BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7387
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBG5|BAG2_BOVIN BAG family molecular chaperone regulator 2 OS=Bos taurus PE=2 SV=1
Length = 211
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 98/168 (58%), Gaps = 2/168 (1%)
Query: 29 HLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDR 88
LL LDQ+E VE LR+ A+ +E EK+ +L IH+++N + I D +++++ +R
Sbjct: 27 RLLESLDQLELRVEALREAATAVEQEKEVLLEMIHSIQNSQDMRQISDGEREELNLTANR 86
Query: 89 ISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSS 148
+ R T++V V T+RS Q ESL +ID ++ + ++ +S +ACSS
Sbjct: 87 LMGRTLTVEVSVETIRSPQQQESLKHATRIIDEVVSKFLDDLGNARSHLMSLYSACSSEV 146
Query: 149 TVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWKKAIQPMD 196
G D+ F+ V+GCAL+DQK+I++RL LL + E KAI+ ++
Sbjct: 147 PAGPVDQKFQSIVIGCALEDQKKIKRRLETLLRNI--ENADKAIKLLE 192
>sp|Q91YN9|BAG2_MOUSE BAG family molecular chaperone regulator 2 OS=Mus musculus GN=Bag2
PE=1 SV=1
Length = 210
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 89/152 (58%)
Query: 29 HLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDR 88
LL LDQ+E VE LR A+ +E EK+ +L IH+++N + I D +++++ +R
Sbjct: 27 RLLESLDQLELRVEALRDAATAVEQEKEILLEMIHSIQNSQDMRQISDGEREELNLTANR 86
Query: 89 ISLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSS 148
+ R T++V V T+R+ Q ESL +ID ++ + ++ +S +ACSS
Sbjct: 87 LMGRTLTVEVSVETIRNPQQEESLKHATRIIDEVVSKFLDDLGNAKSHLMSLYSACSSEV 146
Query: 149 TVGNGDKTFEHAVLGCALDDQKRIRQRLNGLL 180
G D+ F+ V+GCAL+DQK+I++RL LL
Sbjct: 147 PPGPVDQKFQSIVIGCALEDQKKIKRRLETLL 178
>sp|O95816|BAG2_HUMAN BAG family molecular chaperone regulator 2 OS=Homo sapiens GN=BAG2
PE=1 SV=1
Length = 211
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 30 LLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDRI 89
LL LDQ+E VE LR+ A+ +E EK+ +L IH+++N + I D +++++ +R+
Sbjct: 28 LLESLDQLELRVEALREAATAVEQEKEILLEMIHSIQNSQDMRQISDGEREELNLTANRL 87
Query: 90 SLRCTTIDVCVHTLRSDDQVESLHQVNCLIDNLIIGMRETPEQTQTKCLSYVAACSSSST 149
R T++V V T+R+ Q ESL +ID ++ + ++ +S +ACSS
Sbjct: 88 MGRTLTVEVSVETIRNPQQQESLKHATRIIDEVVNKFLDDLGNAKSHLMSLYSACSSEVP 147
Query: 150 VGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEKWKKAIQPMD 196
G D+ F+ V+GCAL+DQK+I++RL LL + E KAI+ ++
Sbjct: 148 HGPVDQKFQSIVIGCALEDQKKIKRRLETLLRNI--ENSDKAIKLLE 192
>sp|Q46PH8|CHED_CUPPJ Probable chemoreceptor glutamine deamidase CheD OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=cheD PE=3
SV=1
Length = 217
Score = 37.4 bits (85), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 37 VEAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTI 96
+E + EL KM ++ E + ++ L NM +LN IGD + D +LRYL +R
Sbjct: 91 LEVLINELLKMGARRERLEAKVFGGGAVLANMTTLN-IGDRNADFVLRYLKTEEIRVAAQ 149
Query: 97 DV 98
D+
Sbjct: 150 DL 151
>sp|Q1LH12|CHED_RALME Probable chemoreceptor glutamine deamidase CheD OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=cheD PE=3 SV=1
Length = 220
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 2 EVEEAASSNDVHIEEPKDVENDLSLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTT 61
EV N + + ++ D L + +E + EL KM ++ E + ++
Sbjct: 58 EVAGVGGMNHFMLPDDENAGADRMLSTSMRYGCYALEVLINELLKMGARRERLEAKVFGG 117
Query: 62 IHTLKNMDSLNDIGDNDKDDILRYL 86
L NM +LN IGD + D +L+YL
Sbjct: 118 GAVLANMTTLN-IGDRNADFVLKYL 141
>sp|Q9UPX6|K1024_HUMAN UPF0258 protein KIAA1024 OS=Homo sapiens GN=KIAA1024 PE=2 SV=3
Length = 916
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 63 HTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNC 117
HT+K+ D ++I +D DI R+LD +S+ +T + S + LH+ +C
Sbjct: 502 HTMKHSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQSSCYNSTGSLSQLHKSDC 556
>sp|O14096|TGTL_SCHPO Queuine tRNA-ribosyltransferase-like protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC2F3.13c PE=3 SV=4
Length = 649
Score = 31.2 bits (69), Expect = 4.4, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 21 ENDLSLKDHLLGQLDQV------EAHVEELRKMASQLENEKDQILTTIHTLKNMDSLNDI 74
E+D L+D L QLD+ E +E L+K +++E K++ T++N + D
Sbjct: 460 ESDSELEDALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHMQFLTVENEREVMDF 519
Query: 75 GDNDKDDILRYLDRISLRCTTID 97
+ K ++ + +RC ID
Sbjct: 520 TLSSKKVVIHFYHPDFIRCKIID 542
>sp|Q13315|ATM_HUMAN Serine-protein kinase ATM OS=Homo sapiens GN=ATM PE=1 SV=3
Length = 3056
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 135 TKCLSYVAACSSSSTVGNGDKTFEHAVLGCALDDQKRIRQRLNGLLDYMTKEK 187
T CL + + S S+T N D EH C LD K+ ++ + ++DYM ++K
Sbjct: 1871 TSCLRHFSQTSRSTTPANLDSESEH-FFRCCLD--KKSQRTMLAVVDYMRRQK 1920
>sp|Q9C7G0|MA658_ARATH 65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana
GN=MAP65-8 PE=1 SV=2
Length = 562
Score = 30.4 bits (67), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 10 NDVHIEEPKDVENDL-SLKDHLLGQLDQVEAHVEELRKMASQLENEKDQILTTIHTLKNM 68
ND+ ++ ++ +N+L L D +L +V+ ++ +R +++ L E I+T IH ++
Sbjct: 161 NDLSNKKLEEYQNELHRLHDEKNERLQKVDIYICAIRDLSATLGTEASMIITKIHP--SL 218
Query: 69 DSLNDIGDNDKDDILRYLD 87
+ L I N DDIL+ L+
Sbjct: 219 NDLYGISKNISDDILKKLN 237
>sp|Q8K3V7|K1024_MOUSE UPF0258 protein KIAA1024 OS=Mus musculus GN=Kiaa1024 PE=2 SV=1
Length = 917
Score = 30.0 bits (66), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 63 HTLKNMDSLNDIGDNDKDDILRYLDRISLRCTTIDVCVHTLRSDDQVESLHQVNC 117
H +K D ++I +D DI R+LD +S+ +T + S + LH+ +C
Sbjct: 503 HAMKQSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQSSCYNSTGSLSQLHKSDC 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,267,692
Number of Sequences: 539616
Number of extensions: 2878433
Number of successful extensions: 11770
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 11681
Number of HSP's gapped (non-prelim): 167
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)