Your job contains 1 sequence.
>psy7372
MHQFPRGHRSITLCVVKIWTSDPLKFFSEGQSYGQCSVEAELIALREAANQNFILEHRAE
LTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVM
DYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQKASDIILNNELLLMQQLKYHLTV
HNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSA
SKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKIRTLVSKPIESPSREMFKQLEKRLEKC
RNQANNPDSHIYKERMLESLNDDDESAARRYSQLSQKENAILEHMKGISKLS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7372
(352 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0022936 - symbol:CycH "Cyclin H" species:7227 "Dro... 938 3.0e-94 1
UNIPROTKB|E1C948 - symbol:CCNH "Uncharacterized protein" ... 616 3.9e-60 1
UNIPROTKB|E2R5P2 - symbol:CCNH "Uncharacterized protein" ... 602 1.2e-58 1
UNIPROTKB|P51946 - symbol:CCNH "Cyclin-H" species:9606 "H... 598 3.2e-58 1
UNIPROTKB|Q4R7U4 - symbol:CCNH "Cyclin-H" species:9541 "M... 598 3.2e-58 1
ZFIN|ZDB-GENE-050320-13 - symbol:ccnh "cyclin H" species:... 598 3.2e-58 1
UNIPROTKB|C9K506 - symbol:CCNH "Uncharacterized protein" ... 596 5.1e-58 1
RGD|69419 - symbol:Ccnh "cyclin H" species:10116 "Rattus ... 596 5.1e-58 1
UNIPROTKB|F1MG12 - symbol:CCNH "Cyclin-H" species:9913 "B... 594 8.4e-58 1
UNIPROTKB|Q3ZBL9 - symbol:CCNH "Cyclin-H" species:9913 "B... 590 2.2e-57 1
MGI|MGI:1913921 - symbol:Ccnh "cyclin H" species:10090 "M... 590 2.2e-57 1
UNIPROTKB|E2QYZ5 - symbol:CCNH "Uncharacterized protein" ... 540 4.4e-52 1
UNIPROTKB|D6RG18 - symbol:CCNH "Cyclin-H" species:9606 "H... 527 1.1e-50 1
UNIPROTKB|D6RHI7 - symbol:CCNH "Cyclin-H" species:9606 "H... 527 1.1e-50 1
UNIPROTKB|E1BCT0 - symbol:E1BCT0 "Uncharacterized protein... 511 5.2e-49 1
TAIR|locus:2143671 - symbol:CYCH;1 "cyclin H;1" species:3... 352 3.7e-32 1
WB|WBGene00021714 - symbol:cyh-1 species:6239 "Caenorhabd... 288 2.2e-25 1
ASPGD|ASPL0000048807 - symbol:AN2211 species:162425 "Emer... 254 1.7e-24 2
CGD|CAL0002756 - symbol:orf19.4542 species:5476 "Candida ... 272 1.1e-23 1
DICTYBASE|DDB_G0268668 - symbol:cycH "putative H-type cyc... 246 6.3e-21 1
POMBASE|SPBP16F5.02 - symbol:mcs2 "TFIIH complex cyclin M... 246 6.3e-21 1
SGD|S000006229 - symbol:CCL1 "Cyclin associated with prot... 249 7.0e-20 1
DICTYBASE|DDB_G0274139 - symbol:cycC "putative C-type cyc... 184 3.6e-13 1
UNIPROTKB|A4RD79 - symbol:SSN8 "RNA polymerase II holoenz... 187 3.6e-12 1
TAIR|locus:2152556 - symbol:AT5G48640 species:3702 "Arabi... 172 2.9e-11 1
POMBASE|SPBC32F12.06 - symbol:pch1 "P-TEFB associated cyc... 166 8.3e-10 1
FB|FBgn0004597 - symbol:CycC "Cyclin C" species:7227 "Dro... 162 9.3e-10 1
ASPGD|ASPL0000048419 - symbol:AN2172 species:162425 "Emer... 159 3.7e-09 1
UNIPROTKB|Q29AI1 - symbol:CycC "Cyclin-C" species:46245 "... 157 3.8e-09 1
RGD|70905 - symbol:Ccnc "cyclin C" species:10116 "Rattus ... 150 3.1e-08 1
UNIPROTKB|P39947 - symbol:Ccnc "Cyclin-C" species:10116 "... 150 3.1e-08 1
UNIPROTKB|Q91031 - symbol:CCNC "Cyclin C" species:9031 "G... 148 4.9e-08 1
UNIPROTKB|F1RXY0 - symbol:CCNC "Uncharacterized protein" ... 148 5.6e-08 1
UNIPROTKB|P55168 - symbol:CCNC "Cyclin-C" species:9031 "G... 148 5.7e-08 1
UNIPROTKB|F1PGM0 - symbol:CCNC "Uncharacterized protein" ... 148 5.8e-08 1
UNIPROTKB|H0YBQ5 - symbol:CCNC "Cyclin-C" species:9606 "H... 144 6.1e-08 1
ZFIN|ZDB-GENE-030131-7369 - symbol:ccnc "cyclin C" specie... 147 7.4e-08 1
UNIPROTKB|G5E954 - symbol:CCNC "Cyclin-C" species:9606 "H... 138 1.2e-07 1
UNIPROTKB|E5RFK5 - symbol:CCNC "Cyclin-C" species:9606 "H... 145 1.3e-07 1
UNIPROTKB|P24863 - symbol:CCNC "Cyclin-C" species:9606 "H... 145 1.3e-07 1
UNIPROTKB|Q3ZCK5 - symbol:CCNC "Cyclin-C" species:9913 "B... 144 1.7e-07 1
MGI|MGI:1858199 - symbol:Ccnc "cyclin C" species:10090 "M... 143 2.2e-07 1
UNIPROTKB|J3KP90 - symbol:CCNC "Cyclin-C" species:9606 "H... 142 2.8e-07 1
UNIPROTKB|F1LNZ0 - symbol:Ccnc "Cyclin-C" species:10116 "... 143 3.4e-07 1
TAIR|locus:2008698 - symbol:CYCT1;1 "cyclin T1;1" species... 136 8.9e-07 1
SGD|S000004970 - symbol:SSN8 "Cyclin-like component of th... 137 1.5e-06 1
WB|WBGene00000506 - symbol:cic-1 species:6239 "Caenorhabd... 134 2.8e-06 1
TAIR|locus:2122940 - symbol:CYCT1;2 species:3702 "Arabido... 136 3.9e-06 1
TAIR|locus:2122975 - symbol:CYCT1;4 species:3702 "Arabido... 90 2.4e-05 2
WB|WBGene00009650 - symbol:ccnk-1 species:6239 "Caenorhab... 120 7.2e-05 1
ASPGD|ASPL0000078061 - symbol:pchA species:162425 "Emeric... 123 0.00018 2
POMBASE|SPBC12D12.06 - symbol:srb11 "cyclin CycC, Srb med... 114 0.00026 1
UNIPROTKB|F1NTI7 - symbol:CCNC "Cyclin-C" species:9031 "G... 110 0.00027 1
UNIPROTKB|E5RIH8 - symbol:CCNC "Cyclin-C" species:9606 "H... 96 0.00033 1
CGD|CAL0004675 - symbol:SSN8 species:5476 "Candida albica... 121 0.00037 2
UNIPROTKB|Q5A4H9 - symbol:SSN8 "RNA polymerase II holoenz... 121 0.00037 2
UNIPROTKB|J9NXY6 - symbol:CCNC "Uncharacterized protein" ... 97 0.00039 2
>FB|FBgn0022936 [details] [associations]
symbol:CycH "Cyclin H" species:7227 "Drosophila melanogaster"
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=ISS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0005675 "holo TFIIH complex" evidence=ISS;IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0004693 "cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0032806
"carboxy-terminal domain protein kinase complex" evidence=IDA]
[GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0007049 GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
HSSP:P51946 GO:GO:0005675 PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569
GO:GO:0032806 EMBL:AF024618 ProteinModelPortal:O17144 IntAct:O17144
STRING:O17144 PRIDE:O17144 FlyBase:FBgn0022936 InParanoid:O17144
OrthoDB:EOG4VDNF8 ArrayExpress:O17144 Bgee:O17144 Uniprot:O17144
Length = 325
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 176/290 (60%), Positives = 226/290 (77%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E +L+ R N +I H E + +EHFL+++EER+L++ Y++ L DFC+RF P M
Sbjct: 17 EGQLMEFRVEQNSKYIESHEEEAQGRDLNEHFLTSAEERLLLKQYEIYLFDFCRRFEPTM 76
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQK 158
PK V+GTAFHY KRFYLNNS MDYHPKEIL TCV++ACKVEEFN+SI+QFV+NIKGD+ K
Sbjct: 77 PKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNNIKGDRNK 136
Query: 159 ASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMF 218
A+DI+L+NELLL+ QL Y+LT+HNP+RP+EGFLIDIKTRS +++PDRLRP ID F+D +
Sbjct: 137 ATDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPHIDSFIDSTY 196
Query: 219 LTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKIRTLV 278
+DACLL +PSQIALAAVL +AS+ QENLD+YVT LL A +L LI+AVRKIR +V
Sbjct: 197 YSDACLLHTPSQIALAAVLHAASREQENLDSYVTD-LLFVSAREKLPGLIDAVRKIRIMV 255
Query: 279 SKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDDESAA 328
K + P RE K +EK+L+KCRNQANNPDS +YKER+ D+D+ A
Sbjct: 256 -KQYQQPDREKVKAIEKKLDKCRNQANNPDSELYKERLRRLYTDEDDMPA 304
>UNIPROTKB|E1C948 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008353 "RNA polymerase II carboxy-terminal domain kinase
activity" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0045944 GO:GO:0006366 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0008353 PANTHER:PTHR10026 KO:K06634
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 CTD:902 OMA:EILATCV GO:GO:0019907 GO:GO:0008094
EMBL:AADN02047537 IPI:IPI00594378 RefSeq:XP_424908.2
UniGene:Gga.29608 Ensembl:ENSGALT00000025216 GeneID:427328
KEGG:gga:427328 NextBio:20828605 Uniprot:E1C948
Length = 322
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 133/318 (41%), Positives = 202/318 (63%)
Query: 26 FFSEGQS-YGQCSVEAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQ 84
F+S Q Y E EL R AN+ F + A + L A EE + ++Y+
Sbjct: 2 FYSSTQRRYWTFRSEDELARSRADANRKFRSKAVAGGKVHQGDSFLLEAHEELAICKYYE 61
Query: 85 LQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLS 144
+L DFC F P MP+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S
Sbjct: 62 KRLLDFCAVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVS 121
Query: 145 ISQFVSNIKGD---QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQL- 200
+QFV N++ Q+KA + IL ELLL+QQL +HL VHNPYRP EG LID+KTR L
Sbjct: 122 SAQFVGNLRESPVGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGILIDLKTRYPLL 181
Query: 201 RDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHA 260
+P+ LR D+FL ++ LTDA LLF+PSQIALAA+L SAS+ N+++Y+++ + +
Sbjct: 182 ENPEVLRKTADDFLSRVALTDAYLLFTPSQIALAAILSSASRAGINMESYLSECFMLKEN 241
Query: 261 NVRLVDLIEAVRKIRTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESL 320
L L+E ++ ++ L+ K E P E L+++LEKC + + ++++ K + +
Sbjct: 242 RTFLAKLLEGMKSMKNLIKK-YELPRPEEVASLKQKLEKCHSPELSLNTNVKKRK----I 296
Query: 321 NDDDESAARRYSQLSQKE 338
++DE ++++ ++ ++E
Sbjct: 297 GEEDEYSSKK-PKMDEEE 313
>UNIPROTKB|E2R5P2 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902 OMA:EILATCV
EMBL:AAEX03002082 RefSeq:XP_536300.3 Ensembl:ENSCAFT00000036048
GeneID:479156 KEGG:cfa:479156 Uniprot:E2R5P2
Length = 323
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 130/290 (44%), Positives = 188/290 (64%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E +L LR AN+ F + A FL EE +L ++Y+ +L +FC F P M
Sbjct: 16 EEQLARLRADANRKFKCKAVANGKVLPNDPVFLEPHEEMILCKYYEKRLLEFCSVFKPAM 75
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD--- 155
P+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 76 PRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 135
Query: 156 QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTR-SQLRDPDRLRPGIDEFL 214
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR + +P+ LR D+FL
Sbjct: 136 QEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPMMENPEMLRKTADDFL 195
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKI 274
+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++ +
Sbjct: 196 NRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSM 255
Query: 275 RTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
R LV K E P E L+++LE+C + A + I K+R + DDD
Sbjct: 256 RNLVKK-YEPPRSEEVAALKQKLERCHS-AELALNVITKKR--KGYEDDD 301
>UNIPROTKB|P51946 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA;TAS]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005675 "holo TFIIH complex" evidence=IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=TAS] [GO:0000080 "G1
phase of mitotic cell cycle" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000086 "G2/M
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0000718 "nucleotide-excision
repair, DNA damage removal" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0006360
"transcription from RNA polymerase I promoter" evidence=TAS]
[GO:0006361 "transcription initiation from RNA polymerase I
promoter" evidence=TAS] [GO:0006362 "transcription elongation from
RNA polymerase I promoter" evidence=TAS] [GO:0006363 "termination
of RNA polymerase I transcription" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0006370
"7-methylguanosine mRNA capping" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0050434 "positive regulation of viral
transcription" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006468 "protein phosphorylation" evidence=IDA]
Reactome:REACT_216 Reactome:REACT_71 InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
Reactome:REACT_116125 Reactome:REACT_115566 GO:GO:0000086
GO:GO:0000079 GO:GO:0016032 GO:GO:0000082 Reactome:REACT_1675
GO:GO:0045944 GO:GO:0006468 GO:GO:0016301 GO:GO:0006368
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0000084
GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0000080 Reactome:REACT_1788 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
TIGRFAMs:TIGR00569 CTD:902 HOGENOM:HOG000232149 HOVERGEN:HBG050840
OrthoDB:EOG47SSF4 EMBL:U11791 EMBL:U12685 EMBL:CR407658
EMBL:AF477979 EMBL:BC005280 EMBL:BC016705 EMBL:BC016823
EMBL:BC022351 IPI:IPI00021305 PIR:I38731 RefSeq:NP_001230.1
UniGene:Hs.292524 PDB:1JKW PDB:1KXU PDBsum:1JKW PDBsum:1KXU
DisProt:DP00307 ProteinModelPortal:P51946 SMR:P51946 DIP:DIP-5996N
IntAct:P51946 MINT:MINT-1434271 STRING:P51946 PhosphoSite:P51946
DMDM:1706232 PaxDb:P51946 PeptideAtlas:P51946 PRIDE:P51946
DNASU:902 Ensembl:ENST00000256897 GeneID:902 KEGG:hsa:902
UCSC:uc003kja.3 GeneCards:GC05M086690 HGNC:HGNC:1594 HPA:CAB019416
MIM:601953 neXtProt:NX_P51946 PharmGKB:PA26159 InParanoid:P51946
OMA:EILATCV PhylomeDB:P51946 BindingDB:P51946 ChEMBL:CHEMBL2165
ChiTaRS:CCNH EvolutionaryTrace:P51946 GenomeRNAi:902 NextBio:3728
ArrayExpress:P51946 Bgee:P51946 CleanEx:HS_CCNH
Genevestigator:P51946 GermOnline:ENSG00000134480 GO:GO:0019907
GO:GO:0006370 GO:GO:0000718 GO:GO:0050434 GO:GO:0006363
GO:GO:0006362 GO:GO:0006361 GO:GO:0006283 Uniprot:P51946
Length = 323
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 132/292 (45%), Positives = 188/292 (64%)
Query: 37 SVEAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSP 96
S E +L LR AN+ F + A FL EE L ++Y+ +L +FC F P
Sbjct: 14 SSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKP 73
Query: 97 PMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD- 155
MP+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 74 AMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESP 133
Query: 156 --QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQ-LRDPDRLRPGIDE 212
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR L +P+ LR D+
Sbjct: 134 LGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADD 193
Query: 213 FLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVR 272
FL+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++
Sbjct: 194 FLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMK 253
Query: 273 KIRTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
+R LV K E P E L+++LE+C + A + I K+R + DDD
Sbjct: 254 SMRNLVKK-YEPPRSEEVAVLKQKLERCHS-AELALNVITKKR--KGYEDDD 301
>UNIPROTKB|Q4R7U4 [details] [associations]
symbol:CCNH "Cyclin-H" species:9541 "Macaca fascicularis"
[GO:0005675 "holo TFIIH complex" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0008353 "RNA polymerase II
carboxy-terminal domain kinase activity" evidence=ISS]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 GO:GO:0006468
GO:GO:0007049 GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 PANTHER:PTHR10026 HSSP:P51946 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOVERGEN:HBG050840
EMBL:AB168718 ProteinModelPortal:Q4R7U4 SMR:Q4R7U4 Uniprot:Q4R7U4
Length = 323
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 132/292 (45%), Positives = 188/292 (64%)
Query: 37 SVEAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSP 96
S E +L LR AN+ F + A FL EE L ++Y+ +L +FC F P
Sbjct: 14 SSEEQLARLRADANRKFRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKP 73
Query: 97 PMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD- 155
MP+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 74 AMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESP 133
Query: 156 --QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQ-LRDPDRLRPGIDE 212
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR L +P+ LR D+
Sbjct: 134 LGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADD 193
Query: 213 FLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVR 272
FL+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++
Sbjct: 194 FLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLRENRTCLSQLLDIMK 253
Query: 273 KIRTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
+R LV K E P E L+++LE+C + A + I K+R + DDD
Sbjct: 254 SMRNLVKK-YEPPRSEEVAVLKQKLERCHS-AELALNVITKKR--KGYEDDD 301
>ZFIN|ZDB-GENE-050320-13 [details] [associations]
symbol:ccnh "cyclin H" species:7955 "Danio rerio"
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0070985 "TFIIK complex"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 ZFIN:ZDB-GENE-050320-13 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
TIGRFAMs:TIGR00569 CTD:902 HOVERGEN:HBG050840 EMBL:BC091559
EMBL:DQ294346 IPI:IPI00510205 RefSeq:NP_001013471.1
UniGene:Dr.95737 SMR:Q5BJA4 STRING:Q5BJA4 GeneID:541325
KEGG:dre:541325 InParanoid:Q5BJA4 NextBio:20879144 Uniprot:Q5BJA4
Length = 319
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 134/304 (44%), Positives = 186/304 (61%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E L LR ANQ F + + L+ EE+VL +HY+ +L DFC F P M
Sbjct: 16 EETLDKLRLEANQKFCSKALSSGKPGINESTLLNEQEEKVLFKHYEKRLLDFCAVFKPVM 75
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIK---GD 155
PK V+GTA Y +RFYLNNS+M+YHP+ I++TC YL+CKV+EFN+S +QFV N++
Sbjct: 76 PKSVVGTACMYFRRFYLNNSLMEYHPRTIMLTCAYLSCKVDEFNVSSTQFVGNLQESPAG 135
Query: 156 QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQL-RDPDRLRPGIDEFL 214
Q++A D IL ELLL+QQL +HL VHNPYRP+EGFLID+KTR L +P+ LR ++FL
Sbjct: 136 QERAVDQILEYELLLIQQLNFHLVVHNPYRPLEGFLIDLKTRYPLLENPEMLRKSAEDFL 195
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKI 274
++ +TDA LLFSPSQIAL AVL SA++ +D Y+ + + + L + E++R++
Sbjct: 196 NRATMTDAGLLFSPSQIALTAVLNSAARAGLKMDVYLNECMGLKEDKETLSKMYESMRRM 255
Query: 275 RTLVSKPIESPSREMFKQLEKRLEKC---------RNQANNPDSHIYKERML--ESLNDD 323
+LV K E P E +++LE+ R D HI K +M+ E DD
Sbjct: 256 TSLV-KAYELPKAEEVSICKQKLERIYAEFATNLKRKHGYEDDDHIVKRQMVADEEWTDD 314
Query: 324 DESA 327
D A
Sbjct: 315 DLDA 318
>UNIPROTKB|C9K506 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0008353 "RNA polymerase II carboxy-terminal domain kinase
activity" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0000079 "regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0045944 GO:GO:0006366
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0008353
eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 CTD:902 OrthoDB:EOG47SSF4 OMA:EILATCV
GO:GO:0019907 GO:GO:0008094 EMBL:FP340351 EMBL:AB499892
RefSeq:NP_001159785.1 UniGene:Ssc.11994 STRING:C9K506
Ensembl:ENSSSCT00000015451 GeneID:100310796 KEGG:ssc:100310796
Uniprot:C9K506
Length = 323
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 124/268 (46%), Positives = 177/268 (66%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E +L LR AN+ F + A FL EE +L ++Y+ +L +FC F P M
Sbjct: 16 EEQLARLRADANRKFRCKAVANGKVLPNDPIFLEPHEEMILCKYYEKRLLEFCSVFKPAM 75
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD--- 155
P+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 76 PRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 135
Query: 156 QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTR-SQLRDPDRLRPGIDEFL 214
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR L +P+ LR D+FL
Sbjct: 136 QEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPMLENPEILRKTADDFL 195
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKI 274
++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++ +
Sbjct: 196 SRVALTDAHLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTSLSQLLDIMKSM 255
Query: 275 RTLVSKPIESPSREMFKQLEKRLEKCRN 302
R LV K E P E L+++LE+C +
Sbjct: 256 RNLVKK-YEPPRSEEVAVLKQKLERCHS 282
>RGD|69419 [details] [associations]
symbol:Ccnh "cyclin H" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005675
"holo TFIIH complex" evidence=ISO;ISS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0006468
"protein phosphorylation" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=ISO;ISS] [GO:0016301 "kinase
activity" evidence=ISO] [GO:0016310 "phosphorylation" evidence=ISO]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0019907 "cyclin-dependent protein kinase
activating kinase holoenzyme complex" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0070985 "TFIIK complex"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 RGD:69419 GO:GO:0000079
GO:GO:0045944 GO:GO:0007049 GO:GO:0006366 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0008353 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902
HOGENOM:HOG000232149 HOVERGEN:HBG050840 OrthoDB:EOG47SSF4
OMA:EILATCV GO:GO:0019907 GO:GO:0008094 EMBL:AF154914 EMBL:AJ276495
EMBL:BC059109 IPI:IPI00326558 RefSeq:NP_443213.2 UniGene:Rn.23255
ProteinModelPortal:Q9R1A0 SMR:Q9R1A0 STRING:Q9R1A0 PRIDE:Q9R1A0
Ensembl:ENSRNOT00000049423 GeneID:84389 KEGG:rno:84389
UCSC:RGD:69419 InParanoid:Q9R1A0 NextBio:616747
Genevestigator:Q9R1A0 GermOnline:ENSRNOG00000031656 Uniprot:Q9R1A0
Length = 323
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 130/290 (44%), Positives = 187/290 (64%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E +L LR AN+ F + A FL EE L ++Y+ +L +FC F P M
Sbjct: 16 EEQLARLRADANRKFKCKAVANGKVLPNDPLFLEPHEEMTLCKYYEKRLLEFCSVFKPAM 75
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD--- 155
P+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 76 PRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 135
Query: 156 QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTR-SQLRDPDRLRPGIDEFL 214
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLIDIKTR L +P+ LR D+FL
Sbjct: 136 QEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDIKTRYPMLENPEILRKTADDFL 195
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKI 274
++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++ +
Sbjct: 196 SRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSM 255
Query: 275 RTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
R LV K E P E L+++LE+C + ++ + + K+R + DDD
Sbjct: 256 RNLVKK-YEPPRSEEVAILKQKLERCHS-SDLALNMVTKKR--KGYEDDD 301
>UNIPROTKB|F1MG12 [details] [associations]
symbol:CCNH "Cyclin-H" species:9913 "Bos taurus"
[GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 IPI:IPI00689727
UniGene:Bt.177 OMA:EILATCV EMBL:DAAA02021165 EMBL:DAAA02021166
Ensembl:ENSBTAT00000035017 Uniprot:F1MG12
Length = 320
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 130/290 (44%), Positives = 187/290 (64%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E +L LR AN+ F + A FL EE L ++Y+ +L +FC F P M
Sbjct: 16 EEQLARLRADANRKFKCKAVANGKVLPNDPVFLEPHEEITLCKYYEKRLLEFCSVFKPAM 75
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD--- 155
P+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 76 PRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 135
Query: 156 QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQL-RDPDRLRPGIDEFL 214
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR L +P+ LR D+FL
Sbjct: 136 QEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPLLENPEILRKTADDFL 195
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKI 274
+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++ +
Sbjct: 196 NRVALTDAHLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTSLSQLLDIMKSM 255
Query: 275 RTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
R LV K E P E L+++LE+C + A + + K+R + DDD
Sbjct: 256 RNLVKK-YEPPRPEEVAALKQKLERCHS-AELALNVVTKKR--KGYEDDD 301
>UNIPROTKB|Q3ZBL9 [details] [associations]
symbol:CCNH "Cyclin-H" species:9913 "Bos taurus"
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0005675
"holo TFIIH complex" evidence=ISS] [GO:0008353 "RNA polymerase II
carboxy-terminal domain kinase activity" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004672 "protein kinase activity" evidence=ISS] [GO:0007049
"cell cycle" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0070985 "TFIIK
complex" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0006468 GO:GO:0007049
GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634
GO:GO:0005675 PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569
EMBL:BC103224 IPI:IPI00689727 RefSeq:NP_001073256.1 UniGene:Bt.177
ProteinModelPortal:Q3ZBL9 SMR:Q3ZBL9 STRING:Q3ZBL9 GeneID:615512
KEGG:bta:615512 CTD:902 HOGENOM:HOG000232149 HOVERGEN:HBG050840
InParanoid:Q3ZBL9 OrthoDB:EOG47SSF4 NextBio:20899653 Uniprot:Q3ZBL9
Length = 320
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 129/290 (44%), Positives = 186/290 (64%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E +L LR AN+ F + A FL EE L ++Y+ +L +FC F P M
Sbjct: 16 EEQLARLRADANRKFKCKAVANGKVLPNDPVFLEPHEEITLCKYYEKRLLEFCSVFKPAM 75
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD--- 155
P+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 76 PRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 135
Query: 156 QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQL-RDPDRLRPGIDEFL 214
Q+K + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR L +P+ LR D+FL
Sbjct: 136 QEKTLEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPLLENPEILRKTADDFL 195
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKI 274
+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++ +
Sbjct: 196 NRVALTDAHLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTSLSQLLDIMKSM 255
Query: 275 RTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
R LV K E P E L+++LE+C + A + + K+R + DDD
Sbjct: 256 RNLVKK-YEPPRPEEVAALKQKLERCHS-AELALNVVTKKR--KGYEDDD 301
>MGI|MGI:1913921 [details] [associations]
symbol:Ccnh "cyclin H" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005675 "holo
TFIIH complex" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006468 "protein phosphorylation" evidence=ISO;ISS] [GO:0007049
"cell cycle" evidence=ISS] [GO:0016301 "kinase activity"
evidence=IDA] [GO:0016310 "phosphorylation" evidence=IDA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 MGI:MGI:1913921 GO:GO:0000079 GO:GO:0045944
GO:GO:0006366 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0004693 GO:GO:0008353 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
GeneTree:ENSGT00390000008634 TIGRFAMs:TIGR00569 CTD:902
HOVERGEN:HBG050840 OrthoDB:EOG47SSF4 GO:GO:0019907 EMBL:AF287135
EMBL:AK007910 EMBL:AK078059 EMBL:BC038861 EMBL:X82441
IPI:IPI00752728 PIR:S48862 RefSeq:NP_075732.1 UniGene:Mm.18474
ProteinModelPortal:Q61458 SMR:Q61458 STRING:Q61458
PhosphoSite:Q61458 PaxDb:Q61458 PRIDE:Q61458
Ensembl:ENSMUST00000022030 GeneID:66671 KEGG:mmu:66671
UCSC:uc007riu.1 InParanoid:Q61458 NextBio:322333 Bgee:Q61458
CleanEx:MM_CCNH Genevestigator:Q61458 GermOnline:ENSMUSG00000021548
GO:GO:0008094 Uniprot:Q61458
Length = 323
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 128/290 (44%), Positives = 187/290 (64%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E +L LR AN+ F + A FL EE L ++Y+ +L +FC F P M
Sbjct: 16 EEQLARLRADANRKFKCKAVANGKVLPNDPVFLEPHEELTLCKYYEKRLLEFCSVFKPAM 75
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD--- 155
P+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 76 PRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLG 135
Query: 156 QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTR-SQLRDPDRLRPGIDEFL 214
Q++A + IL ELLL+QQL +HL VHNPYRP EGFLIDIKTR L +P+ LR D+FL
Sbjct: 136 QERALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDIKTRYPMLENPEILRKTADDFL 195
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKI 274
++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++ +
Sbjct: 196 SRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKSM 255
Query: 275 RTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
R LV K E P + L+++LE+C + ++ + + K+R + DDD
Sbjct: 256 RNLVKK-YEPPRSDEVAVLKQKLERCHS-SDLALNAVTKKR--KGYEDDD 301
>UNIPROTKB|E2QYZ5 [details] [associations]
symbol:CCNH "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 EMBL:AAEX03002082 Ensembl:ENSCAFT00000013308
Uniprot:E2QYZ5
Length = 326
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 125/293 (42%), Positives = 180/293 (61%)
Query: 39 EAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKR---FS 95
E +L LR AN+ F + A + F S V + + L L D
Sbjct: 16 EEQLARLRADANRKFKCKAVANGKYIIVLKLFYEPSRYFVTLVDFYLSLCDLMTEKGMLK 75
Query: 96 PPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD 155
P P +V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 76 PSQPTLVLGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRES 135
Query: 156 ---QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTR-SQLRDPDRLRPGID 211
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR + +P+ LR D
Sbjct: 136 PLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPMMENPEMLRKTAD 195
Query: 212 EFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAV 271
+FL+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ +
Sbjct: 196 DFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIM 255
Query: 272 RKIRTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
+ +R LV K E P E L+++LE+C + A + I K+R + DDD
Sbjct: 256 KSMRNLVKK-YEPPRSEEVAALKQKLERCHS-AELALNVITKKR--KGYEDDD 304
>UNIPROTKB|D6RG18 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOGENOM:HOG000232149
OrthoDB:EOG47SSF4 HGNC:HGNC:1594 ChiTaRS:CCNH EMBL:AC018754
IPI:IPI00965191 ProteinModelPortal:D6RG18 SMR:D6RG18
Ensembl:ENST00000508855 ArrayExpress:D6RG18 Bgee:D6RG18
Uniprot:D6RG18
Length = 255
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 112/231 (48%), Positives = 160/231 (69%)
Query: 98 MPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD-- 155
MP+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 1 MPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPL 60
Query: 156 -QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQ-LRDPDRLRPGIDEF 213
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR L +P+ LR D+F
Sbjct: 61 GQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDF 120
Query: 214 LDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRK 273
L+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++
Sbjct: 121 LNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKS 180
Query: 274 IRTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
+R LV K E P E L+++LE+C + A + I K+R + DDD
Sbjct: 181 MRNLVKK-YEPPRSEEVAVLKQKLERCHS-AELALNVITKKR--KGYEDDD 227
>UNIPROTKB|D6RHI7 [details] [associations]
symbol:CCNH "Cyclin-H" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 InterPro:IPR027081 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 GO:GO:0016301 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GO:GO:0005675
PANTHER:PTHR10026:SF8 TIGRFAMs:TIGR00569 HOGENOM:HOG000232149
HGNC:HGNC:1594 ChiTaRS:CCNH EMBL:AC018754 IPI:IPI00556112
SMR:D6RHI7 Ensembl:ENST00000504878 Uniprot:D6RHI7
Length = 249
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 112/231 (48%), Positives = 160/231 (69%)
Query: 98 MPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD-- 155
MP+ V+GTA Y KRFYLNNSVM+YHP+ I++TC +LACKV+EFN+S QFV N++
Sbjct: 1 MPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPL 60
Query: 156 -QQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQ-LRDPDRLRPGIDEF 213
Q+KA + IL ELLL+QQL +HL VHNPYRP EGFLID+KTR L +P+ LR D+F
Sbjct: 61 GQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKTADDF 120
Query: 214 LDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRK 273
L+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++
Sbjct: 121 LNRIALTDAYLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTCLSQLLDIMKS 180
Query: 274 IRTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
+R LV K E P E L+++LE+C + A + I K+R + DDD
Sbjct: 181 MRNLVKK-YEPPRSEEVAVLKQKLERCHS-AELALNVITKKR--KGYEDDD 227
>UNIPROTKB|E1BCT0 [details] [associations]
symbol:E1BCT0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070985 "TFIIK complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GO:GO:0005675 PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634
TIGRFAMs:TIGR00569 OMA:ACFYLAM EMBL:DAAA02043038 IPI:IPI00692730
Ensembl:ENSBTAT00000015470 Uniprot:E1BCT0
Length = 323
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 123/291 (42%), Positives = 180/291 (61%)
Query: 41 ELIALREAANQNFILEHRAELTDEEASEH--FLSASEERVLVRHYQLQLRDFCKRFSPPM 98
E +A +N+ F + AE E S FL EE L ++Y+ +L +FC F P M
Sbjct: 17 EQLARLPPSNRKFKCKAVAEPEAEVLSNDPVFLEPHEEITLCKYYEKRLLEFCSLFKPAM 76
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD--Q 156
+ V+GTA Y K FYLNNSVM YHP I++TC +LACKV+EFN+S QF + + Q
Sbjct: 77 SRSVVGTACMYFKSFYLNNSVMKYHPWIIMLTCEFLACKVDEFNVSRPQFGNLWESPLVQ 136
Query: 157 QKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFL--IDIKTRSQL-RDPDRLRPGIDEF 213
+KA + IL ELL+ QQL +HL VHNPYRP EG+ ID+KTR L +P+ LR D+F
Sbjct: 137 EKALEQILEYELLI-QQLNFHLIVHNPYRPFEGYYRPIDLKTRYPLLENPEILRKTADDF 195
Query: 214 LDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLIEAVRK 273
L+++ LTDA LL++PSQIAL A+L SAS+ +++Y++++L+ + L L++ ++
Sbjct: 196 LNRVALTDAHLLYTPSQIALTAILSSASRAGITMESYLSESLMLKENRTSLSQLLDIMKS 255
Query: 274 IRTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
+R LV K E P E L+++LE+C + A + + K+R + DDD
Sbjct: 256 MRNLVKK-YEPPKPEEVA-LKQKLERCHS-AELALNVVTKKR--KGYEDDD 301
>TAIR|locus:2143671 [details] [associations]
symbol:CYCH;1 "cyclin H;1" species:3702 "Arabidopsis
thaliana" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005675
"holo TFIIH complex" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISS] [GO:0004672 "protein
kinase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000278
"mitotic cell cycle" evidence=RCA] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0010440
"stomatal lineage progression" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0045736 "negative regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=RCA] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0005634 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 GO:GO:0004672 EMBL:AC007478
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 PANTHER:PTHR10026 EMBL:AB051072 EMBL:AK118707
IPI:IPI00548103 RefSeq:NP_198114.2 UniGene:At.27359 HSSP:P51946
ProteinModelPortal:Q8W5S1 SMR:Q8W5S1 IntAct:Q8W5S1 STRING:Q8W5S1
PaxDb:Q8W5S1 PRIDE:Q8W5S1 EnsemblPlants:AT5G27620.1 GeneID:832824
KEGG:ath:AT5G27620 GeneFarm:3392 TAIR:At5g27620
HOGENOM:HOG000030045 InParanoid:Q8W5S1 KO:K06634 OMA:HKIQATA
PhylomeDB:Q8W5S1 ProtClustDB:CLSN2690204 Genevestigator:Q8W5S1
GO:GO:0005675 PANTHER:PTHR10026:SF8 Uniprot:Q8W5S1
Length = 336
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 86/251 (34%), Positives = 138/251 (54%)
Query: 71 LSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVT 130
LSA EER + Y+ ++++ C F+ P + TA Y KRFYL SVM +HPKEI++T
Sbjct: 71 LSADEERFMRAFYEAKVQEVCSAFA--FPHKIQATALQYFKRFYLQWSVMQHHPKEIMLT 128
Query: 131 CVYLACKVEEFNLSISQFVSNIKGDQQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGF 190
CVY ACK+EE ++S + I D + IIL E+ ++Q L++ L V+ PYR +EGF
Sbjct: 129 CVYAACKIEENHVSAEEIGKGINQDHR----IILKYEMAVLQSLEFDLIVYAPYRAIEGF 184
Query: 191 LIDIKTRSQLRDPD-----RLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQE 245
+ +++ Q RD + L G DK+ LTDA LLF P Q+ALA++ + L
Sbjct: 185 VNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDAPLLFPPGQLALASLRIANGVLGV 244
Query: 246 -NLDAYVTQTLLGQHANVRLVDLIEAVRKIRTLVSKPIESPSREMFKQLEKRLEKCRNQA 304
+ D Y+ + ++ +L + + I LV K + PS + K + ++L+ C +
Sbjct: 245 IDFDRYLENIVSQPNSEHTTSELTKLLDNIEYLV-KNYKCPSEKDMKHINRKLKSCLGHS 303
Query: 305 NNPDSHIYKER 315
++ D +E+
Sbjct: 304 SSHDESKKREK 314
>WB|WBGene00021714 [details] [associations]
symbol:cyh-1 species:6239 "Caenorhabditis elegans"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0005675
"holo TFIIH complex" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR015429 InterPro:IPR023598
InterPro:IPR027081 PIRSF:PIRSF028758 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0000079 GO:GO:0002119
GO:GO:0006355 GO:GO:0010171 GO:GO:0040011 GO:GO:0040035
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5333
PANTHER:PTHR10026 HSSP:P51946 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 GeneTree:ENSGT00390000008634 OMA:ACFYLAM
EMBL:FO080566 RefSeq:NP_494564.2 ProteinModelPortal:Q9N4U0
SMR:Q9N4U0 STRING:Q9N4U0 PaxDb:Q9N4U0 EnsemblMetazoa:Y49F6B.1
GeneID:190078 KEGG:cel:CELE_Y49F6B.1 UCSC:Y49F6B.1 CTD:190078
WormBase:Y49F6B.1 HOGENOM:HOG000021232 InParanoid:Q9N4U0
NextBio:944568 Uniprot:Q9N4U0
Length = 332
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 89/275 (32%), Positives = 139/275 (50%)
Query: 41 ELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPK 100
+L A+R N F ++ + + +E E F++ EE + R + F +F P +
Sbjct: 17 KLAAMRLEINIKFRQKYESVMQPDEL-ELFVTPEEELRMQRSIEDAALKFADKFRPHIWP 75
Query: 101 VVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIK-GDQQKA 159
V TA + KR +L D + +++ C YLA K++EF ++I FV N+ G+ ++
Sbjct: 76 SVKWTALAFFKRAFLVWVPSDTSIRMVMMACFYLAMKIDEFYITIEDFVKNMNVGEPRQN 135
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLR--DPDRLRPGIDEFLDKM 217
++ IL E LM+ L Y+LTVH PYRP EG L+D+KTR L D + +R F
Sbjct: 136 AERILKLEPELMKILDYNLTVHCPYRPYEGHLMDMKTRMLLLNFDLESIRRDSMRFFQNA 195
Query: 218 FLTDACLLFSPSQIALAAV---LQSASKLQENLDAYVTQTLLG------QHANVRLVDLI 268
TD LL+ PSQIALAA+ L + K E L ++ + L+G H + R DL
Sbjct: 196 LQTDVLLLYPPSQIALAAINFGLHAQGKSDEILREFLRK-LIGIEEDSWAHRDARPEDL- 253
Query: 269 EAVRKIRTLVSKPIESPSREMFKQLEKRLEKCRNQ 303
E + K T V++ + R E+ E ++Q
Sbjct: 254 EKLEKTVTRVNQIMREVDRNFVAVTEQERENHKSQ 288
>ASPGD|ASPL0000048807 [details] [associations]
symbol:AN2211 species:162425 "Emericella nidulans"
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0070816 "phosphorylation of RNA polymerase II C-terminal
domain" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0070985 "TFIIK complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004861
"cyclin-dependent protein serine/threonine kinase inhibitor
activity" evidence=IEA] [GO:0000079 "regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] InterPro:IPR015429
InterPro:IPR027081 GO:GO:0000079 GO:GO:0006355 EMBL:BN001307
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8
OMA:EDDIYRT OrthoDB:EOG4CRQ82 EMBL:AACD01000035 RefSeq:XP_659815.1
ProteinModelPortal:Q5BB69 STRING:Q5BB69
EnsemblFungi:CADANIAT00008895 GeneID:2875348 KEGG:ani:AN2211.2
HOGENOM:HOG000172846 Uniprot:Q5BB69
Length = 429
Score = 254 (94.5 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 62 TDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMD 121
T EE L+ EE+ LVR+Y Q+ + + PP+P +V TA YL+RFYL NS M
Sbjct: 71 TSEEKDIECLTPEEEQDLVRYYCEQIIQLGESYKPPLPTIVRATAIQYLRRFYLTNSPMT 130
Query: 122 YHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQKASDIILNNELLLMQQLKYHLTVH 181
YHPK I+ +++A K + + +S+ F + GD A DII E L+MQ L++ V
Sbjct: 131 YHPKTIMPCALFIATKTDNYYMSLRHFADGVPGDTT-AEDIIAP-EFLVMQSLRFTFDVR 188
Query: 182 NPYRPVEGFLIDIKTRSQ 199
+P+R +EG ++++ +Q
Sbjct: 189 HPFRGLEGGIMELNAIAQ 206
Score = 64 (27.6 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 219 LTDACLLFSPSQIALAAVLQSASKL-QENLDAYV---TQTLLG-QHANVRL-VDLIEAVR 272
+TDA L++PSQI L+A+ + L Q LD + + G +H L +++ +
Sbjct: 265 MTDAYFLYTPSQIWLSALSIADQPLAQFYLDTKLPTPNASETGNEHPLAHLRAKVLQTLT 324
Query: 273 KIRTLVS--KPIES-PS-REMFKQLEKRLEKCRN 302
TL+ KP+ S P ++ +++ K+L C+N
Sbjct: 325 SCATLLQSYKPLASDPEQKKAMRRIGKKLYHCQN 358
>CGD|CAL0002756 [details] [associations]
symbol:orf19.4542 species:5476 "Candida albicans" [GO:0070985
"TFIIK complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IEA] [GO:0071901 "negative regulation of protein
serine/threonine kinase activity" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IEA]
InterPro:IPR015429 InterPro:IPR027081 CGD:CAL0002756 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG5333 PANTHER:PTHR10026 KO:K06634 GO:GO:0005675
PANTHER:PTHR10026:SF8 EMBL:AACQ01000143 EMBL:AACQ01000140
RefSeq:XP_712873.1 RefSeq:XP_712967.1 ProteinModelPortal:Q59T89
STRING:Q59T89 GeneID:3645435 GeneID:3645529 KEGG:cal:CaO19.12017
KEGG:cal:CaO19.4542 Uniprot:Q59T89
Length = 395
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 84/275 (30%), Positives = 138/275 (50%)
Query: 47 EAANQNFILEH--RAELTDEEASEHFLSA---SEERVLVRHYQLQLRDFCKRFSPPMPKV 101
++A +N EH E +E +E+ +S EE + Y + C F MP
Sbjct: 64 KSAFENAKKEHPDAFEQFPDELNENMVSLLTLEEESTYLDFYIQNITTTCNFFK--MPTQ 121
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQKASD 161
V TA + K+FYL NSVM++HPK +L TC++LA K E + +SI +V +KG +
Sbjct: 122 VRLTAASFFKKFYLVNSVMEFHPKNVLYTCIFLAAKSENYFISIESYVKALKGTD---TS 178
Query: 162 IILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLR--PGID-------- 211
IL+ E +++Q LK+ L VH+P R + GF +D + + L P+++ +D
Sbjct: 179 HILDLEFIVLQSLKFTLLVHHPIRALYGFFLDFQ--AVLLHPEQVMYDVSVDTLGNMYNQ 236
Query: 212 --EFLDKMFL-TDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLI 268
E+L+K F+ +D LF+P QIALAA+ + ++ D Y+ + LG + +
Sbjct: 237 AKEWLNKYFMVSDVAFLFTPPQIALAAMYDTDKRIT---DKYLRRKYLGNEEKLDPIKEQ 293
Query: 269 EAVRKIRTLVSKPIESPSREMFKQLEKRLEKCRNQ 303
E + + K + + S E K + K K N+
Sbjct: 294 ENENEKQNGEDKSVVA-SEEASKDVSKEKTKSSNR 327
>DICTYBASE|DDB_G0268668 [details] [associations]
symbol:cycH "putative H-type cyclin" species:44689
"Dictyostelium discoideum" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR015429 dictyBase:DDB_G0268668
GO:GO:0005634 GO:GO:0000079 GenomeReviews:CM000150_GR GO:GO:0006355
GO:GO:0006351 EMBL:AAFI02000004 GO:GO:0007049 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 eggNOG:COG5333 PANTHER:PTHR10026 HSSP:P51946
KO:K06634 RefSeq:XP_646851.1 ProteinModelPortal:Q55F19
STRING:Q55F19 EnsemblProtists:DDB0231776 GeneID:8616534
KEGG:ddi:DDB_G0268668 InParanoid:Q55F19 OMA:CKTEDNH Uniprot:Q55F19
Length = 286
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 62/203 (30%), Positives = 109/203 (53%)
Query: 45 LREAANQNFILEHRAELTDEEASE--HFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVV 102
LRE N +H+ + ++ S + LS +E L+ +Y+ + + + +P V
Sbjct: 22 LREQCNN----QHKQVILEKTPSSEPNILSPDDELSLIHYYETKTLEIAMALN--LPDKV 75
Query: 103 IGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQKASDI 162
A Y+KRFYL NS+M Y K ++++C+++ACK E+ +L I + SNI + SDI
Sbjct: 76 SAPAIIYIKRFYLKNSIMQYGAKLVMLSCLFIACKTEDNHLDIDYY-SNIT--KASPSDI 132
Query: 163 ILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRD------P---DRLRPGIDEF 213
N E+++++ L ++L V++P+RP+ G+++DI S + + P D L +
Sbjct: 133 T-NLEIIILESLNFNLIVYHPFRPMYGYILDINDNSAIYNNTNGVSPIKFDTLWETCKKS 191
Query: 214 LDKMFLTDACLLFSPSQIALAAV 236
+ K +D C F P IALA +
Sbjct: 192 IQKSLFSDCCFEFHPQIIALACL 214
>POMBASE|SPBP16F5.02 [details] [associations]
symbol:mcs2 "TFIIH complex cyclin Mcs2" species:4896
"Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0000718 "nucleotide-excision repair, DNA damage
removal" evidence=ISS] [GO:0004861 "cyclin-dependent protein
serine/threonine kinase inhibitor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005675 "holo TFIIH complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISO] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IGI] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0070985 "TFIIK complex" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 InterPro:IPR027081
PIRSF:PIRSF028758 PomBase:SPBP16F5.02 GO:GO:0007346 GO:GO:0000079
GO:GO:0051301 GO:GO:0006355 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0007049 GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0004861 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
KO:K06634 GO:GO:0005675 PANTHER:PTHR10026:SF8 OrthoDB:EOG4CRQ82
TIGRFAMs:TIGR00569 GO:GO:0000718 EMBL:S59895 PIR:S35380
RefSeq:NP_595776.1 ProteinModelPortal:P36613 IntAct:P36613
STRING:P36613 EnsemblFungi:SPBP16F5.02.1 GeneID:2540555
KEGG:spo:SPBP16F5.02 HOGENOM:HOG000197843 OMA:ACFYLAM
NextBio:20801681 Uniprot:P36613
Length = 322
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 90/311 (28%), Positives = 147/311 (47%)
Query: 39 EAELIALREAANQNF--ILEHRA--ELT--DEEASEHFL----SASEERVLVRHYQLQLR 88
E +L R N+ F I+ R EL+ ++EAS L + EE LV +Y QL
Sbjct: 19 EEDLSKTRAKVNEKFTNIVRERMLEELSLQNKEASLEVLPPTLTVEEELELVNYYSFQLN 78
Query: 89 DFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQF 148
S +P + TA + KRFYL NSVM+Y PK I T ++LA K + +SI QF
Sbjct: 79 ALSSALS--LPTHIRSTAILFFKRFYLINSVMEYSPKIISFTSLFLATKCNDHYISIEQF 136
Query: 149 VSNIKGDQQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRP 208
N+ + + +L E + Q LK+ L V P+RP++GFL+D +T ++
Sbjct: 137 CKNMP---KTTPEEVLEYEFNVCQSLKWDLYVWLPFRPLQGFLLDCQTVLPKVAVEKFYE 193
Query: 209 GID---EFLDKMFLTDACLLFSPSQIALAAVLQSASKL-QENLDAYVTQTLLGQHANVRL 264
D +FL + +D L SPS IAL A+ + + + ++A L Q + +
Sbjct: 194 CHDLSKKFLIETLHSDIYFLHSPSIIALGAIYHTNPTICLQYIEAKKIPEL--QPLIISI 251
Query: 265 VDLIEAVRKIRTLVSKPIESPSREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDD 324
++A +K + + K + R+++ C N N S +Y +R E + ++
Sbjct: 252 SANLKATKKFK-IEKKKAQDYGRKLYF--------CMNPLRNKSSALYLKRKAEEESTNN 302
Query: 325 ESAARRYSQLS 335
A+++S S
Sbjct: 303 NKWAKKFSTSS 313
>SGD|S000006229 [details] [associations]
symbol:CCL1 "Cyclin associated with protein kinase Kin28p"
species:4932 "Saccharomyces cerevisiae" [GO:0070985 "TFIIK complex"
evidence=IEA;IDA] [GO:0070816 "phosphorylation of RNA polymerase II
C-terminal domain" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0000990 "core RNA polymerase binding
transcription factor activity" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005675 "holo
TFIIH complex" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA;IGI;IPI] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR015429 InterPro:IPR027081 SGD:S000006229
GO:GO:0005739 GO:GO:0000079 GO:GO:0006366 EMBL:Z71255 EMBL:BK006949
EMBL:Z49274 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0070816 GO:GO:0016538 PROSITE:PS00292 eggNOG:COG5333
PANTHER:PTHR10026 KO:K06634 PANTHER:PTHR10026:SF8 EMBL:X71902
PIR:S39383 RefSeq:NP_015350.1 ProteinModelPortal:P37366 SMR:P37366
DIP:DIP-2258N IntAct:P37366 MINT:MINT-528773 STRING:P37366
PaxDb:P37366 PeptideAtlas:P37366 EnsemblFungi:YPR025C GeneID:856136
KEGG:sce:YPR025C CYGD:YPR025c GeneTree:ENSGT00390000008634
HOGENOM:HOG000247914 OMA:EDDIYRT OrthoDB:EOG4CRQ82 NextBio:981239
Genevestigator:P37366 GermOnline:YPR025C GO:GO:0070985
TIGRFAMs:TIGR00569 Uniprot:P37366
Length = 393
Score = 249 (92.7 bits), Expect = 7.0e-20, P = 7.0e-20
Identities = 62/204 (30%), Positives = 104/204 (50%)
Query: 38 VEAELIALREAANQNFILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPP 97
+E L+ REA N + E ++ + +A L+ EE LV Y +++ + +
Sbjct: 80 IEENLLKFREAHN---LTEEEIKVLEAKAIP--LTMEEELDLVNFYAKKVQVIAQHLN-- 132
Query: 98 MPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGDQQ 157
+P V+ TA + +RF+L NSVM PK I+ T ++LACK E + +S+ F K +
Sbjct: 133 LPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTR- 191
Query: 158 KASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKT----RSQLRDPDRLRPGIDEF 213
D +L E L++ LK+ L H+PY+P+ GF +DI+ + L ++ +
Sbjct: 192 ---DSVLKFEFKLLESLKFSLLNHHPYKPLHGFFLDIQNVLYGKVDLNYMGQIYDRCKKR 248
Query: 214 LDKMFLTDACLLFSPSQIALAAVL 237
+ LTD ++P QI LA +L
Sbjct: 249 ITAALLTDVVYFYTPPQITLATLL 272
>DICTYBASE|DDB_G0274139 [details] [associations]
symbol:cycC "putative C-type cyclin" species:44689
"Dictyostelium discoideum" [GO:0016591 "DNA-directed RNA polymerase
II, holoenzyme" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 dictyBase:DDB_G0274139 GO:GO:0005634
GO:GO:0000079 GO:GO:0006355 GenomeReviews:CM000151_GR GO:GO:0006351
EMBL:AAFI02000012 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 GO:GO:0016538 PROSITE:PS00292 eggNOG:COG5333
KO:K15161 PANTHER:PTHR10026 HSSP:O94503 OMA:FFANVIQ
RefSeq:XP_644320.1 ProteinModelPortal:Q86KE7
EnsemblProtists:DDB0231775 GeneID:8619748 KEGG:ddi:DDB_G0274139
ProtClustDB:CLSZ2729216 Uniprot:Q86KE7
Length = 255
Score = 184 (69.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 53/210 (25%), Positives = 104/210 (49%)
Query: 68 EHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDYHPKEI 127
+ +L+ E + L HY +++ + + I TA Y KRFYL NS +D P+ +
Sbjct: 29 KQYLTPIELKKLRTHYCFVIQNLGNALK--LRQRAISTAIVYFKRFYLKNSFVDCEPRLV 86
Query: 128 LVTCVYLACKVEEFNLSISQFVSNIKGDQQKASDI---ILNNELLLMQQLKYHLTVHNPY 184
VTC+YL+ KVEE + + +K + + IL E ++++L + L +++PY
Sbjct: 87 AVTCLYLSSKVEECITQAKKCAAKMKEIDHSFNYLMNDILECEFFVLEELDFCLIIYHPY 146
Query: 185 RPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQ 244
+ + +L +S DP + I ++ + TD CLL+ P + L +L + L+
Sbjct: 147 KSLPFYL-----QSSGLDPASIEI-IWGIVNDSYRTDVCLLYPPFVVGLGCILLGSYLLK 200
Query: 245 ENLDAYVTQTLLGQHANVRLVDLIEAVRKI 274
+++ ++++ NV + D+ E + +
Sbjct: 201 KDIKQWLSEL------NVEMKDIWEVSKDL 224
>UNIPROTKB|A4RD79 [details] [associations]
symbol:SSN8 "RNA polymerase II holoenzyme cyclin-like
subunit" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 EMBL:CM001235
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 KO:K15161
PANTHER:PTHR10026 OrthoDB:EOG4BZRBH RefSeq:XP_003717868.1
ProteinModelPortal:A4RD79 STRING:A4RD79 EnsemblFungi:MGG_01071T0
GeneID:2674146 KEGG:mgr:MGG_01071 Uniprot:A4RD79
Length = 363
Score = 187 (70.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 78/300 (26%), Positives = 131/300 (43%)
Query: 58 RAELTDEEAS-EHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLN 116
R +L +E+ S E R L ++ Q+ K S + + I TA Y+KRFY
Sbjct: 25 RQQLENEDPSLVTMYPLPEWRHLYNYFNYQMLRLAKNLS--IRQQAIATAQVYMKRFYTR 82
Query: 117 NSVMDYHPKEILVTCVYLACKVEEFNL---SISQFVSNIKGDQQKASDI--ILNNELLLM 171
+ +P +LVT VYLACK+EE L ++S + + + +I I E L+
Sbjct: 83 VEIRSTNPTLVLVTAVYLACKMEEMPLHIRNVSLEAKKVWPMETPSLEIAKIGECEFWLI 142
Query: 172 QQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQI 231
++ L VH PYR + D QL + D + FL+ F+TD LL++P I
Sbjct: 143 SEMSAQLIVHQPYRTLTALQQDF----QLANDDHVLAV--SFLNDHFMTDLPLLYAPHTI 196
Query: 232 ALAAVLQSA----SKLQENLDAYVTQTLLGQHANVRLVDLIEAVRKIRTLVSKPIESP-- 285
ALAA++ + SK + +A Q G A + L + + V+ +P
Sbjct: 197 ALAAIMLALVLRLSKASSSNNAAAGQQG-GAQAGPLGITLASGLSMFQQAVAAKAMTPGG 255
Query: 286 --SREMFKQLEKRLEKCRNQANNPDSHIYKERMLESLNDDDESAARRYSQLSQKENAILE 343
S M +++ Q +++++ ++ N E+ A+ QKE + L+
Sbjct: 256 SGSPAMSSPIQQNPPNQAYQLTPQQQEMFRQQQMQQQNRQPETQAK---DSPQKEKSKLQ 312
>TAIR|locus:2152556 [details] [associations]
symbol:AT5G48640 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA;ISS]
[GO:0010440 "stomatal lineage progression" evidence=RCA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 EMBL:AB015468 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PROSITE:PS00292 EMBL:BX833973
IPI:IPI00545165 RefSeq:NP_199675.2 UniGene:At.50515
ProteinModelPortal:Q9FJK6 SMR:Q9FJK6 PRIDE:Q9FJK6
EnsemblPlants:AT5G48640.1 GeneID:834921 KEGG:ath:AT5G48640
GeneFarm:4108 TAIR:At5g48640 eggNOG:COG5333 HOGENOM:HOG000008007
InParanoid:Q9FJK6 KO:K15161 OMA:ATAITYM PhylomeDB:Q9FJK6
ProtClustDB:CLSN2686764 Genevestigator:Q9FJK6 PANTHER:PTHR10026
Uniprot:Q9FJK6
Length = 253
Score = 172 (65.6 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 51/193 (26%), Positives = 97/193 (50%)
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKG---DQQK 158
V+ TA Y++R Y+ S++++ P+ + +TC+YLA K EE + V IK D+
Sbjct: 61 VVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRLYPDEYN 120
Query: 159 ASDI--ILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDK 216
++ IL E+ +++ L Y+L V +PYR + FL D + +++ GI K
Sbjct: 121 KYELKDILGMEMKVLEALDYYLVVFHPYRSLSEFLQDAALNDV--NMNQITWGIVNDTYK 178
Query: 217 MFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLV-----DLIEAV 271
M D L+ P +IALA + ++ ++++ A+ H ++ LV ++++
Sbjct: 179 M---DLILVHPPYRIALACIYIASVHREKDITAWFEDL----HEDMNLVKNIAMEILDFY 231
Query: 272 RKIRTLVSKPIES 284
RT+ + + S
Sbjct: 232 ENYRTITEEKVNS 244
>POMBASE|SPBC32F12.06 [details] [associations]
symbol:pch1 "P-TEFB associated cyclin, cyclin T Pch1"
species:4896 "Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006370 "7-methylguanosine mRNA capping"
evidence=TAS] [GO:0008024 "positive transcription elongation factor
complex b" evidence=TAS] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=NAS]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:1901407
"regulation of phosphorylation of RNA polymerase II C-terminal
domain" evidence=IDA] InterPro:IPR004367 InterPro:IPR015429
Pfam:PF02984 PomBase:SPBC32F12.06 GO:GO:0005829 GO:GO:0000079
GO:GO:0051301 GO:GO:0006355 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0007049 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016538 eggNOG:COG5333 PANTHER:PTHR10026 GO:GO:0006370
GO:GO:0008024 EMBL:U92879 PIR:T40230 RefSeq:NP_596149.1
ProteinModelPortal:O74627 IntAct:O74627 MINT:MINT-253426
STRING:O74627 EnsemblFungi:SPBC32F12.06.1 GeneID:2540237
KEGG:spo:SPBC32F12.06 OMA:ATANIYF OrthoDB:EOG4WWVTW
NextBio:20801368 GO:GO:1901407 Uniprot:O74627
Length = 342
Score = 166 (63.5 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 51/165 (30%), Positives = 82/165 (49%)
Query: 98 MPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEE---------FNLS-ISQ 147
+P+ + TA Y RFYL S+ +YH E+ TC++LA KVE+ N + ++Q
Sbjct: 60 LPQTALATANIYFHRFYLRFSLKNYHYYEVAATCIFLATKVEDSVRKLRDIVINCAKVAQ 119
Query: 148 FVSNIKGDQQKAS-----DIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRD 202
SN+ D+Q D+IL E +L++ L + TV +PY V F+ + + D
Sbjct: 120 KNSNVLVDEQTKEYWRWRDVILYTEEVLLEALCFDFTVEHPYPYVLSFI-----KKFVAD 174
Query: 203 PDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENL 247
+ +++ + ACLL+SP IA AA + K + NL
Sbjct: 175 DKNVTKVAWTYINDSTRSIACLLYSPKTIAAAAFQFALEKNEINL 219
>FB|FBgn0004597 [details] [associations]
symbol:CycC "Cyclin C" species:7227 "Drosophila melanogaster"
[GO:0016538 "cyclin-dependent protein serine/threonine kinase
regulator activity" evidence=ISS;NAS;IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=NAS] [GO:0019908
"nuclear cyclin-dependent protein kinase holoenzyme complex"
evidence=NAS] [GO:0016592 "mediator complex" evidence=ISS;IPI]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISS] [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=ISS;IMP] [GO:0000079
"regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0036011 "imaginal disc-derived leg segmentation"
evidence=IMP] [GO:0022416 "chaeta development" evidence=IMP]
[GO:0045498 "sex comb development" evidence=IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] InterPro:IPR004367 InterPro:IPR015429
InterPro:IPR023598 Pfam:PF02984 PIRSF:PIRSF028758 EMBL:AE014297
GO:GO:0007095 GO:GO:0000079 GO:GO:0022416 GO:GO:0006367
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0036011
GO:GO:0016591 GO:GO:0045498 GO:GO:0016538 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 OMA:FFANVIQ GO:GO:0016592 EMBL:X62948
EMBL:M74906 EMBL:AY061425 PIR:A40269 RefSeq:NP_476848.1
UniGene:Dm.20187 ProteinModelPortal:P25008 SMR:P25008
DIP:DIP-17706N IntAct:P25008 MINT:MINT-280784 STRING:P25008
PaxDb:P25008 PRIDE:P25008 EnsemblMetazoa:FBtr0083010 GeneID:41801
KEGG:dme:Dmel_CG7281 CTD:41801 FlyBase:FBgn0004597
InParanoid:P25008 OrthoDB:EOG4GF1X0 PhylomeDB:P25008
GenomeRNAi:41801 NextBio:825634 Bgee:P25008 GermOnline:CG7281
GO:GO:0001104 Uniprot:P25008
Length = 267
Score = 162 (62.1 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 64/189 (33%), Positives = 85/189 (44%)
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFN-------LSISQFVSNIKG 154
VI TA Y KRFY NS+ + P + TC+ LA KVEEF +SI Q K
Sbjct: 61 VIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKF 120
Query: 155 DQQKASDI------ILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRP 208
A + IL E L++ L L V+ PYRP+ + D+ QL
Sbjct: 121 SYAYAQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSW--- 177
Query: 209 GIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLI 268
++ TD CLL+ P QIA+A LQ A + + DA T+ + NV L +
Sbjct: 178 ---RIVNDSLRTDVCLLYPPYQIAIAC-LQIACVILQK-DA--TKQWFAE-LNVDLDKVQ 229
Query: 269 EAVRKIRTL 277
E VR I L
Sbjct: 230 EIVRAIVNL 238
>ASPGD|ASPL0000048419 [details] [associations]
symbol:AN2172 species:162425 "Emericella nidulans"
[GO:0016592 "mediator complex" evidence=IEA] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0010673 "positive regulation of transcription from RNA
polymerase II promoter during meiosis" evidence=IEA] [GO:0000411
"positive regulation of transcription by galactose" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
EMBL:BN001307 GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 KO:K15161
PANTHER:PTHR10026 HSSP:O94503 EMBL:AACD01000034 OrthoDB:EOG4BZRBH
RefSeq:XP_659776.1 ProteinModelPortal:Q5BBA8 STRING:Q5BBA8
GeneID:2875644 KEGG:ani:AN2172.2 HOGENOM:HOG000217621
Uniprot:Q5BBA8
Length = 302
Score = 159 (61.0 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 51/179 (28%), Positives = 86/179 (48%)
Query: 63 DEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLNNSVMDY 122
D+ + HF ++R+L ++ QL KR S + TA Y+KR+Y N + +
Sbjct: 32 DKASHTHF-PLPDQRLLNIYFNQQLIKLGKRMSTRQQ--ALATAQVYIKRYYTKNEIRNT 88
Query: 123 HPKEILVTCVYLACKVEEFNLSISQFVSNIKG--DQQKASDI--ILNNELLLMQQLKYHL 178
+P +L T YLACK+EE I VS + + D+ + E L+ +++ L
Sbjct: 89 NPYLVLTTAFYLACKMEECPQHIRFVVSEARALWPEFIVPDVSKVGECEFSLISEMQAQL 148
Query: 179 TVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVL 237
VH+PYR + ++ S D L + ++ +LTD LL+ P IA+ A++
Sbjct: 149 IVHHPYRTLSELQPELSLTS---DEVALAWSV---INDHYLTDLSLLYPPHIIAVMAII 201
>UNIPROTKB|Q29AI1 [details] [associations]
symbol:CycC "Cyclin-C" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0016592 "mediator complex" evidence=ISS]
InterPro:IPR004367 InterPro:IPR015429 InterPro:IPR023598
Pfam:PF02984 PIRSF:PIRSF028758 GO:GO:0000079 EMBL:CM000070
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GenomeReviews:CM000070_GR GO:GO:0016591 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 OMA:FFANVIQ
GO:GO:0016592 OrthoDB:EOG4GF1X0 GO:GO:0001104 RefSeq:XP_001358231.1
ProteinModelPortal:Q29AI1 GeneID:4801070 KEGG:dpo:Dpse_GA20234
FlyBase:FBgn0080229 InParanoid:Q29AI1 Uniprot:Q29AI1
Length = 267
Score = 157 (60.3 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 66/211 (31%), Positives = 97/211 (45%)
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFN-LSISQFVS----NIKGDQ 156
VI TA Y KRFY NS+ + P + TC+ LA KVEEF +S S+ +S IK
Sbjct: 61 VIATATVYFKRFYARNSLKNIDPLLLAPTCILLASKVEEFGVISNSRLISICQSAIKTKF 120
Query: 157 QKA--------SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRP 208
A ++ IL E L++ L L V+ PYRP+ + D+ QL
Sbjct: 121 SYAYTQEFPYRTNHILECEFYLLENLDCCLIVYQPYRPLLQLVQDMGQEDQLLTLSW--- 177
Query: 209 GIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANVRLVDLI 268
++ TD CLL+ P QIA+A LQ A + + D+ T+ + NV L +
Sbjct: 178 ---RIVNDSLRTDVCLLYPPYQIAIAC-LQIACVILQK-DS--TKQWFAE-LNVDLDKVQ 229
Query: 269 EAVRKIRTLVSKPIESPSREMFKQLEKRLEK 299
E VR I L + ++ + L ++ K
Sbjct: 230 EIVRAIVNLYEMWKDWKEKDEIQMLLSKIPK 260
>RGD|70905 [details] [associations]
symbol:Ccnc "cyclin C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell cycle"
evidence=TAS] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA;ISO] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
PANTHER:PTHR10026 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX GO:GO:0016592
EMBL:D14013 IPI:IPI00199131 UniGene:Rn.106758
ProteinModelPortal:P39947 STRING:P39947 UCSC:RGD:70905
InParanoid:P39947 ArrayExpress:P39947 Genevestigator:P39947
GermOnline:ENSRNOG00000007719 Uniprot:P39947
Length = 278
Score = 150 (57.9 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 57/161 (35%), Positives = 78/161 (48%)
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEF----NLS-ISQFVSNIKGDQ 156
VI TA Y KRFY S+ P + TCV+LA KVEEF N S I+ S +K
Sbjct: 56 VIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRF 115
Query: 157 QKAS--------DIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRP 208
AS + IL E L++ + L V++PYRP+ ++ D + D L P
Sbjct: 116 SYASPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDVLLP 169
Query: 209 GIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDA 249
++ + TD CLL+ P IALA L A +Q+ DA
Sbjct: 170 LAWRIVNDTYRTDLCLLYPPFMIALAC-LHVACVVQQK-DA 208
>UNIPROTKB|P39947 [details] [associations]
symbol:Ccnc "Cyclin-C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 GO:GO:0006351 GO:GO:0007049
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
PANTHER:PTHR10026 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX
GO:GO:0016592 EMBL:D14013 IPI:IPI00199131 UniGene:Rn.106758
ProteinModelPortal:P39947 STRING:P39947 UCSC:RGD:70905
InParanoid:P39947 ArrayExpress:P39947 Genevestigator:P39947
GermOnline:ENSRNOG00000007719 Uniprot:P39947
Length = 278
Score = 150 (57.9 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 57/161 (35%), Positives = 78/161 (48%)
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEF----NLS-ISQFVSNIKGDQ 156
VI TA Y KRFY S+ P + TCV+LA KVEEF N S I+ S +K
Sbjct: 56 VIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTSLIAATTSVLKTRF 115
Query: 157 QKAS--------DIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRP 208
AS + IL E L++ + L V++PYRP+ ++ D + D L P
Sbjct: 116 SYASPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDVLLP 169
Query: 209 GIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDA 249
++ + TD CLL+ P IALA L A +Q+ DA
Sbjct: 170 LAWRIVNDTYRTDLCLLYPPFMIALAC-LHVACVVQQK-DA 208
>UNIPROTKB|Q91031 [details] [associations]
symbol:CCNC "Cyclin C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
HOGENOM:HOG000008007 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX GO:GO:0016592 UniGene:Gga.9076
EMBL:AADN02002249 EMBL:U40875 EMBL:U40876 EMBL:U40877 EMBL:U40886
EMBL:U40879 EMBL:U40880 EMBL:U40881 EMBL:U40882 EMBL:U40883
EMBL:U40884 EMBL:U40885 IPI:IPI00820099 STRING:Q91031
Ensembl:ENSGALT00000037233 InParanoid:Q91031 Uniprot:Q91031
Length = 272
Score = 148 (57.2 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 63/210 (30%), Positives = 95/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 3 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 60
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + IS S +K A
Sbjct: 61 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYR 120
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 121 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLPLAWRIVNDTYR 174
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 175 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 202
>UNIPROTKB|F1RXY0 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016592 "mediator complex" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0016591 "DNA-directed
RNA polymerase II, holoenzyme" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:FFANVIQ
GO:GO:0016592 EMBL:CU041276 Ensembl:ENSSSCT00000004810
Uniprot:F1RXY0
Length = 282
Score = 148 (57.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 61/209 (29%), Positives = 97/209 (46%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNL-SISQFVSNIKG-DQQKAS---------- 160
FY S+ P + TCV+LA KVEEF + S ++ +S + + S
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVSKTRFSYAFPRFPYRM 131
Query: 161 DIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFLT 220
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ + T
Sbjct: 132 NHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLPLAWRIVNDTYRT 185
Query: 221 DACLLFSPSQIALAAVLQSASKLQENLDA 249
D CLL+ P IALA L A +Q+ DA
Sbjct: 186 DLCLLYPPFMIALAC-LHVACVVQQK-DA 212
>UNIPROTKB|P55168 [details] [associations]
symbol:CCNC "Cyclin-C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 CTD:892 GeneTree:ENSGT00690000101911
HOVERGEN:HBG050836 OMA:FFANVIQ OrthoDB:EOG4G1MGX GO:GO:0016592
EMBL:U40873 IPI:IPI00954739 RefSeq:NP_001161237.1 UniGene:Gga.9076
ProteinModelPortal:P55168 STRING:P55168 Ensembl:ENSGALT00000024947
GeneID:421791 KEGG:gga:421791 InParanoid:P55168 NextBio:20824510
ArrayExpress:P55168 Uniprot:P55168
Length = 283
Score = 148 (57.2 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 63/210 (30%), Positives = 95/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + IS S +K A
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYR 131
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 132 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLPLAWRIVNDTYR 185
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 186 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 213
>UNIPROTKB|F1PGM0 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 OMA:FFANVIQ EMBL:AAEX03008558
EMBL:AAEX03008559 Ensembl:ENSCAFT00000005668 Uniprot:F1PGM0
Length = 284
Score = 148 (57.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 63/210 (30%), Positives = 95/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 15 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 72
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + IS S +K A
Sbjct: 73 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYR 132
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 133 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLPLAWRIVNDTYR 186
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 187 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 214
>UNIPROTKB|H0YBQ5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
Ensembl:ENST00000486428 Bgee:H0YBQ5 Uniprot:H0YBQ5
Length = 228
Score = 144 (55.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 54/161 (33%), Positives = 76/161 (47%)
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQ 156
VI TA Y KRFY S+ P + TCV+LA KVEEF + I+ S +K
Sbjct: 7 VIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRF 66
Query: 157 QKA--------SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRP 208
A + IL E L++ + L V++PYRP+ ++ D + D L P
Sbjct: 67 SYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLP 120
Query: 209 GIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDA 249
++ + TD CLL+ P IALA L A +Q+ DA
Sbjct: 121 LAWRIVNDTYRTDLCLLYPPFMIALAC-LHVACVVQQK-DA 159
>ZFIN|ZDB-GENE-030131-7369 [details] [associations]
symbol:ccnc "cyclin C" species:7955 "Danio rerio"
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
ZFIN:ZDB-GENE-030131-7369 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161 PANTHER:PTHR10026
CTD:892 HOVERGEN:HBG050836 OrthoDB:EOG4G1MGX EMBL:BC060903
EMBL:AY398320 EMBL:AY450302 IPI:IPI00497140 RefSeq:NP_956245.1
UniGene:Dr.151536 STRING:Q6STL0 GeneID:335429 KEGG:dre:335429
InParanoid:Q6STL0 NextBio:20810840 Uniprot:Q6STL0
Length = 283
Score = 147 (56.8 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 55/161 (34%), Positives = 76/161 (47%)
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQ 156
VI TA Y KRFY S+ P + TCV+LA KVEEF + IS S +K
Sbjct: 61 VIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRF 120
Query: 157 QKA--------SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRP 208
A + IL E L++ + L V++PYRP+ ++ D + D L P
Sbjct: 121 SYAFPKEFPFRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLP 174
Query: 209 GIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDA 249
++ + TD CLL+ P IALA L A +Q+ DA
Sbjct: 175 LAWRIVNDTYRTDLCLLYPPFMIALAC-LHVACVVQQK-DA 213
>UNIPROTKB|G5E954 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 EMBL:CH471051 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784
UniGene:Hs.430646 UniGene:Hs.633351 HGNC:HGNC:1581
ProteinModelPortal:G5E954 SMR:G5E954 Ensembl:ENST00000326298
ArrayExpress:G5E954 Bgee:G5E954 Uniprot:G5E954
Length = 202
Score = 138 (53.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/194 (28%), Positives = 87/194 (44%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + I+ S +K A
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYR 131
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 132 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLPLAWRIVNDTYR 185
Query: 220 TDACLLFSPSQIAL 233
TD CLL+ P IAL
Sbjct: 186 TDLCLLYPPFMIAL 199
>UNIPROTKB|E5RFK5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
IPI:IPI00979643 SMR:E5RFK5 Ensembl:ENST00000518714
Ensembl:ENST00000520371 Uniprot:E5RFK5
Length = 282
Score = 145 (56.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 62/210 (29%), Positives = 95/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + I+ S +K A
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYR 131
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 132 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLPLAWRIVNDTYR 185
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 186 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 213
>UNIPROTKB|P24863 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0000079
GO:GO:0005654 GO:GO:0045944 GO:GO:0007219 GO:GO:0007179
GO:GO:0006367 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 CTD:892 HOVERGEN:HBG050836 OMA:FFANVIQ
OrthoDB:EOG4G1MGX GO:GO:0016592 EMBL:M74091 EMBL:U40739 EMBL:U40728
EMBL:U40729 EMBL:U40730 EMBL:U40731 EMBL:U40732 EMBL:U40733
EMBL:U40734 EMBL:U40735 EMBL:U40736 EMBL:U40737 EMBL:U40738
EMBL:AK298558 EMBL:AL137784 IPI:IPI00031076 IPI:IPI00554688
PIR:A40268 RefSeq:NP_001013417.1 RefSeq:NP_005181.2
UniGene:Hs.430646 UniGene:Hs.633351 PDB:3RGF PDBsum:3RGF
ProteinModelPortal:P24863 SMR:P24863 DIP:DIP-32920N IntAct:P24863
STRING:P24863 PhosphoSite:P24863 DMDM:166214910 PRIDE:P24863
DNASU:892 Ensembl:ENST00000520429 Ensembl:ENST00000523799
Ensembl:ENST00000523985 GeneID:892 KEGG:hsa:892 UCSC:uc003pqd.3
GeneCards:GC06M100037 HGNC:HGNC:1581 HPA:CAB010499 MIM:123838
neXtProt:NX_P24863 PharmGKB:PA26149 InParanoid:P24863
GenomeRNAi:892 NextBio:3690 ArrayExpress:P24863 Bgee:P24863
CleanEx:HS_CCNC Genevestigator:P24863 GermOnline:ENSG00000112237
Uniprot:P24863
Length = 283
Score = 145 (56.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 62/210 (29%), Positives = 95/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + I+ S +K A
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYR 131
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 132 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLPLAWRIVNDTYR 185
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 186 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 213
>UNIPROTKB|Q3ZCK5 [details] [associations]
symbol:CCNC "Cyclin-C" species:9913 "Bos taurus"
[GO:0016592 "mediator complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] InterPro:IPR015429
InterPro:IPR023598 PIRSF:PIRSF028758 GO:GO:0000079 GO:GO:0006355
GO:GO:0006351 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007
KO:K15161 PANTHER:PTHR10026 EMBL:BC102107 IPI:IPI00709203
RefSeq:NP_001029530.1 UniGene:Bt.16282 HSSP:O94503
ProteinModelPortal:Q3ZCK5 STRING:Q3ZCK5 PRIDE:Q3ZCK5
Ensembl:ENSBTAT00000037858 GeneID:509717 KEGG:bta:509717 CTD:892
GeneTree:ENSGT00690000101911 HOVERGEN:HBG050836 InParanoid:Q3ZCK5
OMA:FFANVIQ OrthoDB:EOG4G1MGX NextBio:20869092 GO:GO:0016592
Uniprot:Q3ZCK5
Length = 283
Score = 144 (55.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 61/210 (29%), Positives = 95/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + I+ S +K A
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYK 131
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ +L E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 132 MNHVLECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLPLAWRIVNDTYR 185
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 186 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 213
>MGI|MGI:1858199 [details] [associations]
symbol:Ccnc "cyclin C" species:10090 "Mus musculus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016591 "DNA-directed RNA
polymerase II, holoenzyme" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IDA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
MGI:MGI:1858199 GO:GO:0000079 GO:GO:0006355 GO:GO:0006351
Reactome:REACT_127416 EMBL:CH466538 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 GO:GO:0016591 Reactome:REACT_27166 PROSITE:PS00292
eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161 PANTHER:PTHR10026
CTD:892 GeneTree:ENSGT00690000101911 HOVERGEN:HBG050836 OMA:FFANVIQ
GO:GO:0016592 EMBL:U62638 EMBL:U49050 EMBL:AL772187 EMBL:BC003344
EMBL:BC120649 EMBL:BC120677 EMBL:AJ243075 EMBL:AJ243076
IPI:IPI00126002 IPI:IPI00880396 RefSeq:NP_058026.2
UniGene:Mm.278584 ProteinModelPortal:Q62447 STRING:Q62447
PhosphoSite:Q62447 PRIDE:Q62447 Ensembl:ENSMUST00000102997
GeneID:51813 KEGG:mmu:51813 InParanoid:Q62447 NextBio:308072
CleanEx:MM_CCNC Genevestigator:Q62447 GermOnline:ENSMUSG00000028252
Uniprot:Q62447
Length = 283
Score = 143 (55.4 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 62/210 (29%), Positives = 95/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + I+ S +K A
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVLKTRFSYAFPKEFPYR 131
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 132 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDVLLPLAWRIVNDTYR 185
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 186 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 213
>UNIPROTKB|J3KP90 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 EMBL:AL137784 HGNC:HGNC:1581
ProteinModelPortal:J3KP90 Ensembl:ENST00000369220 Uniprot:J3KP90
Length = 282
Score = 142 (55.0 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 62/210 (29%), Positives = 96/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + I+ S +K A
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAAATSVLKTRFSYAFPKEFPYR 131
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P + ++ +
Sbjct: 132 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDMLLP-LAWIVNDTYR 184
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 185 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 212
>UNIPROTKB|F1LNZ0 [details] [associations]
symbol:Ccnc "Cyclin-C" species:10116 "Rattus norvegicus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758 RGD:70905
GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 PANTHER:PTHR10026 OMA:FFANVIQ GO:GO:0016592
IPI:IPI00190351 Ensembl:ENSRNOT00000043469 ArrayExpress:F1LNZ0
Uniprot:F1LNZ0
Length = 333
Score = 143 (55.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 62/210 (29%), Positives = 95/210 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 64 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 121
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + I+ S +K A
Sbjct: 122 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVLKTRFSYAFPKEFPYR 181
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFLDKMFL 219
+ IL E L++ + L V++PYRP+ ++ D + D L P ++ +
Sbjct: 182 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDVLLPLAWRIVNDTYR 235
Query: 220 TDACLLFSPSQIALAAVLQSASKLQENLDA 249
TD CLL+ P IALA L A +Q+ DA
Sbjct: 236 TDLCLLYPPFMIALAC-LHVACVVQQK-DA 263
>TAIR|locus:2008698 [details] [associations]
symbol:CYCT1;1 "cyclin T1;1" species:3702 "Arabidopsis
thaliana" [GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR015429
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000079 GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
EMBL:AC023064 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 IPI:IPI00532594 PIR:E86475
RefSeq:NP_174775.1 UniGene:At.65959 ProteinModelPortal:Q9C8P7
SMR:Q9C8P7 EnsemblPlants:AT1G35440.1 GeneID:840436
KEGG:ath:AT1G35440 GeneFarm:4111 TAIR:At1g35440 InParanoid:Q9C8P7
OMA:WNFANDS PhylomeDB:Q9C8P7 ProtClustDB:CLSN2914362
Genevestigator:Q9C8P7 Uniprot:Q9C8P7
Length = 247
Score = 136 (52.9 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 42/148 (28%), Positives = 69/148 (46%)
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQ--FVS-NIKGD 155
P+ I TA +RF+ S+ PK + + C+++A KVE FVS + +
Sbjct: 51 PQKTIATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFN 110
Query: 156 QQKASDI-------ILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRP 208
++ D+ +L E L++ L+ L + +PY+ V + +K + D RL
Sbjct: 111 KEPLRDVFERLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDW---VKRSVKTEDGRRLCQ 167
Query: 209 GIDEFLDKMFLTDACLLFSPSQIALAAV 236
F++ T CL F PSQIA AA+
Sbjct: 168 AAFNFVNDSLRTSLCLQFGPSQIASAAI 195
>SGD|S000004970 [details] [associations]
symbol:SSN8 "Cyclin-like component of the RNA polymerase II
holoenzyme" species:4932 "Saccharomyces cerevisiae" [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IDA]
[GO:0010673 "positive regulation of transcription from RNA
polymerase II promoter during meiosis" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0016538 "cyclin-dependent protein
serine/threonine kinase regulator activity" evidence=ISS;IMP;IPI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000411 "positive regulation of transcription by galactose"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
SGD:S000004970 GO:GO:0000079 EMBL:BK006947 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
GO:GO:0016591 GO:GO:0010673 GO:GO:0016538 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 GO:GO:0016592 GO:GO:0000411
EMBL:Z71301 OrthoDB:EOG4BZRBH HOGENOM:HOG000217621 EMBL:U20221
EMBL:U16248 EMBL:U20635 PIR:S59373 RefSeq:NP_014373.3
RefSeq:NP_014379.3 ProteinModelPortal:P47821 SMR:P47821
DIP:DIP-2007N IntAct:P47821 MINT:MINT-385997 STRING:P47821
EnsemblFungi:YNL025C GeneID:855706 GeneID:855712 KEGG:sce:YNL019C
KEGG:sce:YNL025C CYGD:YNL025c OMA:KVEECPQ NextBio:980046
Genevestigator:P47821 GermOnline:YNL025C Uniprot:P47821
Length = 323
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 45/149 (30%), Positives = 74/149 (49%)
Query: 103 IGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSN--------IKG 154
+ TA YL RF + SV + + ++ TCVYLACKVEE I VS I
Sbjct: 96 LATAHIYLSRFLIKASVREINLYMLVTTCVYLACKVEECPQYIRTLVSEARTLWPEFIPP 155
Query: 155 DQQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRS-QLR-DPDRLRPGIDE 212
D K ++ E L+++L+ +L VH+PY+ ++ + +K Q+ D L+
Sbjct: 156 DPTKVTEF----EFYLLEELESYLIVHHPYQSLKQIVQVLKQPPFQITLSSDDLQ-NCWS 210
Query: 213 FLDKMFLTDACLLFSPSQIALAAVLQSAS 241
++ ++ D LL+ P IA+A + + S
Sbjct: 211 LINDSYINDVHLLYPPHIIAVACLFITIS 239
>WB|WBGene00000506 [details] [associations]
symbol:cic-1 species:6239 "Caenorhabditis elegans"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016591
"DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR015429 InterPro:IPR023598 PIRSF:PIRSF028758
GO:GO:0007275 GO:GO:0000079 GO:GO:0006355 GO:GO:0006351
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 HOGENOM:HOG000008007 KO:K15161
PANTHER:PTHR10026 GeneTree:ENSGT00690000101911 OMA:FFANVIQ
EMBL:FO081521 PIR:T33884 RefSeq:NP_497548.2
ProteinModelPortal:Q9TYP2 SMR:Q9TYP2 EnsemblMetazoa:H14E04.5
GeneID:175357 KEGG:cel:CELE_H14E04.5 UCSC:H14E04.5 CTD:175357
WormBase:H14E04.5 InParanoid:Q9TYP2 NextBio:887802 Uniprot:Q9TYP2
Length = 302
Score = 134 (52.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 39/110 (35%), Positives = 56/110 (50%)
Query: 102 VIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFN-LSISQFVSNIK------- 153
VI TA Y KRFYL S D P + T ++LACKVEE LS+S F+ N
Sbjct: 70 VIATAIIYFKRFYLRQSFRDMCPFLVASTALFLACKVEEHTTLSVSSFLKNTAIVLPKRW 129
Query: 154 G----DQQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQ 199
G + ++ ++E +L++ L L VH+ RP+ L D+K +Q
Sbjct: 130 GVTFETTSTKNGVVYDSEFILVEILDCCLVVHHASRPMFELLEDLKQFTQ 179
>TAIR|locus:2122940 [details] [associations]
symbol:CYCT1;2 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR015429
GO:GO:0000079 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0051301
GO:GO:0006355 GO:GO:0007049 EMBL:AL161551 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 EMBL:AL021768 EMBL:AK221363
EMBL:AK221364 IPI:IPI00530189 PIR:T06149 RefSeq:NP_193691.2
UniGene:At.54410 ProteinModelPortal:Q56YF8 SMR:Q56YF8 PRIDE:Q56YF8
EnsemblPlants:AT4G19560.1 GeneID:827698 KEGG:ath:AT4G19560
GeneFarm:4112 TAIR:At4g19560 InParanoid:Q56YF8 OMA:DMASTEK
Genevestigator:Q56YF8 Uniprot:Q56YF8
Length = 460
Score = 136 (52.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 52/209 (24%), Positives = 95/209 (45%)
Query: 98 MPKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFV-------- 149
+P+V I TA + RF+L S + I C+ LA KVEE +++ +
Sbjct: 74 VPQVTIATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIH 133
Query: 150 -SNIKGDQQKA-----SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDP 203
++ G Q+K +++L E L++ L + L + +PY+P L++ + + D
Sbjct: 134 KKDLAGAQRKEVYDQQKELVLIGEELVLSTLNFDLCISHPYKP----LVEAIKKYMVEDA 189
Query: 204 D-RLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSASKLQENLDAYVTQTLLGQHANV 262
+L F++ T CL + P IA A+L +A +L +Y + +L Q ++
Sbjct: 190 KTQLAQFAWNFVNDCLRTTLCLQYQPHHIAAGAILLAAELPTVDLQSY--REVLCQEFDI 247
Query: 263 ---RLVDL----IEAVRKIRTLVSKPIES 284
+L D+ +E +I T +ES
Sbjct: 248 TPCQLEDIRGQILELYERIPTSQESKVES 276
>TAIR|locus:2122975 [details] [associations]
symbol:CYCT1;4 species:3702 "Arabidopsis thaliana"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0004693
"cyclin-dependent protein serine/threonine kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0009615 "response to
virus" evidence=IEP] [GO:0010090 "trichome morphogenesis"
evidence=IMP] [GO:0048366 "leaf development" evidence=IGI]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=RCA] [GO:0008284 "positive
regulation of cell proliferation" evidence=RCA] InterPro:IPR004367
InterPro:IPR015429 Pfam:PF02984 GO:GO:0005634 GO:GO:0000079
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0010090 GO:GO:0051301
GO:GO:0006355 GO:GO:0009615 GO:GO:0007049 GO:GO:0048366
EMBL:AL161551 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PROSITE:PS00292 eggNOG:COG5333 PANTHER:PTHR10026
HOGENOM:HOG000220828 KO:K15188 EMBL:AL021768 EMBL:AK117509
EMBL:BT029301 IPI:IPI00546432 PIR:T06153 RefSeq:NP_193695.2
UniGene:At.32800 ProteinModelPortal:Q8GYM6 SMR:Q8GYM6 STRING:Q8GYM6
PRIDE:Q8GYM6 EnsemblPlants:AT4G19600.1 GeneID:827702
KEGG:ath:AT4G19600 GeneFarm:4117 TAIR:At4g19600 InParanoid:Q8GYM6
OMA:IRQSHAR PhylomeDB:Q8GYM6 ProtClustDB:CLSN2679942
Genevestigator:Q8GYM6 Uniprot:Q8GYM6
Length = 541
Score = 90 (36.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 155 DQQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGIDEFL 214
+QQK ++ILN E +++ L + V++PY+P L++ + ++ + L F+
Sbjct: 152 EQQK--ELILNGEKIVLSTLGFDFNVYHPYKP----LVEAIKKFKVAQ-NALAQVAWNFV 204
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQENL 247
+ T CL F P IA A+ +A L+ L
Sbjct: 205 NDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL 237
Score = 85 (35.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 58 RAELTDEEASE-HFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKRFYLN 116
R E+ + S + +E L + Y L+D R +P+V I TA + RF++
Sbjct: 37 RKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLK--VPQVTIATAIIFCHRFFIR 94
Query: 117 NSVMDYHPKEILVTCVYLACKVEE 140
S + I C++LA KVEE
Sbjct: 95 QSHARNDRRTIATVCMFLAGKVEE 118
>WB|WBGene00009650 [details] [associations]
symbol:ccnk-1 species:6239 "Caenorhabditis elegans"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR015429 GO:GO:0008340 GO:GO:0002009 GO:GO:0006898
GO:GO:0040010 GO:GO:0000079 GO:GO:0006355 GO:GO:0040011
GO:GO:0006974 GO:GO:0040035 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
eggNOG:COG5333 PANTHER:PTHR10026 HOGENOM:HOG000220828
GeneTree:ENSGT00690000102036 EMBL:Z83226 PIR:T22123
RefSeq:NP_506615.2 UniGene:Cel.26816 ProteinModelPortal:O17869
SMR:O17869 STRING:O17869 PaxDb:O17869 EnsemblMetazoa:F43D2.1
GeneID:185704 KEGG:cel:CELE_F43D2.1 UCSC:F43D2.1 CTD:185704
WormBase:F43D2.1 InParanoid:O17869 OMA:QMIAIAL NextBio:929208
Uniprot:O17869
Length = 252
Score = 120 (47.3 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 40/166 (24%), Positives = 75/166 (45%)
Query: 99 PKVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEF--------NLSISQFVS 150
P+ IG A Y RFY+ +S + + ++C++LA KVE+F +++ +
Sbjct: 48 PRPTIGVAAVYFHRFYMIHSFQSFSREVTALSCLFLAGKVEDFPKKCKDVCQAAVTHY-P 106
Query: 151 NIKGDQQKASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIKTRSQLRDPDRLRPGI 210
I Q D ++ E +L+ LK+ L V PY L+D K + +++ +
Sbjct: 107 EIYSKYQNLVDDVMGLERVLLHSLKFDLHVALPYDA----LLDYKMMFPDMNREKITDAV 162
Query: 211 D---EFLDKMFLTDACLLFSPSQIALAAV-----LQSASKLQENLD 248
F++ T C+ P IA+A + ++ +Q+N+D
Sbjct: 163 QIAWTFINDSIYTTLCITTEPQMIAIALLHLAFTVKGYQPVQKNMD 208
>ASPGD|ASPL0000078061 [details] [associations]
symbol:pchA species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000079 "regulation
of cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:1901407 "regulation of phosphorylation of RNA polymerase II
C-terminal domain" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR004367 InterPro:IPR015429 Pfam:PF02984
GO:GO:0005634 GO:GO:0000079 GO:GO:0006355 EMBL:BN001303
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 EMBL:AACD01000084
eggNOG:COG5333 PANTHER:PTHR10026 OrthoDB:EOG4WWVTW
RefSeq:XP_662585.1 ProteinModelPortal:Q5B399 STRING:Q5B399
EnsemblFungi:CADANIAT00005414 GeneID:2872782 KEGG:ani:AN4981.2
HOGENOM:HOG000196737 OMA:GHNTMAT Uniprot:Q5B399
Length = 513
Score = 123 (48.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 48/166 (28%), Positives = 77/166 (46%)
Query: 98 MPKVVIGTAFHYLKRFYLNNSVMD------YHPKEILVTCVYLACKVEEFNLS------- 144
+P+ + TA YL RF++ ++ D HP I T ++LA KVEE N+
Sbjct: 68 LPQPTLATAAVYLHRFFMRYAIADKPERPGIHPYPIAATSLFLATKVEE-NVRRMKELVI 126
Query: 145 ----ISQFVSNIKGDQQ-----KASDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDIK 195
++Q ++ D+Q K D IL++E +L++ L + L + PYR + F+ +
Sbjct: 127 AVCRVAQKKPDLVVDEQSKEFWKWRDTILHHEDILLEALCFDLQLEQPYRILYDFICFFR 186
Query: 196 TRSQLRDPDRLRPGIDEFLDKMFLTDACLLFSPSQIALAAVLQSAS 241
+ D +R FL+ T CL F IA AA +AS
Sbjct: 187 ----VNDNKHIRNSSWAFLNDSMYTVLCLQFPARVIAAAAFYAAAS 228
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 293 LEKRLEKCRNQANNPDSHIYKERMLESLNDDDESAARR---YSQLSQKEN 339
+++R+++ Q + P ++ E DD+++ +R YS ++ E+
Sbjct: 430 IQQRIDQIVQQNSVPPKRATADKYRERDRDDEDAYQKRRPSYSSSTRNEH 479
>POMBASE|SPBC12D12.06 [details] [associations]
symbol:srb11 "cyclin CycC, Srb mediator subunit Srb11"
species:4896 "Schizosaccharomyces pombe" [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IC] [GO:0016591 "DNA-directed RNA
polymerase II, holoenzyme" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IDA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR015429 InterPro:IPR023598
PIRSF:PIRSF028758 PomBase:SPBC12D12.06 GO:GO:0000079 EMBL:CU329671
GO:GO:0006357 GO:GO:0006351 GenomeReviews:CU329671_GR
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 GO:GO:0016591
PROSITE:PS00292 eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026
GO:GO:0016592 PIR:T39386 RefSeq:NP_595953.1 PDB:1ZP2 PDBsum:1ZP2
ProteinModelPortal:O94503 SMR:O94503 STRING:O94503
EnsemblFungi:SPBC12D12.06.1 GeneID:2539651 KEGG:spo:SPBC12D12.06
OrthoDB:EOG4BZRBH EvolutionaryTrace:O94503 NextBio:20800805
Uniprot:O94503
Length = 228
Score = 114 (45.2 bits), Expect = 0.00026, P = 0.00026
Identities = 44/152 (28%), Positives = 72/152 (47%)
Query: 102 VIGTAFHYLKRFYLN-NSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKGD----Q 156
V+ TA L+R+ L N + + ++ TC+YL+CKVEE + I + + N D +
Sbjct: 52 VLATAIVLLRRYMLKKNEEKGFSLEALVATCIYLSCKVEECPVHI-RTICNEANDLWSLK 110
Query: 157 QKASDIILNN-ELLLMQQLKYHLTVHNPYRPVEGFLID-IKTRSQLRDPDRLRPGIDEFL 214
K S ++ E ++ L L VH+PY +E D I + QL + +
Sbjct: 111 VKLSRSNISEIEFEIISVLDAFLIVHHPYTSLEQAFHDGIINQKQLEFAWSI-------V 163
Query: 215 DKMFLTDACLLFSPSQIALAAVLQSASKLQEN 246
+ + + CL+ P Q+A AA+L S EN
Sbjct: 164 NDSYASSLCLMAHPHQLAYAALLISCCN-DEN 194
>UNIPROTKB|F1NTI7 [details] [associations]
symbol:CCNC "Cyclin-C" species:9031 "Gallus gallus"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA]
InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355 Gene3D:1.10.472.10
InterPro:IPR013763 InterPro:IPR006671 Pfam:PF00134 SMART:SM00385
SUPFAM:SSF47954 PANTHER:PTHR10026 GeneTree:ENSGT00690000101911
EMBL:AADN02002249 IPI:IPI00600334 Ensembl:ENSGALT00000037234
ArrayExpress:F1NTI7 Uniprot:F1NTI7
Length = 177
Score = 110 (43.8 bits), Expect = 0.00027, P = 0.00027
Identities = 45/155 (29%), Positives = 71/155 (45%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNLS-----ISQFVSNIKGDQQKA-------- 159
FY S+ P + TCV+LA KVEEF + IS S +K A
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLISAATSVLKTRFSYAFPKEFPYR 131
Query: 160 SDIILNNELLLMQQLKYHLTVHNPYRPVEGFLIDI 194
+ IL E L++ + L V++PYRP+ ++ D+
Sbjct: 132 MNHILECEFYLLELMDCCLIVYHPYRPLLQYVQDM 166
>UNIPROTKB|E5RIH8 [details] [associations]
symbol:CCNC "Cyclin-C" species:9606 "Homo sapiens"
[GO:0000079 "regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR015429 GO:GO:0000079
GO:GO:0006355 Gene3D:1.10.472.10 InterPro:IPR013763
InterPro:IPR006671 Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954
PANTHER:PTHR10026 GO:GO:0016592 EMBL:AL137784 HGNC:HGNC:1581
IPI:IPI00979024 ProteinModelPortal:E5RIH8 SMR:E5RIH8
Ensembl:ENST00000484049 ArrayExpress:E5RIH8 Bgee:E5RIH8
Uniprot:E5RIH8
Length = 114
Score = 96 (38.9 bits), Expect = 0.00033, P = 0.00033
Identities = 29/91 (31%), Positives = 44/91 (48%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 14 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 71
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNL 143
FY S+ P + TCV+LA KVEEF +
Sbjct: 72 FYARYSLKSIDPVLMAPTCVFLASKVEEFGV 102
>CGD|CAL0004675 [details] [associations]
symbol:SSN8 species:5476 "Candida albicans" [GO:0031505
"fungal-type cell wall organization" evidence=IMP] [GO:0016538
"cyclin-dependent protein serine/threonine kinase regulator
activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0010673
"positive regulation of transcription from RNA polymerase II
promoter during meiosis" evidence=IEA] [GO:0000411 "positive
regulation of transcription by galactose" evidence=IEA]
InterPro:IPR015429 CGD:CAL0004675 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0006351 GO:GO:0031505 EMBL:AACQ01000066
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 HSSP:O94503
RefSeq:XP_716596.1 ProteinModelPortal:Q5A4H9 STRING:Q5A4H9
GeneID:3641718 KEGG:cal:CaO19.7355 Uniprot:Q5A4H9
Length = 434
Score = 121 (47.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/155 (24%), Positives = 74/155 (47%)
Query: 100 KVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKG--DQQ 157
++ + TA YL RF S+ + + ++ TC+Y+ACK+EE I +S + +
Sbjct: 72 QIALATAEIYLTRFLTRVSLKEINVYLLITTCIYVACKIEECPQHIRLILSEARNIWPEY 131
Query: 158 KASDI--ILNNELLLMQQLKYHLTVHNPYRP---VEGFLIDIKTRSQLRDPDRLRPGIDE 212
D+ + E L++++ +L +H+PY+ + FL + +
Sbjct: 132 IPHDVTKLAEFEFYLIEEMDSYLLLHHPYKSLMQINEFLSNNYNVFGFKLTVEELQNAWS 191
Query: 213 FLDKMFLTDACLLFSPSQIALAAVLQSASKLQENL 247
++ ++TD LL P IA+AA+ + L++NL
Sbjct: 192 LINDSYITDLHLLLPPHTIAVAAIYITVV-LKKNL 225
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 5/20 (25%), Positives = 15/20 (75%)
Query: 258 QHANVRLVDLIEAVRKIRTL 277
+H+++ L +++EAV+ + +
Sbjct: 391 EHSHINLDEVVEAVQDMMNM 410
>UNIPROTKB|Q5A4H9 [details] [associations]
symbol:SSN8 "RNA polymerase II holoenzyme cyclin-like
subunit" species:237561 "Candida albicans SC5314" [GO:0031505
"fungal-type cell wall organization" evidence=IMP]
InterPro:IPR015429 CGD:CAL0004675 GO:GO:0005634 GO:GO:0000079
GO:GO:0006355 GO:GO:0006351 GO:GO:0031505 EMBL:AACQ01000066
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PROSITE:PS00292
eggNOG:COG5333 KO:K15161 PANTHER:PTHR10026 HSSP:O94503
RefSeq:XP_716596.1 ProteinModelPortal:Q5A4H9 STRING:Q5A4H9
GeneID:3641718 KEGG:cal:CaO19.7355 Uniprot:Q5A4H9
Length = 434
Score = 121 (47.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/155 (24%), Positives = 74/155 (47%)
Query: 100 KVVIGTAFHYLKRFYLNNSVMDYHPKEILVTCVYLACKVEEFNLSISQFVSNIKG--DQQ 157
++ + TA YL RF S+ + + ++ TC+Y+ACK+EE I +S + +
Sbjct: 72 QIALATAEIYLTRFLTRVSLKEINVYLLITTCIYVACKIEECPQHIRLILSEARNIWPEY 131
Query: 158 KASDI--ILNNELLLMQQLKYHLTVHNPYRP---VEGFLIDIKTRSQLRDPDRLRPGIDE 212
D+ + E L++++ +L +H+PY+ + FL + +
Sbjct: 132 IPHDVTKLAEFEFYLIEEMDSYLLLHHPYKSLMQINEFLSNNYNVFGFKLTVEELQNAWS 191
Query: 213 FLDKMFLTDACLLFSPSQIALAAVLQSASKLQENL 247
++ ++TD LL P IA+AA+ + L++NL
Sbjct: 192 LINDSYITDLHLLLPPHTIAVAAIYITVV-LKKNL 225
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 5/20 (25%), Positives = 15/20 (75%)
Query: 258 QHANVRLVDLIEAVRKIRTL 277
+H+++ L +++EAV+ + +
Sbjct: 391 EHSHINLDEVVEAVQDMMNM 410
>UNIPROTKB|J9NXY6 [details] [associations]
symbol:CCNC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR015429 GO:GO:0000079 GO:GO:0006355
Gene3D:1.10.472.10 InterPro:IPR013763 InterPro:IPR006671
Pfam:PF00134 SMART:SM00385 SUPFAM:SSF47954 PANTHER:PTHR10026
GeneTree:ENSGT00690000101911 EMBL:AAEX03008558 EMBL:AAEX03008559
Ensembl:ENSCAFT00000047644 Uniprot:J9NXY6
Length = 148
Score = 97 (39.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 53 FILEHRAELTDEEASEHFLSASEERVLVRHYQLQLRDFCKRFSPPMPKVVIGTAFHYLKR 112
+IL+ + L + + FLS E L + ++ + + + VI TA Y KR
Sbjct: 9 WILDKQDLLKERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLK--LRQQVIATATVYFKR 66
Query: 113 FYLNNSVMDYHPKEILVTCVYLACKVEEFNL-SISQFVS 150
FY S+ P + TCV+LA KVEEF + S ++ +S
Sbjct: 67 FYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIS 105
Score = 39 (18.8 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 257 GQHANVRLVDLIEAVRKIRTLVSKPIESPSR 287
G +N RL+ +V K R + P E P R
Sbjct: 96 GVVSNTRLISAATSVLKTRFSYAFPKEFPYR 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 352 352 0.00078 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 609 (65 KB)
Total size of DFA: 226 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.31u 0.10s 33.41t Elapsed: 00:00:02
Total cpu time: 33.32u 0.10s 33.42t Elapsed: 00:00:02
Start: Thu Aug 15 10:50:58 2013 End: Thu Aug 15 10:51:00 2013