Query psy7372
Match_columns 352
No_of_seqs 280 out of 1280
Neff 6.6
Searched_HMMs 13730
Date Fri Aug 16 16:35:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7372.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7372hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jkwa1 a.74.1.1 (A:11-161) Cy 100.0 9.3E-36 6.8E-40 256.6 18.2 148 34-181 1-151 (151)
2 d1jkwa2 a.74.1.1 (A:162-287) C 100.0 1E-29 7.3E-34 212.6 12.7 124 182-306 1-125 (126)
3 d2ivxa1 a.74.1.1 (A:7-149) Cyc 99.9 6.1E-28 4.5E-32 204.9 12.8 127 32-180 3-143 (143)
4 d2i53a1 a.74.1.1 (A:14-157) Cy 99.9 1.1E-27 8.4E-32 203.8 11.7 128 31-180 8-144 (144)
5 d2cchb1 a.74.1.1 (B:181-308) C 99.6 3.3E-15 2.4E-19 123.7 10.2 102 70-179 25-127 (128)
6 d2i53a2 a.74.1.1 (A:158-267) C 99.6 1.3E-15 9.2E-20 123.3 7.4 95 181-278 1-101 (110)
7 d1bu2a1 a.74.1.1 (A:22-148) Vi 99.6 1E-14 7.6E-19 120.7 11.8 102 70-179 25-127 (127)
8 d1g3nc1 a.74.1.1 (C:16-147) Vi 99.6 8.3E-15 6.1E-19 122.0 10.7 102 70-179 30-132 (132)
9 d2ivxa2 a.74.1.1 (A:150-262) C 99.5 1.2E-14 9.1E-19 117.9 10.5 91 181-278 1-95 (113)
10 d1f5qb1 a.74.1.1 (B:6-146) Vir 99.5 1.4E-14 1E-18 122.0 10.6 106 70-179 32-140 (141)
11 d1w98b2 a.74.1.1 (B:88-227) G1 99.5 2.5E-14 1.8E-18 120.2 11.3 102 70-179 37-140 (140)
12 d1vola1 a.74.1.2 (A:113-207) T 98.9 3.6E-09 2.6E-13 82.2 10.8 89 85-179 7-95 (95)
13 d1aisb1 a.74.1.2 (B:1108-1205) 98.8 1.9E-08 1.4E-12 78.3 11.6 88 83-176 5-92 (98)
14 d1aisb2 a.74.1.2 (B:1206-1300) 98.6 1.2E-07 8.9E-12 73.3 9.4 89 85-179 5-93 (95)
15 d1vola2 a.74.1.2 (A:208-316) T 98.3 1E-06 7.3E-11 69.7 8.1 67 85-153 6-72 (109)
16 d2cchb2 a.74.1.1 (B:309-432) C 98.2 5.9E-07 4.3E-11 72.9 4.6 89 181-278 1-90 (124)
17 d2ivxa2 a.74.1.1 (A:150-262) C 96.6 0.0031 2.3E-07 49.5 7.6 58 85-144 5-63 (113)
18 d1vola2 a.74.1.2 (A:208-316) T 95.5 0.017 1.2E-06 44.4 7.2 60 181-246 2-61 (109)
19 d1aisb2 a.74.1.2 (B:1206-1300) 95.1 0.03 2.2E-06 41.8 7.3 59 182-246 2-60 (95)
20 d2i53a2 a.74.1.1 (A:158-267) C 95.1 0.018 1.3E-06 44.4 6.0 56 86-143 6-65 (110)
21 d1vola1 a.74.1.2 (A:113-207) T 93.4 0.1 7.3E-06 38.7 6.8 58 183-246 5-62 (95)
22 d1aisb1 a.74.1.2 (B:1108-1205) 93.2 0.14 9.9E-06 38.1 7.4 58 183-246 5-62 (98)
23 d1jkwa1 a.74.1.1 (A:11-161) Cy 88.8 0.65 4.7E-05 36.8 7.8 58 187-244 50-107 (151)
24 d2ivxa1 a.74.1.1 (A:7-149) Cyc 87.0 0.89 6.5E-05 35.4 7.5 55 187-243 34-88 (143)
25 d2i53a1 a.74.1.1 (A:14-157) Cy 83.7 1.5 0.00011 34.1 7.4 55 187-243 40-94 (144)
26 d2r7ga2 a.74.1.3 (A:644-785) R 83.3 2.2 0.00016 33.9 8.1 69 83-153 15-86 (142)
27 d1jkwa2 a.74.1.1 (A:162-287) C 79.7 1.2 9E-05 34.4 5.3 56 85-140 8-64 (126)
28 d1w98b1 a.74.1.1 (B:228-357) G 55.2 7.6 0.00055 30.1 4.9 33 208-240 34-66 (130)
29 d2cchb1 a.74.1.1 (B:181-308) C 44.9 46 0.0033 24.4 8.2 55 188-244 35-89 (128)
30 d1bu2a1 a.74.1.1 (A:22-148) Vi 34.8 80 0.0058 23.2 10.1 55 188-244 35-89 (127)
31 d1ny9a_ a.181.1.1 (A:) Transcr 26.5 41 0.003 23.7 4.7 60 267-328 8-68 (94)
32 d2cchb2 a.74.1.1 (B:309-432) C 26.0 1.1E+02 0.0077 22.4 7.4 22 119-140 39-60 (124)
33 d1f5qb1 a.74.1.1 (B:6-146) Vir 25.4 1.2E+02 0.009 22.4 8.7 56 186-243 46-101 (141)
34 d1hlva1 a.4.1.7 (A:1-66) DNA-b 23.1 58 0.0042 21.7 4.6 35 70-106 7-45 (66)
35 d1g3nc1 a.74.1.1 (C:16-147) Vi 22.2 1.4E+02 0.01 21.8 8.5 39 206-244 56-94 (132)
36 d2r7ga2 a.74.1.3 (A:644-785) R 21.9 1.3E+02 0.0096 22.9 7.2 43 204-246 31-75 (142)
No 1
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9.3e-36 Score=256.57 Aligned_cols=148 Identities=49% Similarity=0.787 Sum_probs=138.5
Q ss_pred cccCCHHHHHHHHHHHhHHHHHHHhhhcCccccccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Q psy7372 34 GQCSVEAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRF 113 (352)
Q Consensus 34 W~Ft~e~~L~~~R~~~n~~~~~~~~~~~~~~~~~~~~lt~eeE~~l~~~y~~~I~~i~~~l~~~Lp~~V~aTAi~yf~RF 113 (352)
|+|+++++|+++|.++|++++++..+.....++...++|+++|..+|.+|+.+|+++|.+|++.||+.|++||++|||||
T Consensus 1 W~F~~~~~l~~lr~~~n~~~~~~~~~~~~~~~~~~~~l~~~ee~~l~~~~~~~l~~~~~~~k~~l~~~~~~tA~~~~~RF 80 (151)
T d1jkwa1 1 WTFSSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRF 80 (151)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHTSSSCTTCTTSCCHHHHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHHHHHHHHhhcccCcccccCCCHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 99999889999999999999999888777788899999999999999999999999999988779999999999999999
Q ss_pred hccCCcCccChHHHHHHHHHhhhccccCCCCHHHHHhhhcc---chhhhHHHHHHHHHHHHHHcCcccccc
Q psy7372 114 YLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKG---DQQKASDIILNNELLLMQQLKYHLTVH 181 (352)
Q Consensus 114 yl~~S~~~~~p~~I~~tcLfLA~K~EE~~~~i~~~v~~l~~---d~~~~~e~Il~~E~~lL~~L~F~L~v~ 181 (352)
|+++|+++++|++|++||||||||+||+++++++++..+.. +...++++|+.+|+.||++|+|+|.||
T Consensus 81 ~~~~s~~~~~~~li~~acl~LA~K~ee~~~~~~~~~~~~~~~~~~~~~~~~~i~~~E~~iL~~L~f~L~Vh 151 (151)
T d1jkwa1 81 YLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVH 151 (151)
T ss_dssp GGGSCTTTSCHHHHHHHHHHHHHHHTTCCCCHHHHGGGSSSCHHHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred hhcCccccccHHHHHHHHHHHHHHHcccCCCHHHHHHHHHhhcccccccHHHHHHHHHHHHHHcCCeeeeC
Confidence 99999999999999999999999999999999999987652 334678999999999999999999987
No 2
>d1jkwa2 a.74.1.1 (A:162-287) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=1e-29 Score=212.63 Aligned_cols=124 Identities=42% Similarity=0.752 Sum_probs=117.9
Q ss_pred CChHHHHHHHHHhhcc-cCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcccchhhHHHHHhcCCCc
Q psy7372 182 NPYRPVEGFLIDIKTR-SQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHA 260 (352)
Q Consensus 182 ~P~r~L~~~l~~l~~~-~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~~~~~~y~~~~~~~~~~ 260 (352)
||||+|+||++|++++ ++.++.+.+++.||.++||+++||+||+|+|+|||+||+++|++..+.++++|+.+.++.+.+
T Consensus 1 HPyRpl~g~l~dl~~~~~~~~~~~~l~~~a~~~lnds~~Td~~l~y~P~qIalaal~~a~~~~~~~l~~y~~~~~~~~~~ 80 (126)
T d1jkwa2 1 NPYRPFEGFLIDLKTRYPILENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKEN 80 (126)
T ss_dssp CSHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHTTSTHHHHSCHHHHHHHHHHHHHHHHSCCCTTHHHHHTTSCSS
T ss_pred CCCccHHHHHHHHHHhccCcCCHHHHHHHHHHHHHHHHcCCeeeeeCHHHHHHHHHHHHHHHcCCCHHHHHHHHhccccc
Confidence 8999999999999876 567788999999999999999999999999999999999999999999999999999888888
Q ss_pred cccHHHHHHHHHHHHHHHhCcCCCCCHHhHHHHHHHHHHhcCCCCC
Q psy7372 261 NVRLVDLIEAVRKIRTLVSKPIESPSREMFKQLEKRLEKCRNQANN 306 (352)
Q Consensus 261 ~~~l~~l~~~i~~i~~l~~~~~~~~~~~~v~~i~~KL~~c~~p~~~ 306 (352)
.+.+++++++|++|.+++ +++++|++++|+.|++||++|||||..
T Consensus 81 ~~~~~~l~~~i~~i~~l~-~~~~~~~~e~vk~i~kKL~~Crnpe~~ 125 (126)
T d1jkwa2 81 RTCLSQLLDIMKSMRNLV-KKYEPPRSEEVAVLKQKLDRCHSAELA 125 (126)
T ss_dssp SCCTHHHHHHHHHHHHHH-HTCCCCCHHHHHHHHHHHHHHHHSCSC
T ss_pred hhhHHHHHHHHHHHHHHH-HccCCCCHHHHHHHHHHHHHhcCHHhc
Confidence 899999999999999999 999999999999999999999999863
No 3
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=6.1e-28 Score=204.89 Aligned_cols=127 Identities=20% Similarity=0.300 Sum_probs=112.6
Q ss_pred cCcccCCHHHHHHHHHHHhHHHHHHHhhhcCccccccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q psy7372 32 SYGQCSVEAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLK 111 (352)
Q Consensus 32 r~W~Ft~e~~L~~~R~~~n~~~~~~~~~~~~~~~~~~~~lt~eeE~~l~~~y~~~I~~i~~~l~~~Lp~~V~aTAi~yf~ 111 (352)
..|.||+ ++|++. ++..+|+|+++|..+|.++++||+++|.+|+ +|+.|++||++|||
T Consensus 3 ~~w~~t~-~~l~~~-------------------pS~~~gi~~~~E~~~R~~~~~~i~~~~~~l~--l~~~t~~~A~~l~~ 60 (143)
T d2ivxa1 3 SRWFFTR-EQLENT-------------------PSRRCGVEADKELSCRQQAANLIQEMGQRLN--VSQLTINTAIVYMH 60 (143)
T ss_dssp GGGSCCH-HHHHSC-------------------HHHHTTCCHHHHHHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHH
T ss_pred CCCCCCH-HHHHhC-------------------cccccCCCHHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHHHHH
Confidence 3799996 578643 2344589999999999999999999999999 99999999999999
Q ss_pred HHhccCCcCccChHHHHHHHHHhhhccccCCCCHHHHHhhhc------------c--chhhhHHHHHHHHHHHHHHcCcc
Q psy7372 112 RFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIK------------G--DQQKASDIILNNELLLMQQLKYH 177 (352)
Q Consensus 112 RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~~~~i~~~v~~l~------------~--d~~~~~e~Il~~E~~lL~~L~F~ 177 (352)
|||+++|+.++++++|++||||||||+||++++++++++... . .....+++|+.+|..||++||||
T Consensus 61 Rf~~~~s~~~~~~~~va~acl~LA~K~eE~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~E~~iL~~L~Fd 140 (143)
T d2ivxa1 61 RFYMHHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTRELVILETIMLQTLGFE 140 (143)
T ss_dssp HHTTTSCTTTSCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHCTTSCCCCTTSHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHhCCccccCHHHHHHHHHHHHHHhccccccHHHHHHHHHHHhcccchhhhhchhhhHHHHHHHHHHHHHHHHHcCCe
Confidence 999999999999999999999999999999999999987642 0 12347889999999999999999
Q ss_pred ccc
Q psy7372 178 LTV 180 (352)
Q Consensus 178 L~v 180 (352)
|.|
T Consensus 141 l~V 143 (143)
T d2ivxa1 141 ITI 143 (143)
T ss_dssp CCC
T ss_pred eeC
Confidence 976
No 4
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=1.1e-27 Score=203.79 Aligned_cols=128 Identities=20% Similarity=0.249 Sum_probs=112.6
Q ss_pred ccCcccCCHHHHHHHHHHHhHHHHHHHhhhcCccccccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q psy7372 31 QSYGQCSVEAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYL 110 (352)
Q Consensus 31 ~r~W~Ft~e~~L~~~R~~~n~~~~~~~~~~~~~~~~~~~~lt~eeE~~l~~~y~~~I~~i~~~l~~~Lp~~V~aTAi~yf 110 (352)
.-+|.||+ ++|++.+ +..+++++++|..+|..+++||.++|.+|+ +|+.|++||++||
T Consensus 8 ~~~w~fs~-~~l~~tp-------------------s~~~~i~~~~E~~~R~~~~~~i~~~~~~l~--l~~~t~~~A~~~~ 65 (144)
T d2i53a1 8 KPCWYWDK-KDLAHTP-------------------SQLEGLDPATEARYRREGARFIFDVGTRLG--LHYDTLATGIIYF 65 (144)
T ss_dssp SSSCCCCG-GGGGGCH-------------------HHHTTCCHHHHHHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHH
T ss_pred CCCCCcCH-HHHHhCh-------------------hhhcCCChHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHH
Confidence 34799996 5775542 233479999999999999999999999999 9999999999999
Q ss_pred HHHhccCCcCccChHHHHHHHHHhhhccccCCCCHHHHHhhhc---------cchhhhHHHHHHHHHHHHHHcCccccc
Q psy7372 111 KRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIK---------GDQQKASDIILNNELLLMQQLKYHLTV 180 (352)
Q Consensus 111 ~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~~~~i~~~v~~l~---------~d~~~~~e~Il~~E~~lL~~L~F~L~v 180 (352)
||||+++++.++++++|++||||||||+||+++++++++.... ......+++|+.+|..||++|||||.|
T Consensus 66 dRf~~~~~~~~~~~~lva~acl~LA~K~eE~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~i~~~E~~iL~~L~Fdl~V 144 (144)
T d2i53a1 66 HRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQV 144 (144)
T ss_dssp HHHTTTSCTTTSCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHSCHHHHGGGCSCHHHHHHHHHHHHHHHTTTCCCC
T ss_pred HHHHhhCcccchhHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhhhhhhhhchhhHHHHHHHHHHHHHHCCCeeeC
Confidence 9999999999999999999999999999999999999987642 112346789999999999999999976
No 5
>d2cchb1 a.74.1.1 (B:181-308) Cyclin A {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.58 E-value=3.3e-15 Score=123.67 Aligned_cols=102 Identities=20% Similarity=0.272 Sum_probs=90.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccC-CCCHHHH
Q psy7372 70 FLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEF-NLSISQF 148 (352)
Q Consensus 70 ~lt~eeE~~l~~~y~~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~-~~~i~~~ 148 (352)
.+|+. .|....+||.++|..++ ++.+|..+|+.|++||....++...+.+++++||+|+|||+||. +.+++++
T Consensus 25 ~i~~~----~R~~li~W~~~v~~~~~--l~~~t~~lAv~llDr~l~~~~i~~~~~qLi~~~cl~iAsK~ee~~~~~l~~l 98 (128)
T d2cchb1 25 DITNS----MRAILVDWLVEVGEEYK--LQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEF 98 (128)
T ss_dssp SCCHH----HHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCSSCCCHHHH
T ss_pred CCCHH----HHHHHHHHHHHHHHHhC--CChHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHhccCCCHHHH
Confidence 47774 46777889999999999 99999999999999999999999889999999999999999997 5689999
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHcCcccc
Q psy7372 149 VSNIKGDQQKASDIILNNELLLMQQLKYHLT 179 (352)
Q Consensus 149 v~~l~~d~~~~~e~Il~~E~~lL~~L~F~L~ 179 (352)
+.... ...+.++|+++|..||+.|+|++.
T Consensus 99 ~~~~~--~~~t~~~i~~mE~~IL~~L~~~l~ 127 (128)
T d2cchb1 99 VYITD--DTYTKKQVLRMEHLVLKVLTFDLA 127 (128)
T ss_dssp HHHTT--SSSCHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHc--CCCCHHHHHHHHHHHHHHCCCeec
Confidence 87654 235678999999999999999985
No 6
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.3e-15 Score=123.27 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=76.9
Q ss_pred cCChHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcccchhhHH------HHH
Q psy7372 181 HNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYV------TQT 254 (352)
Q Consensus 181 ~~P~r~L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~~~~~~y~------~~~ 254 (352)
.|||++|..|+..++.. .+..+.+.+.||.++||+++|++||.|+|..||+|||++|++..|.+++.+- .||
T Consensus 1 eHP~~~L~~~~~~l~~~--~~~~~~l~q~AW~~lNDs~rT~lcL~~~P~~IA~a~I~lA~~~~~~~ip~~~~~~~~~~W~ 78 (110)
T d2i53a2 1 EHPYQFLLKYAKQLKGD--KNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWW 78 (110)
T ss_dssp CCHHHHHHHHHHTBCSC--HHHHHHHHHHHHHHHHHHTTTTGGGTSCHHHHHHHHHHHHHHHHTCCGGGGBSSCCSSCGG
T ss_pred CCCcHHHHHHHHHhcCc--cccchHHHHHHHHHHHHHhcCCchhccCcHHHHHHHHHHHHHHhCCCCCCcccCcccccHH
Confidence 48999999999887531 1112468899999999999999999999999999999999999998886532 233
Q ss_pred hcCCCccccHHHHHHHHHHHHHHH
Q psy7372 255 LLGQHANVRLVDLIEAVRKIRTLV 278 (352)
Q Consensus 255 ~~~~~~~~~l~~l~~~i~~i~~l~ 278 (352)
..+ .++.+.+++.+++.+|.++|
T Consensus 79 ~~f-~~dvt~e~i~~i~~~il~lY 101 (110)
T d2i53a2 79 EQF-VQDVPVDVLEDICHQILDLY 101 (110)
T ss_dssp GGT-SSSCCHHHHHHHHHHHHTTT
T ss_pred HHH-HccCCHHHHHHHHHHHHHHH
Confidence 333 24578899999999999998
No 7
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=99.56 E-value=1e-14 Score=120.71 Aligned_cols=102 Identities=15% Similarity=0.219 Sum_probs=90.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccC-CCCHHHH
Q psy7372 70 FLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEF-NLSISQF 148 (352)
Q Consensus 70 ~lt~eeE~~l~~~y~~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~-~~~i~~~ 148 (352)
.+|++ .|....+|+.++|..++ ++.+|...|+.|++||...+++...+.+++++||+|+|+|+||. +.+++++
T Consensus 25 ~it~~----~R~~lidWl~~v~~~~~--l~~eTl~lAv~llDryl~~~~i~~~~lqLi~~tcL~IAsK~ee~~~~~l~~l 98 (127)
T d1bu2a1 25 EVTVD----NRTILLTWMHLLCESFE--LDKSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSKIRTVKPMTVSKL 98 (127)
T ss_dssp SSCHH----HHHHHHHHHHHHHHHTT--CCTTHHHHHHHHHHHHTTTSCCCTTTHHHHHHHHHHHHHHHSSSSCCCHHHH
T ss_pred cCCHH----HHHHHHHHHHHHHHHHC--CChHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 46775 56677789999999999 99999999999999999999999999999999999999999997 6789999
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHcCcccc
Q psy7372 149 VSNIKGDQQKASDIILNNELLLMQQLKYHLT 179 (352)
Q Consensus 149 v~~l~~d~~~~~e~Il~~E~~lL~~L~F~L~ 179 (352)
+.... ...+.++|+++|..||++|+||+.
T Consensus 99 ~~~~~--~~~t~~ei~~mE~~IL~~L~~dl~ 127 (127)
T d1bu2a1 99 TYLSC--DCFTNLELINQEKDILEALKWDTE 127 (127)
T ss_dssp HHTTT--TSSCHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHc--CCCCHHHHHHHHHHHHHHcCCCCC
Confidence 87654 235778999999999999999973
No 8
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=99.55 E-value=8.3e-15 Score=122.01 Aligned_cols=102 Identities=17% Similarity=0.306 Sum_probs=89.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccC-CCCHHHH
Q psy7372 70 FLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEF-NLSISQF 148 (352)
Q Consensus 70 ~lt~eeE~~l~~~y~~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~-~~~i~~~ 148 (352)
.+|+. .|....+|+.++|..++ ++.+|...|+.||+||....++...+.+++++||+|+|+|+||. +.+++++
T Consensus 30 ~it~~----~R~~lidWl~~v~~~~~--l~~et~~lAv~llDrfls~~~v~~~~lqLia~tcl~iAsK~ee~~~~~~~~l 103 (132)
T d1g3nc1 30 SLTSH----MRKLLGTWMFSVCQEYN--LEPNVVALALNLLDRLLLIKQVSKEHFQKTGSACLLVASKLRSLTPISTSSL 103 (132)
T ss_dssp SCCHH----HHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHCSSCCCHHHH
T ss_pred cCCHH----HHHHHHHHHHHHHHHhC--CCcchHHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHhcccCCCCHHHH
Confidence 46664 56777789999999999 99999999999999999999998888999999999999999986 6789999
Q ss_pred HhhhccchhhhHHHHHHHHHHHHHHcCcccc
Q psy7372 149 VSNIKGDQQKASDIILNNELLLMQQLKYHLT 179 (352)
Q Consensus 149 v~~l~~d~~~~~e~Il~~E~~lL~~L~F~L~ 179 (352)
+....+ ..+.++|+++|..||++|+|++.
T Consensus 104 ~~~~~~--~~t~~ei~~mE~~IL~~L~w~l~ 132 (132)
T d1g3nc1 104 CYAAAD--SFSRQELIDQEKELLEKLAWRTE 132 (132)
T ss_dssp HHHTTT--CSCHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHcC--CCCHHHHHHHHHHHHHHcCCcCC
Confidence 876543 35678999999999999999973
No 9
>d2ivxa2 a.74.1.1 (A:150-262) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=1.2e-14 Score=117.92 Aligned_cols=91 Identities=14% Similarity=0.084 Sum_probs=76.4
Q ss_pred cCChHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhc-cccccccCHHHHHHHHHHHHHHhcccchhhHH---HHHhc
Q psy7372 181 HNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL-TDACLLFSPSQIALAAVLQSASKLQENLDAYV---TQTLL 256 (352)
Q Consensus 181 ~~P~r~L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~-Td~~L~y~Ps~IAlAal~lA~~~~~~~~~~y~---~~~~~ 256 (352)
.|||++|..|+..++. ...+.+.||.|+||+++ |++||.|+|+.||+|||++|++..|..++... .||..
T Consensus 1 eHPhk~ll~~~k~l~~------~~~l~q~AW~~lnDs~r~T~lcL~~~P~~IA~a~I~LA~~~~~~~~p~~~~~~~Ww~~ 74 (113)
T d2ivxa2 1 EHPHTDVVKCTQLVRA------SKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEY 74 (113)
T ss_dssp CCHHHHHHHHHHHTTC------CHHHHHHHHHHHHHHHHHCCGGGTSCHHHHHHHHHHHHHHHHTCCCCCCTTCCCGGGG
T ss_pred CCCcHHHHHHHHHhCC------ChHHHHHHHHHHHHHhccCCeeeecCcHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHH
Confidence 5999999999998752 46789999999999997 99999999999999999999999888775322 23333
Q ss_pred CCCccccHHHHHHHHHHHHHHH
Q psy7372 257 GQHANVRLVDLIEAVRKIRTLV 278 (352)
Q Consensus 257 ~~~~~~~l~~l~~~i~~i~~l~ 278 (352)
+ +.+.+.+++.+++.+|.++|
T Consensus 75 f-d~~vt~e~i~~i~~~il~lY 95 (113)
T d2ivxa2 75 V-DPTVTLELLDELTHEFLQIL 95 (113)
T ss_dssp T-CSSCCHHHHHHHHHHHHHHH
T ss_pred H-ccCCCHHHHHHHHHHHHHHH
Confidence 3 24578899999999999999
No 10
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=99.53 E-value=1.4e-14 Score=121.99 Aligned_cols=106 Identities=14% Similarity=0.188 Sum_probs=92.6
Q ss_pred CCCHHHH--HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccC-CCCHH
Q psy7372 70 FLSASEE--RVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEF-NLSIS 146 (352)
Q Consensus 70 ~lt~eeE--~~l~~~y~~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~-~~~i~ 146 (352)
+.....+ ..+|...++|+.++|..++ ++.+|+..|+.||+||.....+...+.+++++||+|+|+|+||. +.++.
T Consensus 32 ~~~~~~~it~~~R~~lvdWm~~v~~~~~--l~~etl~lAv~llDrfls~~~i~~~~lqL~a~tcL~IAsK~ee~~~~~~~ 109 (141)
T d1f5qb1 32 GVNVDQHFTSQYRKVLTTWMFCVCKDLR--QDNNVFPLAVALLDELFLSTRIDRENYQSTAAVALHIAGKVRAYMPIKAT 109 (141)
T ss_dssp SSSHHHHHHCSHHHHHHHHHHHHHHHTT--CCTTHHHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHHCSSCCCHH
T ss_pred ccccCccCCHHHHHHHHHHHHHHHHHHC--CChHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcCcccHH
Confidence 3444433 5678899999999999999 99999999999999999999999999999999999999999986 67899
Q ss_pred HHHhhhccchhhhHHHHHHHHHHHHHHcCcccc
Q psy7372 147 QFVSNIKGDQQKASDIILNNELLLMQQLKYHLT 179 (352)
Q Consensus 147 ~~v~~l~~d~~~~~e~Il~~E~~lL~~L~F~L~ 179 (352)
+++....+ ..+.++|+++|..||++|+|.+.
T Consensus 110 ~l~~~~~~--~yt~~ei~~mE~~IL~~L~w~~~ 140 (141)
T d1f5qb1 110 QLAYLCGG--ATTADKLLTLEVKSLDTLSWVAD 140 (141)
T ss_dssp HHHHHHCT--TCCHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHCCccCC
Confidence 99876642 34678999999999999999874
No 11
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.5e-14 Score=120.18 Aligned_cols=102 Identities=23% Similarity=0.384 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhc-cCCcCccChHHHHHHHHHhhhccccC-CCCHHH
Q psy7372 70 FLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYL-NNSVMDYHPKEILVTCVYLACKVEEF-NLSISQ 147 (352)
Q Consensus 70 ~lt~eeE~~l~~~y~~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl-~~S~~~~~p~~I~~tcLfLA~K~EE~-~~~i~~ 147 (352)
.++++ +|....+||.++|..++ ++.+|..+|+.||+||.. +.++...+.+++++||+|+|+|+||. +.++++
T Consensus 37 ~i~~~----~R~~lidW~~~v~~~~~--l~~et~~lAv~llDryl~~~~~v~~~~lqL~a~acL~IAsK~ee~~~~~~~~ 110 (140)
T d1w98b2 37 LLQPK----MRAILLDWLMEVCEVYK--LHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQ 110 (140)
T ss_dssp TCCHH----HHHHHHHHHHHHHHHTT--CBHHHHHHHHHHHHHHHHHCCCCCGGGHHHHHHHHHHHHHHHHCSSCCCHHH
T ss_pred CCCHH----HHHHHHHHHHHHHHHhC--CChHHHHHHHHHHHHHHhccccccHHHHhHHHHHHHHHHHHHcccCCCCHHH
Confidence 46663 68888899999999999 999999999999999987 44577788999999999999999985 778999
Q ss_pred HHhhhccchhhhHHHHHHHHHHHHHHcCcccc
Q psy7372 148 FVSNIKGDQQKASDIILNNELLLMQQLKYHLT 179 (352)
Q Consensus 148 ~v~~l~~d~~~~~e~Il~~E~~lL~~L~F~L~ 179 (352)
++....+ ..+.++|+++|..||++|+|+|.
T Consensus 111 l~~~~~~--~~t~~ei~~mE~~IL~~L~~~Ln 140 (140)
T d1w98b2 111 FAYVTDG--ACSGDEILTMELMIMKALKWRLS 140 (140)
T ss_dssp HHHTTTT--SSCHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHcC--CCCHHHHHHHHHHHHHHCCCcCC
Confidence 9876543 35678999999999999999984
No 12
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.92 E-value=3.6e-09 Score=82.18 Aligned_cols=89 Identities=15% Similarity=0.305 Sum_probs=81.0
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccCCCCHHHHHhhhccchhhhHHHHH
Q psy7372 85 LQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQKASDIIL 164 (352)
Q Consensus 85 ~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~~~~i~~~v~~l~~d~~~~~e~Il 164 (352)
..|.++|..|+ ||..+..+|..+|++.+..+-...-.|..+++||+|+||+.++.|+++.+|...... ...+|.
T Consensus 7 ~~I~~~~~~L~--L~~~i~~~A~~i~~~~~~~~~~~Gr~~~~i~AA~iY~acr~~~~p~t~~eIa~~~~i----~~~~i~ 80 (95)
T d1vola1 7 KEITTMADRIN--LPRNKVDRTNNLFRQAYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRI----SKKEIG 80 (95)
T ss_dssp HHHHHHHHHTT--CCHHHHHHHHHHHHHHHHTCCCTTSCHHHHHHHHHHHHHHHTTCCCCHHHHHTTTCS----CHHHHH
T ss_pred HHHHHHHHHcC--cCHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHcCCCCCHHHHHHHhCC----CHHHHH
Confidence 68999999999 999999999999999999998888999999999999999999999999999987753 345788
Q ss_pred HHHHHHHHHcCcccc
Q psy7372 165 NNELLLMQQLKYHLT 179 (352)
Q Consensus 165 ~~E~~lL~~L~F~L~ 179 (352)
.....|.+.|++++.
T Consensus 81 k~~k~i~~~L~~~v~ 95 (95)
T d1vola1 81 RCFKLILKALETSVD 95 (95)
T ss_dssp HHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHCCcCC
Confidence 999999999988763
No 13
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=98.82 E-value=1.9e-08 Score=78.33 Aligned_cols=88 Identities=14% Similarity=0.247 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccCCCCHHHHHhhhccchhhhHHH
Q psy7372 83 YQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQKASDI 162 (352)
Q Consensus 83 y~~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~~~~i~~~v~~l~~d~~~~~e~ 162 (352)
+-..|.++|..|+ ||..|..+|..++++.+..+....-.|..+++||||+||+.++.|+++.+|+..+..+ ..+
T Consensus 5 a~~~I~~~~~~L~--L~~~i~~~A~~i~k~~~~~~~~~g~~~~~iaaA~iY~Acr~~~~~~t~~eIa~~~~is----~~t 78 (98)
T d1aisb1 5 ALSELDRITAQLK--LPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIARVD----KKE 78 (98)
T ss_dssp HHHHHHHHHHHHT--CCHHHHHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSC----HHH
T ss_pred HHHHHHHHHHHcC--cCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHCCC----HHH
Confidence 4467999999999 9999999999999999998888889999999999999999999999999999887643 357
Q ss_pred HHHHHHHHHHHcCc
Q psy7372 163 ILNNELLLMQQLKY 176 (352)
Q Consensus 163 Il~~E~~lL~~L~F 176 (352)
|......|++.|+.
T Consensus 79 i~k~yk~i~~~L~l 92 (98)
T d1aisb1 79 IGRSYRFIARNLNL 92 (98)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 88999999998874
No 14
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=98.57 E-value=1.2e-07 Score=73.26 Aligned_cols=89 Identities=15% Similarity=0.194 Sum_probs=78.4
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccCCCCHHHHHhhhccchhhhHHHHH
Q psy7372 85 LQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQKASDIIL 164 (352)
Q Consensus 85 ~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~~~~i~~~v~~l~~d~~~~~e~Il 164 (352)
++|.++|..|+ ||..+..+|..+++++....-++...|..++++|+|+||+..+.++++.++...... +..+|-
T Consensus 5 d~I~R~~~~L~--L~~~i~~~A~~i~~~~~~~~~~~Gr~p~~vaAA~iY~a~r~~~~~~t~~eIa~~~~v----s~~tI~ 78 (95)
T d1aisb2 5 DYVNKFADELG--LSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQREVAEVARV----TEVTVR 78 (95)
T ss_dssp GGHHHHHHHHT--CCHHHHHHHHHHHHHHHHTTCCTTSCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTC----CHHHHH
T ss_pred HHHHHHHHHcC--cCHHHHHHHHHHHHHHHHcCCcCCCcHHhHHHHHHHHHHHHcCCCcCHHHHHHHHCC----CHHHHH
Confidence 58999999999 999999999999999998888888999999999999999999999999999887652 234577
Q ss_pred HHHHHHHHHcCcccc
Q psy7372 165 NNELLLMQQLKYHLT 179 (352)
Q Consensus 165 ~~E~~lL~~L~F~L~ 179 (352)
..-..|.+.|+..+-
T Consensus 79 ~~yk~l~~~l~~~~p 93 (95)
T d1aisb2 79 NRYKELVEKLKIKVP 93 (95)
T ss_dssp HHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHhCCCCC
Confidence 888888888887754
No 15
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=1e-06 Score=69.71 Aligned_cols=67 Identities=16% Similarity=0.218 Sum_probs=63.2
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccCCCCHHHHHhhhc
Q psy7372 85 LQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIK 153 (352)
Q Consensus 85 ~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~~~~i~~~v~~l~ 153 (352)
++|.++|..|+ ||..+..+|..+++++.-.+-.+.-.|..++++|+|+||+....+++.+++.....
T Consensus 6 d~i~Rf~s~L~--L~~~i~~~A~~i~~~~~~~~~~~Gr~p~~iaAa~iY~a~r~~~~~~t~~eIa~~~~ 72 (109)
T d1vola2 6 DFMSRFCSNLC--LPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAG 72 (109)
T ss_dssp GTHHHHHHHHT--CCHHHHHHHHHHHHHHHHTTCSTTCCHHHHHHHHHHHHHHTSSSCCCHHHHHHHHT
T ss_pred HHHHHHHHHcC--cCHHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHcCCCCCHHHHHHHHC
Confidence 48999999999 99999999999999999988889999999999999999999999999999988765
No 16
>d2cchb2 a.74.1.1 (B:309-432) Cyclin A {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.18 E-value=5.9e-07 Score=72.89 Aligned_cols=89 Identities=11% Similarity=0.086 Sum_probs=66.2
Q ss_pred cCChHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhcc-ccccccCHHHHHHHHHHHHHHhcccchhhHHHHHhcCCC
Q psy7372 181 HNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLT-DACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQH 259 (352)
Q Consensus 181 ~~P~r~L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~T-d~~L~y~Ps~IAlAal~lA~~~~~~~~~~y~~~~~~~~~ 259 (352)
++|++||..|+.... +....+...|..+++-+++. +.++.|+||+||+||+++|....|.. .|.......
T Consensus 1 PT~~~FL~ry~~~~~-----~~d~~~~~la~Yl~ElsLl~~~~~l~~~PS~lAaaai~lar~~l~~~--~W~~~L~~~-- 71 (124)
T d2cchb2 1 PTVNQFLTQYFLHQQ-----PANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAAFHLALYTVTGQ--SWPESLIRK-- 71 (124)
T ss_dssp CCHHHHHHHHHTTCS-----SCCHHHHHHHHHHHHHHHHCHHHHTTSCHHHHHHHHHHHHHHHHHSC--CSCHHHHHH--
T ss_pred CchhHHHHHHHHHHc-----cCcHHHHHHHHHHHHHHHHhHHHHHccChHHHHHHHHHHHHHHhCCC--CchHHHHHH--
Confidence 578899988764322 12346678899999999886 67999999999999999998876643 465544332
Q ss_pred ccccHHHHHHHHHHHHHHH
Q psy7372 260 ANVRLVDLIEAVRKIRTLV 278 (352)
Q Consensus 260 ~~~~l~~l~~~i~~i~~l~ 278 (352)
.+.+.++|.+++..+.+++
T Consensus 72 t~y~~~~l~~c~~~L~~~~ 90 (124)
T d2cchb2 72 TGYTLESLKPCLMDLHQTY 90 (124)
T ss_dssp HCCCHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHH
Confidence 3467788888888887765
No 17
>d2ivxa2 a.74.1.1 (A:150-262) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.57 E-value=0.0031 Score=49.51 Aligned_cols=58 Identities=17% Similarity=0.342 Sum_probs=49.9
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHhc-cCCcCccChHHHHHHHHHhhhccccCCCC
Q psy7372 85 LQLRDFCKRFSPPMPKVVIGTAFHYLKRFYL-NNSVMDYHPKEILVTCVYLACKVEEFNLS 144 (352)
Q Consensus 85 ~~I~~i~~~l~~~Lp~~V~aTAi~yf~RFyl-~~S~~~~~p~~I~~tcLfLA~K~EE~~~~ 144 (352)
..|..+++.++ ....+.-+|-.|..-.|- ..-...|.|+.|+++|||||+|..+..++
T Consensus 5 k~ll~~~k~l~--~~~~l~q~AW~~lnDs~r~T~lcL~~~P~~IA~a~I~LA~~~~~~~~p 63 (113)
T d2ivxa2 5 TDVVKCTQLVR--ASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIP 63 (113)
T ss_dssp HHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHCCGGGTSCHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHhC--CChHHHHHHHHHHHHHhccCCeeeecCcHHHHHHHHHHHHHHhCCCCC
Confidence 46788888999 899999999999999885 55568999999999999999998776554
No 18
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.52 E-value=0.017 Score=44.44 Aligned_cols=60 Identities=18% Similarity=0.150 Sum_probs=50.7
Q ss_pred cCChHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcccc
Q psy7372 181 HNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQEN 246 (352)
Q Consensus 181 ~~P~r~L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~~~ 246 (352)
-+|-.++..|...|+ + +..+.+.|..+...+.-.++.-.-+|..||+||+|+|++..|..
T Consensus 2 i~~~d~i~Rf~s~L~----L--~~~i~~~A~~i~~~~~~~~~~~Gr~p~~iaAa~iY~a~r~~~~~ 61 (109)
T d1vola2 2 ITTGDFMSRFCSNLC----L--PKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEK 61 (109)
T ss_dssp CCGGGTHHHHHHHHT----C--CHHHHHHHHHHHHHHHHTTCSTTCCHHHHHHHHHHHHHHTSSSC
T ss_pred CCHHHHHHHHHHHcC----c--CHHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHcCCC
Confidence 468889999998875 3 35778899999988877788889999999999999999987664
No 19
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=95.14 E-value=0.03 Score=41.78 Aligned_cols=59 Identities=22% Similarity=0.242 Sum_probs=49.0
Q ss_pred CChHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcccc
Q psy7372 182 NPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQEN 246 (352)
Q Consensus 182 ~P~r~L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~~~ 246 (352)
.|-.++..|...|+ + ++.+.+.|..+.......++.-.-+|..+|+||+|+|++..|..
T Consensus 2 ~P~d~I~R~~~~L~----L--~~~i~~~A~~i~~~~~~~~~~~Gr~p~~vaAA~iY~a~r~~~~~ 60 (95)
T d1aisb2 2 KPTDYVNKFADELG----L--SEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEK 60 (95)
T ss_dssp CGGGGHHHHHHHHT----C--CHHHHHHHHHHHHHHHHTTCCTTSCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHcC----c--CHHHHHHHHHHHHHHHHcCCcCCCcHHhHHHHHHHHHHHHcCCC
Confidence 47788999988775 3 46788899999888776677778999999999999999987664
No 20
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.05 E-value=0.018 Score=44.41 Aligned_cols=56 Identities=18% Similarity=0.394 Sum_probs=44.9
Q ss_pred HHHHHHHHhCCCCC----HHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhccccCCC
Q psy7372 86 QLRDFCKRFSPPMP----KVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNL 143 (352)
Q Consensus 86 ~I~~i~~~l~~~Lp----~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE~~~ 143 (352)
.|..+.+.|+ .. +.+..+|-.|..-.|...-...|.|+.||++|||||+|.-+..+
T Consensus 6 ~L~~~~~~l~--~~~~~~~~l~q~AW~~lNDs~rT~lcL~~~P~~IA~a~I~lA~~~~~~~i 65 (110)
T d2i53a2 6 FLLKYAKQLK--GDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEI 65 (110)
T ss_dssp HHHHHHHTBC--SCHHHHHHHHHHHHHHHHHHTTTTGGGTSCHHHHHHHHHHHHHHHHTCCG
T ss_pred HHHHHHHHhc--CccccchHHHHHHHHHHHHHhcCCchhccCcHHHHHHHHHHHHHHhCCCC
Confidence 4555566665 44 35778999999999988888899999999999999999866544
No 21
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.37 E-value=0.1 Score=38.66 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=44.9
Q ss_pred ChHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcccc
Q psy7372 183 PYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQEN 246 (352)
Q Consensus 183 P~r~L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~~~ 246 (352)
+++.+..+...++ + ++.+...|..+...+.-..+.-.-.|..||+||||+|++..|.+
T Consensus 5 a~~~I~~~~~~L~----L--~~~i~~~A~~i~~~~~~~~~~~Gr~~~~i~AA~iY~acr~~~~p 62 (95)
T d1vola1 5 AFKEITTMADRIN----L--PRNKVDRTNNLFRQAYEQKSLKGRANDAIASACLYIACRQEGVP 62 (95)
T ss_dssp HHHHHHHHHHHTT----C--CHHHHHHHHHHHHHHHHTCCCTTSCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcC----c--CHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHHcCCC
Confidence 3455555555443 3 56788899999988877778888999999999999999987653
No 22
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=93.20 E-value=0.14 Score=38.09 Aligned_cols=58 Identities=12% Similarity=0.108 Sum_probs=45.5
Q ss_pred ChHHHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcccc
Q psy7372 183 PYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQEN 246 (352)
Q Consensus 183 P~r~L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~~~ 246 (352)
.+..+..+...++ + ++.+...|..+...+.-....-.-.|..||+||||+|++..|..
T Consensus 5 a~~~I~~~~~~L~----L--~~~i~~~A~~i~k~~~~~~~~~g~~~~~iaaA~iY~Acr~~~~~ 62 (98)
T d1aisb1 5 ALSELDRITAQLK----L--PRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVP 62 (98)
T ss_dssp HHHHHHHHHHHHT----C--CHHHHHHHHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHcC----c--CHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHcCCC
Confidence 3455666665553 3 56788999999988877777778899999999999999987664
No 23
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.79 E-value=0.65 Score=36.84 Aligned_cols=58 Identities=12% Similarity=0.221 Sum_probs=41.9
Q ss_pred HHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcc
Q psy7372 187 VEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQ 244 (352)
Q Consensus 187 L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~ 244 (352)
...++.++.....+.-+..+...|..++...+...-...|.|..||+||+++|++..+
T Consensus 50 ~~~~l~~~~~~~k~~l~~~~~~tA~~~~~RF~~~~s~~~~~~~li~~acl~LA~K~ee 107 (151)
T d1jkwa1 50 YEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDE 107 (151)
T ss_dssp HHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHGGGSCTTTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHhhcCccccccHHHHHHHHHHHHHHHcc
Confidence 3344444443212223456677888999998888888999999999999999998743
No 24
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.04 E-value=0.89 Score=35.42 Aligned_cols=55 Identities=11% Similarity=0.193 Sum_probs=41.0
Q ss_pred HHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhc
Q psy7372 187 VEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKL 243 (352)
Q Consensus 187 L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~ 243 (352)
.-.|+.++... +.-+......|..+++..+...-+-.+.|..||+||+++|++..
T Consensus 34 ~~~~i~~~~~~--l~l~~~t~~~A~~l~~Rf~~~~s~~~~~~~~va~acl~LA~K~e 88 (143)
T d2ivxa1 34 AANLIQEMGQR--LNVSQLTINTAIVYMHRFYMHHSFTKFNKNIISSTALFLAAKVE 88 (143)
T ss_dssp HHHHHHHHHHH--TTCCHHHHHHHHHHHHHHTTTSCTTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH--cCCCHHHHHHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHHhc
Confidence 33455555543 23345566789999999887777888999999999999999864
No 25
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.73 E-value=1.5 Score=34.13 Aligned_cols=55 Identities=11% Similarity=0.114 Sum_probs=40.3
Q ss_pred HHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhc
Q psy7372 187 VEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKL 243 (352)
Q Consensus 187 L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~ 243 (352)
+..|+.++....++ +......|..+++..+...-.-.+.|..||+||+++|++..
T Consensus 40 ~~~~i~~~~~~l~l--~~~t~~~A~~~~dRf~~~~~~~~~~~~lva~acl~LA~K~e 94 (144)
T d2i53a1 40 GARFIFDVGTRLGL--HYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVE 94 (144)
T ss_dssp HHHHHHHHHHHTTC--CHHHHHHHHHHHHHHTTTSCTTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHhhCcccchhHHHHHHHHHHHHHHhh
Confidence 34555555543223 34555788888888887777788999999999999999864
No 26
>d2r7ga2 a.74.1.3 (A:644-785) Retinoblastoma tumor suppressor domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.25 E-value=2.2 Score=33.86 Aligned_cols=69 Identities=20% Similarity=0.369 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHhc-cCC-cCccChHHHHHHHHHhhhccccCCCCHHHHHhhhc
Q psy7372 83 YQLQLRDFCKRFSPPMP-KVVIGTAFHYLKRFYL-NNS-VMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIK 153 (352)
Q Consensus 83 y~~~I~~i~~~l~~~Lp-~~V~aTAi~yf~RFyl-~~S-~~~~~p~~I~~tcLfLA~K~EE~~~~i~~~v~~l~ 153 (352)
....|..+|.+|+ +. +.+..---+.|..-.. ..+ +.+-|..-++++|+|..||+....++-.+++..-+
T Consensus 15 a~~Rl~~LC~~L~--~~~~~l~~~Iw~~fe~~l~~~t~L~~dRHLDQiilCaiY~i~Kv~~~~~~F~~Ii~~Yr 86 (142)
T d2r7ga2 15 AYLRLNTLCERLL--SEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYK 86 (142)
T ss_dssp HHHHHHHHHHHHC--TTCTTHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHC--cCcHHHHHHHHHHHHHHHHHhHHHHhccchhHHHHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 4467899999997 43 3332222233333322 223 34668889999999999999888888888887643
No 27
>d1jkwa2 a.74.1.1 (A:162-287) Cyclin H (mcs2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.75 E-value=1.2 Score=34.44 Aligned_cols=56 Identities=23% Similarity=0.347 Sum_probs=43.5
Q ss_pred HHHHHHHHHhC-CCCCHHHHHHHHHHHHHHhccCCcCccChHHHHHHHHHhhhcccc
Q psy7372 85 LQLRDFCKRFS-PPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEE 140 (352)
Q Consensus 85 ~~I~~i~~~l~-~~Lp~~V~aTAi~yf~RFyl~~S~~~~~p~~I~~tcLfLA~K~EE 140 (352)
.++.++..... +.-+..+..+|-.|+.+-+.....--|.|..|++|||++|++.-.
T Consensus 8 g~l~dl~~~~~~~~~~~~l~~~a~~~lnds~~Td~~l~y~P~qIalaal~~a~~~~~ 64 (126)
T d1jkwa2 8 GFLIDLKTRYPILENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAG 64 (126)
T ss_dssp HHHHHHHHHCTTCCCHHHHHHHHHHHHHHHTTSTHHHHSCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcCCHHHHHHHHHHHHHHHHcCCeeeeeCHHHHHHHHHHHHHHHcC
Confidence 45555544421 225678889999999998887778889999999999999998754
No 28
>d1w98b1 a.74.1.1 (B:228-357) G1/S-specific cyclin-E1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.16 E-value=7.6 Score=30.08 Aligned_cols=33 Identities=30% Similarity=0.371 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhccccccccCHHHHHHHHHHHHH
Q psy7372 208 PGIDEFLDKMFLTDACLLFSPSQIALAAVLQSA 240 (352)
Q Consensus 208 ~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~ 240 (352)
-.+-.+|+-+.+.--+|.|+-+.||+||+|+-.
T Consensus 34 iq~aqLLDLC~LDi~sl~fsYsvLAAaAl~h~~ 66 (130)
T d1w98b1 34 IQIAELLDLCVLDVDCLEFPYGILAASALYHFS 66 (130)
T ss_dssp HHHHHHHHHHHHSGGGGGSCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhhhhhhcCchHHHHHHHHHHcc
Confidence 344556666666667999999999999999754
No 29
>d2cchb1 a.74.1.1 (B:181-308) Cyclin A {Cow (Bos taurus) [TaxId: 9913]}
Probab=44.93 E-value=46 Score=24.45 Aligned_cols=55 Identities=13% Similarity=0.173 Sum_probs=31.7
Q ss_pred HHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcc
Q psy7372 188 EGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQ 244 (352)
Q Consensus 188 ~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~ 244 (352)
..++..+....+++ ......|-.+++..+...-.-.-....+|+||+++|++...
T Consensus 35 i~W~~~v~~~~~l~--~~t~~lAv~llDr~l~~~~i~~~~~qLi~~~cl~iAsK~ee 89 (128)
T d2cchb1 35 VDWLVEVGEEYKLQ--NETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFEE 89 (128)
T ss_dssp HHHHHHHHHHTTCC--HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCC--hHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHh
Confidence 34555544332332 34445677777655433222333456789999999998643
No 30
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri [TaxId: 10381]}
Probab=34.77 E-value=80 Score=23.17 Aligned_cols=55 Identities=15% Similarity=0.066 Sum_probs=33.2
Q ss_pred HHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcc
Q psy7372 188 EGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQ 244 (352)
Q Consensus 188 ~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~ 244 (352)
..++.++....++. ....-.|..+++..+..--.-.-.-..+|+||+++|++...
T Consensus 35 idWl~~v~~~~~l~--~eTl~lAv~llDryl~~~~i~~~~lqLi~~tcL~IAsK~ee 89 (127)
T d1bu2a1 35 LTWMHLLCESFELD--KSVFPLSVSILDRYLCKKQGTKKTLQKIGAACVLIGSKIRT 89 (127)
T ss_dssp HHHHHHHHHHTTCC--TTHHHHHHHHHHHHTTTSCCCTTTHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHCCC--hHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHh
Confidence 45555554433332 23345677777765433223345567899999999998743
No 31
>d1ny9a_ a.181.1.1 (A:) Transcriptional activator TipA-S {Streptomyces lividans [TaxId: 1916]}
Probab=26.48 E-value=41 Score=23.75 Aligned_cols=60 Identities=12% Similarity=0.031 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhCcCCCCCHHhHHHHHHHHHHhcCCCC-CCCcHHHHHHHhhccCCcchHHH
Q psy7372 267 LIEAVRKIRTLVSKPIESPSREMFKQLEKRLEKCRNQAN-NPDSHIYKERMLESLNDDDESAA 328 (352)
Q Consensus 267 l~~~i~~i~~l~~~~~~~~~~~~v~~i~~KL~~c~~p~~-~~~~~~~~~~~~~~~~~~~~~~~ 328 (352)
.-++.+.+..++ +.+.+|+.+++..+-.+.+..-+-.. .++.+.| +.+-++|.+|+.-..
T Consensus 8 ~~~i~~~la~~~-~~G~~p~s~~vq~lv~~H~~~i~~~~~~~s~e~~-~~Lg~mYv~D~rF~~ 68 (94)
T d1ny9a_ 8 ADELTRRFVALM-DAGEPADSEGAMDAAEDHRQGIARNHYDCGYEMH-TCLGEMYVSDERFTR 68 (94)
T ss_dssp HHHHHHHHHHHH-HHTCCTTCHHHHHHHHHHHHHHHHHSSCCCHHHH-HHHHHHTTSTHHHHH
T ss_pred HHHHHHHHHHHH-HcCCCCCCHHHHHHHHHHHHHHHHhcCCCCHHHH-HHHHHHHcCCHHHHH
Confidence 345556677777 66778888999888888766433222 3455555 568888998875443
No 32
>d2cchb2 a.74.1.1 (B:309-432) Cyclin A {Cow (Bos taurus) [TaxId: 9913]}
Probab=26.03 E-value=1.1e+02 Score=22.37 Aligned_cols=22 Identities=23% Similarity=0.202 Sum_probs=14.9
Q ss_pred cCccChHHHHHHHHHhhhcccc
Q psy7372 119 VMDYHPKEILVTCVYLACKVEE 140 (352)
Q Consensus 119 ~~~~~p~~I~~tcLfLA~K~EE 140 (352)
+..|.|-.+++||++||-++-+
T Consensus 39 ~l~~~PS~lAaaai~lar~~l~ 60 (124)
T d2cchb2 39 YLKYLPSVIAGAAFHLALYTVT 60 (124)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHccChHHHHHHHHHHHHHHhC
Confidence 4566777777777777766533
No 33
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68 [TaxId: 33708]}
Probab=25.42 E-value=1.2e+02 Score=22.42 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=34.8
Q ss_pred HHHHHHHHhhcccCCCCchhHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhc
Q psy7372 186 PVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKL 243 (352)
Q Consensus 186 ~L~~~l~~l~~~~~l~~~~~l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~ 243 (352)
.+..++..+....++. ......|-.+++..+..-..-......+|++|+++|++..
T Consensus 46 ~lvdWm~~v~~~~~l~--~etl~lAv~llDrfls~~~i~~~~lqL~a~tcL~IAsK~e 101 (141)
T d1f5qb1 46 VLTTWMFCVCKDLRQD--NNVFPLAVALLDELFLSTRIDRENYQSTAAVALHIAGKVR 101 (141)
T ss_dssp HHHHHHHHHHHHTTCC--TTHHHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC--hHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 3456666665443443 2334567777776543323344566789999999999864
No 34
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.10 E-value=58 Score=21.72 Aligned_cols=35 Identities=17% Similarity=0.374 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHHHH----HHHHHHHhCCCCCHHHHHHH
Q psy7372 70 FLSASEERVLVRHYQLQ----LRDFCKRFSPPMPKVVIGTA 106 (352)
Q Consensus 70 ~lt~eeE~~l~~~y~~~----I~~i~~~l~~~Lp~~V~aTA 106 (352)
.||.+|-..++.++..- -.++|..|+ +|.+++.+=
T Consensus 7 ~LT~~eK~~ii~~~e~g~k~sq~eIA~~fG--v~~STvs~I 45 (66)
T d1hlva1 7 QLTFREKSRIIQEVEENPDLRKGEIARRFN--IPPSTLSTI 45 (66)
T ss_dssp CCCHHHHHHHHHHHHHCTTSCHHHHHHHHT--CCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcCCcchHHHHHHHhC--CChhHHHHH
Confidence 58999999999999985 357999999 999998764
No 35
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=22.20 E-value=1.4e+02 Score=21.80 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHhcc
Q psy7372 206 LRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQ 244 (352)
Q Consensus 206 l~~~A~~~l~ds~~Td~~L~y~Ps~IAlAal~lA~~~~~ 244 (352)
....|-.+++..+..--.-.-.=..||++|+++|++...
T Consensus 56 t~~lAv~llDrfls~~~v~~~~lqLia~tcl~iAsK~ee 94 (132)
T d1g3nc1 56 VVALALNLLDRLLLIKQVSKEHFQKTGSACLLVASKLRS 94 (132)
T ss_dssp HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHhcc
Confidence 345666666664422111111224689999999998643
No 36
>d2r7ga2 a.74.1.3 (A:644-785) Retinoblastoma tumor suppressor domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.86 E-value=1.3e+02 Score=22.92 Aligned_cols=43 Identities=9% Similarity=-0.038 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHHHh--ccccccccCHHHHHHHHHHHHHHhcccc
Q psy7372 204 DRLRPGIDEFLDKMF--LTDACLLFSPSQIALAAVLQSASKLQEN 246 (352)
Q Consensus 204 ~~l~~~A~~~l~ds~--~Td~~L~y~Ps~IAlAal~lA~~~~~~~ 246 (352)
..+.+..|.++.-++ .|++...-.--||-+.|+|..++..+.+
T Consensus 31 ~~l~~~Iw~~fe~~l~~~t~L~~dRHLDQiilCaiY~i~Kv~~~~ 75 (142)
T d2r7ga2 31 PELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNID 75 (142)
T ss_dssp TTHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhccchhHHHHHHHHHHHHhccCC
Confidence 456677898887765 7889999999999999999999976554
Done!