Query psy7378
Match_columns 90
No_of_seqs 104 out of 1006
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 16:43:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 99.7 1.4E-17 4.7E-22 128.0 5.4 53 11-67 251-303 (359)
2 3m4x_A NOL1/NOP2/SUN family pr 99.6 3.6E-15 1.2E-19 117.4 6.5 57 14-74 204-260 (456)
3 3m6w_A RRNA methylase; rRNA me 99.5 9.4E-15 3.2E-19 115.3 6.0 59 13-75 198-257 (464)
4 2b9e_A NOL1/NOP2/SUN domain fa 99.5 2.1E-14 7.3E-19 107.5 7.2 57 13-74 204-262 (309)
5 1ixk_A Methyltransferase; open 99.4 1.2E-13 4.3E-18 102.5 6.4 59 12-74 214-272 (315)
6 1sqg_A SUN protein, FMU protei 99.4 8E-14 2.7E-18 107.1 5.1 70 13-86 343-424 (429)
7 2frx_A Hypothetical protein YE 99.4 1.8E-13 6.2E-18 107.8 6.9 57 13-73 215-273 (479)
8 2yxl_A PH0851 protein, 450AA l 99.4 2.7E-13 9.2E-18 105.1 4.0 59 13-75 358-417 (450)
9 3ajd_A Putative methyltransfer 99.4 5.1E-13 1.7E-17 96.9 4.6 60 12-75 179-239 (274)
10 3id6_C Fibrillarin-like rRNA/T 97.5 5E-05 1.7E-09 54.7 2.8 41 34-74 167-213 (232)
11 4dmg_A Putative uncharacterize 96.8 0.00064 2.2E-08 52.1 2.8 55 15-73 297-355 (393)
12 1wxx_A TT1595, hypothetical pr 96.2 0.004 1.4E-07 46.7 4.1 52 18-73 299-354 (382)
13 2as0_A Hypothetical protein PH 95.9 0.0086 2.9E-07 44.9 4.3 44 30-73 317-364 (396)
14 3dou_A Ribosomal RNA large sub 95.6 0.0046 1.6E-07 42.2 1.7 48 23-73 114-163 (191)
15 1inl_A Spermidine synthase; be 95.6 0.0048 1.6E-07 45.0 1.9 56 29-84 186-247 (296)
16 3njr_A Precorrin-6Y methylase; 95.3 0.017 5.7E-07 39.5 3.9 42 30-74 136-177 (204)
17 3c0k_A UPF0064 protein YCCW; P 95.3 0.009 3.1E-07 44.9 2.6 43 31-73 322-368 (396)
18 2bm8_A Cephalosporin hydroxyla 94.7 0.03 1E-06 39.2 3.9 58 30-87 168-232 (236)
19 2qm3_A Predicted methyltransfe 94.6 0.082 2.8E-06 39.4 6.3 44 28-73 257-305 (373)
20 3tfw_A Putative O-methyltransf 94.4 0.056 1.9E-06 37.8 4.8 58 30-87 152-223 (248)
21 3hm2_A Precorrin-6Y C5,15-meth 94.4 0.035 1.2E-06 35.8 3.4 41 30-73 109-149 (178)
22 3evz_A Methyltransferase; NYSG 94.2 0.031 1E-06 37.9 2.9 46 27-74 158-203 (230)
23 3e05_A Precorrin-6Y C5,15-meth 94.2 0.06 2.1E-06 35.9 4.4 38 29-69 123-160 (204)
24 3duw_A OMT, O-methyltransferas 93.9 0.052 1.8E-06 36.6 3.5 58 29-86 148-219 (223)
25 2frn_A Hypothetical protein PH 93.9 0.022 7.5E-07 40.8 1.7 43 31-73 208-253 (278)
26 3v97_A Ribosomal RNA large sub 93.4 0.1 3.5E-06 42.6 5.1 47 21-75 634-680 (703)
27 2b3t_A Protein methyltransfera 93.4 0.024 8.2E-07 40.1 1.2 55 27-85 217-272 (276)
28 2b78_A Hypothetical protein SM 93.3 0.085 2.9E-06 39.7 4.2 44 30-73 313-358 (385)
29 3tma_A Methyltransferase; thum 93.3 0.18 6E-06 37.0 5.8 39 28-73 297-335 (354)
30 4dzr_A Protein-(glutamine-N5) 93.0 0.11 3.6E-06 34.1 3.9 43 27-72 143-187 (215)
31 3jwh_A HEN1; methyltransferase 92.7 0.24 8.1E-06 33.1 5.3 47 29-75 122-190 (217)
32 2a14_A Indolethylamine N-methy 92.6 0.11 3.9E-06 36.3 3.8 47 28-74 177-235 (263)
33 3h2b_A SAM-dependent methyltra 92.6 0.13 4.4E-06 34.0 3.8 46 29-74 122-179 (203)
34 3e23_A Uncharacterized protein 92.4 0.075 2.6E-06 35.4 2.5 46 29-74 122-179 (211)
35 1l3i_A Precorrin-6Y methyltran 92.1 0.071 2.4E-06 34.3 2.0 39 28-69 114-152 (192)
36 2zfu_A Nucleomethylin, cerebra 91.9 0.12 4E-06 34.5 3.0 44 30-74 133-176 (215)
37 3dh0_A SAM dependent methyltra 91.8 0.18 6E-06 33.6 3.8 45 30-74 125-178 (219)
38 3lpm_A Putative methyltransfer 91.8 0.07 2.4E-06 37.3 1.8 42 27-72 155-196 (259)
39 1i1n_A Protein-L-isoaspartate 91.7 0.033 1.1E-06 37.7 0.0 29 32-60 166-194 (226)
40 3lcc_A Putative methyl chlorid 91.7 0.19 6.5E-06 34.0 3.9 45 30-74 153-204 (235)
41 1yb2_A Hypothetical protein TA 91.6 0.044 1.5E-06 38.8 0.6 40 30-72 193-232 (275)
42 3pfg_A N-methyltransferase; N, 91.5 0.3 1E-05 33.6 4.9 29 57-85 217-245 (263)
43 2plw_A Ribosomal RNA methyltra 91.5 0.19 6.6E-06 33.0 3.7 40 25-67 131-170 (201)
44 1xdz_A Methyltransferase GIDB; 91.5 0.19 6.4E-06 34.6 3.7 44 29-73 155-198 (240)
45 3bxo_A N,N-dimethyltransferase 91.4 0.27 9.3E-06 32.9 4.5 23 29-51 122-144 (239)
46 3vc1_A Geranyl diphosphate 2-C 91.4 0.12 4.1E-06 37.0 2.8 46 29-74 202-266 (312)
47 3hnr_A Probable methyltransfer 91.4 0.37 1.3E-05 32.0 5.1 45 30-74 127-198 (220)
48 3e8s_A Putative SAM dependent 91.4 0.23 8E-06 32.7 4.0 47 29-75 133-207 (227)
49 3c3y_A Pfomt, O-methyltransfer 91.4 0.16 5.4E-06 35.3 3.3 22 30-51 163-184 (237)
50 3jwg_A HEN1, methyltransferase 91.0 0.26 8.9E-06 32.9 4.0 22 29-50 122-143 (219)
51 3f4k_A Putative methyltransfer 90.9 0.15 5.2E-06 34.8 2.8 46 29-74 131-193 (257)
52 2nyu_A Putative ribosomal RNA 90.9 0.2 6.9E-06 32.7 3.3 27 25-51 122-148 (196)
53 2igt_A SAM dependent methyltra 90.4 0.46 1.6E-05 35.1 5.2 43 29-71 253-298 (332)
54 3kkz_A Uncharacterized protein 90.3 0.17 5.7E-06 35.1 2.6 46 29-74 131-193 (267)
55 3mti_A RRNA methylase; SAM-dep 90.1 0.27 9.4E-06 31.9 3.4 45 30-74 117-166 (185)
56 3sm3_A SAM-dependent methyltra 90.1 0.3 1E-05 32.4 3.7 22 30-51 123-144 (235)
57 2i62_A Nicotinamide N-methyltr 90.1 0.27 9.4E-06 33.4 3.6 47 28-74 178-236 (265)
58 1pjz_A Thiopurine S-methyltran 90.1 0.35 1.2E-05 32.6 4.0 45 29-74 121-173 (203)
59 1dus_A MJ0882; hypothetical pr 90.1 0.11 3.9E-06 33.3 1.5 52 29-88 138-191 (194)
60 3cgg_A SAM-dependent methyltra 89.9 0.37 1.3E-05 30.9 3.9 45 29-74 128-172 (195)
61 3kr9_A SAM-dependent methyltra 89.9 0.93 3.2E-05 32.2 6.3 45 25-74 96-140 (225)
62 1kpg_A CFA synthase;, cyclopro 89.8 0.42 1.4E-05 33.3 4.4 23 29-51 149-171 (287)
63 3dli_A Methyltransferase; PSI- 89.6 0.68 2.3E-05 31.4 5.2 46 29-74 121-181 (240)
64 3hem_A Cyclopropane-fatty-acyl 89.5 0.54 1.8E-05 33.2 4.8 25 29-53 164-188 (302)
65 3tos_A CALS11; methyltransfera 89.3 0.22 7.7E-06 36.3 2.7 58 29-88 198-257 (257)
66 3u81_A Catechol O-methyltransf 89.0 0.73 2.5E-05 31.1 5.0 51 30-84 153-208 (221)
67 3grz_A L11 mtase, ribosomal pr 88.8 0.18 6.3E-06 33.4 1.8 44 28-74 139-182 (205)
68 3ou2_A SAM-dependent methyltra 88.8 0.44 1.5E-05 31.3 3.7 23 29-51 127-149 (218)
69 2nxc_A L11 mtase, ribosomal pr 88.7 0.45 1.5E-05 33.3 3.9 44 28-74 198-241 (254)
70 3g2m_A PCZA361.24; SAM-depende 88.6 0.28 9.5E-06 34.7 2.7 24 29-52 171-194 (299)
71 1xtp_A LMAJ004091AAA; SGPP, st 88.5 0.24 8.3E-06 33.6 2.3 46 29-74 178-235 (254)
72 1ri5_A MRNA capping enzyme; me 88.3 0.24 8.3E-06 34.3 2.2 22 29-50 155-176 (298)
73 3r3h_A O-methyltransferase, SA 88.3 0.45 1.5E-05 33.2 3.6 54 30-86 152-217 (242)
74 3g89_A Ribosomal RNA small sub 88.2 0.17 5.9E-06 35.7 1.5 44 29-73 165-208 (249)
75 3g5l_A Putative S-adenosylmeth 87.7 0.68 2.3E-05 31.5 4.2 22 29-50 126-147 (253)
76 2fk8_A Methoxy mycolic acid sy 87.4 0.62 2.1E-05 33.0 4.0 25 29-53 175-199 (318)
77 2ex4_A Adrenal gland protein A 87.3 0.35 1.2E-05 32.9 2.5 46 29-74 166-222 (241)
78 1sui_A Caffeoyl-COA O-methyltr 87.2 0.46 1.6E-05 33.3 3.2 20 29-48 171-190 (247)
79 3l8d_A Methyltransferase; stru 86.8 0.54 1.9E-05 31.5 3.2 45 30-74 135-197 (242)
80 3i9f_A Putative type 11 methyl 86.7 0.57 1.9E-05 29.9 3.2 43 30-74 94-145 (170)
81 2p7i_A Hypothetical protein; p 86.6 0.77 2.6E-05 30.5 3.9 46 29-74 121-196 (250)
82 3ujc_A Phosphoethanolamine N-m 86.5 0.47 1.6E-05 32.1 2.8 46 29-74 140-203 (266)
83 3dtn_A Putative methyltransfer 86.3 0.6 2.1E-05 31.3 3.3 23 30-52 130-152 (234)
84 2g72_A Phenylethanolamine N-me 86.3 0.6 2E-05 32.7 3.3 47 28-74 195-253 (289)
85 1yzh_A TRNA (guanine-N(7)-)-me 86.1 1 3.5E-05 30.1 4.3 42 30-74 138-179 (214)
86 3axs_A Probable N(2),N(2)-dime 86.0 0.08 2.7E-06 40.7 -1.5 23 31-54 141-163 (392)
87 3orh_A Guanidinoacetate N-meth 85.5 0.18 6.3E-06 34.9 0.3 20 29-48 151-170 (236)
88 1o9g_A RRNA methyltransferase; 85.4 0.91 3.1E-05 31.2 3.9 25 27-51 193-217 (250)
89 2dul_A N(2),N(2)-dimethylguano 85.3 0.09 3.1E-06 39.9 -1.5 22 31-53 147-168 (378)
90 1vlm_A SAM-dependent methyltra 85.2 0.86 2.9E-05 30.5 3.6 45 30-74 121-185 (219)
91 1ej0_A FTSJ; methyltransferase 84.3 0.43 1.5E-05 29.8 1.6 36 28-66 116-151 (180)
92 2xyq_A Putative 2'-O-methyl tr 84.0 0.36 1.2E-05 35.5 1.4 42 26-70 149-190 (290)
93 3c3p_A Methyltransferase; NP_9 84.0 0.27 9.3E-06 32.8 0.6 54 29-85 141-205 (210)
94 1nkv_A Hypothetical protein YJ 84.0 0.44 1.5E-05 32.4 1.7 22 29-50 121-142 (256)
95 3mq2_A 16S rRNA methyltransfer 83.6 0.83 2.8E-05 30.4 2.9 47 28-74 120-181 (218)
96 2pxx_A Uncharacterized protein 83.6 0.39 1.3E-05 31.4 1.2 23 29-51 140-162 (215)
97 2vdw_A Vaccinia virus capping 83.3 0.33 1.1E-05 35.3 0.8 22 29-50 150-171 (302)
98 1nt2_A Fibrillarin-like PRE-rR 83.2 0.51 1.7E-05 32.2 1.8 18 31-48 144-161 (210)
99 2gpy_A O-methyltransferase; st 83.2 0.44 1.5E-05 32.3 1.4 23 29-51 141-163 (233)
100 1y8c_A S-adenosylmethionine-de 83.1 0.61 2.1E-05 31.1 2.1 21 29-49 123-143 (246)
101 3dp7_A SAM-dependent methyltra 82.7 4.1 0.00014 29.8 6.6 46 30-75 269-340 (363)
102 3lec_A NADB-rossmann superfami 82.6 3.3 0.00011 29.5 5.9 45 25-74 102-146 (230)
103 4htf_A S-adenosylmethionine-de 82.5 1.3 4.4E-05 30.8 3.7 45 30-74 155-229 (285)
104 3ofk_A Nodulation protein S; N 82.5 0.51 1.7E-05 31.3 1.5 37 29-65 135-177 (216)
105 3eey_A Putative rRNA methylase 82.5 0.69 2.4E-05 30.2 2.1 44 30-73 121-169 (197)
106 3lst_A CALO1 methyltransferase 82.2 2.7 9.4E-05 30.4 5.5 46 30-75 268-334 (348)
107 1xxl_A YCGJ protein; structura 82.2 1.2 4.1E-05 30.2 3.4 22 30-51 106-127 (239)
108 2kw5_A SLR1183 protein; struct 82.1 1.1 3.7E-05 29.3 3.0 24 29-52 112-135 (202)
109 3dr5_A Putative O-methyltransf 82.1 1 3.5E-05 31.0 3.0 22 30-51 145-166 (221)
110 2ift_A Putative methylase HI07 82.0 0.46 1.6E-05 31.9 1.1 18 35-52 150-167 (201)
111 2qfm_A Spermine synthase; sper 82.0 0.79 2.7E-05 35.1 2.6 47 25-71 291-339 (364)
112 2hlg_A Fruit-specific protein; 81.9 0.38 1.3E-05 25.9 0.6 13 40-53 27-39 (39)
113 3cbg_A O-methyltransferase; cy 81.7 0.71 2.4E-05 31.6 2.1 53 30-85 164-228 (232)
114 2p8j_A S-adenosylmethionine-de 81.5 0.39 1.3E-05 31.5 0.6 24 29-52 109-132 (209)
115 3ntv_A MW1564 protein; rossman 81.4 1.3 4.6E-05 30.2 3.4 20 30-49 158-177 (232)
116 3bus_A REBM, methyltransferase 81.2 1.4 4.8E-05 30.2 3.4 22 29-50 147-168 (273)
117 1mjf_A Spermidine synthase; sp 81.2 0.82 2.8E-05 32.6 2.3 23 30-52 175-197 (281)
118 2fca_A TRNA (guanine-N(7)-)-me 80.9 0.88 3E-05 30.8 2.3 19 30-48 135-153 (213)
119 2o57_A Putative sarcosine dime 80.9 1 3.5E-05 31.4 2.7 22 29-50 168-189 (297)
120 3ocj_A Putative exported prote 80.8 1.9 6.5E-05 30.5 4.1 46 30-75 209-289 (305)
121 2yx1_A Hypothetical protein MJ 80.5 0.32 1.1E-05 35.7 -0.1 22 31-52 274-295 (336)
122 3p9n_A Possible methyltransfer 79.8 2.1 7.1E-05 27.9 3.8 26 28-53 131-158 (189)
123 2pwy_A TRNA (adenine-N(1)-)-me 79.3 0.69 2.4E-05 31.4 1.3 22 30-51 180-201 (258)
124 1zx0_A Guanidinoacetate N-meth 78.6 0.35 1.2E-05 33.0 -0.4 23 28-50 150-172 (236)
125 1o54_A SAM-dependent O-methylt 78.6 0.67 2.3E-05 32.4 1.1 22 30-51 195-216 (277)
126 3thr_A Glycine N-methyltransfe 78.2 0.8 2.7E-05 31.8 1.4 22 29-50 156-177 (293)
127 3i53_A O-methyltransferase; CO 77.9 4.9 0.00017 28.6 5.6 44 31-74 257-318 (332)
128 3cc8_A Putative methyltransfer 77.8 2.1 7.2E-05 28.0 3.3 22 29-50 111-132 (230)
129 2pt6_A Spermidine synthase; tr 77.6 1.2 4.2E-05 32.6 2.3 39 29-67 211-251 (321)
130 2p41_A Type II methyltransfera 77.1 3.8 0.00013 29.8 4.8 18 30-47 173-190 (305)
131 3hp7_A Hemolysin, putative; st 77.1 3 0.0001 30.6 4.3 21 28-48 165-185 (291)
132 2yxd_A Probable cobalt-precorr 76.7 6 0.0002 24.8 5.2 39 30-73 115-153 (183)
133 2fhp_A Methylase, putative; al 76.2 0.83 2.8E-05 29.3 1.0 20 35-54 141-160 (187)
134 2i7c_A Spermidine synthase; tr 76.1 1.5 5E-05 31.4 2.3 24 29-52 173-196 (283)
135 3ckk_A TRNA (guanine-N(7)-)-me 76.1 0.81 2.8E-05 31.9 0.9 22 29-50 149-170 (235)
136 2r3s_A Uncharacterized protein 75.9 3.5 0.00012 29.1 4.3 45 30-74 253-320 (335)
137 2p35_A Trans-aconitate 2-methy 75.8 1.7 5.8E-05 29.3 2.5 22 29-50 113-134 (259)
138 3bt7_A TRNA (uracil-5-)-methyl 75.7 1.3 4.3E-05 32.9 1.9 16 37-52 315-330 (369)
139 3d2l_A SAM-dependent methyltra 75.5 0.83 2.8E-05 30.5 0.8 22 29-50 118-139 (243)
140 3bkw_A MLL3908 protein, S-aden 74.7 0.95 3.3E-05 30.2 1.0 19 30-48 126-144 (243)
141 1qzz_A RDMB, aclacinomycin-10- 74.5 3.1 0.0001 30.0 3.7 44 30-74 269-336 (374)
142 1jsx_A Glucose-inhibited divis 74.4 1.2 4E-05 29.3 1.3 39 29-73 146-184 (207)
143 2gs9_A Hypothetical protein TT 74.4 0.98 3.4E-05 29.7 1.0 22 30-51 114-135 (211)
144 2aot_A HMT, histamine N-methyl 74.3 1 3.4E-05 31.7 1.0 22 29-50 153-174 (292)
145 3gwz_A MMCR; methyltransferase 74.2 7.8 0.00027 28.3 5.9 45 30-74 289-353 (369)
146 3u7q_A Nitrogenase molybdenum- 74.2 3.1 0.00011 32.6 3.9 48 27-74 131-181 (492)
147 3tka_A Ribosomal RNA small sub 74.1 1.9 6.6E-05 33.0 2.6 51 14-67 240-290 (347)
148 2esr_A Methyltransferase; stru 74.1 1.3 4.3E-05 28.4 1.4 19 35-53 125-143 (177)
149 4hg2_A Methyltransferase type 74.0 1 3.5E-05 32.0 1.0 25 30-54 117-141 (257)
150 3dxy_A TRNA (guanine-N(7)-)-me 73.8 0.95 3.2E-05 31.1 0.8 21 30-50 132-152 (218)
151 2ip2_A Probable phenazine-spec 73.4 8.7 0.0003 27.2 5.9 45 30-74 254-319 (334)
152 1mio_B Nitrogenase molybdenum 73.2 3.3 0.00011 31.8 3.8 48 28-75 85-138 (458)
153 3q87_B N6 adenine specific DNA 73.2 6.4 0.00022 25.4 4.8 32 40-74 115-146 (170)
154 2xdq_A Light-independent proto 73.1 1.3 4.5E-05 33.8 1.5 48 28-75 86-135 (460)
155 4fsd_A Arsenic methyltransfera 73.0 1.5 5E-05 32.5 1.7 20 30-49 185-204 (383)
156 3gnl_A Uncharacterized protein 73.0 7.4 0.00025 27.9 5.4 44 25-73 102-145 (244)
157 3dlc_A Putative S-adenosyl-L-m 72.8 2 6.7E-05 28.0 2.1 19 30-48 130-148 (219)
158 2ld4_A Anamorsin; methyltransf 72.8 1.1 3.6E-05 28.9 0.8 40 30-69 83-128 (176)
159 2pjd_A Ribosomal RNA small sub 72.4 1.5 5E-05 32.0 1.6 28 27-54 282-309 (343)
160 1wg8_A Predicted S-adenosylmet 72.3 1.8 6.3E-05 32.2 2.1 55 15-72 200-254 (285)
161 1ve3_A Hypothetical protein PH 72.3 1.1 3.8E-05 29.6 0.8 21 30-50 124-144 (227)
162 1x19_A CRTF-related protein; m 72.0 5.1 0.00018 28.9 4.4 22 29-50 276-297 (359)
163 3m33_A Uncharacterized protein 71.8 0.44 1.5E-05 32.3 -1.3 40 30-73 124-163 (226)
164 3dmg_A Probable ribosomal RNA 71.3 1.6 5.5E-05 32.8 1.6 27 29-55 321-347 (381)
165 4df3_A Fibrillarin-like rRNA/T 71.2 1.7 5.9E-05 30.9 1.7 19 30-48 164-182 (233)
166 1m6y_A S-adenosyl-methyltransf 71.0 2.9 9.9E-05 30.6 2.9 50 14-66 211-260 (301)
167 2xvm_A Tellurite resistance pr 70.9 1.5 5E-05 28.3 1.1 20 29-48 117-136 (199)
168 1fbn_A MJ fibrillarin homologu 70.8 1.3 4.5E-05 30.0 0.9 18 30-47 160-177 (230)
169 4e2x_A TCAB9; kijanose, tetron 70.7 4 0.00014 30.1 3.6 46 29-74 189-250 (416)
170 3ggd_A SAM-dependent methyltra 70.6 2.6 8.8E-05 28.4 2.4 22 30-51 145-166 (245)
171 2qy6_A UPF0209 protein YFCK; s 70.6 3 0.0001 29.8 2.8 38 31-75 196-233 (257)
172 2vdv_E TRNA (guanine-N(7)-)-me 69.3 1.4 4.7E-05 30.3 0.8 19 30-48 155-173 (246)
173 2qe6_A Uncharacterized protein 68.8 3.9 0.00013 29.0 3.1 22 30-51 178-199 (274)
174 3bwc_A Spermidine synthase; SA 68.8 4.5 0.00015 29.1 3.5 41 29-69 191-232 (304)
175 1ws6_A Methyltransferase; stru 68.5 1.7 5.9E-05 27.2 1.1 21 35-55 134-154 (171)
176 1tw3_A COMT, carminomycin 4-O- 68.5 5.6 0.00019 28.5 4.0 45 30-74 270-336 (360)
177 2ozv_A Hypothetical protein AT 68.4 2.2 7.5E-05 29.8 1.7 22 27-48 149-170 (260)
178 2hnk_A SAM-dependent O-methylt 68.3 1.7 5.9E-05 29.5 1.1 23 29-51 162-184 (239)
179 3adn_A Spermidine synthase; am 68.2 2.9 9.8E-05 30.3 2.3 24 29-52 179-202 (294)
180 3p2e_A 16S rRNA methylase; met 68.2 1.7 6E-05 29.9 1.1 20 29-48 120-139 (225)
181 3bgv_A MRNA CAP guanine-N7 met 68.1 1.8 6.1E-05 30.7 1.2 22 29-50 136-157 (313)
182 3pdi_A Nitrogenase MOFE cofact 67.8 2.8 9.5E-05 32.7 2.3 46 29-74 112-159 (483)
183 2yvl_A TRMI protein, hypotheti 67.8 3.8 0.00013 27.4 2.8 22 30-51 172-193 (248)
184 2avn_A Ubiquinone/menaquinone 67.5 1.4 4.9E-05 30.2 0.6 23 29-51 133-155 (260)
185 2ih2_A Modification methylase 67.5 2.4 8.1E-05 31.1 1.8 36 30-65 146-183 (421)
186 3tr6_A O-methyltransferase; ce 67.5 1.9 6.3E-05 28.7 1.1 22 30-51 156-177 (225)
187 2xdq_B Light-independent proto 67.3 3.9 0.00013 31.9 3.1 45 31-75 80-126 (511)
188 2gb4_A Thiopurine S-methyltran 66.9 1.8 6.1E-05 30.5 1.0 45 29-74 172-224 (252)
189 1iy9_A Spermidine synthase; ro 66.6 3.3 0.00011 29.4 2.3 22 30-51 171-192 (275)
190 3bzb_A Uncharacterized protein 66.5 6 0.00021 27.8 3.7 45 29-74 181-234 (281)
191 2fpo_A Methylase YHHF; structu 64.4 1.9 6.5E-05 28.8 0.7 18 36-53 148-165 (202)
192 4gek_A TRNA (CMO5U34)-methyltr 64.1 2 6.7E-05 30.4 0.8 20 31-50 161-180 (261)
193 2cmg_A Spermidine synthase; tr 64.1 4.2 0.00014 28.9 2.5 23 30-52 153-175 (262)
194 3g07_A 7SK snRNA methylphospha 63.4 2.6 8.7E-05 29.9 1.2 23 27-49 199-221 (292)
195 1mio_A Nitrogenase molybdenum 63.3 3.5 0.00012 32.7 2.1 49 27-75 122-172 (533)
196 3mcz_A O-methyltransferase; ad 62.8 9 0.00031 27.3 4.1 44 30-73 269-335 (352)
197 3ccf_A Cyclopropane-fatty-acyl 62.7 2.4 8.1E-05 29.4 1.0 22 30-51 136-157 (279)
198 3fpf_A Mtnas, putative unchara 62.6 5.4 0.00018 29.6 2.9 20 29-48 203-222 (298)
199 2f8l_A Hypothetical protein LM 62.6 3.4 0.00012 30.0 1.8 36 32-67 240-276 (344)
200 3g5t_A Trans-aconitate 3-methy 62.3 1.8 6.3E-05 30.3 0.3 21 30-50 131-151 (299)
201 3k6r_A Putative transferase PH 62.3 5 0.00017 29.1 2.7 38 34-71 211-251 (278)
202 1vl5_A Unknown conserved prote 61.7 2.5 8.7E-05 28.7 1.0 20 30-49 122-141 (260)
203 1wzn_A SAM-dependent methyltra 61.2 2.6 9E-05 28.4 1.0 20 29-48 126-145 (252)
204 3m70_A Tellurite resistance pr 60.7 3 0.0001 28.9 1.1 19 29-47 204-222 (286)
205 1i9g_A Hypothetical protein RV 60.6 1.8 6.2E-05 29.9 0.0 22 30-51 185-206 (280)
206 3opn_A Putative hemolysin; str 59.8 3.8 0.00013 28.5 1.6 20 29-48 118-137 (232)
207 2hwk_A Helicase NSP2; rossman 59.5 6.3 0.00021 30.0 2.8 46 30-75 236-282 (320)
208 2avd_A Catechol-O-methyltransf 59.4 3.2 0.00011 27.6 1.1 21 30-50 161-181 (229)
209 2fyt_A Protein arginine N-meth 59.4 1.4 4.8E-05 32.3 -0.8 24 28-51 151-174 (340)
210 3aek_B Light-independent proto 58.9 6.2 0.00021 31.0 2.8 46 27-74 73-120 (525)
211 1uir_A Polyamine aminopropyltr 58.7 2.7 9.1E-05 30.5 0.7 23 29-51 176-198 (314)
212 1wy7_A Hypothetical protein PH 57.3 9.3 0.00032 24.8 3.1 29 44-73 143-171 (207)
213 3aek_A Light-independent proto 57.0 9.4 0.00032 29.1 3.5 46 29-75 104-155 (437)
214 1g6q_1 HnRNP arginine N-methyl 56.9 1.5 5.1E-05 31.9 -1.0 23 29-51 126-148 (328)
215 3q7e_A Protein arginine N-meth 56.7 1.5 5.2E-05 32.2 -1.0 25 29-53 154-178 (349)
216 3gu3_A Methyltransferase; alph 56.4 4 0.00014 28.4 1.2 21 30-50 108-128 (284)
217 1g2y_A Hepatocyte nuclear fact 55.9 11 0.00037 19.4 2.5 16 17-32 3-18 (32)
218 3b5i_A S-adenosyl-L-methionine 55.3 6 0.0002 30.0 2.1 31 20-51 198-228 (374)
219 3reo_A (ISO)eugenol O-methyltr 54.8 12 0.00043 27.3 3.8 22 30-51 282-303 (368)
220 3r0q_C Probable protein argini 54.8 1.4 4.8E-05 32.7 -1.4 24 29-52 150-173 (376)
221 2b2c_A Spermidine synthase; be 54.5 6 0.0002 28.9 2.0 25 28-52 202-226 (314)
222 2yqz_A Hypothetical protein TT 54.2 4.1 0.00014 27.4 0.9 18 30-47 123-140 (263)
223 3a27_A TYW2, uncharacterized p 54.1 1.4 5E-05 31.1 -1.4 24 31-55 202-225 (272)
224 2wk1_A NOVP; transferase, O-me 53.9 6.5 0.00022 28.7 2.1 41 29-70 225-265 (282)
225 2o07_A Spermidine synthase; st 53.7 6 0.0002 28.6 1.8 23 30-52 191-213 (304)
226 3mgg_A Methyltransferase; NYSG 53.6 4.2 0.00014 27.8 1.0 19 30-48 124-142 (276)
227 1boo_A Protein (N-4 cytosine-s 53.5 16 0.00054 26.5 4.1 48 26-73 62-116 (323)
228 3giw_A Protein of unknown func 52.0 12 0.0004 27.5 3.2 22 30-51 182-203 (277)
229 1g8a_A Fibrillarin-like PRE-rR 51.3 3.8 0.00013 27.3 0.4 18 31-48 161-178 (227)
230 3pdi_B Nitrogenase MOFE cofact 50.3 10 0.00035 29.3 2.7 48 27-74 80-133 (458)
231 3mb5_A SAM-dependent methyltra 49.5 3 0.0001 28.3 -0.3 19 30-48 176-194 (255)
232 3p9c_A Caffeic acid O-methyltr 48.7 14 0.00046 27.1 3.1 22 30-51 280-301 (364)
233 1p91_A Ribosomal RNA large sub 48.5 4.2 0.00014 27.8 0.3 20 31-50 161-180 (269)
234 1xj5_A Spermidine synthase 1; 48.0 6.7 0.00023 28.9 1.3 25 29-53 216-240 (334)
235 3vyw_A MNMC2; tRNA wobble urid 46.9 15 0.00052 27.4 3.1 39 30-75 208-246 (308)
236 1vbf_A 231AA long hypothetical 46.9 5.7 0.00019 26.4 0.7 19 34-52 151-169 (231)
237 3ahp_A CUTA1; thermostable pro 46.8 15 0.00052 23.3 2.8 48 39-89 3-50 (108)
238 2ipx_A RRNA 2'-O-methyltransfe 46.8 5.8 0.0002 26.6 0.8 18 31-48 165-182 (233)
239 4dcm_A Ribosomal RNA large sub 46.3 6.6 0.00022 29.3 1.1 26 29-54 315-340 (375)
240 3uwp_A Histone-lysine N-methyl 45.9 14 0.00048 29.0 2.9 18 30-47 270-287 (438)
241 2wa2_A Non-structural protein 45.8 21 0.00071 25.5 3.7 21 30-50 173-195 (276)
242 3sso_A Methyltransferase; macr 45.5 7.3 0.00025 30.4 1.3 22 29-50 305-326 (419)
243 2y1w_A Histone-arginine methyl 45.3 3.3 0.00011 30.2 -0.7 23 30-52 137-159 (348)
244 3tm4_A TRNA (guanine N2-)-meth 45.3 34 0.0011 25.1 4.8 36 30-73 313-348 (373)
245 3evf_A RNA-directed RNA polyme 44.5 48 0.0016 24.4 5.5 44 31-74 166-211 (277)
246 3c0w_A Intron-encoded endonucl 44.4 9.7 0.00033 27.2 1.7 30 40-69 156-185 (235)
247 1zg3_A Isoflavanone 4'-O-methy 43.8 13 0.00044 26.8 2.3 22 30-51 272-296 (358)
248 3iv6_A Putative Zn-dependent a 43.6 14 0.00047 26.4 2.4 20 30-50 131-150 (261)
249 2q22_A Uncharacterized protein 43.5 21 0.00071 23.9 3.1 67 20-89 32-98 (139)
250 3ege_A Putative methyltransfer 43.0 15 0.00051 25.0 2.4 20 30-50 113-132 (261)
251 1qgu_B Protein (nitrogenase mo 42.7 11 0.00036 29.7 1.8 39 28-66 130-170 (519)
252 3u7q_B Nitrogenase molybdenum- 42.4 11 0.00037 29.8 1.8 40 28-67 132-173 (523)
253 1fp2_A Isoflavone O-methyltran 42.4 14 0.00049 26.5 2.4 22 30-51 267-291 (352)
254 4hc4_A Protein arginine N-meth 42.2 2.5 8.5E-05 32.1 -1.8 32 27-58 168-201 (376)
255 1g60_A Adenine-specific methyl 42.0 11 0.00037 26.3 1.6 25 26-50 52-76 (260)
256 1af7_A Chemotaxis receptor met 41.8 9 0.00031 27.5 1.2 20 28-47 232-251 (274)
257 1u2z_A Histone-lysine N-methyl 41.4 18 0.00061 27.9 2.9 18 30-47 341-358 (433)
258 3lbf_A Protein-L-isoaspartate 41.3 6.5 0.00022 25.7 0.3 17 34-50 160-176 (210)
259 1k7j_A Protein YCIO, protein T 40.6 10 0.00035 26.2 1.3 32 33-64 19-54 (206)
260 3ojo_A CAP5O; rossmann fold, c 40.6 62 0.0021 24.8 5.8 38 29-67 110-147 (431)
261 2b0j_A 5,10-methenyltetrahydro 39.5 28 0.00095 26.7 3.6 44 22-74 154-200 (358)
262 1m6e_X S-adenosyl-L-methionnin 39.4 22 0.00074 26.8 3.0 29 21-50 183-211 (359)
263 2rbg_A Putative uncharacterize 39.4 21 0.0007 23.6 2.5 24 39-67 86-109 (126)
264 2oxt_A Nucleoside-2'-O-methylt 39.0 13 0.00045 26.3 1.7 41 30-73 165-211 (265)
265 2efj_A 3,7-dimethylxanthine me 39.0 15 0.00052 28.0 2.1 32 20-52 198-229 (384)
266 3trk_A Nonstructural polyprote 37.9 20 0.00068 27.2 2.5 42 33-74 244-286 (324)
267 2yxe_A Protein-L-isoaspartate 37.7 8.7 0.0003 25.1 0.5 18 33-50 162-179 (215)
268 1hru_A YRDC gene product; prot 37.5 12 0.00042 25.3 1.3 33 32-64 11-47 (188)
269 2zig_A TTHA0409, putative modi 37.5 13 0.00045 26.4 1.5 23 27-49 76-98 (297)
270 1nv8_A HEMK protein; class I a 37.1 14 0.00049 26.1 1.6 31 31-65 231-262 (284)
271 4a6d_A Hydroxyindole O-methylt 37.0 34 0.0012 24.8 3.7 21 31-51 266-286 (353)
272 2zom_A CUTA1, protein CUTA, ch 36.5 14 0.00048 23.7 1.3 41 42-88 10-53 (113)
273 3eld_A Methyltransferase; flav 36.0 95 0.0032 23.1 6.0 44 31-74 173-218 (300)
274 2b25_A Hypothetical protein; s 35.9 12 0.00042 26.7 1.1 18 30-47 201-218 (336)
275 3g79_A NDP-N-acetyl-D-galactos 35.8 64 0.0022 25.1 5.3 35 29-64 128-162 (478)
276 1fp1_D Isoliquiritigenin 2'-O- 35.6 12 0.0004 27.3 0.9 19 30-48 288-306 (372)
277 1r18_A Protein-L-isoaspartate( 34.9 9.2 0.00032 25.5 0.3 19 32-50 178-196 (227)
278 2pbf_A Protein-L-isoaspartate 34.5 8.7 0.0003 25.4 0.1 17 32-48 177-193 (227)
279 2okc_A Type I restriction enzy 34.1 12 0.00043 28.1 0.9 44 23-70 286-332 (445)
280 1jcu_A Conserved protein MTH16 33.6 15 0.00051 25.5 1.2 33 33-65 18-54 (208)
281 4h1h_A LMO1638 protein; MCCF-l 33.5 77 0.0026 23.1 5.1 49 36-84 7-59 (327)
282 3r24_A NSP16, 2'-O-methyl tran 33.5 12 0.0004 28.7 0.7 45 26-73 195-240 (344)
283 4e5s_A MCCFLIKE protein (BA_56 33.4 99 0.0034 22.7 5.8 49 36-84 7-59 (331)
284 1owx_A Lupus LA protein, SS-B, 32.7 58 0.002 20.8 3.9 48 40-88 16-64 (121)
285 3gjy_A Spermidine synthase; AP 32.3 16 0.00056 27.0 1.3 44 30-73 182-227 (317)
286 1jg1_A PIMT;, protein-L-isoasp 32.1 11 0.00037 25.3 0.3 17 34-50 175-191 (235)
287 4a7p_A UDP-glucose dehydrogena 31.4 61 0.0021 24.9 4.4 38 28-66 109-146 (446)
288 1osc_A Similar to divalent cat 31.2 24 0.00083 23.0 1.9 42 41-88 22-66 (126)
289 2h1r_A Dimethyladenosine trans 31.1 6.9 0.00024 28.0 -0.9 22 32-53 143-164 (299)
290 3ttc_A HYPF, transcriptional r 30.7 33 0.0011 28.1 3.0 36 30-65 113-152 (657)
291 3o4f_A Spermidine synthase; am 29.8 48 0.0016 24.3 3.5 17 31-47 181-197 (294)
292 3sr3_A Microcin immunity prote 29.5 1E+02 0.0036 22.6 5.3 49 36-84 8-60 (336)
293 3bkx_A SAM-dependent methyltra 29.1 46 0.0016 22.3 3.1 18 35-52 146-163 (275)
294 3tla_A MCCF; serine protease, 29.0 1.1E+02 0.0036 23.1 5.4 49 36-84 38-90 (371)
295 2px2_A Genome polyprotein [con 28.8 35 0.0012 25.2 2.6 16 30-45 164-180 (269)
296 3o3m_B Beta subunit 2-hydroxya 28.3 47 0.0016 24.7 3.3 16 39-54 24-40 (385)
297 3cvo_A Methyltransferase-like 28.0 33 0.0011 23.7 2.2 32 32-65 138-169 (202)
298 1dl5_A Protein-L-isoaspartate 27.5 14 0.00048 26.3 0.2 16 35-50 162-177 (317)
299 3o3m_A Alpha subunit 2-hydroxy 27.4 32 0.0011 25.9 2.2 16 39-55 27-42 (408)
300 3jtx_A Aminotransferase; NP_28 26.4 1.2E+02 0.004 21.2 4.9 48 24-73 307-355 (396)
301 3mag_A VP39; methylated adenin 26.3 45 0.0015 25.1 2.8 35 19-53 35-73 (307)
302 1uku_A CUTA1, periplasmic diva 25.2 34 0.0012 21.4 1.7 39 43-88 2-43 (102)
303 1eg2_A Modification methylase 25.1 28 0.00096 25.4 1.5 23 27-50 85-107 (319)
304 1zq9_A Probable dimethyladenos 24.8 6.3 0.00022 28.0 -2.1 15 37-52 136-150 (285)
305 3c6k_A Spermine synthase; sper 24.8 34 0.0012 26.2 1.9 37 29-66 312-349 (381)
306 1p1l_A CUTA, periplasmic dival 24.7 27 0.00091 21.9 1.1 39 43-88 3-44 (102)
307 2eqa_A Hypothetical protein ST 24.1 29 0.001 26.2 1.4 33 33-65 19-55 (352)
308 4e21_A 6-phosphogluconate dehy 23.4 90 0.0031 23.0 4.0 45 29-75 96-140 (358)
309 3ipz_A Monothiol glutaredoxin- 22.5 89 0.003 18.6 3.3 32 38-74 15-55 (109)
310 3qgu_A LL-diaminopimelate amin 22.1 1.3E+02 0.0046 21.5 4.7 48 24-73 354-403 (449)
311 3vth_A Hydrogenase maturation 22.0 65 0.0022 26.8 3.2 35 31-65 205-243 (761)
312 2yjg_A Lactate racemase apopro 27.6 19 0.00065 27.9 0.0 23 29-51 298-321 (436)
313 4dq6_A Putative pyridoxal phos 21.3 2.1E+02 0.0071 19.7 5.6 53 21-73 300-356 (391)
314 2h00_A Methyltransferase 10 do 21.3 68 0.0023 21.4 2.7 42 26-70 190-231 (254)
315 3gg2_A Sugar dehydrogenase, UD 21.0 1E+02 0.0035 23.4 3.9 37 28-65 102-138 (450)
316 2o1k_A NS28, non-structural gl 20.7 56 0.0019 18.4 1.8 23 20-44 26-48 (52)
317 1j93_A UROD, uroporphyrinogen 20.6 1.1E+02 0.0039 21.9 4.0 27 39-65 320-346 (353)
318 3l8a_A METC, putative aminotra 20.0 2.2E+02 0.0075 20.2 5.4 52 22-73 331-385 (421)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.69 E-value=1.4e-17 Score=127.97 Aligned_cols=53 Identities=25% Similarity=0.318 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC
Q psy7378 11 LALRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR 67 (90)
Q Consensus 11 ~~~~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~ 67 (90)
.+.+++..|+.+|++||.+|+ ++|||||+|||||||++|+|||+||++||+++
T Consensus 251 ~~~~~~~~l~~lQ~~iL~~a~----~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 251 SRKKERQILPVLQVQLLAAGL----LATKPGGHVVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp GGHHHHHTHHHHHHHHHHHHH----HTEEEEEEEEEEESCCCTTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH----hcCCCCcEEEEEeCCCchhhCHHHHHHHHHhC
Confidence 455788999999999887765 56799999999999999999999999999865
No 2
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.56 E-value=3.6e-15 Score=117.43 Aligned_cols=57 Identities=25% Similarity=0.373 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 14 RALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 14 ~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+++..++.+|++||.+| +++|||||+|||||||++++|||++|++|+++++++++++
T Consensus 204 ~~~~~l~~~Q~~iL~~a----~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 204 ESPLYCQKRQQEILSSA----IKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp THHHHHHHHHHHHHHHH----HHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred HHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCEEEec
Confidence 56788899998887665 4667999999999999999999999999999988888775
No 3
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.52 E-value=9.4e-15 Score=115.32 Aligned_cols=59 Identities=32% Similarity=0.475 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeecC
Q psy7378 13 LRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTG 75 (90)
Q Consensus 13 ~~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~~ 75 (90)
.+++..++.+|+++|.+| +++|||||+|||||||+.++|||++|++|++++ +++++++.
T Consensus 198 ~~~~~~l~~~Q~~iL~~a----~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~~~~l~~~~ 257 (464)
T 3m6w_A 198 PSAPKRMAEVQKALLAQA----SRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDAR 257 (464)
T ss_dssp TTHHHHHHHHHHHHHHHH----HTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCCCcEEEecc
Confidence 367888899998877654 567899999999999999999999999999998 78887753
No 4
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.52 E-value=2.1e-14 Score=107.51 Aligned_cols=57 Identities=33% Similarity=0.422 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-C-cEEeec
Q psy7378 13 LRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-D-VKLVPT 74 (90)
Q Consensus 13 ~~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~-~~l~~~ 74 (90)
.+++..++.+|++||.+|+ ++++ ||+|||||||++++|||++|++||+++ + ++++++
T Consensus 204 ~~~~~~l~~~Q~~iL~~a~----~~l~-gG~lvYsTCs~~~~Ene~~v~~~l~~~~~~~~~~~~ 262 (309)
T 2b9e_A 204 PVRLHALAGFQQRALCHAL----TFPS-LQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPA 262 (309)
T ss_dssp -CCHHHHHHHHHHHHHHHT----TCTT-CCEEEEEESCCCGGGTHHHHHHHHTTSTTTEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHH----hccC-CCEEEEECCCCChHHhHHHHHHHHHhCCCcEEEecc
Confidence 3567889999999876654 5566 999999999999999999999999988 6 888765
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.44 E-value=1.2e-13 Score=102.52 Aligned_cols=59 Identities=36% Similarity=0.586 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 12 ALRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 12 ~~~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+.+++..+..+|.++|.++. ++|||||++||||||++++|||.+|++++++++++++++
T Consensus 214 ~~~~~~~~~~~q~~~L~~~~----~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 214 TMDDIKFCQGLQMRLLEKGL----EVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp CHHHHHHHHHHHHHHHHHHH----HHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHH----HhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEEecC
Confidence 34778889999998877665 556999999999999999999999999999888877664
No 6
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.43 E-value=8e-14 Score=107.15 Aligned_cols=70 Identities=29% Similarity=0.418 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEee-----------cCCCCCC
Q psy7378 13 LRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVP-----------TGLDFGT 80 (90)
Q Consensus 13 ~~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~-----------~~~~~g~ 80 (90)
.+++..++.+|.++|.+ ++++|||||+|||||||++++|||.+|.++++++ ++++++ .|...++
T Consensus 343 ~~~~~~l~~~q~~~L~~----a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 418 (429)
T 1sqg_A 343 DRDIPELAQLQSEILDA----IWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEG 418 (429)
T ss_dssp TTHHHHHHHHHHHHHHH----HGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEECSSBCSSSBSEEECCCTTSC
T ss_pred HHHHHHHHHHHHHHHHH----HHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEEeCCCCCCCCeEEECCCCCCC
Confidence 35688889999887765 4577899999999999999999999999999988 788765 1223478
Q ss_pred CCcccc
Q psy7378 81 EGFVNY 86 (90)
Q Consensus 81 dGf~~~ 86 (90)
||||..
T Consensus 419 dGff~a 424 (429)
T 1sqg_A 419 DGFFYA 424 (429)
T ss_dssp CSEEEE
T ss_pred CceEEE
Confidence 999864
No 7
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.43 E-value=1.8e-13 Score=107.82 Aligned_cols=57 Identities=35% Similarity=0.454 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-Cc-EEee
Q psy7378 13 LRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DV-KLVP 73 (90)
Q Consensus 13 ~~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~-~l~~ 73 (90)
.+++..++.+|+++|.+|. ++|||||+|||||||++++|||++|+++++++ ++ ++++
T Consensus 215 ~~~~~~l~~~q~~iL~~a~----~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~~~~~~~ 273 (479)
T 2frx_A 215 PESNQEIAATQRELIDSAF----HALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLP 273 (479)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTTTEEECC
T ss_pred HhHHHHHHHHHHHHHHHHH----HhcCCCCEEEEecccCCcccCHHHHHHHHHHCCCceeccc
Confidence 4678899999998877665 55799999999999999999999999999988 54 5543
No 8
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.36 E-value=2.7e-13 Score=105.06 Aligned_cols=59 Identities=31% Similarity=0.483 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeecC
Q psy7378 13 LRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTG 75 (90)
Q Consensus 13 ~~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~~ 75 (90)
.+++..++.+|.++|.++ +++|||||+|||+|||++++|||++|+++++++ +++++++.
T Consensus 358 ~~~~~~l~~~q~~iL~~a----~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~~~ 417 (450)
T 2yxl_A 358 EDKINEMSQLQRELLESA----ARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPLK 417 (450)
T ss_dssp TTSHHHHHHHHHHHHHHH----HTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECCCC
T ss_pred HHHHHHHHHHHHHHHHHH----HHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEeecc
Confidence 356778888898876654 577899999999999999999999999999988 78887753
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.35 E-value=5.1e-13 Score=96.93 Aligned_cols=60 Identities=37% Similarity=0.447 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeecC
Q psy7378 12 ALRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTG 75 (90)
Q Consensus 12 ~~~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~~ 75 (90)
+.+++..+...|.++|.++. ++|||||++||+|||++++|||++|+++++++ +++++++.
T Consensus 179 ~~~~~~~~~~~~~~~l~~~~----~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~~~~~~~~ 239 (274)
T 3ajd_A 179 SEEDIKYCSLRQKELIDIGI----DLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVELIIIK 239 (274)
T ss_dssp -HHHHTGGGTCHHHHHHHHH----HHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSSEEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHH----HhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCCcEEecCc
Confidence 44667777788888776655 55799999999999999999999999999887 79988764
No 10
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.49 E-value=5e-05 Score=54.71 Aligned_cols=41 Identities=10% Similarity=0.029 Sum_probs=31.9
Q ss_pred HhhcCCCCCEEEEE---cC---CCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 34 LNARSPTGGYLVYS---TC---SILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 34 ~~~~lkpgG~lvYs---TC---S~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+.++|||||+++++ +| ++.++||.+.+.++|++++|++...
T Consensus 167 ~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~ 213 (232)
T 3id6_C 167 AKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQI 213 (232)
T ss_dssp HHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEE
T ss_pred HHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEE
Confidence 33468999999976 89 9999999999999999888877664
No 11
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.79 E-value=0.00064 Score=52.07 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCH--HHHHHHHhcC--CcEEee
Q psy7378 15 ALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENE--AVVNYALRKR--DVKLVP 73 (90)
Q Consensus 15 ~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE--~vV~~~l~~~--~~~l~~ 73 (90)
.+....+.+.+++.. +.++|||||.|+|+|||....+++ +.|....... .+++..
T Consensus 297 ~~~~~~~~~~~ll~~----a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i~~ 355 (393)
T 4dmg_A 297 ELPAMKRHLVDLVRE----ALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRVHR 355 (393)
T ss_dssp GHHHHHHHHHHHHHH----HHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHHH----HHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEEEE
Confidence 444555555666555 456679999999999999998887 6777776543 455443
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.24 E-value=0.004 Score=46.73 Aligned_cols=52 Identities=21% Similarity=0.087 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccC--HHHHHHHHhcC--CcEEee
Q psy7378 18 TIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEEN--EAVVNYALRKR--DVKLVP 73 (90)
Q Consensus 18 ~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eEN--E~vV~~~l~~~--~~~l~~ 73 (90)
.....+.+++ ..+.++|+|||.++|++||....++ ++.+...+... .++++.
T Consensus 299 ~~~~~~~~~l----~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 354 (382)
T 1wxx_A 299 RAYRAYKEVN----LRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVVE 354 (382)
T ss_dssp HHHHHHHHHH----HHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHH----HHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3344445554 4455677999999999999888775 56676555444 455554
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.86 E-value=0.0086 Score=44.94 Aligned_cols=44 Identities=20% Similarity=0.153 Sum_probs=30.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccC--HHHHHHHHhcCC--cEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEEN--EAVVNYALRKRD--VKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eEN--E~vV~~~l~~~~--~~l~~ 73 (90)
++..+.++|+|||.++|++|+....+. ++.+.......+ ++++.
T Consensus 317 ~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~ 364 (396)
T 2as0_A 317 VNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGKFLKMLE 364 (396)
T ss_dssp HHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTEEEEESS
T ss_pred HHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEe
Confidence 445566788999999999999776554 566665555443 55544
No 14
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.57 E-value=0.0046 Score=42.24 Aligned_cols=48 Identities=13% Similarity=0.079 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC--CcEEee
Q psy7378 23 SLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR--DVKLVP 73 (90)
Q Consensus 23 Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~--~~~l~~ 73 (90)
+.+++..+++.+.++|||||.+|. .++..++...+.+.++.+ .+++..
T Consensus 114 ~~~l~~~~l~~a~~~LkpGG~lv~---k~~~~~~~~~~~~~l~~~F~~v~~~k 163 (191)
T 3dou_A 114 SYQIGQRVMEIAVRYLRNGGNVLL---KQFQGDMTNDFIAIWRKNFSSYKISK 163 (191)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEE---EEECSTHHHHHHHHHGGGEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHccCCCEEEE---EEcCCCCHHHHHHHHHHhcCEEEEEC
Confidence 345667788888899999999984 445556666667777654 355444
No 15
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.56 E-value=0.0048 Score=45.00 Aligned_cols=56 Identities=7% Similarity=-0.146 Sum_probs=36.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC--CCcccCHHHHHHHHhcC-CcEEee--cCC-CCCCCCcc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS--ILPEENEAVVNYALRKR-DVKLVP--TGL-DFGTEGFV 84 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS--~~~eENE~vV~~~l~~~-~~~l~~--~~~-~~g~dGf~ 84 (90)
++++.+.+.|||||.+++.+|| +.+++...+++.+.+.+ .++... ++. +.|..||+
T Consensus 186 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 247 (296)
T 1inl_A 186 EFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYT 247 (296)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEE
Confidence 3455566778999999999999 45677777777776666 344433 221 13456654
No 16
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=95.33 E-value=0.017 Score=39.47 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=29.8
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||++++++|+. ++...+...+++.++++..+
T Consensus 136 ~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 136 LYDRLWEWLAPGTRIVANAVTL---ESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp HHHHHHHHSCTTCEEEEEECSH---HHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEecCc---ccHHHHHHHHHhCCCcEEEE
Confidence 3455567789999999999874 55666666676666666554
No 17
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.28 E-value=0.009 Score=44.91 Aligned_cols=43 Identities=21% Similarity=0.160 Sum_probs=30.7
Q ss_pred HHHHhhcCCCCCEEEEEcCCCCcc--cCHHHHHHHHhcC--CcEEee
Q psy7378 31 IDCLNARSPTGGYLVYSTCSILPE--ENEAVVNYALRKR--DVKLVP 73 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~~~e--ENE~vV~~~l~~~--~~~l~~ 73 (90)
+..+.++|+|||++++++|+.... ++++.+...+... .+++..
T Consensus 322 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~ 368 (396)
T 3c0k_A 322 NMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIE 368 (396)
T ss_dssp HHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 444556779999999999998776 6678887665543 455543
No 18
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=94.70 E-value=0.03 Score=39.20 Aligned_cols=58 Identities=7% Similarity=-0.069 Sum_probs=39.5
Q ss_pred HHHHHhh-cCCCCCEEEEEc-CCCCcccCHHHHHHHHhcC--CcEEeecC-C--CCCCCCccccC
Q psy7378 30 AIDCLNA-RSPTGGYLVYST-CSILPEENEAVVNYALRKR--DVKLVPTG-L--DFGTEGFVNYR 87 (90)
Q Consensus 30 al~~~~~-~lkpgG~lvYsT-CS~~~eENE~vV~~~l~~~--~~~l~~~~-~--~~g~dGf~~~~ 87 (90)
+|..+.+ .|||||++|+.. |+..+.++++.+..+++.+ ++++.... . ....+||..+.
T Consensus 168 ~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~g~~~~~ 232 (236)
T 2bm8_A 168 IMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMDMLYANASSQLDRGVLRRV 232 (236)
T ss_dssp HHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEETTTTTSCTTTTTCEEEEC
T ss_pred HHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEcchhhcccccccchHhhhc
Confidence 5566665 899999999975 4455567777889999877 57775532 1 23457776553
No 19
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=94.64 E-value=0.082 Score=39.36 Aligned_cols=44 Identities=9% Similarity=-0.100 Sum_probs=29.5
Q ss_pred HHHHHHHhhcCCCCC-EEEEEcCCCCcccCH---HHHHHHHh-cCCcEEee
Q psy7378 28 LEAIDCLNARSPTGG-YLVYSTCSILPEENE---AVVNYALR-KRDVKLVP 73 (90)
Q Consensus 28 ~~al~~~~~~lkpgG-~lvYsTCS~~~eENE---~vV~~~l~-~~~~~l~~ 73 (90)
..+++.+.+.||||| .++|++|+ ..++. ..+..++. +.++++..
T Consensus 257 ~~~l~~~~~~LkpgG~~~~~~~~~--~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 257 RAFVGRGIATLKGPRCAGYFGITR--RESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp HHHHHHHHHTBCSTTCEEEEEECT--TTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred HHHHHHHHHHcccCCeEEEEEEec--CcCCHHHHHHHHHHHHHhcCcchhh
Confidence 345666778889999 56999987 33444 55677776 66665533
No 20
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=94.44 E-value=0.056 Score=37.77 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=34.6
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCC-----c---ccCHHHHHHHHh---cC-CcEEeec-CC-CCCCCCccccC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSIL-----P---EENEAVVNYALR---KR-DVKLVPT-GL-DFGTEGFVNYR 87 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~-----~---eENE~vV~~~l~---~~-~~~l~~~-~~-~~g~dGf~~~~ 87 (90)
.++.+.++|||||+||+..+... + .+....+..+.+ .+ .++...+ +. ..+.|||+..+
T Consensus 152 ~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~DG~~i~~ 223 (248)
T 3tfw_A 152 YLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAW 223 (248)
T ss_dssp HHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSEEEEEEE
T ss_pred HHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCCeeEEEE
Confidence 45666788999999999888765 2 223334444443 34 4655433 11 13578887543
No 21
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=94.40 E-value=0.035 Score=35.76 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=28.2
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
+++.+.++|||||.+++++++. ++...+..+++++++++..
T Consensus 109 ~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 109 VFAAAWKRLPVGGRLVANAVTV---ESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp HHHHHHHTCCTTCEEEEEECSH---HHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHhcCCCCEEEEEeecc---ccHHHHHHHHHHcCCeeEE
Confidence 4566677889999999988875 3445556666666555444
No 22
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=94.24 E-value=0.031 Score=37.87 Aligned_cols=46 Identities=11% Similarity=-0.030 Sum_probs=31.5
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+..+++.+.++|||||.+++.+.+- .+....+...+++.++++..+
T Consensus 158 ~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 158 SVKLLEEAFDHLNPGGKVALYLPDK--EKLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEEESC--HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCeEEEEEeccc--HhHHHHHHHHHHHcCCceEEE
Confidence 3556777889999999999975442 234455566677777766554
No 23
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=94.21 E-value=0.06 Score=35.88 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=27.6
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDV 69 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~ 69 (90)
.+++.+.+.|||||.++.++++. ++...+...+++.++
T Consensus 123 ~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 123 EIIDAVDRRLKSEGVIVLNAVTL---DTLTKAVEFLEDHGY 160 (204)
T ss_dssp HHHHHHHHHCCTTCEEEEEECBH---HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCeEEEEEeccc---ccHHHHHHHHHHCCC
Confidence 45566677789999999988765 455566667777764
No 24
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=93.88 E-value=0.052 Score=36.63 Aligned_cols=58 Identities=10% Similarity=0.047 Sum_probs=33.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCC--------cccCHHHHHHHHh---cC-CcEEeecCC--CCCCCCcccc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSIL--------PEENEAVVNYALR---KR-DVKLVPTGL--DFGTEGFVNY 86 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~--------~eENE~vV~~~l~---~~-~~~l~~~~~--~~g~dGf~~~ 86 (90)
..++.+.++|||||.++...+... ..+....+..+.+ .+ .++...++. ..|.|||+.-
T Consensus 148 ~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~dG~~~~ 219 (223)
T 3duw_A 148 AYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVGSKGYDGFIMA 219 (223)
T ss_dssp HHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccCCCCCCeeEEE
Confidence 456667788999999998766543 1222334444433 34 455444332 3467998754
No 25
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=93.86 E-value=0.022 Score=40.80 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=30.0
Q ss_pred HHHHhhcCCCCCEEEEEcCCCC---cccCHHHHHHHHhcCCcEEee
Q psy7378 31 IDCLNARSPTGGYLVYSTCSIL---PEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~~---~eENE~vV~~~l~~~~~~l~~ 73 (90)
++.+.+.|||||.+++++|+.. .++..+.+...+++.++++..
T Consensus 208 l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 208 IPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp HHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 3444566799999999999842 345566677777777665544
No 26
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.44 E-value=0.1 Score=42.61 Aligned_cols=47 Identities=15% Similarity=0.088 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeecC
Q psy7378 21 KTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 21 ~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~~ 75 (90)
+.+.+|+. .+.++|+|||.|++|+|+-....+++.. ++.+++...+.
T Consensus 634 ~~~~~ll~----~a~~~LkpgG~L~~s~~~~~~~~~~~~l----~~~g~~~~~i~ 680 (703)
T 3v97_A 634 RDHLALMK----DLKRLLRAGGTIMFSNNKRGFRMDLDGL----AKLGLKAQEIT 680 (703)
T ss_dssp HHHHHHHH----HHHHHEEEEEEEEEEECCTTCCCCHHHH----HHTTEEEEECT
T ss_pred HHHHHHHH----HHHHhcCCCcEEEEEECCcccccCHHHH----HHcCCceeeee
Confidence 34444544 4456679999999999996666665444 44666665553
No 27
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=93.37 E-value=0.024 Score=40.07 Aligned_cols=55 Identities=18% Similarity=0.074 Sum_probs=34.9
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeecCC-CCCCCCccc
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGL-DFGTEGFVN 85 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~~~-~~g~dGf~~ 85 (90)
+..+++.+.++|||||.+++.++.. ....+..++++.+++.+.+.. ..|.+.|+.
T Consensus 217 ~~~~l~~~~~~LkpgG~l~~~~~~~----~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~ 272 (276)
T 2b3t_A 217 IVHIIEQSRNALVSGGFLLLEHGWQ----QGEAVRQAFILAGYHDVETCRDYGDNERVTL 272 (276)
T ss_dssp HHHHHHHHGGGEEEEEEEEEECCSS----CHHHHHHHHHHTTCTTCCEEECTTSSEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEECch----HHHHHHHHHHHCCCcEEEEEecCCCCCcEEE
Confidence 3456677788899999999986544 345567777766654333221 235666553
No 28
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=93.31 E-value=0.085 Score=39.71 Aligned_cols=44 Identities=11% Similarity=0.024 Sum_probs=31.2
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCc--ccCHHHHHHHHhcCCcEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILP--EENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~--eENE~vV~~~l~~~~~~l~~ 73 (90)
++..+.++|+|||.|++++|+-.. ++..+.+.......+.+++.
T Consensus 313 ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 358 (385)
T 2b78_A 313 LIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLD 358 (385)
T ss_dssp HHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCcEEE
Confidence 445556778999999999999775 44566777766666655433
No 29
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=93.26 E-value=0.18 Score=37.00 Aligned_cols=39 Identities=23% Similarity=0.208 Sum_probs=29.4
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
..+++.+.+.|||||.+++.|| |+..++.+++ .+++...
T Consensus 297 ~~~~~~~~~~LkpgG~l~i~t~------~~~~~~~~~~-~g~~~~~ 335 (354)
T 3tma_A 297 WDFLRGALALLPPGGRVALLTL------RPALLKRALP-PGFALRH 335 (354)
T ss_dssp HHHHHHHHHTSCTTCEEEEEES------CHHHHHHHCC-TTEEEEE
T ss_pred HHHHHHHHHhcCCCcEEEEEeC------CHHHHHHHhh-cCcEEEE
Confidence 3445566678899999999998 4677788887 7776654
No 30
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=93.05 E-value=0.11 Score=34.13 Aligned_cols=43 Identities=9% Similarity=-0.101 Sum_probs=29.1
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHh--cCCcEEe
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALR--KRDVKLV 72 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~--~~~~~l~ 72 (90)
+..+++.+.++|||||.+++..++. .....+..++. +.++...
T Consensus 143 ~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 143 YRRMAALPPYVLARGRAGVFLEVGH---NQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp HHHHHTCCGGGBCSSSEEEEEECTT---SCHHHHHHHTGGGGGGTEEC
T ss_pred HHHHHHHHHHHhcCCCeEEEEEECC---ccHHHHHHHHHHhhcCCceE
Confidence 3567888889999999965556553 34556667777 5555443
No 31
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.66 E-value=0.24 Score=33.15 Aligned_cols=47 Identities=6% Similarity=-0.170 Sum_probs=29.4
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC----------------------CcccCHHHHHHHHhcCCcEEeecC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI----------------------LPEENEAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~----------------------~~eENE~vV~~~l~~~~~~l~~~~ 75 (90)
.+++.+.+.|||||.++.+.+.- .++|=..-+..++++++++++-.+
T Consensus 122 ~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~ 190 (217)
T 3jwh_A 122 AFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQP 190 (217)
T ss_dssp HHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred HHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEEe
Confidence 45666778899999888766641 222222233367777887776653
No 32
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=92.60 E-value=0.11 Score=36.31 Aligned_cols=47 Identities=21% Similarity=0.180 Sum_probs=32.4
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCc------------ccCHHHHHHHHhcCCcEEeec
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILP------------EENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~------------eENE~vV~~~l~~~~~~l~~~ 74 (90)
.++++.+.++|||||.++.++..-.. -=+++.+...+.+.||+++..
T Consensus 177 ~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 177 RAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEE
Confidence 35677788999999999999742110 004566777788788776654
No 33
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=92.56 E-value=0.13 Score=33.96 Aligned_cols=46 Identities=20% Similarity=0.140 Sum_probs=33.3
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCc------------ccCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILP------------EENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~------------eENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.++.++..... .-....+..++++.||+++..
T Consensus 122 ~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 122 DALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSS 179 (203)
T ss_dssp HHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEE
Confidence 3556667788999999998865542 124677788888888887665
No 34
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=92.44 E-value=0.075 Score=35.42 Aligned_cols=46 Identities=15% Similarity=0.044 Sum_probs=33.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcc-----------cCHHHHHHHHhcCC-cEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPE-----------ENEAVVNYALRKRD-VKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~e-----------ENE~vV~~~l~~~~-~~l~~~ 74 (90)
.+++.+.+.|||||.++.++...... -+.+.+..++++.| |+++..
T Consensus 122 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 122 DVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 34556667789999999987765432 25677788888777 777664
No 35
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=92.06 E-value=0.071 Score=34.28 Aligned_cols=39 Identities=15% Similarity=0.240 Sum_probs=26.0
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCc
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDV 69 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~ 69 (90)
..+++.+.+.|+|||.+++++++. ++...+..++++.++
T Consensus 114 ~~~l~~~~~~l~~gG~l~~~~~~~---~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 114 QEILRIIKDKLKPGGRIIVTAILL---ETKFEAMECLRDLGF 152 (192)
T ss_dssp HHHHHHHHHTEEEEEEEEEEECBH---HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCcEEEEEecCc---chHHHHHHHHHHCCC
Confidence 345666678889999999998863 333444555665543
No 36
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=91.92 E-value=0.12 Score=34.53 Aligned_cols=44 Identities=23% Similarity=0.161 Sum_probs=31.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.++.... ..+...+...++..|++++..
T Consensus 133 ~l~~~~~~L~~gG~l~i~~~~~~-~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 133 FLEEANRVLKPGGLLKVAEVSSR-FEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp HHHHHHHHEEEEEEEEEEECGGG-CSCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHhCCCCeEEEEEEcCCC-CCCHHHHHHHHHHCCCEEEEE
Confidence 45556677899999999876532 235677778888888877664
No 37
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=91.81 E-value=0.18 Score=33.60 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=32.0
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcc---------cCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPE---------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~e---------ENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.++|||||.++.+++..... -+.+.+...+++.||+++..
T Consensus 125 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 125 FLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 4555667789999999988665432 23567778888888876654
No 38
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=91.79 E-value=0.07 Score=37.28 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=28.7
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEe
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLV 72 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~ 72 (90)
+..+++.+.++|||||.+++.. +.+....+...+.++++...
T Consensus 155 ~~~~l~~~~~~LkpgG~l~~~~----~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 155 LEDTIRVAASLLKQGGKANFVH----RPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE----CTTTHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHccCCcEEEEEE----cHHHHHHHHHHHHHCCCceE
Confidence 4566777888899999999943 44555556666766665443
No 39
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=91.71 E-value=0.033 Score=37.71 Aligned_cols=29 Identities=14% Similarity=0.079 Sum_probs=22.9
Q ss_pred HHHhhcCCCCCEEEEEcCCCCcccCHHHH
Q psy7378 32 DCLNARSPTGGYLVYSTCSILPEENEAVV 60 (90)
Q Consensus 32 ~~~~~~lkpgG~lvYsTCS~~~eENE~vV 60 (90)
+.+.+.|||||++++++|+..++++...+
T Consensus 166 ~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 194 (226)
T 1i1n_A 166 QALIDQLKPGGRLILPVGPAGGNQMLEQY 194 (226)
T ss_dssp HHHHHTEEEEEEEEEEESCTTSCEEEEEE
T ss_pred HHHHHhcCCCcEEEEEEecCCCceEEEEE
Confidence 44567789999999999998887775544
No 40
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=91.70 E-value=0.19 Score=34.05 Aligned_cols=45 Identities=13% Similarity=0.036 Sum_probs=32.1
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCccc-------CHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEE-------NEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eE-------NE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.++|||||.++..+.+..... ..+.+..+++..||+++.+
T Consensus 153 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 153 WAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp HHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred HHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 45556677899999998776554332 4677788888888777664
No 41
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=91.58 E-value=0.044 Score=38.77 Aligned_cols=40 Identities=5% Similarity=0.039 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEe
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLV 72 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~ 72 (90)
+++.+++.|||||.+++++|+... ...+...+++.+++..
T Consensus 193 ~l~~~~~~LkpgG~l~i~~~~~~~---~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 193 HVQKIASMMKPGSVATFYLPNFDQ---SEKTVLSLSASGMHHL 232 (275)
T ss_dssp SHHHHHHTEEEEEEEEEEESSHHH---HHHHHHHSGGGTEEEE
T ss_pred HHHHHHHHcCCCCEEEEEeCCHHH---HHHHHHHHHHCCCeEE
Confidence 456667788999999999987632 2233344555555443
No 42
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=91.50 E-value=0.3 Score=33.57 Aligned_cols=29 Identities=7% Similarity=-0.034 Sum_probs=21.0
Q ss_pred HHHHHHHHhcCCcEEeecCCCCCCCCccc
Q psy7378 57 EAVVNYALRKRDVKLVPTGLDFGTEGFVN 85 (90)
Q Consensus 57 E~vV~~~l~~~~~~l~~~~~~~g~dGf~~ 85 (90)
.+.+..+|++.||+++.+....+.++++.
T Consensus 217 ~~el~~ll~~aGF~v~~~~~~~~~~~~~v 245 (263)
T 3pfg_A 217 REQYERAFTAAGLSVEFMPGGPSGRGLFT 245 (263)
T ss_dssp HHHHHHHHHHTTEEEEEESSTTTSSCEEE
T ss_pred HHHHHHHHHHCCCEEEEeeCCCCCceeEE
Confidence 56778888889999988754455566654
No 43
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=91.48 E-value=0.19 Score=33.04 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC
Q psy7378 25 IVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR 67 (90)
Q Consensus 25 ~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~ 67 (90)
++...+++.+.++|||||.++..+.. .++...+...+..+
T Consensus 131 ~~~~~~l~~~~~~LkpgG~lv~~~~~---~~~~~~l~~~l~~~ 170 (201)
T 2plw_A 131 ELTLSITHFMEQYINIGGTYIVKMYL---GSQTNNLKTYLKGM 170 (201)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEC---STTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCCCEEEEEEeC---CCCHHHHHHHHHHH
Confidence 34445667777888999999976533 34555555666554
No 44
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=91.47 E-value=0.19 Score=34.59 Aligned_cols=44 Identities=16% Similarity=0.000 Sum_probs=29.4
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
.+++.+.++|||||.+++..+....+|-+.. ...++..++++..
T Consensus 155 ~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~-~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 155 VLSELCLPLVKKNGLFVALKAASAEEELNAG-KKAITTLGGELEN 198 (240)
T ss_dssp HHHHHHGGGEEEEEEEEEEECC-CHHHHHHH-HHHHHHTTEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEeCCCchHHHHHH-HHHHHHcCCeEeE
Confidence 4567778899999999998887766554433 3445556665543
No 45
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=91.45 E-value=0.27 Score=32.91 Aligned_cols=23 Identities=17% Similarity=0.267 Sum_probs=17.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
++++.+.+.|||||.++.+++..
T Consensus 122 ~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 122 AAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp HHHHHHHHTEEEEEEEEECCCCC
T ss_pred HHHHHHHHhcCCCeEEEEEeccC
Confidence 35566677889999999987654
No 46
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=91.43 E-value=0.12 Score=36.96 Aligned_cols=46 Identities=13% Similarity=-0.012 Sum_probs=30.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCccc-------------------CHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEE-------------------NEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eE-------------------NE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.+++++......- ....+..++++.||+++..
T Consensus 202 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~ 266 (312)
T 3vc1_A 202 DLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI 266 (312)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence 455666777899999999885443321 2344556667777776554
No 47
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=91.37 E-value=0.37 Score=31.98 Aligned_cols=45 Identities=16% Similarity=0.219 Sum_probs=29.4
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCccc---------------------------CHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEE---------------------------NEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eE---------------------------NE~vV~~~l~~~~~~l~~~ 74 (90)
+|+.+.+.|||||.++.++......+ ..+.+..++++.|++++..
T Consensus 127 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 198 (220)
T 3hnr_A 127 AIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFT 198 (220)
T ss_dssp HHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEe
Confidence 45556677899999999875443322 2345566677777777654
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=91.36 E-value=0.23 Score=32.71 Aligned_cols=47 Identities=23% Similarity=0.173 Sum_probs=33.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCccc----------------------------CHHHHHHHHhcCCcEEeecC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEE----------------------------NEAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eE----------------------------NE~vV~~~l~~~~~~l~~~~ 75 (90)
.+++.+.+.|||||.++.++-...... ..+.+..++++.||+++.+.
T Consensus 133 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 207 (227)
T 3e8s_A 133 ELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQ 207 (227)
T ss_dssp HHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEe
Confidence 345666778899999999875322111 45777888888898887753
No 49
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=91.36 E-value=0.16 Score=35.28 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=17.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.++.+.++|||||.|++.+|-.
T Consensus 163 ~l~~~~~~L~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 163 YHERLMKLVKVGGIVAYDNTLW 184 (237)
T ss_dssp HHHHHHHHEEEEEEEEEECTTG
T ss_pred HHHHHHHhcCCCeEEEEecCCc
Confidence 4555667889999999998754
No 50
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=91.01 E-value=0.26 Score=32.90 Aligned_cols=22 Identities=9% Similarity=-0.075 Sum_probs=16.3
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.+.|||||.++...++
T Consensus 122 ~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 122 AFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp HHHHHHHTTTCCSEEEEEEEBG
T ss_pred HHHHHHHHhhCCCEEEEEccch
Confidence 4566677889999977766554
No 51
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=90.91 E-value=0.15 Score=34.76 Aligned_cols=46 Identities=11% Similarity=0.136 Sum_probs=29.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCccc-----------------CHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEE-----------------NEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eE-----------------NE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.++.++++..... ....+...+++.|++.+..
T Consensus 131 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 131 RGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 356667788999999999987643332 2233445566667766553
No 52
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=90.89 E-value=0.2 Score=32.72 Aligned_cols=27 Identities=15% Similarity=0.133 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 25 IVILEAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 25 ~Ll~~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++..+++.+.++|||||.++..++..
T Consensus 122 ~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 122 SLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 344566777778889999999887643
No 53
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=90.36 E-value=0.46 Score=35.10 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=24.9
Q ss_pred HHHHHHhhcCCCCCE-EEEEcCCCCccc--CHHHHHHHHhcCCcEE
Q psy7378 29 EAIDCLNARSPTGGY-LVYSTCSILPEE--NEAVVNYALRKRDVKL 71 (90)
Q Consensus 29 ~al~~~~~~lkpgG~-lvYsTCS~~~eE--NE~vV~~~l~~~~~~l 71 (90)
.+++.+.++|||||. ++..+|+....+ -++.+...+.+.+.++
T Consensus 253 ~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v 298 (332)
T 2igt_A 253 LMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVV 298 (332)
T ss_dssp HHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEE
T ss_pred HHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 345556678899999 566667765322 2344444444455544
No 54
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=90.26 E-value=0.17 Score=35.07 Aligned_cols=46 Identities=24% Similarity=0.294 Sum_probs=30.5
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccC-----------------HHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEEN-----------------EAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eEN-----------------E~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.++.++++....+. ...+...+++.||+.+..
T Consensus 131 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 131 RGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp HHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 4567778889999999999887544332 223444556667766554
No 55
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=90.15 E-value=0.27 Score=31.93 Aligned_cols=45 Identities=24% Similarity=0.228 Sum_probs=24.8
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCc---ccCHHHHHHHHhc--CCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILP---EENEAVVNYALRK--RDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~---eENE~vV~~~l~~--~~~~l~~~ 74 (90)
+++.+.+.|||||+++.+.++-++ +|.+.+.+++-.- .++++...
T Consensus 117 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 166 (185)
T 3mti_A 117 AIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLY 166 (185)
T ss_dssp HHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEe
Confidence 455566778999999988876553 3444444443222 24665554
No 56
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=90.14 E-value=0.3 Score=32.43 Aligned_cols=22 Identities=18% Similarity=0.132 Sum_probs=16.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.+.|||||.++.++...
T Consensus 123 ~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 123 IIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp HHHHHHHHEEEEEEEEEEEEBC
T ss_pred HHHHHHHHcCCCeEEEEEECCc
Confidence 4555567789999999987643
No 57
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=90.13 E-value=0.27 Score=33.42 Aligned_cols=47 Identities=17% Similarity=0.104 Sum_probs=31.6
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCC------------cccCHHHHHHHHhcCCcEEeec
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSIL------------PEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~------------~eENE~vV~~~l~~~~~~l~~~ 74 (90)
..+++.+.++|||||.++.++..-. ..-+++.+..++++.|++++..
T Consensus 178 ~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 178 RTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEE
Confidence 3456677788999999998763210 1124567777888788777654
No 58
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=90.10 E-value=0.35 Score=32.58 Aligned_cols=45 Identities=9% Similarity=0.020 Sum_probs=28.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcc--------cCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPE--------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~e--------ENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||++++.|+...+. -.++.+...+.. +++++.+
T Consensus 121 ~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 121 RYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp HHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 45666778889999977777665421 134555666665 7766554
No 59
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=90.06 E-value=0.11 Score=33.35 Aligned_cols=52 Identities=10% Similarity=0.070 Sum_probs=30.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhc-C-CcEEeecCCCCCCCCccccCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRK-R-DVKLVPTGLDFGTEGFVNYRQ 88 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~-~-~~~l~~~~~~~g~dGf~~~~~ 88 (90)
.+++.+.+.|||||.++.++++... .+.. ...+++ + ++++... .+||+.|..
T Consensus 138 ~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~-~~~l~~~~~~~~~~~~-----~~~~~~~~~ 191 (194)
T 1dus_A 138 RIIEEGKELLKDNGEIWVVIQTKQG--AKSL-AKYMKDVFGNVETVTI-----KGGYRVLKS 191 (194)
T ss_dssp HHHHHHHHHEEEEEEEEEEEESTHH--HHHH-HHHHHHHHSCCEEEEE-----ETTEEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEECCCCC--hHHH-HHHHHHHhcceEEEec-----CCcEEEEEE
Confidence 4556666778999999998887633 2223 333433 3 4555432 245555543
No 60
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=89.90 E-value=0.37 Score=30.85 Aligned_cols=45 Identities=9% Similarity=-0.108 Sum_probs=30.7
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.++.++.+.. .-....+...+++.++++...
T Consensus 128 ~~l~~~~~~l~~~G~l~~~~~~~~-~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 128 PALANIHRALGADGRAVIGFGAGR-GWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp HHHHHHHHHEEEEEEEEEEEETTS-SCCHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEeCCCC-CcCHHHHHHHHHHcCCEEeee
Confidence 345556677899999998765543 234556677777778887765
No 61
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=89.88 E-value=0.93 Score=32.19 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 25 IVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 25 ~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.++++.+...|+|+|.+|.+.- .+...+...|.+++|.+...
T Consensus 96 ~~i~~Il~~~~~~L~~~~~lVlq~~-----~~~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 96 RLIARILEEGLGKLANVERLILQPN-----NREDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp HHHHHHHHHTGGGCTTCCEEEEEES-----SCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECC-----CCHHHHHHHHHHCCCEEEEE
Confidence 3567788888899999999998655 37788888888888887664
No 62
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=89.83 E-value=0.42 Score=33.27 Aligned_cols=23 Identities=13% Similarity=0.138 Sum_probs=17.3
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.+++.+.++|||||.++.++...
T Consensus 149 ~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 149 AFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp HHHHHHHHHSCTTCEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEEecC
Confidence 34556667789999999987654
No 63
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=89.55 E-value=0.68 Score=31.40 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=29.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcc---------------cCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPE---------------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~e---------------ENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.++.++-..... =....+..++++.|++++..
T Consensus 121 ~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 121 ELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp HHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 35566667789999999987653321 12355666777777766554
No 64
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=89.48 E-value=0.54 Score=33.17 Aligned_cols=25 Identities=16% Similarity=0.224 Sum_probs=19.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILP 53 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~ 53 (90)
.+++.+.++|||||.++..+.+...
T Consensus 164 ~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 164 TFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp HHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHhcCCCcEEEEEEEeccC
Confidence 4566677889999999998876553
No 65
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=89.26 E-value=0.22 Score=36.34 Aligned_cols=58 Identities=9% Similarity=0.165 Sum_probs=41.7
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC--CcccCHHHHHHHHhcCCcEEeecCCCCCCCCccccCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI--LPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVNYRQ 88 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~--~~eENE~vV~~~l~~~~~~l~~~~~~~g~dGf~~~~~ 88 (90)
++++.+.++|+|||+||.=-... .+.+ .+.+++|+.++++++..++.. ..+.|..|.+
T Consensus 198 ~~le~~~p~l~~GGvIv~DD~~~~~w~G~-~~A~~ef~~~~~~~i~~~p~~-~~~~y~~~~~ 257 (257)
T 3tos_A 198 AVLEAIRPYLTKGSIVAFDELDNPKWPGE-NIAMRKVLGLDHAPLRLLPGR-PAPAYLRWGD 257 (257)
T ss_dssp HHHHHHGGGEEEEEEEEESSTTCTTCTHH-HHHHHHHTCTTSSCCEECTTC-SCCEEEETTC
T ss_pred HHHHHHHHHhCCCcEEEEcCCCCCCChHH-HHHHHHHHhhCCCeEEEccCC-CCCEEEEecC
Confidence 46777889999999999887642 4544 455588888888777776433 4567888764
No 66
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=89.00 E-value=0.73 Score=31.07 Aligned_cols=51 Identities=8% Similarity=-0.018 Sum_probs=30.6
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeecC----CCCCCCCcc
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTG----LDFGTEGFV 84 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~~----~~~g~dGf~ 84 (90)
.++.+ ++|||||++|+.+|.... .... ...+..+ .++...++ .....|||.
T Consensus 153 ~~~~~-~~LkpgG~lv~~~~~~~~--~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~dG~~ 208 (221)
T 3u81_A 153 LLEKC-GLLRKGTVLLADNVIVPG--TPDF-LAYVRGSSSFECTHYSSYLEYMKVVDGLE 208 (221)
T ss_dssp HHHHT-TCCCTTCEEEESCCCCCC--CHHH-HHHHHHCTTEEEEEEEEEETTTTEEEEEE
T ss_pred HHHhc-cccCCCeEEEEeCCCCcc--hHHH-HHHHhhCCCceEEEcccccccCCCCCceE
Confidence 34445 889999999999998532 2344 4444444 56554432 112457776
No 67
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=88.79 E-value=0.18 Score=33.40 Aligned_cols=44 Identities=16% Similarity=0.222 Sum_probs=31.9
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
..+++.+.++|||||.++.++... +....+...+++.++++...
T Consensus 139 ~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 139 LDLIPQLDSHLNEDGQVIFSGIDY---LQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp HHHGGGSGGGEEEEEEEEEEEEEG---GGHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEecCc---ccHHHHHHHHHHcCCceEEe
Confidence 456777888999999999975443 34556677777778777664
No 68
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=88.75 E-value=0.44 Score=31.32 Aligned_cols=23 Identities=9% Similarity=0.212 Sum_probs=17.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.+++.+.+.|||||.++.++.+.
T Consensus 127 ~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 127 AFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHcCCCeEEEEEeCCC
Confidence 35566667789999999998754
No 69
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=88.72 E-value=0.45 Score=33.31 Aligned_cols=44 Identities=9% Similarity=0.086 Sum_probs=31.9
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
..++..+.++|||||.++.+... .+....+...+++.++++...
T Consensus 198 ~~~l~~~~~~LkpgG~lils~~~---~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 198 AALAPRYREALVPGGRALLTGIL---KDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEE---GGGHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEeec---cCCHHHHHHHHHHCCCEEEEE
Confidence 34566667778999999997653 344666777788888888765
No 70
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=88.62 E-value=0.28 Score=34.65 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=18.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.+|+.+.+.|||||.++.++....
T Consensus 171 ~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 171 GLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCH
T ss_pred HHHHHHHHHcCCCcEEEEEeecCc
Confidence 455666777899999999987764
No 71
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=88.50 E-value=0.24 Score=33.56 Aligned_cols=46 Identities=9% Similarity=0.174 Sum_probs=30.3
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCc------------ccCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILP------------EENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~------------eENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.++.++..... .-..+.+..++++.||+++..
T Consensus 178 ~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 178 KFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 3455566778999999998842211 124566777787777776654
No 72
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=88.28 E-value=0.24 Score=34.28 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=17.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.+.|||||.++.+++.
T Consensus 155 ~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 155 IAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEECC
Confidence 4566677888999999998876
No 73
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=88.26 E-value=0.45 Score=33.21 Aligned_cols=54 Identities=7% Similarity=0.048 Sum_probs=30.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC-----CcccC---HHHHHHHH---hcC-CcEEeecCCCCCCCCcccc
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI-----LPEEN---EAVVNYAL---RKR-DVKLVPTGLDFGTEGFVNY 86 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~-----~~eEN---E~vV~~~l---~~~-~~~l~~~~~~~g~dGf~~~ 86 (90)
.++.+.++|||||.||+..+.. .+..+ ...+..+. ... .++..-++. +|||+..
T Consensus 152 ~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~---~dG~~~~ 217 (242)
T 3r3h_A 152 YYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI---ADGMFLV 217 (242)
T ss_dssp HHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS---SSCEEEE
T ss_pred HHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc---cCceEEE
Confidence 4566678889999999865543 23333 22344443 334 465544332 4777654
No 74
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=88.24 E-value=0.17 Score=35.66 Aligned_cols=44 Identities=20% Similarity=0.064 Sum_probs=29.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
.+++.+.++|||||++++..+....+|-+.. ...++..++++..
T Consensus 165 ~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~-~~~l~~~G~~~~~ 208 (249)
T 3g89_A 165 VLSELLLPFLEVGGAAVAMKGPRVEEELAPL-PPALERLGGRLGE 208 (249)
T ss_dssp HHHHHHGGGEEEEEEEEEEECSCCHHHHTTH-HHHHHHHTEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEeCCCcHHHHHHH-HHHHHHcCCeEEE
Confidence 4566778899999999998887665554333 3445555555433
No 75
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=87.67 E-value=0.68 Score=31.49 Aligned_cols=22 Identities=9% Similarity=0.176 Sum_probs=16.5
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
++++.+.+.|||||.++.++.+
T Consensus 126 ~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 126 DICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEEeCC
Confidence 3455666778999999998644
No 76
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=87.41 E-value=0.62 Score=33.02 Aligned_cols=25 Identities=8% Similarity=0.052 Sum_probs=18.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILP 53 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~ 53 (90)
.+++.+.++|||||.++.++.....
T Consensus 175 ~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 175 DFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp HHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHhcCCCcEEEEEEeccCC
Confidence 3455666778999999998877644
No 77
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=87.27 E-value=0.35 Score=32.90 Aligned_cols=46 Identities=13% Similarity=0.098 Sum_probs=31.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCc-----------ccCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILP-----------EENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~-----------eENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.++.++..... .-+.+.+..++++.|++++..
T Consensus 166 ~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 166 EFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 4556666778999999997643221 115677788888888877665
No 78
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=87.19 E-value=0.46 Score=33.25 Aligned_cols=20 Identities=20% Similarity=0.207 Sum_probs=15.6
Q ss_pred HHHHHHhhcCCCCCEEEEEc
Q psy7378 29 EAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsT 48 (90)
..++.+.++|||||.+++..
T Consensus 171 ~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 171 NYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHHHHHHHHBCTTCCEEEEC
T ss_pred HHHHHHHHhCCCCeEEEEec
Confidence 34566677889999999865
No 79
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=86.76 E-value=0.54 Score=31.55 Aligned_cols=45 Identities=11% Similarity=0.130 Sum_probs=30.4
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCccc------------------CHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEE------------------NEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eE------------------NE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.++....... ....+..++++.|++++..
T Consensus 135 ~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 135 ALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp HHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 34555667899999999885443221 2345677788888887765
No 80
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=86.67 E-value=0.57 Score=29.86 Aligned_cols=43 Identities=7% Similarity=-0.067 Sum_probs=28.6
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCccc---------CHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEE---------NEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eE---------NE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.++......+ ..+.+..+++ +|+++..
T Consensus 94 ~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~ 145 (170)
T 3i9f_A 94 VISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKR 145 (170)
T ss_dssp HHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEc
Confidence 44555677899999999876554322 2456666666 7776654
No 81
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=86.61 E-value=0.77 Score=30.51 Aligned_cols=46 Identities=9% Similarity=0.060 Sum_probs=30.9
Q ss_pred HHHHHHh-hcCCCCCEEEEEcCCCCc-----------------------------ccCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLN-ARSPTGGYLVYSTCSILP-----------------------------EENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~-~~lkpgG~lvYsTCS~~~-----------------------------eENE~vV~~~l~~~~~~l~~~ 74 (90)
.+|+.+. +.|||||.++.++..... .=+...+..++++.|++++..
T Consensus 121 ~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 121 ALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 3566677 888999999998743321 014556677777778777654
No 82
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=86.47 E-value=0.47 Score=32.15 Aligned_cols=46 Identities=11% Similarity=-0.057 Sum_probs=29.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCc------------------ccCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILP------------------EENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~------------------eENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.+.|||||.++.++.+... .-....+..++++.|++.+..
T Consensus 140 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 203 (266)
T 3ujc_A 140 KLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVS 203 (266)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEE
Confidence 3455666778999999998753332 113445566666677766553
No 83
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=86.34 E-value=0.6 Score=31.31 Aligned_cols=23 Identities=4% Similarity=-0.130 Sum_probs=17.0
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
+++.+.+.|||||.++.++....
T Consensus 130 ~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 130 LYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp HHHHHHHHEEEEEEEEEEEECBC
T ss_pred HHHHHHHhcCCCcEEEEEEecCC
Confidence 45555677899999999886543
No 84
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=86.27 E-value=0.6 Score=32.73 Aligned_cols=47 Identities=21% Similarity=0.171 Sum_probs=30.6
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCC------------CcccCHHHHHHHHhcCCcEEeec
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSI------------LPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~------------~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
..+|+.+.++|||||.++.+...- ..-=+.+.+...+++.||+++..
T Consensus 195 ~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 195 QRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 456777889999999999864210 00113566777787777766543
No 85
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=86.13 E-value=1 Score=30.11 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=23.8
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.+|-.. +--..+...+.+.++++...
T Consensus 138 ~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 138 FLDTFKRILPENGEIHFKTDNR---GLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp HHHHHHHHSCTTCEEEEEESCH---HHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEeCCH---HHHHHHHHHHHHCCCeeeec
Confidence 4555567789999999876321 11122333344456766554
No 86
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=85.97 E-value=0.08 Score=40.67 Aligned_cols=23 Identities=17% Similarity=0.258 Sum_probs=16.5
Q ss_pred HHHHhhcCCCCCEEEEEcCCCCcc
Q psy7378 31 IDCLNARSPTGGYLVYSTCSILPE 54 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~~~e 54 (90)
++.+.++|+||| ++|+||+-...
T Consensus 141 l~~a~~~Lk~gG-ll~~t~t~~~~ 163 (392)
T 3axs_A 141 IESVALSMKRGG-ILSLTATDTAP 163 (392)
T ss_dssp HHHHHHHEEEEE-EEEEEECCHHH
T ss_pred HHHHHHHhCCCC-EEEEEecchhh
Confidence 344455679999 88999987663
No 87
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=85.48 E-value=0.18 Score=34.91 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=15.9
Q ss_pred HHHHHHhhcCCCCCEEEEEc
Q psy7378 29 EAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsT 48 (90)
.+++.+.++|||||+++|.+
T Consensus 151 ~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 151 FIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HHHHTHHHHEEEEEEEEECC
T ss_pred hhhhhhhheeCCCCEEEEEe
Confidence 45666778899999999854
No 88
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=85.45 E-value=0.91 Score=31.17 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=18.0
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
...+++.+.+.|||||.++.+.++.
T Consensus 193 ~~~~l~~~~~~LkpgG~l~~~~~~~ 217 (250)
T 1o9g_A 193 VAGLLRSLASALPAHAVIAVTDRSR 217 (250)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred HHHHHHHHHHhcCCCcEEEEeCcch
Confidence 3345566677889999999966654
No 89
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=85.26 E-value=0.09 Score=39.89 Aligned_cols=22 Identities=14% Similarity=0.064 Sum_probs=16.1
Q ss_pred HHHHhhcCCCCCEEEEEcCCCCc
Q psy7378 31 IDCLNARSPTGGYLVYSTCSILP 53 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~~~ 53 (90)
++.+++.||||| ++|.||+-..
T Consensus 147 l~~a~~~lk~gG-~l~vt~td~~ 168 (378)
T 2dul_A 147 LDTALRSAKRRG-ILGVTATDGA 168 (378)
T ss_dssp HHHHHHHEEEEE-EEEEEECCHH
T ss_pred HHHHHHhcCCCC-EEEEEeecch
Confidence 444556679999 7899998555
No 90
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=85.25 E-value=0.86 Score=30.51 Aligned_cols=45 Identities=16% Similarity=0.090 Sum_probs=30.4
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcc--------------------cCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPE--------------------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~e--------------------ENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.++...... =+...+..++++.|++++.+
T Consensus 121 ~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 121 ALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 4555567789999999987543211 14566777888888877654
No 91
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=84.32 E-value=0.43 Score=29.80 Aligned_cols=36 Identities=17% Similarity=0.096 Sum_probs=22.5
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhc
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRK 66 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~ 66 (90)
..+++.+.++|||||.++.++-. .++...+...+..
T Consensus 116 ~~~l~~~~~~L~~gG~l~~~~~~---~~~~~~~~~~~~~ 151 (180)
T 1ej0_A 116 ELALEMCRDVLAPGGSFVVKVFQ---GEGFDEYLREIRS 151 (180)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEES---STTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEEec---CCcHHHHHHHHHH
Confidence 45566667778999999976643 3344444444443
No 92
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=84.03 E-value=0.36 Score=35.50 Aligned_cols=42 Identities=7% Similarity=-0.039 Sum_probs=27.2
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcE
Q psy7378 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVK 70 (90)
Q Consensus 26 Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~ 70 (90)
++.++++.+.+.|||||.++..+-.. ...+ .+..++++++|.
T Consensus 149 l~~~~l~~a~r~LkpGG~~v~~~~~~--~~~~-~l~~~l~~~GF~ 190 (290)
T 2xyq_A 149 FFTYLCGFIKQKLALGGSIAVKITEH--SWNA-DLYKLMGHFSWW 190 (290)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECSS--SCCH-HHHHHHTTEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecc--CCHH-HHHHHHHHcCCc
Confidence 44567777888899999999865222 2233 455666665543
No 93
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=84.01 E-value=0.27 Score=32.83 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=29.2
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCC-------cccCHHHHHHHHh---cC-CcEEeecCCCCCCCCccc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSIL-------PEENEAVVNYALR---KR-DVKLVPTGLDFGTEGFVN 85 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~-------~eENE~vV~~~l~---~~-~~~l~~~~~~~g~dGf~~ 85 (90)
.+++.+.++|||||.+++.++-.. ..+....+..+++ .+ .+....++ -.+||..
T Consensus 141 ~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p---~~~G~~~ 205 (210)
T 3c3p_A 141 DVLERMNRCLAKNALLIAVNALRRGSVAESHEDPETAALREFNHHLSRRRDFFTTIVP---VGNGVLL 205 (210)
T ss_dssp HHHHHHGGGEEEEEEEEEESSSSCC------------CCCHHHHHHTTCTTEEEEEEC---STTCEEE
T ss_pred HHHHHHHHhcCCCeEEEEECccccCcccCcccchHHHHHHHHHHHHhhCCCeEEEEEe---cCCceEE
Confidence 356667788999999999776543 2333344444443 22 45444332 2377754
No 94
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=84.01 E-value=0.44 Score=32.38 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=17.5
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+|+.+.+.|||||.++.++..
T Consensus 121 ~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 121 GAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp HHHHHHTTSEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEecCc
Confidence 4567778899999999997643
No 95
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=83.62 E-value=0.83 Score=30.42 Aligned_cols=47 Identities=13% Similarity=0.108 Sum_probs=28.2
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCC---------------CCcccCHHHHHHHHhcCCcEEeec
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCS---------------ILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS---------------~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
..+++.+.+.|||||.++.+.-. +.++.-.+.+...+...+|++..+
T Consensus 120 ~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 120 PEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp SHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 34566677888999999985321 111111233445666678887665
No 96
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=83.56 E-value=0.39 Score=31.43 Aligned_cols=23 Identities=13% Similarity=0.212 Sum_probs=18.0
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.+++.+.+.|||||.++..+.+.
T Consensus 140 ~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 140 QVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHhCcCCCEEEEEeCCC
Confidence 45566667789999999988764
No 97
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=83.25 E-value=0.33 Score=35.28 Aligned_cols=22 Identities=18% Similarity=0.403 Sum_probs=18.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.++|||||.++.+|..
T Consensus 150 ~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 150 TVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEeCC
Confidence 4667778889999999998874
No 98
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=83.21 E-value=0.51 Score=32.24 Aligned_cols=18 Identities=11% Similarity=-0.125 Sum_probs=14.6
Q ss_pred HHHHhhcCCCCCEEEEEc
Q psy7378 31 IDCLNARSPTGGYLVYST 48 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsT 48 (90)
++.+.+.|||||++++++
T Consensus 144 l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 144 KANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEE
Confidence 555667789999999984
No 99
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=83.19 E-value=0.44 Score=32.29 Aligned_cols=23 Identities=13% Similarity=0.239 Sum_probs=17.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.+++.+.++|||||.++++++..
T Consensus 141 ~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 141 RFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp HHHHHHGGGEEEEEEEEEETTTC
T ss_pred HHHHHHHHHcCCCeEEEEEcCCc
Confidence 45666778899999999997533
No 100
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=83.07 E-value=0.61 Score=31.13 Aligned_cols=21 Identities=10% Similarity=0.344 Sum_probs=16.2
Q ss_pred HHHHHHhhcCCCCCEEEEEcC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTC 49 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTC 49 (90)
.+++.+.+.|||||.++.++-
T Consensus 123 ~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 123 KYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp HHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEec
Confidence 456667788999999998554
No 101
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=82.69 E-value=4.1 Score=29.75 Aligned_cols=46 Identities=0% Similarity=-0.088 Sum_probs=28.6
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCccc--------------------------CHHHHHHHHhcCCcEEeecC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEE--------------------------NEAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eE--------------------------NE~vV~~~l~~~~~~l~~~~ 75 (90)
+|+.+.+.|||||+|+.......... .+.....++++.||+.+.+.
T Consensus 269 ~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~ 340 (363)
T 3dp7_A 269 ILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQ 340 (363)
T ss_dssp HHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCC
T ss_pred HHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEE
Confidence 34555666799999988665443211 34455566666677776654
No 102
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=82.61 E-value=3.3 Score=29.48 Aligned_cols=45 Identities=16% Similarity=0.103 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 25 IVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 25 ~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.++++.+...|+++|.+|-+.- .+++.|...|.+++|.+.+.
T Consensus 102 ~lI~~IL~~~~~~l~~~~~lIlqp~-----~~~~~lr~~L~~~Gf~i~~E 146 (230)
T 3lec_A 102 RLIADILNNDIDKLQHVKTLVLQPN-----NREDDLRKWLAANDFEIVAE 146 (230)
T ss_dssp HHHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHhCcCCEEEEECC-----CChHHHHHHHHHCCCEEEEE
Confidence 4677788888888999999987663 35788888898888887664
No 103
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=82.55 E-value=1.3 Score=30.78 Aligned_cols=45 Identities=13% Similarity=0.102 Sum_probs=30.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCc------------------------------ccCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILP------------------------------EENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~------------------------------eENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.++|||||.++.++..... .=....+..++++.||+++..
T Consensus 155 ~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~ 229 (285)
T 4htf_A 155 VLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGK 229 (285)
T ss_dssp HHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeee
Confidence 456667788999999988753211 112456677777788887764
No 104
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=82.47 E-value=0.51 Score=31.29 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=24.5
Q ss_pred HHHHHHhhcCCCCCEEEEEcC------CCCcccCHHHHHHHHh
Q psy7378 29 EAIDCLNARSPTGGYLVYSTC------SILPEENEAVVNYALR 65 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTC------S~~~eENE~vV~~~l~ 65 (90)
++++.+.++|||||.++.+|. +.....+.+.+..++.
T Consensus 135 ~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (216)
T 3ofk_A 135 TAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILT 177 (216)
T ss_dssp HHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHH
Confidence 456667788899999999762 2333455555555554
No 105
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=82.46 E-value=0.69 Score=30.24 Aligned_cols=44 Identities=14% Similarity=-0.051 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCccc--CHHHHHHHHhcC---CcEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEE--NEAVVNYALRKR---DVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eE--NE~vV~~~l~~~---~~~l~~ 73 (90)
+++.+.++|||||+++.++++-.+.. ....+..+++.. ++++..
T Consensus 121 ~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~ 169 (197)
T 3eey_A 121 ALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQR 169 (197)
T ss_dssp HHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEE
T ss_pred HHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEE
Confidence 45556677899999998876544322 233444455432 455544
No 106
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=82.18 E-value=2.7 Score=30.39 Aligned_cols=46 Identities=9% Similarity=0.063 Sum_probs=29.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcc---------------------cCHHHHHHHHhcCCcEEeecC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPE---------------------ENEAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~e---------------------ENE~vV~~~l~~~~~~l~~~~ 75 (90)
+|+.+.+.|||||+++......... -+++....++++.||+.+.+.
T Consensus 268 ~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 334 (348)
T 3lst_A 268 ILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVV 334 (348)
T ss_dssp HHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 4555667789999998866533221 134455666676777776653
No 107
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=82.15 E-value=1.2 Score=30.24 Aligned_cols=22 Identities=9% Similarity=0.034 Sum_probs=16.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.+.|||||.++.++...
T Consensus 106 ~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 106 AVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp HHHHHHHHEEEEEEEEEEEECB
T ss_pred HHHHHHHHcCCCcEEEEEEcCC
Confidence 4555667789999999876543
No 108
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=82.12 E-value=1.1 Score=29.33 Aligned_cols=24 Identities=8% Similarity=0.059 Sum_probs=18.6
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.+++.+.+.|||||.++.++.+..
T Consensus 112 ~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 112 QLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp HHHHHHHTTCCSSEEEEEEEECTT
T ss_pred HHHHHHHHhcCCCcEEEEEEeccc
Confidence 456667788999999999876543
No 109
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=82.09 E-value=1 Score=30.98 Aligned_cols=22 Identities=23% Similarity=0.273 Sum_probs=17.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.++.+.++|||||.++...+..
T Consensus 145 ~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 145 LVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp HHHHHHHHEEEEEEEEETTTTG
T ss_pred HHHHHHHHcCCCcEEEEeCCCC
Confidence 3555667789999999988765
No 110
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=82.00 E-value=0.46 Score=31.93 Aligned_cols=18 Identities=11% Similarity=-0.095 Sum_probs=15.9
Q ss_pred hhcCCCCCEEEEEcCCCC
Q psy7378 35 NARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 35 ~~~lkpgG~lvYsTCS~~ 52 (90)
.++|||||.+++++|+..
T Consensus 150 ~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 150 NNWLKPNALIYVETEKDK 167 (201)
T ss_dssp TTCEEEEEEEEEEEESSS
T ss_pred cCccCCCcEEEEEECCCC
Confidence 567999999999999876
No 111
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=81.98 E-value=0.79 Score=35.12 Aligned_cols=47 Identities=11% Similarity=-0.007 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC--CcEE
Q psy7378 25 IVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR--DVKL 71 (90)
Q Consensus 25 ~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~--~~~l 71 (90)
+.+..+++.+.+.|+|||+++--+||.+..|--...+..+++. .+..
T Consensus 291 eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 291 EFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred HHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEE
Confidence 4555566666788999999999999998866666666656554 4554
No 112
>2hlg_A Fruit-specific protein; beta antiparallel, plant protein; NMR {Lycopersicon esculentum}
Probab=81.95 E-value=0.38 Score=25.87 Aligned_cols=13 Identities=46% Similarity=1.012 Sum_probs=9.3
Q ss_pred CCCEEEEEcCCCCc
Q psy7378 40 TGGYLVYSTCSILP 53 (90)
Q Consensus 40 pgG~lvYsTCS~~~ 53 (90)
|+|. .|+|||+.|
T Consensus 27 ~~G~-ty~~Cs~lP 39 (39)
T 2hlg_A 27 QYGL-TYRTCNLLP 39 (39)
T ss_dssp SSCC-EEEEEESCC
T ss_pred CCCc-cceeeccCC
Confidence 3443 399999986
No 113
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=81.71 E-value=0.71 Score=31.63 Aligned_cols=53 Identities=17% Similarity=0.144 Sum_probs=32.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCC--------cccCHHHHHHHHh---cC-CcEEeecCCCCCCCCccc
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSIL--------PEENEAVVNYALR---KR-DVKLVPTGLDFGTEGFVN 85 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~--------~eENE~vV~~~l~---~~-~~~l~~~~~~~g~dGf~~ 85 (90)
.++.+.++|+|||.+|+..+... ..+....+..+.+ .. .+....++. .|||..
T Consensus 164 ~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~---~dG~~~ 228 (232)
T 3cbg_A 164 YYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPL---GDGMTL 228 (232)
T ss_dssp HHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECS---BTCEEE
T ss_pred HHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEc---CCeEEE
Confidence 45666788999999999888764 2333445555553 22 455444432 377753
No 114
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=81.49 E-value=0.39 Score=31.54 Aligned_cols=24 Identities=25% Similarity=0.243 Sum_probs=18.5
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.+++.+.+.|||||.++.++.+..
T Consensus 109 ~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 109 EAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEETT
T ss_pred HHHHHHHHHcCCCcEEEEEEeccc
Confidence 345566677899999999988753
No 115
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=81.38 E-value=1.3 Score=30.16 Aligned_cols=20 Identities=5% Similarity=0.094 Sum_probs=15.6
Q ss_pred HHHHHhhcCCCCCEEEEEcC
Q psy7378 30 AIDCLNARSPTGGYLVYSTC 49 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTC 49 (90)
+++.+.++|||||.+|...+
T Consensus 158 ~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 158 FFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp HHHHHGGGEEEEEEEEEECT
T ss_pred HHHHHHHhcCCCeEEEEeeC
Confidence 56667788999999998443
No 116
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=81.21 E-value=1.4 Score=30.16 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=17.2
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.+.|||||.++.++..
T Consensus 147 ~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 147 RALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEEee
Confidence 3556677889999999998754
No 117
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=81.15 E-value=0.82 Score=32.61 Aligned_cols=23 Identities=13% Similarity=0.047 Sum_probs=17.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.++.+.+.|+|||+++..+++..
T Consensus 175 ~l~~~~~~L~pgG~lv~~~~~~~ 197 (281)
T 1mjf_A 175 FYRYVYDALNNPGIYVTQAGSVY 197 (281)
T ss_dssp HHHHHHHHEEEEEEEEEEEEETT
T ss_pred HHHHHHHhcCCCcEEEEEcCCcc
Confidence 44555677899999999887753
No 118
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=80.92 E-value=0.88 Score=30.81 Aligned_cols=19 Identities=16% Similarity=0.247 Sum_probs=14.6
Q ss_pred HHHHHhhcCCCCCEEEEEc
Q psy7378 30 AIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsT 48 (90)
+++.+.+.|||||.++++|
T Consensus 135 ~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 135 FLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp HHHHHHHHHTTSCEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEe
Confidence 3455566679999999987
No 119
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=80.89 E-value=1 Score=31.43 Aligned_cols=22 Identities=5% Similarity=-0.044 Sum_probs=16.5
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+|+.+.+.|||||.++.++..
T Consensus 168 ~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 168 KVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEEec
Confidence 3455666778999999998753
No 120
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=80.77 E-value=1.9 Score=30.48 Aligned_cols=46 Identities=17% Similarity=0.048 Sum_probs=31.1
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCc-----------------------------------ccCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILP-----------------------------------EENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~-----------------------------------eENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.++.+..+ --..+.+..++++.||+.+..
T Consensus 209 ~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~ 288 (305)
T 3ocj_A 209 LYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRF 288 (305)
T ss_dssp HHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEE
Confidence 345556678999999998744211 024566777888888888775
Q ss_pred C
Q psy7378 75 G 75 (90)
Q Consensus 75 ~ 75 (90)
.
T Consensus 289 ~ 289 (305)
T 3ocj_A 289 E 289 (305)
T ss_dssp E
T ss_pred E
Confidence 4
No 121
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=80.55 E-value=0.32 Score=35.73 Aligned_cols=22 Identities=27% Similarity=0.182 Sum_probs=17.7
Q ss_pred HHHHhhcCCCCCEEEEEcCCCC
Q psy7378 31 IDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~~ 52 (90)
++.+.++|+|||.++|++|+..
T Consensus 274 l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 274 IDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp HHHHHHHEEEEEEEEEEEEESS
T ss_pred HHHHHHHcCCCCEEEEEEeecC
Confidence 3444566799999999999988
No 122
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=79.80 E-value=2.1 Score=27.90 Aligned_cols=26 Identities=12% Similarity=0.102 Sum_probs=18.7
Q ss_pred HHHHHHHhh--cCCCCCEEEEEcCCCCc
Q psy7378 28 LEAIDCLNA--RSPTGGYLVYSTCSILP 53 (90)
Q Consensus 28 ~~al~~~~~--~lkpgG~lvYsTCS~~~ 53 (90)
.++++.+.+ +|||||.++..+.+-..
T Consensus 131 ~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 131 DAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred HHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 345555556 89999999998876543
No 123
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=79.33 E-value=0.69 Score=31.40 Aligned_cols=22 Identities=14% Similarity=0.076 Sum_probs=15.9
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.+.|||||.++..+.+.
T Consensus 180 ~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 180 VLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp GHHHHHHHEEEEEEEEEEESCH
T ss_pred HHHHHHHhCCCCCEEEEEeCCH
Confidence 3455566779999999877554
No 124
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=78.64 E-value=0.35 Score=32.97 Aligned_cols=23 Identities=17% Similarity=0.088 Sum_probs=17.8
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCC
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS 50 (90)
..+++.+.++|||||++++..++
T Consensus 150 ~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 150 NFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp HHHHHTHHHHEEEEEEEEECCHH
T ss_pred HHHHHHHHHhcCCCeEEEEEecC
Confidence 34566777888999999987665
No 125
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=78.58 E-value=0.67 Score=32.43 Aligned_cols=22 Identities=18% Similarity=0.034 Sum_probs=16.6
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.+.|+|||.++..+++.
T Consensus 195 ~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 195 YIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp THHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHHHcCCCCEEEEEeCCH
Confidence 3455566789999999988764
No 126
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=78.18 E-value=0.8 Score=31.83 Aligned_cols=22 Identities=23% Similarity=0.305 Sum_probs=17.5
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
++++.+.+.|||||.++.+++.
T Consensus 156 ~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 156 LALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCeEEEEEeCC
Confidence 4566677788999999998765
No 127
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=77.85 E-value=4.9 Score=28.62 Aligned_cols=44 Identities=9% Similarity=0.058 Sum_probs=26.5
Q ss_pred HHHHhhcCCCCCEEEEEcCCCCcc------------------cCHHHHHHHHhcCCcEEeec
Q psy7378 31 IDCLNARSPTGGYLVYSTCSILPE------------------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~~~e------------------ENE~vV~~~l~~~~~~l~~~ 74 (90)
|+.+.+.|||||.|+......... -.++....++++.||+.+.+
T Consensus 257 l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 318 (332)
T 3i53_A 257 LRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAA 318 (332)
T ss_dssp HHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 344455569999998866544321 12445566666677776665
No 128
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=77.79 E-value=2.1 Score=28.00 Aligned_cols=22 Identities=14% Similarity=0.160 Sum_probs=17.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.+.|||||.++.++-.
T Consensus 111 ~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 111 AVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp HHHHHTGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEEeCC
Confidence 3566677889999999998643
No 129
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=77.56 E-value=1.2 Score=32.57 Aligned_cols=39 Identities=15% Similarity=0.139 Sum_probs=23.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC--CcccCHHHHHHHHhcC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI--LPEENEAVVNYALRKR 67 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~--~~eENE~vV~~~l~~~ 67 (90)
++++.+.+.|||||.++..+.+. .+++-..+++.+-+.+
T Consensus 211 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 251 (321)
T 2pt6_A 211 NFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLF 251 (321)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHC
Confidence 34555667789999999977654 3333344444433333
No 130
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=77.15 E-value=3.8 Score=29.81 Aligned_cols=18 Identities=0% Similarity=0.036 Sum_probs=14.1
Q ss_pred HHHHHhhcCCCCCEEEEE
Q psy7378 30 AIDCLNARSPTGGYLVYS 47 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYs 47 (90)
+|..+.+.|||||.+|..
T Consensus 173 ~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 173 VLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp HHHHHHHHCCTTCEEEEE
T ss_pred HHHHHHHHhCCCCEEEEE
Confidence 566677889999988763
No 131
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=77.11 E-value=3 Score=30.62 Aligned_cols=21 Identities=19% Similarity=0.088 Sum_probs=16.6
Q ss_pred HHHHHHHhhcCCCCCEEEEEc
Q psy7378 28 LEAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsT 48 (90)
..+|..+.++|||||.+|...
T Consensus 165 ~~vL~e~~rvLkpGG~lv~lv 185 (291)
T 3hp7_A 165 NLILPALAKILVDGGQVVALV 185 (291)
T ss_dssp GGTHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHHcCcCCEEEEEE
Confidence 345677778899999999973
No 132
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=76.67 E-value=6 Score=24.76 Aligned_cols=39 Identities=15% Similarity=0.150 Sum_probs=23.2
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
+++.+.++ |||.+++++|+... ...+...++++++.+..
T Consensus 115 ~l~~~~~~--~gG~l~~~~~~~~~---~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 115 IIEILDKK--KINHIVANTIVLEN---AAKIINEFESRGYNVDA 153 (183)
T ss_dssp HHHHHHHT--TCCEEEEEESCHHH---HHHHHHHHHHTTCEEEE
T ss_pred HHHHHhhC--CCCEEEEEeccccc---HHHHHHHHHHcCCeEEE
Confidence 34444444 99999999976432 33345556666554433
No 133
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=76.25 E-value=0.83 Score=29.28 Aligned_cols=20 Identities=10% Similarity=-0.029 Sum_probs=16.9
Q ss_pred hhcCCCCCEEEEEcCCCCcc
Q psy7378 35 NARSPTGGYLVYSTCSILPE 54 (90)
Q Consensus 35 ~~~lkpgG~lvYsTCS~~~e 54 (90)
.++|||||.++.++|+-...
T Consensus 141 ~~~L~~gG~l~~~~~~~~~~ 160 (187)
T 2fhp_A 141 RQLLTNEAVIVCETDKTVKL 160 (187)
T ss_dssp TTCEEEEEEEEEEEETTCCC
T ss_pred hcccCCCCEEEEEeCCcccc
Confidence 67899999999999887653
No 134
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=76.15 E-value=1.5 Score=31.37 Aligned_cols=24 Identities=17% Similarity=0.158 Sum_probs=18.2
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
+.++.+.+.|+|||+++..++|..
T Consensus 173 ~~l~~~~~~L~pgG~lv~~~~~~~ 196 (283)
T 2i7c_A 173 NFYEKIYNALKPNGYCVAQCESLW 196 (283)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHHHHHHhcCCCcEEEEECCCcc
Confidence 345666677899999999887643
No 135
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=76.07 E-value=0.81 Score=31.87 Aligned_cols=22 Identities=14% Similarity=-0.010 Sum_probs=17.0
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.+.|||||.++.+|+.
T Consensus 149 ~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 149 TLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp HHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHCCCCCEEEEEeCC
Confidence 3456667778999999998863
No 136
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=75.87 E-value=3.5 Score=29.09 Aligned_cols=45 Identities=4% Similarity=-0.053 Sum_probs=27.9
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCccc-----------------------CHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEE-----------------------NEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eE-----------------------NE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.......... .++.+..++++.||+.+.+
T Consensus 253 ~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~ 320 (335)
T 2r3s_A 253 LLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQL 320 (335)
T ss_dssp HHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeE
Confidence 34455566799998887665443211 2555666677777766654
No 137
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=75.77 E-value=1.7 Score=29.34 Aligned_cols=22 Identities=18% Similarity=0.229 Sum_probs=17.2
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.+.|||||.++.++..
T Consensus 113 ~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 113 AVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp HHHHHHGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEEeCC
Confidence 3566677889999999998743
No 138
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=75.65 E-value=1.3 Score=32.87 Aligned_cols=16 Identities=13% Similarity=0.198 Sum_probs=12.9
Q ss_pred cCCCCCEEEEEcCCCC
Q psy7378 37 RSPTGGYLVYSTCSIL 52 (90)
Q Consensus 37 ~lkpgG~lvYsTCS~~ 52 (90)
.|+++|.|||++|+..
T Consensus 315 ~l~~~g~ivyvsc~p~ 330 (369)
T 3bt7_A 315 MVQAYPRILYISCNPE 330 (369)
T ss_dssp HHTTSSEEEEEESCHH
T ss_pred HHhCCCEEEEEECCHH
Confidence 3479999999999754
No 139
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=75.55 E-value=0.83 Score=30.53 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=16.2
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.+.|||||.++.++.+
T Consensus 118 ~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 118 QTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEEEcCC
Confidence 3455666778999999987654
No 140
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=74.65 E-value=0.95 Score=30.24 Aligned_cols=19 Identities=26% Similarity=0.454 Sum_probs=15.0
Q ss_pred HHHHHhhcCCCCCEEEEEc
Q psy7378 30 AIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsT 48 (90)
+++.+.+.|||||.++.++
T Consensus 126 ~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 126 LFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhcCcCcEEEEEe
Confidence 4555667789999999987
No 141
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=74.48 E-value=3.1 Score=30.05 Aligned_cols=44 Identities=11% Similarity=0.001 Sum_probs=26.5
Q ss_pred HHHHHhhcCCCCCEEEEEcC--CCCccc----------------------CHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTC--SILPEE----------------------NEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTC--S~~~eE----------------------NE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.... .+ +.. +.+.+..++++.||+++.+
T Consensus 269 ~l~~~~~~L~pgG~l~i~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 336 (374)
T 1qzz_A 269 ILRGCVRALEPGGRLLVLDRADVE-GDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE 336 (374)
T ss_dssp HHHHHHHHEEEEEEEEEEECCH--------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEechhhc-CCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 34445566799999988765 32 211 3455566677777776654
No 142
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=74.40 E-value=1.2 Score=29.29 Aligned_cols=39 Identities=3% Similarity=-0.004 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
.+++.+.+.|+|||.++........ +.+..+++ ++++..
T Consensus 146 ~~l~~~~~~L~~gG~l~~~~~~~~~----~~~~~~~~--g~~~~~ 184 (207)
T 1jsx_A 146 DMVSWCHHLPGEQGRFYALKGQMPE----DEIALLPE--EYQVES 184 (207)
T ss_dssp HHHHHHTTSEEEEEEEEEEESSCCH----HHHHTSCT--TEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEeCCCch----HHHHHHhc--CCceee
Confidence 4567778889999999997665433 33344333 665544
No 143
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=74.38 E-value=0.98 Score=29.74 Aligned_cols=22 Identities=18% Similarity=0.080 Sum_probs=16.6
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.+.|||||.++.++-..
T Consensus 114 ~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 114 VLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp HHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHHcCCCCEEEEEecCC
Confidence 4555667789999999987544
No 144
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=74.33 E-value=1 Score=31.74 Aligned_cols=22 Identities=9% Similarity=0.110 Sum_probs=17.3
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
++|+.+.++|||||.++.++.+
T Consensus 153 ~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 153 ATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEEEec
Confidence 4567777889999999987644
No 145
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=74.22 E-value=7.8 Score=28.27 Aligned_cols=45 Identities=11% Similarity=0.082 Sum_probs=29.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcc--------------------cCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPE--------------------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~e--------------------ENE~vV~~~l~~~~~~l~~~ 74 (90)
+|+.+.+.|||||.++......... -.++....++++.||+++.+
T Consensus 289 ~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 353 (369)
T 3gwz_A 289 ILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERS 353 (369)
T ss_dssp HHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEE
Confidence 4556677889999999866544332 12444556667677777665
No 146
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=74.17 E-value=3.1 Score=32.57 Aligned_cols=48 Identities=25% Similarity=0.288 Sum_probs=32.3
Q ss_pred HHHHHHHHhhcCC-CCCEEEEEcCCCCcccC--HHHHHHHHhcCCcEEeec
Q psy7378 27 ILEAIDCLNARSP-TGGYLVYSTCSILPEEN--EAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 27 l~~al~~~~~~lk-pgG~lvYsTCS~~~eEN--E~vV~~~l~~~~~~l~~~ 74 (90)
|.++++.+....+ |..+.||+||...-.=. +.+++.+-+++++.++++
T Consensus 131 L~~~I~~~~~~~~~P~~I~V~tTC~~e~IGdDl~~v~~~~~~~~~~pVi~v 181 (492)
T 3u7q_A 131 LAKLIDEVETLFPLNKGISVQSECPIGLIGDDIESVSKVKGAELSKTIVPV 181 (492)
T ss_dssp HHHHHHHHHHHCTTCCCEEEEECTHHHHTTCCHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEECCcHHHHHhcCHHHHHHHHHHhhCCcEEEe
Confidence 3455666666779 99999999998654433 555555555556666665
No 147
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=74.10 E-value=1.9 Score=32.99 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC
Q psy7378 14 RALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR 67 (90)
Q Consensus 14 ~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~ 67 (90)
+.|+=.....++-|+++|+.+..+|+|||+|+-. ||+.-|+. +|+++++..
T Consensus 240 QALRI~VN~EL~~L~~~L~~a~~~L~~gGRl~VI--SFHSLEDR-iVK~~f~~~ 290 (347)
T 3tka_A 240 QAVRIWVNSELEEIEQALKSSLNVLAPGGRLSII--SFHSLEDR-IVKRFMREN 290 (347)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHEEEEEEEEEE--ESSHHHHH-HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEE--ecCchhHH-HHHHHHHHh
Confidence 3343334445677888899999999999999864 68888875 557777654
No 148
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=74.07 E-value=1.3 Score=28.44 Aligned_cols=19 Identities=11% Similarity=-0.081 Sum_probs=15.9
Q ss_pred hhcCCCCCEEEEEcCCCCc
Q psy7378 35 NARSPTGGYLVYSTCSILP 53 (90)
Q Consensus 35 ~~~lkpgG~lvYsTCS~~~ 53 (90)
.++|||||.++.++++-..
T Consensus 125 ~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 125 KNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp TTCEEEEEEEEEEEETTCC
T ss_pred CCCcCCCcEEEEEECCccc
Confidence 3889999999999887654
No 149
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=74.01 E-value=1 Score=32.00 Aligned_cols=25 Identities=12% Similarity=0.011 Sum_probs=18.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcc
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPE 54 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~e 54 (90)
+++.+.+.|||||+++..+.+....
T Consensus 117 ~~~e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 117 FWAELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp HHHHHHHHEEEEEEEEEEEECCCBC
T ss_pred HHHHHHHHcCCCCEEEEEECCCCCC
Confidence 3455567789999999888776543
No 150
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=73.78 E-value=0.95 Score=31.10 Aligned_cols=21 Identities=14% Similarity=0.159 Sum_probs=15.8
Q ss_pred HHHHHhhcCCCCCEEEEEcCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS 50 (90)
.++.+.+.|||||.++.+|-.
T Consensus 132 ~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 132 FAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp HHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHcCCCcEEEEEeCC
Confidence 345566778999999998753
No 151
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=73.43 E-value=8.7 Score=27.19 Aligned_cols=45 Identities=11% Similarity=0.030 Sum_probs=27.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcc---------------------cCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPE---------------------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~e---------------------ENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.....+... -++.....++++.||+.+.+
T Consensus 254 ~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 254 LLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp HHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEE
Confidence 4555566789999998875443221 13445556666667766554
No 152
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=73.24 E-value=3.3 Score=31.76 Aligned_cols=48 Identities=10% Similarity=-0.002 Sum_probs=32.5
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccC--HHHHHHHHhcC----CcEEeecC
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEEN--EAVVNYALRKR----DVKLVPTG 75 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eEN--E~vV~~~l~~~----~~~l~~~~ 75 (90)
.++++.+.+..+|.-+.||+||...-.=. +.+++.+-+++ ++.++++.
T Consensus 85 ~~aI~~~~~~~~P~~I~V~tTC~~e~IGdDi~~v~~~~~~~~~~~~~~pvi~v~ 138 (458)
T 1mio_B 85 KTAVKNIFSLYNPDIIAVHTTCLSETLGDDLPTYISQMEDAGSIPEGKLVIHTN 138 (458)
T ss_dssp HHHHHHHHHHTCCSEEEEEECHHHHHHTCCHHHHHHHHHHTTCSCTTCEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEECCcHHHHHhcCHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 44555555666999999999998765433 55666665555 57776653
No 153
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=73.20 E-value=6.4 Score=25.39 Aligned_cols=32 Identities=19% Similarity=0.020 Sum_probs=23.2
Q ss_pred CCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeec
Q psy7378 40 TGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 40 pgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~ 74 (90)
|||.++.++.+. .....+...+++.+++...+
T Consensus 115 pgG~l~~~~~~~---~~~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 115 TVGMLYLLVIEA---NRPKEVLARLEERGYGTRIL 146 (170)
T ss_dssp CSSEEEEEEEGG---GCHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEEEecC---CCHHHHHHHHHHCCCcEEEE
Confidence 999999977554 45566777777777776554
No 154
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=73.12 E-value=1.3 Score=33.77 Aligned_cols=48 Identities=8% Similarity=-0.020 Sum_probs=30.0
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcc-cC-HHHHHHHHhcCCcEEeecC
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPE-EN-EAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~e-EN-E~vV~~~l~~~~~~l~~~~ 75 (90)
.+++..+.+..+|..+.||+||...-. ++ +.+++.+-+++++.++++.
T Consensus 86 ~~~i~~~~~~~~P~~I~v~~TC~~~iIGdDi~~v~~~~~~~~~ipVi~v~ 135 (460)
T 2xdq_A 86 KRLCLEIKRDRNPSVIVWIGTCTTEIIKMDLEGLAPKLEAEIGIPIVVAR 135 (460)
T ss_dssp HHHHHHHHHHHCCSEEEEEECHHHHHTTCCHHHHHHHHHHHHSSCEEEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCCHHHHHhhCHHHHHHHHhhccCCcEEEEe
Confidence 344444555558999999999986543 23 4445554445576666653
No 155
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=73.02 E-value=1.5 Score=32.49 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=15.3
Q ss_pred HHHHHhhcCCCCCEEEEEcC
Q psy7378 30 AIDCLNARSPTGGYLVYSTC 49 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTC 49 (90)
+|+.+.++|||||.++.++-
T Consensus 185 ~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 185 LFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEe
Confidence 45556677899999999763
No 156
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=73.00 E-value=7.4 Score=27.89 Aligned_cols=44 Identities=7% Similarity=-0.075 Sum_probs=34.5
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 25 IVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 25 ~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
+++.++++.+...|+++|.+|-+.- .+...+...|.+++|.+.+
T Consensus 102 ~lI~~IL~~~~~~L~~~~~lIlq~~-----~~~~~lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 102 TLIRTILEEGAAKLAGVTKLILQPN-----IAAWQLREWSEQNNWLITS 145 (244)
T ss_dssp HHHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcC-----CChHHHHHHHHHCCCEEEE
Confidence 4677788888888999999998753 3778888888888887744
No 157
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=72.81 E-value=2 Score=27.95 Aligned_cols=19 Identities=16% Similarity=0.083 Sum_probs=14.7
Q ss_pred HHHHHhhcCCCCCEEEEEc
Q psy7378 30 AIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsT 48 (90)
+++.+.+.|||||.++.++
T Consensus 130 ~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 130 AFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhCCCCCEEEEEe
Confidence 4555667789999999975
No 158
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=72.76 E-value=1.1 Score=28.95 Aligned_cols=40 Identities=13% Similarity=0.064 Sum_probs=23.4
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCc------ccCHHHHHHHHhcCCc
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILP------EENEAVVNYALRKRDV 69 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~------eENE~vV~~~l~~~~~ 69 (90)
+++.+.+.|||||.++...-.... .-....+...++..||
T Consensus 83 ~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 83 ILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp HHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 455666778999999984311110 0124455566666676
No 159
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=72.41 E-value=1.5 Score=31.98 Aligned_cols=28 Identities=21% Similarity=0.165 Sum_probs=22.8
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCCcc
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSILPE 54 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~~e 54 (90)
...+++.+.+.|||||.++..+.+..+.
T Consensus 282 ~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 309 (343)
T 2pjd_A 282 AQTLIRGAVRHLNSGGELRIVANAFLPY 309 (343)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEEETTSSH
T ss_pred HHHHHHHHHHhCCCCcEEEEEEcCCCCc
Confidence 3456777788899999999999887764
No 160
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=72.32 E-value=1.8 Score=32.16 Aligned_cols=55 Identities=25% Similarity=0.282 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEe
Q psy7378 15 ALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLV 72 (90)
Q Consensus 15 ~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~ 72 (90)
.|+=......+-|+++|+.+..+|+|||+|+- =|++.-|+. +|+++++..+++++
T Consensus 200 AlRI~VN~EL~~L~~~L~~a~~~L~~gGrl~v--isfHSLEDR-iVK~~~~~~~~~~~ 254 (285)
T 1wg8_A 200 ALRIYVNDELNALKEFLEQAAEVLAPGGRLVV--IAFHSLEDR-VVKRFLRESGLKVL 254 (285)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHEEEEEEEEE--EECSHHHHH-HHHHHHHHHCSEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE--EecCcHHHH-HHHHHHHhCCcccc
Confidence 33333444556778888889999999999964 468888875 45666654345543
No 161
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=72.31 E-value=1.1 Score=29.56 Aligned_cols=21 Identities=5% Similarity=0.021 Sum_probs=16.4
Q ss_pred HHHHHhhcCCCCCEEEEEcCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS 50 (90)
+++.+.+.|||||.++..++.
T Consensus 124 ~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 124 VFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHcCCCcEEEEEecC
Confidence 455566778999999998775
No 162
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=71.96 E-value=5.1 Score=28.93 Aligned_cols=22 Identities=14% Similarity=-0.002 Sum_probs=16.4
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
++|+.+.+.|||||.++.....
T Consensus 276 ~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 276 IMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp HHHHHHHTTCCTTCEEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEEecc
Confidence 4566677889999999776533
No 163
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=71.75 E-value=0.44 Score=32.32 Aligned_cols=40 Identities=18% Similarity=0.108 Sum_probs=24.1
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
+++.+.+.|||||.++...-.. +...+...+.+.+++...
T Consensus 124 ~l~~~~~~LkpgG~l~~~~~~~----~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 124 VILRLPELAAPDAHFLYVGPRL----NVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp GGGGHHHHEEEEEEEEEEESSS----CCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCcEEEEeCCcC----CHHHHHHHHHHCCCeEEE
Confidence 3455567789999999332222 334566667766655543
No 164
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=71.26 E-value=1.6 Score=32.84 Aligned_cols=27 Identities=22% Similarity=0.302 Sum_probs=20.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCccc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEE 55 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eE 55 (90)
.+++.+.+.|||||.++.++++..+.+
T Consensus 321 ~~l~~~~~~LkpGG~l~iv~n~~l~~~ 347 (381)
T 3dmg_A 321 AFVNVAAARLRPGGVFFLVSNPFLKYE 347 (381)
T ss_dssp HHHHHHHHHEEEEEEEEEEECTTSCHH
T ss_pred HHHHHHHHhcCcCcEEEEEEcCCCChH
Confidence 445566677899999999998887643
No 165
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=71.24 E-value=1.7 Score=30.95 Aligned_cols=19 Identities=16% Similarity=0.310 Sum_probs=14.8
Q ss_pred HHHHHhhcCCCCCEEEEEc
Q psy7378 30 AIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsT 48 (90)
++.++.+.|||||.++-+.
T Consensus 164 ~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 164 VVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhccCCCEEEEEE
Confidence 4566667789999999864
No 166
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=70.98 E-value=2.9 Score=30.62 Aligned_cols=50 Identities=20% Similarity=0.214 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhc
Q psy7378 14 RALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRK 66 (90)
Q Consensus 14 ~~l~~l~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~ 66 (90)
+.++-...-.++-|+++|+.+..+|+|||+|+- =|++.-|+. +|+++++.
T Consensus 211 QalRi~vn~el~~l~~~l~~~~~~l~~ggr~~v--isfhsledr-~vk~~~~~ 260 (301)
T 1m6y_A 211 QAIRIYVNRELENLKEFLKKAEDLLNPGGRIVV--ISFHSLEDR-IVKETFRN 260 (301)
T ss_dssp HHHHHHHHTHHHHHHHHHHHGGGGEEEEEEEEE--EESSHHHHH-HHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhhCCCCEEEE--EecCcHHHH-HHHHHhhc
Confidence 344444455567788899999999999999965 467777764 55777764
No 167
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=70.89 E-value=1.5 Score=28.29 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=14.5
Q ss_pred HHHHHHhhcCCCCCEEEEEc
Q psy7378 29 EAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsT 48 (90)
.+++.+.+.|||||.++..+
T Consensus 117 ~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 117 GLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp HHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEE
Confidence 34566677889999977654
No 168
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=70.76 E-value=1.3 Score=30.00 Aligned_cols=18 Identities=22% Similarity=0.193 Sum_probs=14.0
Q ss_pred HHHHHhhcCCCCCEEEEE
Q psy7378 30 AIDCLNARSPTGGYLVYS 47 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYs 47 (90)
+++.+.+.|||||.++.+
T Consensus 160 ~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 160 LIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhCCCCcEEEEE
Confidence 455566778999999986
No 169
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=70.72 E-value=4 Score=30.08 Aligned_cols=46 Identities=13% Similarity=0.096 Sum_probs=30.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC---------CC-------cccCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS---------IL-------PEENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS---------~~-------~eENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.++|||||.++..+-. +. ..=....+..++++.|++++..
T Consensus 189 ~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 189 SVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 3556667778999999997532 11 1123467788888888877665
No 170
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=70.64 E-value=2.6 Score=28.39 Aligned_cols=22 Identities=9% Similarity=-0.081 Sum_probs=15.8
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.+.|||||.++.+..+.
T Consensus 145 ~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 145 LGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp HHHHHHHHHTTTCEEEEEEECT
T ss_pred HHHHHHHHcCCCCEEEEEeCCc
Confidence 4555566679999988877654
No 171
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=70.57 E-value=3 Score=29.83 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=25.5
Q ss_pred HHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeecC
Q psy7378 31 IDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~~ 75 (90)
|+.+.++|||||+++--|++ ..|...|...||++...+
T Consensus 196 l~~l~~~L~pGG~l~tysaa-------~~vrr~L~~aGF~v~~~~ 233 (257)
T 2qy6_A 196 FNAMARLARPGGTLATFTSA-------GFVRRGLQEAGFTMQKRK 233 (257)
T ss_dssp HHHHHHHEEEEEEEEESCCB-------HHHHHHHHHHTEEEEEEC
T ss_pred HHHHHHHcCCCcEEEEEeCC-------HHHHHHHHHCCCEEEeCC
Confidence 44455667999999832221 367777877788887653
No 172
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=69.35 E-value=1.4 Score=30.31 Aligned_cols=19 Identities=16% Similarity=0.062 Sum_probs=14.3
Q ss_pred HHHHHhhcCCCCCEEEEEc
Q psy7378 30 AIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsT 48 (90)
+++.+.++|||||.++.+|
T Consensus 155 ~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 155 LLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEe
Confidence 3455566789999999966
No 173
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=68.85 E-value=3.9 Score=28.96 Aligned_cols=22 Identities=14% Similarity=0.258 Sum_probs=16.9
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+|+.+.+.|||||.|+.++...
T Consensus 178 ~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 178 VVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHHHSCTTCEEEEEEEBC
T ss_pred HHHHHHHhCCCCcEEEEEEecC
Confidence 4555666789999999988665
No 174
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=68.76 E-value=4.5 Score=29.07 Aligned_cols=41 Identities=15% Similarity=-0.024 Sum_probs=23.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC-CcccCHHHHHHHHhcCCc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI-LPEENEAVVNYALRKRDV 69 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~-~~eENE~vV~~~l~~~~~ 69 (90)
.+++.+.+.|||||+++..+-+. ...+....+...+++.||
T Consensus 191 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF 232 (304)
T 3bwc_A 191 AFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGF 232 (304)
T ss_dssp HHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCC
Confidence 34556667789999999876553 222333334444544444
No 175
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=68.49 E-value=1.7 Score=27.24 Aligned_cols=21 Identities=19% Similarity=0.091 Sum_probs=16.5
Q ss_pred hhcCCCCCEEEEEcCCCCccc
Q psy7378 35 NARSPTGGYLVYSTCSILPEE 55 (90)
Q Consensus 35 ~~~lkpgG~lvYsTCS~~~eE 55 (90)
.++|||||.++.++.+.....
T Consensus 134 ~~~L~~gG~~~~~~~~~~~~~ 154 (171)
T 1ws6_A 134 SGLVEAGGLYVLQHPKDLYLP 154 (171)
T ss_dssp HTCEEEEEEEEEEEETTSCCT
T ss_pred hcccCCCcEEEEEeCCccCCc
Confidence 378899999999888765543
No 176
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=68.49 E-value=5.6 Score=28.53 Aligned_cols=45 Identities=4% Similarity=0.008 Sum_probs=27.7
Q ss_pred HHHHHhhcCCCCCEEEEEcCC-CCcc---------------------cCHHHHHHHHhcCCcEEeec
Q psy7378 30 AIDCLNARSPTGGYLVYSTCS-ILPE---------------------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS-~~~e---------------------ENE~vV~~~l~~~~~~l~~~ 74 (90)
+++.+.+.|||||.++.+... +... -+++.+..++++.||+++.+
T Consensus 270 ~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (360)
T 1tw3_A 270 ILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEV 336 (360)
T ss_dssp HHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEE
Confidence 445556778999999987655 3211 13445556666677776654
No 177
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=68.41 E-value=2.2 Score=29.80 Aligned_cols=22 Identities=23% Similarity=0.194 Sum_probs=17.1
Q ss_pred HHHHHHHHhhcCCCCCEEEEEc
Q psy7378 27 ILEAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsT 48 (90)
+..+++.+.++|||||.++...
T Consensus 149 ~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 149 FEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEE
Confidence 4456777788899999998853
No 178
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=68.34 E-value=1.7 Score=29.52 Aligned_cols=23 Identities=13% Similarity=0.083 Sum_probs=17.3
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.+++.+.++|||||.++..++..
T Consensus 162 ~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 162 NYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHHHHHcCCCeEEEEEcccc
Confidence 34556667789999999988654
No 179
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=68.19 E-value=2.9 Score=30.31 Aligned_cols=24 Identities=13% Similarity=0.080 Sum_probs=18.0
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
..++.+.+.|||||+++.-++|..
T Consensus 179 ~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 179 AFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEECS
T ss_pred HHHHHHHHhcCCCCEEEEecCCcc
Confidence 345666778899999999876643
No 180
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=68.18 E-value=1.7 Score=29.86 Aligned_cols=20 Identities=5% Similarity=0.122 Sum_probs=15.8
Q ss_pred HHHHHHhhcCCCCCEEEEEc
Q psy7378 29 EAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsT 48 (90)
.+|+.+.+.|||||.++.++
T Consensus 120 ~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 120 DILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp HHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEE
Confidence 35667788999999999844
No 181
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=68.15 E-value=1.8 Score=30.67 Aligned_cols=22 Identities=23% Similarity=0.335 Sum_probs=17.7
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+++.+.+.|||||.++.+|..
T Consensus 136 ~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 136 MMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCcEEEEecCC
Confidence 4566677889999999998764
No 182
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=67.81 E-value=2.8 Score=32.68 Aligned_cols=46 Identities=22% Similarity=0.268 Sum_probs=30.0
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccC--HHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEEN--EAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eEN--E~vV~~~l~~~~~~l~~~ 74 (90)
++++.+....+|..+.||+||...-.=. +.+++.+-++.++.++++
T Consensus 112 ~~I~~~~~~~~P~~I~V~tTC~~e~IGdDl~~v~~~~~~~~~~pVi~v 159 (483)
T 3pdi_A 112 HAIRQAVESYSPPAVFVYNTCVPALIGDDVDAVCKAAAERFGTPVIPV 159 (483)
T ss_dssp HHHHHHHHHHCCSCEEEECCHHHHHTTCCHHHHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHhcCCCEEEEECCchHHHhcCCHHHHHHHHHHHhCCCEEEE
Confidence 4445555556899999999998655433 555555544556666665
No 183
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=67.77 E-value=3.8 Score=27.44 Aligned_cols=22 Identities=5% Similarity=0.004 Sum_probs=16.1
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.++|||||.++..+-+.
T Consensus 172 ~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 172 YLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp GHHHHHHHBCTTCEEEEEESSH
T ss_pred HHHHHHHHcCCCCEEEEEeCCH
Confidence 3455567789999999977543
No 184
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=67.49 E-value=1.4 Score=30.23 Aligned_cols=23 Identities=13% Similarity=0.156 Sum_probs=17.7
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.+++.+.+.|||||.++.++.+.
T Consensus 133 ~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 133 KAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHcCCCeEEEEEeCCh
Confidence 35566677789999999988764
No 185
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=67.49 E-value=2.4 Score=31.10 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=22.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC--CcccCHHHHHHHHh
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI--LPEENEAVVNYALR 65 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~--~~eENE~vV~~~l~ 65 (90)
.++.+.++|+|||.+++.+++- .....+...+.+++
T Consensus 146 fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~ 183 (421)
T 2ih2_A 146 FLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAR 183 (421)
T ss_dssp HHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHh
Confidence 3445556679999999998762 23334454444444
No 186
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=67.48 E-value=1.9 Score=28.72 Aligned_cols=22 Identities=9% Similarity=-0.035 Sum_probs=16.4
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.++|||||.++...+..
T Consensus 156 ~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 156 YYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHHHhcCCCcEEEEeCCCc
Confidence 4556667889999998866553
No 187
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=67.34 E-value=3.9 Score=31.89 Aligned_cols=45 Identities=16% Similarity=0.131 Sum_probs=28.0
Q ss_pred HHHHhhcCCCCCEEEEEcC-CCCcccCHH-HHHHHHhcCCcEEeecC
Q psy7378 31 IDCLNARSPTGGYLVYSTC-SILPEENEA-VVNYALRKRDVKLVPTG 75 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTC-S~~~eENE~-vV~~~l~~~~~~l~~~~ 75 (90)
+..+.+..+|..+.||+|| |=.--++-+ +++.+-++.++.++++.
T Consensus 80 I~~~~~~~~P~~I~V~tTC~~e~IGdDi~~v~~~~~~~~g~pVi~v~ 126 (511)
T 2xdq_B 80 IIRKDTEEHPDLIVLTPTCTSSILQEDLQNFVRRASLSTTADVLLAD 126 (511)
T ss_dssp HHHHHHHHCCSEEEEECCHHHHTTCCCHHHHHHHHHHHCSSEEEECC
T ss_pred HHHHHHhcCCCEEEEeCCcHHHHhccCHHHHHHHhhhccCCCEEEee
Confidence 3334444589999999999 444445544 44444344577777764
No 188
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=66.90 E-value=1.8 Score=30.51 Aligned_cols=45 Identities=9% Similarity=-0.068 Sum_probs=26.0
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcc--------cCHHHHHHHHhcCCcEEeec
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPE--------ENEAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~e--------ENE~vV~~~l~~~~~~l~~~ 74 (90)
.+++.+.++|||||+++..|....+. -.++.+...+.. +|+++..
T Consensus 172 ~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~ 224 (252)
T 2gb4_A 172 RYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCL 224 (252)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEE
Confidence 34566678889999998666432211 124455666654 3555443
No 189
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=66.61 E-value=3.3 Score=29.43 Aligned_cols=22 Identities=14% Similarity=0.009 Sum_probs=16.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.++.+.+.|||||+++..+.+.
T Consensus 171 ~~~~~~~~L~pgG~lv~~~~~~ 192 (275)
T 1iy9_A 171 FYAGIAKALKEDGIFVAQTDNP 192 (275)
T ss_dssp HHHHHHHHEEEEEEEEEECCCT
T ss_pred HHHHHHHhcCCCcEEEEEcCCc
Confidence 3445556789999999987664
No 190
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=66.47 E-value=6 Score=27.82 Aligned_cols=45 Identities=9% Similarity=0.036 Sum_probs=24.0
Q ss_pred HHHHHHhhcCC---C--CCEEEEEcCCCCc---ccCHHHHHHHHhcCC-cEEeec
Q psy7378 29 EAIDCLNARSP---T--GGYLVYSTCSILP---EENEAVVNYALRKRD-VKLVPT 74 (90)
Q Consensus 29 ~al~~~~~~lk---p--gG~lvYsTCS~~~---eENE~vV~~~l~~~~-~~l~~~ 74 (90)
.+++.+.++|| | ||+++.+.+...+ +..+... ..+++.+ +++..+
T Consensus 181 ~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~-~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 181 ALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFF-RLVNADGALIAEPW 234 (281)
T ss_dssp HHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHH-HHHHHSTTEEEEEE
T ss_pred HHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHH-HHHHhcCCEEEEEe
Confidence 34555567789 9 9976554343322 1223333 3456678 877665
No 191
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=64.41 E-value=1.9 Score=28.79 Aligned_cols=18 Identities=0% Similarity=-0.223 Sum_probs=14.9
Q ss_pred hcCCCCCEEEEEcCCCCc
Q psy7378 36 ARSPTGGYLVYSTCSILP 53 (90)
Q Consensus 36 ~~lkpgG~lvYsTCS~~~ 53 (90)
++|||||.+++++|+...
T Consensus 148 ~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 148 GWLADEALIYVESEVENG 165 (202)
T ss_dssp TCEEEEEEEEEEEEGGGC
T ss_pred CccCCCcEEEEEECCCcc
Confidence 468999999999987654
No 192
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=64.12 E-value=2 Score=30.43 Aligned_cols=20 Identities=30% Similarity=0.283 Sum_probs=14.3
Q ss_pred HHHHhhcCCCCCEEEEEcCC
Q psy7378 31 IDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS 50 (90)
|+.+.+.|||||.+|.+.-.
T Consensus 161 l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 161 LDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp HHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHHHcCCCcEEEEEecc
Confidence 44455667999999987543
No 193
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=64.07 E-value=4.2 Score=28.87 Aligned_cols=23 Identities=22% Similarity=0.185 Sum_probs=17.9
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.++.+.+.|||||+++..+.+..
T Consensus 153 ~~~~~~~~L~pgG~lv~~~~~~~ 175 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVAKHPL 175 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEEECTT
T ss_pred HHHHHHHhcCCCcEEEEEcCCcc
Confidence 45667788999999999876653
No 194
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=63.38 E-value=2.6 Score=29.85 Aligned_cols=23 Identities=17% Similarity=0.222 Sum_probs=17.5
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcC
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTC 49 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTC 49 (90)
+.++++.+.++|||||.+|..+.
T Consensus 199 ~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 199 LKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHHHHHhCCCcEEEEecC
Confidence 34566777788899999998754
No 195
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=63.27 E-value=3.5 Score=32.66 Aligned_cols=49 Identities=18% Similarity=0.141 Sum_probs=31.8
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCCccc-C-HHHHHHHHhcCCcEEeecC
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSILPEE-N-EAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~~eE-N-E~vV~~~l~~~~~~l~~~~ 75 (90)
|.+++..+....+|..+.||+||...-.= + +.+++.+-+++++.++++.
T Consensus 122 L~~aI~~~~~~~~P~~I~V~tTC~~eiIGdDi~~v~~~~~~~~~~pVi~v~ 172 (533)
T 1mio_A 122 LKDAIHEAYEMFHPAAIGVYATCPVGLIGDDILAVAATASKEIGIPVHAFS 172 (533)
T ss_dssp HHHHHHHHHHHTCCSEEEECCCHHHHHHTCCHHHHHHHHHHHHSSCEEECC
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCHHHHhcCCHHHHHHHHHHhhCCcEEEEe
Confidence 44556666677799999999999865432 2 4444454444566666653
No 196
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=62.76 E-value=9 Score=27.34 Aligned_cols=44 Identities=14% Similarity=0.102 Sum_probs=27.6
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCc-----------------------ccCHHHHHHHHhcCCcEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILP-----------------------EENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~-----------------------eENE~vV~~~l~~~~~~l~~ 73 (90)
+|+.+.+.|||||.++.....+.. +-.+.....++++.||+++.
T Consensus 269 ~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 269 VIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp HHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceee
Confidence 455566778999999886543322 12244556666667777765
No 197
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=62.71 E-value=2.4 Score=29.36 Aligned_cols=22 Identities=23% Similarity=0.261 Sum_probs=16.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.+.|||||.++.++...
T Consensus 136 ~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 136 AIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp HHHHHHHHEEEEEEEEEEEECT
T ss_pred HHHHHHHhcCCCcEEEEEecCC
Confidence 4555667789999999877543
No 198
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=62.65 E-value=5.4 Score=29.56 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=15.8
Q ss_pred HHHHHHhhcCCCCCEEEEEc
Q psy7378 29 EAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsT 48 (90)
++++.+.+.|||||+++...
T Consensus 203 ~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 203 RVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHHcCCCcEEEEEc
Confidence 35666677889999999876
No 199
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=62.57 E-value=3.4 Score=29.97 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=22.8
Q ss_pred HHHhhcCCCCCEEEEEc-CCCCcccCHHHHHHHHhcC
Q psy7378 32 DCLNARSPTGGYLVYST-CSILPEENEAVVNYALRKR 67 (90)
Q Consensus 32 ~~~~~~lkpgG~lvYsT-CS~~~eENE~vV~~~l~~~ 67 (90)
+.+.++|||||++++.+ .+++..+....+...+.+.
T Consensus 240 ~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 240 EQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp HHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 33446679999999987 3444445556666555444
No 200
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=62.34 E-value=1.8 Score=30.30 Aligned_cols=21 Identities=10% Similarity=-0.061 Sum_probs=15.4
Q ss_pred HHHHHhhcCCCCCEEEEEcCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS 50 (90)
+++.+.+.|||||.++..+++
T Consensus 131 ~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 131 FQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp HHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEecC
Confidence 455566778999999885544
No 201
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=62.26 E-value=5 Score=29.12 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=23.3
Q ss_pred HhhcCCCCCEEEE-EcC--CCCcccCHHHHHHHHhcCCcEE
Q psy7378 34 LNARSPTGGYLVY-STC--SILPEENEAVVNYALRKRDVKL 71 (90)
Q Consensus 34 ~~~~lkpgG~lvY-sTC--S~~~eENE~vV~~~l~~~~~~l 71 (90)
|.++|||||.|.| ..+ ...+.+-.+.++.+.+..++++
T Consensus 211 a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 211 ALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp HHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred HHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcE
Confidence 4456799999855 333 2333445677777777666544
No 202
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=61.71 E-value=2.5 Score=28.74 Aligned_cols=20 Identities=15% Similarity=0.086 Sum_probs=14.8
Q ss_pred HHHHHhhcCCCCCEEEEEcC
Q psy7378 30 AIDCLNARSPTGGYLVYSTC 49 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTC 49 (90)
+|+.+.+.|||||.++.++.
T Consensus 122 ~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 122 FVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp HHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEEc
Confidence 45556677899999998643
No 203
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=61.19 E-value=2.6 Score=28.38 Aligned_cols=20 Identities=10% Similarity=0.179 Sum_probs=14.9
Q ss_pred HHHHHHhhcCCCCCEEEEEc
Q psy7378 29 EAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsT 48 (90)
++++.+.+.|||||.++..+
T Consensus 126 ~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 126 KLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeEEEEec
Confidence 34556667789999999754
No 204
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=60.65 E-value=3 Score=28.90 Aligned_cols=19 Identities=21% Similarity=0.440 Sum_probs=13.8
Q ss_pred HHHHHHhhcCCCCCEEEEE
Q psy7378 29 EAIDCLNARSPTGGYLVYS 47 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYs 47 (90)
.+++.+.+.|||||.++..
T Consensus 204 ~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 204 SIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp HHHHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEE
Confidence 3556667788999997663
No 205
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=60.58 E-value=1.8 Score=29.85 Aligned_cols=22 Identities=18% Similarity=0.372 Sum_probs=16.6
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+++.+.+.|||||.++.++++.
T Consensus 185 ~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 185 VLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp GHHHHHHHEEEEEEEEEEESSH
T ss_pred HHHHHHHhCCCCCEEEEEeCCH
Confidence 3455566789999999988764
No 206
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=59.81 E-value=3.8 Score=28.46 Aligned_cols=20 Identities=10% Similarity=-0.091 Sum_probs=15.7
Q ss_pred HHHHHHhhcCCCCCEEEEEc
Q psy7378 29 EAIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsT 48 (90)
.++..+.+.|||||.++..+
T Consensus 118 ~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 118 LILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GTHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHhccCCCEEEEEE
Confidence 45666778889999999864
No 207
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=59.45 E-value=6.3 Score=29.96 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=31.1
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeecC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTG 75 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~~ 75 (90)
+++.|...|+|||.+|--.=-...-+-|.++..+.+.+ .++...+.
T Consensus 236 al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vKP~ 282 (320)
T 2hwk_A 236 LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCKPK 282 (320)
T ss_dssp THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECCT
T ss_pred HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeCCC
Confidence 67788889999999987655554334466666655555 46666653
No 208
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=59.38 E-value=3.2 Score=27.61 Aligned_cols=21 Identities=14% Similarity=-0.015 Sum_probs=16.1
Q ss_pred HHHHHhhcCCCCCEEEEEcCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS 50 (90)
.++.+.++|+|||.++...+.
T Consensus 161 ~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 161 YYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHHHHHHHEEEEEEEEEECCS
T ss_pred HHHHHHHHcCCCeEEEEECCC
Confidence 455566778999999997664
No 209
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=59.38 E-value=1.4 Score=32.32 Aligned_cols=24 Identities=21% Similarity=0.285 Sum_probs=17.1
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
..+++.+.++|||||.++-+.|++
T Consensus 151 ~~~l~~~~~~LkpgG~lip~~~~~ 174 (340)
T 2fyt_A 151 DSVLYAKNKYLAKGGSVYPDICTI 174 (340)
T ss_dssp HHHHHHHHHHEEEEEEEESCEEEE
T ss_pred HHHHHHHHhhcCCCcEEEcccceE
Confidence 345566677889999999655554
No 210
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=58.89 E-value=6.2 Score=31.00 Aligned_cols=46 Identities=22% Similarity=0.283 Sum_probs=27.7
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCCccc-C-HHHHHHHHhcCCcEEeec
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSILPEE-N-EAVVNYALRKRDVKLVPT 74 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~~eE-N-E~vV~~~l~~~~~~l~~~ 74 (90)
|.++++.+.+..+|..+.||+||...-.= + +.+++. ++. ++.++++
T Consensus 73 L~~aI~~~~~~~~P~~I~V~tTC~~elIGdDi~~v~~~-~~~-~~pVi~v 120 (525)
T 3aek_B 73 LKDALAAAHARYKPQAMAVALTCTAELLQDDPNGISRA-LNL-PVPVVPL 120 (525)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECTTGGGSCCCHHHHHHH-HTC-SSCEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEECCcHHHHhcccHHHHHHH-hcC-CCCEEEE
Confidence 34455555555699999999999876543 3 333333 322 5555554
No 211
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=58.70 E-value=2.7 Score=30.49 Aligned_cols=23 Identities=26% Similarity=0.236 Sum_probs=17.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+.++.+.+.|||||+++..+.+.
T Consensus 176 ~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 176 EFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEEccCc
Confidence 34566677889999999876554
No 212
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=57.32 E-value=9.3 Score=24.83 Aligned_cols=29 Identities=14% Similarity=0.140 Sum_probs=19.7
Q ss_pred EEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 44 LVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 44 lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
.+|+.| +.+.++.+.+..++.+.++++..
T Consensus 143 ~~~~~~-~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 143 VVYSIH-LAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp EEEEEE-ECCHHHHHHHHHHHHHTTEEEEE
T ss_pred cEEEEE-eCCcCCHHHHHHHHHHCCCeEEE
Confidence 378888 33556777777888777765544
No 213
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=57.01 E-value=9.4 Score=29.07 Aligned_cols=46 Identities=7% Similarity=0.055 Sum_probs=30.4
Q ss_pred HHHHHHhhcCCCCC--EEEEEcCCCCccc-C-HHHHHHHHhcC--CcEEeecC
Q psy7378 29 EAIDCLNARSPTGG--YLVYSTCSILPEE-N-EAVVNYALRKR--DVKLVPTG 75 (90)
Q Consensus 29 ~al~~~~~~lkpgG--~lvYsTCS~~~eE-N-E~vV~~~l~~~--~~~l~~~~ 75 (90)
++++.+. ..+|.= +.||+||...-.= + +.+++.+-+++ ++.++++.
T Consensus 104 ~aI~~~~-~~~P~~~~I~V~tTC~~e~IGdDi~~v~~~~~~~~~~~~pVi~v~ 155 (437)
T 3aek_A 104 REVAKLL-ERRPDIRQLFLVGSCPSEVLKLDLDRAAERLSGLHAPHVRVYSYT 155 (437)
T ss_dssp HHHHHHH-HTCTTCCEEEEEECHHHHHTTCCHHHHHHHHHHHSTTTCEEEEEE
T ss_pred HHHHHHH-HhCCCccEEEEEcCCHHHHhhcCHHHHHHHHHHhcCCCCeEEEeE
Confidence 3444444 558877 9999999865432 2 56666666666 67777763
No 214
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=56.94 E-value=1.5 Score=31.86 Aligned_cols=23 Identities=22% Similarity=0.366 Sum_probs=17.0
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.++..+.++|||||.++.+++++
T Consensus 126 ~~l~~~~~~LkpgG~li~~~~~~ 148 (328)
T 1g6q_1 126 TVLYARDHYLVEGGLIFPDKCSI 148 (328)
T ss_dssp HHHHHHHHHEEEEEEEESCEEEE
T ss_pred HHHHHHHhhcCCCeEEEEeeceE
Confidence 34555567789999999776665
No 215
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=56.75 E-value=1.5 Score=32.16 Aligned_cols=25 Identities=4% Similarity=0.133 Sum_probs=18.4
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILP 53 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~ 53 (90)
.+++.+.++|||||.++.+.+++..
T Consensus 154 ~~l~~~~r~LkpgG~li~~~~~~~~ 178 (349)
T 3q7e_A 154 TVLHARDKWLAPDGLIFPDRATLYV 178 (349)
T ss_dssp HHHHHHHHHEEEEEEEESCEEEEEE
T ss_pred HHHHHHHHhCCCCCEEccccceEEE
Confidence 4555666788999999877776543
No 216
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=56.42 E-value=4 Score=28.44 Aligned_cols=21 Identities=10% Similarity=0.129 Sum_probs=16.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS 50 (90)
+++.+.+.|||||.++.....
T Consensus 108 ~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 108 MLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp HHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEEEecc
Confidence 455566778999999987766
No 217
>1g2y_A Hepatocyte nuclear factor 1-alpha; dimerization domain, four-helix bundle, transcription factor, selenomethionine; 1.00A {Synthetic} SCOP: a.34.2.1 PDB: 1g39_A 1f93_E 1g2z_A 1jb6_A 2gyp_A
Probab=55.92 E-value=11 Score=19.38 Aligned_cols=16 Identities=6% Similarity=0.198 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHH
Q psy7378 17 STIGKTSLIVILEAID 32 (90)
Q Consensus 17 ~~l~~~Q~~Ll~~al~ 32 (90)
.+|+.+|++||...|+
T Consensus 3 skLs~LQ~eLL~aLL~ 18 (32)
T 1g2y_A 3 SKLSQLQTEMLAALLE 18 (32)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 3688999999987765
No 218
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=55.27 E-value=6 Score=30.04 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCC
Q psy7378 20 GKTSLIVILEAIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 20 ~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~ 51 (90)
.+-|++ +...|++-++-|+|||++|.++..-
T Consensus 198 ~Qf~~D-~~~fL~~ra~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 198 RQFQAD-LAEFLRARAAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHHHH-HHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHhCCCCEEEEEEecC
Confidence 344455 5667888889999999999988754
No 219
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=54.81 E-value=12 Score=27.27 Aligned_cols=22 Identities=14% Similarity=0.200 Sum_probs=15.7
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+|+.+.+.|||||+|+.....+
T Consensus 282 ~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 282 LLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp HHHHHHHHSCTTCEEEEEECCC
T ss_pred HHHHHHHHcCCCCEEEEEEecc
Confidence 4455556679999998876554
No 220
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=54.75 E-value=1.4 Score=32.74 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=17.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.++..+.++|||||.++.+.+++.
T Consensus 150 ~~l~~~~~~LkpgG~li~~~~~~~ 173 (376)
T 3r0q_C 150 SVISARDRWLKPTGVMYPSHARMW 173 (376)
T ss_dssp HHHHHHHHHEEEEEEEESSEEEEE
T ss_pred HHHHHHHhhCCCCeEEEEecCeEE
Confidence 345555677899999998877643
No 221
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=54.52 E-value=6 Score=28.90 Aligned_cols=25 Identities=16% Similarity=0.073 Sum_probs=18.0
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.+.++.+.+.|+|||.++..+.+..
T Consensus 202 ~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 202 QSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp --HHHHHHHHEEEEEEEEEECCCTT
T ss_pred HHHHHHHHhhcCCCeEEEEECCCcc
Confidence 3456666778899999999876654
No 222
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=54.18 E-value=4.1 Score=27.39 Aligned_cols=18 Identities=17% Similarity=0.093 Sum_probs=13.8
Q ss_pred HHHHHhhcCCCCCEEEEE
Q psy7378 30 AIDCLNARSPTGGYLVYS 47 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYs 47 (90)
+++.+.+.|||||.++.+
T Consensus 123 ~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 123 VLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHCCCCcEEEEE
Confidence 455556778999999987
No 223
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=54.11 E-value=1.4 Score=31.09 Aligned_cols=24 Identities=8% Similarity=-0.054 Sum_probs=14.7
Q ss_pred HHHHhhcCCCCCEEEEEcCCCCccc
Q psy7378 31 IDCLNARSPTGGYLVYSTCSILPEE 55 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~~~eE 55 (90)
+..+.+.|||||.++ .+|.....+
T Consensus 202 l~~~~~~LkpgG~l~-~s~~~~~~~ 225 (272)
T 3a27_A 202 LDKTFEFLKDRGVIH-YHETVAEKI 225 (272)
T ss_dssp HHHHHHHEEEEEEEE-EEEEEEGGG
T ss_pred HHHHHHHcCCCCEEE-EEEcCcccc
Confidence 334445679999777 566655443
No 224
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=53.94 E-value=6.5 Score=28.70 Aligned_cols=41 Identities=20% Similarity=0.360 Sum_probs=29.6
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcE
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVK 70 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~ 70 (90)
..|+.+.++|+|||+||.=-....+.+ ..-|+.|++.+++.
T Consensus 225 ~~Le~~~p~L~pGGiIv~DD~~~~~G~-~~Av~Ef~~~~~i~ 265 (282)
T 2wk1_A 225 DTLTNLYPKVSVGGYVIVDDYMMCPPC-KDAVDEYRAKFDIA 265 (282)
T ss_dssp HHHHHHGGGEEEEEEEEESSCTTCHHH-HHHHHHHHHHTTCC
T ss_pred HHHHHHHhhcCCCEEEEEcCCCCCHHH-HHHHHHHHHhcCCc
Confidence 457778899999999998766434544 55667888877543
No 225
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=53.65 E-value=6 Score=28.62 Aligned_cols=23 Identities=9% Similarity=0.002 Sum_probs=17.0
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.++.+.+.|+|||+++..+.+..
T Consensus 191 ~l~~~~~~LkpgG~lv~~~~~~~ 213 (304)
T 2o07_A 191 YYQLMKTALKEDGVLCCQGECQW 213 (304)
T ss_dssp HHHHHHHHEEEEEEEEEEEECTT
T ss_pred HHHHHHhccCCCeEEEEecCCcc
Confidence 45556677899999998875543
No 226
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=53.55 E-value=4.2 Score=27.80 Aligned_cols=19 Identities=21% Similarity=0.295 Sum_probs=14.5
Q ss_pred HHHHHhhcCCCCCEEEEEc
Q psy7378 30 AIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsT 48 (90)
+++.+.++|||||.++..+
T Consensus 124 ~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 124 ALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEE
Confidence 4455567789999999976
No 227
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=53.45 E-value=16 Score=26.51 Aligned_cols=48 Identities=15% Similarity=0.070 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCCCccc-------CHHHHHHHHhcCCcEEee
Q psy7378 26 VILEAIDCLNARSPTGGYLVYSTCSILPEE-------NEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 26 Ll~~al~~~~~~lkpgG~lvYsTCS~~~eE-------NE~vV~~~l~~~~~~l~~ 73 (90)
.+...++.+.++|||||.++........+. +-..+..+++..++.+..
T Consensus 62 ~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 62 WFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHHhCCCEEEE
Confidence 344566677788999999988655432111 123343445566776643
No 228
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=52.01 E-value=12 Score=27.46 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=16.2
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
++..+...|+|||.|+.++-+-
T Consensus 182 ~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 182 IVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp HHHHHHTTSCTTCEEEEEEECC
T ss_pred HHHHHHHhCCCCcEEEEEeccC
Confidence 3444556789999999997654
No 229
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=51.32 E-value=3.8 Score=27.32 Aligned_cols=18 Identities=28% Similarity=0.383 Sum_probs=13.9
Q ss_pred HHHHhhcCCCCCEEEEEc
Q psy7378 31 IDCLNARSPTGGYLVYST 48 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsT 48 (90)
+..+.+.|||||.++.+.
T Consensus 161 l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 161 IDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhcCCCCEEEEEE
Confidence 445567789999999974
No 230
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=50.27 E-value=10 Score=29.27 Aligned_cols=48 Identities=17% Similarity=0.174 Sum_probs=28.7
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCCcccC--HHHHHHHHhcC----CcEEeec
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSILPEEN--EAVVNYALRKR----DVKLVPT 74 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~~eEN--E~vV~~~l~~~----~~~l~~~ 74 (90)
|.++++.+.+..+|..+.||+||...-.=. +.+++.+-+++ ++.++++
T Consensus 80 L~~~I~~~~~~~~P~~I~V~tTC~~e~IGdDi~~v~~~~~~~~~~~~~~pVi~v 133 (458)
T 3pdi_B 80 VVEALKTICERQNPSVIGLLTTGLSETQGCDLHTALHEFRTQYEEYKDVPIVPV 133 (458)
T ss_dssp HHHHHHHHHHHTCCSEEEEEECHHHHTTCTTHHHHHHHTTTSCCSCSCSCEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCcHHHHhcCCHHHHHHHHHHhccccCCCeEEEe
Confidence 344555556666999999999998544322 44444443332 4555554
No 231
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=49.50 E-value=3 Score=28.27 Aligned_cols=19 Identities=21% Similarity=0.380 Sum_probs=13.3
Q ss_pred HHHHHhhcCCCCCEEEEEc
Q psy7378 30 AIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsT 48 (90)
+++.+.+.|||||.++..+
T Consensus 176 ~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 176 VVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp GHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCEEEEEE
Confidence 3455566779999998643
No 232
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=48.69 E-value=14 Score=27.08 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=15.5
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~ 51 (90)
+|+.+.+.|||||+|+.....+
T Consensus 280 ~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 280 LLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp HHHHHHHHSCTTCEEEEEECCB
T ss_pred HHHHHHHHcCCCCEEEEEEecc
Confidence 4455566679999998866544
No 233
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=48.51 E-value=4.2 Score=27.78 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=15.0
Q ss_pred HHHHhhcCCCCCEEEEEcCC
Q psy7378 31 IDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS 50 (90)
++.+.++|||||.++.++-.
T Consensus 161 l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 161 AEELARVVKPGGWVITATPG 180 (269)
T ss_dssp HHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCcEEEEEEcC
Confidence 34456678999999998754
No 234
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=48.00 E-value=6.7 Score=28.95 Aligned_cols=25 Identities=12% Similarity=0.114 Sum_probs=18.0
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILP 53 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~ 53 (90)
++++.+.+.|+|||.++..+.+...
T Consensus 216 ~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 216 PFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred HHHHHHHHhcCCCcEEEEecCCccc
Confidence 3455566778999999998666543
No 235
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=46.92 E-value=15 Score=27.36 Aligned_cols=39 Identities=21% Similarity=0.209 Sum_probs=29.3
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeecC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~~ 75 (90)
+++.++++++|||+++==||+ ..|++.|+..||++...+
T Consensus 208 ~f~~l~~~~~pgg~laTYtaa-------g~VRR~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 208 FLSLIKERIDEKGYWVSYSSS-------LSVRKSLLTLGFKVGSSR 246 (308)
T ss_dssp HHHHHHTTEEEEEEEEESCCC-------HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCcEEEEEeCc-------HHHHHHHHHCCCEEEecC
Confidence 345566778999998733443 688999999999988764
No 236
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=46.89 E-value=5.7 Score=26.36 Aligned_cols=19 Identities=11% Similarity=0.064 Sum_probs=14.8
Q ss_pred HhhcCCCCCEEEEEcCCCC
Q psy7378 34 LNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 34 ~~~~lkpgG~lvYsTCS~~ 52 (90)
+.+.|||||.++.++.+-.
T Consensus 151 ~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 151 PYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp HHHTEEEEEEEEEEECSSS
T ss_pred HHHHcCCCcEEEEEEcCCC
Confidence 4567899999999876543
No 237
>3ahp_A CUTA1; thermostable protein, electron transport; 2.70A {Shewanella}
Probab=46.79 E-value=15 Score=23.31 Aligned_cols=48 Identities=15% Similarity=0.260 Sum_probs=28.7
Q ss_pred CCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeecCCCCCCCCccccCCC
Q psy7378 39 PTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVNYRQN 89 (90)
Q Consensus 39 kpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~~~~~g~dGf~~~~~~ 89 (90)
+++=.+||+||. +.++-+...+.++++.=.-++.+- .+...++.|.|.
T Consensus 3 ~~~~~~V~tT~p-~~~~A~~ia~~Lve~rLAACvni~--p~i~S~Y~W~G~ 50 (108)
T 3ahp_A 3 KPEQLLIFTTCP-DADIACRIATALVEAKLAACVQIG--QAVESIYQWDNN 50 (108)
T ss_dssp CCSEEEEEEEES-SHHHHHHHHHHHHHTTSCSEEEEC--SCEEEEEESSSS
T ss_pred cCcEEEEEEecC-CHHHHHHHHHHHHhCCeEEEEEec--CCccEEEEeCCE
Confidence 566689999984 555666777777765522222221 134567777774
No 238
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=46.79 E-value=5.8 Score=26.63 Aligned_cols=18 Identities=22% Similarity=0.106 Sum_probs=13.0
Q ss_pred HHHHhhcCCCCCEEEEEc
Q psy7378 31 IDCLNARSPTGGYLVYST 48 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsT 48 (90)
+..+.+.|||||.++.++
T Consensus 165 ~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 165 ALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEE
Confidence 344556779999999854
No 239
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=46.29 E-value=6.6 Score=29.30 Aligned_cols=26 Identities=15% Similarity=-0.017 Sum_probs=19.4
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcc
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPE 54 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~e 54 (90)
+.++.+.+.|||||.++.++-+..+.
T Consensus 315 ~~l~~~~~~LkpgG~l~iv~n~~~~~ 340 (375)
T 4dcm_A 315 EMFHHARRCLKINGELYIVANRHLDY 340 (375)
T ss_dssp HHHHHHHHHEEEEEEEEEEEETTSCH
T ss_pred HHHHHHHHhCCCCcEEEEEEECCcCH
Confidence 34566667789999999987666654
No 240
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=45.86 E-value=14 Score=29.05 Aligned_cols=18 Identities=28% Similarity=0.248 Sum_probs=13.1
Q ss_pred HHHHHhhcCCCCCEEEEE
Q psy7378 30 AIDCLNARSPTGGYLVYS 47 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYs 47 (90)
+|....+.|||||+||-+
T Consensus 270 aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 270 QLKERFANMKEGGRIVSS 287 (438)
T ss_dssp HHHHHHTTSCTTCEEEES
T ss_pred HHHHHHHcCCCCcEEEEe
Confidence 344455788999999954
No 241
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=45.84 E-value=21 Score=25.47 Aligned_cols=21 Identities=0% Similarity=-0.031 Sum_probs=15.1
Q ss_pred HHHHHhhcCCCCC--EEEEEcCC
Q psy7378 30 AIDCLNARSPTGG--YLVYSTCS 50 (90)
Q Consensus 30 al~~~~~~lkpgG--~lvYsTCS 50 (90)
+|+.+.+.||||| .++..+-+
T Consensus 173 ~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 173 VLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp HHHHHHHHHHHSTTCEEEEEESC
T ss_pred HHHHHHHHhccCCCcEEEEEeCC
Confidence 4555667789999 88876544
No 242
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=45.55 E-value=7.3 Score=30.43 Aligned_cols=22 Identities=18% Similarity=0.215 Sum_probs=18.0
Q ss_pred HHHHHHhhcCCCCCEEEEEcCC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS 50 (90)
++|+.+.+.|||||+++.....
T Consensus 305 ~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 305 TSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHHHHGGGEEEEEEEEEECGG
T ss_pred HHHHHHHHhcCCCeEEEEEecc
Confidence 4677788999999999997554
No 243
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=45.30 E-value=3.3 Score=30.22 Aligned_cols=23 Identities=4% Similarity=-0.057 Sum_probs=17.8
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
++..+.++|||||.++.+++++.
T Consensus 137 ~l~~~~~~LkpgG~li~~~~~~~ 159 (348)
T 2y1w_A 137 SYLHAKKYLKPSGNMFPTIGDVH 159 (348)
T ss_dssp HHHHGGGGEEEEEEEESCEEEEE
T ss_pred HHHHHHhhcCCCeEEEEecCcEE
Confidence 34456788999999998877764
No 244
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=45.25 E-value=34 Score=25.12 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=22.8
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
+++.+.+.| ||.++|.||+ ...+...+.+.+++...
T Consensus 313 ~~~~l~r~l--~g~~~~i~~~------~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 313 FFNELAKVL--EKRGVFITTE------KKAIEEAIAENGFEIIH 348 (373)
T ss_dssp HHHHHHHHE--EEEEEEEESC------HHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHc--CCeEEEEECC------HHHHHHHHHHcCCEEEE
Confidence 344444555 8889999984 45556666666766644
No 245
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=44.48 E-value=48 Score=24.41 Aligned_cols=44 Identities=7% Similarity=0.035 Sum_probs=27.2
Q ss_pred HHHHhhcCCCC-CEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeec
Q psy7378 31 IDCLNARSPTG-GYLVYSTCSILPEENEAVVNYALRKR-DVKLVPT 74 (90)
Q Consensus 31 l~~~~~~lkpg-G~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~ 74 (90)
|+.+.+.|||| |.+|...-..+-.+-.+.++.+-..+ .+.+..+
T Consensus 166 L~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~F~~V~~~KP 211 (277)
T 3evf_A 166 LDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNP 211 (277)
T ss_dssp HHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCCEEECCT
T ss_pred HHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHhcCCEEEEeC
Confidence 55566778999 99998665544444445555544444 4655544
No 246
>3c0w_A Intron-encoded endonuclease I-SCEI; endonuclease, homing, ladlidadg, catalytic mechanism, metal binding; HET: DNA; 2.20A {Saccharomyces cerevisiae} PDB: 1r7m_A* 3c0x_A* 3ool_A 3oor_A
Probab=44.37 E-value=9.7 Score=27.22 Aligned_cols=30 Identities=30% Similarity=0.149 Sum_probs=25.5
Q ss_pred CCCEEEEEcCCCCcccCHHHHHHHHhcCCc
Q psy7378 40 TGGYLVYSTCSILPEENEAVVNYALRKRDV 69 (90)
Q Consensus 40 pgG~lvYsTCS~~~eENE~vV~~~l~~~~~ 69 (90)
.++.++.+|.|++.+|.+..++.+..++++
T Consensus 156 ~~~gi~L~T~sFt~~ev~~L~~~L~~kf~L 185 (235)
T 3c0w_A 156 TNKSIVLNTQSFTFEEVEYLVKGLRNKFQL 185 (235)
T ss_dssp CCCCEEECCTTSCHHHHHHHHHHHHHHHCC
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHHhcCe
Confidence 467788999999999999999888887654
No 247
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=43.83 E-value=13 Score=26.82 Aligned_cols=22 Identities=14% Similarity=0.142 Sum_probs=14.8
Q ss_pred HHHHHhhcCCC---CCEEEEEcCCC
Q psy7378 30 AIDCLNARSPT---GGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkp---gG~lvYsTCS~ 51 (90)
+|+.+.+.||| ||+++......
T Consensus 272 ~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 272 ILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp HHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred HHHHHHHhCCCCCCCcEEEEEEecc
Confidence 44455566799 99888765443
No 248
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=43.63 E-value=14 Score=26.44 Aligned_cols=20 Identities=15% Similarity=-0.132 Sum_probs=14.1
Q ss_pred HHHHHhhcCCCCCEEEEEcCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS 50 (90)
++..+.++| |||+++.|..-
T Consensus 131 ~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 131 ACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp HHHHHHHHH-TTSEEEEEEEB
T ss_pred HHHHHHHhC-cCcEEEEEecc
Confidence 445556678 99999987543
No 249
>2q22_A Uncharacterized protein; YP_323524.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PG4; 2.11A {Anabaena variabilis atcc 29413} SCOP: d.365.1.1
Probab=43.47 E-value=21 Score=23.91 Aligned_cols=67 Identities=6% Similarity=0.016 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeecCCCCCCCCccccCCC
Q psy7378 20 GKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVNYRQN 89 (90)
Q Consensus 20 ~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~~~~~g~dGf~~~~~~ 89 (90)
...|++-|+++|..+. ..-..+..-.|.-..+|.....+..++.+++......+...++=|.+|+++
T Consensus 32 s~~~r~~Lr~aL~~~~---~~sd~~~lGIcA~s~~~a~~ALr~~~~alg~~~~~~~~~~~GpVfLK~N~~ 98 (139)
T 2q22_A 32 KPSEKESVRRALILIT---KLSDYQILGICADTADEGLLAMKTYSHALGYEVPIDLPVVEGPVYIKLNGK 98 (139)
T ss_dssp CHHHHHHHHHHHHHHH---HTSSEEEEEEEESSHHHHHHHHHHHHHHTTCCCC-CCCCCSSSEEEEEETT
T ss_pred CHHHHHHHHHHHHHHH---hhCCcEEEEeecCCHHHHHHHHHHHHHHhCCCccccCCCCCCCEEEEecCC
Confidence 3456677777776664 446899999999999999999999888776432211133344556666654
No 250
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=43.00 E-value=15 Score=25.03 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=15.2
Q ss_pred HHHHHhhcCCCCCEEEEEcCC
Q psy7378 30 AIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS 50 (90)
+++.+.+.|| ||.++..++.
T Consensus 113 ~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 113 SFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp HHHHHHHHBC-SSCEEEEEEC
T ss_pred HHHHHHHHhC-CcEEEEEEcC
Confidence 4555667789 9988888876
No 251
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=42.71 E-value=11 Score=29.68 Aligned_cols=39 Identities=15% Similarity=0.044 Sum_probs=24.7
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCccc-C-HHHHHHHHhc
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEE-N-EAVVNYALRK 66 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eE-N-E~vV~~~l~~ 66 (90)
.+++..+.+..+|..+.|++||...-.= + +.+++.+-++
T Consensus 130 ~~aI~~~~~~~~P~~I~V~tTC~~eiIGdDi~~v~~~~~~~ 170 (519)
T 1qgu_B 130 NLGLQNASALYKPEIIAVSTTCMAEVIGDDLQAFIANAKKD 170 (519)
T ss_dssp HHHHHHHHHHHCCSEEEEEECHHHHHHTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCCCEEEEeCCCcHHHhCCCHHHHHHHHHHh
Confidence 3444555555599999999999865432 2 4455555444
No 252
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=42.40 E-value=11 Score=29.79 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=25.7
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccC--HHHHHHHHhcC
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEEN--EAVVNYALRKR 67 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eEN--E~vV~~~l~~~ 67 (90)
.++++.+....+|..+.|++||...-.=. +.+++.+-++.
T Consensus 132 ~~aI~~~~~~~~P~~I~V~tTC~~e~IGdDi~~v~~~~~~~~ 173 (523)
T 3u7q_B 132 KDGLQNCKATYKPDMIAVSTTCMAEVIGDDLNAFINNSKKEG 173 (523)
T ss_dssp HHHHHHHHHHHCCSEEEEEECHHHHHHTCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhCCCEEEEeCCcHHHHhcCCHHHHHHHHHHhc
Confidence 34455555555999999999998654433 45555554444
No 253
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=42.36 E-value=14 Score=26.48 Aligned_cols=22 Identities=9% Similarity=0.046 Sum_probs=14.5
Q ss_pred HHHHHhhcCCC---CCEEEEEcCCC
Q psy7378 30 AIDCLNARSPT---GGYLVYSTCSI 51 (90)
Q Consensus 30 al~~~~~~lkp---gG~lvYsTCS~ 51 (90)
+|+.+.+.||| ||+++......
T Consensus 267 ~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 267 ILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp HHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred HHHHHHHhCCCCCCCcEEEEEEeec
Confidence 34444556699 99988775543
No 254
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=42.18 E-value=2.5 Score=32.12 Aligned_cols=32 Identities=13% Similarity=0.319 Sum_probs=22.8
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCCCC--cccCHH
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCSIL--PEENEA 58 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS~~--~eENE~ 58 (90)
|..++.+..++|||||.++-+.|+++ |.|.+.
T Consensus 168 l~~~l~a~~r~Lkp~G~~iP~~atly~apie~~~ 201 (376)
T 4hc4_A 168 LSSVLHARTKWLKEGGLLLPASAELFIVPISDQM 201 (376)
T ss_dssp HHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred hhhHHHHHHhhCCCCceECCccceEEEEEeccch
Confidence 44556666678999999998888764 455543
No 255
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=41.96 E-value=11 Score=26.35 Aligned_cols=25 Identities=16% Similarity=0.073 Sum_probs=18.2
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCC
Q psy7378 26 VILEAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 26 Ll~~al~~~~~~lkpgG~lvYsTCS 50 (90)
.+...++.+.++|+|||.++...|.
T Consensus 52 ~~~~~l~~~~~~Lk~~g~i~v~~~d 76 (260)
T 1g60_A 52 FTYRWIDKVLDKLDKDGSLYIFNTP 76 (260)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHhcCCeEEEEEcCc
Confidence 4455666677889999998877653
No 256
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=41.76 E-value=9 Score=27.52 Aligned_cols=20 Identities=10% Similarity=0.064 Sum_probs=15.1
Q ss_pred HHHHHHHhhcCCCCCEEEEE
Q psy7378 28 LEAIDCLNARSPTGGYLVYS 47 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYs 47 (90)
.++++.+.+.|+|||.|+..
T Consensus 232 ~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 232 EDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp HHHHHHHGGGEEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEE
Confidence 34566677888999999874
No 257
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=41.37 E-value=18 Score=27.95 Aligned_cols=18 Identities=6% Similarity=0.130 Sum_probs=14.2
Q ss_pred HHHHHhhcCCCCCEEEEE
Q psy7378 30 AIDCLNARSPTGGYLVYS 47 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYs 47 (90)
+|+.+.+.|||||+||.+
T Consensus 341 ~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 341 KVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHHHTTCCTTCEEEES
T ss_pred HHHHHHHhCCCCeEEEEe
Confidence 455666789999999876
No 258
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=41.25 E-value=6.5 Score=25.66 Aligned_cols=17 Identities=29% Similarity=0.384 Sum_probs=14.1
Q ss_pred HhhcCCCCCEEEEEcCC
Q psy7378 34 LNARSPTGGYLVYSTCS 50 (90)
Q Consensus 34 ~~~~lkpgG~lvYsTCS 50 (90)
+.++|||||+++.+...
T Consensus 160 ~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 160 LMTQLDEGGILVLPVGE 176 (210)
T ss_dssp HHHTEEEEEEEEEEECS
T ss_pred HHHhcccCcEEEEEEcC
Confidence 45678999999998877
No 259
>1k7j_A Protein YCIO, protein TF1; structural genomics, X-RAY crystallography, putative translation factor, PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: d.115.1.1 PDB: 1kk9_A
Probab=40.60 E-value=10 Score=26.21 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=22.4
Q ss_pred HHhhcCCCCCEEEEEcCCCC----cccCHHHHHHHH
Q psy7378 33 CLNARSPTGGYLVYSTCSIL----PEENEAVVNYAL 64 (90)
Q Consensus 33 ~~~~~lkpgG~lvYsTCS~~----~eENE~vV~~~l 64 (90)
.+++.|+.||+++|-|=|.+ ..-|++.|+++.
T Consensus 19 ~a~~~L~~G~iva~pTdtvygL~~da~n~~Av~rl~ 54 (206)
T 1k7j_A 19 QAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERIC 54 (206)
T ss_dssp HHHHHHHTTCCEEEEETTEEEEEEETTCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCEEEEEEeCCCHHHHHHHH
Confidence 34455588999999997654 345777777764
No 260
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=40.57 E-value=62 Score=24.81 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=28.1
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR 67 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~ 67 (90)
.+.+.+.+.+++|.++|+.+ |+.|.-.+++.+.+++..
T Consensus 110 ~~~~~i~~~l~~g~iVV~~S-TV~pgtt~~v~~~i~e~~ 147 (431)
T 3ojo_A 110 RALDSILPFLKKGNTIIVES-TIAPKTMDDFVKPVIENL 147 (431)
T ss_dssp HHHHHHGGGCCTTEEEEECS-CCCTTHHHHTHHHHHHTT
T ss_pred HHHHHHHHhCCCCCEEEEec-CCChhHHHHHHHHHHHHc
Confidence 34555667789988888754 888888888888777743
No 261
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=39.48 E-value=28 Score=26.70 Aligned_cols=44 Identities=16% Similarity=0.293 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhc---CCcEEeec
Q psy7378 22 TSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRK---RDVKLVPT 74 (90)
Q Consensus 22 ~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~---~~~~l~~~ 74 (90)
.|.+|+++++..+ |.|-+|--|||+.+ -+..+.++. .++-+-..
T Consensus 154 ~t~~Iakkii~~l-----pEgAII~nTCTipp----~~ly~~le~l~R~DvgIsS~ 200 (358)
T 2b0j_A 154 KQPDIIKKFADAI-----PEGAIVTHACTIPT----TKFAKIFKDLGREDLNITSY 200 (358)
T ss_dssp THHHHHHHHGGGS-----CTTCEEEECSSSCH----HHHHHHHHHTTCTTSEEEEC
T ss_pred CcHHHHHHHHhhC-----cCCCEEecccCCCH----HHHHHHHHHhCcccCCeecc
Confidence 5778887777664 56677777999999 566666543 24555554
No 262
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=39.44 E-value=22 Score=26.83 Aligned_cols=29 Identities=14% Similarity=0.128 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCEEEEEcCC
Q psy7378 21 KTSLIVILEAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 21 ~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS 50 (90)
+-|+++ ...|++-++-|+|||++|.++..
T Consensus 183 Qf~~D~-~~FL~~Ra~EL~pGG~mvl~~~g 211 (359)
T 1m6e_X 183 QFQEDH-ALFLRCRAQEVVPGGRMVLTILG 211 (359)
T ss_dssp HHHHHH-HHHHHHHHHHBCTTCEEEEEEEE
T ss_pred HHHHHH-HHHHHHHHHHhcCCceEEEEEec
Confidence 334443 34566667788999999998753
No 263
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=39.36 E-value=21 Score=23.63 Aligned_cols=24 Identities=25% Similarity=0.445 Sum_probs=20.3
Q ss_pred CCCCEEEEEcCCCCcccCHHHHHHHHhcC
Q psy7378 39 PTGGYLVYSTCSILPEENEAVVNYALRKR 67 (90)
Q Consensus 39 kpgG~lvYsTCS~~~eENE~vV~~~l~~~ 67 (90)
.+.|.++|+ .+||...+..++...
T Consensus 86 ~~dGl~iYC-----DdeNk~~m~Ki~~~l 109 (126)
T 2rbg_A 86 EVDGLLVYC-----DDENKVFMSKIVDNL 109 (126)
T ss_dssp CCCEEEEEE-----CGGGHHHHHHHHHTS
T ss_pred CCCceEEEe-----CCCchhHHHHHHHhc
Confidence 689999995 589999999888765
No 264
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=39.03 E-value=13 Score=26.30 Aligned_cols=41 Identities=10% Similarity=-0.026 Sum_probs=23.8
Q ss_pred HHHHHhhcCCCCC--EEEEEcCCCCcccCH---HHHHHHHhcC-CcEEee
Q psy7378 30 AIDCLNARSPTGG--YLVYSTCSILPEENE---AVVNYALRKR-DVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG--~lvYsTCS~~~eENE---~vV~~~l~~~-~~~l~~ 73 (90)
+|+.+.+.||||| .+|..+-. .++. +.+..+.+.+ .+.+..
T Consensus 165 ~L~~~~r~LkpGG~~~fv~kv~~---~~~~~~~~~l~~l~~~f~~v~~~k 211 (265)
T 2oxt_A 165 ILELLEKWKVKNPSADFVVKVLC---PYSVEVMERLSVMQRKWGGGLVRN 211 (265)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESC---TTSHHHHHHHHHHHHHHCCEEECC
T ss_pred HHHHHHHHhccCCCeEEEEEeCC---CCChhHHHHHHHHHHHcCCEEEEE
Confidence 4556667789999 88875533 3344 4444444444 455544
No 265
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=39.00 E-value=15 Score=27.97 Aligned_cols=32 Identities=3% Similarity=-0.084 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCEEEEEcCCCC
Q psy7378 20 GKTSLIVILEAIDCLNARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 20 ~~~Q~~Ll~~al~~~~~~lkpgG~lvYsTCS~~ 52 (90)
.+-|++ +...|++-++-|+|||++|.++..-.
T Consensus 198 ~Qf~~D-~~~FL~~Ra~eL~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 198 DQFTKD-FTTFLRIHSEELISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHH-HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHH-HHHHHHHHHHHhccCCeEEEEEecCC
Confidence 455555 45677888888999999999886543
No 266
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=37.88 E-value=20 Score=27.17 Aligned_cols=42 Identities=17% Similarity=0.078 Sum_probs=33.6
Q ss_pred HHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeec
Q psy7378 33 CLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPT 74 (90)
Q Consensus 33 ~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~ 74 (90)
.+...|+|||.+|-..=-+..--.|.+|..+-.++ -++...+
T Consensus 244 ~al~~L~pGGtlv~~aYGyADR~SE~vV~alARkF~~~rv~~P 286 (324)
T 3trk_A 244 DSLRLLKPGGSLLIRAYGYADRTSERVICVLGRKFRSSRALKP 286 (324)
T ss_dssp HGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEECC
T ss_pred HHHhhcCCCceEEEEeecccccchHHHHHHHHhhheeeeeecC
Confidence 35577899999999999999999999998877776 4555444
No 267
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=37.72 E-value=8.7 Score=25.12 Aligned_cols=18 Identities=22% Similarity=0.209 Sum_probs=13.7
Q ss_pred HHhhcCCCCCEEEEEcCC
Q psy7378 33 CLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 33 ~~~~~lkpgG~lvYsTCS 50 (90)
.+.++|||||+++.++-+
T Consensus 162 ~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 162 PLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp HHHHTEEEEEEEEEEESS
T ss_pred HHHHHcCCCcEEEEEECC
Confidence 345678999999998654
No 268
>1hru_A YRDC gene product; protein folding, structural genomics, RNA, SUA5, PSI, protein structure initiative, midwest center for structural genomics; 2.00A {Escherichia coli} SCOP: d.115.1.1
Probab=37.52 E-value=12 Score=25.33 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=22.7
Q ss_pred HHHhhcCCCCCEEEEEcCCCCc----ccCHHHHHHHH
Q psy7378 32 DCLNARSPTGGYLVYSTCSILP----EENEAVVNYAL 64 (90)
Q Consensus 32 ~~~~~~lkpgG~lvYsTCS~~~----eENE~vV~~~l 64 (90)
+.+++.|+.||+++|-|=|.+- .-|++.|+++.
T Consensus 11 ~~a~~~L~~G~iva~ptdt~ygL~~da~~~~av~rl~ 47 (188)
T 1hru_A 11 AAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVMRLL 47 (188)
T ss_dssp HHHHHHHHTTCCEEEECSSSEEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEeCCCEeeeEEcCCCHHHHHHHH
Confidence 3444556899999999977543 35677777664
No 269
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=37.45 E-value=13 Score=26.42 Aligned_cols=23 Identities=17% Similarity=0.023 Sum_probs=17.7
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcC
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTC 49 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTC 49 (90)
+..+++.+.++|||||.++....
T Consensus 76 l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 76 LDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEC
Confidence 44566777888999999987654
No 270
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=37.11 E-value=14 Score=26.15 Aligned_cols=31 Identities=10% Similarity=0.101 Sum_probs=17.9
Q ss_pred HHHHh-hcCCCCCEEEEEcCCCCcccCHHHHHHHHh
Q psy7378 31 IDCLN-ARSPTGGYLVYSTCSILPEENEAVVNYALR 65 (90)
Q Consensus 31 l~~~~-~~lkpgG~lvYsTCS~~~eENE~vV~~~l~ 65 (90)
++.+. +.++|||.+++. +...+++.+ ..+++
T Consensus 231 ~~~i~~~~l~pgG~l~~e---~~~~q~~~v-~~~~~ 262 (284)
T 1nv8_A 231 YREFFGRYDTSGKIVLME---IGEDQVEEL-KKIVS 262 (284)
T ss_dssp HHHHHHHCCCTTCEEEEE---CCTTCHHHH-TTTST
T ss_pred HHHHHHhcCCCCCEEEEE---ECchHHHHH-HHHHH
Confidence 44455 667999999963 333444444 34343
No 271
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=36.96 E-value=34 Score=24.78 Aligned_cols=21 Identities=10% Similarity=0.238 Sum_probs=13.7
Q ss_pred HHHHhhcCCCCCEEEEEcCCC
Q psy7378 31 IDCLNARSPTGGYLVYSTCSI 51 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~ 51 (90)
|+.+.+.|+|||+|+-.-.-+
T Consensus 266 L~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 266 LERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp HHHHHHHCCTTCEEEEEECCC
T ss_pred HHHHHhhCCCCCEEEEEEeee
Confidence 334445569999988765544
No 272
>2zom_A CUTA1, protein CUTA, chloroplast, putative, expressed; trimeric structure, protein stability, unknown function; 3.02A {Oryza sativa subsp}
Probab=36.50 E-value=14 Score=23.68 Aligned_cols=41 Identities=22% Similarity=0.370 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCcccCHHHHHHHHhcC-C--cEEeecCCCCCCCCccccCC
Q psy7378 42 GYLVYSTCSILPEENEAVVNYALRKR-D--VKLVPTGLDFGTEGFVNYRQ 88 (90)
Q Consensus 42 G~lvYsTCS~~~eENE~vV~~~l~~~-~--~~l~~~~~~~g~dGf~~~~~ 88 (90)
=.+||+|| ...++-+...+.++++. - +.+.+ +...++.|.|
T Consensus 10 ~~~V~tT~-p~~e~A~~iA~~Lve~rLAACvni~p-----~i~S~Y~W~G 53 (113)
T 2zom_A 10 SIVVYVTV-PNKEAGKRLAGSIISEKLAACVNIVP-----GIESVYWWEG 53 (113)
T ss_dssp EEEEEEEE-SSHHHHHHHHHHHHHTTSCSEEEEEE-----EEEEEEEETT
T ss_pred EEEEEEec-CCHHHHHHHHHHHHhcCeEEEEEecC-----CccEEEEeCC
Confidence 36888888 45566667777777654 2 44443 2344666666
No 273
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=35.97 E-value=95 Score=23.12 Aligned_cols=44 Identities=0% Similarity=-0.131 Sum_probs=26.2
Q ss_pred HHHHhhcCCCC-CEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeec
Q psy7378 31 IDCLNARSPTG-GYLVYSTCSILPEENEAVVNYALRKR-DVKLVPT 74 (90)
Q Consensus 31 l~~~~~~lkpg-G~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~ 74 (90)
|+.+...|+|| |.+|--.-..+-.+..+.+..+-..+ .+.+..+
T Consensus 173 L~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~F~~V~~~KP 218 (300)
T 3eld_A 173 LENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVP 218 (300)
T ss_dssp HHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHHHCCEEECCT
T ss_pred HHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHhCCcEEEEeC
Confidence 56677889999 99887543333444444444444444 4555544
No 274
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=35.94 E-value=12 Score=26.68 Aligned_cols=18 Identities=11% Similarity=0.167 Sum_probs=13.8
Q ss_pred HHHHHhhcCCCCCEEEEE
Q psy7378 30 AIDCLNARSPTGGYLVYS 47 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYs 47 (90)
+++.+.+.|||||.++..
T Consensus 201 ~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 201 TLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp THHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEE
Confidence 356677889999999843
No 275
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=35.76 E-value=64 Score=25.09 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=25.9
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHH
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYAL 64 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l 64 (90)
.+.+.+.+.++||.++|+.+ |+.|.-.+.+.+.++
T Consensus 128 ~~~~~i~~~l~~g~iVV~~S-Tv~pgtt~~v~~~il 162 (478)
T 3g79_A 128 DGIRNVGKYLKPGMLVVLES-TITPGTTEGMAKQIL 162 (478)
T ss_dssp HHHHHHHHHCCTTCEEEECS-CCCTTTTTTHHHHHH
T ss_pred HHHHHHHhhcCCCcEEEEeC-CCChHHHHHHHHHHH
Confidence 34445556678888888754 888888888887777
No 276
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=35.63 E-value=12 Score=27.27 Aligned_cols=19 Identities=5% Similarity=0.078 Sum_probs=13.8
Q ss_pred HHHHHhhcCCCCCEEEEEc
Q psy7378 30 AIDCLNARSPTGGYLVYST 48 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsT 48 (90)
+|+.+.+.|||||.++.+.
T Consensus 288 ~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 288 FLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEEE
Confidence 4455566679999998774
No 277
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=34.87 E-value=9.2 Score=25.48 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=14.2
Q ss_pred HHHhhcCCCCCEEEEEcCC
Q psy7378 32 DCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 32 ~~~~~~lkpgG~lvYsTCS 50 (90)
+.+.+.|||||+++.++-.
T Consensus 178 ~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 178 TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp HHHHHTEEEEEEEEEEESC
T ss_pred HHHHHHhcCCCEEEEEEec
Confidence 3455678999999987654
No 278
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=34.50 E-value=8.7 Score=25.43 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=12.8
Q ss_pred HHHhhcCCCCCEEEEEc
Q psy7378 32 DCLNARSPTGGYLVYST 48 (90)
Q Consensus 32 ~~~~~~lkpgG~lvYsT 48 (90)
+.+.++|||||+++.++
T Consensus 177 ~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 177 EILVDLLAENGKLIIPI 193 (227)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEE
Confidence 44456779999998864
No 279
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=34.10 E-value=12 Score=28.12 Aligned_cols=44 Identities=11% Similarity=0.126 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCEEEEEcCC--CCcccCHHHHH-HHHhcCCcE
Q psy7378 23 SLIVILEAIDCLNARSPTGGYLVYSTCS--ILPEENEAVVN-YALRKRDVK 70 (90)
Q Consensus 23 Q~~Ll~~al~~~~~~lkpgG~lvYsTCS--~~~eENE~vV~-~~l~~~~~~ 70 (90)
+...+.+++ .+|||||++++.++. ++....+..+. ++++...++
T Consensus 286 ~~~fl~~~~----~~Lk~gG~~a~V~p~~~L~~~~~~~~iR~~L~~~~~l~ 332 (445)
T 2okc_A 286 QLNFLQHMM----LMLKTGGRAAVVLPDNVLFEAGAGETIRKRLLQDFNLH 332 (445)
T ss_dssp HHHHHHHHH----HHEEEEEEEEEEEEHHHHHCSTHHHHHHHHHHHHEEEE
T ss_pred HHHHHHHHH----HHhccCCEEEEEECCcccccCcHHHHHHHHHHhcCcEE
Confidence 344555555 456999999998865 23222234444 455555443
No 280
>1jcu_A Conserved protein MTH1692; mixed alpha-beta structure, structural genomics; NMR {Methanothermobacterthermautotrophicus} SCOP: d.115.1.1
Probab=33.60 E-value=15 Score=25.46 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=23.8
Q ss_pred HHhhcCCCCCEEEEEcCCCC----cccCHHHHHHHHh
Q psy7378 33 CLNARSPTGGYLVYSTCSIL----PEENEAVVNYALR 65 (90)
Q Consensus 33 ~~~~~lkpgG~lvYsTCS~~----~eENE~vV~~~l~ 65 (90)
.+++.|+.||+++|-|=|.+ ..-|++.|+++.+
T Consensus 18 ~a~~~L~~G~vVa~pTdtvygL~~da~n~~Av~rl~~ 54 (208)
T 1jcu_A 18 EAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFR 54 (208)
T ss_dssp HHHHHHHTTCEEECCCSSSCEEEEETTSHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCEEEEEEeCCCHHHHHHHHH
Confidence 34445578999999997765 4567788887753
No 281
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=33.50 E-value=77 Score=23.13 Aligned_cols=49 Identities=12% Similarity=-0.033 Sum_probs=30.4
Q ss_pred hcCCCCCEEEEEcCCCC-cccCHHHHHH---HHhcCCcEEeecCCCCCCCCcc
Q psy7378 36 ARSPTGGYLVYSTCSIL-PEENEAVVNY---ALRKRDVKLVPTGLDFGTEGFV 84 (90)
Q Consensus 36 ~~lkpgG~lvYsTCS~~-~eENE~vV~~---~l~~~~~~l~~~~~~~g~dGf~ 84 (90)
+.||||.+|--..+|-. +.+.+..++. .|++.+++++.-+-....+|++
T Consensus 7 ~~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ 59 (327)
T 4h1h_A 7 AKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMM 59 (327)
T ss_dssp CCCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTS
T ss_pred CCCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcc
Confidence 45799999998888854 3344444444 3566788886654333444543
No 282
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=33.45 E-value=12 Score=28.75 Aligned_cols=45 Identities=9% Similarity=-0.030 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEee
Q psy7378 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVP 73 (90)
Q Consensus 26 Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~ 73 (90)
|.+.|++.|...|+|||.+|- =++.-|.++.+..+.+.+ -++..+
T Consensus 195 L~ElALdfA~~~LkpGGsFvV---KVFQGsg~~~L~~lrk~F~~VK~fK 240 (344)
T 3r24_A 195 FFTYLCGFIKQKLALGGSIAV---KITEHSWNADLYKLMGHFSWWTAFV 240 (344)
T ss_dssp HHHHHHHHHHHHEEEEEEEEE---EECSSSCCHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHhCcCCCEEEE---EEecCCCHHHHHHHHhhCCeEEEEC
Confidence 556688999999999999975 355555556666666544 355554
No 283
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=33.36 E-value=99 Score=22.72 Aligned_cols=49 Identities=8% Similarity=-0.027 Sum_probs=30.4
Q ss_pred hcCCCCCEEEEEcCCCCcc-cCHHHHHH---HHhcCCcEEeecCCCCCCCCcc
Q psy7378 36 ARSPTGGYLVYSTCSILPE-ENEAVVNY---ALRKRDVKLVPTGLDFGTEGFV 84 (90)
Q Consensus 36 ~~lkpgG~lvYsTCS~~~e-ENE~vV~~---~l~~~~~~l~~~~~~~g~dGf~ 84 (90)
+.||||.+|--..+|-... +.+..++. .|++.+++++.-+-....+|++
T Consensus 7 ~~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ 59 (331)
T 4e5s_A 7 TKLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFA 59 (331)
T ss_dssp CCCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTS
T ss_pred CCCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCcc
Confidence 4689999998888886543 33444443 4566788887643223344443
No 284
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.66 E-value=58 Score=20.79 Aligned_cols=48 Identities=10% Similarity=0.188 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCCCcccCHHHHHHHHhcC-CcEEeecCCCCCCCCccccCC
Q psy7378 40 TGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTGLDFGTEGFVNYRQ 88 (90)
Q Consensus 40 pgG~lvYsTCS~~~eENE~vV~~~l~~~-~~~l~~~~~~~g~dGf~~~~~ 88 (90)
|-|.|||...-....-+++.+..++..+ .+.-+++... ...||..|..
T Consensus 16 ~~G~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g-~~tgfVrf~~ 64 (121)
T 1owx_A 16 KIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRG-AKEGIILFKE 64 (121)
T ss_dssp CCCCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTT-CSEEEEEESS
T ss_pred cCCeEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecC-CCEEEEEECC
Confidence 5677888663222225789999999888 5877776432 3458877754
No 285
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=32.26 E-value=16 Score=26.99 Aligned_cols=44 Identities=9% Similarity=0.049 Sum_probs=25.7
Q ss_pred HHHHHhhcCCCCCEEEEEcCCCCccc-CHHHHHHHHhcC-CcEEee
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSILPEE-NEAVVNYALRKR-DVKLVP 73 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~~~eE-NE~vV~~~l~~~-~~~l~~ 73 (90)
.++.+.+.|+|||+++..+.+..+.+ -..+++.+-+.+ .+.+..
T Consensus 182 fl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~ 227 (317)
T 3gjy_A 182 FFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIA 227 (317)
T ss_dssp HHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEE
Confidence 45556677899999998876543322 233444444455 354443
No 286
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=32.13 E-value=11 Score=25.32 Aligned_cols=17 Identities=29% Similarity=0.345 Sum_probs=13.1
Q ss_pred HhhcCCCCCEEEEEcCC
Q psy7378 34 LNARSPTGGYLVYSTCS 50 (90)
Q Consensus 34 ~~~~lkpgG~lvYsTCS 50 (90)
+.+.|||||.++.++-+
T Consensus 175 ~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 175 LIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp HHHTEEEEEEEEEEECS
T ss_pred HHHhcCCCcEEEEEEec
Confidence 34667999999997754
No 287
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=31.41 E-value=61 Score=24.88 Aligned_cols=38 Identities=8% Similarity=0.049 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhc
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRK 66 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~ 66 (90)
+++++.+.+.+++|..+|+.+ |+.|.-.+.+.+.+.+.
T Consensus 109 ~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 109 FAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEV 146 (446)
T ss_dssp HHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHh
Confidence 344555667789888888854 88888878776655544
No 288
>1osc_A Similar to divalent cation tolerant protein CUTA; copper resistance, structural proteomics in europe, spine, structural genomics; 2.15A {Rattus norvegicus} SCOP: d.58.5.2
Probab=31.15 E-value=24 Score=23.03 Aligned_cols=42 Identities=17% Similarity=0.356 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCCcccCHHHHHHHHhcC-C--cEEeecCCCCCCCCccccCC
Q psy7378 41 GGYLVYSTCSILPEENEAVVNYALRKR-D--VKLVPTGLDFGTEGFVNYRQ 88 (90)
Q Consensus 41 gG~lvYsTCS~~~eENE~vV~~~l~~~-~--~~l~~~~~~~g~dGf~~~~~ 88 (90)
+=.+||.||. ..++-+.+.+.++++. . +.+.+ +..+++.|.|
T Consensus 22 ~~~~V~tT~p-~~e~A~~iA~~Lve~rLAACvni~p-----~i~S~Y~W~G 66 (126)
T 1osc_A 22 SVSAAFVTCP-NEKVAKEIARAVVEKRLAACVNLIP-----QITSIYEWKG 66 (126)
T ss_dssp SEEEEEEEES-SHHHHHHHHHHHHHTTSCSEEEEEE-----EEEEEEEETT
T ss_pred ceEEEEEecC-CHHHHHHHHHHHHHCCeEEEEEecC-----CccEEEEeCC
Confidence 3468898883 4455566666666654 2 44433 2345666666
No 289
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=31.08 E-value=6.9 Score=28.04 Aligned_cols=22 Identities=18% Similarity=0.051 Sum_probs=17.3
Q ss_pred HHHhhcCCCCCEEEEEcCCCCc
Q psy7378 32 DCLNARSPTGGYLVYSTCSILP 53 (90)
Q Consensus 32 ~~~~~~lkpgG~lvYsTCS~~~ 53 (90)
+.+.++++++|...|+|||...
T Consensus 143 e~a~rlla~~G~~~y~~ls~~~ 164 (299)
T 2h1r_A 143 EFAERMLANVGDSNYSRLTINV 164 (299)
T ss_dssp HHHHHHTCCTTSTTCCHHHHHH
T ss_pred HHHHHHhcCCCCcchhHHHHHH
Confidence 3456778999999999998654
No 290
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=30.74 E-value=33 Score=28.10 Aligned_cols=36 Identities=14% Similarity=0.037 Sum_probs=27.0
Q ss_pred HHHHHhhcCCCCCEEEEEcCCC----CcccCHHHHHHHHh
Q psy7378 30 AIDCLNARSPTGGYLVYSTCSI----LPEENEAVVNYALR 65 (90)
Q Consensus 30 al~~~~~~lkpgG~lvYsTCS~----~~eENE~vV~~~l~ 65 (90)
+++.++..|+.||+++|-|=+. ...-|++.|+++.+
T Consensus 113 ~i~~aa~~L~~G~IVa~pt~ggYgL~cda~n~~AV~rL~~ 152 (657)
T 3ttc_A 113 ALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLRA 152 (657)
T ss_dssp HHHHHHHHHHTTCCEEEECSSSEEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCceeEEEeecCCHHHHHHHHH
Confidence 3444556668999999999885 55678888888764
No 291
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=29.83 E-value=48 Score=24.34 Aligned_cols=17 Identities=18% Similarity=0.188 Sum_probs=12.7
Q ss_pred HHHHhhcCCCCCEEEEE
Q psy7378 31 IDCLNARSPTGGYLVYS 47 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYs 47 (90)
++.+.+.|+|||++|-=
T Consensus 181 y~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 181 YEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp HHHHHHTEEEEEEEEEE
T ss_pred HHHHHHHhCCCCEEEEe
Confidence 45556678999999863
No 292
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=29.48 E-value=1e+02 Score=22.61 Aligned_cols=49 Identities=8% Similarity=-0.057 Sum_probs=30.3
Q ss_pred hcCCCCCEEEEEcCCCCc-ccCHHHHHH---HHhcCCcEEeecCCCCCCCCcc
Q psy7378 36 ARSPTGGYLVYSTCSILP-EENEAVVNY---ALRKRDVKLVPTGLDFGTEGFV 84 (90)
Q Consensus 36 ~~lkpgG~lvYsTCS~~~-eENE~vV~~---~l~~~~~~l~~~~~~~g~dGf~ 84 (90)
+.||||.+|--..+|--. .+....++. .|++.|++++.-+.....+|++
T Consensus 8 ~~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ 60 (336)
T 3sr3_A 8 KSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYR 60 (336)
T ss_dssp CCCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTB
T ss_pred CCCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEccccccccccc
Confidence 458999999888888754 223444443 4566788887643323344543
No 293
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=29.08 E-value=46 Score=22.34 Aligned_cols=18 Identities=6% Similarity=-0.053 Sum_probs=13.0
Q ss_pred hhcCCCCCEEEEEcCCCC
Q psy7378 35 NARSPTGGYLVYSTCSIL 52 (90)
Q Consensus 35 ~~~lkpgG~lvYsTCS~~ 52 (90)
..+++|||.++.++.+..
T Consensus 146 ~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 146 KNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp HHHTTTCSEEEEEEECSS
T ss_pred HHHhCCCCEEEEEEecCC
Confidence 344577999999876653
No 294
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=29.04 E-value=1.1e+02 Score=23.07 Aligned_cols=49 Identities=18% Similarity=0.121 Sum_probs=30.9
Q ss_pred hcCCCCCEEEEEcCCCCc-ccCHHHHHH---HHhcCCcEEeecCCCCCCCCcc
Q psy7378 36 ARSPTGGYLVYSTCSILP-EENEAVVNY---ALRKRDVKLVPTGLDFGTEGFV 84 (90)
Q Consensus 36 ~~lkpgG~lvYsTCS~~~-eENE~vV~~---~l~~~~~~l~~~~~~~g~dGf~ 84 (90)
+.||||.+|--..+|--. .+.+..++. .|++.|++++.-+-....+||+
T Consensus 38 ~~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ 90 (371)
T 3tla_A 38 APLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYR 90 (371)
T ss_dssp CCCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTB
T ss_pred CCCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCcc
Confidence 568999999998888643 234444443 4566788887654333444543
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=28.79 E-value=35 Score=25.17 Aligned_cols=16 Identities=6% Similarity=0.148 Sum_probs=13.0
Q ss_pred HHHHHhhcCCCCC-EEE
Q psy7378 30 AIDCLNARSPTGG-YLV 45 (90)
Q Consensus 30 al~~~~~~lkpgG-~lv 45 (90)
||+.|.+.|+||| .+|
T Consensus 164 aL~~A~~~Lk~gG~~Fv 180 (269)
T 2px2_A 164 ILEMVSDWLSRGPKEFC 180 (269)
T ss_dssp HHHHHHHHHTTCCSEEE
T ss_pred HHHHHHHHhhcCCcEEE
Confidence 7888889999999 443
No 296
>3o3m_B Beta subunit 2-hydroxyacyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_B* 3o3o_B
Probab=28.26 E-value=47 Score=24.73 Aligned_cols=16 Identities=19% Similarity=0.094 Sum_probs=13.8
Q ss_pred CC-CCEEEEEcCCCCcc
Q psy7378 39 PT-GGYLVYSTCSILPE 54 (90)
Q Consensus 39 kp-gG~lvYsTCS~~~e 54 (90)
+. |+.+|-.+|++.|+
T Consensus 24 ~~~G~kvVG~~c~~~P~ 40 (385)
T 3o3m_B 24 SETGKKAIGCFPVYCPE 40 (385)
T ss_dssp HHHCCCEEEECSSCCCH
T ss_pred HHcCCeEEEEEcCcCCH
Confidence 45 88899999999994
No 297
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=27.97 E-value=33 Score=23.74 Aligned_cols=32 Identities=13% Similarity=-0.102 Sum_probs=20.7
Q ss_pred HHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHh
Q psy7378 32 DCLNARSPTGGYLVYSTCSILPEENEAVVNYALR 65 (90)
Q Consensus 32 ~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~ 65 (90)
..+.++|+|||+||.=..+..+ ....|..+++
T Consensus 138 ~~~l~~l~~GG~Iv~DNv~~r~--~y~~v~~~~~ 169 (202)
T 3cvo_A 138 LATAFSITRPVTLLFDDYSQRR--WQHQVEEFLG 169 (202)
T ss_dssp HHHHHHCSSCEEEEETTGGGCS--SGGGGHHHHC
T ss_pred HHHHHhcCCCeEEEEeCCcCCc--chHHHHHHHh
Confidence 3345778999999876544443 3455667765
No 298
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=27.54 E-value=14 Score=26.32 Aligned_cols=16 Identities=13% Similarity=0.154 Sum_probs=12.1
Q ss_pred hhcCCCCCEEEEEcCC
Q psy7378 35 NARSPTGGYLVYSTCS 50 (90)
Q Consensus 35 ~~~lkpgG~lvYsTCS 50 (90)
.+.|||||+++.+..+
T Consensus 162 ~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 162 FTQLKEGGRVIVPINL 177 (317)
T ss_dssp HHHEEEEEEEEEEBCB
T ss_pred HHhcCCCcEEEEEECC
Confidence 4567999999998543
No 299
>3o3m_A Alpha subunit 2-hydroxyisocaproyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_A* 3o3o_A
Probab=27.36 E-value=32 Score=25.88 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=11.3
Q ss_pred CCCCEEEEEcCCCCccc
Q psy7378 39 PTGGYLVYSTCSILPEE 55 (90)
Q Consensus 39 kpgG~lvYsTCS~~~eE 55 (90)
+.|+.+ -.+|++.|+|
T Consensus 27 ~~G~kv-g~~~~~~P~E 42 (408)
T 3o3m_A 27 EEGRPV-GWSTSVFPQE 42 (408)
T ss_dssp HHTCCE-EEECTTSCTH
T ss_pred HcCCeE-EEEeccChHH
Confidence 447776 5589999954
No 300
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=26.35 E-value=1.2e+02 Score=21.20 Aligned_cols=48 Identities=6% Similarity=0.181 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhhcCCC-CCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 24 LIVILEAIDCLNARSPT-GGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 24 ~~Ll~~al~~~~~~lkp-gG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
++.+.+.|+.......| +|.+++..+.- ...++.++.+++++++.+.+
T Consensus 307 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~ 355 (396)
T 3jtx_A 307 FERVIPILQQVFDVKLPDASFYIWLKVPD--GDDLAFARNLWQKAAIQVLP 355 (396)
T ss_dssp HHHHHHHHTTTSCCCCCSSSSEEEEECTT--SCHHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHhcCCccCCCeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeC
Confidence 34444555443344455 67777776653 23355566666767777655
No 301
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=26.28 E-value=45 Score=25.13 Aligned_cols=35 Identities=17% Similarity=0.117 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC----CCEEEEEcCCCCc
Q psy7378 19 IGKTSLIVILEAIDCLNARSPT----GGYLVYSTCSILP 53 (90)
Q Consensus 19 l~~~Q~~Ll~~al~~~~~~lkp----gG~lvYsTCS~~~ 53 (90)
.+.=|++||-..++.+..+.++ |-.+||+=|.--.
T Consensus 35 ~h~GQrKLLlsEIeFLt~~~~~~~~~~~~VVYVGSApG~ 73 (307)
T 3mag_A 35 PYQGQLKLLLGELFFLSKLQRHGILDGATVVYIGSAPGT 73 (307)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCSTTCEEEEESCCSCH
T ss_pred CChhHHHHHHHHHHHHHHHHhcCCCCCcEEEEecccCcc
Confidence 3566889998888888776555 5699999998665
No 302
>1uku_A CUTA1, periplasmic divalent cation tolerance protein CUT; copper tolerance, structural genomics, metal binding P; 1.45A {Pyrococcus horikoshii} SCOP: d.58.5.2 PDB: 1umj_A 1v99_A* 1v9b_A 1j2v_A 2e66_A
Probab=25.22 E-value=34 Score=21.37 Aligned_cols=39 Identities=28% Similarity=0.306 Sum_probs=23.5
Q ss_pred EEEEEcCCCCcccCHHHHHHHHhcC-C--cEEeecCCCCCCCCccccCC
Q psy7378 43 YLVYSTCSILPEENEAVVNYALRKR-D--VKLVPTGLDFGTEGFVNYRQ 88 (90)
Q Consensus 43 ~lvYsTCS~~~eENE~vV~~~l~~~-~--~~l~~~~~~~g~dGf~~~~~ 88 (90)
.+||+||+ +.++-+...+.++++. - +.+.+ + .-+|.|.|
T Consensus 2 ~~V~~T~p-~~~~A~~ia~~Lve~rLAACvni~p-----~-~S~Y~W~G 43 (102)
T 1uku_A 2 IIVYTTFP-DWESAEKVVKTLLKERLIACANLRE-----H-RAFYWWEG 43 (102)
T ss_dssp EEEEEEES-SHHHHHHHHHHHHHTTSCSEEEEEE-----E-EEEEEETT
T ss_pred EEEEEecC-CHHHHHHHHHHHHHCCeEEEEEecC-----C-ceEEEECC
Confidence 58999984 5556667777777654 2 44443 2 33566665
No 303
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=25.14 E-value=28 Score=25.39 Aligned_cols=23 Identities=4% Similarity=-0.138 Sum_probs=16.2
Q ss_pred HHHHHHHHhhcCCCCCEEEEEcCC
Q psy7378 27 ILEAIDCLNARSPTGGYLVYSTCS 50 (90)
Q Consensus 27 l~~al~~~~~~lkpgG~lvYsTCS 50 (90)
+...+..+.++|+|||.++.. |+
T Consensus 85 ~~~~l~~~~rvLk~~G~i~i~-~~ 107 (319)
T 1eg2_A 85 AKRWLAEAERVLSPTGSIAIF-GG 107 (319)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE-EC
T ss_pred HHHHHHHHHHHcCCCeEEEEE-cC
Confidence 444566667889999998764 44
No 304
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=24.78 E-value=6.3 Score=28.01 Aligned_cols=15 Identities=33% Similarity=0.370 Sum_probs=12.2
Q ss_pred cCCCCCEEEEEcCCCC
Q psy7378 37 RSPTGGYLVYSTCSIL 52 (90)
Q Consensus 37 ~lkpgG~lvYsTCS~~ 52 (90)
.+||||.+ |+++|+.
T Consensus 136 vlkPGg~~-y~~lsv~ 150 (285)
T 1zq9_A 136 VAKPGDKL-YCRLSIN 150 (285)
T ss_dssp HCCTTCTT-CSHHHHH
T ss_pred hcCCCCcc-cchhhhh
Confidence 46999996 9999874
No 305
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=24.77 E-value=34 Score=26.20 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=22.5
Q ss_pred HHHHHHhhcCCCCCEEEE-EcCCCCcccCHHHHHHHHhc
Q psy7378 29 EAIDCLNARSPTGGYLVY-STCSILPEENEAVVNYALRK 66 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvY-sTCS~~~eENE~vV~~~l~~ 66 (90)
+.++.+.+.|+|||++|- +.|...++ .-..+...+++
T Consensus 312 eFy~~~~~~L~p~GVlv~Q~~s~~~~~-~~~~i~~tl~~ 349 (381)
T 3c6k_A 312 LILDLSMKVLKQDGKYFTQGNCVNLTE-ALSLYEEQLGR 349 (381)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEETTCHH-HHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcchh-HHHHHHHHHHH
Confidence 356667778899999985 55655543 22333444444
No 306
>1p1l_A CUTA, periplasmic divalent cation tolerance protein CUT; NYSGXRC, PSI, protein structure initiative; 2.00A {Archaeoglobus fulgidus} SCOP: d.58.5.2
Probab=24.74 E-value=27 Score=21.89 Aligned_cols=39 Identities=26% Similarity=0.448 Sum_probs=23.7
Q ss_pred EEEEEcCCCCcccCHHHHHHHHhcC-C--cEEeecCCCCCCCCccccCC
Q psy7378 43 YLVYSTCSILPEENEAVVNYALRKR-D--VKLVPTGLDFGTEGFVNYRQ 88 (90)
Q Consensus 43 ~lvYsTCS~~~eENE~vV~~~l~~~-~--~~l~~~~~~~g~dGf~~~~~ 88 (90)
.+||+||+ +.++-+...+.++++. - +.+.++ ..++.|.|
T Consensus 3 ~~V~~T~p-~~~~A~~ia~~Lve~rLAACvni~pi------~S~Y~W~G 44 (102)
T 1p1l_A 3 NFIYITAP-SLEEAERIAKRLLEKKLAACVNIFPI------KSFFWWEG 44 (102)
T ss_dssp EEEEEEES-SHHHHHHHHHHHHHTTSCSEEEEEEE------EEEEEETT
T ss_pred EEEEEecC-CHHHHHHHHHHHHhCCeEEEEEeccc------eEEEEeCC
Confidence 47999984 5556667777777654 2 444432 34566665
No 307
>2eqa_A Hypothetical protein ST1526; YRDC/RIBB fold, YRDC domain, SUA5 domain, structural genomics, NPPSFA; HET: AMP; 1.80A {Sulfolobus tokodaii} PDB: 3aje_A* 4e1b_A*
Probab=24.07 E-value=29 Score=26.22 Aligned_cols=33 Identities=9% Similarity=0.100 Sum_probs=24.7
Q ss_pred HHhhcCCCCCEEEEEcCCCC----cccCHHHHHHHHh
Q psy7378 33 CLNARSPTGGYLVYSTCSIL----PEENEAVVNYALR 65 (90)
Q Consensus 33 ~~~~~lkpgG~lvYsTCS~~----~eENE~vV~~~l~ 65 (90)
.++..|+.||.++|-|=|.+ ..-|++-|+++.+
T Consensus 19 ~aa~~L~~G~iVa~PTeTvYGLg~da~n~~AV~rI~~ 55 (352)
T 2eqa_A 19 IAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQ 55 (352)
T ss_dssp HHHHHHHTTCCEEECCSSSCEEEEETTCHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCEeEEEEeCCCHHHHHHHHH
Confidence 34445588999999998876 3568888888753
No 308
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=23.42 E-value=90 Score=23.00 Aligned_cols=45 Identities=9% Similarity=0.164 Sum_probs=27.8
Q ss_pred HHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcEEeecC
Q psy7378 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTG 75 (90)
Q Consensus 29 ~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~~~ 75 (90)
.+++.+.+.+++|. +|-.++|..+...+...+. +...++..++.+
T Consensus 96 ~vl~~l~~~l~~g~-iiId~st~~~~~~~~~~~~-l~~~g~~~vdap 140 (358)
T 4e21_A 96 SMLQRMTPLLAAND-IVIDGGNSHYQDDIRRADQ-MRAQGITYVDVG 140 (358)
T ss_dssp HHHHHHGGGCCTTC-EEEECSSCCHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred HHHHHHHhhCCCCC-EEEeCCCCChHHHHHHHHH-HHHCCCEEEeCC
Confidence 34455566777665 4556777777666665444 555677777764
No 309
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=22.54 E-value=89 Score=18.62 Aligned_cols=32 Identities=13% Similarity=0.173 Sum_probs=22.0
Q ss_pred CCCCCEEEEEc-------CCCCcccCHHHHHHHHhcC--CcEEeec
Q psy7378 38 SPTGGYLVYST-------CSILPEENEAVVNYALRKR--DVKLVPT 74 (90)
Q Consensus 38 lkpgG~lvYsT-------CS~~~eENE~vV~~~l~~~--~~~l~~~ 74 (90)
++...++||+. |.+.. .+..+|+++ .++..++
T Consensus 15 i~~~~Vvvy~k~t~~~p~Cp~C~-----~ak~~L~~~gi~~~~~dI 55 (109)
T 3ipz_A 15 VNSEKVVLFMKGTRDFPMCGFSN-----TVVQILKNLNVPFEDVNI 55 (109)
T ss_dssp HTSSSEEEEESBCSSSBSSHHHH-----HHHHHHHHTTCCCEEEEG
T ss_pred HccCCEEEEEecCCCCCCChhHH-----HHHHHHHHcCCCcEEEEC
Confidence 36788999986 87765 456667666 4555554
No 310
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=22.10 E-value=1.3e+02 Score=21.53 Aligned_cols=48 Identities=6% Similarity=0.041 Sum_probs=29.3
Q ss_pred HHHHHHHHHHH-hhcCCC-CCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 24 LIVILEAIDCL-NARSPT-GGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 24 ~~Ll~~al~~~-~~~lkp-gG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
++.+.+.|+.. ++...| +|..++..+. ....+++++.+++++++-+.+
T Consensus 354 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~p 403 (449)
T 3qgu_A 354 AQILKTTFTEMGFSVYGGDDAPYIWVGFP--GKPSWDVFAEILERCNIVTTP 403 (449)
T ss_dssp HHHHHHHHHHTTCCEEESSSSSEEEEECT--TSCHHHHHHHHHHHHCEECEE
T ss_pred HHHHHHHHHHCCCeeeCCCCeeEEEEECC--CCCHHHHHHHHHHHCCEEEec
Confidence 44555555543 344455 6888888776 334456667777776776655
No 311
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=22.02 E-value=65 Score=26.76 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=26.2
Q ss_pred HHHHhhcCCCCCEEEEEcCCC----CcccCHHHHHHHHh
Q psy7378 31 IDCLNARSPTGGYLVYSTCSI----LPEENEAVVNYALR 65 (90)
Q Consensus 31 l~~~~~~lkpgG~lvYsTCS~----~~eENE~vV~~~l~ 65 (90)
++.+++.|+.||+++|-|=+. ...-|++.|+++.+
T Consensus 205 i~~aa~~L~~G~IVa~pt~t~YgL~cda~n~~AV~rL~~ 243 (761)
T 3vth_A 205 IKCVAKALKEGKIVAIKGIGGFHLAVNALDDEAVATLRR 243 (761)
T ss_dssp HHHHHHHHHTTCCEEEECSSSEEEECBTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCcEEEEEecCCCHHHHHHHHH
Confidence 344455568999999999886 55678888888753
No 312
>2yjg_A Lactate racemase apoprotein; isomerase, nickel-dependent enzyme; 1.80A {Thermoanaerobacterium thermosaccharolyorganism_taxid}
Probab=27.56 E-value=19 Score=27.91 Aligned_cols=23 Identities=17% Similarity=0.408 Sum_probs=17.0
Q ss_pred HHHHHHhhcCCCCCE-EEEEcCCC
Q psy7378 29 EAIDCLNARSPTGGY-LVYSTCSI 51 (90)
Q Consensus 29 ~al~~~~~~lkpgG~-lvYsTCS~ 51 (90)
+++.++.+.+|+||. |+|+-|+=
T Consensus 298 Kal~~a~~~v~~GG~iIl~a~c~~ 321 (436)
T 2yjg_A 298 KGMTAGEAACKDGGVIIIAAECAD 321 (436)
Confidence 466777888999985 56777754
No 313
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=21.33 E-value=2.1e+02 Score=19.72 Aligned_cols=53 Identities=19% Similarity=0.232 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHH---HhhcCCC-CCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 21 KTSLIVILEAIDC---LNARSPT-GGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 21 ~~Q~~Ll~~al~~---~~~~lkp-gG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
...++.+.+.|+. .+..+.| +|.+++..++-.....+++++.+++++++-+.+
T Consensus 300 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 356 (391)
T 4dq6_A 300 ESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQ 356 (391)
T ss_dssp HHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEE
T ss_pred HHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeC
Confidence 3344555566654 2344555 455554554322223345555555555876655
No 314
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=21.31 E-value=68 Score=21.41 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=24.1
Q ss_pred HHHHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHhcCCcE
Q psy7378 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVK 70 (90)
Q Consensus 26 Ll~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~~~~~~ 70 (90)
++..+++.+..+++++|.++ +.+...++...+...+++.+++
T Consensus 190 ~~~~~~~~~~~~l~~~g~~~---~~~~~~~~~~~~~~~l~~~Gf~ 231 (254)
T 2h00_A 190 FVKRIIHDSLQLKKRLRWYS---CMLGKKCSLAPLKEELRIQGVP 231 (254)
T ss_dssp HHHHHHHHHHHHGGGBSCEE---EEESSTTSHHHHHHHHHHTTCS
T ss_pred EEHHHHHHHHhcccceEEEE---ECCCChhHHHHHHHHHHHcCCC
Confidence 33444555556678888654 3334455545566677766653
No 315
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=20.99 E-value=1e+02 Score=23.43 Aligned_cols=37 Identities=8% Similarity=0.005 Sum_probs=22.9
Q ss_pred HHHHHHHhhcCCCCCEEEEEcCCCCcccCHHHHHHHHh
Q psy7378 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALR 65 (90)
Q Consensus 28 ~~al~~~~~~lkpgG~lvYsTCS~~~eENE~vV~~~l~ 65 (90)
..+++.+.+.+++|..+|+ ..|+.|.-.+.+.+.+.+
T Consensus 102 ~~v~~~i~~~l~~g~iVV~-~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 102 LDAARSIGRAMSRYILIVT-KSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp HHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCEEEE-eeeCCCcchHHHHHHHHH
Confidence 3444555566787766666 447888777776554433
No 316
>2o1k_A NS28, non-structural glycoprotein NSP4; rotavirus enterotoxin, nonstructural protein, tetramer coiled-coil, virulence, viral protein; 1.67A {Simian rotavirus A} PDB: 2o1j_A 1g1j_A* 1g1i_A* 3miw_B
Probab=20.71 E-value=56 Score=18.38 Aligned_cols=23 Identities=17% Similarity=0.161 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCEE
Q psy7378 20 GKTSLIVILEAIDCLNARSPTGGYL 44 (90)
Q Consensus 20 ~~~Q~~Ll~~al~~~~~~lkpgG~l 44 (90)
.--|.+||.++.+.+. .+|.|.+
T Consensus 26 EiEQVeLL~rIyd~L~--~~~~~~i 48 (52)
T 2o1k_A 26 EIEQVELLKRIYDKLT--VQTTGEI 48 (52)
T ss_dssp HHHHHHHHHHHHHHHH--HC-----
T ss_pred HHHHHHHHHHHHHHHc--cCccccc
Confidence 3458899999998863 4555554
No 317
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=20.55 E-value=1.1e+02 Score=21.94 Aligned_cols=27 Identities=11% Similarity=-0.018 Sum_probs=22.5
Q ss_pred CCCCEEEEEcCCCCcccCHHHHHHHHh
Q psy7378 39 PTGGYLVYSTCSILPEENEAVVNYALR 65 (90)
Q Consensus 39 kpgG~lvYsTCS~~~eENE~vV~~~l~ 65 (90)
.++|.++=.-|.+.++-..+++..+.+
T Consensus 320 ~~~g~I~~~g~gi~~~~~~enl~a~ve 346 (353)
T 1j93_A 320 GKGKHILNLGHGIKVGTPEENFAHFFE 346 (353)
T ss_dssp CSSSEEBCBSSCCCTTCCHHHHHHHHH
T ss_pred CCCCEEEeCCCCCCCCCCHHHHHHHHH
Confidence 458898889999999888888887764
No 318
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=20.04 E-value=2.2e+02 Score=20.25 Aligned_cols=52 Identities=13% Similarity=0.183 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHH--hhcCCC-CCEEEEEcCCCCcccCHHHHHHHHhcCCcEEee
Q psy7378 22 TSLIVILEAIDCL--NARSPT-GGYLVYSTCSILPEENEAVVNYALRKRDVKLVP 73 (90)
Q Consensus 22 ~Q~~Ll~~al~~~--~~~lkp-gG~lvYsTCS~~~eENE~vV~~~l~~~~~~l~~ 73 (90)
..++.|.+.|+.. ...++| |+.+++..|+-.....+++++.+++++++-+.+
T Consensus 331 ~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~ 385 (421)
T 3l8a_A 331 GNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLND 385 (421)
T ss_dssp HHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEE
T ss_pred HHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEEC
Confidence 3345555566543 344555 555555666532234556777766777776655
Done!