RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7377
         (83 letters)



>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
           subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 356

 Score = 24.2 bits (51), Expect = 2.3
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 3   IADHEVFAFPSEEEADKVLSIPDVEQRIKDVLMVLGNFKQYRD 45
           IA      F  E++ +  +    VE+  K     +  F QY+D
Sbjct: 312 IAAKAAVRFILEQKPNPEIDDAVVEELKKKAYAPMERFMQYKD 354


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.140    0.406 

Gapped
Lambda     K      H
   0.267   0.0641    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 311,202
Number of extensions: 12205
Number of successful extensions: 42
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42
Number of HSP's successfully gapped: 6
Length of query: 83
Length of database: 2,407,596
Length adjustment: 49
Effective length of query: 34
Effective length of database: 1,734,826
Effective search space: 58984084
Effective search space used: 58984084
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 47 (22.1 bits)