BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7370
(247 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P41233|ABCA1_MOUSE ATP-binding cassette sub-family A member 1 OS=Mus musculus GN=Abca1
PE=1 SV=4
Length = 2261
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 130/202 (64%), Gaps = 3/202 (1%)
Query: 46 KCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQ--PGYDKLKPTLTYSIRMSTTL 103
+C++ NK+ P N + +D WA I FT P +L + Y IRM
Sbjct: 503 ECVNLNKLEPIPTEVRLINKSMELLDERKFWAGIVFTGITPDSVELPHHVKYKIRMDIDN 562
Query: 104 IGDT-YISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTPGIVLQQF 162
+ T I D ++ PR+ P D++Y+ GFAYLQD+VEQ+II+ TG + G+ +QQ
Sbjct: 563 VERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGSEKKTGVYVQQM 622
Query: 163 PYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHW 222
PYPCY++D F++ +S++ PLFM L+W+++ A+I KSIVYEK+ RLKE MR+MGL NG+ W
Sbjct: 623 PYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKSIVYEKEARLKETMRIMGLDNGILW 682
Query: 223 TAWFIDSIVVMIITAVLLSLLL 244
+WF+ S++ ++++A LL ++L
Sbjct: 683 FSWFVSSLIPLLVSAGLLVVIL 704
>sp|O95477|ABCA1_HUMAN ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1
PE=1 SV=3
Length = 2261
Score = 177 bits (450), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 46 KCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQ--PGYDKLKPTLTYSIRMSTTL 103
+C++ NK+ P N + +D WA I FT PG +L + Y IRM
Sbjct: 503 ECVNLNKLEPIATEVWLINKSMELLDERKFWAGIVFTGITPGSIELPHHVKYKIRMDIDN 562
Query: 104 IGDT-YISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTPGIVLQQF 162
+ T I D ++ PR+ P D++Y+ GFAYLQD+VEQ+II+ TG + G+ +QQ
Sbjct: 563 VERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGTEKKTGVYMQQM 622
Query: 163 PYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHW 222
PYPCY++D F++ +S++ PLFM L+W+++ A+I K IVYEK+ RLKE MR+MGL N + W
Sbjct: 623 PYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILW 682
Query: 223 TAWFIDSIVVMIITAVLLSLLL 244
+WFI S++ ++++A LL ++L
Sbjct: 683 FSWFISSLIPLLVSAGLLVVIL 704
>sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens
GN=ABCA4 PE=1 SV=3
Length = 2273
Score = 164 bits (415), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 46 KCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQ--PGYDKLKPTLTYSIRMSTTL 103
+C+ +K YND A ++ N WA + F P L P + Y IRM +
Sbjct: 518 ECLVLDKFESYNDETQLTQRALSLLEENMFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDV 577
Query: 104 IGDT-YISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTPGIVLQQF 162
+ T I D ++ PR+ P+ D +YI GFAYLQDMVEQ I + ++ GI LQQ
Sbjct: 578 VEKTNKIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGITRSQVQAEAPVGIYLQQM 637
Query: 163 PYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHW 222
PYPC+++D F+ +++ FP+FMVL+W+++ +M KSIV EK+ RLKE ++ G+SN V W
Sbjct: 638 PYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNAVIW 697
Query: 223 TAWFIDSIVVMIITAVLLSLLLV 245
WF+DS +M ++ LL++ ++
Sbjct: 698 CTWFLDSFSIMSMSIFLLTIFIM 720
>sp|O35600|ABCA4_MOUSE Retinal-specific ATP-binding cassette transporter OS=Mus musculus
GN=Abca4 PE=2 SV=1
Length = 2310
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 120/203 (59%), Gaps = 3/203 (1%)
Query: 46 KCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQ--PGYDKLKPTLTYSIRMSTTL 103
+C+ +K Y+D A ++ N WA + F P L P + Y IRM +
Sbjct: 518 ECLVLDKFESYDDEVQLTQRALSLLEENRFWAGVVFPGMYPWASSLPPHVKYKIRMDIDV 577
Query: 104 IGDT-YISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTPGIVLQQF 162
+ T I D ++ PR+ P+ D +YI GFAYLQDMVEQ I++ + G+ LQQ
Sbjct: 578 VEKTNKIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGIVKSQMQAEPPIGVYLQQM 637
Query: 163 PYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHW 222
PYPC+++D F+ +++ FP+FMVL+W+++ +M K IV EK+ RLKE ++ G+SN V W
Sbjct: 638 PYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKELRLKETLKNQGVSNAVIW 697
Query: 223 TAWFIDSIVVMIITAVLLSLLLV 245
WF+DS +M ++ LL+L ++
Sbjct: 698 CTWFLDSFSIMALSIFLLTLFIM 720
>sp|Q7TNJ2|ABCA7_RAT ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus
GN=Abca7 PE=1 SV=1
Length = 2170
Score = 144 bits (362), Expect = 8e-34, Method: Composition-based stats.
Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 16/199 (8%)
Query: 46 KCIDFNKI--VPYNDSATAENDAFLRMDNNTLWALINFTQPGY--DKLKPT--------- 92
+C+ +K+ VP ++ + A + LWA I F P + D +P
Sbjct: 402 ECVSLDKLEAVPSEEALVSR--ALELLGERRLWAGIVFLSPEHPLDSSEPPSPTTTGPGH 459
Query: 93 LTYSIRMSTTLIGDT-YISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGR 151
L IRM + T I D F+ P + PL DL+Y+ GF YLQD++EQ+ ++ +GR
Sbjct: 460 LRVKIRMDIDDVTRTNKIRDKFWDPGPSADPLMDLRYVWGGFVYLQDLLEQAAVRVLSGR 519
Query: 152 KSTPGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMM 211
S G+ LQQ P+PCY++D F++ +S++ PLF+ L+W+++ A+ K++V EK+ RL+E M
Sbjct: 520 DSRAGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETM 579
Query: 212 RVMGLSNGVHWTAWFIDSI 230
R MGLS V W WF+ +
Sbjct: 580 RAMGLSRAVLWLGWFLSCL 598
>sp|Q91V24|ABCA7_MOUSE ATP-binding cassette sub-family A member 7 OS=Mus musculus GN=Abca7
PE=1 SV=1
Length = 2159
Score = 139 bits (351), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/199 (35%), Positives = 112/199 (56%), Gaps = 17/199 (8%)
Query: 46 KCIDFNKI--VPYNDSATAENDAFLRMDNNTLWALINFTQPGYDKLKPT----------- 92
+C+ +K+ VP ++ + A + LWA I F P + L P+
Sbjct: 402 ECVSLDKLEAVPSEEALVSR--ALELLGERRLWAGIVFLSPEH-PLDPSELSSPALSPGH 458
Query: 93 LTYSIRMSTTLIGDT-YISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGR 151
L + IRM + T I D F+ P + P DL+Y+ GF YLQD++EQ+ ++ G
Sbjct: 459 LRFKIRMDIDDVTRTNKIRDKFWDPGPSADPFMDLRYVWGGFVYLQDLLEQAAVRVLGGG 518
Query: 152 KSTPGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMM 211
S G+ LQQ P+PCY++D F++ +S++ PLF+ L+W+++ A+ K++V EK+ RL+E M
Sbjct: 519 NSRTGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSVALTVKAVVREKETRLRETM 578
Query: 212 RVMGLSNGVHWTAWFIDSI 230
R MGLS V W WF+ +
Sbjct: 579 RAMGLSRAVLWLGWFLSCL 597
>sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7
PE=1 SV=3
Length = 2146
Score = 137 bits (345), Expect = 7e-32, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 13/197 (6%)
Query: 46 KCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQPGYDKLKPT-----------LT 94
+C+ +K+ A + A + + WA + F P D PT +
Sbjct: 405 ECLSLDKLEAAPSEAALVSRALQLLAEHRFWAGVVFLGP-EDSSDPTEHPTPDLGPGHVR 463
Query: 95 YSIRMSTTLIGDT-YISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKS 153
IRM ++ T I D F+ P + PL DL+Y+ GF YLQD+VE++ ++ +G
Sbjct: 464 IKIRMDIDVVTRTNKIRDRFWDPGPAADPLTDLRYVWGGFVYLQDLVERAAVRVLSGANP 523
Query: 154 TPGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRV 213
G+ LQQ PYPCY++D F++ +S++ PLF+ L+W+++ + K++V EK+ RL++ MR
Sbjct: 524 RAGLYLQQMPYPCYVDDVFLRVLSRSLPLFLTLAWIYSVTLTVKAVVREKETRLRDTMRA 583
Query: 214 MGLSNGVHWTAWFIDSI 230
MGLS V W WF+ +
Sbjct: 584 MGLSRAVLWLGWFLSCL 600
>sp|Q9ESR9|ABCA2_RAT ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus
GN=Abca2 PE=1 SV=1
Length = 2434
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 5/176 (2%)
Query: 71 DNNTLWALINFTQPGYDKLKPTLTYSIRMSTTLIGDT-YISDHFYTLDPRSRPLYDLKYI 129
DN T++A + F L P + Y IR +++ T I ++ P + + Y
Sbjct: 599 DNVTVFASVIFQTRKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRF---YF 655
Query: 130 TFGFAYLQDMVEQSIIQEHTGRKST-PGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSW 188
+GF ++QDM+E++II G PG +Q FPYPCY D F+ + PL MV+SW
Sbjct: 656 LYGFVWIQDMIERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISW 715
Query: 189 VFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLL 244
V++ AM + IV EK+ RLKE+M+ MGL+N VHW AWFI V + I+ L+ +L
Sbjct: 716 VYSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAIL 771
>sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2
PE=1 SV=3
Length = 2435
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 5/176 (2%)
Query: 71 DNNTLWALINFTQPGYDKLKPTLTYSIRMSTTLIGDT-YISDHFYTLDPRSRPLYDLKYI 129
DN T++A + F L P + Y IR +++ T I ++ P + + Y
Sbjct: 599 DNVTVFASVIFQTRKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRF---YF 655
Query: 130 TFGFAYLQDMVEQSIIQEHTGRKST-PGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSW 188
+GF ++QDM+E++II G PG +Q FPYPCY D F+ + PL MV+SW
Sbjct: 656 LYGFVWIQDMMERAIIDTFVGHDVVEPGSYVQMFPYPCYTRDDFLFVIEHMMPLCMVISW 715
Query: 189 VFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLL 244
V++ AM + IV EK+ RLKE+M+ MGL+N VHW AWFI V + I+ L+ +L
Sbjct: 716 VYSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAIL 771
>sp|P41234|ABCA2_MOUSE ATP-binding cassette sub-family A member 2 OS=Mus musculus GN=Abca2
PE=1 SV=4
Length = 2434
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 5/176 (2%)
Query: 71 DNNTLWALINFTQPGYDKLKPTLTYSIRMSTTLIGDT-YISDHFYTLDPRSRPLYDLKYI 129
DN T++A + F L P + Y IR +++ T I ++ P + + Y
Sbjct: 598 DNVTVFASVIFQTRKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRF---YF 654
Query: 130 TFGFAYLQDMVEQSIIQEHTGRKST-PGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSW 188
+G QDM+E++II G PG +Q FPYPCY D F+ + PL MV+SW
Sbjct: 655 LYGLRLDQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISW 714
Query: 189 VFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLL 244
V++ AM + IV EK+ RLKE+M+ MGL+N VHW AWFI V + I+ L+ +L
Sbjct: 715 VYSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAIL 770
>sp|Q86UQ4|ABCAD_HUMAN ATP-binding cassette sub-family A member 13 OS=Homo sapiens GN=ABCA13
PE=2 SV=3
Length = 5058
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 114/210 (54%), Gaps = 11/210 (5%)
Query: 45 NKCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQPGYDK--------LKPTLTYS 96
+ C+ N+ E A + N+ A I F+ +DK L P ++Y+
Sbjct: 3428 SSCVALNRFQALQSVDILETKAHELLQQNSFLASIIFSNSLFDKNFRSESVKLPPHVSYT 3487
Query: 97 IRMSTTL-IGDTYISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKS-T 154
IR + + + + + P++ P KY + FA LQDM+E++II TG+++
Sbjct: 3488 IRTNVLYSVRTDVVKNPSWKFHPQNLPADGFKY-NYVFAPLQDMIERAIILVQTGQEALE 3546
Query: 155 PGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVM 214
P Q PYPC+ D F+ V FPL M+L+W+ + A + + +VYE++ +++E MR+M
Sbjct: 3547 PAAQTQAAPYPCHTSDLFLNNVGFFFPLIMMLTWMVSVASMVRKLVYEQEIQIEEYMRMM 3606
Query: 215 GLSNGVHWTAWFIDSIVVMIITAVLLSLLL 244
G+ +H+ AWF++++ V+ I++ L+++L
Sbjct: 3607 GVHPVIHFLAWFLENMAVLTISSATLAIVL 3636
>sp|Q5SSE9|ABCAD_MOUSE ATP-binding cassette sub-family A member 13 OS=Mus musculus GN=Abca13
PE=2 SV=1
Length = 5034
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 126/253 (49%), Gaps = 24/253 (9%)
Query: 5 YNRSTDVTGNLTRMEQAFFTVLQFFCGNTSARHTLEEYKNNKCIDFNKIVPYNDSATAEN 64
Y R D N +E F L N S+ L+ ++ + +D T E
Sbjct: 3369 YGRMLDKMFN--HVEAGHFRFLGGMLANLSSCVVLDRFQAVETVD-----------TLET 3415
Query: 65 DAFLRMDNNTLWALINFT--------QPGYDKLKPTLTYSIRMSTTLIGDT-YISDHFYT 115
A M N+ A I F + KL P +TY+IR + T I + +
Sbjct: 3416 KAHELMQQNSFLASIIFNSSLRHRHIRSAPHKLPPHVTYTIRTNVLYSMRTDMIKNPSWK 3475
Query: 116 LDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKS-TPGIVLQQFPYPCYIEDQFIK 174
P++ P KY + F LQDM+E++II TG++S P Q PYPC+ D F+
Sbjct: 3476 FHPQNLPAGGFKY-NYIFVPLQDMIERAIIVVQTGQESLEPTTQAQAAPYPCHTSDLFLN 3534
Query: 175 AVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMI 234
V FPL M+L+W+ A A + + +VYE++ +++E MR+MGL +H+ +WF++++ +
Sbjct: 3535 NVGFFFPLIMMLTWMVAVASMVRKLVYEREIQIEEYMRMMGLHPTIHFLSWFLENMATLA 3594
Query: 235 ITAVLLSLLLVIT 247
+++ L+++L ++
Sbjct: 3595 LSSAALAVILKMS 3607
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 156 GIVLQQFPYPCYI--EDQFIKAVSK-TFPLFMVLSWVFACAMICKSIVYEKQERLKEMMR 212
GI L PY + ED+ ++++ + L +VL + A I S+V ++ K +
Sbjct: 4405 GITLYSHPYGGALLNEDRILESIRQCGVALCIVLGFSILSASIGSSVVRDRVTGAKRLQH 4464
Query: 213 VMGLSNGVHWTAWFIDSIVVMIITAVL 239
+ GL + +W F+ ++ +++ L
Sbjct: 4465 ISGLGHRTYWLINFLYDMLFYLVSVCL 4491
>sp|Q86UK0|ABCAC_HUMAN ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12
PE=1 SV=3
Length = 2595
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 45 NKCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQP-------GYDK----LKPTL 93
+ C+ +++I E +A +N L+ + F P GYD L P +
Sbjct: 922 SSCVLYDRIQAAKTIDEMEREAKRLYKSNELFGSVIFKLPSNRSWHRGYDSGNVFLPPVI 981
Query: 94 TYSIRMSTTLIGDTY-ISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRK 152
Y+IRMS T + + P + P ++ Y F YLQD +E++II+ TGR
Sbjct: 982 KYTIRMSLKTAQTTRSLRTKIWAPGPHNSPSHNQIY-GRAFIYLQDSIERAIIELQTGRN 1040
Query: 153 STP-GIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMM 211
S + +Q PYPC+++D F+ +VS + P+ ++++WV A K +VYEK RL E M
Sbjct: 1041 SQEIAVQVQAIPYPCFMKDNFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHEYM 1100
Query: 212 RVMGLSNGVHWTAWFIDSI 230
++MG+++ H+ AW I+S+
Sbjct: 1101 KMMGVNSCSHFFAWLIESV 1119
>sp|Q8R420|ABCA3_MOUSE ATP-binding cassette sub-family A member 3 OS=Mus musculus GN=Abca3
PE=2 SV=3
Length = 1704
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 117 DPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTP-----GIVLQQFPYPCYIEDQ 171
+P S + YI GF +Q V+++I++ H + ++ ++FP+P YI D
Sbjct: 195 EPSSPDGGEPGYIREGFLAMQHAVDKAIMRYHANTSAQQLFQKLMVITKRFPFPPYISDP 254
Query: 172 FIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIV 231
F+ A+ PL ++LS+ + I +++V EK+++LKE MR+MGL++ +HW+AWF+ +
Sbjct: 255 FLIAIQYQLPLLLMLSFTYTSLTIIRAVVQEKEKKLKEYMRMMGLNSWLHWSAWFLMFFL 314
Query: 232 VMIITAVLLSLLLVI 246
+I ++LL +
Sbjct: 315 FFLIVVSFMTLLFCV 329
>sp|Q99758|ABCA3_HUMAN ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3
PE=1 SV=2
Length = 1704
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 80/135 (59%), Gaps = 5/135 (3%)
Query: 117 DPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTP-----GIVLQQFPYPCYIEDQ 171
+P S + YI GF +Q V+++I++ H + + +++FPYP +I D
Sbjct: 195 EPTSPDGGEPGYIREGFLAVQHAVDRAIMEYHADAATRQLFQRLTVTIKRFPYPPFIADP 254
Query: 172 FIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIV 231
F+ A+ PL ++LS+ + I +++V EK+ RLKE MR+MGLS+ +HW+AWF+ +
Sbjct: 255 FLVAIQYQLPLLLLLSFTYTALTIARAVVQEKERRLKEYMRMMGLSSWLHWSAWFLLFFL 314
Query: 232 VMIITAVLLSLLLVI 246
++I A ++LL +
Sbjct: 315 FLLIAASFMTLLFCV 329
>sp|Q8CF82|ABCA5_RAT ATP-binding cassette sub-family A member 5 OS=Rattus norvegicus
GN=Abca5 PE=2 SV=1
Length = 1642
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 68/129 (52%), Gaps = 21/129 (16%)
Query: 127 KYITFGFAYLQDMVEQSIIQEHTG------RKSTPGIVLQQFPYPCYIE-DQFIKAVSKT 179
+Y + GF LQ ++ +IIQ T +ST +++ + +E D F + V
Sbjct: 167 QYWSSGFTALQASIDAAIIQLKTNVSLWRELESTKAVIMGE---AAVVEIDTFPRGV--- 220
Query: 180 FPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAV- 238
+++V+++ + IV EK++RLKE +++MGL + W +W V++ T++
Sbjct: 221 ILIYLVIAFSPFGYFLAIHIVAEKEKRLKEFLKIMGLHDTAFWLSW------VLLYTSLI 274
Query: 239 -LLSLLLVI 246
L+SLL+ +
Sbjct: 275 FLMSLLMAV 283
>sp|Q9STT7|AB5A_ARATH ABC transporter A family member 5 OS=Arabidopsis thaliana GN=ABCA5
PE=3 SV=2
Length = 936
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 32/213 (15%)
Query: 39 LEEYKNNKCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQPGYDKLKPTLT---Y 95
LE +K +C++ + N+S N+ F L +IN YD + +
Sbjct: 218 LEFHKEVRCVEGLNLW-RNNSIEISNEIFKGYRQGNLEEIINEVAAAYDLMDTDINNFNV 276
Query: 96 SIRMSTTLIGDTYISDHFYTLDPRSRPLYDLKYITF----GFAYLQDMVEQSIIQEHTGR 151
+I ++T GD Y PRS L Y+ F G L D V++ QE R
Sbjct: 277 TIWYNSTYKGDLRDRRVKYVRVPRSVNLVSNAYLEFLQGSGTKMLFDFVKEMPKQETRLR 336
Query: 152 KSTPGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMM 211
++ S P+F + ++ S+VYEKQ+ L+ +M
Sbjct: 337 ---------------------LEMASLIGPIFFTWVILLLFPVMLTSLVYEKQQHLRIIM 375
Query: 212 RVMGLSNGVHWT---AWFIDSIVVMIITAVLLS 241
++ GL +G +W A+F+ +V II ++
Sbjct: 376 KMHGLGDGPYWMITYAYFLAISIVYIICLMIFG 408
>sp|Q8WWZ7|ABCA5_HUMAN ATP-binding cassette sub-family A member 5 OS=Homo sapiens GN=ABCA5
PE=2 SV=2
Length = 1642
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 29/169 (17%)
Query: 90 KPTLTYSIRMSTTLIGDTYISDHFYTLDPR---SRPLYDLKYITFGFAYLQDMVEQSIIQ 146
K +++Y +R +I + I +D R S+ +Y + GF LQ ++ +IIQ
Sbjct: 132 KDSMSYELRFFPDMIPVSSI-----YMDSRAGCSKSCEAAQYWSSGFTVLQASIDAAIIQ 186
Query: 147 EHTG------RKSTPGIVLQQFPYPCYIE-DQFIKAVSKTFPLFMVLSWVFACAMICKSI 199
T +ST +++ + +E D F + V +++V+++ + I
Sbjct: 187 LKTNVSLWKELESTKAVIMGE---TAVVEIDTFPRGV---ILIYLVIAFSPFGYFLAIHI 240
Query: 200 VYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAV--LLSLLLVI 246
V EK++++KE +++MGL + W +W V++ T++ L+SLL+ +
Sbjct: 241 VAEKEKKIKEFLKIMGLHDTAFWLSW------VLLYTSLIFLMSLLMAV 283
>sp|Q84K47|AB2A_ARATH ABC transporter A family member 2 OS=Arabidopsis thaliana GN=ABCA2
PE=2 SV=1
Length = 983
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 136 LQDMVEQSIIQEHTGRKSTPGIV-LQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAM 194
LQ E+ I + G + +V ++FP+P + I A+ P F + +F +
Sbjct: 186 LQIAAEREIARSLIGDPNFNWVVGFKEFPHPTI---EAIVALDTIGPTFFLAVAMFGFVL 242
Query: 195 ICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSL 242
S++ EK+ +L++ M +MG+ + +W +W ++ I+A+L L
Sbjct: 243 QISSLITEKELKLRQAMTMMGVFDTAYWLSWLTWEGILTAISALLTVL 290
>sp|Q9FLT8|AB12A_ARATH ABC transporter A family member 12 OS=Arabidopsis thaliana
GN=ABCA12 PE=3 SV=1
Length = 917
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 181 PLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWT---AWFIDSIVVMIITA 237
PLF + +I S+VYEKQERL+ +M++ GL +G +W A+F+ ++ +I+
Sbjct: 329 PLFFTWVVLLLFPVILTSLVYEKQERLRIIMKMHGLGDGPYWMISYAYFLTISMLYVISL 388
Query: 238 V 238
V
Sbjct: 389 V 389
>sp|Q9FKF2|AB11A_ARATH ABC transporter A family member 11 OS=Arabidopsis thaliana
GN=ABCA11 PE=3 SV=1
Length = 953
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 136 LQDMVEQSIIQEHTGRKSTP-GIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAM 194
LQ E+ I + G + G+ ++F P I + A+S P+F + +F +
Sbjct: 186 LQVAAEREIARSLLGDPNFGWGLGFKEFARPAIITET-TSALSVMGPVFFLAFSMFGFVL 244
Query: 195 ICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLLVI 246
++V EK+ +L++ M +MG+ + +W +W ++ +++++ L L +I
Sbjct: 245 QLGALVTEKELKLRQAMTMMGVYDSAYWLSWLTWEGILTLVSSLFLVLFGMI 296
>sp|Q9FLT5|AB9A_ARATH ABC transporter A family member 9 OS=Arabidopsis thaliana GN=ABCA9
PE=3 SV=1
Length = 950
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 159 LQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSN 218
++F P + I A P+F + +F + S+V EK+ +L+E M MG+
Sbjct: 210 FKEFARPAIGGEVIISAFYLMGPVFFLAFSMFGFVLQLGSVVTEKELKLREAMTTMGVYE 269
Query: 219 GVHWTAWFIDSIVVMIITAVLLSLL 243
+W +W I ++ ++++ L L
Sbjct: 270 SAYWLSWLIWEGILTFVSSLFLVLF 294
>sp|Q8T6J0|ABCA7_DICDI ABC transporter A family member 7 OS=Dictyostelium discoideum
GN=abcA7 PE=3 SV=1
Length = 839
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 160 QQFPYPCYIEDQFIK-AVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSN 218
QQF + F A+S PLFM SIVYEKQE+L+++ +MGL
Sbjct: 234 QQFDIASLLGGSFFPFALSFVLPLFMY------------SIVYEKQEKLRDLSLMMGLKM 281
Query: 219 GVHWTAWFIDSIVVMIITAVLLSLL 243
+W FI + + ++ ++SL+
Sbjct: 282 RNYWIMTFIFNFLTYVVIVSVISLI 306
>sp|Q8T6J2|ABCA5_DICDI ABC transporter A family member 5 OS=Dictyostelium discoideum
GN=abcA5 PE=3 SV=1
Length = 1662
Score = 40.0 bits (92), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 92 TLTYSIRMSTTLIGDTYISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGR 151
+ YSIR+ + + D+ + + Y+T +AY+Q ++Q+I + G
Sbjct: 157 SFKYSIRLDSNSVLDSN--------KVKDNGIDSSDYLTKNWAYIQIAMDQAIFG-YFGL 207
Query: 152 KSTPGIVLQQFPYPCYIE--DQFIKAVSKTF----PLFMVLSWVFACAMICKSIVYEKQE 205
I Q++P P Y+E ++I F +F+ + + + +V EK+
Sbjct: 208 DYKLVINGQRYPDP-YVELWQKWINGRESVFKSAGSVFVSAALLIFTFRLVTELVVEKET 266
Query: 206 RLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLLVI 246
+++E M +MGL+ ++ +W I S+V TA+ + L++++
Sbjct: 267 KIREGMSIMGLNQYCYFISWIITSLV----TALPIDLIIIV 303
Score = 30.8 bits (68), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 31/192 (16%)
Query: 51 NKIVPYNDSATAENDAFLRMDNNT--------LWALINFTQ---PGYDKLKPTLTYSIRM 99
N IVP + T F + +N+ L INF Q Y + ++ ++I +
Sbjct: 921 NDIVPIQLAGTTSEFDFNKFLSNSPYFNQFQYLNNSINFNQYLINNYKQSSGSINFTIPL 980
Query: 100 STTLIGDTYISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTPGIVL 159
S++LI +T T L++ YI + +++ ++++ H G GI
Sbjct: 981 SSSLINNT-------TKVISYNSLFNFNYI-HSWPVHVNLINDALLRNHNG----IGIEC 1028
Query: 160 QQFPYPCYIEDQFIKAVSKT-------FPLFMVLSWVFACAMICKSIVYEKQERLKEMMR 212
P+ +I F KA F + M+ + SI E+ R+K ++
Sbjct: 1029 TSLPFD-HILTSFQKASQGMNIQSIVYFIVIMMAGFSLMAGSFAGSISQERTNRIKRLLY 1087
Query: 213 VMGLSNGVHWTA 224
+ G ++W +
Sbjct: 1088 ISGCKKYIYWVS 1099
>sp|Q8T5Z7|ABCA1_DICDI ABC transporter A family member 1 OS=Dictyostelium discoideum
GN=abcA1 PE=2 SV=1
Length = 877
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 78/191 (40%), Gaps = 42/191 (21%)
Query: 58 DSATAENDAFLRMDNNTLW--ALINFTQPGYDKLKPTLTYSIRMSTTLIGDTYISDHFYT 115
+ A +N+ L+MD N+L ++N T P P YSI ++T +
Sbjct: 182 NGAPPKNEPLLKMDGNSLEFNVVVNTTCPNILATCPD--YSIAITTAI------------ 227
Query: 116 LDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTPGIVLQQFPYPCYIEDQFIKA 175
+ IT+ Y Q + + I P I +P Y +Q
Sbjct: 228 ---------EKAVITY---YSQKIRNEKI--------PPPTISYGSNAFPRYPPEQGAAR 267
Query: 176 VSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMII 235
V LF + + + + +EK+ +LK+ M +MGLS +W +WFI S +
Sbjct: 268 VWGG--LFYYCGSMISFIFLLYKVSFEKENKLKQGMVMMGLSVNQYWISWFITSFTI--- 322
Query: 236 TAVLLSLLLVI 246
+L+SL+ +I
Sbjct: 323 -DILISLITII 332
>sp|Q8LPK0|AB8A_ARATH ABC transporter A family member 8 OS=Arabidopsis thaliana GN=ABCA8
PE=2 SV=3
Length = 901
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 181 PLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHW----TAWFIDSIVVMIIT 236
PLF + +I ++VYEKQ+RL+ MM++ GL + +W T + + SI+ M+
Sbjct: 321 PLFFTWVILLLFPVILTTLVYEKQQRLRIMMKMHGLGDVPYWIVSYTYFLLISILYMLCF 380
Query: 237 AVLLSLL 243
A+ SL+
Sbjct: 381 AIFGSLI 387
>sp|Q8T6J5|ABCA2_DICDI ABC transporter A family member 2 OS=Dictyostelium discoideum
GN=abcA2 PE=3 SV=1
Length = 1621
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Query: 54 VPYNDSATAENDAFLRMDNNTLWALINFTQPGYDKLKPTLTYSIRMSTTLIGDTYISDHF 113
+ ND E AF + ++ +++ + F Y+IR+ + + DT +
Sbjct: 111 IEINDQTAME--AFFQNKSDFVFSAVWFNNSALSSGTNPFQYNIRVDSDDVMDT---EEL 165
Query: 114 YTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRKSTPGIVLQQFPYP-CYIEDQF 172
D S Y+ F Q ++Q+I + G T + Q++P P + ++
Sbjct: 166 IKEDDTSDSEV---YVKKRFVATQVAMDQAIFS-YFGLNKTLNVKGQRYPDPWTELWQKW 221
Query: 173 IKAVSKTF----PLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFID 228
I+ F +F+ + + + +V EK+ +++E M++MGL++ ++ +W I
Sbjct: 222 IQGRDGIFKDAGSVFITAALMIFGFRLITDLVIEKETKIRESMKMMGLNDLAYFISWMIT 281
Query: 229 SIVVMIITAVLLSLLL 244
S+V + +++S++L
Sbjct: 282 SLVTALPVNLIISIIL 297
>sp|Q9FLT4|AB10A_ARATH ABC transporter A family member 10 OS=Arabidopsis thaliana
GN=ABCA10 PE=1 SV=2
Length = 909
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 181 PLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWT---AWFIDSIVVMIITA 237
PLF + +I S+VYEKQERL+ +M++ GL G +W A+F+ + +I+
Sbjct: 326 PLFFTWVVLLLFPVILTSLVYEKQERLRIIMKMHGLGIGPYWMISYAYFLTLSMFYVISL 385
Query: 238 VLLS 241
V+
Sbjct: 386 VIFG 389
>sp|Q9STT8|AB4A_ARATH ABC transporter A family member 4 OS=Arabidopsis thaliana GN=ABCA4
PE=3 SV=2
Length = 937
Score = 38.5 bits (88), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 30/175 (17%)
Query: 57 NDSATAENDAFLRMDNNTLWALINFTQPGYDKL---KPTLTYSIRMSTTLIGDTYISDHF 113
N+S ++ F +IN YD L + +I +++ G+ + D
Sbjct: 234 NNSVEVNDEIFKGYRQGNHEEIINEVAAAYDLLDTDRNKFNVTIWYNSSYKGNFKVQDRR 293
Query: 114 --YTLDPRSRPLYDLKYITF----GFAYLQDMVEQSIIQEHTGRKSTPGIVLQQFPYPCY 167
Y PRS + Y+ F G L D V++ QE R
Sbjct: 294 VKYVRVPRSVNMVSNAYLRFLRGPGTKMLFDFVKEMPKQESMLR---------------- 337
Query: 168 IEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHW 222
+ S P+F+ V +I S+VYEKQ+ L+ +M++ GL +G +W
Sbjct: 338 -----VDIASVIGPIFLTWVIVLLFPVILNSLVYEKQQHLRIIMKMHGLGDGPYW 387
>sp|Q55BC0|ABCA8_DICDI ABC transporter A family member 8 OS=Dictyostelium discoideum
GN=abcA8 PE=3 SV=1
Length = 837
Score = 38.1 bits (87), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 167 YIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWF 226
+IE + VS LF + + + + + +EK++ LK+ M +MGLS ++W +W
Sbjct: 236 FIEYSSVNVVSLFGGLFYYCAIMISFIFLLYKVAFEKEKNLKQGMVMMGLSRSMYWLSWV 295
Query: 227 IDS 229
I S
Sbjct: 296 ITS 298
>sp|Q8T6J1|ABCA6_DICDI ABC transporter A family member 6 OS=Dictyostelium discoideum
GN=abcA6 PE=3 SV=1
Length = 1631
Score = 38.1 bits (87), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 128 YITFGFAYLQDMVEQSIIQEHTGRKSTPGIVLQQFPYPCYIE---------DQFIKAVSK 178
Y+ FA +Q ++Q+I + G I + +P P Y E D IK+
Sbjct: 185 YLNDNFASIQVAMDQAIFG-YFGLDMVLNISGRHYPDP-YTELWQEWITGRDAIIKSAGS 242
Query: 179 TFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAV 238
F ++ + F + +V EK+ ++ E MR+M L++ ++++W I S +IT++
Sbjct: 243 VFITAALMMFSFR---LVTDVVIEKETKIVEAMRMMSLNSLAYFSSWIITS----LITSL 295
Query: 239 LLSLLLVI 246
++LL+V+
Sbjct: 296 PVTLLIVV 303
>sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7 OS=Arabidopsis thaliana GN=ABCA7
PE=1 SV=2
Length = 935
Score = 38.1 bits (87), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 181 PLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWT---AWFIDSIVVMII 235
PLF + +I S+VYEKQ+ L+ +M++ GL +G +W A+F+ V+ +I
Sbjct: 344 PLFFTWVILLLFPVILSSLVYEKQQHLRIIMKMHGLGDGPYWMISYAYFLTISVLYVI 401
>sp|Q8K441|ABCA6_MOUSE ATP-binding cassette sub-family A member 6 OS=Mus musculus GN=Abca6
PE=2 SV=2
Length = 1624
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 127 KYITFGFAYLQDMVEQSIIQEHTGRK------STPGIVLQQFPYPCYIEDQFIKAVSKTF 180
KY GF LQ + II+ T S GI ++ P FI +
Sbjct: 169 KYWERGFVALQTAINAGIIEVTTNHSVMEELMSIDGINMKTLP--------FIPRDLSDY 220
Query: 181 PLFMVLSWVFACAMI--CKSIVYEKQERLKEMMRVMGLSNGVHWTAW 225
+F++ ++ + I S V +++++ KE+M+VMGL + W +W
Sbjct: 221 EIFILFCLLYFSSFIYFASSNVTKERKQCKEVMKVMGLQDSAFWLSW 267
>sp|Q1PEH6|AB3A_ARATH ABC transporter A family member 3 OS=Arabidopsis thaliana GN=ABCA3
PE=2 SV=3
Length = 932
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 181 PLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHW 222
P+F + +I S+VYEKQ+RL+ +M++ GL +G +W
Sbjct: 344 PIFFTWVILLLLPVILNSLVYEKQQRLRIIMKMHGLGDGPYW 385
>sp|Q9STT6|AB6A_ARATH ABC transporter A family member 6 OS=Arabidopsis thaliana GN=ABCA6
PE=3 SV=2
Length = 926
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 72/191 (37%), Gaps = 29/191 (15%)
Query: 39 LEEYKNNKCIDFNKIVPYNDSATAENDAFLRMDNNTLWALINFTQPGYDKL---KPTLTY 95
LE +K +C+ + N+S ++ F +IN YD L +
Sbjct: 214 LEFHKEVRCVQGLNLW-RNNSLEVNDEIFKGFRKENHEEIINEVAAAYDLLNTDRNKFNV 272
Query: 96 SIRMSTTLIGDTYISDHFYTLDPRSRPLYDLKYITF----GFAYLQDMVEQSIIQEHTGR 151
+I TT GD Y PRS + Y+ F G L D V++ QE R
Sbjct: 273 TIWYYTTYKGDLQDWRVKYVRVPRSVNMVSNAYLQFLRGPGTKILFDFVKEMPKQETRLR 332
Query: 152 KSTPGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMM 211
++ P+F + +I S+VYEKQ+RL+ +M
Sbjct: 333 MDMASLI---------------------GPIFFTWVILLLFPVILTSLVYEKQQRLRIIM 371
Query: 212 RVMGLSNGVHW 222
++ GL + +W
Sbjct: 372 KMHGLGDAPYW 382
>sp|Q7X2H8|CHOX_ARTGO Choline oxidase OS=Arthrobacter globiformis GN=codA PE=1 SV=1
Length = 546
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 71 DNNTLWALINFTQPGYDKLKPTLTYS-----IRMSTTLIGDTYISDHFYTLDPRSRPLYD 125
D NTL T+ G+ L P +T++ +R+ + D + D Y DP +D
Sbjct: 358 DMNTLRHGYPTTENGF-SLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEG---HD 413
Query: 126 LKYITFGFAYLQDMVEQSIIQEHTGRKSTPGIVLQ 160
++ + G +++ Q + E TGR+ +PG+ Q
Sbjct: 414 MRVMVAGIRKAREIAAQPAMAEWTGRELSPGVEAQ 448
>sp|Q54DT1|ABCA9_DICDI ABC transporter A family member 9 OS=Dictyostelium discoideum
GN=abcA9 PE=3 SV=1
Length = 845
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%)
Query: 165 PCYIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTA 224
P Y + I S F + F + SIVYEKQE+L+++ +MGL +W
Sbjct: 225 PYYQQSTTIDIASLLGGSFYPFALSFIMPLFIYSIVYEKQEKLRDLSLMMGLKIRNYWFM 284
Query: 225 WFIDSIVVMIITAVLL 240
+I + ++ I V +
Sbjct: 285 TYIFNFLIYFIIIVFV 300
>sp|Q84M24|AB1A_ARATH ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1
PE=2 SV=2
Length = 1882
Score = 35.0 bits (79), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 158 VLQQFPYPC--YIEDQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMG 215
V++ P+P Y +D+F V L +L ++F + + V+EK+++++E + +MG
Sbjct: 255 VIRMVPFPTREYTDDEFQSIVKSVMGLLYLLGFLFPISRLISYSVFEKEQKIREGLYMMG 314
Query: 216 LSNGVHWTAWFI 227
L + + +WFI
Sbjct: 315 LKDEIFHLSWFI 326
>sp|Q54R52|ABCAA_DICDI ABC transporter A family member 10 OS=Dictyostelium discoideum
GN=abcA10 PE=3 SV=1
Length = 887
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 200 VYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLLVIT 247
V E++ +KE+M+VMGL V+W I + +I +L+ ++L T
Sbjct: 220 VTERKNHIKEVMKVMGLKELVYWVTIIIVQTITNVINILLVMVVLYFT 267
>sp|Q49SP5|TPGAS_POGCB Germacrene A synthase OS=Pogostemon cablin PE=1 SV=1
Length = 554
Score = 34.3 bits (77), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 27/125 (21%)
Query: 17 RMEQAFFTVLQFFCGNTSARHTL-----EEYKNN-----KCIDFNKIVPYNDSATAENDA 66
++E A F L F ARH + EE+KN +DFN + + +E
Sbjct: 195 QVEHALFQHLHFGIPRVEARHFITFYEEEEHKNEMLLRFAKLDFNALQALHKEELSEISK 254
Query: 67 FL--------------RMDNNTLWALINFTQPGYDKLKPTLTYSIRMSTTLIGDTYISDH 112
+ R+ + WA+ + QP Y + + LT +I M T ++ DTY D
Sbjct: 255 WWKDLDLISKLPYARDRVVESYFWAVGVYYQPKYSRARIMLTKTIAM-TAILDDTY--DS 311
Query: 113 FYTLD 117
+ TL+
Sbjct: 312 YGTLE 316
>sp|Q54BT5|ABCA3_DICDI ABC transporter A family member 3 OS=Dictyostelium discoideum
GN=abcA3 PE=3 SV=1
Length = 1702
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Query: 93 LTYSIRMSTTLIGDTYISDHFYTLDPRSRPLYDLKYITFGFAYLQDMVEQSIIQEHTGRK 152
L YSI + Y +D+ + PRS L++ F +Q V+Q+I
Sbjct: 152 LKYSISVDAD-----YTNDNNIQISPRSDSQIYLRHY---FTQIQTAVDQAIFMAQN--V 201
Query: 153 STPGIVL-QQFPYPCYIE------DQFIKAVSKTFPLFMVLSWVFACAMICKSIVYEKQE 205
P +V Q+FP P YI D + +T +F+ + ++V EK+
Sbjct: 202 EIPMVVTGQRFPNP-YIHLWQTWTDGRNMILKETGGIFITAAIFVGLFTTITNMVMEKES 260
Query: 206 RLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLL 244
++ E M++MGL + ++ + I S +I + +++ ++L
Sbjct: 261 KILEAMKIMGLHSLPYYVSIAISSCYTIIPSTIIVIVVL 299
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 180 FPLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVL 239
F + + ++ A +I E+ R+K ++ + GL V+W + I V+ I +
Sbjct: 1034 FIILTLAAFALVVASHAGNIAQERAARIKRLLYISGLKKYVYWLSNLIWDYVLTFIMVIF 1093
Query: 240 LSLLLVI 246
L++++VI
Sbjct: 1094 LAVVVVI 1100
>sp|Q555Z5|ABCA4_DICDI ABC transporter A family member 4 OS=Dictyostelium discoideum
GN=abcA4 PE=3 SV=1
Length = 1615
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 138 DMVEQSIIQEHTGRK-STPGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVL-SWVFACAMI 195
+ V+ I++ TG++ T + + P + + V+ F + + L S+ A
Sbjct: 984 NFVDSEILRSVTGKRIQTTSLPFEHIQSPLEVASLDVNFVAIVFFIILTLASFSLIAASH 1043
Query: 196 CKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLLV 245
+I +E+ R+K ++ + GL ++W + I + I + L+++++
Sbjct: 1044 AGNISHERSTRVKRLLYISGLRKSIYWLSNLIWDYLQTFILVIFLTIVII 1093
>sp|O94911|ABCA8_HUMAN ATP-binding cassette sub-family A member 8 OS=Homo sapiens GN=ABCA8
PE=1 SV=3
Length = 1581
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 188 WVFACAMICKSIVY-------EKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLL 240
++F+C + S +Y +++R+K +M +MGL + W +W + + I A+ L
Sbjct: 225 YLFSCIISFSSFIYYASVNVTRERKRMKALMTMMGLRDSAFWLSWGLLYAGFIFIMALFL 284
Query: 241 SLLL 244
+L++
Sbjct: 285 ALVI 288
>sp|Q8WWZ4|ABCAA_HUMAN ATP-binding cassette sub-family A member 10 OS=Homo sapiens
GN=ABCA10 PE=2 SV=3
Length = 1543
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 20/131 (15%)
Query: 124 YDLKYITFGFAYLQDMVEQSIIQ---EHTGRKSTPGIVLQQFPYPCYIEDQFIKAVSKTF 180
Y KY GF Q + +II+ H+ + ++ P +I I
Sbjct: 79 YLAKYWLKGFVAFQAAINAAIIEVTTNHSVMEELTSVIGINMKIPPFISKGEI------- 131
Query: 181 PLFMVLSWVFACAMICKSIVY-------EKQERLKEMMRVMGLSNGVHWTAWFIDSIVVM 233
M + F C + S +Y ++ + K++M VMGL W +W + I +
Sbjct: 132 ---MNEWFHFTCLVSFSSFIYFASLNVARERGKFKKLMTVMGLRESAFWLSWGLTYICFI 188
Query: 234 IITAVLLSLLL 244
I ++ ++L++
Sbjct: 189 FIMSIFMALVI 199
>sp|Q8K449|ABCA9_MOUSE ATP-binding cassette sub-family A member 9 OS=Mus musculus GN=Abca9
PE=1 SV=2
Length = 1623
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 132 GFAYLQDMVEQSIIQ---EHTGRKSTPGIVLQQFPYPCYIEDQFIKAVSKTFPLFMVLSW 188
GF Q + II+ H+ + ++ P +I + + F F V+S+
Sbjct: 177 GFVAFQAAINAGIIEMITNHSVMEELMSVIGSNMKMPPFIAQGGV--ATDFFIFFCVISF 234
Query: 189 VFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAWFIDSIVVMIITAVLLSLLL 244
+ +I E+Q + +M +MGL W +W + +++ AVL+SL++
Sbjct: 235 SSLIYYLSVNITQERQ-YMTTLMAMMGLRESAFWLSWSLMYAGFILVVAVLMSLIV 289
>sp|Q8N139|ABCA6_HUMAN ATP-binding cassette sub-family A member 6 OS=Homo sapiens GN=ABCA6
PE=1 SV=2
Length = 1617
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 127 KYITFGFAYLQDMVEQSIIQEHTGRK------STPGIVLQQFPYPCYIEDQFIKAVSKTF 180
KY GF LQ + +II+ T S I ++ P+ I + ++ F
Sbjct: 169 KYWNRGFVALQTAINTAIIEITTNHPVMEELMSVTAITMKTLPF---ITKNLLH--NEMF 223
Query: 181 PLFMVLSWVFACAMICKSIVYEKQERLKEMMRVMGLSNGVHWTAW 225
LF +L + I ++ E+++ K +M++MGL + W +W
Sbjct: 224 ILFFLLHFSPLVYFISLNVTKERKKS-KNLMKMMGLQDSAFWLSW 267
>sp|G1DGI7|LASYN_SELML (13E)-labda-7,13-dien-15-ol synthase OS=Selaginella moellendorffii
GN=SELMODRAFT_120716 PE=1 SV=2
Length = 750
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 28 FFCGNTSARHTLEEYKNNKCIDFNKIV 54
FFCG + ++H ++E KN++C+ ++
Sbjct: 616 FFCGESISKHLMQEIKNSRCLQLTCLI 642
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,962,974
Number of Sequences: 539616
Number of extensions: 3527066
Number of successful extensions: 9489
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9406
Number of HSP's gapped (non-prelim): 71
length of query: 247
length of database: 191,569,459
effective HSP length: 114
effective length of query: 133
effective length of database: 130,053,235
effective search space: 17297080255
effective search space used: 17297080255
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)