DA-TREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIA 501 (1228)
T ss_pred cCeeeechhhhc-ccHHHHHhcCCC-----cc-cHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHH
Confidence 999999998776 599999987531 11 111222222222 222233344456999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+.+|+|||||||||+||+++.+.+.+.|.++ .+|+|.|+|+|++..+.. +|++++|++|+|++.|+++||.
T Consensus 502 Ralv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~-~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE~G~h~ELi 575 (1228)
T KOG0055|consen 502 RALVRNPKILLLDEATSALDAESERVVQEALDKA-SKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVEQGTHDELI 575 (1228)
T ss_pred HHHHhCCCEEEecCcccccCHHHHHHHHHHHHHh-hcCCeEEEEeeehhhhhc-cCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999999876 458999999999999998 9999999999999999999874
No 317
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.9e-41 Score=323.65 Aligned_cols=192 Identities=24% Similarity=0.347 Sum_probs=167.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+++++|+++.|+ ++.+++ +||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.... ++.+
T Consensus 1 ~l~~~~l~~~~~----~~~l~~-vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~---~~~~ 72 (195)
T PRK13541 1 MLSLHQLQFNIE----QKNLFD-LSITFLPSAITYIKGANGCGKSSLLRMIAGIMQPSSGNIYYKNCNINNIA---KPYC 72 (195)
T ss_pred CeEEEEeeEEEC----CcEEEE-EEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCcccChhh---hhhE
Confidence 378999999996 344555 99999999999999999999999999999999999999999998875321 3469
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEE
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFL 501 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllL 501 (566)
+|++|++.+++.+|+.||+.+...... ..+.+.++++.+++.+..++++.+||||||||++||||++.+|++|||
T Consensus 73 ~~~~~~~~~~~~~tv~~~l~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~~rl~la~al~~~p~~lll 147 (195)
T PRK13541 73 TYIGHNLGLKLEMTVFENLKFWSEIYN-----SAETLYAAIHYFKLHDLLDEKCYSLSSGMQKIVAIARLIACQSDLWLL 147 (195)
T ss_pred EeccCCcCCCccCCHHHHHHHHHHhcc-----cHHHHHHHHHHcCCHhhhccChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999888888999999987543321 134567888999998888999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEE
Q psy7366 502 DEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKL 547 (566)
Q Consensus 502 DEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv 547 (566)
||||+|||+.+++.+.++|++..+.|.|||++||+++++.. +|.+
T Consensus 148 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~-~~~~ 192 (195)
T PRK13541 148 DEVETNLSKENRDLLNNLIVMKANSGGIVLLSSHLESSIKS-AQIL 192 (195)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCccccch-hhee
Confidence 99999999999999999998776678999999999998876 6655
No 318
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4e-41 Score=372.51 Aligned_cols=206 Identities=26% Similarity=0.366 Sum_probs=178.7
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+|+++|+++.|+. ++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. .+
T Consensus 5 ~~l~i~~l~~~y~~---~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~----------~~ 71 (556)
T PRK11819 5 YIYTMNRVSKVVPP---KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPG----------IK 71 (556)
T ss_pred EEEEEeeEEEEeCC---CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC----------CE
Confidence 47999999999961 367999999999999999999999999999999999999999999999752 36
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHH-hc-------------CCCc----------------------hHHHHHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSR-VR-------------NVPS----------------------VLLNTIVNESLNK 464 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~-~~-------------~~~~----------------------~~~~~~~~~~l~~ 464 (566)
+||+||++.+++.+|+.||+.+... +. .... .....++.++++.
T Consensus 72 i~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 151 (556)
T PRK11819 72 VGYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDA 151 (556)
T ss_pred EEEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHh
Confidence 9999999999999999999976421 00 1110 0113467788999
Q ss_pred cCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhC
Q psy7366 465 FALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALC 544 (566)
Q Consensus 465 ~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~ 544 (566)
+++.. .++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.++|+++ +.|||+||||++++..+|
T Consensus 152 ~gl~~-~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~---~~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 152 LRCPP-WDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDY---PGTVVAVTHDRYFLDNVA 227 (556)
T ss_pred CCCCc-ccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhC---CCeEEEEeCCHHHHHhhc
Confidence 99964 78999999999999999999999999999999999999999999999999887 359999999999999999
Q ss_pred CEEEEEECCEEE-EecCccc
Q psy7366 545 TKLTIMVNGQFT-CLGSATH 563 (566)
Q Consensus 545 drv~~l~~G~i~-~~g~~~~ 563 (566)
|++++|++|+++ +.|+.++
T Consensus 228 d~i~~l~~g~i~~~~g~~~~ 247 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSS 247 (556)
T ss_pred CeEEEEeCCEEEEecCCHHH
Confidence 999999999986 6777654
No 319
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.9e-41 Score=370.96 Aligned_cols=218 Identities=26% Similarity=0.415 Sum_probs=185.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. +++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++.
T Consensus 316 ~i~~~~v~~~y~~--~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~ 393 (544)
T TIGR01842 316 HLSVENVTIVPPG--GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKH 393 (544)
T ss_pred eEEEEEEEEEcCC--CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhh
Confidence 5999999999963 23579999999999999999999999999999999999999999999999998865 44567889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHH-----HHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHc
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNT-----IVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
++|+||++.+|+. |++||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++||||++
T Consensus 394 i~~v~q~~~lf~~-ti~~Ni~~~~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 394 IGYLPQDVELFPG-TVAENIARFGE--NADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred eEEecCCcccccc-cHHHHHhccCC--CCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 9999999999886 99999975321 122222111 123445555 4555566778899999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
.+|++|||||||++||+.+++.+.+.|.++..+|+|+|++||+++.+ ..||++++|++|++++.|+++++.
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~-~~~d~i~~l~~G~i~~~g~~~~l~ 541 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLL-GCVDKILVLQDGRIARFGERDEVL 541 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHH-HhCCEEEEEECCEEEeeCCHHHHh
Confidence 99999999999999999999999999998866689999999999876 469999999999999999988764
No 320
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-41 Score=309.99 Aligned_cols=220 Identities=26% Similarity=0.361 Sum_probs=198.6
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcC-ccCCCc--hHHh
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMN-HSIRDS--MDLV 417 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g-~~~~~~--~~~~ 417 (566)
..++++|++.+|+ +..+|+++||+|.+||.-+|+|||||||||++.+|+|-.+|+.|+|+++| .++++. ..-.
T Consensus 4 ~iL~~~~vsVsF~----GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtrp~~G~v~f~g~~dl~~~~e~~IA 79 (249)
T COG4674 4 IILYLDGVSVSFG----GFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTRPQEGEVLFDGDTDLTKLPEHRIA 79 (249)
T ss_pred ceEEEeceEEEEc----ceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccCCCCcceEEEcCchhhccCCHHHHH
Confidence 3689999999997 67899999999999999999999999999999999999999999999999 788663 3345
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHh--------cCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHH
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRV--------RNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~--------~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la 489 (566)
|..||-=||-|..|.++||+||+.+.... ........+++++++|+..+|.+..++....||.||||++.|+
T Consensus 80 r~GIGRKFQ~PtVfe~ltV~eNLelA~~~~k~v~a~L~~r~~~~e~~ride~La~igL~~~~~~~A~~LSHGqKQwLEIG 159 (249)
T COG4674 80 RAGIGRKFQKPTVFENLTVRENLELALNRDKSVFASLFARLRAEERRRIDELLATIGLGDERDRLAALLSHGQKQWLEIG 159 (249)
T ss_pred HhccCccccCCeehhhccHHHHHHHHhcCCcchHHHhhhhcChhHHHHHHHHHHHcccchhhhhhhhhhccchhhhhhhh
Confidence 77899999999999999999999875432 1122334467899999999999999999999999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
+.++++|++|+||||++|+-.....+.-++|+.++. ..+|++|-|||.++..++++|-||+.|.+.++|+.+++.
T Consensus 160 Mll~Q~P~lLLlDEPvAGMTd~Et~~taeLl~~la~-~hsilVVEHDM~Fvr~~A~~VTVlh~G~VL~EGsld~v~ 234 (249)
T COG4674 160 MLLAQDPKLLLLDEPVAGMTDAETEKTAELLKSLAG-KHSILVVEHDMGFVREIADKVTVLHEGSVLAEGSLDEVQ 234 (249)
T ss_pred eeeccCCcEEEecCccCCCcHHHHHHHHHHHHHHhc-CceEEEEeccHHHHHHhhheeEEEeccceeecccHHHhh
Confidence 999999999999999999999999999999999865 589999999999999999999999999999999998764
No 321
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.3e-41 Score=374.87 Aligned_cols=216 Identities=27% Similarity=0.447 Sum_probs=184.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|+++.|+. ++++|+|+||++++||.+||+||||||||||+++|.|+++|++|+|.+||.+++. ....+|++
T Consensus 328 ~I~f~~vsf~y~~---~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~ 404 (567)
T COG1132 328 SIEFENVSFSYPG---KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKR 404 (567)
T ss_pred eEEEEEEEEEcCC---CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHh
Confidence 4999999999973 4689999999999999999999999999999999999999999999999999976 56678999
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHH-----HHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHc
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV-----NESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
|+||||++.+|. -|++||+.++... ..+++..+.+ .+.+..+ |++.........||||||||++||||++
T Consensus 405 I~~V~Qd~~LF~-~TI~~NI~~g~~~--at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall 481 (567)
T COG1132 405 IGIVSQDPLLFS-GTIRENIALGRPD--ATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALL 481 (567)
T ss_pred ccEEcccceeec-ccHHHHHhcCCCC--CCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHh
Confidence 999999999998 5999999876321 2222222222 2223333 3343444455689999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
++|++||||||||+||+.+...+.+.+.++. +++|+|+|+|.+..+.. ||+|+||++|++++.|+++++.
T Consensus 482 ~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlsti~~-aD~IiVl~~G~i~e~G~h~eLl 551 (567)
T COG1132 482 RNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLSTIKN-ADRIIVLDNGRIVERGTHEELL 551 (567)
T ss_pred cCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhHHHh-CCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999776 56899999999999987 9999999999999999999874
No 322
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.1e-41 Score=384.72 Aligned_cols=213 Identities=26% Similarity=0.433 Sum_probs=182.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. +.+++|+|+||+|++||.++|+|+||||||||+|+|+|+++|++|+|.++|.++.. ....+|+.
T Consensus 463 ~I~~~~vsf~Y~~--~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~ 540 (694)
T TIGR03375 463 EIEFRNVSFAYPG--QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRN 540 (694)
T ss_pred eEEEEEEEEEeCC--CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhc
Confidence 5899999999963 24579999999999999999999999999999999999999999999999999876 45678899
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-----------CccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-----------HYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGqkqrv~la 489 (566)
++||||++.+|+. |++||+.+... ..+ ++.+.++++..++. .........||||||||++||
T Consensus 541 i~~v~Q~~~lf~~-TI~eNi~~~~~--~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalA 613 (694)
T TIGR03375 541 IGYVPQDPRLFYG-TLRDNIALGAP--YAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALA 613 (694)
T ss_pred cEEECCChhhhhh-hHHHHHhCCCC--CCC----HHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHH
Confidence 9999999999886 99999986421 111 23345555555443 223344568999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 614 Rall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~-~~T~iiItHrl~~~~-~~D~iivl~~G~i~e~G~~~eLl 687 (694)
T TIGR03375 614 RALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLA-GKTLVLVTHRTSLLD-LVDRIIVMDNGRIVADGPKDQVL 687 (694)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhC-CCEEEEEecCHHHHH-hCCEEEEEeCCEEEeeCCHHHHH
Confidence 999999999999999999999999999999988754 799999999998875 69999999999999999998874
No 323
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2e-41 Score=384.71 Aligned_cols=212 Identities=21% Similarity=0.371 Sum_probs=178.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|++.+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ....++++
T Consensus 478 ~I~~~nVsf~Y~~~~-~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 556 (711)
T TIGR00958 478 LIEFQDVSFSYPNRP-DVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQ 556 (711)
T ss_pred eEEEEEEEEECCCCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhh
Confidence 599999999997321 3579999999999999999999999999999999999999999999999999865 45667889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la 489 (566)
|+||||++.+|+. |++||+.++.. ..+ ++.+.++++..++.+ .......+||||||||++||
T Consensus 557 i~~v~Q~~~lF~g-TIreNI~~g~~--~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalA 629 (711)
T TIGR00958 557 VALVGQEPVLFSG-SVRENIAYGLT--DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIA 629 (711)
T ss_pred ceEEecCcccccc-CHHHHHhcCCC--CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHH
Confidence 9999999999875 99999987531 111 233455566655432 22334467999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||++++|+|||||||||+||+.+.+.+.+ .. ..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 630 RALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~~i~~-aD~IivL~~G~ive~Gt~~eL~ 701 (711)
T TIGR00958 630 RALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLSTVER-ADQILVLKKGSVVEMGTHKQLM 701 (711)
T ss_pred HHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHHHHHh-CCEEEEEECCEEEEeeCHHHHH
Confidence 99999999999999999999999999888 22 2358999999999998764 9999999999999999998874
No 324
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=322.87 Aligned_cols=216 Identities=25% Similarity=0.370 Sum_probs=190.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC--chHHhc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD--SMDLVR 418 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~--~~~~~~ 418 (566)
.+|+++|++..|+ ++++|+|+|++|++||.++|+|||||||||||++++|.++|++|.+.+.|+...+ ....+|
T Consensus 30 ~li~l~~v~v~r~----gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~pssg~~~~~G~~~G~~~~~~elr 105 (257)
T COG1119 30 PLIELKNVSVRRN----GKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPSSGDVTLLGRRFGKGETIFELR 105 (257)
T ss_pred ceEEecceEEEEC----CEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCCCCceeeeeeeccCCcchHHHH
Confidence 4699999999997 7889999999999999999999999999999999999999999999999998754 237889
Q ss_pred CceEEEecC--CCCCCCCCHHHHHHHH--HH--hcC-CCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHH
Q psy7366 419 SYIGYCPQF--DALNDRLTPREHLEFY--SR--VRN-VPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 419 ~~i~~v~q~--~~l~~~~tv~e~l~~~--~~--~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 491 (566)
++||||... ..+.++.+++|-+.-+ .. ++. ........++..+++.+++.+..+++..+||-||||||.||||
T Consensus 106 k~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~~la~r~~~~LS~Ge~rrvLiaRA 185 (257)
T COG1119 106 KRIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAAAQWLLELLGAKHLADRPFGSLSQGEQRRVLIARA 185 (257)
T ss_pred HHhCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHHHHHHHHHcchhhhccCchhhcCHhHHHHHHHHHH
Confidence 999999865 3355567787766322 11 121 2345566788999999999999999999999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE--GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~--g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
|+.+|++|||||||+|||...++.+.+.|.+++.. +.++|+|||..+++....++++.+++|+++.+|.
T Consensus 186 Lv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~eEi~~~~th~lll~~g~v~~~g~ 256 (257)
T COG1119 186 LVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAEEIPPCFTHRLLLKEGEVVAQGK 256 (257)
T ss_pred HhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchhhcccccceEEEeeCCceeeccc
Confidence 99999999999999999999999999999998765 7899999999999999999999999999998874
No 325
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-41 Score=314.92 Aligned_cols=180 Identities=23% Similarity=0.282 Sum_probs=163.1
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCc----ccccccceeEEcCCCCCCCCCCHHHHHHHHHH-hcCCChhhHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPT----IDKNLSYIGYCPQFDALNDRLTPREHLEFYSR-VRNVPSVLLNTIVN 72 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~----~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~-~~~~~~~~~~~~~~ 72 (566)
+||||++|+++++-.+++ .+.+.... ....++.+|+|||++.|||.+||.||+..+.. ..+.++.++++++.
T Consensus 39 SGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~ 118 (240)
T COG1126 39 SGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKAL 118 (240)
T ss_pred CCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHH
Confidence 599999999999988776 24442221 11235679999999999999999999988754 46899999999999
Q ss_pred HHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhH
Q psy7366 73 ESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEE 152 (566)
Q Consensus 73 ~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~ 152 (566)
++|+++||.+..+.++.+|||||||||+|||||+.+|+++|+|||||+|||+-+.++.+.+++|+++|.|.|++||++.|
T Consensus 119 ~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F 198 (240)
T COG1126 119 ELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF 198 (240)
T ss_pred HHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 153 CEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 153 ~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+.++||||++|++|+++..|+++++...
T Consensus 199 Ar~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 199 AREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred HHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999998654
No 326
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-41 Score=353.40 Aligned_cols=213 Identities=26% Similarity=0.432 Sum_probs=186.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|++. ..++|+|+||++.+||.++|+|++|||||||+++|+|.++|++|+|.++|.++.. ....+++.
T Consensus 336 ~l~~~~vsF~y~~~--~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~ 413 (573)
T COG4987 336 ALELRNVSFTYPGQ--QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRET 413 (573)
T ss_pred eeeeccceeecCCC--ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHH
Confidence 79999999999842 3479999999999999999999999999999999999999999999999999876 34457888
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-----------cccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-----------SDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGqkqrv~la 489 (566)
+++++|.+++|.+ |+++|+.+.. +. ...+.+.++++.+||.++ .+.-...|||||+||++||
T Consensus 414 i~vl~Qr~hlF~~-Tlr~NL~lA~-----~~-AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlA 486 (573)
T COG4987 414 ISVLTQRVHLFSG-TLRDNLRLAN-----PD-ASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALA 486 (573)
T ss_pred HhhhccchHHHHH-HHHHHHhhcC-----CC-CCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHH
Confidence 9999999999987 9999997642 11 123446677888877543 2344568999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|+|+++.+++||||||.|||+.+.++++++|.+..+ |+|+|+|||++..++. ||||++|++|+++++|++.++.
T Consensus 487 R~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~~le~-~drIivl~~Gkiie~G~~~~Ll 560 (573)
T COG4987 487 RALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLRGLER-MDRIIVLDNGKIIEEGTHAELL 560 (573)
T ss_pred HHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccccHhh-cCEEEEEECCeeeecCCHHhhh
Confidence 999999999999999999999999999999987654 8999999999999875 9999999999999999988764
No 327
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.8e-41 Score=382.68 Aligned_cols=212 Identities=22% Similarity=0.346 Sum_probs=181.1
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. ++++|+|+||+|++|+.+||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++
T Consensus 473 ~I~~~~vsf~y~~---~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 549 (708)
T TIGR01193 473 DIVINDVSYSYGY---GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQF 549 (708)
T ss_pred cEEEEEEEEEcCC---CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHh
Confidence 5899999999962 4579999999999999999999999999999999999999999999999999865 45677889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-----------CccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-----------HYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGqkqrv~la 489 (566)
||||||++.+|+. |++||+.++... ..+ .+.+.++++..++. .........||||||||++||
T Consensus 550 i~~v~Q~~~lf~g-TI~eNi~l~~~~-~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialA 623 (708)
T TIGR01193 550 INYLPQEPYIFSG-SILENLLLGAKE-NVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALA 623 (708)
T ss_pred eEEEecCceehhH-HHHHHHhccCCC-CCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHH
Confidence 9999999999886 999999875211 112 22344555554442 223345568999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||++++|++|||||||++||+.+.+.+++.|.++ +|+|+|+|||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 624 Rall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~~~~-~~D~i~~l~~G~i~~~G~~~~L~ 696 (708)
T TIGR01193 624 RALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLSVAK-QSDKIIVLDHGKIIEQGSHDELL 696 (708)
T ss_pred HHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchHHHH-cCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999875 4799999999998875 59999999999999999988764
No 328
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=1.1e-40 Score=331.20 Aligned_cols=180 Identities=26% Similarity=0.391 Sum_probs=157.7
Q ss_pred ceeeeeeEEEe-----CCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCC
Q psy7366 360 PAVNQISFGVG-----RGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRL 434 (566)
Q Consensus 360 ~~l~~isl~i~-----~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~ 434 (566)
..+++++|++. +||+++|+||||||||||+++|+|+++|++|+|.++|. .++|++|++..++.+
T Consensus 8 ~~~~~~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~p~~G~i~~~g~-----------~i~~~~q~~~~~~~~ 76 (246)
T cd03237 8 KTLGEFTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELD-----------TVSYKPQYIKADYEG 76 (246)
T ss_pred cccCcEEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCc-----------eEEEecccccCCCCC
Confidence 35666777765 79999999999999999999999999999999999984 499999998877778
Q ss_pred CHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHH
Q psy7366 435 TPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARR 514 (566)
Q Consensus 435 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~ 514 (566)
|+.||+.+...... . ......++++.+++.+..++++.+|||||||||+|||||+.+|+++||||||++||+.++.
T Consensus 77 tv~e~l~~~~~~~~--~--~~~~~~~~l~~l~l~~~~~~~~~~LSgGe~qrv~iaraL~~~p~llllDEPt~~LD~~~~~ 152 (246)
T cd03237 77 TVRDLLSSITKDFY--T--HPYFKTEIAKPLQIEQILDREVPELSGGELQRVAIAACLSKDADIYLLDEPSAYLDVEQRL 152 (246)
T ss_pred CHHHHHHHHhhhcc--c--cHHHHHHHHHHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 99999876432111 1 1223567899999988889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 515 FLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 515 ~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
.+.++|++++++ |+|||++|||++++..+||++++|+++.
T Consensus 153 ~l~~~l~~~~~~~~~tiiivsHd~~~~~~~~d~i~~l~~~~ 193 (246)
T cd03237 153 MASKVIRRFAENNEKTAFVVEHDIIMIDYLADRLIVFEGEP 193 (246)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEcCCC
Confidence 999999998764 8999999999999999999999997654
No 329
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.5e-40 Score=311.19 Aligned_cols=164 Identities=25% Similarity=0.328 Sum_probs=147.9
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+. ++.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|. ++++
T Consensus 1 i~~~~~~~~~~~---~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~----------~~i~ 67 (166)
T cd03223 1 IELENLSLATPD---GRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG----------EDLL 67 (166)
T ss_pred CEEEEEEEEcCC---CCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC----------ceEE
Confidence 468899999952 356999999999999999999999999999999999999999999999873 3699
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|++|++.++ ..|+.||+.+. ++.+||||||||++|||||+.+|++||||
T Consensus 68 ~~~q~~~~~-~~tv~~nl~~~------------------------------~~~~LS~G~~~rv~laral~~~p~~lllD 116 (166)
T cd03223 68 FLPQRPYLP-LGTLREQLIYP------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLD 116 (166)
T ss_pred EECCCCccc-cccHHHHhhcc------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 999998765 57999998642 46899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
|||+|||+.+++.+.++|+++ +.|+|++|||.+.. .+||++++|+++.
T Consensus 117 EPt~~LD~~~~~~l~~~l~~~---~~tiiivsh~~~~~-~~~d~i~~l~~~~ 164 (166)
T cd03223 117 EATSALDEESEDRLYQLLKEL---GITVISVGHRPSLW-KFHDRVLDLDGEG 164 (166)
T ss_pred CCccccCHHHHHHHHHHHHHh---CCEEEEEeCChhHH-hhCCEEEEEcCCC
Confidence 999999999999999999876 68999999999875 6899999998764
No 330
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.6e-40 Score=367.53 Aligned_cols=206 Identities=25% Similarity=0.365 Sum_probs=176.8
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
.+++++|+++.|+. ++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+++. ..
T Consensus 3 ~~i~~~nls~~~~~---~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~----------~~ 69 (552)
T TIGR03719 3 YIYTMNRVSKVVPP---KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPG----------IK 69 (552)
T ss_pred EEEEEeeEEEecCC---CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC----------CE
Confidence 36899999999951 357999999999999999999999999999999999999999999998752 36
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHh-c-------------CCCchH----------------------HHHHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRV-R-------------NVPSVL----------------------LNTIVNESLNK 464 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~-~-------------~~~~~~----------------------~~~~~~~~l~~ 464 (566)
|||+||++.+++++|+.||+.+.... . ..+... ...++.++++.
T Consensus 70 i~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (552)
T TIGR03719 70 VGYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDA 149 (552)
T ss_pred EEEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhh
Confidence 99999999999999999999864210 0 011110 12346677888
Q ss_pred cCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhC
Q psy7366 465 FALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALC 544 (566)
Q Consensus 465 ~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~ 544 (566)
+++.. .++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+|
T Consensus 150 ~~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~---~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 150 LRCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY---PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred CCCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC---CCeEEEEeCCHHHHHhhc
Confidence 88854 68899999999999999999999999999999999999999999999999876 469999999999999999
Q ss_pred CEEEEEECCEEE-EecCccc
Q psy7366 545 TKLTIMVNGQFT-CLGSATH 563 (566)
Q Consensus 545 drv~~l~~G~i~-~~g~~~~ 563 (566)
|++++|++|+++ +.|+.++
T Consensus 226 d~v~~l~~g~i~~~~g~~~~ 245 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSS 245 (552)
T ss_pred CeEEEEECCEEEEecCCHHH
Confidence 999999999976 6777664
No 331
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2e-40 Score=369.04 Aligned_cols=216 Identities=22% Similarity=0.318 Sum_probs=180.7
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++.
T Consensus 334 ~i~~~~v~~~y~~---~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 410 (585)
T TIGR01192 334 AVEFRHITFEFAN---SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKS 410 (585)
T ss_pred eEEEEEEEEECCC---CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhh
Confidence 5999999999963 3568999999999999999999999999999999999999999999999998865 44567888
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHH-----HHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHc
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV-----NESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~ 493 (566)
++|+||++.+|+ .|++||+.++.. ....++..+.+ .+.+..+ |++.........||||||||++|||||+
T Consensus 411 i~~v~q~~~lf~-~ti~~Ni~~~~~--~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall 487 (585)
T TIGR01192 411 IATVFQDAGLFN-RSIRENIRLGRE--GATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAIL 487 (585)
T ss_pred eEEEccCCccCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHh
Confidence 999999999887 599999987521 11222211111 1222222 3444456677899999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
.+|++|||||||++||+.+.+.+.+.|.++. +++|+|++||+++.+. .||++++|++|++++.|+.+++.
T Consensus 488 ~~p~ililDEpts~LD~~~~~~i~~~l~~~~-~~~tvI~isH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 557 (585)
T TIGR01192 488 KNAPILVLDEATSALDVETEARVKNAIDALR-KNRTTFIIAHRLSTVR-NADLVLFLDQGRLIEKGSFQELI 557 (585)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHh-CCCEEEEEEcChHHHH-cCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999998874 4899999999999985 49999999999999999988763
No 332
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2e-40 Score=370.16 Aligned_cols=212 Identities=23% Similarity=0.388 Sum_probs=179.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|+++.|+. ++++|+|+||++++||+++|+|+||||||||+|+|+|+++|++|+|.++|.++.. ....++++
T Consensus 334 ~I~~~~vsf~y~~---~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~ 410 (588)
T PRK13657 334 AVEFDDVSFSYDN---SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRN 410 (588)
T ss_pred eEEEEEEEEEeCC---CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhh
Confidence 5999999999962 3569999999999999999999999999999999999999999999999999876 45667889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCC-----------CCccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFAL-----------GHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgGqkqrv~la 489 (566)
|+|+||++.+|++ |++||+.++.. ...+ +.+.++++..++ +.........||||||||++||
T Consensus 411 i~~v~Q~~~lf~~-Ti~~Ni~~~~~--~~~d----~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialA 483 (588)
T PRK13657 411 IAVVFQDAGLFNR-SIEDNIRVGRP--DATD----EEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIA 483 (588)
T ss_pred eEEEecCcccccc-cHHHHHhcCCC--CCCH----HHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHH
Confidence 9999999999875 99999987521 1122 223444444443 2222334557999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|++|||||||++||+.+.+.+++.|.++. .++|+|+|||+.+.+. .||++++|++|++++.|+.+++.
T Consensus 484 Rall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~-~~~tvIiitHr~~~~~-~~D~ii~l~~G~i~~~g~~~~l~ 557 (588)
T PRK13657 484 RALLKDPPILILDEATSALDVETEAKVKAALDELM-KGRTTFIIAHRLSTVR-NADRILVFDNGRVVESGSFDELV 557 (588)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-cCCEEEEEEecHHHHH-hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999998874 4799999999998875 59999999999999999987763
No 333
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.5e-40 Score=331.20 Aligned_cols=225 Identities=25% Similarity=0.363 Sum_probs=199.3
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC-----CccEEEEcCccCCC-c
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP-----TSGNAYVMNHSIRD-S 413 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~-----~~G~i~~~g~~~~~-~ 413 (566)
...|.++|++..|....+...++++|||+|++||.+||+|.+|||||-..+.|+|+++. .+|+|.++|+++-. +
T Consensus 4 ~~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~s 83 (534)
T COG4172 4 MPLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAAS 83 (534)
T ss_pred CcceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCC
Confidence 34799999999997655677899999999999999999999999999999999999874 37899999999843 2
Q ss_pred h---HHhc-CceEEEecCC--CCCCCCCHHHHHHHHHHh-cCCCchHHHHHHHHHHHHcCCCC---ccccCcCcCChhHH
Q psy7366 414 M---DLVR-SYIGYCPQFD--ALNDRLTPREHLEFYSRV-RNVPSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNK 483 (566)
Q Consensus 414 ~---~~~~-~~i~~v~q~~--~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~---~~~~~~~~LSgGqk 483 (566)
. +.+| .+|+++||+| ++.|-.|+...+.-..++ ++......++++.++|+.+|+.+ .++.+|++||||||
T Consensus 84 e~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqR 163 (534)
T COG4172 84 ERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYPHELSGGQR 163 (534)
T ss_pred HHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchh
Confidence 2 2233 6899999998 478888998877665554 46677788889999999999964 56899999999999
Q ss_pred HHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcc
Q psy7366 484 RKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSAT 562 (566)
Q Consensus 484 qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~ 562 (566)
|||+||+||+.+|++||.||||++||...+.+|+++|++++++ |.++++||||+..+.+++|||+||.+|++++.|+.+
T Consensus 164 QRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t~ 243 (534)
T COG4172 164 QRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVETGTTE 243 (534)
T ss_pred hHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcHH
Confidence 9999999999999999999999999999999999999999877 999999999999999999999999999999999877
Q ss_pred cc
Q psy7366 563 HL 564 (566)
Q Consensus 563 ~l 564 (566)
++
T Consensus 244 ~l 245 (534)
T COG4172 244 TL 245 (534)
T ss_pred HH
Confidence 54
No 334
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.8e-40 Score=331.68 Aligned_cols=198 Identities=22% Similarity=0.347 Sum_probs=164.2
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcC
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRS 419 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 419 (566)
...|+++|+++. .+.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 37 ~~~l~i~nls~~------~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 37 DNNLFFSNLCLV------GAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCeEEEEEEEEe------cccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 456999999984 24699999999999999999999999999999999999999999999987
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHH
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~l 488 (566)
.++|++|++.+++. |+.||+.+.... .. ..+.+.++.+++.+ ..++++.+||||||||++|
T Consensus 99 ~i~yv~q~~~l~~~-tv~enl~~~~~~---~~----~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~l 170 (282)
T cd03291 99 RISFSSQFSWIMPG-TIKENIIFGVSY---DE----YRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISL 170 (282)
T ss_pred EEEEEeCccccccc-CHHHHhhccccc---CH----HHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHH
Confidence 39999999988875 999999764211 11 11122333333321 2345578999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHH-HHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCI-ERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l-~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||||+.+|++|||||||+|||+.++..+.+.+ +.+. ++.|||++|||++++. .||++++|++|++++.|+++++.
T Consensus 171 AraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~-~~~tIiiisH~~~~~~-~~d~i~~l~~G~i~~~g~~~~~~ 246 (282)
T cd03291 171 ARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLM-ANKTRILVTSKMEHLK-KADKILILHEGSSYFYGTFSELQ 246 (282)
T ss_pred HHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhh-CCCEEEEEeCChHHHH-hCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999998865 5554 4799999999999985 79999999999999999887653
No 335
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1e-40 Score=371.71 Aligned_cols=213 Identities=23% Similarity=0.414 Sum_probs=181.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+.. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ....++++
T Consensus 330 ~i~~~~v~f~y~~~--~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~ 407 (571)
T TIGR02203 330 DVEFRNVTFRYPGR--DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQ 407 (571)
T ss_pred eEEEEEEEEEcCCC--CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhh
Confidence 59999999999632 3579999999999999999999999999999999999999999999999998865 45567889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-------cc----cCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-------SD----REVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~----~~~~~LSgGqkqrv~la 489 (566)
++|+||++.+|+. |++||+.++. ++...++.+.++++.+++.+. +| .....||||||||++||
T Consensus 408 i~~v~Q~~~lf~~-Ti~~Ni~~~~-----~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLA 481 (571)
T TIGR02203 408 VALVSQDVVLFND-TIANNIAYGR-----TEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIA 481 (571)
T ss_pred ceEEccCcccccc-cHHHHHhcCC-----CCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHH
Confidence 9999999999876 9999998652 101123445666666665322 22 23357999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||++.+|++|||||||++||+.+.+.+++.|.++. +++|+|+|||+.+.+ ..||+|++|++|++++.|+.+++
T Consensus 482 Rall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~~~-~~~D~ii~l~~g~i~~~g~~~~l 554 (571)
T TIGR02203 482 RALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLSTI-EKADRIVVMDDGRIVERGTHNEL 554 (571)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhHHH-HhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999998874 479999999999776 56999999999999999998876
No 336
>KOG0059|consensus
Probab=100.00 E-value=5.1e-40 Score=378.64 Aligned_cols=223 Identities=56% Similarity=0.946 Sum_probs=210.1
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc--hHHh
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS--MDLV 417 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~--~~~~ 417 (566)
.+.+.++|+++.|+.. +.+++++||.|++|||.|++|+|||||||++|+|.|..+|++|+++++|.++... ....
T Consensus 562 ~~~~~~~~L~k~y~~~---~~Av~~ls~~V~~gecfgLLG~NGAGKtT~f~mltG~~~~t~G~a~i~g~~i~~~~~~~~~ 638 (885)
T KOG0059|consen 562 SSALVLNNLSKVYGGK---DGAVRGLSFAVPPGECFGLLGVNGAGKTTTFKMLTGETKPTSGEALIKGHDITVSTDFQQV 638 (885)
T ss_pred cceEEEcceeeeecch---hhhhcceEEEecCCceEEEecCCCCCchhhHHHHhCCccCCcceEEEecCccccccchhhh
Confidence 3689999999999742 1289999999999999999999999999999999999999999999999998763 3347
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCC
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPP 497 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~ 497 (566)
++.+||+||+..+++.+|.+|++.+++++++++.....+.++.+++.++|.+..+++++.+|||+|+|+.+|.|++.+|+
T Consensus 639 ~~~iGyCPQ~d~l~~~lT~rEhL~~~arlrG~~~~di~~~v~~ll~~~~L~~~~~~~~~~ySgG~kRkLs~aialig~p~ 718 (885)
T KOG0059|consen 639 RKQLGYCPQFDALWEELTGREHLEFYARLRGLPRSDIGSAIEKLLRLVGLGPYANKQVRTYSGGNKRRLSFAIALIGDPS 718 (885)
T ss_pred hhhcccCCchhhhhhhccHHHHHHHHHHHcCCChhHHHHHHHHHHHHcCChhhhccchhhCCCcchhhHHHHHHHhcCCC
Confidence 88999999999999999999999999999999988888889999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 498 LIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 498 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
+++|||||+|+||.+|+.+|+++.+++++|++||++||.++|++.+|||+.+|.+|++.+.|++++++
T Consensus 719 vi~LDEPstGmDP~arr~lW~ii~~~~k~g~aiiLTSHsMeE~EaLCtR~aImv~G~l~ciGs~q~LK 786 (885)
T KOG0059|consen 719 VILLDEPSTGLDPKARRHLWDIIARLRKNGKAIILTSHSMEEAEALCTRTAIMVIGQLRCIGSPQELK 786 (885)
T ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHhhhhheeecCeeEEecChHHHH
Confidence 99999999999999999999999999988779999999999999999999999999999999999886
No 337
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional
Probab=100.00 E-value=4.5e-40 Score=320.36 Aligned_cols=189 Identities=19% Similarity=0.212 Sum_probs=161.0
Q ss_pred ceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEE-EcCccCCCchHHhcCceEEEecCCCCCCCCCHHH
Q psy7366 360 PAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAY-VMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPRE 438 (566)
Q Consensus 360 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~-~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e 438 (566)
++|+|+||+|++|++++|+||||||||||+|+|+|+++|++|+|. ++|..+ .+.+.+.+++.+|+.|
T Consensus 1 ~vl~~vs~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~sG~i~~~~~~~~------------~~~~~~~l~~~ltv~e 68 (213)
T PRK15177 1 VVLDKTDFVMGYHEHIGILAAPGSGKTTLTRLLCGLDAPDEGDFIGLRGDAL------------PLGANSFILPGLTGEE 68 (213)
T ss_pred CeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCccCCCCCEEEecCcee------------ccccccccCCcCcHHH
Confidence 379999999999999999999999999999999999999999997 776432 1234566888999999
Q ss_pred HHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHH
Q psy7366 439 HLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWT 518 (566)
Q Consensus 439 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~ 518 (566)
|+.+....++...... ...+.+.+++....++++.+||+|||||++|||||+.+|+++||||||+++|+.++..+.+
T Consensus 69 nl~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~lS~G~~qrv~la~al~~~p~llllDEP~~~lD~~~~~~~~~ 145 (213)
T PRK15177 69 NARMMASLYGLDGDEF---SHFCYQLTQLEQCYTDRVSEYSVTMKTHLAFAINLLLPCRLYIADGKLYTGDNATQLRMQA 145 (213)
T ss_pred HHHHHHHHcCCCHHHH---HHHHHHHhChhHHhhchHhhcCHHHHHHHHHHHHHhcCCCEEEECCCCccCCHHHHHHHHH
Confidence 9988766544433222 2334456778777889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 519 CIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 519 ~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.+.+..+ +.++|++||+++++..+||++++|++|++++.++.++.
T Consensus 146 ~l~~~~~-~~~ii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 190 (213)
T PRK15177 146 ALACQLQ-QKGLIVLTHNPRLIKEHCHAFGVLLHGKITMCEDLAQA 190 (213)
T ss_pred HHHHHhh-CCcEEEEECCHHHHHHhcCeeEEEECCeEEEeCCHHHH
Confidence 8865433 46899999999999999999999999999999987765
No 338
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.8e-40 Score=365.26 Aligned_cols=213 Identities=21% Similarity=0.325 Sum_probs=180.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. +++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++.
T Consensus 313 ~I~~~~v~~~y~~--~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~ 390 (569)
T PRK10789 313 ELDVNIRQFTYPQ--TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSR 390 (569)
T ss_pred cEEEEEEEEECCC--CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhh
Confidence 4899999999963 23579999999999999999999999999999999999999999999999998865 44567888
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCC-----------CCccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFAL-----------GHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgGqkqrv~la 489 (566)
++|+||++.+|+. |++||+.++.. .... +.+.++++..++ +...+.....||||||||++||
T Consensus 391 i~~v~q~~~lf~~-ti~~Ni~~~~~--~~~~----~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lA 463 (569)
T PRK10789 391 LAVVSQTPFLFSD-TVANNIALGRP--DATQ----QEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIA 463 (569)
T ss_pred eEEEccCCeeccc-cHHHHHhcCCC--CCCH----HHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHH
Confidence 9999999999876 99999986421 1111 223444444443 2233455678999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+. .||++++|++|++++.|+.+++.
T Consensus 464 Rall~~~~illlDEpts~LD~~~~~~i~~~l~~~~-~~~tii~itH~~~~~~-~~d~i~~l~~G~i~~~g~~~~l~ 537 (569)
T PRK10789 464 RALLLNAEILILDDALSAVDGRTEHQILHNLRQWG-EGRTVIISAHRLSALT-EASEILVMQHGHIAQRGNHDQLA 537 (569)
T ss_pred HHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchhHHH-cCCEEEEEeCCEEEEecCHHHHH
Confidence 99999999999999999999999999999999874 5899999999998875 59999999999999999987763
No 339
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=8e-40 Score=311.63 Aligned_cols=195 Identities=26% Similarity=0.420 Sum_probs=182.5
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecC-CCCCCCCCH
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQF-DALNDRLTP 436 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~-~~l~~~~tv 436 (566)
..++|+||||++++||.+||+|+||||||||||+|+|.++|++|+|.++|+ ++++..- ..+.|++|.
T Consensus 39 ~~~aL~disf~i~~Ge~vGiiG~NGaGKSTLlkliaGi~~Pt~G~v~v~G~------------v~~li~lg~Gf~pelTG 106 (249)
T COG1134 39 EFWALKDISFEIYKGERVGIIGHNGAGKSTLLKLIAGIYKPTSGKVKVTGK------------VAPLIELGAGFDPELTG 106 (249)
T ss_pred eEEEecCceEEEeCCCEEEEECCCCCcHHHHHHHHhCccCCCCceEEEcce------------EehhhhcccCCCcccch
Confidence 456999999999999999999999999999999999999999999999995 4443332 356788999
Q ss_pred HHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHH
Q psy7366 437 REHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFL 516 (566)
Q Consensus 437 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l 516 (566)
+||+.+...+.++..++.+++++++.+.-+|.++.++|+.++|.||+-|+++|.|...+|+|||+||-.+--|+.-++.-
T Consensus 107 reNi~l~~~~~G~~~~ei~~~~~eIieFaELG~fi~~PvktYSSGM~aRLaFsia~~~~pdILllDEvlavGD~~F~~K~ 186 (249)
T COG1134 107 RENIYLRGLILGLTRKEIDEKVDEIIEFAELGDFIDQPVKTYSSGMYARLAFSVATHVEPDILLLDEVLAVGDAAFQEKC 186 (249)
T ss_pred HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhhCchhhccHHHHHHHHHhhhhhcCCCEEEEehhhhcCCHHHHHHH
Confidence 99999998888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 517 WTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 517 ~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.+.++++.+++.|||+||||++.+.++|||+++|++|++...|+++++
T Consensus 187 ~~rl~e~~~~~~tiv~VSHd~~~I~~~Cd~~i~l~~G~i~~~G~~~~v 234 (249)
T COG1134 187 LERLNELVEKNKTIVLVSHDLGAIKQYCDRAIWLEHGQIRMEGSPEEV 234 (249)
T ss_pred HHHHHHHHHcCCEEEEEECCHHHHHHhcCeeEEEeCCEEEEcCCHHHH
Confidence 999999988889999999999999999999999999999999999875
No 340
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.3e-40 Score=376.09 Aligned_cols=213 Identities=23% Similarity=0.409 Sum_probs=182.0
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|+++.|+. +.+.+|+|+||+|++|+.++|+|+||||||||+|+|+|+++|++|+|.++|.++.. ....+|+.
T Consensus 455 ~i~~~~vsf~y~~--~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~ 532 (694)
T TIGR01846 455 AITFENIRFRYAP--DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQ 532 (694)
T ss_pred eEEEEEEEEEcCC--CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHh
Confidence 5999999999963 23569999999999999999999999999999999999999999999999999876 45667889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcC-----------CCCccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFA-----------LGHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgGqkqrv~la 489 (566)
++||||++.+|+. |++||+.+... ..+. +.+.++++..+ ++........+||||||||++||
T Consensus 533 i~~v~q~~~lf~~-ti~eNi~~~~~--~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lA 605 (694)
T TIGR01846 533 MGVVLQENVLFSR-SIRDNIALCNP--GAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIA 605 (694)
T ss_pred CeEEccCCeehhh-hHHHHHhcCCC--CCCH----HHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHH
Confidence 9999999998875 99999986421 1112 22334444433 34344455678999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 606 Rall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~~-~d~ii~l~~G~i~~~g~~~~l~ 679 (694)
T TIGR01846 606 RALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLSTVRA-CDRIIVLEKGQIAESGRHEELL 679 (694)
T ss_pred HHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChHHHHh-CCEEEEEeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999874 57999999999998865 9999999999999999988763
No 341
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.7e-40 Score=367.50 Aligned_cols=213 Identities=23% Similarity=0.412 Sum_probs=180.4
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+.. .++.+|+|+||+|++||.++|+|+||||||||+|+|+|+++|++|+|.++|.++.. ....+++.
T Consensus 337 ~i~~~~v~f~y~~~-~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~ 415 (576)
T TIGR02204 337 EIEFEQVNFAYPAR-PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRAR 415 (576)
T ss_pred eEEEEEEEEECCCC-CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHh
Confidence 58999999999632 12579999999999999999999999999999999999999999999999998865 45567788
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-----------CccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-----------HYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGqkqrv~la 489 (566)
++|+||++.+|++ |++||+.++.. ..+ .+.+.++++..++. .........||||||||++||
T Consensus 416 i~~~~Q~~~lf~~-Ti~~Ni~~~~~--~~~----~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~la 488 (576)
T TIGR02204 416 MALVPQDPVLFAA-SVMENIRYGRP--DAT----DEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIA 488 (576)
T ss_pred ceEEccCCccccc-cHHHHHhcCCC--CCC----HHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHH
Confidence 9999999998876 99999986421 111 23344555555542 222344567999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
||++.+|++|||||||++||+.+.+.+++.|+++. +++|+|++||+++.+. .||++++|++|++++.|+++++
T Consensus 489 Ral~~~~~ililDEpts~lD~~~~~~i~~~l~~~~-~~~t~IiitH~~~~~~-~~d~vi~l~~g~~~~~g~~~~l 561 (576)
T TIGR02204 489 RAILKDAPILLLDEATSALDAESEQLVQQALETLM-KGRTTLIIAHRLATVL-KADRIVVMDQGRIVAQGTHAEL 561 (576)
T ss_pred HHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh-CCCEEEEEecchHHHH-hCCEEEEEECCEEEeeecHHHH
Confidence 99999999999999999999999999999999874 4799999999998875 5999999999999999998765
No 342
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=4.5e-40 Score=328.15 Aligned_cols=203 Identities=22% Similarity=0.347 Sum_probs=171.3
Q ss_pred eeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEE-----------EcCccCCCch
Q psy7366 346 KRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAY-----------VMNHSIRDSM 414 (566)
Q Consensus 346 ~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~-----------~~g~~~~~~~ 414 (566)
.|++++|+. .+.+|+|+|+ +++||+++|+||||||||||+|+|+|+++|++|+|+ ++|.++....
T Consensus 4 ~~~~~~y~~---~~~~l~~i~~-i~~Ge~~~IvG~nGsGKSTLlk~l~Gl~~p~~G~I~~~~~~~~~~~~~~g~~~~~~~ 79 (255)
T cd03236 4 DEPVHRYGP---NSFKLHRLPV-PREGQVLGLVGPNGIGKSTALKILAGKLKPNLGKFDDPPDWDEILDEFRGSELQNYF 79 (255)
T ss_pred cCcceeecC---cchhhhcCCC-CCCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEeeccccchhhhhccCchhhhhh
Confidence 368889962 3358999995 999999999999999999999999999999999996 7787764422
Q ss_pred HH-h--cCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHH
Q psy7366 415 DL-V--RSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 415 ~~-~--~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 491 (566)
.. . ...++|++|+..+++. ++.+++.+.. ........+.++++.+++.+..++++.+||||||||++||||
T Consensus 80 ~~~~~~~~~i~~~~~~~~~~~~-~~~~~i~~~l-----~~~~~~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lara 153 (255)
T cd03236 80 TKLLEGDVKVIVKPQYVDLIPK-AVKGKVGELL-----KKKDERGKLDELVDQLELRHVLDRNIDQLSGGELQRVAIAAA 153 (255)
T ss_pred HHhhhcccceeeecchhccCch-HHHHHHHHHh-----chhHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHH
Confidence 22 1 1247999999877774 7778776532 122334567899999999988899999999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
|+.+|+++||||||++||+.++..+.++|++++++++|||++|||++++..+||++++|+ |++.+.|
T Consensus 154 l~~~p~illlDEPts~LD~~~~~~l~~~l~~l~~~~~tIIiiSHd~~~~~~~ad~i~~l~-~~~~~~~ 220 (255)
T cd03236 154 LARDADFYFFDEPSSYLDIKQRLNAARLIRELAEDDNYVLVVEHDLAVLDYLSDYIHCLY-GEPGAYG 220 (255)
T ss_pred HHhCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEC-CCCCcce
Confidence 999999999999999999999999999999998778999999999999999999999995 5565433
No 343
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=9e-40 Score=365.20 Aligned_cols=205 Identities=31% Similarity=0.428 Sum_probs=184.8
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---ccEEEEcCccCCCchHHhcCceEEEecCCCCCCCC
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT---SGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRL 434 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~ 434 (566)
++++|+|+|++|++||+++|+|||||||||||++|+|..+|. +|+|.++|.++.. ...++.+||++|++.+++.+
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~--~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDA--KEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCH--HHHhhhceeeccccccCccC
Confidence 577999999999999999999999999999999999999885 7999999998753 34567899999999999999
Q ss_pred CHHHHHHHHHHhcC---CCchHHHHHHHHHHHHcCCCCccccCcC------cCChhHHHHHHHHHHHcCCCCEEEEeCCC
Q psy7366 435 TPREHLEFYSRVRN---VPSVLLNTIVNESLNKFALGHYSDREVR------TLSGGNKRKLSTAIALLGNPPLIFLDEPT 505 (566)
Q Consensus 435 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~------~LSgGqkqrv~la~al~~~p~lllLDEPt 505 (566)
||+||+.|....+. ....+..++++++++.+++.+..|+.++ .|||||||||+||++|+.+|++|+|||||
T Consensus 115 TV~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPt 194 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPT 194 (617)
T ss_pred cHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCC
Confidence 99999998776532 2334455678999999999888888876 49999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHH-HHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 506 SGMDPGARRFLWTCIERAVSEGRCVILTSHNME-ECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 506 ~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~-~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|||+.+...+++.|++++++|+|||+++|++. ++.++||++++|++|++++.|+++++
T Consensus 195 sgLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~G~~v~~G~~~~~ 254 (617)
T TIGR00955 195 SGLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAEGRVAYLGSPDQA 254 (617)
T ss_pred cchhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeCCeEEEECCHHHH
Confidence 999999999999999999888999999999995 78889999999999999999998875
No 344
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-40 Score=311.64 Aligned_cols=180 Identities=26% Similarity=0.395 Sum_probs=164.8
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc---ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID---KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNES 74 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~---~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~ 74 (566)
+|||||+|||+.++-|++ .+.+.+.... ..+++||||-|...|||.+||.||+++.....++++.+++++++++
T Consensus 38 sGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~EL 117 (309)
T COG1125 38 SGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADEL 117 (309)
T ss_pred CcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHH
Confidence 599999999999998877 3444432221 3456899999999999999999999999999999999999999999
Q ss_pred HHHcCCCc--ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChh
Q psy7366 75 LNKFALGH--YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNME 151 (566)
Q Consensus 75 l~~~gl~~--~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~ 151 (566)
++.+||+. ..+|++++|||||+|||.+||||+.+|+|||||||+++|||.+|..+.+.++++.++ |+||||+|||++
T Consensus 118 l~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid 197 (309)
T COG1125 118 LDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID 197 (309)
T ss_pred HHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH
Confidence 99999984 689999999999999999999999999999999999999999999999999999665 999999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
|+..++|||++|++|+++..++|+++..+
T Consensus 198 EA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 198 EALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred HHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 99999999999999999999999998754
No 345
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-39 Score=360.55 Aligned_cols=203 Identities=20% Similarity=0.277 Sum_probs=169.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+|.++||+++|+ ++.+|+|+||+|.+|+++||+||||||||||||+|+|+++|++|+|.++|.. .+
T Consensus 1 ~i~i~nls~~~g----~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~----------~i 66 (638)
T PRK10636 1 MIVFSSLQIRRG----VRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNW----------QL 66 (638)
T ss_pred CEEEEEEEEEeC----CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCC----------EE
Confidence 478999999997 5679999999999999999999999999999999999999999999998843 48
Q ss_pred EEEecCCCCCCCCCHHHHHHHH-----------------------HHhc----CCCchHHHHHHHHHHHHcCCC-Ccccc
Q psy7366 422 GYCPQFDALNDRLTPREHLEFY-----------------------SRVR----NVPSVLLNTIVNESLNKFALG-HYSDR 473 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~-----------------------~~~~----~~~~~~~~~~~~~~l~~~~l~-~~~~~ 473 (566)
+|++|++..+ ..++.+++.-. .... .........++.++++.+|+. ...++
T Consensus 67 ~~~~q~~~~~-~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~ 145 (638)
T PRK10636 67 AWVNQETPAL-PQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLER 145 (638)
T ss_pred EEEecCCCCC-CCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcC
Confidence 8999864332 24655544210 0000 001112345678899999997 57899
Q ss_pred CcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECC
Q psy7366 474 EVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNG 553 (566)
Q Consensus 474 ~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G 553 (566)
++.+|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|
T Consensus 146 ~~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~---~~tviivsHd~~~l~~~~d~i~~L~~G 222 (638)
T PRK10636 146 PVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSY---QGTLILISHDRDFLDPIVDKIIHIEQQ 222 (638)
T ss_pred chhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhC---CCeEEEEeCCHHHHHHhcCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999988776 579999999999999999999999999
Q ss_pred EEE-EecCcc
Q psy7366 554 QFT-CLGSAT 562 (566)
Q Consensus 554 ~i~-~~g~~~ 562 (566)
++. +.|+.+
T Consensus 223 ~i~~~~g~~~ 232 (638)
T PRK10636 223 SLFEYTGNYS 232 (638)
T ss_pred EEEEecCCHH
Confidence 996 456544
No 346
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=5.8e-39 Score=355.16 Aligned_cols=204 Identities=25% Similarity=0.310 Sum_probs=174.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+. +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. ....++++
T Consensus 322 ~i~~~~v~f~y~~---~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~ 398 (547)
T PRK10522 322 TLELRNVTFAYQD---NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKL 398 (547)
T ss_pred eEEEEEEEEEeCC---CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhh
Confidence 5999999999962 3569999999999999999999999999999999999999999999999999875 45567889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccC-----cCcCChhHHHHHHHHHHHcCC
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDRE-----VRTLSGGNKRKLSTAIALLGN 495 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGqkqrv~la~al~~~ 495 (566)
++|++|++.+|+. |+++| . ....++.+.+.++.+++....+.. ..+||||||||++||||++.+
T Consensus 399 i~~v~q~~~lf~~-ti~~n---~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~LSgGq~qRl~lARal~~~ 467 (547)
T PRK10522 399 FSAVFTDFHLFDQ-LLGPE---G-------KPANPALVEKWLERLKMAHKLELEDGRISNLKLSKGQKKRLALLLALAEE 467 (547)
T ss_pred eEEEecChhHHHH-hhccc---c-------CchHHHHHHHHHHHcCCchhhhccccCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999988875 78776 1 012234567888888886543322 358999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecC
Q psy7366 496 PPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGS 560 (566)
Q Consensus 496 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~ 560 (566)
|++|||||||++||+.+.+.+.+.+.+..+ .++|+|++||+++.+. .||++++|++|++++...
T Consensus 468 ~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~-~~d~i~~l~~G~i~e~~~ 532 (547)
T PRK10522 468 RDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFI-HADRLLEMRNGQLSELTG 532 (547)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHH-hCCEEEEEECCEEEEecC
Confidence 999999999999999999999999876543 5899999999997754 699999999999988743
No 347
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=318.32 Aligned_cols=180 Identities=26% Similarity=0.361 Sum_probs=165.0
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc------cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI------DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~------~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++++-.|++ .++|..... ...++.|||+||++.|....||++|++|+.+..+.++.++++|+
T Consensus 43 AGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV 122 (339)
T COG1135 43 AGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRV 122 (339)
T ss_pred CcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHH
Confidence 499999999999998887 344422111 12356899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCCh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM 150 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~ 150 (566)
.++|+.+||++..++++.+|||||||||+|||||+.+|+|||.|||||+|||++.+.+.++|+++.++ |.||++|||.|
T Consensus 123 ~elLelVgL~dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm 202 (339)
T COG1135 123 AELLELVGLSDKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEM 202 (339)
T ss_pred HHHHHHcCChhhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechH
Confidence 99999999999999999999999999999999999999999999999999999999999999999665 99999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+.+.++||||+||++|++++.|+..++...
T Consensus 203 ~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~ 232 (339)
T COG1135 203 EVVKRICDRVAVLDQGRLVEEGTVSEVFAN 232 (339)
T ss_pred HHHHHHhhhheEeeCCEEEEeccHHHhhcC
Confidence 999999999999999999999999998754
No 348
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=9.8e-39 Score=353.56 Aligned_cols=207 Identities=20% Similarity=0.273 Sum_probs=175.3
Q ss_pred eEEEeeeEEEeCCcCC-CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 342 VLVVKRLFKIYANSKG-TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~-~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
.++++|++++|+...+ .+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. ....+++
T Consensus 337 ~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~ 416 (555)
T TIGR01194 337 SIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRD 416 (555)
T ss_pred eEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHh
Confidence 5899999999973211 2369999999999999999999999999999999999999999999999999875 4456778
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccC------cCcCChhHHHHHHHHHHHc
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDRE------VRTLSGGNKRKLSTAIALL 493 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~LSgGqkqrv~la~al~ 493 (566)
.++|++|++.+|++ |+++|.. +...++.+.++++.+++.+..+.. ...||||||||++||||++
T Consensus 417 ~i~~v~q~~~lf~~-ti~~n~~---------~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~~~LSgGq~qRlalaRall 486 (555)
T TIGR01194 417 LFSAIFADFHLFDD-LIGPDEG---------EHASLDNAQQYLQRLEIADKVKIEDGGFSTTTALSTGQQKRLALICAWL 486 (555)
T ss_pred hCcEEccChhhhhh-hhhcccc---------cchhHHHHHHHHHHcCCchhhcccccccCCcccCCHHHHHHHHHHHHHH
Confidence 89999999988875 8888741 112344577889999987654332 3679999999999999999
Q ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHH-HHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEec
Q psy7366 494 GNPPLIFLDEPTSGMDPGARRFLWTCIE-RAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLG 559 (566)
Q Consensus 494 ~~p~lllLDEPt~gLD~~~~~~l~~~l~-~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g 559 (566)
.+|++|||||||++||+.+.+.+++.+. .+...|+|+|++||+++.+ ..||+|++|++|++++.-
T Consensus 487 ~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~-~~~d~i~~l~~G~i~~~~ 552 (555)
T TIGR01194 487 EDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYF-ELADQIIKLAAGCIVKDT 552 (555)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHH-HhCCEEEEEECCEEEEec
Confidence 9999999999999999999999988654 4555689999999999876 479999999999998753
No 349
>COG1101 PhnK ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.1e-39 Score=298.10 Aligned_cols=219 Identities=24% Similarity=0.372 Sum_probs=184.9
Q ss_pred EEEeeeEEEeCCc-CCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCch-HHhcCc
Q psy7366 343 LVVKRLFKIYANS-KGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSM-DLVRSY 420 (566)
Q Consensus 343 l~~~~l~~~y~~~-~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-~~~~~~ 420 (566)
+.+.|+.+.|.+. ...+++|+++|++|+.|+++.|+|.||||||||+++|+|-++|++|+|.++|.++++.+ ......
T Consensus 2 i~~~~~~~~f~~g~~~ek~~l~~~sL~I~~g~FvtViGsNGAGKSTlln~iaG~l~~t~G~I~Idg~dVtk~~~~~RA~~ 81 (263)
T COG1101 2 ISLSNATKTFFKGTPLEKRALNGLSLEIAEGDFVTVIGSNGAGKSTLLNAIAGDLKPTSGQILIDGVDVTKKSVAKRANL 81 (263)
T ss_pred cccccceeeecCCChhHHHHHhcCceeecCCceEEEEcCCCccHHHHHHHhhCccccCCceEEECceecccCCHHHHhhH
Confidence 4566777766432 23467999999999999999999999999999999999999999999999999998743 334467
Q ss_pred eEEEecCC--CCCCCCCHHHHHHHHHHh---cCCCc---hHHHHHHHHHHHHcCC--CCccccCcCcCChhHHHHHHHHH
Q psy7366 421 IGYCPQFD--ALNDRLTPREHLEFYSRV---RNVPS---VLLNTIVNESLNKFAL--GHYSDREVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 421 i~~v~q~~--~l~~~~tv~e~l~~~~~~---~~~~~---~~~~~~~~~~l~~~~l--~~~~~~~~~~LSgGqkqrv~la~ 490 (566)
++-|||+| ..++.+|+.||+.+.... +++.. ....+...+.+..+++ ++.++.++.-|||||||-+++++
T Consensus 82 larVfQdp~~gt~~~lTieENl~la~~Rg~~rgl~~~ln~~~~~~f~~~l~~l~lgLenrL~~~iglLSGGQRQalsL~M 161 (263)
T COG1101 82 LARVFQDPLAGTAPELTIEENLALAESRGKKRGLSSALNERRRSSFRERLARLGLGLENRLSDRIGLLSGGQRQALSLLM 161 (263)
T ss_pred HHHHhcchhhCCcccccHHHHHHHHHhcCcccccchhhhHHHHHHHHHHHhhcccchhhhhcChhhhccchHHHHHHHHH
Confidence 88999998 479999999999876432 12221 1223445566666654 67889999999999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSA 561 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~ 561 (566)
|.++.|+||+|||-|++|||.....++++-.++.++ +.|.+||||+++.+..|.+|.++|++|+|+.+-+-
T Consensus 162 Atl~~pkiLLLDEHTAALDPkta~~vm~lT~kiV~~~klTtlMVTHnm~~Al~yG~RlImLh~G~IvlDv~g 233 (263)
T COG1101 162 ATLHPPKILLLDEHTAALDPKTAEFVMELTAKIVEEHKLTTLMVTHNMEDALDYGNRLIMLHSGKIVLDVTG 233 (263)
T ss_pred HhcCCCcEEEecchhhcCCcchHHHHHHHHHHHHHhcCCceEEEeccHHHHHhhCCeEEEEeCCeEEEEccc
Confidence 999999999999999999999999999999998766 78999999999999999999999999999987543
No 350
>COG4167 SapF ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.9e-39 Score=289.88 Aligned_cols=224 Identities=25% Similarity=0.358 Sum_probs=194.1
Q ss_pred eEEEeeeEEEeCCcC-----CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hH
Q psy7366 342 VLVVKRLFKIYANSK-----GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MD 415 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~-----~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~ 415 (566)
.++|+|++|.|.... ....+++.|||++++|+.+|++|.||||||||.|+|+|.++|++|+|.++|+++... ..
T Consensus 4 LLeV~nLsKtF~~~~~lf~r~~~~AV~~vSFtL~~~QTlaiIG~NGSGKSTLakMlaGmi~PTsG~il~n~~~L~~~Dy~ 83 (267)
T COG4167 4 LLEVRNLSKTFRYRTGLFRRQTVEAVKPVSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGEILINDHPLHFGDYS 83 (267)
T ss_pred hhhhhhhhhhhhhhhhhhhhhhhhcccceEEEecCCcEEEEEccCCCcHhHHHHHHhcccCCCCceEEECCccccccchH
Confidence 478899998875311 123588999999999999999999999999999999999999999999999998543 23
Q ss_pred HhcCceEEEecCCC--CCCCCCHHHHHHHHHHhc-CCCchHHHHHHHHHHHHcCC-CCccccCcCcCChhHHHHHHHHHH
Q psy7366 416 LVRSYIGYCPQFDA--LNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESLNKFAL-GHYSDREVRTLSGGNKRKLSTAIA 491 (566)
Q Consensus 416 ~~~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l~~~~l-~~~~~~~~~~LSgGqkqrv~la~a 491 (566)
...++|-++||||+ +.|.+.+...+..+.++. .+......+++.+-|..+|| .+..+-+|..||-||||||++|||
T Consensus 84 ~R~k~IRMiFQDpnts~NPRl~iGqiLd~PL~l~T~~~~~~R~~~i~~TL~~VGL~Pdhan~~~~~la~~QKQRVaLARA 163 (267)
T COG4167 84 FRSKRIRMIFQDPNTSLNPRLRIGQILDFPLRLNTDLEPEQRRKQIFETLRMVGLLPDHANYYPHMLAPGQKQRVALARA 163 (267)
T ss_pred hhhhheeeeecCCccccChhhhhhhHhcchhhhcccCChHHHHHHHHHHHHHhccCccccccchhhcCchhHHHHHHHHH
Confidence 33467999999985 677788887777776553 33444455678888999998 467899999999999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|+.+|+|+|.||..++||...+.++.+++-+++++ |.+.|.|+.++-.+..++|.|+||++|++++.|++.++.
T Consensus 164 LIL~P~iIIaDeAl~~LD~smrsQl~NL~LeLQek~GiSyiYV~QhlG~iKHi~D~viVM~EG~vvE~G~t~~v~ 238 (267)
T COG4167 164 LILRPKIIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMIKHISDQVLVMHEGEVVERGSTADVL 238 (267)
T ss_pred HhcCCcEEEehhhhhhccHHHHHHHHHHHHHHHHHhCceEEEEechhhHhhhhcccEEEEecCceeecCChhhhh
Confidence 99999999999999999999999999999999876 999999999999999999999999999999999988763
No 351
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.6e-38 Score=295.01 Aligned_cols=217 Identities=24% Similarity=0.315 Sum_probs=192.5
Q ss_pred eEEEeeeEEEeCCcCCC-cceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC--CCCccEEEEcCccCCC--chHH
Q psy7366 342 VLVVKRLFKIYANSKGT-KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI--KPTSGNAYVMNHSIRD--SMDL 416 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~-~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~--~~~~G~i~~~g~~~~~--~~~~ 416 (566)
+|+++||+.... + +.+|+++||+|++||+.+|+||||||||||.++|+|.- ++++|+|.++|+++.. ...+
T Consensus 3 ~L~I~dLhv~v~----~~keILkgvnL~v~~GEvhaiMGPNGsGKSTLa~~i~G~p~Y~Vt~G~I~~~GedI~~l~~~ER 78 (251)
T COG0396 3 MLEIKDLHVEVE----GKKEILKGVNLTVKEGEVHAIMGPNGSGKSTLAYTIMGHPKYEVTEGEILFDGEDILELSPDER 78 (251)
T ss_pred eeEEeeeEEEec----CchhhhcCcceeEcCCcEEEEECCCCCCHHHHHHHHhCCCCceEecceEEECCcccccCCHhHH
Confidence 689999999886 4 58999999999999999999999999999999999985 6789999999999976 3456
Q ss_pred hcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCC---chHHHHHHHHHHHHcCCCC-ccccCcC-cCChhHHHHHHHHHH
Q psy7366 417 VRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVP---SVLLNTIVNESLNKFALGH-YSDREVR-TLSGGNKRKLSTAIA 491 (566)
Q Consensus 417 ~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~---~~~~~~~~~~~l~~~~l~~-~~~~~~~-~LSgGqkqrv~la~a 491 (566)
.|..|...+|.|.-++..++.+.+.......... ..+....+.+.++.+++++ +++|.+. .+|||||+|..|+.+
T Consensus 79 Ar~GifLafQ~P~ei~GV~~~~fLr~a~n~~~~~~~~~~~~~~~~~e~~~~l~~~~~~l~R~vN~GFSGGEkKR~EilQ~ 158 (251)
T COG0396 79 ARAGIFLAFQYPVEIPGVTNSDFLRAAMNARRGARGILPEFIKELKEKAELLGLDEEFLERYVNEGFSGGEKKRNEILQL 158 (251)
T ss_pred HhcCCEEeecCCccCCCeeHHHHHHHHHHhhhccccccHHHHHHHHHHHHHcCCCHHHhhcccCCCcCcchHHHHHHHHH
Confidence 7889999999999999999999987765432111 2345667889999999986 7889886 599999999999999
Q ss_pred HcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhC-CEEEEEECCEEEEecCcc
Q psy7366 492 LLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALC-TKLTIMVNGQFTCLGSAT 562 (566)
Q Consensus 492 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~-drv~~l~~G~i~~~g~~~ 562 (566)
++.+|++.|||||-||||..+-+.+.+.++.++++|.++++|||....+..+- |++.+|.+|+|+.+|.++
T Consensus 159 ~~lePkl~ILDE~DSGLDIdalk~V~~~i~~lr~~~~~~liITHy~rll~~i~pD~vhvl~~GrIv~sG~~e 230 (251)
T COG0396 159 LLLEPKLAILDEPDSGLDIDALKIVAEGINALREEGRGVLIITHYQRLLDYIKPDKVHVLYDGRIVKSGDPE 230 (251)
T ss_pred HhcCCCEEEecCCCcCccHHHHHHHHHHHHHHhcCCCeEEEEecHHHHHhhcCCCEEEEEECCEEEecCCHH
Confidence 99999999999999999999999999999999999999999999987776553 999999999999999983
No 352
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=100.00 E-value=1.7e-38 Score=290.09 Aligned_cols=144 Identities=35% Similarity=0.535 Sum_probs=135.4
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++++|+++.|+ +.++++++||++++||+++|+||||||||||+++|+|+++|++|+|+++|. ..++
T Consensus 1 l~~~~l~~~~~----~~~~l~~~~~~~~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~~~----------~~i~ 66 (144)
T cd03221 1 IELENLSKTYG----GKLLLKDISLTINPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIVTWGST----------VKIG 66 (144)
T ss_pred CEEEEEEEEEC----CceEEEeeEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCe----------EEEE
Confidence 46889999996 346999999999999999999999999999999999999999999999984 3699
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+|| ||+||+||++|||||+.+|+++|||
T Consensus 67 ~~~~---------------------------------------------------lS~G~~~rv~laral~~~p~illlD 95 (144)
T cd03221 67 YFEQ---------------------------------------------------LSGGEKMRLALAKLLLENPNLLLLD 95 (144)
T ss_pred EEcc---------------------------------------------------CCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9998 9999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
|||+|||+.++..+.+.|+++ +.|||++||+++++..+||++++|++|+
T Consensus 96 EP~~~LD~~~~~~l~~~l~~~---~~til~~th~~~~~~~~~d~v~~l~~g~ 144 (144)
T cd03221 96 EPTNHLDLESIEALEEALKEY---PGTVILVSHDRYFLDQVATKIIELEDGK 144 (144)
T ss_pred CCccCCCHHHHHHHHHHHHHc---CCEEEEEECCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999877 5799999999999999999999999985
No 353
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.4e-39 Score=352.94 Aligned_cols=198 Identities=28% Similarity=0.473 Sum_probs=168.8
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.++++|++++|+.. .+++|+|+||+|++|++++|+||||||||||+|+|+|+++|++|+|.++|.++.. ....++++
T Consensus 320 ~i~~~~v~f~y~~~--~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~ 397 (529)
T TIGR02857 320 SLEFSGLSVAYPGR--RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQ 397 (529)
T ss_pred eEEEEEEEEECCCC--CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhh
Confidence 59999999999731 2479999999999999999999999999999999999999999999999999875 45667889
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-----------cccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-----------SDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGqkqrv~la 489 (566)
++||+|++.+|+. |++||+.++.. ..+ ++.+.++++..++.+. ......+||||||||++||
T Consensus 398 i~~v~Q~~~lf~~-ti~~Ni~~~~~--~~~----~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~la 470 (529)
T TIGR02857 398 IAWVPQHPFLFAG-TIAENIRLARP--DAS----DAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALA 470 (529)
T ss_pred eEEEcCCCcccCc-CHHHHHhccCC--CCC----HHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHH
Confidence 9999999999875 99999987521 111 2345566666655332 2334568999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEE
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM 550 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l 550 (566)
|||+++|++|||||||++||+.+.+.+++.|.++. .++|+|++||+++.+. .||++++|
T Consensus 471 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~~~~~~-~~d~i~~l 529 (529)
T TIGR02857 471 RAFLRDAPLLLLDEPTAHLDAETEALVTEALRALA-QGRTVLLVTHRLALAE-RADRIVVL 529 (529)
T ss_pred HHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHH-hCCEEEeC
Confidence 99999999999999999999999999999998874 5899999999998875 59999875
No 354
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.2e-39 Score=383.98 Aligned_cols=209 Identities=22% Similarity=0.396 Sum_probs=174.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEE-cCccCCC-chHHhcC
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYV-MNHSIRD-SMDLVRS 419 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~-~g~~~~~-~~~~~~~ 419 (566)
.|+++|+++.|+... ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+ +|.++.. ....+|+
T Consensus 382 ~I~~~nVsf~Y~~~~-~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~ 460 (1466)
T PTZ00265 382 KIQFKNVRFHYDTRK-DVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRS 460 (1466)
T ss_pred cEEEEEEEEEcCCCC-CCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHH
Confidence 589999999997321 246999999999999999999999999999999999999999999999 4677754 3456788
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHh-cC---------C----------------------------------------
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRV-RN---------V---------------------------------------- 449 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~-~~---------~---------------------------------------- 449 (566)
+||||+|++.+|+. |++||+.++... .. .
T Consensus 461 ~Ig~V~Q~~~LF~~-TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 539 (1466)
T PTZ00265 461 KIGVVSQDPLLFSN-SIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRK 539 (1466)
T ss_pred hccEecccccchhc-cHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchhhhhhccc
Confidence 89999999999875 999999885310 00 0
Q ss_pred -CchHHHHHHHHHHHHcCCCCc-----------cccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHH
Q psy7366 450 -PSVLLNTIVNESLNKFALGHY-----------SDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLW 517 (566)
Q Consensus 450 -~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~ 517 (566)
......+.+.++++.+++.++ ....+.+||||||||++|||||+.+|+||||||||++||+.+...+.
T Consensus 540 ~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~ 619 (1466)
T PTZ00265 540 NYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQ 619 (1466)
T ss_pred ccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHH
Confidence 000112346667777766432 34667899999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-CCcEEEEEccCHHHHHhhCCEEEEEECC
Q psy7366 518 TCIERAVS-EGRCVILTSHNMEECEALCTKLTIMVNG 553 (566)
Q Consensus 518 ~~l~~~~~-~g~tvl~vsHd~~~~~~~~drv~~l~~G 553 (566)
+.|+++.+ +|+|+|+|||+++.+ +.||+|++|++|
T Consensus 620 ~~L~~~~~~~g~TvIiIsHrls~i-~~aD~Iivl~~g 655 (1466)
T PTZ00265 620 KTINNLKGNENRITIIIAHRLSTI-RYANTIFVLSNR 655 (1466)
T ss_pred HHHHHHhhcCCCEEEEEeCCHHHH-HhCCEEEEEeCC
Confidence 99999875 589999999999988 579999999986
No 355
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-39 Score=295.46 Aligned_cols=180 Identities=33% Similarity=0.510 Sum_probs=166.9
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc--ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID--KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~--~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+|.++++|++ .+++-+...+ ..+++||+++.+..+|..||++|||.|+++.+++...+++++++++.
T Consensus 39 AGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~ 118 (245)
T COG4555 39 AGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELS 118 (245)
T ss_pred CCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 499999999999999998 2444433322 34578999998899999999999999999999999999999999999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.++|.+.+|+.+.++|.||||||+|||||+++|+++||||||||||..++..+.+++++++.+|++|||+||.++|++.
T Consensus 119 k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~Evea 198 (245)
T COG4555 119 KRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEA 198 (245)
T ss_pred HHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+||||+++++|++++.|+.+.+...
T Consensus 199 lCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 199 LCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred hhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999987654
No 356
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.5e-38 Score=352.87 Aligned_cols=203 Identities=23% Similarity=0.335 Sum_probs=167.2
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+|+++|++++|+ ++.+|+|+||+|++|+++||+||||||||||||+|+|+++|++|+|.++|.. .+
T Consensus 3 ~l~i~~ls~~~~----~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~----------~~ 68 (635)
T PRK11147 3 LISIHGAWLSFS----DAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDL----------IV 68 (635)
T ss_pred EEEEeeEEEEeC----CceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCC----------EE
Confidence 589999999996 4679999999999999999999999999999999999999999999998732 36
Q ss_pred EEEecCCCCCCCCCHHHHHH------------------------------HHHHh----cCCCchHHHHHHHHHHHHcCC
Q psy7366 422 GYCPQFDALNDRLTPREHLE------------------------------FYSRV----RNVPSVLLNTIVNESLNKFAL 467 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~------------------------------~~~~~----~~~~~~~~~~~~~~~l~~~~l 467 (566)
+|++|.+......++.+++. .+... ..........++.++++.+|+
T Consensus 69 ~~l~q~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl 148 (635)
T PRK11147 69 ARLQQDPPRNVEGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGL 148 (635)
T ss_pred EEeccCCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCC
Confidence 77777653323345555431 11000 000111234567889999999
Q ss_pred CCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEE
Q psy7366 468 GHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKL 547 (566)
Q Consensus 468 ~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv 547 (566)
. .++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+||++
T Consensus 149 ~--~~~~~~~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~---~~tvlivsHd~~~l~~~~d~i 223 (635)
T PRK11147 149 D--PDAALSSLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTF---QGSIIFISHDRSFIRNMATRI 223 (635)
T ss_pred C--CCCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhC---CCEEEEEeCCHHHHHHhcCeE
Confidence 6 38899999999999999999999999999999999999999999999999887 369999999999999999999
Q ss_pred EEEECCEEEE-ecCccc
Q psy7366 548 TIMVNGQFTC-LGSATH 563 (566)
Q Consensus 548 ~~l~~G~i~~-~g~~~~ 563 (566)
++|++|+++. .|+.++
T Consensus 224 ~~L~~G~i~~~~g~~~~ 240 (635)
T PRK11147 224 VDLDRGKLVSYPGNYDQ 240 (635)
T ss_pred EEEECCEEEEecCCHHH
Confidence 9999999974 566543
No 357
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=2.6e-38 Score=297.34 Aligned_cols=153 Identities=27% Similarity=0.371 Sum_probs=138.3
Q ss_pred eeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEe
Q psy7366 346 KRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCP 425 (566)
Q Consensus 346 ~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~ 425 (566)
.|+++.|+ ++.++++ +|+|++||+++|+||||||||||+|+|+|+++|++|+|.++|.+ ++|++
T Consensus 4 ~~l~~~~~----~~~~l~~-~~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~-----------i~~~~ 67 (177)
T cd03222 4 PDCVKRYG----VFFLLVE-LGVVKEGEVIGIVGPNGTGKTTAVKILAGQLIPNGDNDEWDGIT-----------PVYKP 67 (177)
T ss_pred CCeEEEEC----CEEEEcc-CcEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCcEEEECCEE-----------EEEEc
Confidence 47889996 5678888 49999999999999999999999999999999999999999853 88998
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCC
Q psy7366 426 QFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPT 505 (566)
Q Consensus 426 q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt 505 (566)
|++. ||||||||++|||||+.+|+++||||||
T Consensus 68 q~~~------------------------------------------------LSgGq~qrv~laral~~~p~lllLDEPt 99 (177)
T cd03222 68 QYID------------------------------------------------LSGGELQRVAIAAALLRNATFYLFDEPS 99 (177)
T ss_pred ccCC------------------------------------------------CCHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 8642 9999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCC-cEEEEEccCHHHHHhhCCEEEEEECCEEEEe--cCcc
Q psy7366 506 SGMDPGARRFLWTCIERAVSEG-RCVILTSHNMEECEALCTKLTIMVNGQFTCL--GSAT 562 (566)
Q Consensus 506 ~gLD~~~~~~l~~~l~~~~~~g-~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~--g~~~ 562 (566)
++||+.+++.+.+.|.++++++ .|||++|||++++..+||++++|+++..+.+ |.|.
T Consensus 100 s~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~~~~~~~~~~~~~ 159 (177)
T cd03222 100 AYLDIEQRLNAARAIRRLSEEGKKTALVVEHDLAVLDYLSDRIHVFEGEPGVYGIASQPK 159 (177)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHhCCEEEEEcCCCccceeccCCc
Confidence 9999999999999999987764 9999999999999999999999998765543 5544
No 358
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.6e-38 Score=350.68 Aligned_cols=185 Identities=29% Similarity=0.460 Sum_probs=157.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.++++|++++|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++......+|++|
T Consensus 334 ~I~~~~vsf~Y~~---~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~~~lr~~i 410 (529)
T TIGR02868 334 TLELRDLSFGYPG---SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQDELRRRI 410 (529)
T ss_pred eEEEEEEEEecCC---CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHHHHHHhhe
Confidence 5999999999973 3469999999999999999999999999999999999999999999999999865555678899
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCc-------ccc----CcCcCChhHHHHHHHHH
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHY-------SDR----EVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~----~~~~LSgGqkqrv~la~ 490 (566)
+||||++.+|++ |++||+.++.. .. .++.+.++++..++.++ .+. ....||||||||++|||
T Consensus 411 ~~V~Q~~~lF~~-TI~eNI~~g~~--~~----~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiAR 483 (529)
T TIGR02868 411 SVFAQDAHLFDT-TVRDNLRLGRP--DA----TDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALAR 483 (529)
T ss_pred EEEccCcccccc-cHHHHHhccCC--CC----CHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHH
Confidence 999999999987 99999987521 11 12345666776665432 233 34579999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCH
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNM 537 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~ 537 (566)
||+++|++||||||||+||+.+.+.+.+.|.++ .+++|+|+|||++
T Consensus 484 all~~~~iliLDE~TSaLD~~te~~I~~~l~~~-~~~~TvIiItHrl 529 (529)
T TIGR02868 484 ALLADAPILLLDEPTEHLDAGTESELLEDLLAA-LSGKTVVVITHHL 529 (529)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEecCC
Confidence 999999999999999999999999999999875 3479999999974
No 359
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=335.58 Aligned_cols=199 Identities=30% Similarity=0.444 Sum_probs=172.5
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
+|.++|+++.|+ ++++|+++||+|.+|+++||+|+||||||||||+|+|...|++|+|...+.- ++
T Consensus 3 ~i~~~~ls~~~g----~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~----------~v 68 (530)
T COG0488 3 MITLENLSLAYG----DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGL----------RV 68 (530)
T ss_pred eEEEeeeEEeeC----CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCc----------eE
Confidence 689999999996 6889999999999999999999999999999999999999999999887632 59
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHh-cC-----------------------------CCchHHHHHHHHHHHHcCCCCcc
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRV-RN-----------------------------VPSVLLNTIVNESLNKFALGHYS 471 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~-~~-----------------------------~~~~~~~~~~~~~l~~~~l~~~~ 471 (566)
+|++|++.+.+..||.+.+...... .. ......+.++..++..+|+...
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~- 147 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE- 147 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-
Confidence 9999999999889999987543210 00 0011123567778888888876
Q ss_pred ccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE
Q psy7366 472 DREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV 551 (566)
Q Consensus 472 ~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~ 551 (566)
++++++||||||.||+||+||+.+|++||||||||+||..+..-+.+.|.++ .| |||+||||.+++..+|++|+.++
T Consensus 148 ~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~--~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 148 DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY--PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC--CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 9999999999999999999999999999999999999999999998888755 35 99999999999999999999999
Q ss_pred CCEEEEe
Q psy7366 552 NGQFTCL 558 (566)
Q Consensus 552 ~G~i~~~ 558 (566)
.|++...
T Consensus 225 ~g~l~~y 231 (530)
T COG0488 225 RGKLTPY 231 (530)
T ss_pred CCceeEe
Confidence 9987554
No 360
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.6e-38 Score=321.72 Aligned_cols=217 Identities=29% Similarity=0.435 Sum_probs=181.8
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCc-hHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS-MDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~ 419 (566)
..+.+++++..-+. ..+++++++||++.+||.+||+||+|||||||.|+|.|..+|.+|.|.+||-++..+ .+.+-+
T Consensus 333 g~L~Ve~l~~~PPg--~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~ 410 (580)
T COG4618 333 GALSVERLTAAPPG--QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGR 410 (580)
T ss_pred ceeeEeeeeecCCC--CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhcc
Confidence 46899999886553 357899999999999999999999999999999999999999999999999999774 556788
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHH-----HHHHHHHHHcCCCCccccC----cCcCChhHHHHHHHHH
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLN-----TIVNESLNKFALGHYSDRE----VRTLSGGNKRKLSTAI 490 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~----~~~LSgGqkqrv~la~ 490 (566)
+|||+||+..+|++ ||.|||.-+.. ..+.+..- ..+.+++-++ .+-.+.. -..||||||||++|||
T Consensus 411 hiGYLPQdVeLF~G-TIaeNIaRf~~--~~d~~kIieAA~lAgvHelIl~l--P~GYdT~iG~~G~~LSgGQRQRIaLAR 485 (580)
T COG4618 411 HIGYLPQDVELFDG-TIAENIARFGE--EADPEKVIEAARLAGVHELILRL--PQGYDTRIGEGGATLSGGQRQRIALAR 485 (580)
T ss_pred ccCcCcccceecCC-cHHHHHHhccc--cCCHHHHHHHHHHcChHHHHHhC--cCCccCccCCCCCCCCchHHHHHHHHH
Confidence 99999999999998 99999974421 11111111 1133444333 2333444 4589999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||..+|.+++||||-++||......+.+.|...+++|.|+|+|||....+. .+|+|++|++|++..+|+.+++.
T Consensus 486 AlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~-~~Dkilvl~~G~~~~FG~r~eVL 559 (580)
T COG4618 486 ALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALA-SVDKILVLQDGRIAAFGPREEVL 559 (580)
T ss_pred HHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHh-hcceeeeecCChHHhcCCHHHHH
Confidence 999999999999999999999999999999999999999999999987765 69999999999999999988763
No 361
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-38 Score=306.92 Aligned_cols=180 Identities=25% Similarity=0.346 Sum_probs=162.5
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCc----ccccccceeEEcCCCC-CCCCCCHHHHHHHHHHhcCCChhhHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPT----IDKNLSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVN 72 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~----~~~~~~~ig~v~Q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~ 72 (566)
+||||++|+++|++.|.. .+.+.... .....++||||+|+|. .+...||.|+++|+.++.+++.+++++++.
T Consensus 41 sGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~ 120 (235)
T COG1122 41 SGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVA 120 (235)
T ss_pred CCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHH
Confidence 599999999999999876 23333211 1234567999999995 446789999999999999999999999999
Q ss_pred HHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChh
Q psy7366 73 ESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNME 151 (566)
Q Consensus 73 ~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~ 151 (566)
++++.+|+.+.+++.+.+|||||||||+||.+|+.+|++||||||||+|||.+++++.+++++++++ |+|||++|||++
T Consensus 121 ~~l~~vgl~~~~~r~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~ 200 (235)
T COG1122 121 EALELVGLEELLDRPPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE 200 (235)
T ss_pred HHHHHcCchhhccCCccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999887 689999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
++..+|||+++|++|+++.+|++.++...
T Consensus 201 ~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 201 LVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999887653
No 362
>COG4107 PhnK ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-37 Score=278.07 Aligned_cols=216 Identities=26% Similarity=0.439 Sum_probs=179.6
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCcc-----CCC---
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHS-----IRD--- 412 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~-----~~~--- 412 (566)
+.+++.+++|.|+ ...-.+||||++.|||++||+|.+||||||||+||++-+.|+.|+|.+.-.+ +..
T Consensus 5 PLL~V~~lsk~Yg----~~~gc~~vsF~l~PGeVLgiVGESGSGKtTLL~~is~rl~p~~G~v~Y~~r~~~~~dl~~msE 80 (258)
T COG4107 5 PLLSVSGLSKLYG----PGKGCRDVSFDLYPGEVLGIVGESGSGKTTLLKCISGRLTPDAGTVTYRMRDGQPRDLYTMSE 80 (258)
T ss_pred cceeehhhhhhhC----CCcCccccceeecCCcEEEEEecCCCcHHhHHHHHhcccCCCCCeEEEEcCCCCchhHhhhch
Confidence 4689999999997 4456899999999999999999999999999999999999999999986532 211
Q ss_pred c--hHHhcCceEEEecCCC--CCCCCCHHHHH----HH-HHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhH
Q psy7366 413 S--MDLVRSYIGYCPQFDA--LNDRLTPREHL----EF-YSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGN 482 (566)
Q Consensus 413 ~--~~~~~~~i~~v~q~~~--l~~~~tv~e~l----~~-~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGq 482 (566)
. ....|..-|+|.|+|. +-...|..-|+ .- +.+.++ ..++.+.+||+++.++ ...|..|.++||||
T Consensus 81 aeRR~L~RTeWG~VhQnP~DGLRm~VSAG~NiGERlma~G~RHYG----~iR~~a~~WL~~VEI~~~RiDD~PrtFSGGM 156 (258)
T COG4107 81 AERRRLLRTEWGFVHQNPRDGLRMQVSAGGNIGERLMAIGARHYG----NIRAEAQDWLEEVEIDLDRIDDLPRTFSGGM 156 (258)
T ss_pred HHHHHHhhhccceeecCccccceeeeccCCccchhHHhhhhhhhh----hHHHHHHHHHHhcccCcccccCcccccchHH
Confidence 1 1124556899999973 43333333343 21 222222 3456688999999997 45688999999999
Q ss_pred HHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCc
Q psy7366 483 KRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSA 561 (566)
Q Consensus 483 kqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~ 561 (566)
|||+.|||.|+..|+++++||||.|||...+..+.++++.+..+ |.+++++|||+..+.-++||.++|++|++++.|-.
T Consensus 157 qQRLQiARnLVt~PrLvfMDEPTGGLDVSVQARLLDllrgLv~~l~la~viVTHDl~VarLla~rlmvmk~g~vve~GLT 236 (258)
T COG4107 157 QQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLADRLMVMKQGQVVESGLT 236 (258)
T ss_pred HHHHHHHHHhccCCceEEecCCCCCcchhhHHHHHHHHHHHHHhcCceEEEEechhHHHHHhhhcceeecCCCEeccccc
Confidence 99999999999999999999999999999999999999999876 99999999999999999999999999999999977
Q ss_pred ccc
Q psy7366 562 THL 564 (566)
Q Consensus 562 ~~l 564 (566)
+.+
T Consensus 237 Drv 239 (258)
T COG4107 237 DRV 239 (258)
T ss_pred ccc
Confidence 654
No 363
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=100.00 E-value=4.1e-37 Score=288.91 Aligned_cols=156 Identities=22% Similarity=0.313 Sum_probs=135.8
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHH
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPR 437 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~ 437 (566)
.+++|+|+||+|++|++++|+||||||||||||+|.+ ++|++.+++.... ..+..++|++|
T Consensus 7 ~~~~l~~isl~i~~G~~~~l~G~nG~GKSTLl~~il~----~~G~v~~~~~~~~----~~~~~~~~~~q----------- 67 (176)
T cd03238 7 NVHNLQNLDVSIPLNVLVVVTGVSGSGKSTLVNEGLY----ASGKARLISFLPK----FSRNKLIFIDQ----------- 67 (176)
T ss_pred eeeeecceEEEEcCCCEEEEECCCCCCHHHHHHHHhh----cCCcEEECCcccc----cccccEEEEhH-----------
Confidence 4568999999999999999999999999999999963 6999999876311 11335778776
Q ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHHHHcCC--CCEEEEeCCCCCCCHHHHH
Q psy7366 438 EHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGN--PPLIFLDEPTSGMDPGARR 514 (566)
Q Consensus 438 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~~~--p~lllLDEPt~gLD~~~~~ 514 (566)
.++++.+++.. ..++++.+||||||||++|||||+.+ |+++||||||++||+.+++
T Consensus 68 ---------------------~~~l~~~~L~~~~~~~~~~~LSgGq~qrl~laral~~~~~p~llLlDEPt~~LD~~~~~ 126 (176)
T cd03238 68 ---------------------LQFLIDVGLGYLTLGQKLSTLSGGELQRVKLASELFSEPPGTLFILDEPSTGLHQQDIN 126 (176)
T ss_pred ---------------------HHHHHHcCCCccccCCCcCcCCHHHHHHHHHHHHHhhCCCCCEEEEeCCcccCCHHHHH
Confidence 24678888875 47899999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 515 FLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 515 ~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
.+.+.|+++.++|.|||++||+++++ ..||++++|.+|+
T Consensus 127 ~l~~~l~~~~~~g~tvIivSH~~~~~-~~~d~i~~l~~g~ 165 (176)
T cd03238 127 QLLEVIKGLIDLGNTVILIEHNLDVL-SSADWIIDFGPGS 165 (176)
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHH-HhCCEEEEECCCC
Confidence 99999999877799999999999997 5799999996654
No 364
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.8e-37 Score=369.94 Aligned_cols=207 Identities=20% Similarity=0.270 Sum_probs=179.4
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC----CCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCC
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI----KPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDR 433 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~----~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~ 433 (566)
.+.+|+|+|+++++||+++|+||||||||||||+|+|.. +|++|+|.++|+++.......++.++|++|++.+++.
T Consensus 73 ~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~ 152 (1394)
T TIGR00956 73 TFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPH 152 (1394)
T ss_pred cceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCC
Confidence 467999999999999999999999999999999999986 5789999999988754333456679999999999999
Q ss_pred CCHHHHHHHHHHhcC-------CCchHHH-HHHHHHHHHcCCCCccccC-----cCcCChhHHHHHHHHHHHcCCCCEEE
Q psy7366 434 LTPREHLEFYSRVRN-------VPSVLLN-TIVNESLNKFALGHYSDRE-----VRTLSGGNKRKLSTAIALLGNPPLIF 500 (566)
Q Consensus 434 ~tv~e~l~~~~~~~~-------~~~~~~~-~~~~~~l~~~~l~~~~~~~-----~~~LSgGqkqrv~la~al~~~p~lll 500 (566)
+||+||+.+....+. ..+.+.. ...+.+++.+||.+..+++ +..|||||||||+||++|+.+|++++
T Consensus 153 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vll 232 (1394)
T TIGR00956 153 LTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQC 232 (1394)
T ss_pred CCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEEE
Confidence 999999998765431 1222222 2346689999998777655 56799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CcEEEEEccCH-HHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 501 LDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM-EECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 501 LDEPt~gLD~~~~~~l~~~l~~~~~~-g~tvl~vsHd~-~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
|||||+|||+.++..+.+.|++++++ |+|||+++|+. +++.+++|++++|++|++++.|+++++
T Consensus 233 lDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~~~~~ 298 (1394)
T TIGR00956 233 WDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGPADKA 298 (1394)
T ss_pred EeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECCHHHH
Confidence 99999999999999999999999875 99999999996 788999999999999999999998765
No 365
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-37 Score=283.21 Aligned_cols=155 Identities=37% Similarity=0.664 Sum_probs=143.0
Q ss_pred EeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCceEE
Q psy7366 345 VKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYIGY 423 (566)
Q Consensus 345 ~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i~~ 423 (566)
++++++.|. ++.+++++||+|++|++++|+|+||||||||+++|+|+++|++|+|+++|.++.. .....+..++|
T Consensus 2 ~~~~~~~~~----~~~~l~~~~~~i~~g~~~~i~G~nGsGKStll~~l~g~~~~~~G~i~~~~~~~~~~~~~~~~~~i~~ 77 (157)
T cd00267 2 IENLSFRYG----GRTALDNVSLTLKAGEIVALVGPNGSGKSTLLRAIAGLLKPTSGEILIDGKDIAKLPLEELRRRIGY 77 (157)
T ss_pred eEEEEEEeC----CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccCCHHHHHhceEE
Confidence 578899986 3479999999999999999999999999999999999999999999999987754 23345677999
Q ss_pred EecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeC
Q psy7366 424 CPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDE 503 (566)
Q Consensus 424 v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDE 503 (566)
++| ||+||+||++||++++.+|+++||||
T Consensus 78 ~~q---------------------------------------------------lS~G~~~r~~l~~~l~~~~~i~ilDE 106 (157)
T cd00267 78 VPQ---------------------------------------------------LSGGQRQRVALARALLLNPDLLLLDE 106 (157)
T ss_pred Eee---------------------------------------------------CCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 998 99999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCE
Q psy7366 504 PTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQ 554 (566)
Q Consensus 504 Pt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~ 554 (566)
||+|||+.++..+.+.|.++.+.+.|+|++||+++++..+||++++|++|+
T Consensus 107 p~~~lD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~ 157 (157)
T cd00267 107 PTSGLDPASRERLLELLRELAEEGRTVIIVTHDPELAELAADRVIVLKDGK 157 (157)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCcC
Confidence 999999999999999999987768999999999999999999999999874
No 366
>COG4133 CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-37 Score=282.70 Aligned_cols=192 Identities=27% Similarity=0.411 Sum_probs=170.9
Q ss_pred EEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceE
Q psy7366 343 LVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIG 422 (566)
Q Consensus 343 l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~ 422 (566)
++.+|++..-+ ..++|.++||++.+||++-|.||||||||||||+|+|+.+|++|+|+|+|.++....+...+.+-
T Consensus 3 L~a~~L~~~R~----e~~lf~~L~f~l~~Ge~~~i~G~NG~GKTtLLRilaGLl~p~~G~v~~~~~~i~~~~~~~~~~l~ 78 (209)
T COG4133 3 LEAENLSCERG----ERTLFSDLSFTLNAGEALQITGPNGAGKTTLLRILAGLLRPDAGEVYWQGEPIQNVRESYHQALL 78 (209)
T ss_pred chhhhhhhccC----cceeecceeEEEcCCCEEEEECCCCCcHHHHHHHHHcccCCCCCeEEecCCCCccchhhHHHHHH
Confidence 56677776654 67899999999999999999999999999999999999999999999999998776555566777
Q ss_pred EEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEe
Q psy7366 423 YCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLD 502 (566)
Q Consensus 423 ~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLD 502 (566)
|+--.+.+-+.+|+.||+.|+..+++. .....+.++++.+||....|.++.+||-|||+||+|||.++..+++.|||
T Consensus 79 yLGH~~giK~eLTa~ENL~F~~~~~~~---~~~~~i~~Al~~vgL~g~~dlp~~~LSAGQqRRvAlArL~ls~~pLWiLD 155 (209)
T COG4133 79 YLGHQPGIKTELTALENLHFWQRFHGS---GNAATIWEALAQVGLAGLEDLPVGQLSAGQQRRVALARLWLSPAPLWILD 155 (209)
T ss_pred HhhccccccchhhHHHHHHHHHHHhCC---CchhhHHHHHHHcCcccccccchhhcchhHHHHHHHHHHHcCCCCceeec
Confidence 887778888999999999999887653 12345788999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHH
Q psy7366 503 EPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECE 541 (566)
Q Consensus 503 EPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~ 541 (566)
|||++||......+-.++..-..+|..||.+||..--+.
T Consensus 156 EP~taLDk~g~a~l~~l~~~H~~~GGiVllttHq~l~~~ 194 (209)
T COG4133 156 EPFTALDKEGVALLTALMAAHAAQGGIVLLTTHQPLPIA 194 (209)
T ss_pred CcccccCHHHHHHHHHHHHHHhcCCCEEEEecCCccCCC
Confidence 999999999999999999998888999999999865543
No 367
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-37 Score=303.21 Aligned_cols=180 Identities=22% Similarity=0.342 Sum_probs=160.5
Q ss_pred CCcchHHHHHhccccCCCc---cCCC---CCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcC--CChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGS---NPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRN--VPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~---~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~--~~~~~~~~~~ 71 (566)
.||||++|+|.|+.-|+.. ..+. +... ....++||+|+|+..+|+.|||++|++|+..... .+..+++.++
T Consensus 39 aGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv 118 (345)
T COG1118 39 AGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARV 118 (345)
T ss_pred CcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHH
Confidence 5999999999999998872 2222 1111 2334679999999999999999999999986652 4456788999
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCCh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM 150 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~ 150 (566)
.++|+.++|+...++++.+|||||||||+|||||+..|+|||||||+++||..-+.+|..+|+++.+. |.|+++||||.
T Consensus 119 ~elL~lvqL~~la~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~ 198 (345)
T COG1118 119 EELLRLVQLEGLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQ 198 (345)
T ss_pred HHHHHHhcccchhhcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999766 99999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+|+.++||||++|++|+|...|+++++...
T Consensus 199 eea~~ladrvvvl~~G~Ieqvg~p~ev~~~ 228 (345)
T COG1118 199 EEALELADRVVVLNQGRIEQVGPPDEVYDH 228 (345)
T ss_pred HHHHhhcceEEEecCCeeeeeCCHHHHhcC
Confidence 999999999999999999999999998654
No 368
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4e-37 Score=312.69 Aligned_cols=180 Identities=39% Similarity=0.617 Sum_probs=161.8
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.|++ .+.+.++.. ...+++|||+||+|.+++.+||+|++.|.+..++.+.....+++++++
T Consensus 42 AGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l 121 (293)
T COG1131 42 AGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELL 121 (293)
T ss_pred CCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHH
Confidence 599999999999999876 344443332 233567999999999999999999999999998876555677999999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEecCChhHHH
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEG-RCVILTSHNMEECE 154 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g-~tviiisH~~~~~~ 154 (566)
+.+||+...++++++||+|||||++||+||+++|++|||||||+||||.++.+++++|++++++| +|||++||.+++++
T Consensus 122 ~~~~L~~~~~~~~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~ 201 (293)
T COG1131 122 ELFGLEDKANKKVRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAE 201 (293)
T ss_pred HHcCCchhhCcchhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHH
Confidence 99999987789999999999999999999999999999999999999999999999999999887 79999999999999
Q ss_pred hhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 155 ALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 155 ~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
.+||||++|++|++++.|+++++...
T Consensus 202 ~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 202 ELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999887654
No 369
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-37 Score=292.44 Aligned_cols=180 Identities=26% Similarity=0.367 Sum_probs=162.4
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc------ccccceeEEcCCCCCCCCCCHHHHHHHHHHh-cCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID------KNLSYIGYCPQFDALNDRLTPREHLEFYSRV-RNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~------~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~-~~~~~~~~~~~ 70 (566)
+||||++|+|.|++.|++ .+.+.+.... ...+++|++||.-.||..+||+||++|.... ..+++..+++.
T Consensus 45 sGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~l 124 (263)
T COG1127 45 SGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIREL 124 (263)
T ss_pred cCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHH
Confidence 599999999999999887 3444432111 2245799999999999999999999998655 46899999999
Q ss_pred HHHHHHHcCCCcc-cccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecC
Q psy7366 71 VNESLNKFALGHY-SDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSH 148 (566)
Q Consensus 71 ~~~~l~~~gl~~~-~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH 148 (566)
+..-|+.+||... .++++++|||||++|++||||++.+|++|++||||+||||.+...+-++|+++++. |.|+++|||
T Consensus 125 v~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTH 204 (263)
T COG1127 125 VLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTH 204 (263)
T ss_pred HHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEEC
Confidence 9999999999986 89999999999999999999999999999999999999999999999999999876 999999999
Q ss_pred ChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 149 NMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 149 ~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
|++++..+||||++|.+|+|++.|+++++.+.
T Consensus 205 Dl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 205 DLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred ChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999998753
No 370
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=5.9e-37 Score=344.41 Aligned_cols=194 Identities=21% Similarity=0.292 Sum_probs=164.6
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCc
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 420 (566)
..++++|+++.|+. ++.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ +++
T Consensus 450 ~~i~~~nv~~~~~~---~~~il~~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~----------~~~ 516 (659)
T TIGR00954 450 NGIKFENIPLVTPN---GDVLIESLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA----------KGK 516 (659)
T ss_pred CeEEEEeeEEECCC---CCeeeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC----------CCc
Confidence 46999999999952 35799999999999999999999999999999999999999999998864 347
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCC-chHHHHHHHHHHHHcCCCCccccCc---------CcCChhHHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVP-SVLLNTIVNESLNKFALGHYSDREV---------RTLSGGNKRKLSTAI 490 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~---------~~LSgGqkqrv~la~ 490 (566)
++|+||++.+++. |++||+.+........ .....+.+.++++.+++.+..+++. .+||||||||++|||
T Consensus 517 i~~v~Q~~~l~~~-tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~~~g~~~~~~~~~~LSgGqkQRl~iAR 595 (659)
T TIGR00954 517 LFYVPQRPYMTLG-TLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILEREGGWSAVQDWMDVLSGGEKQRIAMAR 595 (659)
T ss_pred EEEECCCCCCCCc-CHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhhcCCcccccccccCCCHHHHHHHHHHH
Confidence 9999999998887 9999998753211110 1112345678899999976665543 799999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEEC
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVN 552 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~ 552 (566)
||+.+|+++||||||++||+.+++.+.+.+++. |.|+|++||+++.+ ..||++++|+.
T Consensus 596 al~~~p~illLDEpts~LD~~~~~~l~~~l~~~---~~tvI~isH~~~~~-~~~d~il~l~~ 653 (659)
T TIGR00954 596 LFYHKPQFAILDECTSAVSVDVEGYMYRLCREF---GITLFSVSHRKSLW-KYHEYLLYMDG 653 (659)
T ss_pred HHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc---CCEEEEEeCchHHH-HhCCEEEEEeC
Confidence 999999999999999999999999999888763 89999999999987 57999999963
No 371
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.9e-37 Score=341.26 Aligned_cols=193 Identities=25% Similarity=0.348 Sum_probs=164.8
Q ss_pred eeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEE-----------EcCccCCCchH
Q psy7366 347 RLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAY-----------VMNHSIRDSMD 415 (566)
Q Consensus 347 ~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~-----------~~g~~~~~~~~ 415 (566)
++++.|+. +..+|++++ .+++|+++||+||||||||||+|+|+|+++|++|+|. ++|.++.....
T Consensus 78 ~~~~~yg~---~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~ 153 (590)
T PRK13409 78 EPVHRYGV---NGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFK 153 (590)
T ss_pred CceEEecC---CceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHH
Confidence 47888962 346999999 8999999999999999999999999999999999997 88887743221
Q ss_pred H---hcCceEEEecCCCCCCC---CCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHH
Q psy7366 416 L---VRSYIGYCPQFDALNDR---LTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 416 ~---~~~~i~~v~q~~~l~~~---~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la 489 (566)
. .+.+++|.+|....++. .||.|++... .....+.++++.+++....++++.+|||||||||+||
T Consensus 154 ~~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~---------~~~~~~~~~l~~l~l~~~~~~~~~~LSgGe~qrv~ia 224 (590)
T PRK13409 154 KLYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKV---------DERGKLDEVVERLGLENILDRDISELSGGELQRVAIA 224 (590)
T ss_pred HHhccCcceeecccchhhhhhhhcchHHHHHHhh---------hHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHH
Confidence 1 12346666665433322 3999988631 1235678999999999889999999999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECC
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNG 553 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G 553 (566)
+||+.+|++|||||||++||+..+..+.+.|+++++ |.|||++|||++++..+||++++|+++
T Consensus 225 ~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~-g~tvIivsHd~~~l~~~~D~v~vl~~~ 287 (590)
T PRK13409 225 AALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAE-GKYVLVVEHDLAVLDYLADNVHIAYGE 287 (590)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999988 999999999999999999999999873
No 372
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-37 Score=313.13 Aligned_cols=180 Identities=26% Similarity=0.373 Sum_probs=165.4
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
+||||++|+|.|+.-+++ .+.+..... ....+.|+||||+..|||.|||+||++|+.++.+.++.+++++++++++
T Consensus 40 cGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~ 119 (338)
T COG3839 40 CGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAK 119 (338)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHH
Confidence 699999999999998766 244433222 2335679999999999999999999999999999999999999999999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.++|++.+++++.+|||||||||+|||||+++|+++|||||+|+||+.-+..+...|+++.++ |.|+|++|||-.|+..
T Consensus 120 ~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmt 199 (338)
T COG3839 120 LLGLEHLLNRKPLQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMT 199 (338)
T ss_pred HcCChhHHhcCcccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999998665 9999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
++|||+||++|+|...|++.++...
T Consensus 200 ladri~Vm~~G~i~Q~g~p~ely~~ 224 (338)
T COG3839 200 LADRIVVMNDGRIQQVGTPLELYER 224 (338)
T ss_pred hCCEEEEEeCCeeeecCChHHHhhC
Confidence 9999999999999999999998764
No 373
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-37 Score=295.54 Aligned_cols=167 Identities=26% Similarity=0.331 Sum_probs=151.4
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNK 77 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 77 (566)
+||||++|++.|+..|... +.+... ......+|||||++.|+|+.||.||+.++.+..+.+..+..+++.++|+.
T Consensus 40 cGKSTLLriiAGL~~p~~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~ 117 (248)
T COG1116 40 CGKSTLLRLIAGLEKPTSGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLEL 117 (248)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCccc--CCCCCCEEEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHH
Confidence 6999999999999988773 444332 33345799999999999999999999999988888888888899999999
Q ss_pred cCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHHhh
Q psy7366 78 FALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEAL 156 (566)
Q Consensus 78 ~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~~~ 156 (566)
+||....++++++|||||||||+|||||+.+|+|||||||+++||..++..+.+.|.++++ .++||++||||++|+..+
T Consensus 118 VgL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~L 197 (248)
T COG1116 118 VGLAGFEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYL 197 (248)
T ss_pred cCCcchhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999865 589999999999999999
Q ss_pred cCEEEEEeC--CEEE
Q psy7366 157 CTKLTIMVN--GQFT 169 (566)
Q Consensus 157 ~d~i~vl~~--G~i~ 169 (566)
+|||++|.+ |+|.
T Consensus 198 sdRivvl~~~P~~i~ 212 (248)
T COG1116 198 ADRVVVLSNRPGRIG 212 (248)
T ss_pred hCEEEEecCCCccee
Confidence 999999999 4554
No 374
>KOG0056|consensus
Probab=100.00 E-value=2.3e-37 Score=315.13 Aligned_cols=217 Identities=24% Similarity=0.370 Sum_probs=183.0
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcC
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRS 419 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~ 419 (566)
..++++|+++.|.. ++++|+||||++.+|+.++|+||+|+||||++|++..+....+|.|.+||++++. ....+|+
T Consensus 536 G~i~fsnvtF~Y~p---~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs 612 (790)
T KOG0056|consen 536 GKIEFSNVTFAYDP---GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRS 612 (790)
T ss_pred CeEEEEEeEEecCC---CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHH
Confidence 45899999999974 6899999999999999999999999999999999999999999999999999976 4556889
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHH--HHHH-HcCCCCcccc----CcCcCChhHHHHHHHHHHH
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVN--ESLN-KFALGHYSDR----EVRTLSGGNKRKLSTAIAL 492 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~~l~-~~~l~~~~~~----~~~~LSgGqkqrv~la~al 492 (566)
.||.||||..+|++ |+..||.+... ....++..+.+. .+-+ .+++++..+. +.-.|||||||||+|||++
T Consensus 613 ~IGVVPQDtvLFNd-TI~yNIryak~--~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARti 689 (790)
T KOG0056|consen 613 SIGVVPQDTVLFND-TILYNIRYAKP--SASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTI 689 (790)
T ss_pred hcCcccCcceeecc-eeeeheeecCC--CCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHH
Confidence 99999999999886 99999987532 112222222221 1111 2445444343 4457999999999999999
Q ss_pred cCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 493 LGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 493 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
+++|.+++|||.||+||..+.+.+...|.+++. ++|-|+|.|.+..+-. ||.|+++++|+|++.|..+++.
T Consensus 690 LK~P~iIlLDEATSALDT~tER~IQaaL~rlca-~RTtIVvAHRLSTivn-AD~ILvi~~G~IvErG~HeeLl 760 (790)
T KOG0056|consen 690 LKAPSIILLDEATSALDTNTERAIQAALARLCA-NRTTIVVAHRLSTIVN-ADLILVISNGRIVERGRHEELL 760 (790)
T ss_pred hcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc-CCceEEEeeeehheec-ccEEEEEeCCeEeecCcHHHHH
Confidence 999999999999999999999999999999876 6888999999999876 9999999999999999998874
No 375
>COG4136 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1e-36 Score=267.09 Aligned_cols=202 Identities=21% Similarity=0.314 Sum_probs=174.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---ccEEEEcCccCCCchHHhc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT---SGNAYVMNHSIRDSMDLVR 418 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~ 418 (566)
++.++|++...+ +...|.++||+|.+|||+.|+||+|||||||+..+.|.+.++ +|+++++++.+...+ ..+
T Consensus 2 ~l~l~nvsl~l~----g~cLLa~~n~Tia~GeivtlMGPSGcGKSTLls~~~G~La~~F~~~G~~~l~~~~l~~lP-a~q 76 (213)
T COG4136 2 MLCLKNVSLRLP----GSCLLANVNFTIAKGEIVTLMGPSGCGKSTLLSWMIGALAGQFSCTGELWLNEQRLDMLP-AAQ 76 (213)
T ss_pred ceeeeeeeecCC----CceEEEeeeEEecCCcEEEEECCCCccHHHHHHHHHhhcccCcceeeEEEECCeeccccc-hhh
Confidence 467889987765 567899999999999999999999999999999999999874 799999999886532 345
Q ss_pred CceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCE
Q psy7366 419 SYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPL 498 (566)
Q Consensus 419 ~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~l 498 (566)
+++|++|||+.+||.++|.+|+.|.... .++....++.+...+++.++....++.|.+||||||-||++-|+|+..|+.
T Consensus 77 Rq~GiLFQD~lLFphlsVg~Nl~fAlp~-~~KG~aRr~~a~aAL~~~gL~g~f~~dP~tlSGGQrARvaL~R~Lla~Pk~ 155 (213)
T COG4136 77 RQIGILFQDALLFPHLSVGQNLLFALPA-TLKGNARRNAANAALERSGLDGAFHQDPATLSGGQRARVALLRALLAQPKA 155 (213)
T ss_pred hheeeeecccccccccccccceEEecCc-ccccHHHHhhHHHHHHHhccchhhhcChhhcCcchHHHHHHHHHHHhCcce
Confidence 6899999999999999999999875432 122334456788999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHH-HHhCCcEEEEEccCHHHHHhhCCEEEEE
Q psy7366 499 IFLDEPTSGMDPGARRFLWTCIER-AVSEGRCVILTSHNMEECEALCTKLTIM 550 (566)
Q Consensus 499 llLDEPt~gLD~~~~~~l~~~l~~-~~~~g~tvl~vsHd~~~~~~~~drv~~l 550 (566)
++||||+|.||..-+.++.+.+-. ....|..+|+||||..++. ...||+-|
T Consensus 156 lLLDEPFS~LD~ALR~qfR~wVFs~~r~agiPtv~VTHD~~Dvp-agsrVie~ 207 (213)
T COG4136 156 LLLDEPFSRLDVALRDQFRQWVFSEVRAAGIPTVQVTHDLQDVP-AGSRVIEM 207 (213)
T ss_pred eeeCCchhHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccccCC-CCCeeeee
Confidence 999999999999999999997754 4455999999999999887 45666655
No 376
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.8e-36 Score=361.74 Aligned_cols=206 Identities=23% Similarity=0.353 Sum_probs=178.2
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCC---ccEEEEcCccCCCchHHhcCceEEEecCCCCCCCC
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT---SGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRL 434 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~ 434 (566)
.+.+|+|+|+.|++|++++|+||||||||||||+|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~--~~~~i~yv~Q~d~~~~~l 254 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFV--PRKTSAYISQNDVHVGVM 254 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhc--ccceeEEecccccCCCcC
Confidence 357999999999999999999999999999999999999998 999999999874321 256799999999999999
Q ss_pred CHHHHHHHHHHhcCCC----------chHH------------------------HHHHHHHHHHcCCCCcc-----ccCc
Q psy7366 435 TPREHLEFYSRVRNVP----------SVLL------------------------NTIVNESLNKFALGHYS-----DREV 475 (566)
Q Consensus 435 tv~e~l~~~~~~~~~~----------~~~~------------------------~~~~~~~l~~~~l~~~~-----~~~~ 475 (566)
||+|++.|....++.. ..+. ...++.+++.+||.+.. +..+
T Consensus 255 TV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~ 334 (1470)
T PLN03140 255 TVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMI 334 (1470)
T ss_pred cHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccc
Confidence 9999999976543210 1100 01246789999997654 5677
Q ss_pred CcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCcEEEEEccCH-HHHHhhCCEEEEEECC
Q psy7366 476 RTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNM-EECEALCTKLTIMVNG 553 (566)
Q Consensus 476 ~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvl~vsHd~-~~~~~~~drv~~l~~G 553 (566)
+.|||||||||.||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+. +++..+||+|++|++|
T Consensus 335 rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G 414 (1470)
T PLN03140 335 RGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEG 414 (1470)
T ss_pred cCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCc
Confidence 89999999999999999999999999999999999999999999999976 489999999996 6888999999999999
Q ss_pred EEEEecCccccc
Q psy7366 554 QFTCLGSATHLK 565 (566)
Q Consensus 554 ~i~~~g~~~~l~ 565 (566)
++++.|+.+++.
T Consensus 415 ~ivy~G~~~~~~ 426 (1470)
T PLN03140 415 QIVYQGPRDHIL 426 (1470)
T ss_pred eEEEeCCHHHHH
Confidence 999999987653
No 377
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.1e-36 Score=285.62 Aligned_cols=179 Identities=27% Similarity=0.481 Sum_probs=166.6
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNK 77 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 77 (566)
.|||||+|+|++++-+++ .+.+.+.. .....+|||+|.+..||+.+||.|.+.|+++.+|++..++..++..+|++
T Consensus 39 AGKTTtfRmILglle~~~G~I~~~g~~~~-~~~~~rIGyLPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer 117 (300)
T COG4152 39 AGKTTTFRMILGLLEPTEGEITWNGGPLS-QEIKNRIGYLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLER 117 (300)
T ss_pred CCccchHHHHhccCCccCceEEEcCcchh-hhhhhhcccChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 499999999999998876 24443322 23345799999999999999999999999999999999999999999999
Q ss_pred cCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhhc
Q psy7366 78 FALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALC 157 (566)
Q Consensus 78 ~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~ 157 (566)
+++.....+++.+||.|++||+.+..+++++|+++|||||+|||||...+.|.+.+.++++.|.|||++||+|+.++++|
T Consensus 118 ~~i~~~~~~kIk~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLC 197 (300)
T COG4152 118 LEIVGKKTKKIKELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELC 197 (300)
T ss_pred ccccccccchHHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChhHHHhh
Q psy7366 158 TKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 158 d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
|++++|++|+.|.+|+.++++..
T Consensus 198 D~llmL~kG~~V~~G~v~~ir~~ 220 (300)
T COG4152 198 DRLLMLKKGQTVLYGTVEDIRRS 220 (300)
T ss_pred hhhheecCCceEEeccHHHHHHh
Confidence 99999999999999999998764
No 378
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.1e-36 Score=306.63 Aligned_cols=179 Identities=32% Similarity=0.535 Sum_probs=159.6
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc--ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID--KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~--~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.|++ .+.+.+.... ...++||||||++.+++.+||+||+.|....++.+..+..+++.+++
T Consensus 44 aGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 123 (306)
T PRK13537 44 AGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLL 123 (306)
T ss_pred CCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 599999999999998766 2334332211 22457999999999999999999999887777777666778899999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.+++....++++++||||||||++||+||+++|++|||||||+||||.++.+++++|++++++|+|||++||+++++++
T Consensus 124 ~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~ 203 (306)
T PRK13537 124 EFAKLENKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAER 203 (306)
T ss_pred HHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 99999988999999999999999999999999999999999999999999999999999998789999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+||||++|++|++++.|+++++..
T Consensus 204 ~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 204 LCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred hCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999998764
No 379
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-36 Score=296.15 Aligned_cols=180 Identities=23% Similarity=0.302 Sum_probs=164.2
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc-------ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID-------KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~-------~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
+||||++|+++.++-|+. .+.+.....- -+..+++||||.+.|+|..||.||..|+.+..|+++.+-+++
T Consensus 65 SGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~ 144 (386)
T COG4175 65 SGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREER 144 (386)
T ss_pred CCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHH
Confidence 599999999999998776 2444332211 134579999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++|+.+||..+.++++.+|||||||||.|||||+.+|+|||+|||+|+|||--|.++++-|.+|.++ .+||+|||||
T Consensus 145 a~~~l~~VgL~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHD 224 (386)
T COG4175 145 ALEALELVGLEGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHD 224 (386)
T ss_pred HHHHHHHcCchhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999999999655 9999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
++|+.++.|||.+|++|+|+..|+++++...
T Consensus 225 LdEAlriG~rIaimkdG~ivQ~Gtp~eIl~~ 255 (386)
T COG4175 225 LDEALRIGDRIAIMKDGEIVQVGTPEEILLN 255 (386)
T ss_pred HHHHHhccceEEEecCCeEEEeCCHHHHHcC
Confidence 9999999999999999999999999998654
No 380
>COG4778 PhnL ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=270.21 Aligned_cols=211 Identities=25% Similarity=0.394 Sum_probs=183.6
Q ss_pred eEEEeeeEEEeCCcC-C--CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCC----C-c
Q psy7366 342 VLVVKRLFKIYANSK-G--TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIR----D-S 413 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~-~--~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~----~-~ 413 (566)
.|.++|++|+|---. + .-++|+++||+|+.|||++|=||+|+|||||||+|.|-|.|++|+|++....-+ . .
T Consensus 4 ~l~v~~~~KtFtlH~q~Gi~LpV~~~vslsV~aGECvvL~G~SG~GKStllr~LYaNY~~d~G~I~v~H~g~~vdl~~a~ 83 (235)
T COG4778 4 PLNVSNVSKTFTLHQQGGVRLPVLRNVSLSVNAGECVVLHGPSGSGKSTLLRSLYANYLPDEGQILVRHEGEWVDLVTAE 83 (235)
T ss_pred eeeeecchhheEeeecCCEEeeeeeceeEEecCccEEEeeCCCCCcHHHHHHHHHhccCCCCceEEEEeCcchhhhhccC
Confidence 588999999884210 1 246899999999999999999999999999999999999999999998654321 1 1
Q ss_pred ----hHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCC-CccccCcCcCChhHHHHHHH
Q psy7366 414 ----MDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLST 488 (566)
Q Consensus 414 ----~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LSgGqkqrv~l 488 (566)
....++.||||+|.....|..+..|.++-+....+.+.+....++..++.++++. .++.-.|.++||||||||.|
T Consensus 84 pr~vl~vRr~TiGyVSQFLRviPRV~aLdVvaePll~~gv~~~~a~~~a~~Ll~rLnlperLW~LaPaTFSGGEqQRVNI 163 (235)
T COG4778 84 PREVLEVRRTTIGYVSQFLRVIPRVSALDVVAEPLLARGVPREVARAKAADLLTRLNLPERLWSLAPATFSGGEQQRVNI 163 (235)
T ss_pred hHHHHHHHHhhhHHHHHHHHhccCcchHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCCHHHhcCCCcccCCchheehhh
Confidence 1234577999999987788888888888777777888888888999999999997 46778899999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEEC
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVN 552 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~ 552 (566)
||.++.+-+||||||||++||..+++.+.++|++.+.+|.++|=+-||.+-=+.+|||++-|..
T Consensus 164 aRgfivd~pILLLDEPTasLDa~Nr~vVveli~e~Ka~GaAlvGIFHDeevre~vadR~~~~~~ 227 (235)
T COG4778 164 ARGFIVDYPILLLDEPTASLDATNRAVVVELIREAKARGAALVGIFHDEEVREAVADRLLDVSA 227 (235)
T ss_pred hhhhhccCceEEecCCcccccccchHHHHHHHHHHHhcCceEEEeeccHHHHHHHhhheeeccc
Confidence 9999999999999999999999999999999999888899999999998888889999988754
No 381
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=5.4e-34 Score=337.33 Aligned_cols=351 Identities=19% Similarity=0.201 Sum_probs=256.7
Q ss_pred CCCCHHHHHHHHHHhcCCChh----hHHHHHHHHHHHcCCCc-ccccccccCChhHHHHHHHHHHHhCC--CCEEEeeCC
Q psy7366 45 DRLTPREHLEFYSRVRNVPSV----LLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGN--PPLIFLDEP 117 (566)
Q Consensus 45 ~~~tv~e~l~~~~~~~~~~~~----~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~kqrl~iA~al~~~--p~vLlLDEP 117 (566)
..|++.|.+.|......-... ++..|+ +.|..+||+. -++|...+|||||-||+-||..|-++ -=++|||||
T Consensus 1338 ~~l~i~~~~~~~~~l~~~~a~~il~ei~~Rl-~~l~~vGL~YLtL~R~~~TLSGGE~QRirLa~~lgs~L~gvlYVLDEP 1416 (1809)
T PRK00635 1338 YQEDVTFLKKFLLTIHDDEEPSIIQDLLNRL-TFIDKVGLSYITLGQEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDP 1416 (1809)
T ss_pred HhCCHHHHHHHHHhccchhHHHHHHHHHHHH-HHHHhCCCCcccccCCCCCCcchHHHHHHHHHHhcCCCceeEEEeCCC
Confidence 457888888876554211111 122222 3556789987 57999999999999999999999975 468999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEE------eCCEEEEecChhHHHhhccCccccCCCC
Q psy7366 118 TSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLGSATHLKSKSMALPVSGNDL 191 (566)
Q Consensus 118 t~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl------~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 191 (566)
|.||-|...+.|.+.|++|++.|.|||+|+||.+.+.. ||+|+.| ..|+|++.|+++++... .
T Consensus 1417 SiGLHp~D~~~Li~~L~~Lrd~GNTvivVEHd~~~i~~-AD~iidiGPgAG~~GG~iv~~G~~~~l~~~---~------- 1485 (1809)
T PRK00635 1417 LSGLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEH-ADHLIHLGPGSGPQGGYLLSTSALKQSQPD---L------- 1485 (1809)
T ss_pred CcCCChhHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHh-CCEEEEeCCCccCCCCEEEecCCHHHHhhh---c-------
Confidence 99999999999999999999999999999999988875 9999999 46899999999886320 0
Q ss_pred CCCCccchhHHHhhccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeee
Q psy7366 192 GRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAV 271 (566)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (566)
.. .
T Consensus 1486 --------------~~------~--------------------------------------------------------- 1488 (1809)
T PRK00635 1486 --------------HN------T--------------------------------------------------------- 1488 (1809)
T ss_pred --------------cc------c---------------------------------------------------------
Confidence 00 0
Q ss_pred ccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEE
Q psy7366 272 NIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKI 351 (566)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 351 (566)
.. .. . .+.|++ +.+.
T Consensus 1489 --------------------------------------------------~~-----~~-~-------~~~l~l-~a~~- 1503 (1809)
T PRK00635 1489 --------------------------------------------------RS-----SE-E-------TPTLSV-SLSI- 1503 (1809)
T ss_pred --------------------------------------------------cc-----cc-c-------CcEEEE-eccc-
Confidence 00 00 0 002445 4321
Q ss_pred eCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHH----------CCCCCCccEEEEcCccCCCc----h---
Q psy7366 352 YANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLT----------GAIKPTSGNAYVMNHSIRDS----M--- 414 (566)
Q Consensus 352 y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~----------G~~~~~~G~i~~~g~~~~~~----~--- 414 (566)
.=|+|++.+|+-|..++|.|.+|||||||++-.. |.. .-+--|.++-.++... +
T Consensus 1504 --------nNLk~v~v~iPlg~l~~vTGVSGSGKStLi~~~l~~~l~~~l~~g~~-~~~~vi~vdQspIgrt~RS~paTY 1574 (1809)
T PRK00635 1504 --------HTIQNLNVSAPLHSLVAISGVSGSGKTSLLLEGFYKQACALIEKGPS-VFSEIIFLDSHPQISSQRSDISTY 1574 (1809)
T ss_pred --------ccCCcceeeccCCcEEEEeCCCCCcHHHHHHHHHHHHHHHHhccccc-ccCcEEEEeCCCCCCCCCCchhhh
Confidence 1389999999999999999999999999997444 221 1123466776655321 0
Q ss_pred ----HHhcCc--------------------------------------eEEEecCC-----------------CCC----
Q psy7366 415 ----DLVRSY--------------------------------------IGYCPQFD-----------------ALN---- 431 (566)
Q Consensus 415 ----~~~~~~--------------------------------------i~~v~q~~-----------------~l~---- 431 (566)
..+|+- +.|+|+-. .-|
T Consensus 1575 ~g~fd~IR~lFA~~~~ak~rg~~~~~FSfN~~~GrC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~~e~L~v~~~gk~ 1654 (1809)
T PRK00635 1575 FDIAPSLRNFYASLTQAKALNISASMFSTNTKQGQCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQPLAQEVVYEGKH 1654 (1809)
T ss_pred hhhHHHHHHHHhcCHHHHHcCCCcccccccCCCCCCCCCccCceEEEecccCCCcccCCCCCCCcCCCHHHHhheeCCCC
Confidence 111110 11222100 001
Q ss_pred ----CCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHHHHcCC---CCEEEEeC
Q psy7366 432 ----DRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGN---PPLIFLDE 503 (566)
Q Consensus 432 ----~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~~~---p~lllLDE 503 (566)
-+|||.|-+.|+.. . .. -.+.-+.|..+||.. .+.++..+|||||.||+-||..|..+ +.++||||
T Consensus 1655 I~dvL~mtv~ea~~~F~~---~--~~-i~~~L~~L~~vGLgYl~LGq~~~tLSGGE~qRikLa~~l~~~~~~~~lyilDE 1728 (1809)
T PRK00635 1655 FGQLLQTPIEEVAETFPF---L--KK-IQKPLQALIDNGLGYLPLGQNLSSLSLSEKIAIKIAKFLYLPPKHPTLFLLDE 1728 (1809)
T ss_pred HHHHhcCCHHHHHHHhhc---c--HH-HHHHHHHHHHcCCCeeeCCCcCCccCchHHHHHHHHHHHhcCCCCCcEEEEcC
Confidence 13455555444421 1 11 233457788899975 46899999999999999999999876 78999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEE------CCEEEEecCccccc
Q psy7366 504 PTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMV------NGQFTCLGSATHLK 565 (566)
Q Consensus 504 Pt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~------~G~i~~~g~~~~l~ 565 (566)
||.||++...+.++++|+++.+.|.|||+|.||++.+.. ||+++-|- .|+|++.|+|+++.
T Consensus 1729 Pt~GLh~~d~~~Ll~~l~~L~~~g~tvivieH~~~~i~~-aD~iidlgp~gG~~GG~iva~Gtp~~i~ 1795 (1809)
T PRK00635 1729 IATSLDNQQKSALLVQLRTLVSLGHSVIYIDHDPALLKQ-ADYLIEMGPGSGKTGGKILFSGPPKDIS 1795 (1809)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHh-CCEEEEcCCCcccCCCEEEEEeCHHHHh
Confidence 999999999999999999999999999999999999887 99999984 47899999999874
No 382
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-36 Score=278.83 Aligned_cols=180 Identities=28% Similarity=0.394 Sum_probs=159.6
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCc----ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChh--hHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPT----IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSV--LLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~----~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~--~~~~~~ 71 (566)
.||||++.|++|++.+++ .+++.+.. ....+.+|||+||+++.|..+||+||+....+....+.+ +.+.++
T Consensus 41 AGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l 120 (243)
T COG1137 41 AGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEEL 120 (243)
T ss_pred CCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHH
Confidence 499999999999999887 22332211 123356899999999999999999999988887654444 344467
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
+++|+.|+|.+..+++..+||||||+|++|||||+.+|+++|||||++|.||.++.++.++++.|++.|..|+++.|+..
T Consensus 121 ~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR 200 (243)
T COG1137 121 DALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR 200 (243)
T ss_pred HHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
|...+|||.+++.+|++.+.|+++++..+
T Consensus 201 EtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 201 ETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 99999999999999999999999998754
No 383
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=100.00 E-value=7.7e-34 Score=305.94 Aligned_cols=369 Identities=23% Similarity=0.360 Sum_probs=257.3
Q ss_pred CCCCHHHHHHHHHHhcCCChh---hHHHHHH------HHHHHcCCCc-ccccccccCChhHHHHHHHHHHHhCCC--CEE
Q psy7366 45 DRLTPREHLEFYSRVRNVPSV---LLNTIVN------ESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNP--PLI 112 (566)
Q Consensus 45 ~~~tv~e~l~~~~~~~~~~~~---~~~~~~~------~~l~~~gl~~-~~~~~~~~LSgG~kqrl~iA~al~~~p--~vL 112 (566)
..|++.+.+.|+.... ++.. ....-++ ..|-.+||+. -++|...+|||||.||+-||..+-++= =++
T Consensus 427 ~~msi~~~~~f~~~l~-l~~~~~~ia~~ilkei~~RL~fL~~VGL~YLtL~R~a~TLSGGEaQRIRLAtqiGS~LtGVlY 505 (935)
T COG0178 427 SEMSIADALEFFENLK-LSEKEKKIAEPILKEIKERLGFLVDVGLGYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLY 505 (935)
T ss_pred hhccHHHHHHHHHhCC-CchhhHHHHHHHHHHHHHHHHHHHHcCcCcccccccCCCcChhHHHHHHHHHHhcccceeeEE
Confidence 4578888888875443 2211 1111122 2344568886 479999999999999999999998754 589
Q ss_pred EeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEE------eCCEEEEecChhHHHhhccCccc
Q psy7366 113 FLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLGSATHLKSKSMALPV 186 (566)
Q Consensus 113 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl------~~G~i~~~g~~~~~~~~~~~~~~ 186 (566)
|||||+.||=+..-+.|.+.|++|++.|.|+|+|+||-+.+.. ||+|+.| +.|+|++.|+++++......+..
T Consensus 506 VLDEPSIGLHqrDn~rLi~tL~~LRDlGNTviVVEHDedti~~-AD~iIDiGPgAG~~GGeIv~~Gtp~~i~~~~~SlTG 584 (935)
T COG0178 506 VLDEPSIGLHQRDNERLIETLKRLRDLGNTVIVVEHDEDTIRA-ADHIIDIGPGAGEHGGEIVAEGTPEELLANPESLTG 584 (935)
T ss_pred EecCCccCCChhhHHHHHHHHHHHHhcCCeEEEEecCHHHHhh-cCEEEeeCCCCCcCCCEEEEccCHHHHHhCCcchhh
Confidence 9999999999999999999999999999999999999887765 9999998 46899999999998654211100
Q ss_pred cCCCCCCCCccchhHHHhhccCCCCccccCCCcccccccccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCe
Q psy7366 187 SGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGFYNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGT 266 (566)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (566)
..+.+. +
T Consensus 585 ----------------~YLsg~-----~---------------------------------------------------- 591 (935)
T COG0178 585 ----------------QYLSGK-----K---------------------------------------------------- 591 (935)
T ss_pred ----------------HhhcCC-----c----------------------------------------------------
Confidence 000000 0
Q ss_pred eeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEe
Q psy7366 267 RLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVK 346 (566)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (566)
.. ..+ ..+.. ..+..|+++
T Consensus 592 -------------------------------------------------~i----~vP---~~rr~-----~~~~~L~l~ 610 (935)
T COG0178 592 -------------------------------------------------TI----EVP---KKRRA-----PNGKWLELK 610 (935)
T ss_pred -------------------------------------------------cc----CCc---ccccC-----CCCCeEEEe
Confidence 00 000 00100 112257777
Q ss_pred eeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHH---------HHHCC-CCCC-----cc------EEEE
Q psy7366 347 RLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFK---------MLTGA-IKPT-----SG------NAYV 405 (566)
Q Consensus 347 ~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~---------~i~G~-~~~~-----~G------~i~~ 405 (566)
+.+. .=|+||+.+|+=|-+++|.|-+|||||||++ -+.+. ..|. .| -|.+
T Consensus 611 gA~~---------nNLkni~v~iPLg~~t~VTGVSGSGKSTLIn~tL~~a~~~~l~~~~~~p~~~~~i~G~e~idkvI~I 681 (935)
T COG0178 611 GARR---------NNLKNIDVEIPLGVFTCVTGVSGSGKSTLINDTLVPALARHLNGTKEEPGPYKKIEGLEHIDKVIDI 681 (935)
T ss_pred cccc---------cCcccceeecccccEEEEEecCCCCHHHhHHHHHHHHHHHHhccCCCCCCCcceeechhhcCeEEEe
Confidence 6642 2389999999999999999999999999992 23331 1111 12 1344
Q ss_pred cCccCCC----ch-------HHhcC----------------c----------------------eEE-----EecCC---
Q psy7366 406 MNHSIRD----SM-------DLVRS----------------Y----------------------IGY-----CPQFD--- 428 (566)
Q Consensus 406 ~g~~~~~----~~-------~~~~~----------------~----------------------i~~-----v~q~~--- 428 (566)
+-.++.+ ++ ..+|. + +.| ||-+.
T Consensus 682 dQsPIGRTpRSNPATYtg~Fd~IR~lFA~tpeAK~rGyk~grFSFNvkGGRCe~C~GdG~ikIeM~FLpdVyv~CevC~G 761 (935)
T COG0178 682 DQSPIGRTPRSNPATYTGVFDDIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCHG 761 (935)
T ss_pred cCCCCCCCCCCCccchhcchHHHHHHHhcChHHHHcCCCcccccccCCCcCCccccCCceEEEEeccCCCceeeCCCcCC
Confidence 4444321 10 00000 0 111 22110
Q ss_pred ---------CCCC--------CCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHH
Q psy7366 429 ---------ALND--------RLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 429 ---------~l~~--------~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~ 490 (566)
..|. +|||.|-..|+.. .+. -.+..+.|..+||.. .+.++..+|||||.|||-||.
T Consensus 762 kRYn~EtLev~ykGK~IadVL~MTveEA~~FF~~---~p~---I~rkLqtL~dVGLgYi~LGQpatTLSGGEaQRvKLA~ 835 (935)
T COG0178 762 KRYNRETLEVKYKGKNIADVLDMTVEEALEFFEA---IPK---IARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAK 835 (935)
T ss_pred cccccceEEEEECCccHHHHHhccHHHHHHHHhc---chH---HHHHHHHHHHcCcceEecCCccccccchHHHHHHHHH
Confidence 0011 3455554444432 111 123345677789874 468999999999999999999
Q ss_pred HHcCCC---CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEE------ECCEEEEecCc
Q psy7366 491 ALLGNP---PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLGSA 561 (566)
Q Consensus 491 al~~~p---~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l------~~G~i~~~g~~ 561 (566)
-|.... -++||||||.||-..-.+.+++.|.++...|-|||+|-|+++.+. .||+|+-| ..|+|++.|+|
T Consensus 836 EL~k~~tg~TlYiLDEPTTGLH~~Di~kLl~VL~rLvd~GnTViVIEHNLdVIk-~AD~IIDLGPeGG~~GG~iva~GTP 914 (935)
T COG0178 836 ELSKRSTGKTLYILDEPTTGLHFDDIKKLLEVLHRLVDKGNTVIVIEHNLDVIK-TADWIIDLGPEGGDGGGEIVASGTP 914 (935)
T ss_pred HHhhccCCCeEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecccceEe-ecCEEEEcCCCCCCCCceEEEecCH
Confidence 999877 899999999999999999999999999999999999999999886 49999998 45789999999
Q ss_pred cccc
Q psy7366 562 THLK 565 (566)
Q Consensus 562 ~~l~ 565 (566)
+++-
T Consensus 915 eeva 918 (935)
T COG0178 915 EEVA 918 (935)
T ss_pred HHHH
Confidence 9873
No 384
>KOG0061|consensus
Probab=100.00 E-value=1.8e-35 Score=327.52 Aligned_cols=221 Identities=30% Similarity=0.421 Sum_probs=195.0
Q ss_pred eEEEeeeEEEeCCcC-CCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCC---CccEEEEcCccCCCchHHh
Q psy7366 342 VLVVKRLFKIYANSK-GTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP---TSGNAYVMNHSIRDSMDLV 417 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~-~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~---~~G~i~~~g~~~~~~~~~~ 417 (566)
.+..++++....... ..+.+|++||.++++||++||+||+||||||||++|+|.... .+|+|.+||++.. .+..
T Consensus 25 ~~~~~~~~~~~~~~~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG~~~~--~~~~ 102 (613)
T KOG0061|consen 25 KLSFRNLTLSSKEKSKKTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNGRPRD--SRSF 102 (613)
T ss_pred eeEEEEEEEEecCCCCccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECCccCc--hhhh
Confidence 367778877664321 247899999999999999999999999999999999999874 6899999996543 3456
Q ss_pred cCceEEEecCCCCCCCCCHHHHHHHHHHhcC---CCchHHHHHHHHHHHHcCCCCccccCcC-----cCChhHHHHHHHH
Q psy7366 418 RSYIGYCPQFDALNDRLTPREHLEFYSRVRN---VPSVLLNTIVNESLNKFALGHYSDREVR-----TLSGGNKRKLSTA 489 (566)
Q Consensus 418 ~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGqkqrv~la 489 (566)
++..|||.|+..+++.+||+|++.+.+.++- .+..+.+.+++++++.+||.+..|..++ .+|||||+||+||
T Consensus 103 ~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia 182 (613)
T KOG0061|consen 103 RKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIA 182 (613)
T ss_pred hheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHH
Confidence 7789999999999999999999999877642 2446677899999999999988888886 5999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCH-HHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNM-EECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~-~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.-|+.+|.||+|||||+|||..+...+.+.|++++++|+|||++-|.+ .++.++.|++++|.+|++++.|+++++
T Consensus 183 ~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~ 258 (613)
T KOG0061|consen 183 LELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPREL 258 (613)
T ss_pred HHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHH
Confidence 999999999999999999999999999999999999999999999998 467778999999999999999998765
No 385
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=307.58 Aligned_cols=180 Identities=24% Similarity=0.388 Sum_probs=160.9
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc-ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcC-CChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT-IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRN-VPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~-~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~-~~~~~~~~~~~~~l 75 (566)
+||||++|+|.|+..|+.. +.+.+.. ....++.||||||+..|||.|||+||++|+.+..+ ....++.+++.+++
T Consensus 42 cGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L 121 (352)
T COG3842 42 CGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEAL 121 (352)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHH
Confidence 6999999999999987772 3332221 12345679999999999999999999999998544 45567899999999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHH
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECE 154 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~ 154 (566)
+.++|+...++++.+|||||||||+|||||+.+|+|||||||.++||..-|.++..-|+++.+ .|.|.|++|||-+|+.
T Consensus 122 ~lV~L~~~~~R~p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl 201 (352)
T COG3842 122 ELVGLEGFADRKPHQLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEAL 201 (352)
T ss_pred HHcCchhhhhhChhhhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999865 4999999999999999
Q ss_pred hhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 155 ALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 155 ~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
.++|||+||++|+|...|+++++...
T Consensus 202 ~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 202 AMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred hhccceEEccCCceeecCCHHHHhhC
Confidence 99999999999999999999998754
No 386
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=4.5e-36 Score=337.50 Aligned_cols=215 Identities=20% Similarity=0.267 Sum_probs=166.1
Q ss_pred CeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCC---CCCccEEEEcCccCCC---c-
Q psy7366 341 DVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAI---KPTSGNAYVMNHSIRD---S- 413 (566)
Q Consensus 341 ~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~---~~~~G~i~~~g~~~~~---~- 413 (566)
.+|.++|+++.|+ ++.+|+|+||+|.+|+++||+||||||||||||+|+|.. .|++|+|.+.++.+.. .
T Consensus 176 ~~I~i~nls~~y~----~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~~g~p~~g~I~~~~Q~~~g~~~t~ 251 (718)
T PLN03073 176 KDIHMENFSISVG----GRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAIDGIPKNCQILHVEQEVVGDDTTA 251 (718)
T ss_pred eeEEEceEEEEeC----CCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCCCCEEEEEeccCCCCCCCH
Confidence 4799999999996 456999999999999999999999999999999999964 5789999876554211 0
Q ss_pred -----------hHHhcCceEEEecCCCCCCC-CC---------------HHHHHHHH-HHhcCCCchHHHHHHHHHHHHc
Q psy7366 414 -----------MDLVRSYIGYCPQFDALNDR-LT---------------PREHLEFY-SRVRNVPSVLLNTIVNESLNKF 465 (566)
Q Consensus 414 -----------~~~~~~~i~~v~q~~~l~~~-~t---------------v~e~l~~~-~~~~~~~~~~~~~~~~~~l~~~ 465 (566)
....+..++|++|++.+... .+ +.+-+.-. ..+........+.++.+++..+
T Consensus 252 ~~~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~r~~~~L~~l 331 (718)
T PLN03073 252 LQCVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDKDAVSQRLEEIYKRLELIDAYTAEARAASILAGL 331 (718)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHC
Confidence 01123446777776432111 00 10111100 0111111123456678889999
Q ss_pred CCC-CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhC
Q psy7366 466 ALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALC 544 (566)
Q Consensus 466 ~l~-~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~ 544 (566)
|+. ...++++.+|||||||||+||+||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+|
T Consensus 332 gl~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~~tviivsHd~~~l~~~~ 408 (718)
T PLN03073 332 SFTPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKW---PKTFIVVSHAREFLNTVV 408 (718)
T ss_pred CCChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHHHHHHhC
Confidence 996 5678999999999999999999999999999999999999999999999999887 789999999999999999
Q ss_pred CEEEEEECCEEE-EecCcc
Q psy7366 545 TKLTIMVNGQFT-CLGSAT 562 (566)
Q Consensus 545 drv~~l~~G~i~-~~g~~~ 562 (566)
|++++|++|++. +.|+.+
T Consensus 409 d~i~~l~~g~i~~~~g~~~ 427 (718)
T PLN03073 409 TDILHLHGQKLVTYKGDYD 427 (718)
T ss_pred CEEEEEECCEEEEeCCCHH
Confidence 999999999996 566654
No 387
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.8e-35 Score=303.62 Aligned_cols=179 Identities=26% Similarity=0.342 Sum_probs=158.5
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc------ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID------KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~------~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+|++++.|++ .+.+...... ...++|||+||++.+++.+||.||+.+.....+.+..+..+++
T Consensus 42 aGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v 121 (343)
T TIGR02314 42 AGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKV 121 (343)
T ss_pred CCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 599999999999998765 2333322110 1245799999999999999999999998776667777788899
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCCh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM 150 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~ 150 (566)
.++++.+||.+..++++.+|||||||||+|||||+.+|++|||||||++|||.++.+++++|++++++ |.|||+|||++
T Consensus 122 ~e~l~~vgL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~ 201 (343)
T TIGR02314 122 TELLALVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEM 201 (343)
T ss_pred HHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999765 99999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+++.++||||++|++|++++.|+++++..
T Consensus 202 ~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 202 DVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999988754
No 388
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=306.08 Aligned_cols=180 Identities=23% Similarity=0.324 Sum_probs=158.7
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+|.|+..+++. +.+..... ....+.||||||++.+|+.+||+||+.|+....+.+..+..+++.++++
T Consensus 41 sGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~ 120 (356)
T PRK11650 41 CGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAAR 120 (356)
T ss_pred CcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHH
Confidence 5999999999999987651 22221111 1123579999999999999999999999876666666777788999999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+||+...++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.|+++.++ |.|+|++|||++++..
T Consensus 121 ~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~ 200 (356)
T PRK11650 121 ILELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMT 200 (356)
T ss_pred HcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998765 9999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+||||++|++|+++..|+++++...
T Consensus 201 l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 201 LADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred hCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999988653
No 389
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.7e-35 Score=300.10 Aligned_cols=179 Identities=38% Similarity=0.633 Sum_probs=157.9
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.|++ .+.+..... ......|||+||++.+++.+||.||+.+....++.+..+..+++.+++
T Consensus 30 aGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 109 (302)
T TIGR01188 30 AGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRENLEMMGRLYGLPKDEAEERAEELL 109 (302)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 599999999999998765 233322111 112346999999999999999999999887766666666677899999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.+||....++++.+||||||||++||+||+++|++|||||||+||||.++++++++|++++++|.|||++||+++++.+
T Consensus 110 ~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~ 189 (302)
T TIGR01188 110 ELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADK 189 (302)
T ss_pred HHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 99999988999999999999999999999999999999999999999999999999999998789999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+||||++|++|+++..|+++++..
T Consensus 190 ~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 190 LCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred hCCEEEEEECCEEEEECCHHHHHH
Confidence 999999999999999999988754
No 390
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=303.89 Aligned_cols=180 Identities=25% Similarity=0.329 Sum_probs=159.7
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+|.|+..++.. +.+..... ....+.||||||++.+|+.+||+||+.|+...++.+..+..+++.++++
T Consensus 43 sGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~ 122 (351)
T PRK11432 43 CGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALE 122 (351)
T ss_pred CcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHH
Confidence 5999999999999987652 33322111 1223579999999999999999999999887767777778889999999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+||....++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.|+++.++ |.|+|++|||++++..
T Consensus 123 ~~gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~ 202 (351)
T PRK11432 123 LVDLAGFEDRYVDQISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFA 202 (351)
T ss_pred HcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999665 9999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+||||++|++|+++..|+++++...
T Consensus 203 laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 203 VSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999988653
No 391
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=6e-35 Score=303.81 Aligned_cols=180 Identities=22% Similarity=0.287 Sum_probs=159.2
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc---ccc----ccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI---DKN----LSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~---~~~----~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.|.. .+.+..... ... .+.||||||++.+++.+||.||+.|..+..+++..+..++
T Consensus 30 sGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~TV~eNi~~~~~~~~~~~~~~~~~ 109 (363)
T TIGR01186 30 SGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHMTILQNTSLGPELLGWPEQERKEK 109 (363)
T ss_pred ChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCCCHHHHHHHHHHHcCCCHHHHHHH
Confidence 599999999999997765 233322111 111 4579999999999999999999999887777777777889
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++++.+||+...++++.+|||||||||+|||||+.+|++|||||||++|||.+++++.+.|.++.++ |+|||++|||
T Consensus 110 ~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd 189 (363)
T TIGR01186 110 ALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHD 189 (363)
T ss_pred HHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 999999999998999999999999999999999999999999999999999999999999999999654 9999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
++++..+||||++|++|+++..|+++++...
T Consensus 190 ~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 190 LDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred HHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 9999999999999999999999999987643
No 392
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=7.2e-35 Score=302.01 Aligned_cols=180 Identities=32% Similarity=0.533 Sum_probs=158.6
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.|++ .+.|..... ......|||+||++.+++.+||.||+.++...++.+..+..+++.+++
T Consensus 78 aGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll 157 (340)
T PRK13536 78 AGKSTIARMILGMTSPDAGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLL 157 (340)
T ss_pred CCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 599999999999998766 233432211 123457999999999999999999999877666665555667788999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.+||....++++.+||||||||++||+||+++|++|||||||+||||.++.+++++|++++++|+|||++||+++++++
T Consensus 158 ~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~ 237 (340)
T PRK13536 158 EFARLESKADARVSDLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAER 237 (340)
T ss_pred HHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 99999998999999999999999999999999999999999999999999999999999998789999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+||||++|++|++++.|+++++...
T Consensus 238 ~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 238 LCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999987643
No 393
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.1e-35 Score=353.68 Aligned_cols=202 Identities=21% Similarity=0.375 Sum_probs=166.3
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.++++|+++.|+.. .++++|+|+||+|++|+.++|+||+|||||||+++|.|+++|++|.+.. .+..|
T Consensus 614 ~I~~~~vsF~y~~~-~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~-----------~~~~I 681 (1495)
T PLN03232 614 AISIKNGYFSWDSK-TSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVV-----------IRGSV 681 (1495)
T ss_pred cEEEEeeEEEcCCC-CCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEE-----------ecCcE
Confidence 58999999999632 1357999999999999999999999999999999999999999987631 24579
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHHH
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTAI 490 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la~ 490 (566)
+||+|+|.+|+. |++|||.|+.. .+ +++..++++..++.+ .......+||||||||++|||
T Consensus 682 ayv~Q~p~Lf~g-TIreNI~fg~~---~~----~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLAR 753 (1495)
T PLN03232 682 AYVPQVSWIFNA-TVRENILFGSD---FE----SERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMAR 753 (1495)
T ss_pred EEEcCccccccc-cHHHHhhcCCc---cC----HHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHH
Confidence 999999999876 99999988632 11 234455555555432 122344579999999999999
Q ss_pred HHcCCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 491 ALLGNPPLIFLDEPTSGMDPGARRFLWTC-IERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 491 al~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|+..+|+|||||||||+||+.+.+.+.+. +... .+++|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 754 Aly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~-l~~kT~IlvTH~~~~l~-~aD~Ii~L~~G~i~~~Gt~~eL~ 827 (1495)
T PLN03232 754 AVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDE-LKGKTRVLVTNQLHFLP-LMDRIILVSEGMIKEEGTFAELS 827 (1495)
T ss_pred HHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhh-hcCCEEEEEECChhhHH-hCCEEEEEeCCEEEEecCHHHHH
Confidence 99999999999999999999998877654 5543 35899999999998865 59999999999999999987763
No 394
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.1e-35 Score=353.27 Aligned_cols=201 Identities=21% Similarity=0.400 Sum_probs=167.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCc-cEEEEcCccCCCchHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTS-GNAYVMNHSIRDSMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~-G~i~~~g~~~~~~~~~~~~~ 420 (566)
.++++|+++.|+.. .++++|+|+||+|++|+.++|+||+|||||||+++|.|+++|++ |+|.+.+ +
T Consensus 614 ~I~~~nvsf~y~~~-~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~------------~ 680 (1622)
T PLN03130 614 AISIKNGYFSWDSK-AERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRG------------T 680 (1622)
T ss_pred ceEEEeeEEEccCC-CCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcC------------e
Confidence 59999999999632 13579999999999999999999999999999999999999999 9998643 6
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-----------ccccCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-----------YSDREVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqkqrv~la 489 (566)
|+||+|+|.+++. |++|||.|+.. . .+++..++++..++.+ .......+||||||||++||
T Consensus 681 Iayv~Q~p~Lfng-TIreNI~fg~~---~----d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLA 752 (1622)
T PLN03130 681 VAYVPQVSWIFNA-TVRDNILFGSP---F----DPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMA 752 (1622)
T ss_pred EEEEcCccccCCC-CHHHHHhCCCc---c----cHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999875 99999988632 1 1334555666555532 12234557999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHH-HHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLW-TCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~-~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
||+..+|+|||||||||+||+++.+.+. +++..+. +|+|+|++||+++.+. .||+|++|++|++++.|+.+++.
T Consensus 753 RAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l-~~kTvIlVTH~l~~l~-~aD~Ii~L~~G~i~e~Gt~~eL~ 827 (1622)
T PLN03130 753 RAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDEL-RGKTRVLVTNQLHFLS-QVDRIILVHEGMIKEEGTYEELS 827 (1622)
T ss_pred HHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHh-cCCEEEEEECCHhHHH-hCCEEEEEeCCEEEEeCCHHHHH
Confidence 9999999999999999999999888775 4565543 5899999999998765 59999999999999999988763
No 395
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.4e-35 Score=303.90 Aligned_cols=180 Identities=22% Similarity=0.296 Sum_probs=159.2
Q ss_pred CCcchHHHHHhccccCCC--c---cCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ--K---VPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNES 74 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~--~---~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~ 74 (566)
.||||++|+|.|+..++. . +.+..... ....+.||||+|++.+|+.+||+||+.|+....+.+..+..+++.++
T Consensus 42 sGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~ 121 (362)
T TIGR03258 42 CGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADA 121 (362)
T ss_pred CCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 599999999999998754 1 22221111 11235799999999999999999999998876677777788899999
Q ss_pred HHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEecCChhH
Q psy7366 75 LNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE--GRCVILTSHNMEE 152 (566)
Q Consensus 75 l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~--g~tviiisH~~~~ 152 (566)
++.+||+...++++.+|||||||||+|||||+.+|++|||||||++||+..+.++.+.|+++.++ |.|+|++|||+++
T Consensus 122 l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~e 201 (362)
T TIGR03258 122 LKLVGLGDAAAHLPAQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDD 201 (362)
T ss_pred HHhcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999776 8999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 153 CEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 153 ~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+..+||||++|++|+++..|+++++...
T Consensus 202 a~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 202 ALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999998653
No 396
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-35 Score=284.08 Aligned_cols=178 Identities=24% Similarity=0.383 Sum_probs=148.4
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcccccccceeEEcCCCCCC--CCCCHHHHHHHHHHhc----CCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTIDKNLSYIGYCPQFDALN--DRLTPREHLEFYSRVR----NVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~~~~~~ig~v~Q~~~l~--~~~tv~e~l~~~~~~~----~~~~~~~~~~~ 71 (566)
.||||++|+|+|++.|.+ .+.+..........+||||||...+. .-+||+|.+.+++..+ +.....-++++
T Consensus 41 aGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v 120 (254)
T COG1121 41 AGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKV 120 (254)
T ss_pred CCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHH
Confidence 499999999999998766 23333222223346799999976443 3479999998763221 12223347889
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
+++|+++|+.+..++++++|||||+|||.|||||+.+|++|||||||+|+|+.++..++++|++++++|+|||+||||++
T Consensus 121 ~~aL~~Vgm~~~~~r~i~~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~ 200 (254)
T COG1121 121 DEALERVGMEDLRDRQIGELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG 200 (254)
T ss_pred HHHHHHcCchhhhCCcccccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
.+.+.||+|+.| |+++++.|++++...
T Consensus 201 ~v~~~~D~vi~L-n~~~~~~G~~~~~~~ 227 (254)
T COG1121 201 LVMAYFDRVICL-NRHLIASGPPEEVLT 227 (254)
T ss_pred HhHhhCCEEEEE-cCeeEeccChhhccC
Confidence 999999999988 567788899888643
No 397
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=9.9e-35 Score=351.65 Aligned_cols=204 Identities=21% Similarity=0.366 Sum_probs=168.9
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCce
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYI 421 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i 421 (566)
.++++|+++.|+. ..+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| +|
T Consensus 636 ~i~~~~~~~~~~~--~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------~i 701 (1522)
T TIGR00957 636 SITVHNATFTWAR--DLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG------------SV 701 (1522)
T ss_pred cEEEEEeEEEcCC--CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC------------EE
Confidence 6999999999963 135799999999999999999999999999999999999999999999987 49
Q ss_pred EEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHH--HHHHHcCC-----CCccccCcCcCChhHHHHHHHHHHHcC
Q psy7366 422 GYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVN--ESLNKFAL-----GHYSDREVRTLSGGNKRKLSTAIALLG 494 (566)
Q Consensus 422 ~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~~l~~~~l-----~~~~~~~~~~LSgGqkqrv~la~al~~ 494 (566)
+||||++.+++ .|++||+.++.. ......++..+ .+.+.++. ....+.+..+||||||||++||||++.
T Consensus 702 ~yv~Q~~~l~~-~Ti~eNI~~g~~---~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~ 777 (1522)
T TIGR00957 702 AYVPQQAWIQN-DSLRENILFGKA---LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYS 777 (1522)
T ss_pred EEEcCCccccC-CcHHHHhhcCCc---cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhc
Confidence 99999998875 599999987532 11211111111 11222222 223456788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHH--HhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 495 NPPLIFLDEPTSGMDPGARRFLWTCIERA--VSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 495 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~--~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
+|+++||||||++||+.+.+.+.+.+.+. ..+++|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 778 ~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~-~D~ii~l~~G~i~~~g~~~~l 848 (1522)
T TIGR00957 778 NADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQ-VDVIIVMSGGKISEMGSYQEL 848 (1522)
T ss_pred CCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhh-CCEEEEecCCeEEeeCCHHHH
Confidence 99999999999999999999999988653 2347999999999999876 999999999999999998775
No 398
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=8.8e-35 Score=302.84 Aligned_cols=180 Identities=25% Similarity=0.305 Sum_probs=159.3
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+|.|+..++. .+.+..... ....+.||||||++.+|+.+||+||+.|+....+.+..+..++++++++
T Consensus 41 sGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~ 120 (353)
T TIGR03265 41 CGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLD 120 (353)
T ss_pred CCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 599999999999987755 233322111 1224579999999999999999999999877666777777889999999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+||+...++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.|+++.++ |.|+|++|||++++..
T Consensus 121 ~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~ 200 (353)
T TIGR03265 121 LVGLPGSERKYPGQLSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALS 200 (353)
T ss_pred HcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998665 9999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+||||++|++|+++..|+++++...
T Consensus 201 l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 201 MADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999988653
No 399
>cd03270 ABC_UvrA_I The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=100.00 E-value=4.5e-34 Score=280.58 Aligned_cols=193 Identities=18% Similarity=0.267 Sum_probs=140.6
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHH-HHHHCCCCCCccEEEEcC-------cc---CCCc-hHHh-cCceEEE
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTF-KMLTGAIKPTSGNAYVMN-------HS---IRDS-MDLV-RSYIGYC 424 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl-~~i~G~~~~~~G~i~~~g-------~~---~~~~-~~~~-~~~i~~v 424 (566)
+..+|+++||+|++||++||+||||||||||+ ..|.. +|++.+.. .. +... .... ....++.
T Consensus 7 ~~~~l~~vsl~i~~Ge~~~l~G~sGsGKSTL~~~~i~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (226)
T cd03270 7 REHNLKNVDVDIPRNKLVVITGVSGSGKSSLAFDTIYA-----EGQRRYVESLSAYARQFLGQMDKPDVDSIEGLSPAIA 81 (226)
T ss_pred hhhccccceeecCCCcEEEEEcCCCCCHHHHHHHHHHH-----HHHHHHhhcccchhhhhhcccCccccccccCCCceEE
Confidence 45699999999999999999999999999995 44431 33322110 00 0000 0011 1234455
Q ss_pred ecCCC--CCCCCCHHH---HHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-ccccCcCcCChhHHHHHHHHHHHcCCC--
Q psy7366 425 PQFDA--LNDRLTPRE---HLEFYSRVRNVPSVLLNTIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNP-- 496 (566)
Q Consensus 425 ~q~~~--l~~~~tv~e---~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~~~p-- 496 (566)
.|++. +.+..++.. ...+..... .......+ .++++.+++.+ ..++++.+|||||||||+|||||+.+|
T Consensus 82 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~-~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~laral~~~p~~ 158 (226)
T cd03270 82 IDQKTTSRNPRSTVGTVTEIYDYLRLLF--ARVGIRER-LGFLVDVGLGYLTLSRSAPTLSGGEAQRIRLATQIGSGLTG 158 (226)
T ss_pred ecCCCCCCCCCccHHHHHHHHHHHHHHh--hhhhHHHH-HHHHHHCCCCcccccCccCcCCHHHHHHHHHHHHHHhCCCC
Confidence 55432 334445442 222221111 11112223 56899999986 589999999999999999999999998
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEE------ECCEEEEec
Q psy7366 497 PLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIM------VNGQFTCLG 559 (566)
Q Consensus 497 ~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l------~~G~i~~~g 559 (566)
++|||||||+|||+.++..+.+.|++++++|.|||++|||++++ .+|||+++| ++|+|+++|
T Consensus 159 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~g~tii~itH~~~~~-~~~d~i~~l~~~~~~~~G~iv~~g 226 (226)
T cd03270 159 VLYVLDEPSIGLHPRDNDRLIETLKRLRDLGNTVLVVEHDEDTI-RAADHVIDIGPGAGVHGGEIVAQG 226 (226)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEEeCHHHH-HhCCEEEEeCCCccccCCEEEecC
Confidence 59999999999999999999999999987799999999999987 589999999 999999876
No 400
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.8e-34 Score=300.60 Aligned_cols=180 Identities=21% Similarity=0.326 Sum_probs=158.5
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+|.|+..+++ .+.+..... ....+.||||||++.+|+.+||.||+.|+....+.+..+..+++.++++
T Consensus 51 sGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~ 130 (375)
T PRK09452 51 CGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALR 130 (375)
T ss_pred CcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Confidence 599999999999998754 123322111 1223579999999999999999999999876666666677788999999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+||+...++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.|+++.++ |.|+|++|||.+++..
T Consensus 131 ~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~ 210 (375)
T PRK09452 131 MVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALT 210 (375)
T ss_pred HcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998765 9999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+||||++|++|+++..|+++++...
T Consensus 211 laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 211 MSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999988654
No 401
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-34 Score=299.99 Aligned_cols=180 Identities=22% Similarity=0.337 Sum_probs=158.5
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+|.|+..+++ .+.+..... ...++.||||||++.+|+.+||.||+.|+....+.+..+..+++.++++
T Consensus 56 sGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~ 135 (377)
T PRK11607 56 CGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLG 135 (377)
T ss_pred CcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 599999999999997765 233322111 1234579999999999999999999999876666667777889999999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~~ 155 (566)
.+||....++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.|+++.+ .|.|+|++|||++++..
T Consensus 136 ~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~ 215 (377)
T PRK11607 136 LVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMT 215 (377)
T ss_pred HcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999855 49999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+||||++|++|+++..|+++++...
T Consensus 216 laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 216 MAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred hCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999999988653
No 402
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=6.1e-34 Score=343.83 Aligned_cols=189 Identities=21% Similarity=0.387 Sum_probs=157.0
Q ss_pred cceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHH
Q psy7366 359 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPRE 438 (566)
Q Consensus 359 ~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e 438 (566)
+++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.++| +|+||+|++.+++. |++|
T Consensus 439 ~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g------------~iayv~Q~~~l~~~-Ti~e 505 (1490)
T TIGR01271 439 TPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG------------RISFSPQTSWIMPG-TIKD 505 (1490)
T ss_pred CcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC------------EEEEEeCCCccCCc-cHHH
Confidence 4689999999999999999999999999999999999999999999988 49999999999875 9999
Q ss_pred HHHHHHHhcCCCchHHHHH-----HHHHHHHcCCC--CccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHH
Q psy7366 439 HLEFYSRVRNVPSVLLNTI-----VNESLNKFALG--HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPG 511 (566)
Q Consensus 439 ~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~--~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~ 511 (566)
|+.|+... ......+. +.+.++.+... .....+..+|||||||||+||||++.+|+++||||||++||+.
T Consensus 506 NI~~g~~~---~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~ 582 (1490)
T TIGR01271 506 NIIFGLSY---DEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVV 582 (1490)
T ss_pred HHHhcccc---chHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHH
Confidence 99876321 11111111 12223332221 1245567899999999999999999999999999999999999
Q ss_pred HHHHHHHH-HHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 512 ARRFLWTC-IERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 512 ~~~~l~~~-l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
+.+.+++. +..+. +|+|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 583 ~~~~i~~~~l~~~~-~~~tvilvtH~~~~~~~-ad~ii~l~~g~i~~~g~~~~l~ 635 (1490)
T TIGR01271 583 TEKEIFESCLCKLM-SNKTRILVTSKLEHLKK-ADKILLLHEGVCYFYGTFSELQ 635 (1490)
T ss_pred HHHHHHHHHHHHHh-cCCeEEEEeCChHHHHh-CCEEEEEECCEEEEEcCHHHHH
Confidence 99999984 56654 48999999999999865 9999999999999999987663
No 403
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.3e-34 Score=283.07 Aligned_cols=179 Identities=25% Similarity=0.337 Sum_probs=153.5
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc---cccccceeEEcCCCCCCCCCCHHHHHHHHHHhc----CCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI---DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR----NVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~---~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~ 70 (566)
+||||++|++++++.|.+ .+.+.+... +...+.++||||.+...+.+||.|.+.++..-+ +....+-.+.
T Consensus 39 ~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~ 118 (258)
T COG1120 39 SGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEI 118 (258)
T ss_pred CCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHH
Confidence 599999999999998655 244433221 223457999999998889999999998875431 1123334457
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~ 149 (566)
+.++|+.+|+.+..+|.+.+||||||||+.||+||+.+|++|+||||||+||...+-+++++++++.+ +|.|||++.||
T Consensus 119 v~~aL~~~~~~~la~r~~~~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHD 198 (258)
T COG1120 119 VEEALELLGLEHLADRPVDELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHD 198 (258)
T ss_pred HHHHHHHhCcHHHhcCcccccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 89999999999999999999999999999999999999999999999999999999999999999974 59999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
++.+.++||++++|++|+++..|+++++..
T Consensus 199 lN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 199 LNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 999999999999999999999999988643
No 404
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-34 Score=273.57 Aligned_cols=178 Identities=25% Similarity=0.351 Sum_probs=153.7
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc----ccccceeEEcCCC--CCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID----KNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~----~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
+||||++|+++|+..+.+ .+.|...... .....|-+||||| ++.|..||++-+.-.....+++. .++++
T Consensus 44 sGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~--~~~~i 121 (252)
T COG1124 44 SGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSK--SQQRI 121 (252)
T ss_pred CCHHHHHHHHhcccCCCCceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhhhhccCCccH--HHHHH
Confidence 599999999999998766 2333222211 2345699999999 57789999999987766655544 45559
Q ss_pred HHHHHHcCCCc-ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 72 NESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 72 ~~~l~~~gl~~-~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
.++|+.+||.. .++|++.+|||||+||++|||||+.+|++||||||||+||+.-+.+++++|.+++++ |.|+||||||
T Consensus 122 ~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHd 201 (252)
T COG1124 122 AELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHD 201 (252)
T ss_pred HHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCc
Confidence 99999999985 789999999999999999999999999999999999999999999999999999765 8899999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+..+..+||||+||++|++++.++.+++...
T Consensus 202 l~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 202 LALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 9999999999999999999999999988755
No 405
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=6.3e-34 Score=291.87 Aligned_cols=179 Identities=32% Similarity=0.541 Sum_probs=155.1
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.|.+ .+.+..... ......|||+||++.+++.+||.||+.+....++.+..+..+++.+++
T Consensus 41 aGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll 120 (303)
T TIGR01288 41 AGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLL 120 (303)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 599999999999987654 122322111 112457999999999999999999998766555555555667788999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.+|+....++++.+||||||||++||+||+.+|++|||||||+|||+.++++++++|++++++|.|||++||+++++.+
T Consensus 121 ~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~ 200 (303)
T TIGR01288 121 EFARLESKADVRVALLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAER 200 (303)
T ss_pred HHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 99999988999999999999999999999999999999999999999999999999999998789999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+||||++|++|+++..|+++++..
T Consensus 201 ~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 201 LCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999988754
No 406
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=298.94 Aligned_cols=179 Identities=24% Similarity=0.334 Sum_probs=156.5
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+|+|++.+++. +.+..... ....+.||||||++.+++.+||.||+.|+....+.+..+..+++.++++
T Consensus 40 sGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~ 119 (369)
T PRK11000 40 CGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAE 119 (369)
T ss_pred CcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHH
Confidence 5999999999999876541 22221111 1123569999999999999999999998876656666667788999999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+||+...++++.+|||||||||+||+||+.+|++|||||||++||+.+++++.+.|+++.++ |.|||++|||++++..
T Consensus 120 ~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~ 199 (369)
T PRK11000 120 VLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMT 199 (369)
T ss_pred HcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence 999998899999999999999999999999999999999999999999999999999998765 9999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+||||++|++|+++..|+++++..
T Consensus 200 ~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 200 LADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999998764
No 407
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.3e-34 Score=291.50 Aligned_cols=178 Identities=27% Similarity=0.429 Sum_probs=157.3
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.++.. +.+..... ....+++||+||++.+++.+||.||+.+....++.+..+..+++++++
T Consensus 39 aGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 118 (301)
T TIGR03522 39 AGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMI 118 (301)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 5999999999999877662 33322211 122357999999999999999999999887777766666677899999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.+||+...++++.+||||||||++||+||+++|++|||||||+|||+.++++++++|+++++ ++|||++||+++++.+
T Consensus 119 ~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~~~~~ 197 (301)
T TIGR03522 119 ELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQEVEA 197 (301)
T ss_pred HHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHHHH
Confidence 999999989999999999999999999999999999999999999999999999999999854 7999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+||||++|++|+++..|+++++..
T Consensus 198 ~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 198 ICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred hCCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999998765
No 408
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.1e-34 Score=296.51 Aligned_cols=180 Identities=23% Similarity=0.331 Sum_probs=156.2
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhc----CCChhhHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR----NVPSVLLNTIVN 72 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~ 72 (566)
.||||++|+|+|++.++.. +.+..... ....+.||||||++.+|+.+||.||+.|..... +.+..+..+++.
T Consensus 39 sGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~ 118 (353)
T PRK10851 39 SGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVT 118 (353)
T ss_pred CCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHH
Confidence 5999999999999876551 22322111 122357999999999999999999999876542 344556778999
Q ss_pred HHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChh
Q psy7366 73 ESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNME 151 (566)
Q Consensus 73 ~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~ 151 (566)
++++.+||+...++++.+|||||||||+|||||+.+|++|||||||++||+..++++.+.|++++++ |.|+|++|||++
T Consensus 119 ~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ 198 (353)
T PRK10851 119 QLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE 198 (353)
T ss_pred HHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999766 899999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
++..+||||++|++|+++..|+++++...
T Consensus 199 ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 199 EAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999998653
No 409
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-34 Score=281.14 Aligned_cols=178 Identities=28% Similarity=0.367 Sum_probs=152.2
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc------cccccceeEEcCCCCCCCCCCHHHHHHHHHHhc-CCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI------DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR-NVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~------~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~ 70 (566)
.||||++|+++|++.|.. .+.+..... ......|||+||++.+++.+||.||+.+..... +.+..+..++
T Consensus 37 sGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~ 116 (235)
T cd03261 37 SGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI 116 (235)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH
Confidence 599999999999987654 122221111 112356999999999999999999998865432 3455556678
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++++.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++ |+|||++||+
T Consensus 117 ~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~ 196 (235)
T cd03261 117 VLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHD 196 (235)
T ss_pred HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecC
Confidence 899999999998889999999999999999999999999999999999999999999999999998764 8999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
++++..+||||++|++|+++..|+++++.
T Consensus 197 ~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 197 LDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999999888764
No 410
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=267.14 Aligned_cols=178 Identities=20% Similarity=0.279 Sum_probs=152.6
Q ss_pred CCcchHHHHHhccc--cC-----------CCccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhH
Q psy7366 1 MGLTTTPKRVVTLL--LT-----------TQKVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLL 67 (566)
Q Consensus 1 ~Gktt~~k~~~~~~--~~-----------~~~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~ 67 (566)
+||||++|+++-+. ++ |+.+.......-..+++||||||.|.-|| +|++||++|+.+..|+...++
T Consensus 44 cGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~~~l 122 (253)
T COG1117 44 CGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKDKEL 122 (253)
T ss_pred cCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccchHHH
Confidence 59999999987542 22 22222211111234568999999999888 999999999999888766888
Q ss_pred HHHHHHHHHHcCCC----cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Q psy7366 68 NTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCV 143 (566)
Q Consensus 68 ~~~~~~~l~~~gl~----~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tv 143 (566)
++.+++.|+...|. +.+++....|||||+||++|||||+-+|+|||||||||+|||.+...+.++|.+|+ +.-||
T Consensus 123 deiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTI 201 (253)
T COG1117 123 DEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTI 201 (253)
T ss_pred HHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEE
Confidence 99999999988875 35688899999999999999999999999999999999999999999999999996 67899
Q ss_pred EEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 144 ILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 144 iiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
|+|||+|.-+.+++|+..++..|++++.|+++++...
T Consensus 202 viVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~ 238 (253)
T COG1117 202 VIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTN 238 (253)
T ss_pred EEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcC
Confidence 9999999999999999999999999999999998654
No 411
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-34 Score=277.72 Aligned_cols=177 Identities=37% Similarity=0.537 Sum_probs=152.1
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc--ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT--IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~--~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.|.+. +.+.... ......+++|+||++.+++.+||.||+.+.....+.+..+..+++.+++
T Consensus 37 sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l 116 (220)
T cd03265 37 AGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELL 116 (220)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 5999999999999876541 2222111 1122356999999999999999999999876655555555677889999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHH
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECE 154 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~ 154 (566)
+.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++ |+|||++||+++++.
T Consensus 117 ~~~~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~ 196 (220)
T cd03265 117 DFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAE 196 (220)
T ss_pred HHcCCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 9999998889999999999999999999999999999999999999999999999999999776 899999999999999
Q ss_pred hhcCEEEEEeCCEEEEecChhHH
Q psy7366 155 ALCTKLTIMVNGQFTCLGSATHL 177 (566)
Q Consensus 155 ~~~d~i~vl~~G~i~~~g~~~~~ 177 (566)
.+||||++|++|+++..|+++++
T Consensus 197 ~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 197 QLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999988877653
No 412
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-34 Score=290.34 Aligned_cols=179 Identities=22% Similarity=0.282 Sum_probs=154.5
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCC---------------------------cccccccceeEEcCCCC-CCCCCCH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNP---------------------------TIDKNLSYIGYCPQFDA-LNDRLTP 49 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~---------------------------~~~~~~~~ig~v~Q~~~-l~~~~tv 49 (566)
.||||++|+++|++.|+.. +.+... .......+||||||+|. .+...||
T Consensus 44 sGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv 123 (305)
T PRK13651 44 SGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTI 123 (305)
T ss_pred CcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccH
Confidence 5999999999999977652 222111 00112357999999973 3345799
Q ss_pred HHHHHHHHHhcCCChhhHHHHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHH
Q psy7366 50 REHLEFYSRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRF 128 (566)
Q Consensus 50 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~ 128 (566)
+||+.|+....+.+..+..+++.++++.+||+ ...++++.+||||||||++||+||+.+|++|||||||++||+.+++.
T Consensus 124 ~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~ 203 (305)
T PRK13651 124 EKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKE 203 (305)
T ss_pred HHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHH
Confidence 99999987777777778888999999999997 67899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 129 LWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 129 l~~~l~~l~~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+.++|++++++|.|||++|||++++.++||||++|++|+++..|+++++..
T Consensus 204 l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 204 ILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999998779999999999999999999999999999999999988754
No 413
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-34 Score=291.06 Aligned_cols=212 Identities=24% Similarity=0.383 Sum_probs=178.6
Q ss_pred eEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCc
Q psy7366 342 VLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSY 420 (566)
Q Consensus 342 ~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~ 420 (566)
.+.+.++++.|. ..+++|+++||++++|+.++++||+|+||||++++|..++.+.+|.|.++|++++. ....+|+-
T Consensus 262 ~v~F~~V~F~y~---~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~a 338 (497)
T COG5265 262 AVAFINVSFAYD---PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRA 338 (497)
T ss_pred eEEEEEEEeecc---ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHH
Confidence 478899999997 37889999999999999999999999999999999999999999999999999976 34567888
Q ss_pred eEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCC-------CCccc----cCcCcCChhHHHHHHHH
Q psy7366 421 IGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFAL-------GHYSD----REVRTLSGGNKRKLSTA 489 (566)
Q Consensus 421 i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~----~~~~~LSgGqkqrv~la 489 (566)
||.||||..||++ |+..|+.++..- ....+ +..+.+...+ ++..+ .+.-.|||||||||+||
T Consensus 339 Ig~VPQDtvLFND-ti~yni~ygr~~--at~ee----v~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaia 411 (497)
T COG5265 339 IGIVPQDTVLFND-TIAYNIKYGRPD--ATAEE----VGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIA 411 (497)
T ss_pred hCcCcccceehhh-hHHHHHhccCcc--ccHHH----HHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHH
Confidence 9999999998876 999999875321 11111 1222222222 22233 34457999999999999
Q ss_pred HHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 490 IALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 490 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|+++++|+||+|||.||+||..+.+++...|++.. .|.|-+++.|.+..+.. ||.|+||++|+|++.|+.+++.
T Consensus 412 r~ilk~p~il~~deatsaldt~te~~iq~~l~~~~-~~rttlviahrlsti~~-adeiivl~~g~i~erg~h~~ll 485 (497)
T COG5265 412 RTILKNPPILILDEATSALDTHTEQAIQAALREVS-AGRTTLVIAHRLSTIID-ADEIIVLDNGRIVERGTHEELL 485 (497)
T ss_pred HHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh-CCCeEEEEeehhhhccC-CceEEEeeCCEEEecCcHHHHH
Confidence 99999999999999999999999999999999875 58999999999999987 9999999999999999998874
No 414
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1e-33 Score=342.16 Aligned_cols=190 Identities=23% Similarity=0.338 Sum_probs=157.4
Q ss_pred CcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcCceEEEecCCCCCCCCCHH
Q psy7366 358 TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPR 437 (566)
Q Consensus 358 ~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~ 437 (566)
++++|+|+||+|++|++++|+|||||||||||++|+|+++|++|+|.+. ++|+|+||++.+++ .|++
T Consensus 672 ~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~~------------~~i~yv~Q~~~l~~-~Tv~ 738 (1560)
T PTZ00243 672 PKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWAE------------RSIAYVPQQAWIMN-ATVR 738 (1560)
T ss_pred CceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEEC------------CeEEEEeCCCccCC-CcHH
Confidence 4569999999999999999999999999999999999999999999863 36999999998875 6999
Q ss_pred HHHHHHHHhcCCCchHHH-----HHHHHHHHHc--CCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCH
Q psy7366 438 EHLEFYSRVRNVPSVLLN-----TIVNESLNKF--ALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDP 510 (566)
Q Consensus 438 e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~ 510 (566)
||+.++... ...... ..+.+.++.+ |+....+.++.+|||||||||+|||||+.+|++|||||||++||+
T Consensus 739 enI~~~~~~---~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~ 815 (1560)
T PTZ00243 739 GNILFFDEE---DAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDA 815 (1560)
T ss_pred HHHHcCChh---hHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCH
Confidence 999875321 111111 1223345555 565566788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCcccc
Q psy7366 511 GARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 564 (566)
Q Consensus 511 ~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l 564 (566)
.+.+.+++.+.....+|+|+|++||+++.+. .||++++|++|++++.|+.+++
T Consensus 816 ~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~-~ad~ii~l~~G~i~~~G~~~~l 868 (1560)
T PTZ00243 816 HVGERVVEECFLGALAGKTRVLATHQVHVVP-RADYVVALGDGRVEFSGSSADF 868 (1560)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEeCCHHHHH-hCCEEEEEECCEEEEecCHHHH
Confidence 9988887643222235899999999999985 6999999999999999998775
No 415
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=293.28 Aligned_cols=179 Identities=26% Similarity=0.365 Sum_probs=155.8
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc---c---ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI---D---KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~---~---~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.|.+ .+.+..... . ...+.|||+||++.+++.+||.||+.+.....+.+..+..+++
T Consensus 42 sGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~ 121 (343)
T PRK11153 42 AGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARV 121 (343)
T ss_pred CcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 599999999999997654 133322111 0 1135799999999999999999999988766666666667789
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCCh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM 150 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~ 150 (566)
.++++.+||+...++++.+||||||||++||+||+.+|++|||||||++||+.++.+++++|++++++ |+|||++||++
T Consensus 122 ~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~ 201 (343)
T PRK11153 122 TELLELVGLSDKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEM 201 (343)
T ss_pred HHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH
Confidence 99999999998889999999999999999999999999999999999999999999999999999665 99999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+++.++||||++|++|+++..|+++++..
T Consensus 202 ~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 202 DVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999888753
No 416
>TIGR01187 potA spermidine/putrescine ABC transporter ATP-binding subunit. This model describes spermidine/putrescine ABC transporter, ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Polyamines like spermidine and putrescine play vital role in cell proliferation, differentiation, and ion homeostasis. The concentration of polyamines within the cell are regulated by biosynthesis, degradation and transport (uptake and efflux included).
Probab=100.00 E-value=1.6e-33 Score=291.17 Aligned_cols=179 Identities=25% Similarity=0.378 Sum_probs=155.7
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+|+|++.+.+ .+.+..... ....+.|||++|++.+++.+||.||+.|.....+.+..+..+++.++++
T Consensus 7 sGKSTLl~~iaGl~~p~~G~I~i~g~~i~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~ 86 (325)
T TIGR01187 7 CGKTTLLRLLAGFEQPDSGSIMLDGEDVTNVPPHLRHINMVFQSYALFPHMTVEENVAFGLKMRKVPRAEIKPRVLEALR 86 (325)
T ss_pred CCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEecCccccCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHH
Confidence 599999999999997654 123322111 1123569999999999999999999998866555555566778999999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+||+...++++.+||||||||++||+||+.+|++|||||||++||+.+++++++.|+++.++ |.|||++||+++++..
T Consensus 87 ~~~l~~~~~~~~~~LSgGq~qRvalaraL~~~p~lllLDEP~s~LD~~~~~~l~~~l~~l~~~~g~tiiivTHd~~e~~~ 166 (325)
T TIGR01187 87 LVQLEEFADRKPHQLSGGQQQRVALARALVFKPKILLLDEPLSALDKKLRDQMQLELKTIQEQLGITFVFVTHDQEEAMT 166 (325)
T ss_pred HcCCcchhcCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 999998899999999999999999999999999999999999999999999999999998665 9999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+||||++|++|+++..|+++++..
T Consensus 167 ~~d~i~vl~~G~i~~~g~~~~~~~ 190 (325)
T TIGR01187 167 MSDRIAIMRKGKIAQIGTPEEIYE 190 (325)
T ss_pred hCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999998764
No 417
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.6e-33 Score=270.29 Aligned_cols=168 Identities=23% Similarity=0.286 Sum_probs=144.8
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc---cc----ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT---ID----KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~---~~----~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
+||||+++++-++..|+.. +.+.+.. .. -+...||||+|+..|.+.+||.||+.+.....+.+.....++
T Consensus 42 SGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~ 121 (226)
T COG1136 42 SGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA 121 (226)
T ss_pred CCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH
Confidence 5999999999999988662 3332111 11 134679999999999999999999999887777665567788
Q ss_pred HHHHHHHcCCCcccc-cccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecC
Q psy7366 71 VNESLNKFALGHYSD-REVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSH 148 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~-~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH 148 (566)
+.++++.+||++..+ +++.+|||||||||+|||||+.+|+++|.||||.+||..+.+.++++++++.++ |+|||+|||
T Consensus 122 ~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTH 201 (226)
T COG1136 122 AEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTH 201 (226)
T ss_pred HHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 999999999997665 899999999999999999999999999999999999999999999999999765 999999999
Q ss_pred ChhHHHhhcCEEEEEeCCEEE
Q psy7366 149 NMEECEALCTKLTIMVNGQFT 169 (566)
Q Consensus 149 ~~~~~~~~~d~i~vl~~G~i~ 169 (566)
|...+. .|||++.|++|++.
T Consensus 202 d~~lA~-~~dr~i~l~dG~~~ 221 (226)
T COG1136 202 DPELAK-YADRVIELKDGKIE 221 (226)
T ss_pred CHHHHH-hCCEEEEEeCCeee
Confidence 986665 79999999999943
No 418
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-33 Score=273.95 Aligned_cols=172 Identities=29% Similarity=0.364 Sum_probs=146.1
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|++.|++.|.. .+.+..... ......|+|+||++.+++.+|+.||+.+.....+.+.....+++.++++
T Consensus 37 sGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 116 (213)
T cd03259 37 CGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLE 116 (213)
T ss_pred CCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHH
Confidence 599999999999986644 122221111 1123469999999999999999999988655444444555677899999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~~ 155 (566)
.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.++.+++++|+++++ .|.|||++||+++++.+
T Consensus 117 ~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~ 196 (213)
T cd03259 117 LVGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALA 196 (213)
T ss_pred HcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHH
Confidence 99999888999999999999999999999999999999999999999999999999999876 49999999999999999
Q ss_pred hcCEEEEEeCCEEEEec
Q psy7366 156 LCTKLTIMVNGQFTCLG 172 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g 172 (566)
+||+|++|++|+++..|
T Consensus 197 ~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 197 LADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCEEEEEECCEEEecC
Confidence 99999999999998654
No 419
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.6e-33 Score=257.04 Aligned_cols=172 Identities=23% Similarity=0.253 Sum_probs=156.5
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCccc------ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTID------KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~------~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+|++...|++. +.+.+...- -.+++||+|+||..|.+..||+||++|..+..|.++.++++++
T Consensus 39 AGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV 118 (223)
T COG2884 39 AGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRV 118 (223)
T ss_pred CCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHH
Confidence 4999999999999988772 233221111 1246799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++|+.+||.+..+..+.+||||||||++||||++.+|+|||-||||.+|||....++.+++.++.+.|.|||++|||.+
T Consensus 119 ~~~L~~VgL~~k~~~lP~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~ 198 (223)
T COG2884 119 SEVLDLVGLKHKARALPSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLE 198 (223)
T ss_pred HHHHHHhccchhhhcCccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEec
Q psy7366 152 ECEALCTKLTIMVNGQFTCLG 172 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g 172 (566)
.+..+--|++.|++|+++.+.
T Consensus 199 lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 199 LVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHhccCcEEEEeCCEEEecc
Confidence 999999999999999998653
No 420
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=294.62 Aligned_cols=179 Identities=21% Similarity=0.296 Sum_probs=155.9
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc---c----cccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID---K----NLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~---~----~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
+||||++|+++|++.|.. .+.+...... . ....|||+||++.+++.+||.||+.+.....+++..+..++
T Consensus 65 sGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~ 144 (400)
T PRK10070 65 SGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREK 144 (400)
T ss_pred chHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHH
Confidence 599999999999997655 1333221110 0 12469999999999999999999998876666666666778
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~ 149 (566)
+.++++.+||+...++++.+||||||||++||+||+.+|++|||||||++||+.+++++++.|+++++ .|+|||++||+
T Consensus 145 ~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd 224 (400)
T PRK10070 145 ALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHD 224 (400)
T ss_pred HHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 99999999999889999999999999999999999999999999999999999999999999999865 58999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
++++..+||+|++|++|+++..|+++++..
T Consensus 225 ~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~ 254 (400)
T PRK10070 225 LDEAMRIGDRIAIMQNGEVVQVGTPDEILN 254 (400)
T ss_pred HHHHHHhCCEEEEEECCEEEecCCHHHHHh
Confidence 999999999999999999999999988754
No 421
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.2e-33 Score=276.74 Aligned_cols=178 Identities=26% Similarity=0.329 Sum_probs=150.7
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc---c-cccceeEEcCCCCCCCCCCHHHHHHHHHHhcCC----------C
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID---K-NLSYIGYCPQFDALNDRLTPREHLEFYSRVRNV----------P 63 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~---~-~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~----------~ 63 (566)
.||||++|++.|++.+.+ .+.+...... . ...+|+|+||++.+++.+||.||+.+....... .
T Consensus 37 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~ 116 (236)
T cd03219 37 AGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARRE 116 (236)
T ss_pred CCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhcccccccccccccc
Confidence 599999999999987544 1222211111 1 124699999999999999999999887543321 1
Q ss_pred hhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Q psy7366 64 SVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCV 143 (566)
Q Consensus 64 ~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tv 143 (566)
..+..+++.++++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.++++++++|++++++|+||
T Consensus 117 ~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~ti 196 (236)
T cd03219 117 EREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITV 196 (236)
T ss_pred HHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEE
Confidence 33456678999999999988899999999999999999999999999999999999999999999999999997789999
Q ss_pred EEecCChhHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 144 ILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 144 iiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
|++||+++++..+||+|++|++|+++..|+++++.
T Consensus 197 i~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (236)
T cd03219 197 LLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVR 231 (236)
T ss_pred EEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhc
Confidence 99999999999999999999999999999888764
No 422
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.3e-33 Score=292.08 Aligned_cols=179 Identities=22% Similarity=0.303 Sum_probs=157.1
Q ss_pred CCcchHHHHHhccccCCC---ccCCC----CCcc---c----ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhh
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGS----NPTI---D----KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVL 66 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~----~~~~---~----~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~ 66 (566)
.||||++|+++|++.|.. .+.+. .... . ....+|+|+||++.+++.+||.||+.++....+.+..+
T Consensus 61 sGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l~p~~Tv~eNi~~~~~~~g~~~~~ 140 (382)
T TIGR03415 61 SGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAE 140 (382)
T ss_pred CcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcCCCCCcHHHHHHHHHHhcCCCHHH
Confidence 599999999999997655 23331 1110 0 01247999999999999999999999987666776667
Q ss_pred HHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEE
Q psy7366 67 LNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVIL 145 (566)
Q Consensus 67 ~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tvii 145 (566)
..+++.++++.+||....++++.+||||||||++||+||+.+|+||||||||++|||.++.++++.|.+++++ |+|||+
T Consensus 141 ~~~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~ 220 (382)
T TIGR03415 141 RRKRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIF 220 (382)
T ss_pred HHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 7788999999999999999999999999999999999999999999999999999999999999999999765 999999
Q ss_pred ecCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 146 TSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 146 isH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
||||++++.++||||++|++|+++..|+++++..
T Consensus 221 iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~ 254 (382)
T TIGR03415 221 VSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVL 254 (382)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 9999999999999999999999999999998754
No 423
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.6e-33 Score=275.12 Aligned_cols=168 Identities=25% Similarity=0.331 Sum_probs=144.1
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc---c---ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI---D---KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~---~---~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+.+ .+.+..... . ...+.|+|+||++.+++.+||.||+.+.....+.+..+..+++
T Consensus 40 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 119 (216)
T TIGR00960 40 AGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERV 119 (216)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHH
Confidence 599999999999987644 122221110 0 1234799999999999999999999987655555555566788
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++++.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|.|||++|||++
T Consensus 120 ~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~ 199 (216)
T TIGR00960 120 SAALEKVGLEGKAHALPMQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN 199 (216)
T ss_pred HHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 99999999998889999999999999999999999999999999999999999999999999999777999999999999
Q ss_pred HHHhhcCEEEEEeCCEE
Q psy7366 152 ECEALCTKLTIMVNGQF 168 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i 168 (566)
++..+||+|++|++|++
T Consensus 200 ~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 200 LVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhCCEEEEEeCCcC
Confidence 99999999999999974
No 424
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-33 Score=273.80 Aligned_cols=172 Identities=25% Similarity=0.313 Sum_probs=147.4
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNK 77 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 77 (566)
.||||++|+++|++.+.+ .+.+.... .....|+|+||++.+++.+|+.||+.+.....+.+.....+++.++++.
T Consensus 41 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 118 (220)
T cd03293 41 CGKSTLLRIIAGLERPTSGEVLVDGEPVT--GPGPDRGYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLEL 118 (220)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEECc--cccCcEEEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 599999999999986644 12222111 2235699999999998889999999887655555555556788999999
Q ss_pred cCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHHhh
Q psy7366 78 FALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEAL 156 (566)
Q Consensus 78 ~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~~~ 156 (566)
+|+....++++.+||||||||++||+||+.+|++|||||||++||+.++++++++|+++.+ .|+|||++||+++++.++
T Consensus 119 ~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~ 198 (220)
T cd03293 119 VGLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFL 198 (220)
T ss_pred cCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHh
Confidence 9999888999999999999999999999999999999999999999999999999999855 589999999999999999
Q ss_pred cCEEEEEe--CCEEEEecCh
Q psy7366 157 CTKLTIMV--NGQFTCLGSA 174 (566)
Q Consensus 157 ~d~i~vl~--~G~i~~~g~~ 174 (566)
||++++|+ +|+++..+++
T Consensus 199 ~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 199 ADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEEEECCCCEEEEEEEe
Confidence 99999999 7999987654
No 425
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.2e-33 Score=273.41 Aligned_cols=172 Identities=30% Similarity=0.521 Sum_probs=148.4
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|++.|++.+.+ .+.+..... ......|||+||++.+++.+||.||+.+....++.+..+..+++.+++
T Consensus 42 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 121 (218)
T cd03266 42 AGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELA 121 (218)
T ss_pred CCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 599999999999987654 122221111 122357999999999999999999998876655555556677889999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|.|||++||+++++..
T Consensus 122 ~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~ 201 (218)
T cd03266 122 DRLGMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVER 201 (218)
T ss_pred HHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 99999988899999999999999999999999999999999999999999999999999997779999999999999999
Q ss_pred hcCEEEEEeCCEEEEec
Q psy7366 156 LCTKLTIMVNGQFTCLG 172 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g 172 (566)
+||||++|++|+++..|
T Consensus 202 ~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 202 LCDRVVVLHRGRVVYEG 218 (218)
T ss_pred hcCEEEEEECCEEeecC
Confidence 99999999999998643
No 426
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-33 Score=283.58 Aligned_cols=179 Identities=25% Similarity=0.353 Sum_probs=153.1
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc-----cccccceeEEcCCCC-CCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI-----DKNLSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~-----~~~~~~ig~v~Q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+.+. +.+..... ......||||||+|. .+...||+||+.|.....+.+..+..+++
T Consensus 44 aGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 123 (287)
T PRK13637 44 SGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRV 123 (287)
T ss_pred CcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHH
Confidence 5999999999999876551 33322111 122357999999984 23457999999987766667777777889
Q ss_pred HHHHHHcCCC--cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecC
Q psy7366 72 NESLNKFALG--HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSH 148 (566)
Q Consensus 72 ~~~l~~~gl~--~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH 148 (566)
.++++.+||. ...++++.+||||||||++||+||+.+|++|||||||++||+.++.+++++|++++++ |.|||++||
T Consensus 124 ~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtH 203 (287)
T PRK13637 124 KRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSH 203 (287)
T ss_pred HHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 9999999997 5689999999999999999999999999999999999999999999999999999765 999999999
Q ss_pred ChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 149 NMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 149 ~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+++++..+||||++|++|++++.|+++++..
T Consensus 204 d~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 204 SMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred CHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999988753
No 427
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-33 Score=274.76 Aligned_cols=178 Identities=26% Similarity=0.347 Sum_probs=152.4
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCccc------ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTID------KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~------~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+... +.+...... .....|+|+||++.+++.+|+.||+.+.....+.......+++
T Consensus 42 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~ 121 (233)
T cd03258 42 AGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERV 121 (233)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5999999999999976541 222211110 1135799999999999999999999886554455444556778
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCCh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM 150 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~ 150 (566)
.++++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++ |+|||++||++
T Consensus 122 ~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~ 201 (233)
T cd03258 122 LELLELVGLEDKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEM 201 (233)
T ss_pred HHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 99999999998889999999999999999999999999999999999999999999999999998765 89999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
+++.++||++++|++|+++..|+++++.
T Consensus 202 ~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 202 EVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999887764
No 428
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-33 Score=275.91 Aligned_cols=178 Identities=25% Similarity=0.350 Sum_probs=150.2
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCC----ChhhHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNV----PSVLLNTIVN 72 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~----~~~~~~~~~~ 72 (566)
.||||++|+++|++.+.. .+.+..... ......|+|++|++.+++.+||.||+.+.....+. +..+..+++.
T Consensus 39 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~ 118 (239)
T cd03296 39 SGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVH 118 (239)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHH
Confidence 599999999999986644 122221110 11235699999999999899999999886544332 3334456788
Q ss_pred HHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChh
Q psy7366 73 ESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNME 151 (566)
Q Consensus 73 ~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~ 151 (566)
++++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++ |+|||++||+++
T Consensus 119 ~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~ 198 (239)
T cd03296 119 ELLKLVQLDWLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE 198 (239)
T ss_pred HHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 9999999998889999999999999999999999999999999999999999999999999999765 899999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
++..+||||++|++|+++..|+++++.
T Consensus 199 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (239)
T cd03296 199 EALEVADRVVVMNKGRIEQVGTPDEVY 225 (239)
T ss_pred HHHHhCCEEEEEECCeEEEecCHHHHh
Confidence 999999999999999999999888764
No 429
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-33 Score=272.02 Aligned_cols=175 Identities=23% Similarity=0.340 Sum_probs=153.7
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCC-------cccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNP-------TIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~-------~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
+||||++|+|.|++.|++. +.+... .....+++|||||||..||+.+||+-|+.|+.... ....
T Consensus 35 sGKTslin~IaGL~rPdeG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~tVrgNL~YG~~~~------~~~~ 108 (352)
T COG4148 35 SGKTSLINMIAGLTRPDEGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYTVRGNLRYGMWKS------MRAQ 108 (352)
T ss_pred CChhhHHHHHhccCCccccEEEECCEEeecccCCcccChhhheeeeEeeccccccceEEecchhhhhccc------chHh
Confidence 5999999999999999882 222111 11123568999999999999999999999876433 3445
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
..++.+.+|++++++|++.+|||||||||+|+|||+..|++|+||||.++||...++++.-+|.+|.++ ..-|+++||-
T Consensus 109 fd~iv~lLGI~hLL~R~P~~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlYVSHS 188 (352)
T COG4148 109 FDQLVALLGIEHLLDRYPGTLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILYVSHS 188 (352)
T ss_pred HHHHHHHhCcHHHHhhCCCccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEEEecC
Confidence 678889999999999999999999999999999999999999999999999999999999999999776 7889999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHhhc
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKSKS 181 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~~ 181 (566)
++|+.++||+|++|++|++...|..+++....
T Consensus 189 ~~Ev~RLAd~vV~le~GkV~A~g~~e~v~~~~ 220 (352)
T COG4148 189 LDEVLRLADRVVVLENGKVKASGPLEEVWGSP 220 (352)
T ss_pred HHHHHhhhheEEEecCCeEEecCcHHHHhcCc
Confidence 99999999999999999999999999986653
No 430
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.8e-33 Score=273.68 Aligned_cols=178 Identities=28% Similarity=0.399 Sum_probs=152.0
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc---cc-cccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI---DK-NLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNE 73 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~---~~-~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 73 (566)
.||||++|+++|++.+... +.+..... .. ....++|+||++.+++.+||.||+.+.....+....+..+++.+
T Consensus 37 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~ 116 (232)
T cd03218 37 AGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEE 116 (232)
T ss_pred CCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 5999999999999876541 22221111 11 12469999999999999999999988655444444455677889
Q ss_pred HHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHH
Q psy7366 74 SLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEEC 153 (566)
Q Consensus 74 ~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~ 153 (566)
+++.+|++...++.+.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|.|||++||+++++
T Consensus 117 ~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~ 196 (232)
T cd03218 117 LLEEFHITHLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRET 196 (232)
T ss_pred HHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 99999999888999999999999999999999999999999999999999999999999999877799999999999999
Q ss_pred HhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 154 EALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 154 ~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
.++||+|++|++|+++..|+.+++.
T Consensus 197 ~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 197 LSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred HHhCCEEEEEECCeEEEEeCHHHhh
Confidence 9999999999999999998887653
No 431
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-33 Score=283.06 Aligned_cols=178 Identities=25% Similarity=0.349 Sum_probs=153.6
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc-------ccccccceeEEcCCC--CCCCCCCHHHHHHHHHHhcCCChhhHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT-------IDKNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLN 68 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~-------~~~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~ 68 (566)
.||||++|+++|++.+... +.+.... .......||||+|+| .++. .||.||+.|.....+.+..+..
T Consensus 43 sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~~~~~~~~~ 121 (288)
T PRK13643 43 SGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNFGIPKEKAE 121 (288)
T ss_pred ChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHcCCCHHHHH
Confidence 5999999999999977652 3332211 012245799999998 4554 6999999998776677777778
Q ss_pred HHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEec
Q psy7366 69 TIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTS 147 (566)
Q Consensus 69 ~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiis 147 (566)
+++.++++.+||. ...++++.+||||||||++||+||+.+|++|||||||++||+.++..+.++|++++++|.|||++|
T Consensus 122 ~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vt 201 (288)
T PRK13643 122 KIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVT 201 (288)
T ss_pred HHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 8899999999996 467999999999999999999999999999999999999999999999999999987799999999
Q ss_pred CChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 148 HNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 148 H~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
||++++.++||||++|++|+++..|+++++..
T Consensus 202 Hd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 202 HLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 99999999999999999999999999988753
No 432
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-33 Score=279.16 Aligned_cols=179 Identities=23% Similarity=0.330 Sum_probs=152.7
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc---cc----cccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI---DK----NLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~---~~----~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.+.. .+.+..... .. ...+|||+||++.+++.+||.||+.+.....+.+.....++
T Consensus 61 sGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~ 140 (269)
T cd03294 61 SGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREER 140 (269)
T ss_pred CCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHH
Confidence 599999999999997644 133321111 01 12469999999999999999999988765444545555677
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++++.+||+...++.+.+||||||||++||+||+.+|++|||||||++||+.+++++.++|+++.++ |+|||++||+
T Consensus 141 ~~~~l~~~~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~ 220 (269)
T cd03294 141 AAEALELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHD 220 (269)
T ss_pred HHHHHHHcCCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 899999999998889999999999999999999999999999999999999999999999999998654 8999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
++++.++||+|++|++|+++..|+++++..
T Consensus 221 ~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 221 LDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred HHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999888753
No 433
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.1e-33 Score=254.23 Aligned_cols=178 Identities=20% Similarity=0.302 Sum_probs=153.6
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhc-CCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR-NVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~~~l 75 (566)
.||||++++|.|...|.+ .+.+.+... ....+-|++++|+..+|.-+||.+|+.++..-. .+ ..+.+++++.++
T Consensus 36 aGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~LkL-~a~~r~~v~~aa 114 (231)
T COG3840 36 AGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGLGLSPGLKL-NAEQREKVEAAA 114 (231)
T ss_pred ccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcccCCccccc-CHHHHHHHHHHH
Confidence 499999999999998877 233332221 123345999999999999999999998764221 12 234567899999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHH
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECE 154 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~ 154 (566)
..+||....+|.+.+|||||||||+|||+|+++-+||+||||+++|||.-|.++..++.++.++ +.|+++|||.++++.
T Consensus 115 ~~vGl~~~~~RLP~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~ 194 (231)
T COG3840 115 AQVGLAGFLKRLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAA 194 (231)
T ss_pred HHhChhhHhhhCccccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999654 899999999999999
Q ss_pred hhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 155 ALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 155 ~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
.++||++++++|+|.+.|+.+++..
T Consensus 195 ~ia~~~~fl~~Gri~~~g~~~~~~~ 219 (231)
T COG3840 195 RIADRVVFLDNGRIAAQGSTQELLS 219 (231)
T ss_pred HhhhceEEEeCCEEEeeccHHHHhc
Confidence 9999999999999999999988764
No 434
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-33 Score=269.18 Aligned_cols=171 Identities=27% Similarity=0.487 Sum_probs=147.8
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNK 77 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 77 (566)
.||||++|+++|++.+.. .+.+.... ......++|++|++.+++.+|+.||+.+....++.+..+..+++.++++.
T Consensus 37 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~-~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 115 (210)
T cd03269 37 AGKTTTIRMILGIILPDSGEVLFDGKPLD-IAARNRIGYLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLER 115 (210)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCCchh-HHHHccEEEeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 599999999999986654 12232211 12235799999999999999999999887655555555667788999999
Q ss_pred cCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhhc
Q psy7366 78 FALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALC 157 (566)
Q Consensus 78 ~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~~ 157 (566)
+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|+|||++||+++++.++|
T Consensus 116 ~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~ 195 (210)
T cd03269 116 LELSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELC 195 (210)
T ss_pred cCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhh
Confidence 99998889999999999999999999999999999999999999999999999999998777999999999999999999
Q ss_pred CEEEEEeCCEEEEec
Q psy7366 158 TKLTIMVNGQFTCLG 172 (566)
Q Consensus 158 d~i~vl~~G~i~~~g 172 (566)
|++++|++|+++..|
T Consensus 196 d~i~~l~~g~i~~~~ 210 (210)
T cd03269 196 DRVLLLNKGRAVLYG 210 (210)
T ss_pred hEEEEEeCCEEEecC
Confidence 999999999998643
No 435
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-33 Score=282.68 Aligned_cols=178 Identities=24% Similarity=0.301 Sum_probs=152.3
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCc-------ccccccceeEEcCCC--CCCCCCCHHHHHHHHHHhcCCChhhHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPT-------IDKNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLN 68 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~-------~~~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~ 68 (566)
.||||++|+++|++.++. .+.+.... .......||||||+| .++ ..||.||+.|.....+.+..+..
T Consensus 44 sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~ 122 (290)
T PRK13634 44 SGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAK 122 (290)
T ss_pred CcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHH
Confidence 499999999999998765 23332211 012235799999998 344 57999999988766666777777
Q ss_pred HHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEe
Q psy7366 69 TIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILT 146 (566)
Q Consensus 69 ~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviii 146 (566)
+++.++++.+||. ...++++.+||||||||++||+||+.+|++|||||||++||+.++.++.++|++++++ |.|||++
T Consensus 123 ~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviii 202 (290)
T PRK13634 123 QKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLV 202 (290)
T ss_pred HHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 8899999999997 5679999999999999999999999999999999999999999999999999999664 9999999
Q ss_pred cCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 147 SHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 147 sH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
|||++++..+||||++|++|++++.|+++++..
T Consensus 203 tHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 203 THSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred eCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999888653
No 436
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1e-32 Score=285.18 Aligned_cols=180 Identities=22% Similarity=0.255 Sum_probs=153.4
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc------ccccceeEEcCCC--CCCCCCCHHHHHHHHHHhc--CCChhhH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID------KNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVR--NVPSVLL 67 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~------~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~--~~~~~~~ 67 (566)
.||||++|+|+|++.+.. .+.+...... .....|+||+|+| .+++.+||.||+.+..... +++..+.
T Consensus 58 sGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~ 137 (331)
T PRK15079 58 CGKSTFARAIIGLVKATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEV 137 (331)
T ss_pred CCHHHHHHHHHCCCCCCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHH
Confidence 599999999999987644 1223221110 1234799999998 5788999999998865443 3566677
Q ss_pred HHHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEE
Q psy7366 68 NTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVIL 145 (566)
Q Consensus 68 ~~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tvii 145 (566)
.+++.++++.+|+. ...++++.+|||||+||++||+||+.+|++||+||||++||+.++.++.++|++++++ |.|||+
T Consensus 138 ~~~~~~~l~~vgl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~ 217 (331)
T PRK15079 138 KDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIF 217 (331)
T ss_pred HHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 78899999999995 4679999999999999999999999999999999999999999999999999999765 999999
Q ss_pred ecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 146 TSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 146 isH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
||||++++.++||||++|++|++++.|+++++...
T Consensus 218 iTHdl~~~~~~~dri~vl~~G~ive~g~~~~i~~~ 252 (331)
T PRK15079 218 IAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHN 252 (331)
T ss_pred EeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 99999999999999999999999999999887653
No 437
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.3e-33 Score=269.48 Aligned_cols=172 Identities=25% Similarity=0.375 Sum_probs=146.9
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+++|++.+.. .+.+..... ......|+|+||++.+++..|+.||+.+.....+....+..+++.++++
T Consensus 37 sGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 116 (213)
T cd03301 37 CGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAE 116 (213)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 599999999999986544 122221111 1123469999999999989999999988755555555566678899999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++ |.|||++||+++++.+
T Consensus 117 ~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~ 196 (213)
T cd03301 117 LLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMT 196 (213)
T ss_pred HcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 999998889999999999999999999999999999999999999999999999999998764 8999999999999999
Q ss_pred hcCEEEEEeCCEEEEec
Q psy7366 156 LCTKLTIMVNGQFTCLG 172 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g 172 (566)
+||+|++|++|++++.|
T Consensus 197 ~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 197 MADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCeEEEEECCEEEecC
Confidence 99999999999998764
No 438
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-33 Score=264.63 Aligned_cols=179 Identities=21% Similarity=0.249 Sum_probs=154.1
Q ss_pred CCcchHHHHHhccccCCC-ccCCCC--Cccc------ccccceeEEcCCCCCCCCCCHHHHHHHH--------HHhcCCC
Q psy7366 1 MGLTTTPKRVVTLLLTTQ-KVPGSN--PTID------KNLSYIGYCPQFDALNDRLTPREHLEFY--------SRVRNVP 63 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~-~~~~~~--~~~~------~~~~~ig~v~Q~~~l~~~~tv~e~l~~~--------~~~~~~~ 63 (566)
.||||++|++++++-++. .+...+ .... ..+..|||++|.+.|.+.+||.+|+..+ ....++.
T Consensus 41 aGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglf 120 (258)
T COG3638 41 AGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLF 120 (258)
T ss_pred CcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCC
Confidence 599999999999776655 122211 1111 1245799999999999999999999754 2334566
Q ss_pred hhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCE
Q psy7366 64 SVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRC 142 (566)
Q Consensus 64 ~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~t 142 (566)
..+-+.++-+.|+++|+.+...++.++|||||+|||+|||||+.+|+++|-|||+++|||.+.+.+.+.|+++.+ .|.|
T Consensus 121 sk~dk~~Al~aLervgi~~~A~qra~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~T 200 (258)
T COG3638 121 SKEDKAQALDALERVGILDKAYQRASTLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGIT 200 (258)
T ss_pred CHHHHHHHHHHHHHcCcHHHHHHHhccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCE
Confidence 667778899999999999999999999999999999999999999999999999999999999999999999965 5999
Q ss_pred EEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 143 VILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 143 viiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
||+.-|+++.+.++||||+-|++|+|+++|+++++.+
T Consensus 201 vi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 201 VIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred EEEEechHHHHHHHHhhheEecCCcEEEeCChhhhhH
Confidence 9999999999999999999999999999999988643
No 439
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-33 Score=279.06 Aligned_cols=177 Identities=21% Similarity=0.283 Sum_probs=151.3
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc---cccccceeEEcCCCC-CCCCCCHHHHHHHHHHhcCCChhhHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI---DKNLSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNE 73 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~---~~~~~~ig~v~Q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 73 (566)
.||||++|+++|++.|.+ .+.+..... ......|||+||+|. .+...||.||+.|+....+.+.....+++.+
T Consensus 42 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 121 (274)
T PRK13647 42 AGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEE 121 (274)
T ss_pred CcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHH
Confidence 599999999999987655 233322111 112356999999984 4456899999998765555666666778999
Q ss_pred HHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHH
Q psy7366 74 SLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEEC 153 (566)
Q Consensus 74 ~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~ 153 (566)
+++.+||....++++.+||||||||++||+||+.+|++|||||||++||+.++.++.++|++++++|.|||++||+++++
T Consensus 122 ~l~~~~L~~~~~~~~~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~ 201 (274)
T PRK13647 122 ALKAVRMWDFRDKPPYHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLA 201 (274)
T ss_pred HHHHCCCHHHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 99999999888999999999999999999999999999999999999999999999999999977799999999999999
Q ss_pred HhhcCEEEEEeCCEEEEecChhHH
Q psy7366 154 EALCTKLTIMVNGQFTCLGSATHL 177 (566)
Q Consensus 154 ~~~~d~i~vl~~G~i~~~g~~~~~ 177 (566)
.++||||++|++|++++.|+++++
T Consensus 202 ~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 202 AEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999998764
No 440
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-32 Score=268.09 Aligned_cols=171 Identities=30% Similarity=0.535 Sum_probs=146.2
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.+.+ .+.+..... ......++|++|++.+++.+||.||+.+.....+.+..+..+++.+++
T Consensus 36 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l 115 (211)
T cd03264 36 AGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVL 115 (211)
T ss_pred CCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 599999999999987654 122222111 122357999999999999999999998876555555555667889999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|+++++ +.|||++||+++++.+
T Consensus 116 ~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~~~~~ 194 (211)
T cd03264 116 ELVNLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVEDVES 194 (211)
T ss_pred HHCCCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHHHHHH
Confidence 999998888999999999999999999999999999999999999999999999999999865 5899999999999999
Q ss_pred hcCEEEEEeCCEEEEec
Q psy7366 156 LCTKLTIMVNGQFTCLG 172 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g 172 (566)
+|||+++|++|+++..|
T Consensus 195 ~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 195 LCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hCCEEEEEECCEEEecC
Confidence 99999999999998654
No 441
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-32 Score=272.23 Aligned_cols=178 Identities=28% Similarity=0.435 Sum_probs=151.8
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc---cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI---DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNES 74 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~---~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~ 74 (566)
.||||++|++.|++.+... +.+..... ......++|+||++.+++.+||.||+.+.....+.+..+..+++.++
T Consensus 38 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~ 117 (242)
T cd03295 38 SGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADEL 117 (242)
T ss_pred CCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5999999999999876541 22221110 11234799999999999999999999887655455545566788999
Q ss_pred HHHcCCCc--ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChh
Q psy7366 75 LNKFALGH--YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNME 151 (566)
Q Consensus 75 l~~~gl~~--~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~ 151 (566)
++.+|+.. ..++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++ |+|||++||+++
T Consensus 118 l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~ 197 (242)
T cd03295 118 LALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID 197 (242)
T ss_pred HHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH
Confidence 99999986 789999999999999999999999999999999999999999999999999998765 899999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
++.++||+|++|++|+++..|+++++.
T Consensus 198 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 198 EAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999887764
No 442
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.6e-33 Score=270.73 Aligned_cols=167 Identities=23% Similarity=0.305 Sum_probs=142.1
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcccc-------cccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTIDK-------NLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~~-------~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.+.+. +.+....... ....|+|++|++.+++.+||+||+.+.....+.+.....++
T Consensus 41 sGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~ 120 (218)
T cd03255 41 SGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRER 120 (218)
T ss_pred CCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHH
Confidence 5999999999999876541 2222211100 12469999999999999999999998765555544455678
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~ 149 (566)
+.++++.+|++...++.+.+||||||||++||+||+.+|++|||||||++||+.+++++.++|+++++ .|+|||++||+
T Consensus 121 ~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~ 200 (218)
T cd03255 121 AEELLERVGLGDRLNHYPSELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHD 200 (218)
T ss_pred HHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 89999999999888999999999999999999999999999999999999999999999999999976 59999999999
Q ss_pred hhHHHhhcCEEEEEeCCEE
Q psy7366 150 MEECEALCTKLTIMVNGQF 168 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i 168 (566)
++++. +||+|++|++|++
T Consensus 201 ~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 201 PELAE-YADRIIELRDGKI 218 (218)
T ss_pred HHHHh-hhcEEEEeeCCcC
Confidence 99997 9999999999974
No 443
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-32 Score=279.91 Aligned_cols=178 Identities=23% Similarity=0.308 Sum_probs=151.7
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-------cccccceeEEcCCCC--CCCCCCHHHHHHHHHHhcCCChhhHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-------DKNLSYIGYCPQFDA--LNDRLTPREHLEFYSRVRNVPSVLLN 68 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-------~~~~~~ig~v~Q~~~--l~~~~tv~e~l~~~~~~~~~~~~~~~ 68 (566)
.||||++|+|+|++.|.+ .+.+..... ......|||+||+|. ++ .+||.||+.+.....+....+..
T Consensus 44 aGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~ 122 (287)
T PRK13641 44 SGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAK 122 (287)
T ss_pred CCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHH
Confidence 599999999999998765 233322110 112347999999983 44 57999999886655555556667
Q ss_pred HHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEec
Q psy7366 69 TIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTS 147 (566)
Q Consensus 69 ~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiis 147 (566)
+++.++++.+||+ ...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|+++++.|.|||++|
T Consensus 123 ~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivs 202 (287)
T PRK13641 123 EKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVT 202 (287)
T ss_pred HHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 7899999999997 678999999999999999999999999999999999999999999999999999977799999999
Q ss_pred CChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 148 HNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 148 H~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
|+++++.++||||++|++|+++..|+++++..
T Consensus 203 H~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 203 HNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999887653
No 444
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.4e-32 Score=269.33 Aligned_cols=176 Identities=45% Similarity=0.769 Sum_probs=150.9
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.+... +.+..... ......+||++|++.+++.+|+.||+.+.....+.+..+..+++.+++
T Consensus 39 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l 118 (220)
T cd03263 39 AGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLL 118 (220)
T ss_pred CCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 5999999999999876541 22222111 122356999999999998999999999876665555555667889999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHh
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEA 155 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~ 155 (566)
+.+||....++++.+||+|||||++||+||+.+|++|||||||++||+.+++++.++|+++++ +.|||++||+++++.+
T Consensus 119 ~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~ 197 (220)
T cd03263 119 RVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMDEAEA 197 (220)
T ss_pred HHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHH
Confidence 999998888999999999999999999999999999999999999999999999999999865 6999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHH
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHL 177 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~ 177 (566)
+||+|++|++|+++..|+++++
T Consensus 198 ~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 198 LCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999998887653
No 445
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-32 Score=273.18 Aligned_cols=178 Identities=22% Similarity=0.269 Sum_probs=148.4
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc------cccccceeEEcCCCCCCCCCCHHHHHHHHHHh--------cCCC
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI------DKNLSYIGYCPQFDALNDRLTPREHLEFYSRV--------RNVP 63 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~------~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~--------~~~~ 63 (566)
.||||++|+++|++.+.+ .+.+..... ......|+|+||++.+++.+||.||+.+.... .+..
T Consensus 38 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~ 117 (241)
T cd03256 38 AGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLF 117 (241)
T ss_pred CCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccC
Confidence 599999999999986544 122322111 11235699999999999999999999865321 1122
Q ss_pred hhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCE
Q psy7366 64 SVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRC 142 (566)
Q Consensus 64 ~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~t 142 (566)
.....+++.++++.+|+....++++.+||||||||++||+||+.+|+||||||||++||+.+++.+.++|++++++ |+|
T Consensus 118 ~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~t 197 (241)
T cd03256 118 PKEEKQRALAALERVGLLDKAYQRADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGIT 197 (241)
T ss_pred cHHHHHHHHHHHHHcCChhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCE
Confidence 2334567889999999988889999999999999999999999999999999999999999999999999998764 999
Q ss_pred EEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 143 VILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 143 viiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
||++||+++++..+||+|++|++|+++..|+++++.
T Consensus 198 ii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 198 VIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred EEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 999999999999999999999999999999888763
No 446
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.7e-32 Score=272.23 Aligned_cols=178 Identities=25% Similarity=0.282 Sum_probs=151.8
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-----cccccceeEEcCCCCCCCCCCHHHHHHHHHH-hcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-----DKNLSYIGYCPQFDALNDRLTPREHLEFYSR-VRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~-~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+.+ .+.+..... ....++++|++|++.+++.+||.||+.+... ..+.+..+..+++
T Consensus 38 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~ 117 (240)
T PRK09493 38 SGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQA 117 (240)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHH
Confidence 599999999999987554 122221111 1123579999999999999999999987542 2344455566788
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|+|||++||+++
T Consensus 118 ~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~ 197 (240)
T PRK09493 118 RELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG 197 (240)
T ss_pred HHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 99999999988889999999999999999999999999999999999999999999999999999777999999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
++..+||||++|++|++++.|+++++.
T Consensus 198 ~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 198 FAEKVASRLIFIDKGRIAEDGDPQVLI 224 (240)
T ss_pred HHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 999999999999999999999888764
No 447
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-32 Score=289.89 Aligned_cols=178 Identities=21% Similarity=0.369 Sum_probs=152.0
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc---cccccceeEEcCCCCCCCCCCHHHHHHHHHHhc--CCC--hhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI---DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR--NVP--SVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~---~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~--~~~--~~~~~~~ 70 (566)
.||||++|+++|++.+.+ .+.+..... ....++||||+|++.+++.+||.||+.++...+ .+. .....++
T Consensus 40 aGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~ 119 (402)
T PRK09536 40 AGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAA 119 (402)
T ss_pred chHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHH
Confidence 599999999999987655 233322111 122457999999999999999999998764321 111 2344578
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCCh
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNM 150 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~ 150 (566)
++++++.+|+....++++.+||||||||++||+||+++|++|||||||++||+.++.+++++|++++++|+|||++||++
T Consensus 120 v~~~le~vgl~~~~~~~~~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl 199 (402)
T PRK09536 120 VERAMERTGVAQFADRPVTSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDL 199 (402)
T ss_pred HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCH
Confidence 89999999999999999999999999999999999999999999999999999999999999999987799999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
+++.++|||+++|++|+++..|+++++.
T Consensus 200 ~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 200 DLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999998864
No 448
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-33 Score=264.32 Aligned_cols=179 Identities=24% Similarity=0.323 Sum_probs=156.5
Q ss_pred CCcchHHHHHhccccCCC--------ccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhc-------CC---
Q psy7366 1 MGLTTTPKRVVTLLLTTQ--------KVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR-------NV--- 62 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~--------~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~-------~~--- 62 (566)
.||||++++|+|.+.|+. .+++.++. ...+.+|+--||.+.+|++|||.||+..+...+ +.
T Consensus 41 AGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~-~iar~Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~ 119 (250)
T COG0411 41 AGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPH-RIARLGIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRA 119 (250)
T ss_pred CCceeeeeeecccccCCCceEEECCcccCCCCHH-HHHhccceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccc
Confidence 499999999999998876 23332222 123567999999999999999999998764422 11
Q ss_pred --ChhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-
Q psy7366 63 --PSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE- 139 (566)
Q Consensus 63 --~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~- 139 (566)
...+..+++.++|+.+||.+..+++.++||+|||+|++||+||+.+|++|+||||.+||.|...+++.++|+++++.
T Consensus 120 ~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~ 199 (250)
T COG0411 120 RKEEREARERARELLEFVGLGELADRPAGNLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRG 199 (250)
T ss_pred hhhHHHHHHHHHHHHHHcCCchhhcchhhcCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcC
Confidence 24567789999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 140 GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 140 g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
|.||++|+|||+.+..+||||+||+.|+++++|+|+++..+
T Consensus 200 g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~~d 240 (250)
T COG0411 200 GVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVRNN 240 (250)
T ss_pred CcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHhcC
Confidence 79999999999999999999999999999999999998654
No 449
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.5e-32 Score=272.79 Aligned_cols=178 Identities=25% Similarity=0.258 Sum_probs=150.6
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc-----------ccccccceeEEcCCCCCCCCCCHHHHHHHHHH-hcCCChh
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT-----------IDKNLSYIGYCPQFDALNDRLTPREHLEFYSR-VRNVPSV 65 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~-----------~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~-~~~~~~~ 65 (566)
.||||++|++.|++.+... +.+.... .......++|+||++.+++.+|+.||+.++.. ..+.+..
T Consensus 40 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~ 119 (250)
T PRK11264 40 SGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKE 119 (250)
T ss_pred CCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHH
Confidence 5999999999999865431 2221110 01123479999999999999999999987543 2334444
Q ss_pred hHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q psy7366 66 LLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVIL 145 (566)
Q Consensus 66 ~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii 145 (566)
...+++.++++.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|.|||+
T Consensus 120 ~~~~~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~ 199 (250)
T PRK11264 120 EATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVI 199 (250)
T ss_pred HHHHHHHHHHHHcCCcchhhCChhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEE
Confidence 55677889999999998889999999999999999999999999999999999999999999999999999777999999
Q ss_pred ecCChhHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 146 TSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 146 isH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
+||+++++.++||||++|++|+++..|+++++.
T Consensus 200 ~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 200 VTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999988764
No 450
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-32 Score=278.02 Aligned_cols=178 Identities=28% Similarity=0.324 Sum_probs=153.0
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc---cccccceeEEcCCCC-CCCCCCHHHHHHHHHHhcCCChhhHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI---DKNLSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNE 73 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~---~~~~~~ig~v~Q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 73 (566)
.||||++|+++|++.|.+. +.+..... ....+.|||++|+|. +++.+||.||+.|.....+.+..+..+++.+
T Consensus 44 sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~ 123 (279)
T PRK13650 44 SGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNE 123 (279)
T ss_pred CCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHH
Confidence 5999999999999876652 22221111 122357999999984 6677899999998766566667677788999
Q ss_pred HHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhH
Q psy7366 74 SLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEE 152 (566)
Q Consensus 74 ~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~ 152 (566)
+++.+||+...++.+.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++ |+|||++||++++
T Consensus 124 ~l~~~gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~ 203 (279)
T PRK13650 124 ALELVGMQDFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE 203 (279)
T ss_pred HHHHCCCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH
Confidence 999999998889999999999999999999999999999999999999999999999999999765 9999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 153 CEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 153 ~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+. .||||++|++|+++..|+++++..
T Consensus 204 ~~-~~dri~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13650 204 VA-LSDRVLVMKNGQVESTSTPRELFS 229 (279)
T ss_pred HH-hCCEEEEEECCEEEEECCHHHHHc
Confidence 95 799999999999999999988754
No 451
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-32 Score=272.27 Aligned_cols=180 Identities=20% Similarity=0.257 Sum_probs=153.2
Q ss_pred CCcchHHHHHhcccc-C-CCccC------CCCC---ccc----ccccceeEEcCCC--CCCCCCCHHHHHHHHHHhc-CC
Q psy7366 1 MGLTTTPKRVVTLLL-T-TQKVP------GSNP---TID----KNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVR-NV 62 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~-~-~~~~~------~~~~---~~~----~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~-~~ 62 (566)
+|||||.++|++++- + +.... +.+. ..+ -+.+.|+|+||+| .|.|-+||.+.+.-..... +.
T Consensus 42 sGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~ 121 (316)
T COG0444 42 SGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKG 121 (316)
T ss_pred CCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcc
Confidence 599999999999996 3 33222 2111 111 1345799999998 6778899999997665543 33
Q ss_pred -ChhhHHHHHHHHHHHcCCCc---ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh
Q psy7366 63 -PSVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS 138 (566)
Q Consensus 63 -~~~~~~~~~~~~l~~~gl~~---~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~ 138 (566)
...+..+++.++|+.+||+. ..+.++.+|||||+|||.||.||+.+|++||.||||++||...+.++.++|+++++
T Consensus 122 ~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~ 201 (316)
T COG0444 122 LSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR 201 (316)
T ss_pred hhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH
Confidence 46678889999999999985 46999999999999999999999999999999999999999999999999999976
Q ss_pred -CCCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 139 -EGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 139 -~g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
.|.|+|+||||+..+.++||||+||+.|+|++.|+++++...
T Consensus 202 e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g~~~~i~~~ 244 (316)
T COG0444 202 EKGTALILITHDLGVVAEIADRVAVMYAGRIVEEGPVEEIFKN 244 (316)
T ss_pred hcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeCCHHHHhcC
Confidence 599999999999999999999999999999999999998765
No 452
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.2e-32 Score=265.48 Aligned_cols=168 Identities=30% Similarity=0.444 Sum_probs=143.5
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+++|++.+.+ .+.+..... ......++|+||++.+++.+||.||+.++....+. ..+++.++++
T Consensus 37 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~l~ 112 (208)
T cd03268 37 AGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTARENLRLLARLLGI----RKKRIDEVLD 112 (208)
T ss_pred CCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcCC----cHHHHHHHHH
Confidence 599999999999987654 232322111 12234699999999999999999999887544332 2456788999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEAL 156 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~ 156 (566)
.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.++++++++|++++++|+|||++||+++++.++
T Consensus 113 ~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~ 192 (208)
T cd03268 113 VVGLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKV 192 (208)
T ss_pred HcCCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHh
Confidence 99999888999999999999999999999999999999999999999999999999999877899999999999999999
Q ss_pred cCEEEEEeCCEEEEec
Q psy7366 157 CTKLTIMVNGQFTCLG 172 (566)
Q Consensus 157 ~d~i~vl~~G~i~~~g 172 (566)
||++++|++|+++..|
T Consensus 193 ~d~v~~l~~g~i~~~g 208 (208)
T cd03268 193 ADRIGIINKGKLIEEG 208 (208)
T ss_pred cCEEEEEECCEEEecC
Confidence 9999999999998654
No 453
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-32 Score=281.66 Aligned_cols=178 Identities=23% Similarity=0.290 Sum_probs=151.6
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc-------------------ccccccceeEEcCCC--CCCCCCCHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT-------------------IDKNLSYIGYCPQFD--ALNDRLTPREHLEFY 56 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~-------------------~~~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~ 56 (566)
.||||++|+++|++.+.+. +.+.... .....+.||||+|+| .+++ .||.||+.|+
T Consensus 63 sGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~ 141 (320)
T PRK13631 63 SGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFG 141 (320)
T ss_pred CCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhh
Confidence 5999999999999977551 2221110 012235799999998 3554 5999999887
Q ss_pred HHhcCCChhhHHHHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHH
Q psy7366 57 SRVRNVPSVLLNTIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIER 135 (566)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~ 135 (566)
....+.+..+..+++.++++.+||+ ...++.+.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++
T Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~ 221 (320)
T PRK13631 142 PVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILD 221 (320)
T ss_pred HHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHH
Confidence 6555566666777899999999997 578999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 136 AVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 136 l~~~g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
++++|.|||++|||++++..+||||++|++|+++..|+++++..
T Consensus 222 l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 222 AKANNKTVFVITHTMEHVLEVADEVIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred HHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 97779999999999999999999999999999999999988754
No 454
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-32 Score=278.68 Aligned_cols=178 Identities=25% Similarity=0.322 Sum_probs=151.9
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc-------cccccceeEEcCCC--CCCCCCCHHHHHHHHHHhcCCChhhHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI-------DKNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLN 68 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~-------~~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~ 68 (566)
.||||++|+++|++.++.. +.+..... ......||||||+| .+++ .||.||+.|.....+.+..+..
T Consensus 44 sGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~~~~~~~~~ 122 (286)
T PRK13646 44 SGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNFKMNLDEVK 122 (286)
T ss_pred CCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHcCCCHHHHH
Confidence 5999999999999876652 33322110 12235799999997 3444 5999999987665566666777
Q ss_pred HHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEe
Q psy7366 69 TIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILT 146 (566)
Q Consensus 69 ~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviii 146 (566)
+++.++++.+||. ...++++.+||||||||++||+||+.+|++|||||||++||+.++.++.++|+++++ .|.|||++
T Consensus 123 ~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~v 202 (286)
T PRK13646 123 NYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILV 202 (286)
T ss_pred HHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 8899999999997 578899999999999999999999999999999999999999999999999999975 49999999
Q ss_pred cCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 147 SHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 147 sH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
||+++++.++||||++|++|+++..|+++++..
T Consensus 203 tH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 203 SHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred ecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999888654
No 455
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.5e-32 Score=285.50 Aligned_cols=178 Identities=22% Similarity=0.347 Sum_probs=152.0
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCc-------ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPT-------IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~-------~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.+.+ .+.+.... .....+.|||++|++.+++.+||.||+.|+.... ...+..++
T Consensus 34 sGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~--~~~~~~~~ 111 (354)
T TIGR02142 34 SGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSVRGNLRYGMKRA--RPSERRIS 111 (354)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcHHHHHHHHhhcc--ChhHHHHH
Confidence 599999999999987654 12222111 0122356999999999999999999998865432 22344567
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++++.+||+...++++.+||||||||++||+||+.+|++|||||||++||+.+++.++++|++++++ |.|||++||+
T Consensus 112 ~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~ 191 (354)
T TIGR02142 112 FERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHS 191 (354)
T ss_pred HHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecC
Confidence 899999999998899999999999999999999999999999999999999999999999999999765 8999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
++++..+||+|++|++|+++..|+++++...
T Consensus 192 ~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (354)
T TIGR02142 192 LQEVLRLADRVVVLEDGRVAAAGPIAEVWAS 222 (354)
T ss_pred HHHHHHhCCEEEEEeCCEEEEECCHHHHhcC
Confidence 9999999999999999999999999887643
No 456
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.8e-32 Score=267.33 Aligned_cols=167 Identities=25% Similarity=0.344 Sum_probs=142.4
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc------cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI------DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~------~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+.+. +.+..... ......|+|++|++.+++.+|+.||+.+.....+.+.....+++
T Consensus 39 sGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~ 118 (214)
T TIGR02673 39 AGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRV 118 (214)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5999999999999865441 22211110 01235799999999999999999999887554454445556788
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++++.+|+....++.+.+||||||||++||+||+.+|++|||||||++||+.++.++.++|++++++|+|||++||+++
T Consensus 119 ~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~ 198 (214)
T TIGR02673 119 GAALRQVGLEHKADAFPEQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS 198 (214)
T ss_pred HHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 99999999998889999999999999999999999999999999999999999999999999998777999999999999
Q ss_pred HHHhhcCEEEEEeCCE
Q psy7366 152 ECEALCTKLTIMVNGQ 167 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~ 167 (566)
++..+||+|++|++|+
T Consensus 199 ~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 199 LVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhcCEEEEecCCC
Confidence 9999999999999985
No 457
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-33 Score=251.28 Aligned_cols=180 Identities=21% Similarity=0.277 Sum_probs=158.4
Q ss_pred CCcchHHHHHhccccCCCc---cCCCC------------Cccc----ccccceeEEcCCCCCCCCCCHHHHHHHH-HHhc
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSN------------PTID----KNLSYIGYCPQFDALNDRLTPREHLEFY-SRVR 60 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~------------~~~~----~~~~~ig~v~Q~~~l~~~~tv~e~l~~~-~~~~ 60 (566)
+||||.+|+|+.+-.|... +.+.. +.+. ..+.++|||+|++.||.-|||.||+.-. -...
T Consensus 43 SGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVL 122 (256)
T COG4598 43 SGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVL 122 (256)
T ss_pred CchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhh
Confidence 5999999999998877651 11111 0101 1235799999999999999999999654 3446
Q ss_pred CCChhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCC
Q psy7366 61 NVPSVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEG 140 (566)
Q Consensus 61 ~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g 140 (566)
+.++.+..++++.+|.++|+.+..+.++..|||||+||++|||||+.+|+++++|||||+|||+-.-++...+++|+++|
T Consensus 123 g~~k~ea~e~Ae~~L~kVGi~ek~~~YP~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEg 202 (256)
T COG4598 123 GVSKAEAIERAEKYLAKVGIAEKADAYPAHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEG 202 (256)
T ss_pred cCCHHHHHHHHHHHHHHhCchhhhhcCccccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhC
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 141 RCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 141 ~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
+|.+++||.+.|+.+++.+|++|++|.|-+.|+|+++...
T Consensus 203 rTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P~qvf~n 242 (256)
T COG4598 203 RTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPPEQVFGN 242 (256)
T ss_pred CeEEEEeeehhHHHhhhhheEEeecceecccCChHHHhcC
Confidence 9999999999999999999999999999999999998653
No 458
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3e-32 Score=267.26 Aligned_cols=176 Identities=26% Similarity=0.358 Sum_probs=148.0
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc----ccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID----KNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNE 73 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~----~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 73 (566)
.||||++|++.|++.+.+ .+.+...... .....|+|+||++.+++.+|+.||+.+.....+ ..+...++.+
T Consensus 37 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~ 114 (222)
T cd03224 37 AGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR--RAKRKARLER 114 (222)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC--chhHHHHHHH
Confidence 599999999999987654 1223211111 113469999999999999999999988754433 2334556778
Q ss_pred HHHHc-CCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhH
Q psy7366 74 SLNKF-ALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEE 152 (566)
Q Consensus 74 ~l~~~-gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~ 152 (566)
+++.+ +++...++++.+||||||||++||+||+.+|++|||||||++||+.+++.++++|+++++.|.|||++||++++
T Consensus 115 ~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~ 194 (222)
T cd03224 115 VYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARF 194 (222)
T ss_pred HHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 88888 57777899999999999999999999999999999999999999999999999999997779999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 153 CEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 153 ~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
+.++||+|++|++|+++..|+++++.
T Consensus 195 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 195 ALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999988877653
No 459
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.4e-32 Score=272.06 Aligned_cols=178 Identities=20% Similarity=0.247 Sum_probs=150.6
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc----------------ccccccceeEEcCCCCCCCCCCHHHHHHHHH-Hhc
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT----------------IDKNLSYIGYCPQFDALNDRLTPREHLEFYS-RVR 60 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~----------------~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~-~~~ 60 (566)
.||||++|++.|++.+... +.+.... .......|+|+||++.+++.+||+||+.++. ...
T Consensus 42 sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~ 121 (257)
T PRK10619 42 SGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL 121 (257)
T ss_pred CCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC
Confidence 5999999999999876541 2222110 0111357999999999999999999998753 233
Q ss_pred CCChhhHHHHHHHHHHHcCCCccc-ccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC
Q psy7366 61 NVPSVLLNTIVNESLNKFALGHYS-DREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE 139 (566)
Q Consensus 61 ~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~ 139 (566)
+....+..+++.++++.+|+.... ++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++
T Consensus 122 ~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~ 201 (257)
T PRK10619 122 GLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEE 201 (257)
T ss_pred CCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhc
Confidence 444455667889999999998764 8899999999999999999999999999999999999999999999999999777
Q ss_pred CCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 140 GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 140 g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
|+|||++||+++++..+||||++|++|++++.|+++++.
T Consensus 202 g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 202 GKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred CCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999999999999999888764
No 460
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.5e-32 Score=273.63 Aligned_cols=179 Identities=24% Similarity=0.283 Sum_probs=150.5
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc--c----ccccceeEEcCCCCCCCCCCHHHHHHHHHHhc-CCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI--D----KNLSYIGYCPQFDALNDRLTPREHLEFYSRVR-NVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~--~----~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~ 70 (566)
.||||++|+++|++.|.. .+.+..... . .....|+|+||++.+++.+||.||+.+..... ..+......+
T Consensus 44 sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~ 123 (269)
T PRK11831 44 IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHST 123 (269)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHH
Confidence 599999999999987644 122221110 0 11346999999999999999999998754332 2344445567
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++++.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++ |.|||++||+
T Consensus 124 ~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~ 203 (269)
T PRK11831 124 VMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHD 203 (269)
T ss_pred HHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecC
Confidence 888999999998889999999999999999999999999999999999999999999999999998665 8999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
++++.++||+|++|++|+++..|+++++..
T Consensus 204 ~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 204 VPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999887643
No 461
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-32 Score=284.46 Aligned_cols=174 Identities=22% Similarity=0.322 Sum_probs=150.0
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc-------ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT-------IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~-------~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.+++. +.+.... .....+.|||++|++.+++.+||.||+.|... ....++
T Consensus 35 sGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~------~~~~~~ 108 (352)
T PRK11144 35 AGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKVRGNLRYGMA------KSMVAQ 108 (352)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcHHHHHHhhhh------hhhHHH
Confidence 5999999999999876541 2221111 01123579999999999999999999987642 123467
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++++.+||+...++++.+||||||||++||+||+.+|++|||||||++||+.+++.+++.|+++.++ |.|||++|||
T Consensus 109 ~~~~l~~~gl~~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd 188 (352)
T PRK11144 109 FDKIVALLGIEPLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHS 188 (352)
T ss_pred HHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecC
Confidence 889999999998899999999999999999999999999999999999999999999999999998765 8999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
++++..+||||++|++|+++..|+++++...
T Consensus 189 ~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 189 LDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred HHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 9999999999999999999999999988654
No 462
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2e-32 Score=269.50 Aligned_cols=174 Identities=22% Similarity=0.299 Sum_probs=144.7
Q ss_pred CCcchHHHHHhccc-----cCCC---ccCCCCCc-----ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCCh-hh
Q psy7366 1 MGLTTTPKRVVTLL-----LTTQ---KVPGSNPT-----IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPS-VL 66 (566)
Q Consensus 1 ~Gktt~~k~~~~~~-----~~~~---~~~~~~~~-----~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~-~~ 66 (566)
.||||++|+++|++ .+.+ .+.+.... ......+|||+||++.++ .+||.||+.+.....+... .+
T Consensus 37 sGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~~~~~~ 115 (227)
T cd03260 37 CGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGIKLKEE 115 (227)
T ss_pred CCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCCCcHHH
Confidence 59999999999998 5543 12222111 011235799999999888 7999999988655444322 23
Q ss_pred HHHHHHHHHHHcCCCcccccc--cccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Q psy7366 67 LNTIVNESLNKFALGHYSDRE--VRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVI 144 (566)
Q Consensus 67 ~~~~~~~~l~~~gl~~~~~~~--~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi 144 (566)
..+++.++++.+|+....++. +.+||||||||++||+||+.+|++|||||||++||+.++++++++|++++++ .|||
T Consensus 116 ~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii 194 (227)
T cd03260 116 LDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIV 194 (227)
T ss_pred HHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEE
Confidence 567888999999998776666 5999999999999999999999999999999999999999999999999776 9999
Q ss_pred EecCChhHHHhhcCEEEEEeCCEEEEecChhH
Q psy7366 145 LTSHNMEECEALCTKLTIMVNGQFTCLGSATH 176 (566)
Q Consensus 145 iisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~ 176 (566)
++||+++++.++||+|++|++|+++..|++++
T Consensus 195 ~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 195 IVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999998887654
No 463
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.1e-32 Score=265.10 Aligned_cols=165 Identities=27% Similarity=0.345 Sum_probs=138.3
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcccccccceeEEcCCCCC-CCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTIDKNLSYIGYCPQFDAL-NDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~~~~~~ig~v~Q~~~l-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+++|++.|.+. +.+.........++|||++|++.+ +..+|+.||+.++....+ ...+++.++++
T Consensus 37 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~----~~~~~~~~~l~ 112 (205)
T cd03226 37 AGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVREELLLGLKELD----AGNEQAETVLK 112 (205)
T ss_pred CCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHHHHHhhhhhhcC----ccHHHHHHHHH
Confidence 5999999999999876551 222221111223479999999843 346799999987654332 12357889999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHHHhh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEAL 156 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~~~~ 156 (566)
.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|.|||++||+++++.++
T Consensus 113 ~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~ 192 (205)
T cd03226 113 DLDLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKV 192 (205)
T ss_pred HcCCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHh
Confidence 99999888999999999999999999999999999999999999999999999999999977799999999999999999
Q ss_pred cCEEEEEeCCEEE
Q psy7366 157 CTKLTIMVNGQFT 169 (566)
Q Consensus 157 ~d~i~vl~~G~i~ 169 (566)
||+|++|++|+++
T Consensus 193 ~d~i~~l~~G~iv 205 (205)
T cd03226 193 CDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEEECCEEC
Confidence 9999999999974
No 464
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-32 Score=265.30 Aligned_cols=170 Identities=28% Similarity=0.367 Sum_probs=143.4
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc-------ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT-------IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~-------~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.+.+. +.+.... .......|+|++|++.+++.+|+.||+.+..... ......++
T Consensus 34 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~ 111 (214)
T cd03297 34 AGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNVRENLAFGLKRK--RNREDRIS 111 (214)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCHHHHHHHHHhhC--CHHHHHHH
Confidence 5999999999999876541 2222111 0112346999999999999999999998764322 22334567
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++++.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++ |.|||++||+
T Consensus 112 ~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~ 191 (214)
T cd03297 112 VDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHD 191 (214)
T ss_pred HHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecC
Confidence 889999999988889999999999999999999999999999999999999999999999999999765 8999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEec
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLG 172 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g 172 (566)
++++..+||++++|++|+++..|
T Consensus 192 ~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 192 LSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999998654
No 465
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.6e-32 Score=266.71 Aligned_cols=170 Identities=18% Similarity=0.210 Sum_probs=145.8
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc---cc---cccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI---DK---NLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~---~~---~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+.+. +.+..... .. ....++|+||++.+++.+|+.||+.+.....+.+..+..+++
T Consensus 39 sGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~ 118 (222)
T PRK10908 39 AGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRV 118 (222)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHH
Confidence 5999999999999876541 22221111 01 235799999999988899999999887655555555566778
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++++.+|+....++.+.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++|.|||++||+++
T Consensus 119 ~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~ 198 (222)
T PRK10908 119 SAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG 198 (222)
T ss_pred HHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 89999999998889999999999999999999999999999999999999999999999999999777999999999999
Q ss_pred HHHhhcCEEEEEeCCEEEE
Q psy7366 152 ECEALCTKLTIMVNGQFTC 170 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~ 170 (566)
++..+||||++|++|+++.
T Consensus 199 ~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 199 LISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHhCCEEEEEECCEEcc
Confidence 9999999999999999864
No 466
>cd03271 ABC_UvrA_II The excision repair protein UvrA domain II; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=100.00 E-value=5.2e-32 Score=269.17 Aligned_cols=195 Identities=23% Similarity=0.303 Sum_probs=156.2
Q ss_pred ceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHH--------CC--CCCCc-----------cEEEEcCccCCCch----
Q psy7366 360 PAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLT--------GA--IKPTS-----------GNAYVMNHSIRDSM---- 414 (566)
Q Consensus 360 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~--------G~--~~~~~-----------G~i~~~g~~~~~~~---- 414 (566)
.-|+|+|++|+.|.+++|+|++|||||||++.+. +. ..|.. --|.++..++....
T Consensus 9 ~nl~~v~~~ip~g~~~~vtGvSGsGKStL~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~vdq~pi~~~~rs~~ 88 (261)
T cd03271 9 NNLKNIDVDIPLGVLTCVTGVSGSGKSSLINDTLYPALARRLHLKKEQPGNHDRIEGLEHIDKVIVIDQSPIGRTPRSNP 88 (261)
T ss_pred hcCCCceeeccCCcEEEEECCCCCchHHHHHHHHHHHHHHHhcccccCCCcccccccccccCceEEecCCcCCCCCCCcH
Confidence 3589999999999999999999999999998662 11 01211 13677777664311
Q ss_pred -------HHhcC----------------ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCC-c
Q psy7366 415 -------DLVRS----------------YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGH-Y 470 (566)
Q Consensus 415 -------~~~~~----------------~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~ 470 (566)
+.+|+ .+.|..++...+..+|+.|++.|+..... ..++.++++.+||.. .
T Consensus 89 ~ty~~~~~~ir~~fC~~C~G~r~~~~~l~~~~~g~~i~~v~~ltv~e~~~~~~~~~~------~~~~~~~L~~vgL~~l~ 162 (261)
T cd03271 89 ATYTGVFDEIRELFCEVCKGKRYNRETLEVRYKGKSIADVLDMTVEEALEFFENIPK------IARKLQTLCDVGLGYIK 162 (261)
T ss_pred HHHHHHHHHHHHhcCccccccccCHHHHhcCcCCCCHHHHhcCCHHHHHHHHHhhhh------HHHHHHHHHHcCCchhh
Confidence 11111 14455555555678999999988765321 235678999999987 5
Q ss_pred cccCcCcCChhHHHHHHHHHHHcCC---CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEE
Q psy7366 471 SDREVRTLSGGNKRKLSTAIALLGN---PPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKL 547 (566)
Q Consensus 471 ~~~~~~~LSgGqkqrv~la~al~~~---p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv 547 (566)
+++++.+|||||+||+.||++|+.+ |+++||||||+|||+..+..+.+.|++++++|.|||++||+++++. .||++
T Consensus 163 l~~~~~~LSgGe~QRl~LAraL~~~~~~p~lllLDEPtsgLD~~~~~~l~~~L~~l~~~g~tvIiitH~~~~i~-~aD~i 241 (261)
T cd03271 163 LGQPATTLSGGEAQRIKLAKELSKRSTGKTLYILDEPTTGLHFHDVKKLLEVLQRLVDKGNTVVVIEHNLDVIK-CADWI 241 (261)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCCCcEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH-hCCEE
Confidence 7999999999999999999999996 7999999999999999999999999999888999999999999986 69999
Q ss_pred EEE------ECCEEEEecCc
Q psy7366 548 TIM------VNGQFTCLGSA 561 (566)
Q Consensus 548 ~~l------~~G~i~~~g~~ 561 (566)
++| ++|+|+++|++
T Consensus 242 i~Lgp~~g~~~G~iv~~Gt~ 261 (261)
T cd03271 242 IDLGPEGGDGGGQVVASGTP 261 (261)
T ss_pred EEecCCcCCCCCEEEEeCCC
Confidence 999 89999999874
No 467
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.4e-32 Score=266.39 Aligned_cols=168 Identities=23% Similarity=0.292 Sum_probs=143.8
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc------cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI------DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~------~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+... +.+..... ......|+|++|++.+++.+|+.||+.+.....+.+..+..+++
T Consensus 38 sGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~ 117 (214)
T cd03292 38 AGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRV 117 (214)
T ss_pred CCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5999999999999876541 22221110 01234699999999999999999999887655555555566788
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++.+.+.|++++++|.|||++||+++
T Consensus 118 ~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~ 197 (214)
T cd03292 118 PAALELVGLSHKHRALPAELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE 197 (214)
T ss_pred HHHHHHcCCHHHhhCChhhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 99999999998889999999999999999999999999999999999999999999999999999777999999999999
Q ss_pred HHHhhcCEEEEEeCCEE
Q psy7366 152 ECEALCTKLTIMVNGQF 168 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i 168 (566)
++.++||+|++|++|++
T Consensus 198 ~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 198 LVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHhCCEEEEEeCCcC
Confidence 99999999999999974
No 468
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.3e-32 Score=271.75 Aligned_cols=177 Identities=23% Similarity=0.282 Sum_probs=147.4
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc------cccccceeEEcCCCCCCCCCCHHHHHHHHHHh--------cCCC
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI------DKNLSYIGYCPQFDALNDRLTPREHLEFYSRV--------RNVP 63 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~------~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~--------~~~~ 63 (566)
.||||++|+++|++.+.+ .+.+..... ......+||+||++.+++.+||.||+.+.... .+..
T Consensus 39 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~ 118 (243)
T TIGR02315 39 AGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRF 118 (243)
T ss_pred CCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccc
Confidence 599999999999986544 122221110 01235699999999999999999999764321 1112
Q ss_pred hhhHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCE
Q psy7366 64 SVLLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRC 142 (566)
Q Consensus 64 ~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~t 142 (566)
..+..+++.++++.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++ |+|
T Consensus 119 ~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~t 198 (243)
T TIGR02315 119 SEEDKERALSALERVGLADKAYQRADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGIT 198 (243)
T ss_pred cHHHHHHHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCE
Confidence 2334567889999999998889999999999999999999999999999999999999999999999999998654 899
Q ss_pred EEEecCChhHHHhhcCEEEEEeCCEEEEecChhHH
Q psy7366 143 VILTSHNMEECEALCTKLTIMVNGQFTCLGSATHL 177 (566)
Q Consensus 143 viiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~ 177 (566)
||++||+++++.++||+|++|++|+++..|+++++
T Consensus 199 iii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 199 VIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred EEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999988775
No 469
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3e-32 Score=268.64 Aligned_cols=173 Identities=24% Similarity=0.267 Sum_probs=145.2
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHh--cCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRV--RNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~--~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.+.. .+.+.... ......+|++|++.+++.+||.||+.+.... .+.+..+..+++.+++
T Consensus 22 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~--~~~~~~~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l 99 (230)
T TIGR01184 22 CGKSTLLNLISGLAQPTSGGVILEGKQIT--EPGPDRMVVFQNYSLLPWLTVRENIALAVDRVLPDLSKSERRAIVEEHI 99 (230)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEECC--CCChhheEEecCcccCCCCCHHHHHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 599999999999987654 12222111 1112358999999999999999999875321 2344445566789999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHH
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECE 154 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~ 154 (566)
+.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.+.|++++++ |+|||++||+++++.
T Consensus 100 ~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~ 179 (230)
T TIGR01184 100 ALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEAL 179 (230)
T ss_pred HHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 9999998889999999999999999999999999999999999999999999999999998664 899999999999999
Q ss_pred hhcCEEEEEeCCEEEEecChh
Q psy7366 155 ALCTKLTIMVNGQFTCLGSAT 175 (566)
Q Consensus 155 ~~~d~i~vl~~G~i~~~g~~~ 175 (566)
++||||++|++|+++..|+..
T Consensus 180 ~~~d~v~~l~~G~i~~~~~~~ 200 (230)
T TIGR01184 180 LLSDRVVMLTNGPAANIGQIL 200 (230)
T ss_pred HhcCEEEEEeCCcEecccCce
Confidence 999999999999999877543
No 470
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-32 Score=264.74 Aligned_cols=171 Identities=18% Similarity=0.248 Sum_probs=142.2
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+++|++.+.+ .+.+..... ......+||++|++.+++.+|+.||+.+............++++.++++
T Consensus 35 sGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~ 114 (211)
T cd03298 35 SGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALA 114 (211)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHH
Confidence 599999999999987654 122221111 1123569999999999999999999987543211112234567889999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~~ 155 (566)
.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|+++++ .|.|||++||+++++.+
T Consensus 115 ~~~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~ 194 (211)
T cd03298 115 RVGLAGLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKR 194 (211)
T ss_pred HcCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHh
Confidence 99999888999999999999999999999999999999999999999999999999999865 49999999999999999
Q ss_pred hcCEEEEEeCCEEEEe
Q psy7366 156 LCTKLTIMVNGQFTCL 171 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~ 171 (566)
+||||++|++|+++..
T Consensus 195 ~~d~i~~l~~G~i~~~ 210 (211)
T cd03298 195 LAQRVVFLDNGRIAAQ 210 (211)
T ss_pred hhCEEEEEECCEEeec
Confidence 9999999999999864
No 471
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.6e-32 Score=266.90 Aligned_cols=178 Identities=26% Similarity=0.439 Sum_probs=151.0
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc--cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI--DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESL 75 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~--~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l 75 (566)
.||||++|+++|++.|... +.+..... ......++|+||++.+++.+|+.||+.+.....+.+..+..+++.+++
T Consensus 38 sGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l 117 (236)
T TIGR03864 38 AGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALL 117 (236)
T ss_pred CCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 5999999999999876541 22221111 111246999999999888999999998776554555555667789999
Q ss_pred HHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHH
Q psy7366 76 NKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECE 154 (566)
Q Consensus 76 ~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~ 154 (566)
+.+|++...++.+.+||||||||++||+||+.+|++|||||||++||+.+++++.++|+++++ .|.|||++||+++++.
T Consensus 118 ~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~ 197 (236)
T TIGR03864 118 ARLGLAERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIE 197 (236)
T ss_pred HHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHh
Confidence 999999888999999999999999999999999999999999999999999999999999874 5899999999999997
Q ss_pred hhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 155 ALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 155 ~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
. ||+|++|++|+++..|+++++..
T Consensus 198 ~-~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 198 A-DDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred h-CCEEEEEeCCeEEEeCCHHHHHH
Confidence 5 99999999999999999887754
No 472
>KOG0054|consensus
Probab=100.00 E-value=5.4e-32 Score=312.85 Aligned_cols=204 Identities=22% Similarity=0.379 Sum_probs=174.3
Q ss_pred CCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCCchHHhcC
Q psy7366 340 GDVLVVKRLFKIYANSKGTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVRS 419 (566)
Q Consensus 340 ~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 419 (566)
...++++|.+++++. .+..+.|+||||+|++|+.+||+||-|||||+||.+|.|.++..+|+|.++|
T Consensus 516 ~~~i~i~~~sfsW~~-~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g------------ 582 (1381)
T KOG0054|consen 516 ENAIEIKNGSFSWDS-ESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG------------ 582 (1381)
T ss_pred CceEEEeeeeEecCC-CCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC------------
Confidence 457999999999875 3345589999999999999999999999999999999999999999999998
Q ss_pred ceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHHHHHHHHcCCCCcc-----------ccCcCcCChhHHHHHHH
Q psy7366 420 YIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNKFALGHYS-----------DREVRTLSGGNKRKLST 488 (566)
Q Consensus 420 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGqkqrv~l 488 (566)
.++||||.|.+++. ||+|||.|+.. .++++.++.++...|.++. ..+.-+||||||||++|
T Consensus 583 siaYv~Q~pWI~ng-TvreNILFG~~-------~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsL 654 (1381)
T KOG0054|consen 583 SVAYVPQQPWIQNG-TVRENILFGSP-------YDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISL 654 (1381)
T ss_pred eEEEeccccHhhCC-cHHHhhhcCcc-------ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHH
Confidence 39999999998876 99999988643 2345566777777665432 34566999999999999
Q ss_pred HHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCcEEEEEccCHHHHHhhCCEEEEEECCEEEEecCccccc
Q psy7366 489 AIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 565 (566)
Q Consensus 489 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~tvl~vsHd~~~~~~~~drv~~l~~G~i~~~g~~~~l~ 565 (566)
|||+.++++|+|||.|+|++|.+.-+.+++-.-.-.-+++|+|+|||.++++.+ ||.|++|++|+|++.|+.+++.
T Consensus 655 ARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~-ad~Iivl~~G~I~~~Gty~el~ 730 (1381)
T KOG0054|consen 655 ARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPH-ADQIIVLKDGKIVESGTYEELL 730 (1381)
T ss_pred HHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhh-CCEEEEecCCeEecccCHHHHH
Confidence 999999999999999999999998887776443333347999999999888765 9999999999999999998874
No 473
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-32 Score=266.72 Aligned_cols=172 Identities=22% Similarity=0.295 Sum_probs=144.7
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcccc-------cccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTIDK-------NLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~~-------~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.+.+. +.+....... ....|||+||++.+++.+|+.||+.+.....+.+..+..++
T Consensus 46 sGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~ 125 (233)
T PRK11629 46 SGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSR 125 (233)
T ss_pred CCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHH
Confidence 5999999999999866541 2222111100 12469999999999999999999988654444455556678
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~ 149 (566)
+.++++.+|++...++.+.+||||||||++||+||+.+|++|||||||++||+.+++++.++|+++++ .|+|||++||+
T Consensus 126 ~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~ 205 (233)
T PRK11629 126 ALEMLAAVGLEHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHD 205 (233)
T ss_pred HHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 89999999999888999999999999999999999999999999999999999999999999999865 58999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEEEecC
Q psy7366 150 MEECEALCTKLTIMVNGQFTCLGS 173 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~~~g~ 173 (566)
++++.. +|++++|++|+++..++
T Consensus 206 ~~~~~~-~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 206 LQLAKR-MSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHh-hCEEEEEECCEEEEEec
Confidence 999987 57999999999987664
No 474
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=6.5e-32 Score=268.41 Aligned_cols=177 Identities=23% Similarity=0.326 Sum_probs=150.0
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCc---------ccccccceeEEcCCCCCCCCCCHHHHHHHH-HHhcCCChhhH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPT---------IDKNLSYIGYCPQFDALNDRLTPREHLEFY-SRVRNVPSVLL 67 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~---------~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~-~~~~~~~~~~~ 67 (566)
.||||++|+++|++.+.+ .+.+.... .......|+|+||++.+++.+||.||+.+. ....+.+..+.
T Consensus 39 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~ 118 (242)
T PRK11124 39 AGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQA 118 (242)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHH
Confidence 599999999999987654 12222110 011235799999999999999999999753 33334444555
Q ss_pred HHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEec
Q psy7366 68 NTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTS 147 (566)
Q Consensus 68 ~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiis 147 (566)
.+++.++++.+|++...++.+.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|+|||++|
T Consensus 119 ~~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~s 198 (242)
T PRK11124 119 LARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVT 198 (242)
T ss_pred HHHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 67889999999999888999999999999999999999999999999999999999999999999999977799999999
Q ss_pred CChhHHHhhcCEEEEEeCCEEEEecChhHH
Q psy7366 148 HNMEECEALCTKLTIMVNGQFTCLGSATHL 177 (566)
Q Consensus 148 H~~~~~~~~~d~i~vl~~G~i~~~g~~~~~ 177 (566)
|+++++.++||++++|++|+++..|+++++
T Consensus 199 h~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 199 HEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred CCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 999999999999999999999999987765
No 475
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=99.98 E-value=8.5e-32 Score=268.41 Aligned_cols=177 Identities=22% Similarity=0.296 Sum_probs=149.6
Q ss_pred CCcchHHHHHhccccCC-----C---ccCCCCCc-----ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcC-CChhh
Q psy7366 1 MGLTTTPKRVVTLLLTT-----Q---KVPGSNPT-----IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRN-VPSVL 66 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~-----~---~~~~~~~~-----~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~-~~~~~ 66 (566)
.||||++|++.|++.|. + .+.+.... .......|+|+||++.+++ .|+.||+.+.....+ .+..+
T Consensus 38 sGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~ 116 (247)
T TIGR00972 38 CGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHGIKDKKE 116 (247)
T ss_pred CCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcCCCCHHH
Confidence 59999999999999754 3 12222211 1122357999999999888 999999988655444 23445
Q ss_pred HHHHHHHHHHHcCCC----cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCE
Q psy7366 67 LNTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRC 142 (566)
Q Consensus 67 ~~~~~~~~l~~~gl~----~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~t 142 (566)
..+++.++++.+|+. ...++++.+||||||||++||+||+.+|++|||||||++||+.++..+.++|+++++ +.|
T Consensus 117 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~t 195 (247)
T TIGR00972 117 LDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYT 195 (247)
T ss_pred HHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCe
Confidence 567889999999998 667899999999999999999999999999999999999999999999999999866 489
Q ss_pred EEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 143 VILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 143 viiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
||++||+++++.++||+|++|++|+++..|+++++..
T Consensus 196 iiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 196 IVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred EEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999999888643
No 476
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=5.3e-32 Score=268.88 Aligned_cols=178 Identities=29% Similarity=0.432 Sum_probs=151.0
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc----cccccceeEEcCCCCCCCCCCHHHHHHHHHHhc-CCChhhHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI----DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVR-NVPSVLLNTIVN 72 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~-~~~~~~~~~~~~ 72 (566)
.||||++|++.|++.+.. .+.+..... ......|+|+||++.+++.+||.||+.+..... +.+..+...++.
T Consensus 40 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ 119 (241)
T PRK10895 40 AGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRAN 119 (241)
T ss_pred CCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHH
Confidence 599999999999987644 122221111 112356999999999999999999998764332 233445567889
Q ss_pred HHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhH
Q psy7366 73 ESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEE 152 (566)
Q Consensus 73 ~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~ 152 (566)
++++.+|++...++++.+|||||+||++||+||+.+|++|||||||++||+.++++++++|++++++|.|||++||++++
T Consensus 120 ~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~ 199 (241)
T PRK10895 120 ELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRE 199 (241)
T ss_pred HHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHH
Confidence 99999999888899999999999999999999999999999999999999999999999999987779999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 153 CEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 153 ~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
+..+||+|++|++|+++..|+++++.
T Consensus 200 ~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 200 TLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred HHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 99999999999999999999988764
No 477
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=5.8e-32 Score=274.70 Aligned_cols=179 Identities=20% Similarity=0.296 Sum_probs=152.7
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCc-----ccccccceeEEcCCCC-CCCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPT-----IDKNLSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~-----~~~~~~~ig~v~Q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+.+ .+.+.... .......|||+||++. .+...||.||+.+.....+.+..+..+++
T Consensus 43 aGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 122 (283)
T PRK13636 43 AGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRV 122 (283)
T ss_pred CCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHH
Confidence 599999999999987655 23332211 0122357999999984 23457999999887655566666667789
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCCh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM 150 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~ 150 (566)
.++++.+||....++++.+||||||||++||+||+.+|++|||||||++||+.++..+.++|++++++ |.|||++||++
T Consensus 123 ~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~ 202 (283)
T PRK13636 123 DNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDI 202 (283)
T ss_pred HHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCH
Confidence 99999999998899999999999999999999999999999999999999999999999999999765 99999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+++..+||||++|++|++++.|+++++..
T Consensus 203 ~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 203 DIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999988754
No 478
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.2e-32 Score=269.88 Aligned_cols=172 Identities=23% Similarity=0.292 Sum_probs=146.5
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLNK 77 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 77 (566)
.||||++|+++|++.+... +.+.... .....+||++|++.+++.+||.||+.+.....+.+..+..+++.++++.
T Consensus 38 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~--~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~ 115 (255)
T PRK11248 38 CGKTTLLNLIAGFVPYQHGSITLDGKPVE--GPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKK 115 (255)
T ss_pred CCHHHHHHHHhCCCCCCCcEEEECCEECC--CCCCcEEEEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHH
Confidence 5999999999999876541 2222111 1123599999999999999999999876554455555566788999999
Q ss_pred cCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEecCChhHHHhh
Q psy7366 78 FALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-EGRCVILTSHNMEECEAL 156 (566)
Q Consensus 78 ~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiisH~~~~~~~~ 156 (566)
+|+....++++.+||||||||++||+||+.+|++|||||||++||+.++.++.++|+++++ .|.|||++||+++++..+
T Consensus 116 ~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~ 195 (255)
T PRK11248 116 VGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFM 195 (255)
T ss_pred cCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHh
Confidence 9999888999999999999999999999999999999999999999999999999999854 589999999999999999
Q ss_pred cCEEEEEe--CCEEEEecCh
Q psy7366 157 CTKLTIMV--NGQFTCLGSA 174 (566)
Q Consensus 157 ~d~i~vl~--~G~i~~~g~~ 174 (566)
||+|++|+ +|+++..++.
T Consensus 196 ~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 196 ATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CCEEEEEeCCCcEEEEEecC
Confidence 99999999 5999987654
No 479
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=9.1e-32 Score=269.88 Aligned_cols=177 Identities=19% Similarity=0.250 Sum_probs=148.1
Q ss_pred CCcchHHHHHhccccC-------CC-ccCCCCCcc-----cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhH
Q psy7366 1 MGLTTTPKRVVTLLLT-------TQ-KVPGSNPTI-----DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLL 67 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~-------~~-~~~~~~~~~-----~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~ 67 (566)
.||||++|++.|++.+ |+ .+.+..... ......+||+||++.+++ +|+.||+.+.....+.+....
T Consensus 49 sGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~ 127 (258)
T PRK14268 49 CGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHGANKKDL 127 (258)
T ss_pred CCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCHHHH
Confidence 5999999999999753 32 122221110 112356999999998887 899999998765555555555
Q ss_pred HHHHHHHHHHcCCC----cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Q psy7366 68 NTIVNESLNKFALG----HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCV 143 (566)
Q Consensus 68 ~~~~~~~l~~~gl~----~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tv 143 (566)
.+++.++++.+|+. ...++++.+||||||||++||+||+.+|++|||||||++||+.++.+++++|+++++ |+||
T Consensus 128 ~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~ti 206 (258)
T PRK14268 128 DGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTI 206 (258)
T ss_pred HHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEE
Confidence 66788999999984 456889999999999999999999999999999999999999999999999999854 8999
Q ss_pred EEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 144 ILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 144 iiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
|++||+++++.++||||++|++|+++..|+++++..
T Consensus 207 iivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 207 VIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred EEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999888753
No 480
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=99.98 E-value=4e-32 Score=256.68 Aligned_cols=178 Identities=26% Similarity=0.386 Sum_probs=149.7
Q ss_pred CCcchHHHHHhccccCC--C------ccCCCCCcccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTT--Q------KVPGSNPTIDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVN 72 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~--~------~~~~~~~~~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~ 72 (566)
.|||||+|+|+|++.+. + .++..++. ...+.+|+||||...+|+.+||+||+..+.....- ........+
T Consensus 40 aGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~-~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~-~~~~~~~~e 117 (237)
T COG0410 40 AGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPH-ERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD-KEAQERDLE 117 (237)
T ss_pred CCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHH-HHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc-cccccccHH
Confidence 59999999999998763 2 23332222 23357899999999999999999999887544321 111222277
Q ss_pred HHHHHcC-CCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCCh
Q psy7366 73 ESLNKFA-LGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNM 150 (566)
Q Consensus 73 ~~l~~~g-l~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~ 150 (566)
++.+.|- |.+.++++.++|||||||.++|||||+.+|++|+|||||.||-|.-++++++.|++++++ |.||++++++.
T Consensus 118 ~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~ 197 (237)
T COG0410 118 EVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNA 197 (237)
T ss_pred HHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccH
Confidence 7888875 667889999999999999999999999999999999999999999999999999999866 78999999999
Q ss_pred hHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 151 EECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 151 ~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
.++.+++||.+||++|+|+..|+.+++..+
T Consensus 198 ~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 198 RFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred HHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999998654
No 481
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=99.98 E-value=4.9e-32 Score=263.68 Aligned_cols=167 Identities=28% Similarity=0.376 Sum_probs=140.2
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc---cccccceeEEcCCCCC-CCCCCHHHHHHHHHHhcCCChhhHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI---DKNLSYIGYCPQFDAL-NDRLTPREHLEFYSRVRNVPSVLLNTIVNE 73 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~---~~~~~~ig~v~Q~~~l-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 73 (566)
.||||++|+++|++.+.+. +.+..... ......|+|+||++.+ ++.+|+.||+.+.....+.+.....+++.+
T Consensus 38 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~ 117 (211)
T cd03225 38 SGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEE 117 (211)
T ss_pred CCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5999999999999876541 22221110 1123579999999853 567899999987654444444455667889
Q ss_pred HHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhHH
Q psy7366 74 SLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEEC 153 (566)
Q Consensus 74 ~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~~ 153 (566)
+++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|.|||++||+++++
T Consensus 118 ~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~ 197 (211)
T cd03225 118 ALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLL 197 (211)
T ss_pred HHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 99999998888999999999999999999999999999999999999999999999999999977799999999999999
Q ss_pred HhhcCEEEEEeCCE
Q psy7366 154 EALCTKLTIMVNGQ 167 (566)
Q Consensus 154 ~~~~d~i~vl~~G~ 167 (566)
..+||+|++|++|+
T Consensus 198 ~~~~d~i~~l~~G~ 211 (211)
T cd03225 198 LELADRVIVLEDGK 211 (211)
T ss_pred HHhCCEEEEEeCCC
Confidence 99999999999985
No 482
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.1e-31 Score=277.30 Aligned_cols=180 Identities=19% Similarity=0.225 Sum_probs=152.1
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc------cccccceeEEcCCC--CCCCCCCHHHHHHHHHHhc-CCChhhHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI------DKNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVR-NVPSVLLN 68 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~------~~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~-~~~~~~~~ 68 (566)
.||||++|+|+|++.+.. .+.+..... .....+|+||||+| .+++.+|+.+++.+..... +....+..
T Consensus 52 sGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~ 131 (327)
T PRK11308 52 CGKSTLARLLTMIETPTGGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERR 131 (327)
T ss_pred CcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHH
Confidence 599999999999986543 122221111 01234799999998 5788899999997654433 45556667
Q ss_pred HHHHHHHHHcCCCc-ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEe
Q psy7366 69 TIVNESLNKFALGH-YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILT 146 (566)
Q Consensus 69 ~~~~~~l~~~gl~~-~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviii 146 (566)
+++.++++.+||.. ..++++.+|||||+||++||+||+.+|++||+||||++||+.++.+++++|++++++ |.|||+|
T Consensus 132 ~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~i 211 (327)
T PRK11308 132 EKALAMMAKVGLRPEHYDRYPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFI 211 (327)
T ss_pred HHHHHHHHHCCCChHHhcCCCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 88999999999974 679999999999999999999999999999999999999999999999999999764 9999999
Q ss_pred cCChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 147 SHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 147 sH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
|||++++..+||||++|++|++++.|+.+++...
T Consensus 212 THdl~~~~~~adrv~vm~~G~ive~g~~~~~~~~ 245 (327)
T PRK11308 212 SHDLSVVEHIADEVMVMYLGRCVEKGTKEQIFNN 245 (327)
T ss_pred eCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999988653
No 483
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=9.3e-32 Score=272.45 Aligned_cols=179 Identities=21% Similarity=0.306 Sum_probs=152.1
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc---cccccceeEEcCCCC-CCCCCCHHHHHHHHHHhcCCChhhHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI---DKNLSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNE 73 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~---~~~~~~ig~v~Q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 73 (566)
.||||++|+++|++.+.+. +.+..... ......|||++|++. .+...||.||+.+.....+.+.....+++.+
T Consensus 41 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~ 120 (277)
T PRK13652 41 AGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSS 120 (277)
T ss_pred CCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHH
Confidence 5999999999999876652 22321111 122346999999984 3346899999987665445666666778899
Q ss_pred HHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhH
Q psy7366 74 SLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEE 152 (566)
Q Consensus 74 ~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~ 152 (566)
+++.+||....++.+.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++ |.|||++||++++
T Consensus 121 ~l~~~~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~ 200 (277)
T PRK13652 121 ALHMLGLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDL 200 (277)
T ss_pred HHHHCCChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH
Confidence 999999998899999999999999999999999999999999999999999999999999999765 9999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 153 CEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 153 ~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+.++||||++|++|+++..|+++++..
T Consensus 201 ~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 201 VPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999999999999999999988753
No 484
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=7.7e-32 Score=272.53 Aligned_cols=178 Identities=24% Similarity=0.305 Sum_probs=151.7
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc----cccccceeEEcCCCCC-CCCCCHHHHHHHHHHhcCCChhhHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI----DKNLSYIGYCPQFDAL-NDRLTPREHLEFYSRVRNVPSVLLNTIVN 72 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~----~~~~~~ig~v~Q~~~l-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~ 72 (566)
.||||++|+++|++.+... +.+..... ......|||+||+|.. +...|+.||+.+.....+.+..+..+++.
T Consensus 39 sGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~ 118 (274)
T PRK13644 39 SGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVD 118 (274)
T ss_pred CCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHH
Confidence 5999999999999876541 33322111 1123569999999863 56789999998876555566666777899
Q ss_pred HHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChhH
Q psy7366 73 ESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNMEE 152 (566)
Q Consensus 73 ~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~~ 152 (566)
++++.+||+...++++.+||||||||++||+||+.+|++|||||||++||+.++..++++|++++++|.|||++||++++
T Consensus 119 ~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~ 198 (274)
T PRK13644 119 RALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEE 198 (274)
T ss_pred HHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999998779999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 153 CEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 153 ~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+. .||||++|++|+++..|+++++..
T Consensus 199 ~~-~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 199 LH-DADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred Hh-hCCEEEEEECCEEEEECCHHHHhc
Confidence 95 699999999999999999888653
No 485
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=99.98 E-value=8.2e-32 Score=263.97 Aligned_cols=168 Identities=21% Similarity=0.296 Sum_probs=140.6
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCccc---c----cccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTID---K----NLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~---~----~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.+... +.+...... . ....|+|++|++.+++.+||+||+.+.......+..+..++
T Consensus 42 sGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~ 121 (221)
T TIGR02211 42 SGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKER 121 (221)
T ss_pred CCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHH
Confidence 5999999999999876541 222211110 0 11469999999999989999999988654444444445667
Q ss_pred HHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCC
Q psy7366 71 VNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHN 149 (566)
Q Consensus 71 ~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~ 149 (566)
+.++++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++ |.|||++||+
T Consensus 122 ~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~ 201 (221)
T TIGR02211 122 AYEMLEKVGLEHRINHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHD 201 (221)
T ss_pred HHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 889999999998889999999999999999999999999999999999999999999999999998764 8999999999
Q ss_pred hhHHHhhcCEEEEEeCCEEE
Q psy7366 150 MEECEALCTKLTIMVNGQFT 169 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~G~i~ 169 (566)
++++.. ||+|++|++|+++
T Consensus 202 ~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 202 LELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred HHHHhh-cCEEEEEeCCEec
Confidence 999865 8999999999975
No 486
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=99.98 E-value=5.4e-32 Score=263.75 Aligned_cols=168 Identities=24% Similarity=0.378 Sum_probs=138.5
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcccccccceeEEcCCCCCC--CCCCHHHHHHHHHHhcC----CChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTIDKNLSYIGYCPQFDALN--DRLTPREHLEFYSRVRN----VPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~~~~~~~ig~v~Q~~~l~--~~~tv~e~l~~~~~~~~----~~~~~~~~~~ 71 (566)
.||||++|++.|++.|.+. +.+.... .....|+|+||++.++ ..+||.||+.+...... .......+++
T Consensus 36 sGKSTLl~~l~G~~~p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~ 113 (213)
T cd03235 36 AGKSTLLKAILGLLKPTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKV 113 (213)
T ss_pred CCHHHHHHHHcCCCCCCCCEEEECCccHH--HHHhheEEeccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHH
Confidence 5999999999999876541 2222111 2235699999998764 34899999987543211 1223445678
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++++.+|++...++++.+||||||||++||+||+.+|++|||||||++||+.+++++.++|++++++|.|||++||+++
T Consensus 114 ~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~ 193 (213)
T cd03235 114 DEALERVGLSELADRQIGELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLG 193 (213)
T ss_pred HHHHHHcCCHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 99999999988889999999999999999999999999999999999999999999999999998778999999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEe
Q psy7366 152 ECEALCTKLTIMVNGQFTCL 171 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~ 171 (566)
++.++||+|++|++| +++.
T Consensus 194 ~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 194 LVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHHHhcCEEEEEcCc-Eeec
Confidence 999999999999986 4443
No 487
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1e-31 Score=272.76 Aligned_cols=177 Identities=23% Similarity=0.326 Sum_probs=148.9
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-------cccccceeEEcCCC--CCCCCCCHHHHHHHHHHhcCCChhhHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-------DKNLSYIGYCPQFD--ALNDRLTPREHLEFYSRVRNVPSVLLN 68 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-------~~~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~~~~~~~~~ 68 (566)
.||||++|+++|++.|.+ .+.+..... ......|+|+||++ .+++ .||.||+.+.....+.+..+..
T Consensus 44 sGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~~~~~~~~~ 122 (280)
T PRK13649 44 SGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNFGVSQEEAE 122 (280)
T ss_pred CCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHcCCCHHHHH
Confidence 599999999999987654 122221110 11234699999997 3454 6999999887655555555566
Q ss_pred HHHHHHHHHcCCC-cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEec
Q psy7366 69 TIVNESLNKFALG-HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTS 147 (566)
Q Consensus 69 ~~~~~~l~~~gl~-~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiis 147 (566)
+++.++++.+||. ...++++.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++|+|||++|
T Consensus 123 ~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivs 202 (280)
T PRK13649 123 ALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVT 202 (280)
T ss_pred HHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 7788999999997 467999999999999999999999999999999999999999999999999999977799999999
Q ss_pred CChhHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 148 HNMEECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 148 H~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
|+++++..+||+|++|++|+++..|+++++.
T Consensus 203 H~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 203 HLMDDVANYADFVYVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred ccHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999988764
No 488
>PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). On the basis of sequence similarities a family of related ATP-binding proteins has been characterised [, , , , ]. The proteins belonging to this family also contain one or two copies of the 'A' consensus sequence [] or the 'P-loop' [] (see IPR001687 from INTERPRO).; GO: 0005524 ATP binding, 0016887 ATPase activity; PDB: 3NHB_A 3NH9_A 3NHA_A 3NH6_A 1VCI_A 1V43_A 2YZ2_B 2PMK_A 2FFA_A 1XEF_D ....
Probab=99.98 E-value=2.4e-32 Score=247.21 Aligned_cols=132 Identities=39% Similarity=0.641 Sum_probs=118.2
Q ss_pred eeeeeEEEeCCcEEEEEcCCCCcHHHHHHHHHCCCCCCccEEEEcCccCCC-chHHhcCceEEEecCCCCCCCCCHHHHH
Q psy7366 362 VNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRD-SMDLVRSYIGYCPQFDALNDRLTPREHL 440 (566)
Q Consensus 362 l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i~~v~q~~~l~~~~tv~e~l 440 (566)
|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|.++.. .....++.++|++|++.+++.+|+.+|
T Consensus 1 L~~v~~~i~~g~~~~i~G~nGsGKStLl~~l~g~~~~~~G~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~tv~~~- 79 (137)
T PF00005_consen 1 LKNVSLEIKPGEIVAIVGPNGSGKSTLLKALAGLLPPDSGSILINGKDISDIDIEELRRRIGYVPQDPQLFPGLTVREN- 79 (137)
T ss_dssp EEEEEEEEETTSEEEEEESTTSSHHHHHHHHTTSSHESEEEEEETTEEGTTSHHHHHHHTEEEEESSHCHHTTSBHHHH-
T ss_pred CCceEEEEcCCCEEEEEccCCCccccceeeecccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 689999999999999999999999999999999999999999999999876 445667899999999999999999998
Q ss_pred HHHHHhcCCCchHHHHHHHHHHHHcCCCCccccCc----CcCChhHHHHHHHHHHHcCCCCEEEEeCCCC
Q psy7366 441 EFYSRVRNVPSVLLNTIVNESLNKFALGHYSDREV----RTLSGGNKRKLSTAIALLGNPPLIFLDEPTS 506 (566)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----~~LSgGqkqrv~la~al~~~p~lllLDEPt~ 506 (566)
.....+.++++.+++.+..++.+ .+||+|||||++||+||+.+|++||||||||
T Consensus 80 ------------~~~~~~~~~l~~l~~~~~~~~~~~~~~~~LS~Ge~~rl~la~al~~~~~llllDEPt~ 137 (137)
T PF00005_consen 80 ------------ESDERIEEVLKKLGLEDLLDRKIGQRASSLSGGEKQRLALARALLKNPKLLLLDEPTN 137 (137)
T ss_dssp ------------HHHHHHHHHHHHTTHGGGTGSBGTSCGGGSCHHHHHHHHHHHHHHTTSSEEEEESTTT
T ss_pred ------------cccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 22345778888888766555555 9999999999999999999999999999997
No 489
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.2e-31 Score=276.98 Aligned_cols=180 Identities=18% Similarity=0.198 Sum_probs=149.7
Q ss_pred CCcchHHHHHhccccC------CC-ccCCCCCcc---cc----cccceeEEcCCC--CCCCCCCHHHHHHHHHHhc-CCC
Q psy7366 1 MGLTTTPKRVVTLLLT------TQ-KVPGSNPTI---DK----NLSYIGYCPQFD--ALNDRLTPREHLEFYSRVR-NVP 63 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~------~~-~~~~~~~~~---~~----~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~-~~~ 63 (566)
.||||++|+++|++-+ |+ .+.+.+... .. ....|+||||++ .+++.+|+.+++....... +.+
T Consensus 44 sGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~ 123 (326)
T PRK11022 44 SGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGN 123 (326)
T ss_pred ChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCC
Confidence 5999999999999853 11 122221110 00 123699999998 4778899999887654432 455
Q ss_pred hhhHHHHHHHHHHHcCCCc---ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHh-C
Q psy7366 64 SVLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVS-E 139 (566)
Q Consensus 64 ~~~~~~~~~~~l~~~gl~~---~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~-~ 139 (566)
..+..+++.++++.+||.. .+++++.+|||||+|||+||+||+.+|+|||+||||++||+.++.++.++|+++++ .
T Consensus 124 ~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~ 203 (326)
T PRK11022 124 KKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE 203 (326)
T ss_pred HHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5667788999999999974 46889999999999999999999999999999999999999999999999999976 5
Q ss_pred CCEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 140 GRCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 140 g~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
|.|+|+||||++++.++||||++|++|+|++.|+++++...
T Consensus 204 g~til~iTHdl~~~~~~adri~vm~~G~ive~g~~~~~~~~ 244 (326)
T PRK11022 204 NMALVLITHDLALVAEAAHKIIVMYAGQVVETGKAHDIFRA 244 (326)
T ss_pred CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhhC
Confidence 99999999999999999999999999999999999988653
No 490
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=99.98 E-value=1.4e-31 Score=263.86 Aligned_cols=179 Identities=21% Similarity=0.214 Sum_probs=148.6
Q ss_pred CCcchHHHHHhccccC----CC---ccCCCCCccc-ccccceeEEcCCCC--CCCCCCHHHHHHHHHHhcCCChhhHHHH
Q psy7366 1 MGLTTTPKRVVTLLLT----TQ---KVPGSNPTID-KNLSYIGYCPQFDA--LNDRLTPREHLEFYSRVRNVPSVLLNTI 70 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~----~~---~~~~~~~~~~-~~~~~ig~v~Q~~~--l~~~~tv~e~l~~~~~~~~~~~~~~~~~ 70 (566)
.||||++|+++|++.+ .. .+.+...... .....|+|++|++. +++.+|+.+++.+.....+.......++
T Consensus 23 sGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T TIGR02770 23 SGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFTMGNHAIETLRSLGKLSKQARAL 102 (230)
T ss_pred CCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccCHHHHHHHHHHHcCccHHHHHHH
Confidence 5999999999999976 22 1333221111 11247999999985 4567899999977654443333445667
Q ss_pred HHHHHHHcCCC---cccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEe
Q psy7366 71 VNESLNKFALG---HYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILT 146 (566)
Q Consensus 71 ~~~~l~~~gl~---~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviii 146 (566)
+.++++.+|++ ...++++.+||||||||++||+||+.+|+||||||||++||+.+++.+.++|++++++ |+|||++
T Consensus 103 ~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~ 182 (230)
T TIGR02770 103 ILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLI 182 (230)
T ss_pred HHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 89999999998 4678999999999999999999999999999999999999999999999999998764 8999999
Q ss_pred cCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 147 SHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 147 sH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
||+++++..+||||++|++|+++..|+++++..
T Consensus 183 sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 215 (230)
T TIGR02770 183 THDLGVVARIADEVAVMDDGRIVERGTVKEIFY 215 (230)
T ss_pred eCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999999999999888753
No 491
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.98 E-value=1.5e-31 Score=264.53 Aligned_cols=179 Identities=26% Similarity=0.386 Sum_probs=153.5
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|++.|++.+... +.+..... ......++|++|++.+++.+|+.||+.+.....+.+..+..+++.++++
T Consensus 36 ~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~ 115 (235)
T cd03299 36 SGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAE 115 (235)
T ss_pred CCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 5999999999999876552 33322111 1123579999999999989999999987655544555566678889999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+|+....++.+.+|||||+||++||+||+.+|++|||||||++||+.++++++++|+++..+ |.|||++||+++++.+
T Consensus 116 ~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~ 195 (235)
T cd03299 116 MLGIDHLLNRKPETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWA 195 (235)
T ss_pred HcCChhHHhcCcccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHH
Confidence 999998899999999999999999999999999999999999999999999999999998665 9999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+||||++|++|+++..|+++++..
T Consensus 196 ~~d~i~~l~~G~i~~~~~~~~~~~ 219 (235)
T cd03299 196 LADKVAIMLNGKLIQVGKPEEVFK 219 (235)
T ss_pred hCCEEEEEECCEEEEecCHHHHHh
Confidence 999999999999999998877643
No 492
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=99.98 E-value=6.4e-32 Score=263.20 Aligned_cols=168 Identities=23% Similarity=0.294 Sum_probs=142.8
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCc----c-cccccceeEEcCCCCCCCCCCHHHHHHHHHH-hcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPT----I-DKNLSYIGYCPQFDALNDRLTPREHLEFYSR-VRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~----~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~-~~~~~~~~~~~~~ 71 (566)
.||||++|+++|++.+.. .+.+.... . ......|+|+||++.+++.+|+.||+.++.. ..+.+..+..+++
T Consensus 37 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~ 116 (213)
T cd03262 37 SGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERA 116 (213)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHH
Confidence 599999999999986544 12222111 0 1123579999999999999999999987642 2344445566788
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++++.+|++...++++.+|||||+||++||+||+.+|++|||||||++||+.+++++.++|+++++.|+|||++||+++
T Consensus 117 ~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~ 196 (213)
T cd03262 117 LELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG 196 (213)
T ss_pred HHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 99999999998889999999999999999999999999999999999999999999999999999777999999999999
Q ss_pred HHHhhcCEEEEEeCCEE
Q psy7366 152 ECEALCTKLTIMVNGQF 168 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i 168 (566)
++.++||+|++|++|++
T Consensus 197 ~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 197 FAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhCCEEEEEeCCcC
Confidence 99999999999999974
No 493
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.3e-31 Score=270.66 Aligned_cols=179 Identities=23% Similarity=0.296 Sum_probs=150.6
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCc--c---cccccceeEEcCCCCC-CCCCCHHHHHHHHHHhcCCChhhHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPT--I---DKNLSYIGYCPQFDAL-NDRLTPREHLEFYSRVRNVPSVLLNTIV 71 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~--~---~~~~~~ig~v~Q~~~l-~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 71 (566)
.||||++|++.|++.+.+. +.+.... . ......|||+||++.+ +...|+.+|+.+.....+.+..+..+++
T Consensus 38 sGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 117 (271)
T PRK13638 38 CGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRV 117 (271)
T ss_pred CCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5999999999999876541 2232211 0 1123569999999864 3456899999886555555555566778
Q ss_pred HHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCChh
Q psy7366 72 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHNME 151 (566)
Q Consensus 72 ~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~~~ 151 (566)
.++++.+|+....++++.+||||||||++||+||+.+|++|||||||++||+.++.++.++|++++++|.|||++||+++
T Consensus 118 ~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~ 197 (271)
T PRK13638 118 DEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID 197 (271)
T ss_pred HHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 89999999988889999999999999999999999999999999999999999999999999999777999999999999
Q ss_pred HHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 152 ECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 152 ~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
++.++||+|++|++|+++..|+++++..
T Consensus 198 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 198 LIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999887643
No 494
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=99.98 E-value=1.7e-31 Score=265.44 Aligned_cols=177 Identities=24% Similarity=0.251 Sum_probs=148.6
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCccc----ccccceeEEcCCCCCCCCCCHHHHHHHHHHhc--------CCChh
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTID----KNLSYIGYCPQFDALNDRLTPREHLEFYSRVR--------NVPSV 65 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~~----~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~--------~~~~~ 65 (566)
.||||++|++.|++.+.. .+.+...... .....|+|++|++.+++.+||.||+.+..... +....
T Consensus 39 sGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~ 118 (242)
T TIGR03411 39 AGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSA 118 (242)
T ss_pred CCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHH
Confidence 599999999999987654 2222221111 11246999999999999999999998764311 11223
Q ss_pred hHHHHHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q psy7366 66 LLNTIVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVIL 145 (566)
Q Consensus 66 ~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii 145 (566)
...+++.++++.+|++...++.+.+|||||+||++||+||+.+|++|||||||++||+.++++++++|+++++ ++|||+
T Consensus 119 ~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~ 197 (242)
T TIGR03411 119 EEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVV 197 (242)
T ss_pred HHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEE
Confidence 4556789999999999888999999999999999999999999999999999999999999999999999865 789999
Q ss_pred ecCChhHHHhhcCEEEEEeCCEEEEecChhHHH
Q psy7366 146 TSHNMEECEALCTKLTIMVNGQFTCLGSATHLK 178 (566)
Q Consensus 146 isH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~ 178 (566)
+||+++++.++||||++|++|+++..|+++++.
T Consensus 198 ~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 198 VEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred EECCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 999999999999999999999999999888764
No 495
>KOG0063|consensus
Probab=99.98 E-value=1.1e-30 Score=263.19 Aligned_cols=328 Identities=24% Similarity=0.358 Sum_probs=236.7
Q ss_pred HHHHHHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEecCC
Q psy7366 70 IVNESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRCVILTSHN 149 (566)
Q Consensus 70 ~~~~~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiisH~ 149 (566)
...++.+.+.|+..++|.+.+||||+-||.+||++.+.+.++.++|||.+.||...+...-..|+.+..-..-||+|.||
T Consensus 193 ~~~~~~~~~~L~~~~~re~~~lsggelqrfaia~~~vq~advyMFDEpSsYLDVKQRLkaA~~IRsl~~p~~YiIVVEHD 272 (592)
T KOG0063|consen 193 NKEEVCDQLDLNNLLDREVEQLSGGELQRFAIAMVCVQKADVYMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHD 272 (592)
T ss_pred cHHHHHHHHHHhhHHHhhhhhcccchhhhhhhhhhhhhhcceeEecCCcccchHHHhhhHHHHHHHhhCCCCeEEEEEee
Confidence 45677788888888999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred hhHHHhhcCEEEEEeC-----CEEEEecChhHHHhhccCccccCCCCCCCCccchhHHHhhccCCCCccccCCCcccccc
Q psy7366 150 MEECEALCTKLTIMVN-----GQFTCLGSATHLKSKSMALPVSGNDLGRGDPVRSELSRALNDGSGSGIRNSARPEVSGF 224 (566)
Q Consensus 150 ~~~~~~~~d~i~vl~~-----G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (566)
++.++-+.|-|..+.. |.++.--+..+. .+.|
T Consensus 273 LsVLDylSDFiCcLYGvp~aYGVVT~Pfsvr~g-------------------------------------------iniF 309 (592)
T KOG0063|consen 273 LSVLDYLSDFICCLYGVPSAYGVVTMPFSVREG-------------------------------------------INIF 309 (592)
T ss_pred chHHHhhhcceeEEecCCccceEEEeccchhhh-------------------------------------------hhhh
Confidence 9999999999999873 222211111000 0000
Q ss_pred cccccCCccchhhhhhhHHHHHHHHHHHHhhhhheeeccCCeeeeeeccchhhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7366 225 YNENIDGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNGTRLVAVNIWAWRIIGKNLTCMACHGALYSAINLSIEYKV 304 (566)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (566)
+...- .+. ..-|+. . +..++
T Consensus 310 l~g~i------------------------------pte----------n~rfR~--~-----------------~l~f~- 329 (592)
T KOG0063|consen 310 LDGLI------------------------------PTE----------NLRFRP--E-----------------CLVFL- 329 (592)
T ss_pred hhccC------------------------------Ccc----------cccccc--h-----------------hheee-
Confidence 00000 000 000000 0 00000
Q ss_pred HhhhhcccccCCCCCCCcchhHHHHHHhhhcCCCCCCeEEEeeeEEEeCCcCCCcceeeeeeEEEeCC-----cEEEEEc
Q psy7366 305 FSRCFTRSNLHPVPVSLEEDDVRKERERVEHGADSGDVLVVKRLFKIYANSKGTKPAVNQISFGVGRG-----ECFGLLG 379 (566)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~~~~l~~isl~i~~G-----e~~~l~G 379 (566)
.......+ + . --.++|+ +.+.-+.++.|.|..| |++..+|
T Consensus 330 -------------~~~~~~~e-k-~-----------------~~~y~Yp---~m~k~~g~F~L~i~~GefsdSeiivmlg 374 (592)
T KOG0063|consen 330 -------------ASDLSSED-R-R-----------------TGRYSYP---KMKKTVGDFCLCIKVGEFSDSEIIVMLG 374 (592)
T ss_pred -------------eccccchh-h-h-----------------hheeccC---cceeeeeeEEEEEeecccCCceeEEEEc
Confidence 00000000 0 0 0012343 2344567788888877 5789999
Q ss_pred CCCCcHHHHHHHHHCCCCCCccE-EEEcCccCCCchHHhcCceEEEecCCCCCCCCCHHHHHHHHHHhcCCCchHHHHHH
Q psy7366 380 LNGAGKTTTFKMLTGAIKPTSGN-AYVMNHSIRDSMDLVRSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIV 458 (566)
Q Consensus 380 ~NGsGKSTLl~~i~G~~~~~~G~-i~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 458 (566)
.||.|||||+++++|.++|+.|. |-. -.++|=||...--..-||++.+.- .++. .....+.+
T Consensus 375 EngtgkTTfi~mlag~~~pd~~~e~p~-------------lnVSykpqkispK~~~tvR~ll~~--kIr~--ay~~pqF~ 437 (592)
T KOG0063|consen 375 ENGTGKTTFIRMLAGRLKPDEGGEIPV-------------LNVSYKPQKISPKREGTVRQLLHT--KIRD--AYMHPQFV 437 (592)
T ss_pred cCCcchhHHHHHHhcCCCCCccCcccc-------------cceeccccccCccccchHHHHHHH--HhHh--hhcCHHHH
Confidence 99999999999999999999762 211 147888887543344588775432 1111 11112346
Q ss_pred HHHHHHcCCCCccccCcCcCChhHHHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCcEEEEEccCH
Q psy7366 459 NESLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAV-SEGRCVILTSHNM 537 (566)
Q Consensus 459 ~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~-~~g~tvl~vsHd~ 537 (566)
.+.++-+.+++..++.+.+|||||+|||++|.+|-..+++++.|||.+-||.+.+..--..+++.. ..++|-.+|.||+
T Consensus 438 ~dvmkpL~ie~i~dqevq~lSggelQRval~KOGGKpAdvYliDEpsAylDSeQRi~AskvikRfilhakktafvVEhdf 517 (592)
T KOG0063|consen 438 NDVMKPLQIENIIDQEVQGLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRIIASKVIKRFILHAKKTAFVVEHDF 517 (592)
T ss_pred HhhhhhhhHHHHHhHHhhcCCchhhHHHHHHHhcCCCCceEEecCchhhcChHHHHHHHHHHHHHHHhccchhhhhhhHH
Confidence 677888888888999999999999999999999999999999999999999999999888888864 5588999999999
Q ss_pred HHHHhhCCEEEEEEC
Q psy7366 538 EECEALCTKLTIMVN 552 (566)
Q Consensus 538 ~~~~~~~drv~~l~~ 552 (566)
-.+.-++||+++...
T Consensus 518 ImaTYladrvivf~G 532 (592)
T KOG0063|consen 518 IMATYLADRVIVFEG 532 (592)
T ss_pred HHHHhhcceeEEEec
Confidence 998889999998753
No 496
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=99.98 E-value=1.5e-31 Score=260.69 Aligned_cols=173 Identities=20% Similarity=0.313 Sum_probs=144.0
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+++|++.+.+. +.+..... ......++|+||++.+++.+|+.||+.+.............+++.++++
T Consensus 35 sGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~ 114 (213)
T TIGR01277 35 AGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQ 114 (213)
T ss_pred CCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHH
Confidence 5999999999999876552 22221111 1223569999999999999999999986532211112234567889999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+|++...++.+.+||||||||++||+||+.+|++|||||||++||+.+++.+.++|++++++ |.|||++||+++++.+
T Consensus 115 ~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~ 194 (213)
T TIGR01277 115 QVGIADYLDRLPEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARA 194 (213)
T ss_pred HcCcHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHh
Confidence 999988889999999999999999999999999999999999999999999999999998764 8999999999999999
Q ss_pred hcCEEEEEeCCEEEEecC
Q psy7366 156 LCTKLTIMVNGQFTCLGS 173 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~ 173 (566)
+||++++|++|+++..|+
T Consensus 195 ~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 195 IASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCeEEEEECCeEEEecC
Confidence 999999999999998764
No 497
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=99.98 E-value=1.4e-31 Score=264.29 Aligned_cols=179 Identities=19% Similarity=0.295 Sum_probs=149.1
Q ss_pred CCcchHHHHHhccccCCC---ccCCCCCcc-cccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCCChhhHHHHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQ---KVPGSNPTI-DKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNVPSVLLNTIVNESLN 76 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~---~~~~~~~~~-~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 76 (566)
.||||++|+++|++.+.. .+.+..... ......++|+||++.+++.+|+.||+.+.............+++.++++
T Consensus 36 sGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~ 115 (232)
T PRK10771 36 AGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIAR 115 (232)
T ss_pred CCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHH
Confidence 599999999999987654 133322111 1123569999999999999999999976532110112234567899999
Q ss_pred HcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhHHHh
Q psy7366 77 KFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEECEA 155 (566)
Q Consensus 77 ~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~~~~ 155 (566)
.+|++...++++.+||||||||++||+|++.+|++|||||||++||+.+++.+.++|+++.++ |.|||++||+++++.+
T Consensus 116 ~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~ 195 (232)
T PRK10771 116 QMGIEDLLARLPGQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAAR 195 (232)
T ss_pred HcCcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHH
Confidence 999998899999999999999999999999999999999999999999999999999998654 8999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHHh
Q psy7366 156 LCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 156 ~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+||||++|++|+++..|+++++..
T Consensus 196 ~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 196 IAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred hCCEEEEEECCEEEEeCCHHHHHh
Confidence 999999999999999999887654
No 498
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=99.98 E-value=1.7e-31 Score=267.29 Aligned_cols=177 Identities=24% Similarity=0.272 Sum_probs=147.3
Q ss_pred CCcchHHHHHhccccC-------CC-ccCCCCCc-----ccccccceeEEcCCCCCCCCCCHHHHHHHHHHhcCC-Chhh
Q psy7366 1 MGLTTTPKRVVTLLLT-------TQ-KVPGSNPT-----IDKNLSYIGYCPQFDALNDRLTPREHLEFYSRVRNV-PSVL 66 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~-------~~-~~~~~~~~-----~~~~~~~ig~v~Q~~~l~~~~tv~e~l~~~~~~~~~-~~~~ 66 (566)
.||||++|+++|++.+ |+ .+.+.... .......|||++|++.++. +||+||+.+.....+. +...
T Consensus 44 sGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~ 122 (254)
T PRK14273 44 CGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTKDKKK 122 (254)
T ss_pred CCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCCCCHHH
Confidence 5999999999999875 33 12222111 0122457999999998885 8999999887654432 3344
Q ss_pred HHHHHHHHHHHcCC----CcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhCCCE
Q psy7366 67 LNTIVNESLNKFAL----GHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSEGRC 142 (566)
Q Consensus 67 ~~~~~~~~l~~~gl----~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~t 142 (566)
..+++.++++.+|+ ....++++.+||||||||++||+||+.+|++|||||||++||+.++.++.++|++++ ++.|
T Consensus 123 ~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~t 201 (254)
T PRK14273 123 LDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYT 201 (254)
T ss_pred HHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCE
Confidence 56778899999987 345688999999999999999999999999999999999999999999999999985 4799
Q ss_pred EEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 143 VILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 143 viiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
||++||+++++.++||||++|++|+++..|+++++..
T Consensus 202 vii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 238 (254)
T PRK14273 202 IIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFF 238 (254)
T ss_pred EEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999999888754
No 499
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=99.97 E-value=1.4e-31 Score=271.24 Aligned_cols=178 Identities=24% Similarity=0.312 Sum_probs=152.3
Q ss_pred CCcchHHHHHhccccCCCc---cCCCCCcc---cccccceeEEcCCCC-CCCCCCHHHHHHHHHHhcCCChhhHHHHHHH
Q psy7366 1 MGLTTTPKRVVTLLLTTQK---VPGSNPTI---DKNLSYIGYCPQFDA-LNDRLTPREHLEFYSRVRNVPSVLLNTIVNE 73 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~~~---~~~~~~~~---~~~~~~ig~v~Q~~~-l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ 73 (566)
.||||++|+++|++.+... +.+..... ......|||+||++. ++...||.||+.+.....+.+..+..+++.+
T Consensus 44 aGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ 123 (279)
T PRK13635 44 SGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQ 123 (279)
T ss_pred CcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHH
Confidence 5999999999999976652 33322111 122357999999984 6677899999988765555566666778999
Q ss_pred HHHHcCCCcccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEecCChhH
Q psy7366 74 SLNKFALGHYSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-GRCVILTSHNMEE 152 (566)
Q Consensus 74 ~l~~~gl~~~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g~tviiisH~~~~ 152 (566)
+++.+||+...++.+.+||||||||++||+||+.+|++|||||||++||+.++.+++++|++++++ |.|||++||++++
T Consensus 124 ~l~~~gL~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~ 203 (279)
T PRK13635 124 ALRQVGMEDFLNREPHRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE 203 (279)
T ss_pred HHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH
Confidence 999999998899999999999999999999999999999999999999999999999999999765 8999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecChhHHHh
Q psy7366 153 CEALCTKLTIMVNGQFTCLGSATHLKS 179 (566)
Q Consensus 153 ~~~~~d~i~vl~~G~i~~~g~~~~~~~ 179 (566)
+.. ||||++|++|++++.|+++++..
T Consensus 204 ~~~-~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 204 AAQ-ADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHc-CCEEEEEECCEEEEECCHHHHhc
Confidence 975 99999999999999999887654
No 500
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=99.97 E-value=2.1e-31 Score=275.51 Aligned_cols=180 Identities=20% Similarity=0.258 Sum_probs=150.7
Q ss_pred CCcchHHHHHhccccCC-----C-ccCCCCCcc---cc----cccceeEEcCCC--CCCCCCCHHHHHHHHHHhc-CCCh
Q psy7366 1 MGLTTTPKRVVTLLLTT-----Q-KVPGSNPTI---DK----NLSYIGYCPQFD--ALNDRLTPREHLEFYSRVR-NVPS 64 (566)
Q Consensus 1 ~Gktt~~k~~~~~~~~~-----~-~~~~~~~~~---~~----~~~~ig~v~Q~~--~l~~~~tv~e~l~~~~~~~-~~~~ 64 (566)
.||||++|+++|++-++ + .+.+.+... .. +...|+||||++ .+++.+|+.+++.+..... +.+.
T Consensus 53 sGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~ 132 (330)
T PRK09473 53 SGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSK 132 (330)
T ss_pred chHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCH
Confidence 59999999999999763 2 122221110 10 124699999998 6788999999997655443 3555
Q ss_pred hhHHHHHHHHHHHcCCCc---ccccccccCChhHHHHHHHHHHHhCCCCEEEeeCCCCCCCHHHHHHHHHHHHHHHhC-C
Q psy7366 65 VLLNTIVNESLNKFALGH---YSDREVRTLSGGNKRKLSTAIALLGNPPLIFLDEPTSGMDPGARRFLWTCIERAVSE-G 140 (566)
Q Consensus 65 ~~~~~~~~~~l~~~gl~~---~~~~~~~~LSgG~kqrl~iA~al~~~p~vLlLDEPt~~LD~~~~~~l~~~l~~l~~~-g 140 (566)
.+..+++.++++.+||+. ..++++.+|||||+||++||+||+.+|++||+||||++||+.++.++.++|++++++ |
T Consensus 133 ~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g 212 (330)
T PRK09473 133 AEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFN 212 (330)
T ss_pred HHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcC
Confidence 666778999999999975 247799999999999999999999999999999999999999999999999999765 9
Q ss_pred CEEEEecCChhHHHhhcCEEEEEeCCEEEEecChhHHHhh
Q psy7366 141 RCVILTSHNMEECEALCTKLTIMVNGQFTCLGSATHLKSK 180 (566)
Q Consensus 141 ~tviiisH~~~~~~~~~d~i~vl~~G~i~~~g~~~~~~~~ 180 (566)
.|+|+||||++++..+||||+||++|+|++.|+++++...
T Consensus 213 ~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~~i~~~ 252 (330)
T PRK09473 213 TAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQ 252 (330)
T ss_pred CEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999998654
Done!