RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7367
(251 letters)
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 181 bits (461), Expect = 1e-57
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
++NL+KRF N AVN LN+ + + LG +G GKTTT+ M+ G+ + G +
Sbjct: 9 LENLTKRFGN-FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGD 67
Query: 63 HDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGI 122
D T + R++ + Q A++ +TV E++ F ++K+ PKD + L I
Sbjct: 68 RD-VTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELLQI 126
Query: 123 PHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELL--IKYKK 180
LSGG +++++VA A + +++DEP S +D R ++ + ++ K
Sbjct: 127 EELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKL 186
Query: 181 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
T I TH EA +GDRIA++ G+L GS
Sbjct: 187 KVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGS 220
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 179 bits (454), Expect = 1e-56
Identities = 61/222 (27%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
+++L KR K + G++ E +I +G NGAGKTTT+ ++ ++ SSG ++
Sbjct: 5 VKDLRKRI-GKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFG 63
Query: 63 HDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGI 122
++ + +R+ + P+ + + E++ F + + + G+
Sbjct: 64 KNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAGL 123
Query: 123 PHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELLIKYKK-G 181
K +T S GM RKL +A A + R ILDEPTSG+D + R + ++L + + G
Sbjct: 124 GEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEG 183
Query: 182 RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLKNSFA 223
T+++++H M E + L DRIA+I G + G+ LK +
Sbjct: 184 LTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYK 225
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 163 bits (415), Expect = 1e-50
Identities = 61/221 (27%), Positives = 116/221 (52%), Gaps = 9/221 (4%)
Query: 3 IQNLSKRFPNGKL---AVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAK 59
+ N++K F G A+N ++++ QI +G +GAGK+T I + + + G+
Sbjct: 4 LSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVL 63
Query: 60 IYNHDI----RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISN 115
+ ++ +++T RR +G+ Q+ L TV ++ +L PKD + ++
Sbjct: 64 VDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTE 123
Query: 116 MIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELL 175
++ +G+ K S + LSGG ++++++A A + ++ DE TS +DP + RSI ELL
Sbjct: 124 LLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELL 183
Query: 176 IKYKK--GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
+ G T++L TH MD + D +A+I+ G+L +
Sbjct: 184 KDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDT 224
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 158 bits (401), Expect = 2e-48
Identities = 50/229 (21%), Positives = 105/229 (45%), Gaps = 18/229 (7%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
+ +L KR+ G + G+++ + S +G +G+GK+T + + + S G +
Sbjct: 5 VIDLHKRY-GGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNG 63
Query: 63 HDI--------------RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYS-QLKQVPKD 107
+I + + +R L + Q+ L+ +TV E++ Q+ + K
Sbjct: 64 QNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKH 123
Query: 108 LAQLEISNMIVDLGIPHK-RTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPY 166
A+ + +GI + + LSGG Q+++S+A A ++ DEPTS +DP
Sbjct: 124 DARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPE 183
Query: 167 SRRSIWELLIKY-KKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
+ ++ + ++G+T+++ TH M A + + + GK++ G
Sbjct: 184 LVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGD 232
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 155 bits (394), Expect = 1e-47
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 5/230 (2%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
+Q+L + A+ G+++ QI + +G NGAGKTTT+S + G++ G
Sbjct: 9 VQSLHVYY-GAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNG 67
Query: 63 HDIRTDMTTIR--RSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDL 120
DI + + + P+ +F +LTV E++ + ++ + + + +
Sbjct: 68 QDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFP 127
Query: 121 GIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELLIKYKK 180
+ + L TLSGG Q+ L++ A + + +++DEP+ G+ P ++E++ K +
Sbjct: 128 RLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQ 187
Query: 181 -GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS-SVFLKNSFARGYYL 228
G T++L A + ++ G++ G S L N R YL
Sbjct: 188 EGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYL 237
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 153 bits (388), Expect = 1e-46
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 17/228 (7%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
+N+ K F A++G++++ + +T +G NG+GK+T I+++ G L G N
Sbjct: 7 TENIVKYF-GEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFEN 65
Query: 63 HDIRTDMTTIRRSLGVC--PQYNALFDKLTVEEHMWFYSQL------------KQVPKDL 108
DI G+ Q ++TV E++ K +PK+
Sbjct: 66 KDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEE 125
Query: 109 AQLEISNMIVD-LGIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYS 167
+E + I++ L + H A LSGG + + + A + + +++DEP +GV P
Sbjct: 126 EMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGL 185
Query: 168 RRSIWELLIKYK-KGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
I+ +++ K KG T ++ H +D D + ++ G++ G
Sbjct: 186 AHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGR 233
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 147 bits (372), Expect = 2e-44
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 10/224 (4%)
Query: 1 MA---IQNLSKRFPNGKL-AVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSG 56
M ++N+SK F GK+ A++ +N+N + LG +GAGKTT + ++ G+ S+G
Sbjct: 1 MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTG 60
Query: 57 TAKIYNHDI----RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLE 112
+ + + + R +G+ Q AL+ LT E++ F ++ K+ +
Sbjct: 61 ELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKR 120
Query: 113 ISNMIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIW 172
+ + L I H LSG Q+++++A A + ++LDEP S +D R S
Sbjct: 121 VEEVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSAR 180
Query: 173 ELL--IKYKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
L+ ++ + G T+++ +H + + DR+ ++ GKL G
Sbjct: 181 ALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGK 224
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 146 bits (370), Expect = 3e-44
Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 8/214 (3%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
I++LS+++ +++ L++ + LG GAGKT + ++ G SG +
Sbjct: 4 IESLSRKW--KNFSLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDG 61
Query: 63 HDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGI 122
D TD++ + + Q +LF + V++++ F ++K++ L+ DL I
Sbjct: 62 KD-VTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLD---TARDLKI 117
Query: 123 PHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELL--IKYKK 180
H TLSGG Q+++++A A + + ++LDEP S +DP ++ + E+L + K
Sbjct: 118 EHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENAREMLSVLHKKN 177
Query: 181 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
TV+ TH EA ++ DRIA++ GKL G
Sbjct: 178 KLTVLHITHDQTEARIMADRIAVVMDGKLIQVGK 211
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 146 bits (370), Expect = 3e-44
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 4/214 (1%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
+QN++K + + +N++ +E + F+G +G GK+T + M+ G+ ++SG I
Sbjct: 3 LQNVTKAW-GEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGE 61
Query: 63 HDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGI 122
D R +G+ Q AL+ L+V E+M F +L K++ ++ + L +
Sbjct: 62 KR-MNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQL 120
Query: 123 PHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELL--IKYKK 180
H LSGG ++++++ + +LDEP S +D R + + + +
Sbjct: 121 AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL 180
Query: 181 GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
GRT+I TH EA L D+I ++ AG++ G
Sbjct: 181 GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGK 214
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 146 bits (369), Expect = 6e-44
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 1 MA---IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGT 57
MA + ++ K F AV +++ + + LG +G GKTTT+ M+ G+ S G
Sbjct: 1 MAGVRLVDVWKVF-GEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQ 59
Query: 58 AKIYNHDI-----RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLE 112
I + + + R + + Q AL+ +TV +++ F +L++VP+
Sbjct: 60 IYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQR 119
Query: 113 ISNMIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIW 172
+ + LG+ LSGG ++++++ A + + ++DEP S +D R +
Sbjct: 120 VREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMR 179
Query: 173 ELL--IKYKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
L ++ + G T I TH EA +GDRIA++ G LQ GS
Sbjct: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGS 223
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 141 bits (357), Expect = 4e-42
Identities = 49/222 (22%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 3 IQNLSKRFPNGK---LAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAK 59
++N++K + G+ A+ +N+N E + S +G +G+GK+T ++++ + + G
Sbjct: 4 LKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVY 63
Query: 60 IYNHDI-----RTDMTTIRRSLGVCPQYNALFDKLTVEEHMWF---YSQLKQVPKDLAQL 111
I N R +G Q L LT E++ + + + +
Sbjct: 64 IDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRK 123
Query: 112 EISNMIVDLGIPHK-RTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRS 170
+ + + N LSGG Q+++++A A ++ D+PT +D +
Sbjct: 124 RALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEK 183
Query: 171 IWELLIKYKK--GRTVILTTHYMDEADLLGDRIAIIAAGKLQ 210
I +LL K + G+TV++ TH ++ A G+RI + G+++
Sbjct: 184 IMQLLKKLNEEDGKTVVVVTHDINVAR-FGERIIYLKDGEVE 224
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 136 bits (344), Expect = 1e-40
Identities = 37/204 (18%), Positives = 86/204 (42%), Gaps = 15/204 (7%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
I++LS + K + + + + + +F G NG GKTT + + L G
Sbjct: 5 IRDLSVGY--DKPVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNG 62
Query: 63 HDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGI 122
+T ++ + P+ + K++VE+++ + L V + ++ + V++
Sbjct: 63 VP----ITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVEVLD 118
Query: 123 PHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELLIKY--KK 180
K+ LS G R++ +A + + +LD+P +D S+ + + +++ +K
Sbjct: 119 LKKK---LGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEK 175
Query: 181 GRTVILTTHYMDEADLLGDRIAII 204
G +I + + D +
Sbjct: 176 GIVIISSREELSYC----DVNENL 195
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 137 bits (347), Expect = 2e-40
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 9/219 (4%)
Query: 3 IQNLSKRFPNG-KLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIY 61
I ++S ++ + + +N++ + + +F+G +G GK+T I+++ V+SG I
Sbjct: 19 IDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILID 78
Query: 62 NHDIRT-DMTTIRRSLGVCPQYNALFDKLTVEEHMWF---YSQLKQVPKDLAQLEISNMI 117
H+I+ ++R +G+ Q N LF TV+E++ + ++V + + I
Sbjct: 79 GHNIKDFLTGSLRNQIGLVQQDNILFS-DTVKENILLGRPTATDEEVVEAAKMANAHDFI 137
Query: 118 VDL--GIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELL 175
++L G + LSGG +++LS+A F+ +ILDE TS +D S I E L
Sbjct: 138 MNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEAL 197
Query: 176 IKYKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
K RT ++ H + D+I +I G + G+
Sbjct: 198 DVLSKDRTTLIVAHRLSTI-THADKIVVIENGHIVETGT 235
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 134 bits (339), Expect = 2e-39
Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 7/218 (3%)
Query: 3 IQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN 62
+++ + + + + ++ + I +F G +G GK+T S+L ++G I
Sbjct: 4 ARHVDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDG 63
Query: 63 HDIRT-DMTTIRRSLGVCPQYNALFDKLTVEEHMWF-----YSQLKQVPKDLAQLEISNM 116
I + R +G Q +A+ E + + DLA
Sbjct: 64 QPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVE 123
Query: 117 IVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELLI 176
+ + + +SGG +++L++A AF+ + ++LDE T+ +D S + + L
Sbjct: 124 NMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALD 183
Query: 177 KYKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
KGRT ++ H + + D+I I G++ G
Sbjct: 184 SLMKGRTTLVIAHRLSTI-VDADKIYFIEKGQITGSGK 220
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 132 bits (334), Expect = 1e-38
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 5 NLSKRFPNGKLAVNGLNVNFYEDQ-ITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNH 63
KR N +L NV+F + LG GAGK+ + ++ G++ G ++
Sbjct: 6 RAEKRLGNFRL-----NVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGA 60
Query: 64 DIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGIP 123
DI T + RR +G PQ ALF L+V ++ + + V + + M LGI
Sbjct: 61 DI-TPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLR--NVERVERDRRVREMAEKLGIA 117
Query: 124 HKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELL--IKYKKG 181
H LSGG ++++++A A + R ++LDEP S VD ++ + E L ++ +
Sbjct: 118 HLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFD 177
Query: 182 RTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
++ TH + EA +L D +A++ G++ G
Sbjct: 178 VPILHVTHDLIEAAMLADEVAVMLNGRIVEKGK 210
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 130 bits (328), Expect = 8e-38
Identities = 39/223 (17%), Positives = 89/223 (39%), Gaps = 20/223 (8%)
Query: 1 MAIQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKI 60
M +Q++++ + L+ +I +G NGAGK+T ++ + GM G+ +
Sbjct: 4 MQLQDVAEST-----RLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTS-GKGSIQF 57
Query: 61 YNHDIRT-DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVD 119
+ T + Q V ++ + K + L +
Sbjct: 58 AGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLND-----VAGA 112
Query: 120 LGIPHKRTSLANTLSGGMQRKLSVAMAFI-------GGSRTVILDEPTSGVDPYSRRSIW 172
L + K N LSGG +++ +A + + ++LDEP + +D + ++
Sbjct: 113 LALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALD 172
Query: 173 ELLIK-YKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
++L ++G +++++H ++ R ++ GK+ G
Sbjct: 173 KILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGR 215
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 128 bits (324), Expect = 5e-37
Identities = 47/219 (21%), Positives = 99/219 (45%), Gaps = 8/219 (3%)
Query: 3 IQNLSKRFPNG-KLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIY 61
+N++ +P A+ +N+ + + +G +G+GK+T S++ + G +
Sbjct: 16 FRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMD 75
Query: 62 NHDIRTDM-TTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ---LKQVPKDLAQLEISNMI 117
HD+R ++R + + Q LF+ + ++ +Q+ + + I
Sbjct: 76 GHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFI 135
Query: 118 VDL--GIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELL 175
+ G+ LSGG ++++++A A + S +ILDE TS +D S R+I L
Sbjct: 136 NKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAAL 195
Query: 176 IKYKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
+ +K RT ++ H + + D I ++ G + G+
Sbjct: 196 DELQKNRTSLVIAHRLSTIE-QADEIVVVEDGIIVERGT 233
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 128 bits (322), Expect = 8e-37
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 14/245 (5%)
Query: 3 IQNLSKRFPNG-KLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIY 61
+N+ R+ + ++ +N++ + ++ +G +G+GK+T ++ +G I
Sbjct: 4 FRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLID 63
Query: 62 NHDIRT-DMTTIRRSLGVCPQYNALFDKLTVEEHMWF--YSQLKQVPKDLAQLEISNMIV 118
HD+ D +RR +GV Q N L ++ ++ +++V + I
Sbjct: 64 GHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDFIS 123
Query: 119 DL--GIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELLI 176
+L G LSGG ++++++A A + + +I DE TS +D S I +
Sbjct: 124 ELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMH 183
Query: 177 KYKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS-SVFLKNSFARGYYLSLDMKSA 235
K KGRTVI+ H + DRI ++ GK+ G L Y L
Sbjct: 184 KICKGRTVIIIAHRLSTVK-NADRIIVMEKGKIVEQGKHKELLSEP--ESLYSYL----Y 236
Query: 236 QLQAE 240
QLQ++
Sbjct: 237 QLQSD 241
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 124 bits (313), Expect = 4e-35
Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 19/209 (9%)
Query: 11 PNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMT 70
G + +N+N + ++ + G G+GKT+ + +++G L S G K
Sbjct: 46 LVGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSGR------- 98
Query: 71 TIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKD--LAQLEISNMIVDL--GIPHKR 126
+ C Q++ + T++E++ F + + ++ I
Sbjct: 99 -----VSFCSQFSWIMPG-TIKENIIFGVSYDEYRYKSVVKACQLQQDITKFAEQDNTVL 152
Query: 127 TSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELLI-KYKKGRTVI 185
TLSGG + ++S+A A + +LD P +D ++ ++E + K +T I
Sbjct: 153 GEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLMANKTRI 212
Query: 186 LTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
L T M E D+I I+ G G+
Sbjct: 213 LVTSKM-EHLRKADKILILHQGSSYFYGT 240
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 118 bits (297), Expect = 5e-33
Identities = 48/222 (21%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 3 IQNLSKRFPNGK--LAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKI 60
Q++S +PN L + GL ++T+ +G NG+GK+T ++L + + G +
Sbjct: 14 FQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLL 73
Query: 61 YNHDIRT-DMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQ---LKQVPKDLAQLEISNM 116
+ + + R + Q +F + E + +Q ++++ + +
Sbjct: 74 DGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSF 133
Query: 117 IVDL--GIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWEL 174
I L G + + LSGG ++ +++A A I +ILD+ TS +D S+ + +L
Sbjct: 134 ISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQL 193
Query: 175 LIKYKK--GRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGS 214
L + + R+V+L T ++ + D I + G ++ G+
Sbjct: 194 LYESPERYSRSVLLITQHLSLVE-QADHILFLEGGAIREGGT 234
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 66.9 bits (162), Expect = 2e-14
Identities = 21/178 (11%), Positives = 41/178 (23%), Gaps = 27/178 (15%)
Query: 33 LGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDM-TTIRRSLGVCPQYNALFDKLTV 91
G G GKTT + ++ L + T R + + K
Sbjct: 6 TGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFT 65
Query: 92 EEHMWFYSQLKQVPKDLAQLEISNMIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGGS 151
+ + + + + + A
Sbjct: 66 SKKLVGSYGVNVQYFE-------------------------ELAIPILERAYREAKKDRR 100
Query: 152 RTVILDEPTSGVDPYSRRSIWELLIKYKKGRTVILTTHYMDEADLLGDRIAIIAAGKL 209
+ +I+DE + I + V+ T D L+ I + L
Sbjct: 101 KVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVHPLV-KEIRRLPGAVL 157
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 56.3 bits (134), Expect = 5e-10
Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 2/167 (1%)
Query: 39 GKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFY 98
+ IS M L + + + E
Sbjct: 114 PSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILESAREAALSKIGELASEIFAEFTEGK 173
Query: 99 SQLKQVPKDLAQLEISNMIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGGSRTVILDE 158
V + ++ + + P S ++ G+ +L++++ G +ILDE
Sbjct: 174 YSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDE 233
Query: 159 PTSGVDPYSRRSIWELLIKYKK-GRTVILTTHYMDEADLLGDRIAII 204
PT +D RR + ++ +Y K VIL +H + D D + I
Sbjct: 234 PTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELKD-AADHVIRI 279
Score = 34.0 bits (76), Expect = 0.012
Identities = 13/109 (11%), Positives = 38/109 (34%), Gaps = 6/109 (5%)
Query: 1 MAIQNLS-KRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAK 59
M ++ ++ K F + + V F ++ I +G NG+GK++ + ++ L
Sbjct: 1 MKLERVTVKNF----RSHSDTVVEF-KEGINLIIGQNGSGKSSLLDAILVGLYWPLRIKD 55
Query: 60 IYNHDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDL 108
I + + + + + ++ + + +
Sbjct: 56 IKKDEFTKVGARDTYIDLIFEKDGTKYRITRRFLKGYSSGEIHAMKRLV 104
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 52.9 bits (125), Expect = 8e-09
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 136 GMQRKLSVAMAFIGGSRTVILDEPTSGVDPYSRRSIWELLIKY-KKGRTVILTTHYMDEA 194
G+ +L++++ G +ILDEPT +D RR + ++ +Y KK VIL +H +
Sbjct: 288 GLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDEELK 347
Query: 195 DLLGDRIAII 204
D D + I
Sbjct: 348 D-AADHVIRI 356
Score = 28.3 bits (61), Expect = 0.95
Identities = 8/25 (32%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 20 LNVNFYEDQITSFLGHNGAGKTTTI 44
V F ++ I +G NG+GK++ +
Sbjct: 17 TVVEF-KEGINLIIGQNGSGKSSLL 40
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 43.9 bits (102), Expect = 9e-06
Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 15/133 (11%)
Query: 78 VCPQYNALFDKLTVE-----EHMWFYSQLKQVPKDLAQLEISNMIVDLGIPHKRTSLANT 132
V +A++ +LT E + L +D P KR
Sbjct: 275 VSDHLDAIYRELTKNPNSNVELAGGNASLTIEDEDEPFNAGIKYHAT--PPLKRFKDMEY 332
Query: 133 LSGGMQRKLSVAMAF----IGGSRTVILDEPTSGVDPYSRRSIWELLIKYKKGRT-VILT 187
LSGG + ++A+ F S +LDE + +D + + I + +++ I+
Sbjct: 333 LSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVI 392
Query: 188 TH---YMDEADLL 197
+ +++D L
Sbjct: 393 SLKNTMFEKSDAL 405
Score = 30.5 bits (67), Expect = 0.20
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 21 NVNFYEDQITSFLGHNGAGKTT---TISMLMG 49
V F E TS +G NG+GK+ IS ++G
Sbjct: 19 KVGFGESNFTSIIGPNGSGKSNMMDAISFVLG 50
>d1qnta1 a.4.2.1 (A:92-176) O6-alkylguanine-DNA alkyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 29.9 bits (67), Expect = 0.059
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 14/86 (16%)
Query: 164 DPYSRRSIWELLIKYKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQCCGSSVFLKNSFA 223
+ ++R+ +W+LL K G Y A L G+ A A G G+ V +
Sbjct: 1 ESFTRQVLWKLLKVVKFGE----VISYQQLAALAGNPKAARAVGG-AMRGNPVPILIPCH 55
Query: 224 R---------GYYLSLDMKSAQLQAE 240
R Y L +K L E
Sbjct: 56 RVVCSSGAVGNYSGGLAVKEWLLAHE 81
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 31.2 bits (70), Expect = 0.088
Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 24/169 (14%)
Query: 32 FLGHNGAGKTTTISMLMGMLP--------VSSGTAKIYNHDI------RTDMTTIRRSLG 77
+G G+GKTTT + L V++ T + + + + + G
Sbjct: 15 LVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDG 74
Query: 78 VCPQ---YNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGIPHKRTSLANTLS 134
P+ + ++ D + + ++ P + + + ++
Sbjct: 75 ESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMT 134
Query: 135 GGMQRKLSVAMAF-----IGGSRTVILDEPTSGVDPYSRRSIWELLIKY 178
G Q LSVA AF + G LD G S R + I +
Sbjct: 135 G--QEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYF 181
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 30.5 bits (68), Expect = 0.21
Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 26 EDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYN-HDIRTDMTTIRRSLGVC 79
+Q G +GAGKT + M SG+A N + I S+G
Sbjct: 93 RNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNA 147
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 29.6 bits (65), Expect = 0.28
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 29 ITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDI 65
I F+G G+GKTT L + N D
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGRYL-EDNYKVAYVNLDT 37
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 29.2 bits (64), Expect = 0.37
Identities = 11/96 (11%), Positives = 29/96 (30%), Gaps = 6/96 (6%)
Query: 28 QITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFD 87
++ G G G TT+ + M L K + ++ + + D
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAMDNL------RKEGVNYKMVSFGSVMFEVAKEENLVSDRD 55
Query: 88 KLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGIP 123
++ + K + +A++ + +
Sbjct: 56 QMRKMDPETQKRIQKMAGRKIAEMAKESPVAVDTHS 91
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 29.0 bits (64), Expect = 0.41
Identities = 30/169 (17%), Positives = 52/169 (30%), Gaps = 22/169 (13%)
Query: 32 FLGHNGAGKTTTISMLMGML-----PVSSGTAKIYNHDIRTDMTTIRRSLGVCP------ 80
+G G GK TT L V A +Y + + + +GV
Sbjct: 17 LVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGE 76
Query: 81 QYNALFDKLTVEEHMWFYSQLK--------QVPKDLAQLEISNMIVDLGIPHKRTSLANT 132
+ K VE+ + ++ ++ A LE I + P + T + +
Sbjct: 77 KDVVGIAKRGVEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDA 136
Query: 133 LSGGMQRKLSVAMAFIGGSRTVI---LDEPTSGVDPYSRRSIWELLIKY 178
G L+ T+I +D G S + IK+
Sbjct: 137 SIGQKAYDLASKFNQASKIGTIIITKMDGTAKGGGALSAVAATGATIKF 185
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 28.9 bits (64), Expect = 0.42
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 20 LNVNFYEDQITSFLGHNGAGKTTTISML 47
LNV + +G NG GKTTTI L
Sbjct: 2 LNVEGKAPFVILMVGVNGVGKTTTIGKL 29
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 29.2 bits (64), Expect = 0.43
Identities = 20/136 (14%), Positives = 39/136 (28%), Gaps = 10/136 (7%)
Query: 1 MAIQNLSKRFPNGKLAVNGLNVNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKI 60
M ++ L K + F D++T+ +G NG+GK+ I + + S
Sbjct: 1 MRLKKL--YLKGFKSFGRPSLIGF-SDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELR 57
Query: 61 YNHDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMWF-------YSQLKQVPKDLAQLEI 113
+ Y L + EE + + +I
Sbjct: 58 ASEKFDMIFAGSENLPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVRLKDI 117
Query: 114 SNMIVDLGIPHKRTSL 129
+ G+ S+
Sbjct: 118 RDRFAGTGLGVDFYSI 133
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia
coli [TaxId: 562]}
Length = 222
Score = 28.8 bits (63), Expect = 0.46
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 26 EDQITSFLGHNGAGKTTTISMLMGML 51
++ +T+ G NGAGK+TT++ + L
Sbjct: 23 DELVTTLSGGNGAGKSTTMAAFVTAL 48
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 29.1 bits (64), Expect = 0.53
Identities = 23/158 (14%), Positives = 47/158 (29%), Gaps = 24/158 (15%)
Query: 32 FLGHNGAGKTTTISMLMGM--LPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKL 89
+G AGK++ + +G LP SG ++ +T + K
Sbjct: 31 VVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNSTTEY----AEFLHCKGKKF 86
Query: 90 TVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIG 149
T E + + + IS + ++L + +
Sbjct: 87 TDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLP------------- 133
Query: 150 GSRTVILDEPTSGVDPYSRRSIWELLIKY-KKGRTVIL 186
+ P P I ++L+++ K +IL
Sbjct: 134 ----GMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLIL 167
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 28.5 bits (63), Expect = 0.56
Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 26 EDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNAL 85
+ +I++ G +G GK++ ++ + L + +++ R TT L +
Sbjct: 94 KGKISTMAGLSGVGKSSLLNAINPGLKLR--VSEVSEKLQRGRHTTTTAQLLKFDFGGYV 151
Query: 86 FDKLTVEEHMWFY 98
D
Sbjct: 152 VDTPGFANLEIND 164
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 28.4 bits (62), Expect = 0.69
Identities = 20/179 (11%), Positives = 44/179 (24%), Gaps = 13/179 (7%)
Query: 32 FLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTV 91
GH G+GK+T L + V + + + L +
Sbjct: 9 LSGHPGSGKSTIAEALANLPGVPK---------VHFHSDDLWGYIKHGRIDPWLPQ--SH 57
Query: 92 EEHMWFYSQLKQVPKDLAQLEISNMIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGGS 151
+++ V A+ ++ + P + L A
Sbjct: 58 QQNRMIMQIAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYIVLRTTAAEA-IE 116
Query: 152 RTVILDEPTSGVDPYSRRSIWELLIKYKKGRTVILTTHYMDEADLLGDRIAIIAAGKLQ 210
R + + + V+ + D L I + +G+ +
Sbjct: 117 RCLDRGGDSLSDPLVVADLHSQFADLGAFEHHVLPVSG-KDTDQALQSAINALQSGRFR 174
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 28.1 bits (62), Expect = 0.70
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 11/95 (11%)
Query: 32 FLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMT-------TIRRSLGVCPQYNA 84
+GH GKTT + + +L G AK ++ + TI +
Sbjct: 8 TIGHVDHGKTTLTAAITKIL-AEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAAR 66
Query: 85 LFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVD 119
+ H + +K + A L+ ++V
Sbjct: 67 HYAHTDCPGHADY---VKNMITGTAPLDGCILVVA 98
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 28.2 bits (62), Expect = 0.88
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 20 LNVNFYEDQITSFLGHNGAGKTTTISML 47
LNV + +G NG GKTT+ L
Sbjct: 4 LNVPPEPPFVIMVVGVNGTGKTTSCGKL 31
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 28.2 bits (62), Expect = 0.90
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 28 QITSFLGHNGAGKTTTISML 47
++ +G NG GKTTTI+ L
Sbjct: 7 RVVLVVGVNGVGKTTTIAKL 26
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 27.9 bits (61), Expect = 1.2
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 32 FLGHNGAGKTTTISMLMGM--LPVSSGTA 58
+G +GK++ + ++G LP SG
Sbjct: 29 VVGSQSSGKSSVLENIVGRDFLPRGSGIV 57
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 27.8 bits (61), Expect = 1.3
Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 23/171 (13%)
Query: 31 SFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLT 90
S + H GK+T L+ + S T R + + +L+ +++
Sbjct: 21 SVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMS 80
Query: 91 VEEHMWFYSQLKQVPKDLAQLEISNMIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGG 150
E+ K + N+I G S + L V +
Sbjct: 81 DEDVKEIK------QKTDGNSFLINLIDSPGHVD--------FSSEVTAALRVTDGAL-- 124
Query: 151 SRTVILDEPTSGVDPYSRRSIWELLIKYKKGRTVILTTHYMDEADLLGDRI 201
++ + GV + + + + V++ +D A L
Sbjct: 125 ----VVVDTIEGVCVQTET-VLRQALGERIKPVVVIN--KVDRALLELQVS 168
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 27.8 bits (61), Expect = 1.4
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 22 VNFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAK 59
+ E+Q G +GAGKT ++ + + +
Sbjct: 118 LTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGE 155
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 27.3 bits (59), Expect = 1.4
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 29 ITSFLGHNGAGKTTTISMLMGML 51
I G G GK+T ++ + +L
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEIL 25
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 27.4 bits (60), Expect = 1.9
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 26 EDQITSFLGHNGAGKTTTISMLM 48
E+Q G +GAGKT +M
Sbjct: 85 ENQCVIISGESGAGKTEASKKIM 107
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha,
N-terminal (G) domain {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 239
Score = 26.9 bits (59), Expect = 2.1
Identities = 14/66 (21%), Positives = 20/66 (30%), Gaps = 6/66 (9%)
Query: 32 FLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTV 91
+GH +GK+TT L+ I I +Y + DKL
Sbjct: 11 VIGHVDSGKSTTTGHLIYK------CGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKA 64
Query: 92 EEHMWF 97
E
Sbjct: 65 ERERGI 70
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 26.9 bits (58), Expect = 2.1
Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 13/109 (11%)
Query: 29 ITSFLGHNGAGKTTTISMLMGMLP---VSSGTAKIYNHDIRTDMTTIRRS---------- 75
+ +F +G GKTT + L+ L + G K +HD+ D
Sbjct: 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQT 63
Query: 76 LGVCPQYNALFDKLTVEEHMWFYSQLKQVPKDLAQLEISNMIVDLGIPH 124
+ Q AL + EE + ++ L + I
Sbjct: 64 IVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAK 112
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 26.9 bits (58), Expect = 2.3
Identities = 15/134 (11%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 32 FLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTV 91
G G+GKT+ S + + I D T ++ + L++K V
Sbjct: 37 LGGQPGSGKTSLRSAIFEET---------QGNVIVIDNDTFKQQHPNFDELVKLYEKDVV 87
Query: 92 EEHMWFYSQLKQVPKDLAQLEISNMIVDLGIPHKRTSLANTLSGGMQRKLSVAMAFIGGS 151
+ + +++ + + N++++ T + + M +
Sbjct: 88 KHVTPYSNRMTEAIISRLSDQGYNLVIEGT-GRTTDVPIQTATMLQAKGYETKMYVMAVP 146
Query: 152 RTVILDEPTSGVDP 165
+ +
Sbjct: 147 KINSYLGTIERYET 160
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 26.3 bits (57), Expect = 2.4
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Query: 28 QITSFLGHNGAGKTTTISMLMGMLP---VSSGTAKIYNHDIRTDMTTIRRS 75
+ +G+ +GKTT + + GT K + H S
Sbjct: 2 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDS 52
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 27.0 bits (59), Expect = 2.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 26 EDQITSFLGHNGAGKTTTISMLMGMLPVSSG 56
++Q G +GAGKT ++ L +G
Sbjct: 124 QNQSLLITGESGAGKTENTKKVIQYLASVAG 154
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 26.5 bits (57), Expect = 2.5
Identities = 12/84 (14%), Positives = 23/84 (27%), Gaps = 2/84 (2%)
Query: 34 GHNGAGKTTTISMLMGMLPVSSGTAKIYNHDI-RTDMTTIRRSLGVCPQYNALFDKLTVE 92
G G GKTT I +L S + + R I + ++ +E
Sbjct: 8 GPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGLE 67
Query: 93 EHMWFYSQLKQVPKDLAQLEISNM 116
+ + + +
Sbjct: 68 P-PPGKRECRVGQYVVDLTSFEQL 90
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 26.5 bits (57), Expect = 2.5
Identities = 5/18 (27%), Positives = 10/18 (55%)
Query: 32 FLGHNGAGKTTTISMLMG 49
G +GKT+ +++L
Sbjct: 8 IAGPQNSGKTSLLTLLTT 25
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 26.6 bits (58), Expect = 2.5
Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 23 NFYEDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQY 82
++D+ T F G +G GK++ ++ + P + + T R +
Sbjct: 93 PHFQDKTTVFAGQSGVGKSSLLNA---ISPELGLRTNEISEHLGRGKHTTRHVELIHTSG 149
Query: 83 NALFDKLTVEEHMWFY 98
+ D +
Sbjct: 150 GLVADTPGFSSLEFTD 165
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 26.6 bits (57), Expect = 2.7
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 29 ITSFLGHNGAGKTTTISMLMGM-LPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFD 87
+ +G GK+T ++ L+G+ + S + +R +T RR +
Sbjct: 7 FVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKP 66
Query: 88 KLTVEEHMWFY 98
+ E M
Sbjct: 67 MDALGEFMDQE 77
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 26.6 bits (58), Expect = 3.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 26 EDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAK 59
EDQ G +GAGKT ++ L V + + K
Sbjct: 90 EDQSILCTGESGAGKTENTKKVIQYLAVVASSHK 123
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 26.6 bits (58), Expect = 3.7
Identities = 10/46 (21%), Positives = 17/46 (36%)
Query: 26 EDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTT 71
E+Q G +GAGKT ++ L + K + +
Sbjct: 120 ENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEG 165
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.0 bits (56), Expect = 4.2
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 9/71 (12%)
Query: 32 FLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTV 91
+GAGK++ I L+ P +D + ++ R + + +
Sbjct: 7 VSAPSGAGKSSLIQALLKTQP---------LYDTQVSVSHTTRQPRPGEVHGEHYFFVNH 57
Query: 92 EEHMWFYSQLK 102
+E S+
Sbjct: 58 DEFKEMISRDA 68
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase,
BchI {Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 26.1 bits (56), Expect = 4.5
Identities = 9/39 (23%), Positives = 13/39 (33%)
Query: 32 FLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMT 70
G G GK+T + L +LP +M
Sbjct: 33 VFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMI 71
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 26.3 bits (57), Expect = 4.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 32 FLGHNGAGKTTTISMLMGMLPVSSGTAK 59
G G+GK++ I+ L G+ G AK
Sbjct: 61 VTGETGSGKSSFINTLRGIGNEEEGAAK 88
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 25.4 bits (54), Expect = 5.1
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 32 FLGHNGAGKTTTISMLMG 49
+G +GKTT ++++
Sbjct: 7 LVGLQYSGKTTFVNVIAS 24
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 25.5 bits (54), Expect = 5.1
Identities = 12/67 (17%), Positives = 23/67 (34%)
Query: 34 GHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTVEE 93
G + +GKTT + L L + +++ D R G + + + VE
Sbjct: 29 GLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWFEYYYLQWDVEW 88
Query: 94 HMWFYSQ 100
+
Sbjct: 89 LTHQLFR 95
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 25.8 bits (56), Expect = 5.8
Identities = 10/47 (21%), Positives = 15/47 (31%)
Query: 31 SFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLG 77
H AGKTTT ++ +++ D R G
Sbjct: 10 GIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERG 56
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 25.4 bits (54), Expect = 6.0
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 6/30 (20%)
Query: 21 NVNFYEDQITSFLGHNGAGKTTTISMLMGM 50
N+N GH GKTT +L +
Sbjct: 5 NINL------GIFGHIDHGKTTLSKVLTEI 28
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 25.7 bits (55), Expect = 6.1
Identities = 7/25 (28%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 20 LNVNFYEDQITSFLGHNGAGKTTTI 44
+ + F T+ +G NG+GK+
Sbjct: 20 VVIPF-SKGFTAIVGANGSGKSNIG 43
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 25.6 bits (55), Expect = 6.2
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 31 SFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRR 74
+ +GH G+GKTT L+ ++ TD T +
Sbjct: 6 ALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAK 49
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 24.9 bits (53), Expect = 7.7
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 32 FLGHNGAGKTTTISML---MGMLPVSSGTAKIYNHDIRTDM 69
LG AGK T + G+ +S+G +++
Sbjct: 5 LLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSEL 45
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha,
N-terminal (G) domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 224
Score = 25.2 bits (54), Expect = 8.0
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 6/63 (9%)
Query: 33 LGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTVE 92
+GH GK+T + L+ I ++ ++ ++ L D+L E
Sbjct: 9 IGHVDHGKSTLVGRLLMD------RGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEE 62
Query: 93 EHM 95
Sbjct: 63 RER 65
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Archaeon Pyrococcus abyssi
[TaxId: 29292]}
Length = 195
Score = 24.9 bits (53), Expect = 8.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 31 SFLGHNGAGKTTTISMLMGML 51
+GH GKTT L G+
Sbjct: 9 GMVGHVDHGKTTLTKALTGVW 29
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 24.8 bits (53), Expect = 8.6
Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
Query: 26 EDQITSF----LGHNGAGKTTTISMLMG 49
ED +T+ +G +G GK++ +
Sbjct: 2 EDVLTTLKILIIGESGVGKSSLLLRFTD 29
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus
[TaxId: 274]}
Length = 426
Score = 25.2 bits (54), Expect = 8.7
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 10 FPNGKLAVNGLNVNFYEDQITSFLGHN 36
P G+ +N + FY+ + L
Sbjct: 81 LPEGRGRINPKGLAFYDRLVDRLLASG 107
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 25.2 bits (54), Expect = 8.8
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Query: 37 GAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTVEEHMW 96
G GK+TTI L +L + + D + T +L ++ + +
Sbjct: 61 GVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGS-----ILGDKTRMARLAIDRNAF 115
Query: 97 FYS 99
Sbjct: 116 IRP 118
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 25.0 bits (53), Expect = 9.2
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Query: 34 GHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNALFDKLTVEE 93
G + AGK+ + L +LP + M +S +++A E
Sbjct: 10 GGSSAGKSGIVRCLQSVLP--EPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIGPE 67
Query: 94 HMWFYSQLKQVPKDLAQLEISNMIVDLGIPHKR 126
+ +A+ +I D+ +
Sbjct: 68 FRALEGAWAEGVVAMARAGARIIIDDVFLGGAA 100
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 25.0 bits (53), Expect = 9.5
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 32 FLGHNGAGKTTTISMLMG 49
F+G +GKT L+
Sbjct: 5 FVGLCDSGKTLLFVRLLT 22
>d1wlja_ c.55.3.5 (A:) Interferon-stimulated gene 20 kDa protein,
ISG20 {Human (Homo sapiens) [TaxId: 9606]}
Length = 173
Score = 24.6 bits (52), Expect = 9.5
Identities = 5/40 (12%), Positives = 12/40 (30%)
Query: 154 VILDEPTSGVDPYSRRSIWELLIKYKKGRTVILTTHYMDE 193
V +D G+ P+ + + G + +
Sbjct: 3 VAMDCEMVGLGPHRESGLARCSLVNVHGAVLYDKFIRPEG 42
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 24.9 bits (53), Expect = 9.6
Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 32 FLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVC 79
+GH GKTT + + G+ +S ++ + + ++GVC
Sbjct: 13 VVGHVDHGKTTLVQAITGIW--TSKHSEELKRGMTIKLGYAETNIGVC 58
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 25.3 bits (54), Expect = 9.8
Identities = 13/91 (14%), Positives = 24/91 (26%), Gaps = 4/91 (4%)
Query: 26 EDQITSFLGHNGAGKTTTISMLMGMLPVSSGTAKIYNHDIRTDMTTIRRSLGVCPQYNAL 85
E + G G GK+ + L + I D DM +
Sbjct: 49 EPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIV--DPNGDML--SKFGRDKDIILNP 104
Query: 86 FDKLTVEEHMWFYSQLKQVPKDLAQLEISNM 116
+D+ T + + + A +
Sbjct: 105 YDQRTKGWSFFNEIRNDYDWQRYALSVVPRG 135
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.395
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 915,466
Number of extensions: 40576
Number of successful extensions: 353
Number of sequences better than 10.0: 1
Number of HSP's gapped: 299
Number of HSP's successfully gapped: 97
Length of query: 251
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 168
Effective length of database: 1,268,006
Effective search space: 213025008
Effective search space used: 213025008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)