Your job contains 1 sequence.
>psy7378
MSNWYPLDSTLALRALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVV
NYALRKRDVKLVPTGLDFGTEGFVNYRQNK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7378
(90 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0033741 - symbol:CG8545 species:7227 "Drosophila m... 255 1.1e-20 1
ZFIN|ZDB-GENE-050309-7 - symbol:nop2 "NOP2 nucleolar prot... 231 3.1e-18 1
UNIPROTKB|F1N3G2 - symbol:NOP2 "Uncharacterized protein" ... 230 4.8e-18 1
UNIPROTKB|E2RCH6 - symbol:NOP2 "Uncharacterized protein" ... 230 4.8e-18 1
RGD|1304616 - symbol:Nop2 "NOP2 nucleolar protein" specie... 227 9.1e-18 1
UNIPROTKB|P46087 - symbol:NOP2 "Putative ribosomal RNA me... 227 9.8e-18 1
UNIPROTKB|F1SLR6 - symbol:NOP2 "Uncharacterized protein" ... 222 3.4e-17 1
TAIR|locus:2178393 - symbol:OLI2 "OLIGOCELLULA 2" species... 219 5.3e-17 1
MGI|MGI:107891 - symbol:Nop2 "NOP2 nucleolar protein" spe... 220 5.3e-17 1
TAIR|locus:2133832 - symbol:AT4G26600 species:3702 "Arabi... 218 6.6e-17 1
UNIPROTKB|F1NH85 - symbol:Gga.5513 "Uncharacterized prote... 212 2.0e-16 1
UNIPROTKB|F1NK16 - symbol:Gga.5513 "Uncharacterized prote... 212 3.3e-16 1
POMBASE|SPBP8B7.20c - symbol:SPBP8B7.20c "RNA methyltrans... 207 8.4e-16 1
WB|WBGene00021073 - symbol:nol-1 species:6239 "Caenorhabd... 207 9.8e-16 1
DICTYBASE|DDB_G0281685 - symbol:nol1 "NOL1/NOP2/Sun famil... 205 1.5e-15 1
CGD|CAL0000046 - symbol:orf19.501 species:5476 "Candida a... 199 6.3e-15 1
ASPGD|ASPL0000013404 - symbol:AN8073 species:162425 "Emer... 193 4.1e-14 1
SGD|S000005005 - symbol:NOP2 "Probable RNA m(5)C methyltr... 180 7.0e-13 1
UNIPROTKB|G4MY77 - symbol:MGG_01292 "Nucleolar protein NO... 163 5.4e-11 1
TAIR|locus:2009170 - symbol:AT1G06560 species:3702 "Arabi... 109 2.8e-05 1
TIGR_CMR|CBU_1915 - symbol:CBU_1915 "Sun protein" species... 107 2.9e-05 1
UNIPROTKB|Q749J3 - symbol:GSU2749 "NOL1/NOP2/Sun (TRNA an... 89 5.2e-05 2
TIGR_CMR|GSU_2749 - symbol:GSU_2749 "NOL1/NOP2/sun family... 89 5.2e-05 2
UNIPROTKB|Q9V106 - symbol:PYRAB06230 "tRNA (cytosine(49)-... 100 9.8e-05 1
UNIPROTKB|P36929 - symbol:rsmB "16S rRNA m5C967 methyltra... 99 0.00021 1
TIGR_CMR|CHY_1481 - symbol:CHY_1481 "sun protein" species... 99 0.00022 1
DICTYBASE|DDB_G0290553 - symbol:DDB_G0290553 "PUA domain-... 99 0.00026 1
UNIPROTKB|Q60343 - symbol:trm4 "tRNA (cytosine(48)-C(5))-... 94 0.00035 1
>FB|FBgn0033741 [details] [associations]
symbol:CG8545 species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
EMBL:AE013599 GO:GO:0003723 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 KO:K14835 TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:BT088930 RefSeq:NP_610786.2
UniGene:Dm.2211 SMR:A1Z909 IntAct:A1Z909 STRING:A1Z909
EnsemblMetazoa:FBtr0087934 GeneID:36365 KEGG:dme:Dmel_CG8545
UCSC:CG8545-RA FlyBase:FBgn0033741 InParanoid:A1Z909 OMA:IMTGFDR
OrthoDB:EOG4GB5N7 GenomeRNAi:36365 NextBio:798159 Uniprot:A1Z909
Length = 891
Score = 255 (94.8 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 45/65 (69%), Positives = 58/65 (89%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AIDC +A+S TGGY+VYSTCS+LPEENE V++YAL+KR+VKLVPTGLDFG EGF
Sbjct: 545 LLLTAIDCTDAKSSTGGYIVYSTCSVLPEENEWVIDYALKKRNVKLVPTGLDFGVEGFTK 604
Query: 86 YRQNK 90
+RQ++
Sbjct: 605 FRQHR 609
>ZFIN|ZDB-GENE-050309-7 [details] [associations]
symbol:nop2 "NOP2 nucleolar protein homolog (yeast)"
species:7955 "Danio rerio" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 ZFIN:ZDB-GENE-050309-7
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 CTD:4839
KO:K14835 TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341
EMBL:CR936322 IPI:IPI00898205 RefSeq:XP_001922354.1
UniGene:Dr.159549 UniGene:Dr.77944 Ensembl:ENSDART00000114272
Ensembl:ENSDART00000130222 GeneID:321130 KEGG:dre:321130
NextBio:20807245 Uniprot:F1QWP7
Length = 739
Score = 231 (86.4 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 44/65 (67%), Positives = 54/65 (83%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
+IL AID +NA S TGGYLVY TCSI+ EENE VV+YAL+KR+VKLVPTGLDFG EGF
Sbjct: 492 LILSAIDSVNADSQTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGKEGFTR 551
Query: 86 YRQNK 90
+++ +
Sbjct: 552 FKEKR 556
>UNIPROTKB|F1N3G2 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:DAAA02014463 IPI:IPI00717832
UniGene:Bt.53770 Ensembl:ENSBTAT00000019607 Uniprot:F1N3G2
Length = 820
Score = 230 (86.0 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 43/65 (66%), Positives = 54/65 (83%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID +NA S TGGYLVY TCSI+ EENE VV+YAL+KR+V+LVPTGLDFG EGF
Sbjct: 495 LLLSAIDSVNATSKTGGYLVYCTCSIMVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTR 554
Query: 86 YRQNK 90
+R+ +
Sbjct: 555 FRERR 559
>UNIPROTKB|E2RCH6 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:AAEX03015287
Ensembl:ENSCAFT00000023862 Uniprot:E2RCH6
Length = 826
Score = 230 (86.0 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 43/65 (66%), Positives = 54/65 (83%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID +NA S TGGYLVY TCSI+ EENE VV+YAL+KR+V+LVPTGLDFG EGF
Sbjct: 506 LLLSAIDSVNATSKTGGYLVYCTCSIMVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTR 565
Query: 86 YRQNK 90
+R+ +
Sbjct: 566 FRERR 570
>RGD|1304616 [details] [associations]
symbol:Nop2 "NOP2 nucleolar protein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
RGD:1304616 GO:GO:0005730 GO:GO:0003723 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 OrthoDB:EOG4RJG1H GeneTree:ENSGT00660000095341
IPI:IPI00554155 PRIDE:D4ACW1 Ensembl:ENSRNOT00000024938
UCSC:RGD:1304616 Uniprot:D4ACW1
Length = 772
Score = 227 (85.0 bits), Expect = 9.1e-18, P = 9.1e-18
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID +NA S TGGYLVY TCSI EENE VV+YAL+KR+V+LVPTGLDFG EGF
Sbjct: 474 LLLSAIDSVNAASKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTR 533
Query: 86 YRQNK 90
+R+ +
Sbjct: 534 FRERR 538
>UNIPROTKB|P46087 [details] [associations]
symbol:NOP2 "Putative ribosomal RNA methyltransferase NOP2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005730 GO:GO:0008284 GO:GO:0003723 GO:GO:0032259
GO:GO:0006364 EMBL:AC006064 GO:GO:0008757 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 EMBL:M32110
EMBL:M33132 EMBL:X55504 EMBL:AK056208 EMBL:BC082985 EMBL:BC000656
EMBL:BC065257 EMBL:BC106072 EMBL:BC128183 EMBL:BC128184
IPI:IPI00294891 IPI:IPI00872909 PIR:A48168 RefSeq:NP_001028886.1
RefSeq:NP_001245237.1 RefSeq:NP_001245238.1 RefSeq:NP_001245239.1
RefSeq:NP_006161.2 UniGene:Hs.534334 ProteinModelPortal:P46087
SMR:P46087 IntAct:P46087 MINT:MINT-1137742 STRING:P46087
PhosphoSite:P46087 DMDM:146289861 SWISS-2DPAGE:P46087 PaxDb:P46087
PRIDE:P46087 Ensembl:ENST00000322166 Ensembl:ENST00000382421
Ensembl:ENST00000399466 Ensembl:ENST00000537442
Ensembl:ENST00000541778 Ensembl:ENST00000545200 GeneID:4839
KEGG:hsa:4839 UCSC:uc021qtw.1 CTD:4839 GeneCards:GC12M006666
HGNC:HGNC:7867 HPA:HPA040119 MIM:164031 neXtProt:NX_P46087
PharmGKB:PA164724026 HOGENOM:HOG000224258 HOVERGEN:HBG082043
KO:K14835 OMA:DLQRVHK ChiTaRS:NOP2 GenomeRNAi:4839 NextBio:18646
ArrayExpress:P46087 Bgee:P46087 CleanEx:HS_NOP2
Genevestigator:P46087 GermOnline:ENSG00000111641 InterPro:IPR012586
Pfam:PF08062 TIGRFAMs:TIGR00446 Uniprot:P46087
Length = 812
Score = 227 (85.0 bits), Expect = 9.8e-18, P = 9.8e-18
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID +NA S TGGYLVY TCSI EENE VV+YAL+KR+V+LVPTGLDFG EGF
Sbjct: 494 LLLSAIDSVNATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTR 553
Query: 86 YRQNK 90
+R+ +
Sbjct: 554 FRERR 558
>UNIPROTKB|F1SLR6 [details] [associations]
symbol:NOP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730 GO:GO:0003723
GO:GO:0032259 GO:GO:0006364 GO:GO:0008757 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 CTD:4839 KO:K14835 OMA:DLQRVHK
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:CU914489
RefSeq:NP_001231175.1 UniGene:Ssc.5041 Ensembl:ENSSSCT00000000758
GeneID:100516080 KEGG:ssc:100516080 Uniprot:F1SLR6
Length = 821
Score = 222 (83.2 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 42/65 (64%), Positives = 53/65 (81%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID ++A S TGGYLVY TCSI EENE VV+YAL+KR+V+LVPTGLDFG EGF
Sbjct: 493 LLLSAIDSVSATSKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTR 552
Query: 86 YRQNK 90
+R+ +
Sbjct: 553 FRERR 557
>TAIR|locus:2178393 [details] [associations]
symbol:OLI2 "OLIGOCELLULA 2" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0005829 EMBL:CP002688 GO:GO:0008283 GO:GO:0003723
GO:GO:0009965 GO:GO:0006364 GO:GO:0008757 EMBL:AB026659
GO:GO:0010015 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 OMA:LIYANEM
HSSP:O50082 ProtClustDB:CLSN2690331 IPI:IPI00527551
RefSeq:NP_850927.1 UniGene:At.43081 ProteinModelPortal:Q9FG73
SMR:Q9FG73 STRING:Q9FG73 PRIDE:Q9FG73 EnsemblPlants:AT5G55920.1
GeneID:835690 KEGG:ath:AT5G55920 TAIR:At5g55920 InParanoid:Q9FG73
PhylomeDB:Q9FG73 Genevestigator:Q9FG73 Uniprot:Q9FG73
Length = 682
Score = 219 (82.2 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 40/65 (61%), Positives = 54/65 (83%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID ++A S TGGY+VYSTCSI+ ENEAV++YAL+KRDVKLV GLDFG +GF
Sbjct: 471 LLLAAIDMVDANSKTGGYIVYSTCSIMVTENEAVIDYALKKRDVKLVTCGLDFGRKGFTR 530
Query: 86 YRQNK 90
+R+++
Sbjct: 531 FREHR 535
>MGI|MGI:107891 [details] [associations]
symbol:Nop2 "NOP2 nucleolar protein" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 MGI:MGI:107891
GO:GO:0005730 GO:GO:0003723 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 HOVERGEN:HBG082043 ChiTaRS:NOP2
InterPro:IPR012586 Pfam:PF08062 TIGRFAMs:TIGR00446 EMBL:BC007151
EMBL:AK154006 IPI:IPI00311453 PIR:A48998 UniGene:Mm.29203
HSSP:Q96P11 ProteinModelPortal:Q922K7 SMR:Q922K7 STRING:Q922K7
PhosphoSite:Q922K7 PaxDb:Q922K7 PRIDE:Q922K7 UCSC:uc009dtn.2
InParanoid:Q922K7 OrthoDB:EOG4RJG1H Genevestigator:Q922K7
Uniprot:Q922K7
Length = 793
Score = 220 (82.5 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 42/65 (64%), Positives = 52/65 (80%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID +NA S TGGYLVY TCSI EENE VV+YAL+KR+V+LVPTGLDFG EGF
Sbjct: 479 LLLSAIDSVNAASKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTR 538
Query: 86 YRQNK 90
++ +
Sbjct: 539 FQARR 543
>TAIR|locus:2133832 [details] [associations]
symbol:AT4G26600 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=RCA] InterPro:IPR011023
InterPro:IPR018314 InterPro:IPR023273 PRINTS:PR02012
PROSITE:PS01153 Pfam:PF01189 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005730 GO:GO:0003723 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446
HSSP:O50082 OMA:SANLHRM EMBL:AY070425 EMBL:AY133836 IPI:IPI00533545
RefSeq:NP_194390.2 UniGene:At.28358 ProteinModelPortal:Q8VYM6
SMR:Q8VYM6 STRING:Q8VYM6 PaxDb:Q8VYM6 PRIDE:Q8VYM6
EnsemblPlants:AT4G26600.1 GeneID:828767 KEGG:ath:AT4G26600
TAIR:At4g26600 InParanoid:Q8VYM6 PhylomeDB:Q8VYM6
ProtClustDB:CLSN2690331 Genevestigator:Q8VYM6 Uniprot:Q8VYM6
Length = 671
Score = 218 (81.8 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 40/65 (61%), Positives = 54/65 (83%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
+IL AID ++A S TGGY+VYSTCS++ ENEAV++YAL+ RDVKLVP GLDFG GF +
Sbjct: 454 LILGAIDLVDANSKTGGYIVYSTCSVMIPENEAVIDYALKNRDVKLVPCGLDFGRPGFSS 513
Query: 86 YRQNK 90
+R+++
Sbjct: 514 FREHR 518
>UNIPROTKB|F1NH85 [details] [associations]
symbol:Gga.5513 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:AADN02061143
IPI:IPI00822637 Ensembl:ENSGALT00000023326 ArrayExpress:F1NH85
Uniprot:F1NH85
Length = 549
Score = 212 (79.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID +NA S TGGY+VY TCSI EENE VV+YAL+KR+V+LV TGLDFG EGF
Sbjct: 459 LLLSAIDSVNATSETGGYIVYCTCSITVEENEWVVDYALKKRNVRLVATGLDFGKEGFTR 518
Query: 86 YRQNK 90
++ +
Sbjct: 519 FKDRR 523
>UNIPROTKB|F1NK16 [details] [associations]
symbol:Gga.5513 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005730
GO:GO:0003723 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 OMA:DLQRVHK
TIGRFAMs:TIGR00446 GeneTree:ENSGT00660000095341 EMBL:AADN02061143
IPI:IPI00575969 Ensembl:ENSGALT00000037120 ArrayExpress:F1NK16
Uniprot:F1NK16
Length = 722
Score = 212 (79.7 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
++L AID +NA S TGGY+VY TCSI EENE VV+YAL+KR+V+LV TGLDFG EGF
Sbjct: 535 LLLSAIDSVNATSETGGYIVYCTCSITVEENEWVVDYALKKRNVRLVATGLDFGKEGFTR 594
Query: 86 YRQNK 90
++ +
Sbjct: 595 FKDRR 599
>POMBASE|SPBP8B7.20c [details] [associations]
symbol:SPBP8B7.20c "RNA methyltransferase Nop2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0008173 "RNA methyltransferase activity"
evidence=ISO] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0031167 "rRNA
methylation" evidence=ISO] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153
PomBase:SPBP8B7.20c Pfam:PF01189 GO:GO:0005730 EMBL:CU329671
GO:GO:0003723 GO:GO:0008173 GO:GO:0008757 GO:GO:0031167
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 HSSP:Q96P11
PIR:T40814 RefSeq:NP_596527.1 ProteinModelPortal:O94268
STRING:O94268 PRIDE:O94268 EnsemblFungi:SPBP8B7.20c.1
GeneID:2541274 KEGG:spo:SPBP8B7.20c OMA:TRMLEIV OrthoDB:EOG40S3Q1
NextBio:20802386 Uniprot:O94268
Length = 608
Score = 207 (77.9 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 14 RALSTIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLV 72
R T+ ++L AID +NA S TGG++VYSTCSI +E+EAV+ YAL+KR +VKLV
Sbjct: 438 RDFDTLSHLQRQLLLSAIDSVNADSKTGGFIVYSTCSITVDEDEAVIQYALKKRPNVKLV 497
Query: 73 PTGLDFGTEGFVNYRQNK 90
TGL+FG EGF +R+ +
Sbjct: 498 STGLEFGREGFTRFREKR 515
>WB|WBGene00021073 [details] [associations]
symbol:nol-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040019 "positive regulation of embryonic
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0000003 GO:GO:0003723 GO:GO:0040039 GO:GO:0040015
GO:GO:0040019 GO:GO:0032259 GO:GO:0006364 GO:GO:0008757
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446
GeneTree:ENSGT00660000095341 EMBL:FO081752 HSSP:O50082 PIR:D88022
PIR:T33803 RefSeq:NP_493742.1 ProteinModelPortal:Q9TYV5 SMR:Q9TYV5
STRING:Q9TYV5 PaxDb:Q9TYV5 EnsemblMetazoa:W07E6.1 GeneID:173437
KEGG:cel:CELE_W07E6.1 UCSC:W07E6.1 CTD:173437 WormBase:W07E6.1
InParanoid:Q9TYV5 OMA:SANLHRM NextBio:879655 Uniprot:Q9TYV5
Length = 664
Score = 207 (77.9 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGTEGFVN 85
+IL A+D L+A SP GGYLVYSTCS+L EENEAVVN+ L +R +LVPTGL G +G+
Sbjct: 416 LILSALDSLDANSPNGGYLVYSTCSVLVEENEAVVNFLLERRHCELVPTGLSIGVDGYTR 475
Query: 86 YR 87
+R
Sbjct: 476 FR 477
>DICTYBASE|DDB_G0281685 [details] [associations]
symbol:nol1 "NOL1/NOP2/Sun family protein"
species:44689 "Dictyostelium discoideum" [GO:0032259 "methylation"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011023 InterPro:IPR023273 PRINTS:PR02012
dictyBase:DDB_G0281685 Pfam:PF01189 GenomeReviews:CM000152_GR
GO:GO:0003723 EMBL:AAFI02000042 GO:GO:0032259 GO:GO:0006364
GO:GO:0008757 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 KO:K14835 TIGRFAMs:TIGR00446 RefSeq:XP_640577.1
ProteinModelPortal:Q54TL4 STRING:Q54TL4 EnsemblProtists:DDB0237575
GeneID:8623185 KEGG:ddi:DDB_G0281685 InParanoid:Q54TL4 OMA:IEYLAGH
ProtClustDB:CLSZ2846781 Uniprot:Q54TL4
Length = 647
Score = 205 (77.2 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 18 TIGKTSLIVILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLD 77
T T ++L+AID ++A SPTGG +VYSTCS+ EENEAVV+YALR RDV +V T ++
Sbjct: 460 TCTHTQKELLLKAIDSVDASSPTGGIIVYSTCSLTVEENEAVVDYALRNRDVIVVDTTIE 519
Query: 78 FGTEGFVNYRQNK 90
FG +GF ++R+++
Sbjct: 520 FGVDGFTSFRESR 532
>CGD|CAL0000046 [details] [associations]
symbol:orf19.501 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 CGD:CAL0000046
Pfam:PF01189 GO:GO:0003723 GO:GO:0032259 EMBL:AACQ01000055
EMBL:AACQ01000054 GO:GO:0006364 GO:GO:0008757 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 KO:K14835
TIGRFAMs:TIGR00446 RefSeq:XP_717364.1 RefSeq:XP_717453.1
ProteinModelPortal:Q5A6Q3 STRING:Q5A6Q3 GeneID:3640912
GeneID:3640977 KEGG:cal:CaO19.501 KEGG:cal:CaO19.8131
Uniprot:Q5A6Q3
Length = 618
Score = 199 (75.1 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 41/63 (65%), Positives = 50/63 (79%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTGLDFGTEGFV 84
++L AID ++A S TGG +VYSTCSI +ENEAVV+YALRKR +VKLV TGL G EGF
Sbjct: 459 LLLSAIDSVDAHSSTGGVIVYSTCSIAVDENEAVVDYALRKRPNVKLVDTGLTIGKEGFT 518
Query: 85 NYR 87
+YR
Sbjct: 519 SYR 521
>ASPGD|ASPL0000013404 [details] [associations]
symbol:AN8073 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent
methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR011023 InterPro:IPR018314
InterPro:IPR023273 PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189
GO:GO:0003723 EMBL:BN001302 GO:GO:0030687 GO:GO:0006364
GO:GO:0008757 EMBL:AACD01000139 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000224258 KO:K14835
TIGRFAMs:TIGR00446 OrthoDB:EOG40S3Q1 RefSeq:XP_681342.1
ProteinModelPortal:Q5AUF7 STRING:Q5AUF7
EnsemblFungi:CADANIAT00004099 GeneID:2869314 KEGG:ani:AN8073.2
OMA:LEPVGKW Uniprot:Q5AUF7
Length = 788
Score = 193 (73.0 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 40/63 (63%), Positives = 49/63 (77%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTGL-DFGTEGF 83
++L AID +N S TGGY+VYSTCS+ EENEAVV Y L+KR +VKLV TGL DFG+ GF
Sbjct: 500 LLLAAIDSVNHASKTGGYIVYSTCSVTVEENEAVVQYVLKKRPNVKLVETGLGDFGSPGF 559
Query: 84 VNY 86
+Y
Sbjct: 560 THY 562
>SGD|S000005005 [details] [associations]
symbol:NOP2 "Probable RNA m(5)C methyltransferase"
species:4932 "Saccharomyces cerevisiae" [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;TAS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;TAS] [GO:0008173
"RNA methyltransferase activity" evidence=TAS] [GO:0030687
"preribosome, large subunit precursor" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 SGD:S000005005 Pfam:PF01189
GO:GO:0005730 EMBL:BK006947 GO:GO:0003723 GO:GO:0030687 EMBL:U12141
GO:GO:0006364 GO:GO:0008173 GO:GO:0008757 RefSeq:NP_014345.3
GeneID:855674 KEGG:sce:YNL053W KO:K11240 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 KO:K14835 TIGRFAMs:TIGR00446 OrthoDB:EOG40S3Q1
EMBL:X82656 EMBL:Z71337 EMBL:AY693060 EMBL:X83512 PIR:A55188
RefSeq:NP_014338.3 ProteinModelPortal:P40991 SMR:P40991
DIP:DIP-6488N IntAct:P40991 MINT:MINT-612803 STRING:P40991
PaxDb:P40991 PeptideAtlas:P40991 EnsemblFungi:YNL061W GeneID:855664
KEGG:sce:YNL061W CYGD:YNL061w GeneTree:ENSGT00660000095341
OMA:LIYANEM NextBio:979935 Genevestigator:P40991 GermOnline:YNL061W
Uniprot:P40991
Length = 618
Score = 180 (68.4 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 37/66 (56%), Positives = 48/66 (72%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTGLDFGTEGFV 84
++L AID ++ S GG +VYSTCS+ EE+EAV++YALRKR +VKLV TGL G E F
Sbjct: 455 LLLSAIDSVDCNSKHGGVIVYSTCSVAVEEDEAVIDYALRKRPNVKLVDTGLAIGKEAFT 514
Query: 85 NYRQNK 90
+YR K
Sbjct: 515 SYRGKK 520
>UNIPROTKB|G4MY77 [details] [associations]
symbol:MGG_01292 "Nucleolar protein NOP2" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011023 InterPro:IPR018314 InterPro:IPR023273
PRINTS:PR02012 PROSITE:PS01153 Pfam:PF01189 GO:GO:0003723
GO:GO:0030687 GO:GO:0032259 EMBL:CM001232 GO:GO:0006364
GO:GO:0008757 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
KO:K14835 TIGRFAMs:TIGR00446 RefSeq:XP_003714215.1
ProteinModelPortal:G4MY77 EnsemblFungi:MGG_01292T0 GeneID:2679573
KEGG:mgr:MGG_01292 Uniprot:G4MY77
Length = 678
Score = 163 (62.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 26 VILEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKR-DVKLVPTGLDFGTEGFV 84
++L AID + GGY+VYSTCS+ EENE VVNYAL +R +V+L+ TGL FG EGF
Sbjct: 498 LLLAAIDA----TKVGGYIVYSTCSVTVEENEQVVNYALSRRSNVELLETGLPFGKEGFT 553
Query: 85 NYRQNK 90
++ K
Sbjct: 554 SFMGKK 559
>TAIR|locus:2009170 [details] [associations]
symbol:AT1G06560 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR002478
InterPro:IPR018314 Pfam:PF01472 PROSITE:PS01153 PROSITE:PS50890
SMART:SM00359 Pfam:PF01189 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003723 GO:GO:0008168 GO:GO:0032259 InterPro:IPR015947
SUPFAM:SSF88697 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 HOGENOM:HOG000224258 OMA:DTEGEPP
HSSP:O50082 EMBL:BT006450 EMBL:AK227718 IPI:IPI00527095
RefSeq:NP_172143.3 UniGene:At.48158 UniGene:At.71039
ProteinModelPortal:Q84MA1 SMR:Q84MA1 STRING:Q84MA1 PaxDb:Q84MA1
PRIDE:Q84MA1 EnsemblPlants:AT1G06560.1 GeneID:837167
KEGG:ath:AT1G06560 TAIR:At1g06560 InParanoid:Q84MA1
PhylomeDB:Q84MA1 ProtClustDB:CLSN2680685 Genevestigator:Q84MA1
Uniprot:Q84MA1
Length = 599
Score = 109 (43.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/45 (57%), Positives = 28/45 (62%)
Query: 41 GGYLVYSTCSILPEENEAVVNYALRK-RDVKLVPTGLDFGTEGFV 84
GG LVYSTC+I P ENEAVV YAL K R + L P G G V
Sbjct: 508 GGILVYSTCTINPSENEAVVRYALDKYRFLSLAPQHPRIGGPGLV 552
>TIGR_CMR|CBU_1915 [details] [associations]
symbol:CBU_1915 "Sun protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0000154 "rRNA modification" evidence=ISS]
[GO:0008649 "rRNA methyltransferase activity" evidence=ISS]
InterPro:IPR004573 InterPro:IPR006027 InterPro:IPR018314
Pfam:PF01029 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0006355 GO:GO:0003723 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0031167 GO:GO:0008649 eggNOG:COG0144 InterPro:IPR001678
InterPro:IPR023267 PRINTS:PR02008 Gene3D:1.10.940.10
SUPFAM:SSF48013 EMBL:U10529 PIR:I40649 RefSeq:NP_820892.1
ProteinModelPortal:P45679 GeneID:1209828 KEGG:cbu:CBU_1915
PATRIC:17932565 HOGENOM:HOG000037300 KO:K03500 OMA:KPPMWLR
ProtClustDB:PRK10901 BioCyc:CBUR227377:GJ7S-1889-MONOMER
TIGRFAMs:TIGR00563 Uniprot:P45679
Length = 430
Score = 107 (42.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRKRD-VKLVPTGLDFGTE 81
L+ ++ L GG+L+YSTCS+LP+ENE V+ L D V+L PT + G +
Sbjct: 350 LQLLNALWTVLKAGGFLLYSTCSVLPDENEKVIEEFLSTHDKVELSPTNVHGGLQ 404
>UNIPROTKB|Q749J3 [details] [associations]
symbol:GSU2749 "NOL1/NOP2/Sun (TRNA and rRNA
cytosine-C5-methyltransferase) family protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF01189 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008168
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 OMA:YSEEVRK RefSeq:NP_953794.1
ProteinModelPortal:Q749J3 GeneID:2685973 KEGG:gsu:GSU2749
PATRIC:22028341 ProtClustDB:CLSK2761235
BioCyc:GSUL243231:GH27-2740-MONOMER Uniprot:Q749J3
Length = 319
Score = 89 (36.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 34 LNARSPTGGYLVYSTCSILPEENEAVVNYALRK 66
L A P GG L+Y TCS PEENE +VN LR+
Sbjct: 230 LEALRP-GGLLLYCTCSFSPEENELIVNDVLRR 261
Score = 32 (16.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 3 NWYPLDSTL 11
+WYPL T+
Sbjct: 68 SWYPLAFTV 76
>TIGR_CMR|GSU_2749 [details] [associations]
symbol:GSU_2749 "NOL1/NOP2/sun family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF01189 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008168 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
HOGENOM:HOG000224258 OMA:YSEEVRK RefSeq:NP_953794.1
ProteinModelPortal:Q749J3 GeneID:2685973 KEGG:gsu:GSU2749
PATRIC:22028341 ProtClustDB:CLSK2761235
BioCyc:GSUL243231:GH27-2740-MONOMER Uniprot:Q749J3
Length = 319
Score = 89 (36.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 34 LNARSPTGGYLVYSTCSILPEENEAVVNYALRK 66
L A P GG L+Y TCS PEENE +VN LR+
Sbjct: 230 LEALRP-GGLLLYCTCSFSPEENELIVNDVLRR 261
Score = 32 (16.3 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 5/9 (55%), Positives = 7/9 (77%)
Query: 3 NWYPLDSTL 11
+WYPL T+
Sbjct: 68 SWYPLAFTV 76
>UNIPROTKB|Q9V106 [details] [associations]
symbol:PYRAB06230 "tRNA
(cytosine(49)-C(5))-methyltransferase" species:272844 "Pyrococcus
abyssi GE5" [GO:0000049 "tRNA binding" evidence=IDA] [GO:0016428
"tRNA (cytosine-5-)-methyltransferase activity" evidence=IDA]
[GO:0030488 "tRNA methylation" evidence=IDA] InterPro:IPR011023
PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737 GO:GO:0000049
EMBL:HE613800 GenomeReviews:AL096836_GR GO:GO:0006364
eggNOG:COG0144 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 HOGENOM:HOG000224258 TIGRFAMs:TIGR00446
EMBL:AJ248284 PIR:B75183 RefSeq:NP_126314.1 HSSP:O50082
ProteinModelPortal:Q9V106 EnsemblBacteria:EBPYRT00000003778
GeneID:1495530 KEGG:pab:PAB1947 OMA:ENTFDRV ProtClustDB:CLSK541567
Uniprot:Q9V106
Length = 311
Score = 100 (40.3 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 41 GGYLVYSTCSILPEENEAVVNYALRKRDVKLVPTGLDFGT-EGFVNYRQNK 90
GG LVYSTC++ P ENE VV++ L+K D KL L T E + + K
Sbjct: 231 GGVLVYSTCTVDPLENEEVVDFLLQKTDAKLEKVKLPLKTSEPVIEWEGRK 281
>UNIPROTKB|P36929 [details] [associations]
symbol:rsmB "16S rRNA m5C967 methyltransferase"
species:83333 "Escherichia coli K-12" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0070475 "rRNA base
methylation" evidence=IMP] [GO:0009383 "rRNA
(cytosine-C5-)-methyltransferase activity" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_01856 InterPro:IPR004573 InterPro:IPR006027
InterPro:IPR018314 InterPro:IPR023541 Pfam:PF01029 PROSITE:PS01153
Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U18997
GO:GO:0003723 EMBL:X77091 EMBL:Y10307 GO:GO:0070475 EMBL:X52114
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 GO:GO:0009383
HOGENOM:HOG000037300 KO:K03500 OMA:KPPMWLR ProtClustDB:PRK10901
TIGRFAMs:TIGR00563 PIR:D65121 RefSeq:NP_417747.1 RefSeq:YP_492144.1
PDB:1J4F PDB:1SQF PDB:1SQG PDBsum:1J4F PDBsum:1SQF PDBsum:1SQG
ProteinModelPortal:P36929 SMR:P36929 DIP:DIP-10946N IntAct:P36929
PRIDE:P36929 EnsemblBacteria:EBESCT00000000406
EnsemblBacteria:EBESCT00000016126 GeneID:12934442 GeneID:947789
KEGG:ecj:Y75_p3888 KEGG:eco:b3289 PATRIC:32122010 EchoBASE:EB2082
EcoGene:EG12163 BioCyc:EcoCyc:EG12163-MONOMER
BioCyc:ECOL316407:JW3250-MONOMER BioCyc:MetaCyc:EG12163-MONOMER
EvolutionaryTrace:P36929 Genevestigator:P36929 Uniprot:P36929
Length = 429
Score = 99 (39.9 bits), Expect = 0.00021, P = 0.00021
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 29 EAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYAL-RKRDVKLVPTG 75
E +D + TGG LVY+TCS+LPEEN + L R D +L TG
Sbjct: 355 EILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETG 402
>TIGR_CMR|CHY_1481 [details] [associations]
symbol:CHY_1481 "sun protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0000154 "rRNA
modification" evidence=ISS] [GO:0008649 "rRNA methyltransferase
activity" evidence=ISS] InterPro:IPR004573 InterPro:IPR006027
Pfam:PF01029 Pfam:PF01189 GO:GO:0005737 GO:GO:0006355 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0031167 GO:GO:0008649
eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008
Gene3D:1.10.940.10 SUPFAM:SSF48013 HOGENOM:HOG000037300 KO:K03500
OMA:KPPMWLR TIGRFAMs:TIGR00563 RefSeq:YP_360313.1
ProteinModelPortal:Q3AC21 STRING:Q3AC21 GeneID:3726975
KEGG:chy:CHY_1481 PATRIC:21276093
BioCyc:CHYD246194:GJCN-1480-MONOMER Uniprot:Q3AC21
Length = 440
Score = 99 (39.9 bits), Expect = 0.00022, P = 0.00022
Identities = 23/39 (58%), Positives = 25/39 (64%)
Query: 28 LEAIDCLNARSPTGGYLVYSTCSILPEENEAVVNYALRK 66
LE + L+ P G LVYSTCSI PEENE VV LRK
Sbjct: 357 LEILTNLSKLLPPEGILVYSTCSIEPEENEGVVENFLRK 395
>DICTYBASE|DDB_G0290553 [details] [associations]
symbol:DDB_G0290553 "PUA domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002478 PROSITE:PS50890
dictyBase:DDB_G0290553 Pfam:PF01189 GO:GO:0003723
InterPro:IPR015947 SUPFAM:SSF88697 EMBL:AAFI02000164 eggNOG:COG0144
InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 OMA:DTEGEPP
RefSeq:XP_635647.1 ProteinModelPortal:Q54FX0
EnsemblProtists:DDB0304591 GeneID:8627719 KEGG:ddi:DDB_G0290553
InParanoid:Q54FX0 ProtClustDB:CLSZ2429656 Uniprot:Q54FX0
Length = 501
Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 41 GGYLVYSTCSILPEENEAVVNYALRKR-DVKLVP 73
GG LVYSTCSI PEENE V+Y L ++KL+P
Sbjct: 420 GGILVYSTCSINPEENELNVSYLLNNYPEMKLIP 453
>UNIPROTKB|Q60343 [details] [associations]
symbol:trm4 "tRNA (cytosine(48)-C(5))-methyltransferase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0016428
"tRNA (cytosine-5-)-methyltransferase activity" evidence=IDA]
[GO:0030488 "tRNA methylation" evidence=IDA] InterPro:IPR011023
InterPro:IPR018314 PROSITE:PS01153 Pfam:PF01189 GO:GO:0005737
GO:GO:0003723 EMBL:L77117 GenomeReviews:L77117_GR GO:GO:0006364
eggNOG:COG0144 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267
PRINTS:PR02008 TIGRFAMs:TIGR00446 PIR:B64303 RefSeq:NP_246989.1
PDB:3A4T PDB:3AJD PDBsum:3A4T PDBsum:3AJD ProteinModelPortal:Q60343
GeneID:1450864 KEGG:mja:MJ_0026 OMA:NEPFFIA ProtClustDB:CLSK876038
EvolutionaryTrace:Q60343 Uniprot:Q60343
Length = 274
Score = 94 (38.1 bits), Expect = 0.00035, P = 0.00035
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 42 GYLVYSTCSILPEENEAVVNYALRKR-DVKLV 72
G LVYSTCS+ EENE V+ Y L+KR DV+L+
Sbjct: 205 GELVYSTCSMEVEENEEVIKYILQKRNDVELI 236
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 90 90 0.00091 102 3 11 22 0.49 29
29 0.39 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 541 (58 KB)
Total size of DFA: 106 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.38u 0.08s 10.46t Elapsed: 00:00:03
Total cpu time: 10.39u 0.08s 10.47t Elapsed: 00:00:03
Start: Thu Aug 15 10:58:42 2013 End: Thu Aug 15 10:58:45 2013