Query psy7368
Match_columns 93
No_of_seqs 102 out of 547
Neff 7.5
Searched_HMMs 13730
Date Sat Aug 17 00:56:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7368.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7368hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3dlqi1 a.26.1.3 (I:41-179) In 67.6 2.6 0.00019 25.2 3.3 49 23-81 18-66 (139)
2 d2ilka_ a.26.1.3 (A:) Interleu 43.2 4.7 0.00035 24.4 1.5 18 64-81 57-74 (155)
3 d1lqsl_ a.26.1.3 (L:) Interleu 40.4 5.5 0.0004 23.8 1.4 17 65-81 50-66 (142)
4 d1n1fa_ a.26.1.3 (A:) Interleu 38.4 6.1 0.00044 23.9 1.4 16 66-81 56-71 (156)
5 d3bi1a1 a.48.2.1 (A:594-750) G 20.5 22 0.0016 20.6 1.7 21 71-91 74-94 (157)
6 d2h8pc1 f.14.1.1 (C:22-78) Pot 19.1 55 0.004 16.0 4.3 28 54-81 8-35 (57)
7 d1wf3a1 c.37.1.8 (A:3-180) GTP 18.2 19 0.0014 20.6 1.0 8 86-93 170-177 (178)
8 d2p06a1 a.204.1.3 (A:1-84) Hyp 17.9 45 0.0032 17.2 2.3 23 66-91 10-33 (84)
9 d1de4c1 a.48.2.1 (C:609-756) T 17.3 33 0.0024 20.0 2.0 19 73-91 71-89 (148)
10 d1efya1 a.41.1.1 (A:662-796) D 11.3 51 0.0037 18.8 1.5 14 77-90 77-90 (135)
No 1
>d3dlqi1 a.26.1.3 (I:41-179) Interleukin-22 (IL-22) {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.65 E-value=2.6 Score=25.23 Aligned_cols=49 Identities=14% Similarity=-0.004 Sum_probs=27.2
Q ss_pred HHHHHHHHhhhcCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy7368 23 GAFVIATWEEAGLGVQWDNWDKKLSPSDPFSLYDIVWFLYVDSAIYLILVWYIEAVFPD 81 (93)
Q Consensus 23 g~~~i~~~E~~~~G~~w~~~~~~~~~~~~~s~~~~~~~l~~d~~ly~ll~wYld~V~Pg 81 (93)
.+...++.+....++.--+- . .. +++.-...+ +++.-+|-.|+|.|+|.
T Consensus 18 ~~~~~a~~~D~~~dvrLL~~--~-ll-~~vk~~~~C------~~~~~lL~FYL~~Vl~~ 66 (139)
T d3dlqi1 18 MLAKEASLADNNTDVRLIGE--K-LF-HGVSMSERC------YLMKQVLNFTLEEVLFP 66 (139)
T ss_dssp HHHHHHHHTCCCTTCCCSSG--G-GG-TTCCGGGHH------HHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHhhccccchhhcCH--H-HH-hhccccccc------HHHHHHHHHHHHHhccc
Confidence 45556666666655553221 1 11 122222233 34567899999999984
No 2
>d2ilka_ a.26.1.3 (A:) Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.18 E-value=4.7 Score=24.40 Aligned_cols=18 Identities=28% Similarity=0.604 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHhcCC
Q psy7368 64 DSAIYLILVWYIEAVFPD 81 (93)
Q Consensus 64 d~~ly~ll~wYld~V~Pg 81 (93)
=.++.-+|-.|+|.|+|.
T Consensus 57 C~~~~~lL~FYLe~V~p~ 74 (155)
T d2ilka_ 57 CQALSEMIQFYLEEVMPQ 74 (155)
T ss_dssp HHHHHHHHHHHHHHTHHH
T ss_pred hHHHHHHHHHHHHHHhcc
Confidence 356788999999999983
No 3
>d1lqsl_ a.26.1.3 (L:) Interleukin-10 (cytokine synthesis inhibitory factor, CSIF) {Human herpesvirus 5 [TaxId: 10359]}
Probab=40.38 E-value=5.5 Score=23.76 Aligned_cols=17 Identities=41% Similarity=0.698 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHhcCC
Q psy7368 65 SAIYLILVWYIEAVFPD 81 (93)
Q Consensus 65 ~~ly~ll~wYld~V~Pg 81 (93)
.++.-+|..|+|.|+|.
T Consensus 50 ~~~~~lL~FYLd~Vfp~ 66 (142)
T d1lqsl_ 50 SVMDWLLRRYLEIVFPA 66 (142)
T ss_dssp HHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 35678899999999984
No 4
>d1n1fa_ a.26.1.3 (A:) Interleukin-19 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.42 E-value=6.1 Score=23.86 Aligned_cols=16 Identities=31% Similarity=0.675 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHhcCC
Q psy7368 66 AIYLILVWYIEAVFPD 81 (93)
Q Consensus 66 ~ly~ll~wYld~V~Pg 81 (93)
++.-+|-.|+|.|+|.
T Consensus 56 ~~~~lL~FYLe~Vfp~ 71 (156)
T d1n1fa_ 56 VTKNLLAFYVDRVFKD 71 (156)
T ss_dssp HHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHhHh
Confidence 4567899999999985
No 5
>d3bi1a1 a.48.2.1 (A:594-750) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.50 E-value=22 Score=20.58 Aligned_cols=21 Identities=24% Similarity=0.545 Sum_probs=17.9
Q ss_pred HHHHHHHhcCCCCCCCCCCCC
Q psy7368 71 LVWYIEAVFPDGVGVFSQPLN 91 (93)
Q Consensus 71 l~wYld~V~Pg~~Gv~~~pw~ 91 (93)
---.+|+-|=.+.|.|.+|||
T Consensus 74 ~L~~~Er~Fl~~~GlpgR~~~ 94 (157)
T d3bi1a1 74 QLMFLERAFIDPLGLPDRPFY 94 (157)
T ss_dssp HHHHHHHTTBCTTCBTTBTTC
T ss_pred HHHHHHHHhcCccCCCCCCcc
Confidence 345789999999999999996
No 6
>d2h8pc1 f.14.1.1 (C:22-78) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=19.07 E-value=55 Score=15.99 Aligned_cols=28 Identities=14% Similarity=-0.103 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy7368 54 LYDIVWFLYVDSAIYLILVWYIEAVFPD 81 (93)
Q Consensus 54 ~~~~~~~l~~d~~ly~ll~wYld~V~Pg 81 (93)
++....++.+-.++...+.+|.|+=-|+
T Consensus 8 ~~~~~~~~~i~i~~~s~~~y~~E~~~~~ 35 (57)
T d2h8pc1 8 AGAATVLLVIVLLAGSYLAVLAERGAPG 35 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4556666777777889999999975544
No 7
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=18.21 E-value=19 Score=20.59 Aligned_cols=8 Identities=25% Similarity=0.326 Sum_probs=5.9
Q ss_pred CCCCCCCC
Q psy7368 86 FSQPLNQP 93 (93)
Q Consensus 86 ~~~pw~Fp 93 (93)
|.+||+||
T Consensus 170 pe~p~~~p 177 (178)
T d1wf3a1 170 PEGPFFYP 177 (178)
T ss_dssp CBCCCSSC
T ss_pred CCCCCCCC
Confidence 45688887
No 8
>d2p06a1 a.204.1.3 (A:1-84) Hypothetical protein AF0060 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=17.92 E-value=45 Score=17.17 Aligned_cols=23 Identities=17% Similarity=0.183 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHhc-CCCCCCCCCCCC
Q psy7368 66 AIYLILVWYIEAVF-PDGVGVFSQPLN 91 (93)
Q Consensus 66 ~ly~ll~wYld~V~-Pg~~Gv~~~pw~ 91 (93)
++--..+-|..+|- ||. .|+ |||
T Consensus 10 flremhakymkrvsrpgn--tpr-pwf 33 (84)
T d2p06a1 10 FLREMHAKYMKRVSRPGN--TPR-PWF 33 (84)
T ss_dssp HHHHHHHHHHHHHTSTTC--CSC-HHH
T ss_pred HHHHHHHHHHHHccCCCC--CCC-Ccc
Confidence 34445677888874 554 666 886
No 9
>d1de4c1 a.48.2.1 (C:609-756) Transferrin receptor ectodomain, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.30 E-value=33 Score=20.00 Aligned_cols=19 Identities=11% Similarity=-0.157 Sum_probs=16.7
Q ss_pred HHHHHhcCCCCCCCCCCCC
Q psy7368 73 WYIEAVFPDGVGVFSQPLN 91 (93)
Q Consensus 73 wYld~V~Pg~~Gv~~~pw~ 91 (93)
-.+|+-|=.++|.|.+|||
T Consensus 71 ~~~Er~fl~~~glp~r~~~ 89 (148)
T d1de4c1 71 MRVEYHFLSPYVSPKESPF 89 (148)
T ss_dssp HHHHHTTBCTTSCTTTCCC
T ss_pred HHHHHHhcCccCCCCCCcc
Confidence 4689999999999999996
No 10
>d1efya1 a.41.1.1 (A:662-796) Domain of poly(ADP-ribose) polymerase {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=11.32 E-value=51 Score=18.82 Aligned_cols=14 Identities=29% Similarity=0.667 Sum_probs=11.5
Q ss_pred HhcCCCCCCCCCCC
Q psy7368 77 AVFPDGVGVFSQPL 90 (93)
Q Consensus 77 ~V~Pg~~Gv~~~pw 90 (93)
.++|..||..++|.
T Consensus 77 tlIPH~fg~~~pp~ 90 (135)
T d1efya1 77 TLIPHDFGMKKPPL 90 (135)
T ss_dssp HHSCBCCCSSCCCC
T ss_pred HhCCcccCCCCCCC
Confidence 57899999998765
Done!