Diaphorina citri psyllid: psy7374


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
MIIETTPISSYHNHKRRRGSPIRKSQRDRDDRSRSPPEISSSTSGGDDASLDVCQTPPLNPLLQERFNSEELRHVTCHLETKELWDKFNELGTEMIITKTGRKLFQ
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccHHHHHHHHHccccEEEEcccccccc
******************************************************************FNSEELRHVTCHLETKELWDKFNELGTEMIITKTGRKLF*
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MIIETTPISSYHNHKRRRGSPIRKSQRDRDDRSRSPPEISSSTSGGDDASLDVCQTPPLNPLLQERFNSEELRHVTCHLETKELWDKFNELGTEMIITKTGRKLFQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
T-box transcription factor TBX20 Probable transcriptional regulator involved in developmental processes.confidentQ8UW76
T-box transcription factor TBX20 Probable transcriptional regulator involved in developmental processes.confidentQ9UMR3
T-box transcription factor TBX20 Probable transcriptional regulator involved in developmental processes.confidentQ3SA46

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0000977 [MF]RNA polymerase II regulatory region sequence-specific DNA bindingprobableGO:0043565, GO:0044212, GO:0001067, GO:0003677, GO:0001012, GO:0000976, GO:0005488, GO:0003676, GO:0000975, GO:0003674, GO:0097159, GO:1901363
GO:0048598 [BP]embryonic morphogenesisprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0009653, GO:0007275, GO:0044699
GO:0001105 [MF]RNA polymerase II transcription coactivator activityprobableGO:0001190, GO:0003713, GO:0003712, GO:0001104, GO:0001076, GO:0003674, GO:0000989, GO:0000988
GO:0048514 [BP]blood vessel morphogenesisprobableGO:0032502, GO:0032501, GO:0044707, GO:0001568, GO:0048856, GO:0001944, GO:0044767, GO:0072359, GO:0072358, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0003007 [BP]heart morphogenesisprobableGO:0032502, GO:0007507, GO:0009887, GO:0032501, GO:0044707, GO:0048513, GO:0048856, GO:0044767, GO:0072359, GO:0072358, GO:0008150, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0048646 [BP]anatomical structure formation involved in morphogenesisprobableGO:0032502, GO:0009653, GO:0008150, GO:0048856
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0010991 [BP]negative regulation of SMAD protein complex assemblyprobableGO:0048585, GO:0048583, GO:0051129, GO:0051128, GO:0023057, GO:0010648, GO:0023051, GO:0010646, GO:0050789, GO:0044699, GO:0009968, GO:0090101, GO:0009966, GO:0065007, GO:0048519, GO:0010990, GO:0090092, GO:0009987, GO:0031333, GO:0050794, GO:0044763, GO:0043254, GO:0044087, GO:0008150, GO:0048523
GO:0007389 [BP]pattern specification processprobableGO:0032502, GO:0032501, GO:0044707, GO:0008150, GO:0007275, GO:0044699
GO:0048729 [BP]tissue morphogenesisprobableGO:0032502, GO:0048856, GO:0009888, GO:0044767, GO:0008150, GO:0009653, GO:0044699
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0060429 [BP]epithelium developmentprobableGO:0032502, GO:0048856, GO:0008150, GO:0009888
GO:0045944 [BP]positive regulation of transcription from RNA polymerase II promoterprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:2001141, GO:0031323, GO:0010628, GO:0050789, GO:0080090, GO:0010604, GO:0051171, GO:0009891, GO:2000112, GO:0019219, GO:0010556, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009889, GO:0050794, GO:0008150, GO:0045893, GO:0051173, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0006357, GO:0048522

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2X6U, chain A
Confidence level:very confident
Coverage over the Query: 73-105
View the alignment between query and template
View the model in PyMOL