Query psy7388
Match_columns 224
No_of_seqs 275 out of 1857
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 16:56:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7388.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7388hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 8.4E-38 2.9E-42 297.8 12.5 158 59-220 2-169 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 2.1E-37 7E-42 296.1 12.6 157 58-219 18-188 (583)
3 3t37_A Probable dehydrogenase; 100.0 4.3E-35 1.5E-39 273.2 12.7 154 58-219 16-172 (526)
4 3q9t_A Choline dehydrogenase a 100.0 1.3E-35 4.6E-40 283.2 8.9 149 58-214 5-164 (577)
5 1gpe_A Protein (glucose oxidas 100.0 1.2E-32 4E-37 263.0 13.4 156 58-219 23-192 (587)
6 2jbv_A Choline oxidase; alcoho 100.0 6.4E-31 2.2E-35 248.8 13.8 156 58-220 12-170 (546)
7 1coy_A Cholesterol oxidase; ox 99.9 8.6E-25 2.9E-29 204.9 9.9 127 57-190 9-157 (507)
8 1n4w_A CHOD, cholesterol oxida 99.9 3.1E-24 1.1E-28 200.9 9.6 127 58-190 4-152 (504)
9 1ju2_A HydroxynitrIle lyase; f 99.9 5.7E-24 2E-28 200.8 7.4 119 57-188 24-145 (536)
10 1kdg_A CDH, cellobiose dehydro 99.8 1.6E-19 5.4E-24 170.0 9.3 121 58-189 6-137 (546)
11 3kkj_A Amine oxidase, flavin-c 98.7 1.7E-08 5.9E-13 80.8 5.0 35 59-94 2-36 (336)
12 3oz2_A Digeranylgeranylglycero 98.6 3.5E-08 1.2E-12 86.4 4.4 36 58-94 3-38 (397)
13 3pl8_A Pyranose 2-oxidase; sub 98.4 6E-07 2.1E-11 86.0 7.8 38 57-95 44-81 (623)
14 3dme_A Conserved exported prot 98.3 4.8E-07 1.6E-11 78.6 4.7 35 58-93 3-37 (369)
15 4fk1_A Putative thioredoxin re 98.3 5.6E-07 1.9E-11 77.5 4.8 35 58-93 5-39 (304)
16 4gcm_A TRXR, thioredoxin reduc 98.3 7E-07 2.4E-11 76.8 5.0 35 58-93 5-39 (312)
17 4a5l_A Thioredoxin reductase; 98.3 5.7E-07 2E-11 76.9 4.3 35 58-93 3-37 (314)
18 2oln_A NIKD protein; flavoprot 98.2 7.5E-07 2.6E-11 79.1 4.8 36 58-94 3-38 (397)
19 4gde_A UDP-galactopyranose mut 98.2 6.3E-07 2.2E-11 81.9 4.2 38 58-95 9-46 (513)
20 3dje_A Fructosyl amine: oxygen 98.2 1.2E-06 4.1E-11 79.0 5.3 36 58-94 5-41 (438)
21 3fpz_A Thiazole biosynthetic e 98.2 1.3E-06 4.5E-11 76.2 5.2 38 57-94 63-101 (326)
22 4at0_A 3-ketosteroid-delta4-5a 98.2 1.1E-06 3.8E-11 81.6 4.9 37 57-94 39-75 (510)
23 2bcg_G Secretory pathway GDP d 98.2 1.3E-06 4.6E-11 79.9 5.3 39 56-95 8-46 (453)
24 1ryi_A Glycine oxidase; flavop 98.2 1.5E-06 5E-11 76.5 4.8 37 57-94 15-51 (382)
25 3cgv_A Geranylgeranyl reductas 98.1 1.3E-06 4.5E-11 76.9 4.3 36 58-94 3-38 (397)
26 1c0p_A D-amino acid oxidase; a 98.1 2.1E-06 7.1E-11 75.5 5.3 36 57-93 4-39 (363)
27 3rp8_A Flavoprotein monooxygen 98.1 1.8E-06 6.2E-11 77.1 4.9 38 57-95 21-58 (407)
28 3k7m_X 6-hydroxy-L-nicotine ox 98.1 1.7E-06 5.8E-11 77.6 4.6 33 60-93 2-34 (431)
29 1y56_B Sarcosine oxidase; dehy 98.1 2.1E-06 7.2E-11 75.6 5.1 35 58-93 4-38 (382)
30 2gf3_A MSOX, monomeric sarcosi 98.1 2.2E-06 7.6E-11 75.4 4.8 35 59-94 3-37 (389)
31 3nix_A Flavoprotein/dehydrogen 98.1 2.4E-06 8.2E-11 76.2 4.8 35 58-93 4-38 (421)
32 1yvv_A Amine oxidase, flavin-c 98.1 2.6E-06 8.8E-11 73.5 4.8 35 59-94 2-36 (336)
33 2uzz_A N-methyl-L-tryptophan o 98.1 2E-06 6.7E-11 75.4 3.8 35 59-94 2-36 (372)
34 3p1w_A Rabgdi protein; GDI RAB 98.0 3E-06 1E-10 79.0 5.0 40 55-95 16-55 (475)
35 3ka7_A Oxidoreductase; structu 98.0 3.4E-06 1.2E-10 75.3 4.7 34 60-94 1-34 (425)
36 3v76_A Flavoprotein; structura 98.0 3.5E-06 1.2E-10 76.8 4.9 37 57-94 25-61 (417)
37 3da1_A Glycerol-3-phosphate de 98.0 3.5E-06 1.2E-10 79.6 5.0 35 58-93 17-51 (561)
38 2cul_A Glucose-inhibited divis 98.0 4.4E-06 1.5E-10 69.6 5.0 34 58-92 2-35 (232)
39 3atr_A Conserved archaeal prot 98.0 3E-06 1E-10 77.3 4.2 36 58-94 5-40 (453)
40 2gag_B Heterotetrameric sarcos 98.0 3.2E-06 1.1E-10 74.7 4.3 37 57-93 19-56 (405)
41 1rp0_A ARA6, thiazole biosynth 98.0 4.6E-06 1.6E-10 71.7 5.0 37 58-94 38-74 (284)
42 1v0j_A UDP-galactopyranose mut 98.0 3.6E-06 1.2E-10 75.9 4.6 37 57-94 5-42 (399)
43 2gqf_A Hypothetical protein HI 98.0 3.5E-06 1.2E-10 76.3 4.4 36 58-94 3-38 (401)
44 3nyc_A D-arginine dehydrogenas 98.0 4.2E-06 1.4E-10 73.2 4.3 35 58-94 8-42 (381)
45 1i8t_A UDP-galactopyranose mut 98.0 5.2E-06 1.8E-10 74.1 4.7 35 59-94 1-35 (367)
46 2i0z_A NAD(FAD)-utilizing dehy 98.0 5.7E-06 2E-10 75.5 4.9 36 58-94 25-60 (447)
47 3lad_A Dihydrolipoamide dehydr 98.0 4.5E-06 1.5E-10 76.5 4.3 35 58-93 2-36 (476)
48 2x3n_A Probable FAD-dependent 97.9 7E-06 2.4E-10 73.0 4.8 37 58-95 5-41 (399)
49 3c4n_A Uncharacterized protein 97.9 5.6E-06 1.9E-10 74.4 4.1 36 58-94 35-72 (405)
50 2qcu_A Aerobic glycerol-3-phos 97.9 7.3E-06 2.5E-10 76.0 4.9 35 58-93 2-36 (501)
51 2xdo_A TETX2 protein; tetracyc 97.9 9.3E-06 3.2E-10 72.5 5.4 36 58-94 25-60 (398)
52 3cty_A Thioredoxin reductase; 97.9 8.2E-06 2.8E-10 70.1 4.9 36 56-92 13-48 (319)
53 3i3l_A Alkylhalidase CMLS; fla 97.9 7.7E-06 2.6E-10 77.9 5.1 36 58-94 22-57 (591)
54 3nrn_A Uncharacterized protein 97.9 7.4E-06 2.5E-10 73.4 4.8 33 61-94 2-34 (421)
55 3pvc_A TRNA 5-methylaminomethy 97.9 8.2E-06 2.8E-10 78.6 5.3 35 58-93 263-297 (689)
56 1k0i_A P-hydroxybenzoate hydro 97.9 6.7E-06 2.3E-10 72.9 4.3 35 59-94 2-36 (394)
57 2qa1_A PGAE, polyketide oxygen 97.9 9.2E-06 3.2E-10 75.5 5.5 39 56-95 8-46 (500)
58 1y0p_A Fumarate reductase flav 97.9 6.9E-06 2.4E-10 77.3 4.6 36 58-94 125-160 (571)
59 3o0h_A Glutathione reductase; 97.9 8.1E-06 2.8E-10 75.2 4.9 35 58-93 25-59 (484)
60 3c96_A Flavin-containing monoo 97.9 8.3E-06 2.8E-10 73.1 4.9 36 58-94 3-39 (410)
61 2gmh_A Electron transfer flavo 97.9 6.4E-06 2.2E-10 78.1 4.2 36 58-94 34-75 (584)
62 2rgh_A Alpha-glycerophosphate 97.9 8.7E-06 3E-10 77.0 5.1 35 58-93 31-65 (571)
63 3jsk_A Cypbp37 protein; octame 97.9 7.8E-06 2.7E-10 73.3 4.5 37 58-94 78-115 (344)
64 3itj_A Thioredoxin reductase 1 97.9 7.2E-06 2.5E-10 70.3 4.1 36 57-93 20-55 (338)
65 3e1t_A Halogenase; flavoprotei 97.9 7.8E-06 2.7E-10 75.9 4.5 36 58-94 6-41 (512)
66 3alj_A 2-methyl-3-hydroxypyrid 97.9 9.8E-06 3.4E-10 71.7 4.9 37 58-95 10-46 (379)
67 1s3e_A Amine oxidase [flavin-c 97.9 1E-05 3.4E-10 74.9 5.0 36 58-94 3-38 (520)
68 4dgk_A Phytoene dehydrogenase; 97.9 7.2E-06 2.5E-10 75.0 4.0 33 61-94 3-35 (501)
69 4dna_A Probable glutathione re 97.9 1E-05 3.6E-10 73.9 5.0 35 58-93 4-38 (463)
70 1d5t_A Guanine nucleotide diss 97.9 1.2E-05 4E-10 73.3 5.3 38 57-95 4-41 (433)
71 3l8k_A Dihydrolipoyl dehydroge 97.9 8.9E-06 3E-10 74.5 4.5 35 58-93 3-37 (466)
72 3ps9_A TRNA 5-methylaminomethy 97.9 1E-05 3.6E-10 77.6 5.2 35 58-93 271-305 (676)
73 3dgh_A TRXR-1, thioredoxin red 97.9 1.2E-05 4E-10 74.0 5.2 34 58-92 8-41 (483)
74 3fbs_A Oxidoreductase; structu 97.9 1.2E-05 4.1E-10 67.6 4.9 34 59-93 2-35 (297)
75 1qo8_A Flavocytochrome C3 fuma 97.9 6.9E-06 2.3E-10 77.3 3.7 36 58-94 120-155 (566)
76 3hdq_A UDP-galactopyranose mut 97.9 1.1E-05 3.8E-10 73.4 5.0 36 58-94 28-63 (397)
77 2ivd_A PPO, PPOX, protoporphyr 97.9 1.1E-05 3.9E-10 73.2 4.9 37 57-94 14-50 (478)
78 3axb_A Putative oxidoreductase 97.8 7.3E-06 2.5E-10 74.1 3.6 34 58-91 22-55 (448)
79 2jae_A L-amino acid oxidase; o 97.8 1.3E-05 4.5E-10 73.2 5.2 37 57-94 9-45 (489)
80 2wdq_A Succinate dehydrogenase 97.8 1.1E-05 3.7E-10 76.7 4.7 36 58-94 6-41 (588)
81 1chu_A Protein (L-aspartate ox 97.8 1.1E-05 3.6E-10 76.0 4.6 35 58-94 7-41 (540)
82 3urh_A Dihydrolipoyl dehydroge 97.8 1.3E-05 4.3E-10 73.9 5.0 36 58-94 24-59 (491)
83 2ywl_A Thioredoxin reductase r 97.8 1.5E-05 5.2E-10 63.1 4.7 34 60-94 2-35 (180)
84 4b1b_A TRXR, thioredoxin reduc 97.8 1.2E-05 4E-10 76.0 4.8 34 59-93 42-75 (542)
85 3ic9_A Dihydrolipoamide dehydr 97.8 1.3E-05 4.4E-10 74.2 4.9 34 59-93 8-41 (492)
86 3ihg_A RDME; flavoenzyme, anth 97.8 1.4E-05 4.8E-10 74.3 5.1 37 58-95 4-40 (535)
87 3f8d_A Thioredoxin reductase ( 97.8 1.4E-05 4.9E-10 67.9 4.7 34 58-92 14-47 (323)
88 3nlc_A Uncharacterized protein 97.8 1E-05 3.4E-10 76.6 4.0 36 58-94 106-141 (549)
89 2vou_A 2,6-dihydroxypyridine h 97.8 1.6E-05 5.4E-10 70.9 5.1 36 58-94 4-39 (397)
90 2qa2_A CABE, polyketide oxygen 97.8 1.5E-05 5E-10 74.1 5.1 38 57-95 10-47 (499)
91 4a9w_A Monooxygenase; baeyer-v 97.8 1.3E-05 4.3E-10 69.0 4.4 35 59-94 3-37 (357)
92 3fmw_A Oxygenase; mithramycin, 97.8 1.4E-05 4.9E-10 75.6 5.0 37 58-95 48-84 (570)
93 3ces_A MNMG, tRNA uridine 5-ca 97.8 1.4E-05 4.7E-10 77.2 4.9 35 58-93 27-61 (651)
94 3ab1_A Ferredoxin--NADP reduct 97.8 1.6E-05 5.4E-10 69.6 4.9 36 58-94 13-48 (360)
95 3g3e_A D-amino-acid oxidase; F 97.8 1E-05 3.5E-10 70.7 3.6 33 61-93 2-39 (351)
96 3dgz_A Thioredoxin reductase 2 97.8 1.3E-05 4.6E-10 73.8 4.5 33 58-91 5-37 (488)
97 3qj4_A Renalase; FAD/NAD(P)-bi 97.8 1.5E-05 5E-10 69.5 4.5 33 60-93 2-37 (342)
98 2zbw_A Thioredoxin reductase; 97.8 1.8E-05 6.1E-10 68.2 5.0 36 58-94 4-39 (335)
99 2h88_A Succinate dehydrogenase 97.8 1.5E-05 5E-10 76.5 4.7 36 58-94 17-52 (621)
100 2yg5_A Putrescine oxidase; oxi 97.8 1.6E-05 5.4E-10 71.7 4.7 36 58-94 4-39 (453)
101 2bs2_A Quinol-fumarate reducta 97.8 1.6E-05 5.5E-10 76.8 4.9 36 58-94 4-39 (660)
102 3lzw_A Ferredoxin--NADP reduct 97.8 1.6E-05 5.5E-10 67.9 4.4 36 58-94 6-41 (332)
103 3nks_A Protoporphyrinogen oxid 97.8 1.7E-05 5.9E-10 71.9 4.8 34 60-94 3-38 (477)
104 3ihm_A Styrene monooxygenase A 97.8 1.4E-05 4.9E-10 72.5 4.3 35 58-93 21-55 (430)
105 3i6d_A Protoporphyrinogen oxid 97.8 1.1E-05 3.6E-10 72.7 3.3 36 59-94 5-45 (470)
106 2vvm_A Monoamine oxidase N; FA 97.8 1.7E-05 5.8E-10 72.6 4.7 35 59-94 39-73 (495)
107 2q7v_A Thioredoxin reductase; 97.8 1.8E-05 6E-10 68.2 4.5 34 58-92 7-40 (325)
108 1ges_A Glutathione reductase; 97.8 1.9E-05 6.5E-10 72.1 4.9 35 58-93 3-37 (450)
109 2zxi_A TRNA uridine 5-carboxym 97.8 1.7E-05 5.9E-10 76.3 4.8 35 58-93 26-60 (637)
110 2b9w_A Putative aminooxidase; 97.8 2.3E-05 7.8E-10 70.1 5.3 37 58-94 5-41 (424)
111 1sez_A Protoporphyrinogen oxid 97.8 2E-05 6.9E-10 72.1 5.0 37 57-94 11-47 (504)
112 3dk9_A Grase, GR, glutathione 97.8 2.1E-05 7.1E-10 72.1 4.9 35 58-93 19-53 (478)
113 1jnr_A Adenylylsulfate reducta 97.7 2E-05 6.7E-10 75.7 4.9 36 58-94 21-60 (643)
114 2r9z_A Glutathione amide reduc 97.7 2.1E-05 7.2E-10 72.1 4.9 35 58-93 3-37 (463)
115 2aqj_A Tryptophan halogenase, 97.7 2.1E-05 7E-10 73.4 4.9 36 58-94 4-42 (538)
116 1rsg_A FMS1 protein; FAD bindi 97.7 1.8E-05 6.1E-10 73.3 4.4 37 58-94 7-43 (516)
117 1v59_A Dihydrolipoamide dehydr 97.7 1.8E-05 6.3E-10 72.4 4.4 35 58-93 4-38 (478)
118 1pj5_A N,N-dimethylglycine oxi 97.7 2E-05 7E-10 77.3 4.9 36 58-94 3-39 (830)
119 3cp8_A TRNA uridine 5-carboxym 97.7 2.1E-05 7.2E-10 75.8 4.8 36 57-93 19-54 (641)
120 3qfa_A Thioredoxin reductase 1 97.7 2.2E-05 7.5E-10 73.2 4.7 34 58-92 31-64 (519)
121 2qae_A Lipoamide, dihydrolipoy 97.7 2.5E-05 8.4E-10 71.4 4.9 35 59-94 2-36 (468)
122 1mo9_A ORF3; nucleotide bindin 97.7 2.9E-05 1E-09 72.3 5.5 37 56-93 40-76 (523)
123 3gyx_A Adenylylsulfate reducta 97.7 1.8E-05 6.1E-10 76.5 4.1 37 58-94 21-62 (662)
124 3d1c_A Flavin-containing putat 97.7 2.5E-05 8.6E-10 68.1 4.7 34 59-93 4-38 (369)
125 2bry_A NEDD9 interacting prote 97.7 3.6E-05 1.2E-09 71.5 5.9 37 57-94 90-126 (497)
126 2hqm_A GR, grase, glutathione 97.7 2.5E-05 8.6E-10 71.8 4.8 35 58-93 10-44 (479)
127 2gjc_A Thiazole biosynthetic e 97.7 2.3E-05 7.9E-10 69.7 4.4 37 58-94 64-101 (326)
128 1zk7_A HGII, reductase, mercur 97.7 2.8E-05 9.7E-10 71.0 5.1 35 58-93 3-37 (467)
129 2yqu_A 2-oxoglutarate dehydrog 97.7 2.6E-05 8.9E-10 71.0 4.8 34 59-93 1-34 (455)
130 1onf_A GR, grase, glutathione 97.7 2.9E-05 9.9E-10 71.9 5.1 34 59-93 2-35 (500)
131 2weu_A Tryptophan 5-halogenase 97.7 1.7E-05 5.7E-10 73.2 3.4 35 59-94 2-39 (511)
132 1ojt_A Surface protein; redox- 97.7 2.3E-05 8E-10 72.0 4.4 35 58-93 5-39 (482)
133 2q0l_A TRXR, thioredoxin reduc 97.7 2.7E-05 9.3E-10 66.4 4.4 32 60-92 2-34 (311)
134 2dkh_A 3-hydroxybenzoate hydro 97.7 3E-05 1E-09 74.2 5.1 37 57-94 30-67 (639)
135 2r0c_A REBC; flavin adenine di 97.7 2.7E-05 9.1E-10 73.1 4.7 37 58-95 25-61 (549)
136 1fl2_A Alkyl hydroperoxide red 97.7 3E-05 1E-09 66.1 4.5 32 59-91 1-32 (310)
137 1vg0_A RAB proteins geranylger 97.7 3.8E-05 1.3E-09 74.1 5.4 40 56-96 5-44 (650)
138 2e5v_A L-aspartate oxidase; ar 97.6 3.3E-05 1.1E-09 71.3 4.6 31 61-92 1-31 (472)
139 1zmd_A Dihydrolipoyl dehydroge 97.6 3.2E-05 1.1E-09 70.8 4.5 35 58-93 5-39 (474)
140 1ebd_A E3BD, dihydrolipoamide 97.6 3.4E-05 1.2E-09 70.3 4.6 33 59-92 3-35 (455)
141 2e4g_A Tryptophan halogenase; 97.6 4.2E-05 1.4E-09 71.7 5.4 36 58-94 24-62 (550)
142 1trb_A Thioredoxin reductase; 97.6 2.7E-05 9.1E-10 66.6 3.7 34 58-92 4-37 (320)
143 1w4x_A Phenylacetone monooxyge 97.6 3.6E-05 1.2E-09 72.0 4.9 36 58-94 15-50 (542)
144 1dxl_A Dihydrolipoamide dehydr 97.6 3.3E-05 1.1E-09 70.5 4.5 35 58-93 5-39 (470)
145 2bi7_A UDP-galactopyranose mut 97.6 4.7E-05 1.6E-09 68.3 5.3 35 59-94 3-37 (384)
146 4dsg_A UDP-galactopyranose mut 97.6 4.8E-05 1.6E-09 70.3 5.4 37 58-94 8-44 (484)
147 3c4a_A Probable tryptophan hyd 97.6 3.4E-05 1.2E-09 68.5 4.2 35 61-95 2-37 (381)
148 3r9u_A Thioredoxin reductase; 97.6 2.7E-05 9.4E-10 66.0 3.3 34 58-92 3-37 (315)
149 2a8x_A Dihydrolipoyl dehydroge 97.6 3.8E-05 1.3E-09 70.1 4.4 33 59-92 3-35 (464)
150 2a87_A TRXR, TR, thioredoxin r 97.6 3E-05 1E-09 67.2 3.6 35 57-92 12-46 (335)
151 2pyx_A Tryptophan halogenase; 97.6 3.8E-05 1.3E-09 71.4 4.4 36 58-94 6-53 (526)
152 1xdi_A RV3303C-LPDA; reductase 97.6 3.3E-05 1.1E-09 71.3 4.0 34 59-93 2-38 (499)
153 1vdc_A NTR, NADPH dependent th 97.6 3.4E-05 1.2E-09 66.4 3.7 33 58-91 7-39 (333)
154 2gv8_A Monooxygenase; FMO, FAD 97.6 5.9E-05 2E-09 68.5 5.3 36 58-94 5-42 (447)
155 1fec_A Trypanothione reductase 97.6 4.2E-05 1.4E-09 70.7 4.4 32 58-90 2-34 (490)
156 2e1m_A L-glutamate oxidase; L- 97.6 5.5E-05 1.9E-09 68.4 5.0 34 58-92 43-76 (376)
157 2eq6_A Pyruvate dehydrogenase 97.6 5.5E-05 1.9E-09 69.3 4.7 34 59-93 6-39 (464)
158 4hb9_A Similarities with proba 97.6 6.8E-05 2.3E-09 65.8 5.1 33 61-94 3-35 (412)
159 1kf6_A Fumarate reductase flav 97.6 4.7E-05 1.6E-09 72.5 4.4 37 58-94 4-41 (602)
160 3lov_A Protoporphyrinogen oxid 97.6 5.1E-05 1.8E-09 68.9 4.4 36 59-94 4-40 (475)
161 2wpf_A Trypanothione reductase 97.5 4.1E-05 1.4E-09 70.9 3.8 32 58-90 6-38 (495)
162 1lvl_A Dihydrolipoamide dehydr 97.5 4.7E-05 1.6E-09 69.6 3.9 35 58-93 4-38 (458)
163 2iid_A L-amino-acid oxidase; f 97.5 5.9E-05 2E-09 69.0 4.4 36 58-94 32-67 (498)
164 1b37_A Protein (polyamine oxid 97.5 7E-05 2.4E-09 68.3 4.8 36 58-94 3-39 (472)
165 3s5w_A L-ornithine 5-monooxyge 97.5 5.5E-05 1.9E-09 68.6 3.5 37 58-94 29-69 (463)
166 1pn0_A Phenol 2-monooxygenase; 97.5 7.7E-05 2.6E-09 71.8 4.6 36 58-94 7-47 (665)
167 2x8g_A Thioredoxin glutathione 97.5 8.6E-05 3E-09 70.0 4.7 35 57-92 105-139 (598)
168 4ap3_A Steroid monooxygenase; 97.4 9.2E-05 3.2E-09 69.7 4.8 35 58-93 20-54 (549)
169 3uox_A Otemo; baeyer-villiger 97.4 9.9E-05 3.4E-09 69.4 4.9 35 58-93 8-42 (545)
170 3g5s_A Methylenetetrahydrofola 97.4 0.0001 3.6E-09 67.7 4.8 33 60-93 2-34 (443)
171 3gwf_A Cyclohexanone monooxyge 97.4 0.00011 3.8E-09 69.0 4.9 35 58-93 7-42 (540)
172 1d4d_A Flavocytochrome C fumar 97.4 0.0001 3.6E-09 69.5 4.8 36 58-94 125-160 (572)
173 2v3a_A Rubredoxin reductase; a 97.4 0.00014 4.8E-09 64.6 5.1 36 58-93 3-39 (384)
174 2cdu_A NADPH oxidase; flavoenz 97.4 0.0001 3.6E-09 66.9 4.1 35 60-94 1-36 (452)
175 1q1r_A Putidaredoxin reductase 97.4 0.00016 5.5E-09 65.6 5.0 37 58-94 3-40 (431)
176 3lxd_A FAD-dependent pyridine 97.3 0.00018 6.2E-09 64.5 5.3 38 58-95 8-46 (415)
177 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00015 5.2E-09 67.5 4.6 34 57-91 210-243 (521)
178 3k30_A Histamine dehydrogenase 97.3 0.00014 4.7E-09 70.1 4.4 37 57-94 389-425 (690)
179 4gut_A Lysine-specific histone 97.3 0.00027 9.2E-09 69.4 6.4 37 57-94 334-370 (776)
180 1xhc_A NADH oxidase /nitrite r 97.3 0.00021 7E-09 63.6 4.6 34 59-94 8-41 (367)
181 2vdc_G Glutamate synthase [NAD 97.3 0.00019 6.7E-09 66.0 4.5 36 58-94 121-156 (456)
182 2xve_A Flavin-containing monoo 97.2 0.00022 7.4E-09 65.5 4.7 34 60-94 3-42 (464)
183 1y56_A Hypothetical protein PH 97.2 0.00015 5.3E-09 67.0 3.6 36 58-95 107-142 (493)
184 1m6i_A Programmed cell death p 97.2 0.00023 8E-09 65.7 4.5 39 57-95 9-48 (493)
185 1nhp_A NADH peroxidase; oxidor 97.2 0.00023 7.9E-09 64.5 4.3 35 60-94 1-36 (447)
186 2bc0_A NADH oxidase; flavoprot 97.2 0.00017 5.7E-09 66.5 3.2 36 59-94 35-72 (490)
187 3oc4_A Oxidoreductase, pyridin 97.2 0.00023 7.9E-09 64.7 4.0 36 60-95 3-39 (452)
188 3kd9_A Coenzyme A disulfide re 97.2 0.00027 9.2E-09 64.1 4.3 37 59-95 3-40 (449)
189 3cgb_A Pyridine nucleotide-dis 97.1 0.00028 9.6E-09 64.8 4.1 37 59-95 36-73 (480)
190 1ps9_A 2,4-dienoyl-COA reducta 97.1 0.00041 1.4E-08 66.5 5.4 36 58-94 372-407 (671)
191 3iwa_A FAD-dependent pyridine 97.1 0.00028 9.5E-09 64.5 3.7 37 59-95 3-40 (472)
192 3h8l_A NADH oxidase; membrane 97.1 0.00035 1.2E-08 62.4 4.3 34 60-94 2-38 (409)
193 2z3y_A Lysine-specific histone 97.1 0.00043 1.5E-08 66.5 5.1 37 57-94 105-141 (662)
194 3h28_A Sulfide-quinone reducta 97.1 0.00044 1.5E-08 62.4 4.8 35 60-95 3-39 (430)
195 2gqw_A Ferredoxin reductase; f 97.1 0.00042 1.4E-08 62.3 4.6 38 58-95 6-44 (408)
196 1o94_A Tmadh, trimethylamine d 97.1 0.00047 1.6E-08 66.9 5.2 36 58-94 388-423 (729)
197 2gag_A Heterotetrameric sarcos 97.0 0.00042 1.4E-08 69.4 4.7 36 58-94 127-162 (965)
198 3fg2_P Putative rubredoxin red 97.0 0.00069 2.4E-08 60.6 5.1 36 60-95 2-38 (404)
199 3ics_A Coenzyme A-disulfide re 97.0 0.0005 1.7E-08 64.5 4.4 38 58-95 35-73 (588)
200 1lqt_A FPRA; NADP+ derivative, 96.9 0.00056 1.9E-08 62.8 4.2 35 59-94 3-44 (456)
201 3sx6_A Sulfide-quinone reducta 96.9 0.00064 2.2E-08 61.5 4.1 36 59-95 4-42 (437)
202 2xag_A Lysine-specific histone 96.8 0.001 3.5E-08 66.0 5.2 36 58-94 277-312 (852)
203 3ntd_A FAD-dependent pyridine 96.7 0.00097 3.3E-08 62.0 4.1 36 60-95 2-38 (565)
204 1gte_A Dihydropyrimidine dehyd 96.7 0.0011 3.9E-08 66.7 4.9 35 58-93 186-221 (1025)
205 1cjc_A Protein (adrenodoxin re 96.7 0.0011 3.8E-08 60.9 4.3 37 58-94 5-42 (460)
206 3ef6_A Toluene 1,2-dioxygenase 96.7 0.0015 5.2E-08 58.6 5.1 36 60-95 3-39 (410)
207 3vrd_B FCCB subunit, flavocyto 96.6 0.0021 7.1E-08 56.9 5.1 33 62-94 5-38 (401)
208 4eqs_A Coenzyme A disulfide re 96.4 0.0023 8E-08 58.1 4.2 34 62-95 3-37 (437)
209 4b63_A L-ornithine N5 monooxyg 96.1 0.005 1.7E-07 57.0 5.2 37 58-94 38-87 (501)
210 3klj_A NAD(FAD)-dependent dehy 96.1 0.0065 2.2E-07 54.3 5.5 37 58-95 8-44 (385)
211 3hyw_A Sulfide-quinone reducta 96.0 0.0059 2E-07 55.1 5.0 34 61-94 4-38 (430)
212 3ayj_A Pro-enzyme of L-phenyla 96.0 0.0033 1.1E-07 61.3 3.4 36 58-93 55-97 (721)
213 4g6h_A Rotenone-insensitive NA 95.8 0.0065 2.2E-07 56.4 4.4 36 58-94 41-76 (502)
214 1nhp_A NADH peroxidase; oxidor 94.4 0.04 1.4E-06 49.6 5.0 36 58-94 148-183 (447)
215 3fwz_A Inner membrane protein 94.2 0.052 1.8E-06 41.1 4.5 34 60-94 8-41 (140)
216 3llv_A Exopolyphosphatase-rela 94.1 0.054 1.9E-06 40.7 4.5 32 61-93 8-39 (141)
217 1lss_A TRK system potassium up 93.9 0.071 2.4E-06 39.3 4.7 32 61-93 6-37 (140)
218 4gcm_A TRXR, thioredoxin reduc 93.7 0.073 2.5E-06 45.0 5.0 34 61-95 147-180 (312)
219 1id1_A Putative potassium chan 93.6 0.078 2.7E-06 40.6 4.5 31 61-92 5-35 (153)
220 2g1u_A Hypothetical protein TM 93.5 0.083 2.8E-06 40.6 4.7 35 59-94 19-53 (155)
221 1ebd_A E3BD, dihydrolipoamide 93.0 0.098 3.4E-06 47.2 5.0 35 60-95 171-205 (455)
222 3klj_A NAD(FAD)-dependent dehy 93.0 0.076 2.6E-06 47.3 4.2 35 60-95 147-181 (385)
223 2yqu_A 2-oxoglutarate dehydrog 93.0 0.098 3.4E-06 47.2 4.9 35 60-95 168-202 (455)
224 2eq6_A Pyruvate dehydrogenase 92.9 0.097 3.3E-06 47.5 4.8 35 60-95 170-204 (464)
225 1lvl_A Dihydrolipoamide dehydr 92.8 0.082 2.8E-06 47.9 4.1 35 60-95 172-206 (458)
226 2v3a_A Rubredoxin reductase; a 92.7 0.12 4E-06 45.5 5.0 36 59-95 145-180 (384)
227 1xhc_A NADH oxidase /nitrite r 92.6 0.1 3.4E-06 46.0 4.3 35 60-95 144-178 (367)
228 4a5l_A Thioredoxin reductase; 92.5 0.14 4.7E-06 43.0 5.0 35 60-95 153-187 (314)
229 3ic5_A Putative saccharopine d 92.5 0.15 5E-06 36.4 4.5 34 60-93 6-39 (118)
230 1v59_A Dihydrolipoamide dehydr 92.1 0.14 4.9E-06 46.3 4.9 35 60-95 184-218 (478)
231 1ges_A Glutathione reductase; 92.0 0.16 5.4E-06 45.9 4.9 34 60-94 168-201 (450)
232 2hmt_A YUAA protein; RCK, KTN, 91.9 0.15 5.1E-06 37.6 4.0 32 61-93 8-39 (144)
233 3d1c_A Flavin-containing putat 91.7 0.16 5.5E-06 43.6 4.5 33 61-94 168-200 (369)
234 2gqw_A Ferredoxin reductase; f 91.6 0.2 6.7E-06 44.6 5.1 36 59-95 145-180 (408)
235 3cgb_A Pyridine nucleotide-dis 91.4 0.13 4.3E-06 47.0 3.6 35 59-94 186-220 (480)
236 3c85_A Putative glutathione-re 91.3 0.17 5.8E-06 39.7 3.9 33 60-93 40-73 (183)
237 2bc0_A NADH oxidase; flavoprot 91.3 0.21 7.3E-06 45.5 5.1 35 60-95 195-229 (490)
238 3l4b_C TRKA K+ channel protien 91.1 0.18 6.1E-06 40.9 3.9 31 62-93 3-33 (218)
239 2q0l_A TRXR, thioredoxin reduc 90.9 0.27 9.2E-06 41.2 5.0 35 60-95 144-178 (311)
240 2r9z_A Glutathione amide reduc 90.8 0.25 8.4E-06 44.8 4.9 33 61-94 168-200 (463)
241 1fl2_A Alkyl hydroperoxide red 90.7 0.27 9.2E-06 41.2 4.8 35 60-95 145-179 (310)
242 1zmd_A Dihydrolipoyl dehydroge 90.7 0.25 8.6E-06 44.7 4.9 34 61-95 180-213 (474)
243 2gv8_A Monooxygenase; FMO, FAD 90.7 0.25 8.6E-06 44.3 4.9 34 60-94 213-247 (447)
244 2a8x_A Dihydrolipoyl dehydroge 90.5 0.27 9.1E-06 44.4 4.9 35 60-95 172-206 (464)
245 3kd9_A Coenzyme A disulfide re 90.3 0.29 1E-05 43.9 5.0 34 61-95 150-183 (449)
246 1onf_A GR, grase, glutathione 90.3 0.29 1E-05 44.8 5.0 34 60-94 177-210 (500)
247 1vdc_A NTR, NADPH dependent th 90.1 0.34 1.2E-05 41.0 4.9 35 60-95 160-194 (333)
248 2hqm_A GR, grase, glutathione 90.0 0.31 1.1E-05 44.3 4.9 34 60-94 186-219 (479)
249 2cdu_A NADPH oxidase; flavoenz 90.0 0.35 1.2E-05 43.5 5.2 35 60-95 150-184 (452)
250 2zbw_A Thioredoxin reductase; 90.0 0.31 1.1E-05 41.2 4.7 35 60-95 153-187 (335)
251 1q1r_A Putidaredoxin reductase 89.9 0.33 1.1E-05 43.6 4.9 35 60-95 150-184 (431)
252 2a87_A TRXR, TR, thioredoxin r 89.9 0.37 1.2E-05 41.1 5.0 35 60-95 156-190 (335)
253 3i83_A 2-dehydropantoate 2-red 89.9 0.32 1.1E-05 41.9 4.7 32 61-93 4-35 (320)
254 3ic9_A Dihydrolipoamide dehydr 89.8 0.32 1.1E-05 44.5 4.8 35 60-95 175-209 (492)
255 3uox_A Otemo; baeyer-villiger 89.8 0.32 1.1E-05 45.4 4.9 34 60-94 186-219 (545)
256 1ojt_A Surface protein; redox- 89.7 0.26 9E-06 44.8 4.2 35 60-95 186-220 (482)
257 3ef6_A Toluene 1,2-dioxygenase 89.6 0.36 1.2E-05 42.9 4.9 36 59-95 143-178 (410)
258 3gwf_A Cyclohexanone monooxyge 89.5 0.38 1.3E-05 44.9 5.2 34 60-94 179-212 (540)
259 2xve_A Flavin-containing monoo 89.5 0.31 1.1E-05 44.3 4.5 34 60-94 198-231 (464)
260 1trb_A Thioredoxin reductase; 89.4 0.42 1.4E-05 40.1 5.0 35 60-95 146-180 (320)
261 1dxl_A Dihydrolipoamide dehydr 89.3 0.23 7.7E-06 44.8 3.4 35 60-95 178-212 (470)
262 3hn2_A 2-dehydropantoate 2-red 89.3 0.32 1.1E-05 41.8 4.2 32 61-93 4-35 (312)
263 1zk7_A HGII, reductase, mercur 89.2 0.39 1.3E-05 43.3 4.9 35 60-95 177-211 (467)
264 2q7v_A Thioredoxin reductase; 89.2 0.44 1.5E-05 40.2 5.0 35 60-95 153-187 (325)
265 3itj_A Thioredoxin reductase 1 89.1 0.45 1.5E-05 40.0 5.0 35 60-95 174-208 (338)
266 4eqs_A Coenzyme A disulfide re 89.1 0.33 1.1E-05 43.7 4.3 34 61-95 149-182 (437)
267 2qae_A Lipoamide, dihydrolipoy 89.1 0.41 1.4E-05 43.2 4.9 35 60-95 175-209 (468)
268 1ks9_A KPA reductase;, 2-dehyd 89.0 0.46 1.6E-05 39.5 4.9 32 62-94 3-34 (291)
269 3ab1_A Ferredoxin--NADP reduct 88.4 0.46 1.6E-05 40.8 4.7 34 61-95 165-198 (360)
270 4g65_A TRK system potassium up 88.4 0.34 1.2E-05 44.4 3.9 32 62-94 6-37 (461)
271 3l8k_A Dihydrolipoyl dehydroge 88.3 0.49 1.7E-05 42.8 4.9 35 60-95 173-207 (466)
272 3cty_A Thioredoxin reductase; 88.2 0.52 1.8E-05 39.7 4.7 35 60-95 156-190 (319)
273 4g6h_A Rotenone-insensitive NA 88.2 0.25 8.6E-06 45.6 2.9 36 60-95 218-266 (502)
274 3ntd_A FAD-dependent pyridine 88.1 0.52 1.8E-05 43.4 5.1 34 61-95 153-186 (565)
275 3ado_A Lambda-crystallin; L-gu 88.0 0.46 1.6E-05 41.7 4.4 32 61-93 8-39 (319)
276 3urh_A Dihydrolipoyl dehydroge 88.0 0.41 1.4E-05 43.5 4.2 34 61-95 200-233 (491)
277 3lxd_A FAD-dependent pyridine 88.0 0.57 1.9E-05 41.5 5.1 36 59-95 152-187 (415)
278 3dk9_A Grase, GR, glutathione 88.0 0.53 1.8E-05 42.6 4.9 34 60-94 188-221 (478)
279 4ap3_A Steroid monooxygenase; 88.0 0.38 1.3E-05 44.9 4.1 34 60-94 192-225 (549)
280 3ghy_A Ketopantoate reductase 87.8 0.48 1.6E-05 41.1 4.3 31 61-92 5-35 (335)
281 3fg2_P Putative rubredoxin red 87.7 0.58 2E-05 41.3 4.9 35 60-95 143-177 (404)
282 3s5w_A L-ornithine 5-monooxyge 87.6 0.39 1.3E-05 43.0 3.7 37 59-95 227-264 (463)
283 3g17_A Similar to 2-dehydropan 87.5 0.37 1.3E-05 41.0 3.4 32 61-93 4-35 (294)
284 2ew2_A 2-dehydropantoate 2-red 87.4 0.58 2E-05 39.3 4.5 31 61-92 5-35 (316)
285 2raf_A Putative dinucleotide-b 87.4 0.71 2.4E-05 37.3 4.9 33 60-93 20-52 (209)
286 1f0y_A HCDH, L-3-hydroxyacyl-C 87.4 0.58 2E-05 39.8 4.5 32 61-93 17-48 (302)
287 3l9w_A Glutathione-regulated p 87.3 0.54 1.9E-05 42.5 4.5 34 60-94 5-38 (413)
288 2x8g_A Thioredoxin glutathione 87.2 0.56 1.9E-05 43.8 4.7 31 61-92 288-318 (598)
289 3lad_A Dihydrolipoamide dehydr 87.1 0.66 2.3E-05 41.8 5.1 35 60-95 181-215 (476)
290 4e12_A Diketoreductase; oxidor 86.9 0.63 2.2E-05 39.4 4.5 32 61-93 6-37 (283)
291 2wpf_A Trypanothione reductase 86.8 0.55 1.9E-05 42.9 4.4 34 61-95 193-229 (495)
292 3oc4_A Oxidoreductase, pyridin 86.8 0.72 2.5E-05 41.4 5.1 35 60-95 148-182 (452)
293 1lld_A L-lactate dehydrogenase 86.6 0.66 2.3E-05 39.6 4.5 32 61-93 9-42 (319)
294 3ego_A Probable 2-dehydropanto 86.6 0.72 2.4E-05 39.6 4.8 31 61-93 4-34 (307)
295 3hwr_A 2-dehydropantoate 2-red 86.6 0.65 2.2E-05 40.0 4.5 31 60-92 20-50 (318)
296 1fec_A Trypanothione reductase 86.4 0.6 2.1E-05 42.6 4.4 34 60-94 188-224 (490)
297 3f8d_A Thioredoxin reductase ( 85.9 0.67 2.3E-05 38.5 4.1 36 59-95 154-189 (323)
298 3fbs_A Oxidoreductase; structu 85.9 0.78 2.7E-05 37.7 4.4 33 60-94 142-174 (297)
299 1mo9_A ORF3; nucleotide bindin 85.8 0.81 2.8E-05 42.1 4.9 35 60-95 215-249 (523)
300 3ics_A Coenzyme A-disulfide re 85.7 0.8 2.7E-05 42.6 4.9 35 60-95 188-222 (588)
301 3lzw_A Ferredoxin--NADP reduct 85.3 0.95 3.2E-05 37.8 4.8 35 60-95 155-189 (332)
302 1xdi_A RV3303C-LPDA; reductase 85.2 0.84 2.9E-05 41.6 4.7 35 60-95 183-217 (499)
303 3dgz_A Thioredoxin reductase 2 85.2 0.87 3E-05 41.3 4.8 32 61-93 187-218 (488)
304 1jay_A Coenzyme F420H2:NADP+ o 85.0 1.1 3.6E-05 35.7 4.8 31 62-93 3-34 (212)
305 1bg6_A N-(1-D-carboxylethyl)-L 85.0 0.89 3E-05 39.1 4.5 31 61-92 6-36 (359)
306 1hyu_A AHPF, alkyl hydroperoxi 85.0 0.66 2.3E-05 42.8 3.9 35 60-95 356-390 (521)
307 3r9u_A Thioredoxin reductase; 84.9 1.1 3.7E-05 37.2 4.9 35 60-95 148-182 (315)
308 4a9w_A Monooxygenase; baeyer-v 84.8 0.97 3.3E-05 38.0 4.6 32 60-93 164-195 (357)
309 3o0h_A Glutathione reductase; 84.6 0.98 3.3E-05 40.9 4.8 34 60-94 192-225 (484)
310 3iwa_A FAD-dependent pyridine 84.4 0.81 2.8E-05 41.3 4.2 35 60-95 160-195 (472)
311 1cjc_A Protein (adrenodoxin re 84.3 1.1 3.8E-05 40.7 5.1 35 60-94 146-200 (460)
312 2aef_A Calcium-gated potassium 84.3 0.61 2.1E-05 38.0 3.0 33 60-94 10-42 (234)
313 3qfa_A Thioredoxin reductase 1 84.0 1 3.4E-05 41.5 4.7 32 61-93 212-243 (519)
314 1jw9_B Molybdopterin biosynthe 84.0 0.9 3.1E-05 38.0 4.0 35 59-93 31-65 (249)
315 1txg_A Glycerol-3-phosphate de 83.7 0.83 2.8E-05 38.9 3.8 29 62-91 3-31 (335)
316 1z82_A Glycerol-3-phosphate de 83.4 1.1 3.9E-05 38.6 4.5 34 58-92 13-46 (335)
317 4dna_A Probable glutathione re 83.0 1.3 4.4E-05 39.9 4.9 34 60-94 171-204 (463)
318 2vdc_G Glutamate synthase [NAD 82.9 1.4 4.7E-05 40.1 5.1 36 60-95 265-300 (456)
319 3dgh_A TRXR-1, thioredoxin red 82.8 1.3 4.6E-05 40.0 5.0 32 61-93 189-220 (483)
320 3gpi_A NAD-dependent epimerase 82.7 1.6 5.4E-05 36.1 5.0 33 61-94 5-37 (286)
321 3oj0_A Glutr, glutamyl-tRNA re 82.4 0.79 2.7E-05 34.4 2.8 33 60-93 22-54 (144)
322 2y0c_A BCEC, UDP-glucose dehyd 82.4 1.2 4.1E-05 40.9 4.5 34 59-93 8-41 (478)
323 2vns_A Metalloreductase steap3 82.1 1.5 5.1E-05 35.5 4.5 33 60-93 29-61 (215)
324 1zcj_A Peroxisomal bifunctiona 82.1 1.3 4.5E-05 40.4 4.7 32 61-93 39-70 (463)
325 1kyq_A Met8P, siroheme biosynt 82.0 1 3.5E-05 38.6 3.6 33 59-92 13-45 (274)
326 3k96_A Glycerol-3-phosphate de 81.9 1.4 4.6E-05 39.0 4.5 33 60-93 30-62 (356)
327 2dpo_A L-gulonate 3-dehydrogen 81.5 1.4 4.8E-05 38.3 4.4 32 61-93 8-39 (319)
328 2v6b_A L-LDH, L-lactate dehydr 81.5 1.5 5.1E-05 37.7 4.5 31 62-93 3-35 (304)
329 1pzg_A LDH, lactate dehydrogen 81.3 1.2 4.2E-05 38.8 4.0 34 60-93 10-43 (331)
330 3dfz_A SIRC, precorrin-2 dehyd 81.3 1.5 5E-05 36.5 4.3 33 58-91 30-62 (223)
331 4b1b_A TRXR, thioredoxin reduc 81.3 1.2 4.1E-05 41.6 4.1 33 60-93 224-256 (542)
332 3rui_A Ubiquitin-like modifier 81.2 1.7 5.7E-05 38.5 4.8 37 58-94 33-69 (340)
333 2ewd_A Lactate dehydrogenase,; 81.1 1.4 4.8E-05 37.9 4.2 33 61-93 6-38 (317)
334 1evy_A Glycerol-3-phosphate de 80.9 1.2 4.1E-05 38.8 3.8 32 61-93 17-48 (366)
335 1lqt_A FPRA; NADP+ derivative, 80.9 1.8 6.3E-05 39.2 5.1 35 60-94 148-202 (456)
336 3ius_A Uncharacterized conserv 80.8 1.7 5.9E-05 35.8 4.6 32 61-93 7-38 (286)
337 3c7a_A Octopine dehydrogenase; 80.7 1.4 4.9E-05 38.9 4.3 29 61-90 4-33 (404)
338 3dtt_A NADP oxidoreductase; st 80.5 1.9 6.4E-05 35.6 4.7 35 59-94 19-53 (245)
339 3ew7_A LMO0794 protein; Q8Y8U8 80.5 2.2 7.4E-05 33.5 4.9 31 62-93 3-34 (221)
340 2hjr_A Malate dehydrogenase; m 80.2 1.8 6.2E-05 37.7 4.7 34 60-93 15-48 (328)
341 4gx0_A TRKA domain protein; me 80.2 1.8 6.2E-05 40.1 4.9 35 60-95 349-383 (565)
342 3h2s_A Putative NADH-flavin re 80.2 2 7E-05 33.8 4.7 31 62-93 3-34 (224)
343 1mv8_A GMD, GDP-mannose 6-dehy 80.2 1.4 4.9E-05 39.6 4.2 31 62-93 3-33 (436)
344 3gg2_A Sugar dehydrogenase, UD 79.7 1.7 5.9E-05 39.6 4.5 32 61-93 4-35 (450)
345 3k6j_A Protein F01G10.3, confi 79.5 1.8 6E-05 39.9 4.5 33 61-94 56-88 (460)
346 1vl6_A Malate oxidoreductase; 79.4 1.6 5.5E-05 39.4 4.1 35 58-92 191-225 (388)
347 1guz_A Malate dehydrogenase; o 79.2 2.4 8.2E-05 36.4 5.1 33 62-94 3-36 (310)
348 1hdo_A Biliverdin IX beta redu 79.1 2.3 7.9E-05 32.8 4.6 32 62-94 6-38 (206)
349 2f1k_A Prephenate dehydrogenas 79.1 2.1 7.1E-05 35.6 4.5 31 62-93 3-33 (279)
350 1zud_1 Adenylyltransferase THI 78.8 2.1 7.1E-05 35.8 4.4 36 58-93 27-62 (251)
351 3g0o_A 3-hydroxyisobutyrate de 78.4 2.2 7.4E-05 36.2 4.5 33 60-93 8-40 (303)
352 1a5z_A L-lactate dehydrogenase 78.3 1.7 5.8E-05 37.6 3.8 31 62-93 3-35 (319)
353 2pv7_A T-protein [includes: ch 78.3 2.4 8.1E-05 36.0 4.7 33 61-94 23-56 (298)
354 3pef_A 6-phosphogluconate dehy 78.2 2.3 7.7E-05 35.7 4.5 32 62-94 4-35 (287)
355 1t2d_A LDH-P, L-lactate dehydr 78.1 2.3 7.9E-05 36.9 4.7 33 61-93 6-38 (322)
356 3doj_A AT3G25530, dehydrogenas 78.1 2.2 7.7E-05 36.4 4.5 34 60-94 22-55 (310)
357 2uyy_A N-PAC protein; long-cha 78.1 2.1 7.3E-05 36.3 4.4 33 60-93 31-63 (316)
358 1nyt_A Shikimate 5-dehydrogena 78.0 2.3 7.9E-05 35.7 4.5 32 61-93 121-152 (271)
359 1o94_A Tmadh, trimethylamine d 77.8 1.8 6.2E-05 41.6 4.3 32 61-93 530-563 (729)
360 1zej_A HBD-9, 3-hydroxyacyl-CO 77.8 2.4 8.2E-05 36.5 4.6 33 59-93 12-44 (293)
361 1ur5_A Malate dehydrogenase; o 77.6 2.5 8.5E-05 36.4 4.7 33 61-93 4-36 (309)
362 1m6i_A Programmed cell death p 77.3 1.9 6.5E-05 39.3 4.1 34 60-93 181-217 (493)
363 2qyt_A 2-dehydropantoate 2-red 77.0 1.8 6.2E-05 36.4 3.6 31 61-91 10-45 (317)
364 3e8x_A Putative NAD-dependent 77.0 2.8 9.7E-05 33.5 4.7 33 61-94 23-56 (236)
365 2h78_A Hibadh, 3-hydroxyisobut 77.0 2.2 7.6E-05 35.9 4.2 32 61-93 5-36 (302)
366 3dqp_A Oxidoreductase YLBE; al 76.6 3 0.0001 33.0 4.6 32 62-94 3-35 (219)
367 1vpd_A Tartronate semialdehyde 76.5 2.3 8E-05 35.6 4.2 32 61-93 7-38 (299)
368 2g5c_A Prephenate dehydrogenas 76.4 2.7 9.2E-05 34.9 4.5 31 62-93 4-36 (281)
369 4huj_A Uncharacterized protein 76.3 1.5 5.1E-05 35.6 2.8 33 60-93 24-57 (220)
370 3mog_A Probable 3-hydroxybutyr 76.3 2.4 8E-05 39.1 4.4 32 61-93 7-38 (483)
371 3o38_A Short chain dehydrogena 76.3 2 6.9E-05 35.2 3.6 32 61-93 24-57 (266)
372 3c24_A Putative oxidoreductase 76.2 2.7 9.3E-05 35.2 4.5 32 61-93 13-45 (286)
373 3qha_A Putative oxidoreductase 76.0 2.6 9E-05 35.7 4.4 34 60-94 16-49 (296)
374 1w4x_A Phenylacetone monooxyge 76.0 2.3 7.8E-05 39.2 4.3 34 61-95 188-221 (542)
375 3vh1_A Ubiquitin-like modifier 75.8 2.9 0.0001 39.8 4.9 35 59-93 327-361 (598)
376 1gte_A Dihydropyrimidine dehyd 75.6 2.8 9.5E-05 42.1 5.0 34 61-94 334-367 (1025)
377 3vps_A TUNA, NAD-dependent epi 75.5 3.2 0.00011 34.4 4.7 33 61-94 9-42 (321)
378 2a9f_A Putative malic enzyme ( 75.5 2.4 8.2E-05 38.4 4.1 36 58-93 187-222 (398)
379 2dkn_A 3-alpha-hydroxysteroid 75.2 4.1 0.00014 32.6 5.2 32 62-94 4-36 (255)
380 1dlj_A UDP-glucose dehydrogena 75.1 2.8 9.6E-05 37.4 4.5 30 62-93 3-32 (402)
381 2cvz_A Dehydrogenase, 3-hydrox 75.1 2.8 9.7E-05 34.7 4.3 30 62-93 4-33 (289)
382 2gf2_A Hibadh, 3-hydroxyisobut 75.0 2.8 9.7E-05 35.0 4.3 31 62-93 3-33 (296)
383 4dll_A 2-hydroxy-3-oxopropiona 74.9 2.6 9E-05 36.1 4.1 33 60-93 32-64 (320)
384 4gsl_A Ubiquitin-like modifier 74.9 3 0.0001 39.8 4.8 36 59-94 326-361 (615)
385 4gx0_A TRKA domain protein; me 74.8 10 0.00034 35.0 8.3 34 59-93 127-160 (565)
386 3g79_A NDP-N-acetyl-D-galactos 74.7 2.8 9.7E-05 38.6 4.5 34 60-94 19-54 (478)
387 1i36_A Conserved hypothetical 74.4 3 0.0001 34.3 4.2 29 62-91 3-31 (264)
388 3h8v_A Ubiquitin-like modifier 74.3 2.6 8.9E-05 36.4 3.9 36 58-93 35-70 (292)
389 3h5n_A MCCB protein; ubiquitin 74.2 2.9 9.8E-05 36.9 4.3 35 59-93 118-152 (353)
390 3cky_A 2-hydroxymethyl glutara 73.9 3 0.0001 34.9 4.1 32 61-93 6-37 (301)
391 1lu9_A Methylene tetrahydromet 73.8 3.6 0.00012 34.6 4.7 32 60-92 120-152 (287)
392 3qvo_A NMRA family protein; st 73.8 3.6 0.00012 33.1 4.5 34 61-94 25-59 (236)
393 3tl2_A Malate dehydrogenase; c 73.6 3.4 0.00012 35.9 4.5 31 61-92 10-41 (315)
394 2eez_A Alanine dehydrogenase; 73.6 3.5 0.00012 36.2 4.7 33 60-93 167-199 (369)
395 1nvt_A Shikimate 5'-dehydrogen 73.5 3.4 0.00012 34.9 4.4 30 61-92 130-159 (287)
396 3r6d_A NAD-dependent epimerase 73.5 4.1 0.00014 32.2 4.7 32 62-94 8-41 (221)
397 3pdu_A 3-hydroxyisobutyrate de 73.4 2.3 7.9E-05 35.6 3.3 32 62-94 4-35 (287)
398 2egg_A AROE, shikimate 5-dehyd 73.1 4 0.00014 34.9 4.8 33 61-93 143-175 (297)
399 1p77_A Shikimate 5-dehydrogena 72.9 2.7 9.3E-05 35.3 3.6 33 60-93 120-152 (272)
400 3ggo_A Prephenate dehydrogenas 72.8 3.6 0.00012 35.4 4.5 32 61-93 35-68 (314)
401 2axq_A Saccharopine dehydrogen 72.8 3.1 0.0001 38.2 4.2 32 61-92 25-56 (467)
402 3phh_A Shikimate dehydrogenase 72.8 3.8 0.00013 34.9 4.5 34 60-94 119-152 (269)
403 3dhn_A NAD-dependent epimerase 72.7 3.4 0.00012 32.7 4.0 33 61-94 6-39 (227)
404 2gag_A Heterotetrameric sarcos 72.7 2 6.8E-05 42.9 3.1 34 61-95 286-319 (965)
405 4id9_A Short-chain dehydrogena 72.7 4.5 0.00016 34.2 5.1 34 60-94 20-54 (347)
406 2zyd_A 6-phosphogluconate dehy 72.3 3.6 0.00012 37.7 4.6 34 59-93 15-48 (480)
407 3d4o_A Dipicolinate synthase s 72.2 4.2 0.00014 34.4 4.7 33 60-93 156-188 (293)
408 3ond_A Adenosylhomocysteinase; 72.2 3.6 0.00012 38.2 4.5 33 60-93 266-298 (488)
409 1hyh_A L-hicdh, L-2-hydroxyiso 72.2 3.3 0.00011 35.4 4.0 32 62-93 4-36 (309)
410 3l6d_A Putative oxidoreductase 72.0 3.8 0.00013 34.9 4.4 33 60-93 10-42 (306)
411 1pgj_A 6PGDH, 6-PGDH, 6-phosph 71.9 3.6 0.00012 37.6 4.5 31 61-92 3-33 (478)
412 1lnq_A MTHK channels, potassiu 71.8 2.3 8E-05 36.5 3.0 32 61-94 117-148 (336)
413 4ina_A Saccharopine dehydrogen 71.8 4.4 0.00015 36.2 4.9 31 62-92 4-36 (405)
414 2ph5_A Homospermidine synthase 71.7 2.8 9.6E-05 38.8 3.7 34 59-92 13-49 (480)
415 2wtb_A MFP2, fatty acid multif 71.7 3.5 0.00012 39.9 4.5 32 61-93 314-345 (725)
416 2rir_A Dipicolinate synthase, 71.6 4.4 0.00015 34.4 4.7 33 60-93 158-190 (300)
417 1x0v_A GPD-C, GPDH-C, glycerol 71.6 2.2 7.5E-05 36.7 2.8 34 61-94 10-49 (354)
418 3ko8_A NAD-dependent epimerase 71.5 4.8 0.00016 33.4 4.9 31 62-93 3-34 (312)
419 2z1m_A GDP-D-mannose dehydrata 71.4 4.9 0.00017 33.7 4.9 31 62-93 6-37 (345)
420 2hk9_A Shikimate dehydrogenase 71.3 3.4 0.00011 34.7 3.8 33 60-93 130-162 (275)
421 1yqg_A Pyrroline-5-carboxylate 71.1 3.6 0.00012 33.6 4.0 32 62-93 3-34 (263)
422 2o3j_A UDP-glucose 6-dehydroge 71.0 2.9 0.0001 38.3 3.6 32 61-92 11-43 (481)
423 3b1f_A Putative prephenate deh 70.8 3.7 0.00013 34.2 4.0 32 61-92 8-40 (290)
424 1yb4_A Tartronic semialdehyde 70.6 2.8 9.6E-05 34.9 3.2 29 61-90 5-33 (295)
425 4b4o_A Epimerase family protei 70.5 5.6 0.00019 33.0 5.1 31 62-93 3-34 (298)
426 1yj8_A Glycerol-3-phosphate de 70.5 3.1 0.00011 36.4 3.6 34 61-94 23-62 (375)
427 4b63_A L-ornithine N5 monooxyg 70.4 4.8 0.00016 36.8 5.0 35 61-95 248-283 (501)
428 2rcy_A Pyrroline carboxylate r 70.3 3.9 0.00013 33.4 4.0 34 61-94 6-42 (262)
429 3k30_A Histamine dehydrogenase 70.3 3.7 0.00013 39.1 4.3 34 61-95 525-560 (690)
430 2pgd_A 6-phosphogluconate dehy 70.2 4.2 0.00014 37.2 4.5 32 61-93 4-35 (482)
431 3ojo_A CAP5O; rossmann fold, c 70.2 3.2 0.00011 37.8 3.7 33 60-93 12-44 (431)
432 4a7p_A UDP-glucose dehydrogena 70.1 4.8 0.00016 36.7 4.9 35 59-94 8-42 (446)
433 3qsg_A NAD-binding phosphogluc 70.0 3.6 0.00012 35.2 3.8 32 60-92 25-57 (312)
434 3d1l_A Putative NADP oxidoredu 69.8 3.7 0.00013 33.8 3.7 31 61-92 12-43 (266)
435 1leh_A Leucine dehydrogenase; 69.8 4.6 0.00016 35.9 4.5 31 60-91 174-204 (364)
436 4fk1_A Putative thioredoxin re 69.7 6.2 0.00021 32.8 5.2 36 60-95 147-182 (304)
437 2d5c_A AROE, shikimate 5-dehyd 69.6 4.8 0.00016 33.4 4.4 32 61-93 118-149 (263)
438 3gt0_A Pyrroline-5-carboxylate 69.4 4.9 0.00017 32.9 4.4 32 61-93 4-39 (247)
439 3nkl_A UDP-D-quinovosamine 4-d 69.3 5.3 0.00018 29.4 4.2 31 60-90 5-36 (141)
440 2ydy_A Methionine adenosyltran 69.3 5.1 0.00017 33.3 4.5 30 62-92 5-35 (315)
441 3ruf_A WBGU; rossmann fold, UD 69.3 5.9 0.0002 33.5 5.0 34 60-94 26-60 (351)
442 4ezb_A Uncharacterized conserv 69.3 5.4 0.00018 34.2 4.8 33 61-93 26-58 (317)
443 1tt5_B Ubiquitin-activating en 69.2 4.7 0.00016 36.7 4.6 36 58-93 39-74 (434)
444 3jyo_A Quinate/shikimate dehyd 69.1 5.4 0.00019 34.0 4.7 34 60-93 128-161 (283)
445 1y8q_A Ubiquitin-like 1 activa 69.1 3.9 0.00013 35.9 3.9 36 58-93 35-70 (346)
446 1cyd_A Carbonyl reductase; sho 69.0 5.7 0.00019 31.8 4.6 30 62-92 10-40 (244)
447 1eq2_A ADP-L-glycero-D-mannohe 69.0 6.5 0.00022 32.4 5.1 33 62-94 2-35 (310)
448 2vhw_A Alanine dehydrogenase; 68.9 5.2 0.00018 35.4 4.7 33 60-93 169-201 (377)
449 2ahr_A Putative pyrroline carb 68.8 5.4 0.00018 32.6 4.5 32 61-93 5-36 (259)
450 3n74_A 3-ketoacyl-(acyl-carrie 68.8 5.3 0.00018 32.5 4.5 32 61-93 11-43 (261)
451 1pjc_A Protein (L-alanine dehy 68.7 5.3 0.00018 35.0 4.7 33 60-93 168-200 (361)
452 2pzm_A Putative nucleotide sug 68.6 5.3 0.00018 33.7 4.6 32 61-93 22-54 (330)
453 3s2u_A UDP-N-acetylglucosamine 68.6 4.6 0.00016 35.1 4.3 28 61-89 4-36 (365)
454 1n7h_A GDP-D-mannose-4,6-dehyd 68.4 6.2 0.00021 33.9 5.1 33 61-94 30-63 (381)
455 1y1p_A ARII, aldehyde reductas 68.3 5.7 0.00019 33.2 4.7 31 61-92 13-44 (342)
456 3gvi_A Malate dehydrogenase; N 68.3 5.3 0.00018 34.8 4.5 34 60-94 8-42 (324)
457 3oig_A Enoyl-[acyl-carrier-pro 68.2 5.8 0.0002 32.4 4.6 30 62-92 10-42 (266)
458 3pid_A UDP-glucose 6-dehydroge 68.0 5.1 0.00018 36.4 4.5 31 61-93 38-68 (432)
459 3zwc_A Peroxisomal bifunctiona 68.0 4.9 0.00017 39.1 4.7 33 60-93 317-349 (742)
460 1x13_A NAD(P) transhydrogenase 67.9 5.2 0.00018 35.8 4.5 35 59-94 172-206 (401)
461 2bll_A Protein YFBG; decarboxy 67.9 6.6 0.00023 32.9 5.0 32 62-93 3-35 (345)
462 4e21_A 6-phosphogluconate dehy 67.7 5.4 0.00018 35.1 4.5 34 59-93 22-55 (358)
463 2q3e_A UDP-glucose 6-dehydroge 67.7 3.6 0.00012 37.4 3.5 33 61-93 7-40 (467)
464 4dio_A NAD(P) transhydrogenase 67.7 5.3 0.00018 36.1 4.5 35 59-94 190-224 (405)
465 1oju_A MDH, malate dehydrogena 67.6 4.3 0.00015 34.8 3.8 32 62-93 3-35 (294)
466 2bka_A CC3, TAT-interacting pr 67.6 5.8 0.0002 31.6 4.4 33 61-94 20-55 (242)
467 2p5y_A UDP-glucose 4-epimerase 67.6 6 0.0002 32.9 4.6 30 62-92 3-33 (311)
468 2x4g_A Nucleoside-diphosphate- 67.5 6.8 0.00023 32.8 5.0 33 61-94 15-48 (342)
469 3u62_A Shikimate dehydrogenase 67.5 6.2 0.00021 33.0 4.7 33 61-93 110-142 (253)
470 3p7m_A Malate dehydrogenase; p 67.4 5.6 0.00019 34.5 4.5 33 61-94 7-40 (321)
471 3pqe_A L-LDH, L-lactate dehydr 67.4 4.4 0.00015 35.4 3.8 32 61-92 7-39 (326)
472 3m2p_A UDP-N-acetylglucosamine 67.4 6.1 0.00021 32.9 4.7 30 62-92 5-35 (311)
473 2i6t_A Ubiquitin-conjugating e 67.4 4.4 0.00015 34.9 3.8 33 60-93 15-49 (303)
474 2b69_A UDP-glucuronate decarbo 67.3 6 0.00021 33.4 4.7 32 61-93 29-61 (343)
475 1qyc_A Phenylcoumaran benzylic 67.1 4.9 0.00017 33.3 4.0 31 62-93 7-38 (308)
476 1ff9_A Saccharopine reductase; 67.1 5.2 0.00018 36.3 4.4 31 61-92 5-35 (450)
477 2p4q_A 6-phosphogluconate dehy 67.0 5.7 0.00019 36.6 4.7 35 58-93 9-43 (497)
478 1pjq_A CYSG, siroheme synthase 66.9 5.5 0.00019 36.2 4.5 32 60-92 13-44 (457)
479 2iz1_A 6-phosphogluconate dehy 66.9 5.4 0.00018 36.4 4.5 33 60-93 6-38 (474)
480 2pd4_A Enoyl-[acyl-carrier-pro 66.9 6.3 0.00021 32.5 4.6 31 62-93 9-42 (275)
481 3tnl_A Shikimate dehydrogenase 66.7 6.7 0.00023 34.1 4.8 33 60-92 155-187 (315)
482 1wdk_A Fatty oxidation complex 66.6 4.1 0.00014 39.3 3.8 32 61-93 316-347 (715)
483 2wm3_A NMRA-like family domain 66.5 6.1 0.00021 32.7 4.4 34 61-94 7-41 (299)
484 1sb8_A WBPP; epimerase, 4-epim 66.4 6.4 0.00022 33.4 4.7 32 61-93 29-61 (352)
485 1np3_A Ketol-acid reductoisome 66.2 5.8 0.0002 34.4 4.4 32 61-93 18-49 (338)
486 1y6j_A L-lactate dehydrogenase 66.2 6 0.0002 34.1 4.4 35 59-93 7-42 (318)
487 3slg_A PBGP3 protein; structur 66.1 6.1 0.00021 33.8 4.5 34 61-94 26-60 (372)
488 4g65_A TRK system potassium up 66.0 6 0.0002 36.0 4.6 33 60-94 236-268 (461)
489 3o8q_A Shikimate 5-dehydrogena 65.9 7.6 0.00026 33.0 5.0 34 60-93 127-160 (281)
490 1l7d_A Nicotinamide nucleotide 65.9 6.1 0.00021 34.9 4.5 35 59-94 172-206 (384)
491 3pwz_A Shikimate dehydrogenase 65.8 7 0.00024 33.1 4.7 33 60-92 121-153 (272)
492 3sc6_A DTDP-4-dehydrorhamnose 65.6 4.8 0.00017 33.0 3.6 30 62-92 8-38 (287)
493 3nv9_A Malic enzyme; rossmann 65.6 9.7 0.00033 35.2 5.8 36 58-93 218-255 (487)
494 3ktd_A Prephenate dehydrogenas 65.6 6.1 0.00021 34.7 4.4 32 61-93 10-41 (341)
495 3c1o_A Eugenol synthase; pheny 65.6 6.3 0.00022 32.9 4.4 31 62-93 7-38 (321)
496 3i6i_A Putative leucoanthocyan 65.4 7.2 0.00025 33.1 4.8 32 61-93 12-44 (346)
497 3lk7_A UDP-N-acetylmuramoylala 65.3 6.2 0.00021 35.5 4.6 32 61-93 11-42 (451)
498 4aj2_A L-lactate dehydrogenase 65.2 6.6 0.00023 34.4 4.5 34 59-92 19-53 (331)
499 3d3w_A L-xylulose reductase; u 65.2 7.5 0.00026 31.1 4.6 30 62-92 10-40 (244)
500 1xq6_A Unknown protein; struct 65.2 7.9 0.00027 30.6 4.8 32 62-93 7-40 (253)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=8.4e-38 Score=297.83 Aligned_cols=158 Identities=37% Similarity=0.676 Sum_probs=136.1
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC--Ccccccchhhhhcc-CCCCCCccccCCCccccccccCCcee
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE--TEITDVPVLSLYLH-KSRFDWKYRTQPGTTACQAMKDKRCV 135 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~--~~~~~~p~~~~~~~-~~~~~w~~~t~p~~~~~~~~~~~~~~ 135 (224)
+|||||||+|+|||++|.||+|+++++|||||||+.. .....+|.....+. ++.++|+|.++||+ .++++.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~----~~~~r~~~ 77 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQA----GYNGRSIA 77 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCG----GGTTCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCC----CCCCceEe
Confidence 6999999999999999999999878999999999865 23345676544444 47899999999997 46889999
Q ss_pred eccceEecCCccccceeeecCChhhhHHHhhC-CCCCCChhchHHHHHHHHhcCCCCC------CCCCCCCCCCcceEEe
Q psy7388 136 WTRGKVIGGSSVLNTMLYVRGNRRDFDQWAAD-GNEGWSYEEVLPYFKKSMDQRNPYL------AKIDRYHATGGYLTVQ 208 (224)
Q Consensus 136 ~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~-G~~gWsy~~l~pyf~k~E~~~~p~~------~~~~~~hg~~Gpl~v~ 208 (224)
|+|||+|||||+||+|+|+|+++.|||.|++. |+++|+|++|+|||+|+|++..|.. ..+..+||.+||++|+
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999987 9999999999999999999876532 1234689999999999
Q ss_pred eCCCCChhhhhc
Q psy7388 209 DSPWNTPLGFRC 220 (224)
Q Consensus 209 ~~~~~~~~~~~~ 220 (224)
++++..|+.+++
T Consensus 158 ~~~~~~~~~~~~ 169 (566)
T 3fim_B 158 LPGFPTPLDDRV 169 (566)
T ss_dssp SCSSCCTHHHHH
T ss_pred cCCCCCHHHHHH
Confidence 998888766543
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=2.1e-37 Score=296.08 Aligned_cols=157 Identities=25% Similarity=0.403 Sum_probs=129.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCC---cccccchhhhhccCCCCCCccccCCCccccccccCCce
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHET---EITDVPVLSLYLHKSRFDWKYRTQPGTTACQAMKDKRC 134 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~---~~~~~p~~~~~~~~~~~~w~~~t~p~~~~~~~~~~~~~ 134 (224)
++|||||||+|+|||++|.||+|+++++|||||||++.. +....|.....+..+.++|+|.++||. +.++.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r~~ 92 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQTA 92 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSCCC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCCee
Confidence 579999999999999999999999889999999999422 122334333334467899999999985 467889
Q ss_pred eeccceEecCCccccceeeecCChhhhHHHhhCCCC-CCChhchHHHHHHHHhcCCCCC-------CCCCCCCCCCcceE
Q psy7388 135 VWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNE-GWSYEEVLPYFKKSMDQRNPYL-------AKIDRYHATGGYLT 206 (224)
Q Consensus 135 ~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~G~~-gWsy~~l~pyf~k~E~~~~p~~-------~~~~~~hg~~Gpl~ 206 (224)
.|+|||+|||||+||+|+|.|+++.|||.|++.|++ +|+|++|+|||+|+|++..|.. ..+..+||.+|||+
T Consensus 93 ~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~ 172 (583)
T 3qvp_A 93 LIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVH 172 (583)
T ss_dssp EECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEE
T ss_pred eccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEE
Confidence 999999999999999999999999999999999988 9999999999999999876531 13356899999999
Q ss_pred EeeC---CCCChhhhh
Q psy7388 207 VQDS---PWNTPLGFR 219 (224)
Q Consensus 207 v~~~---~~~~~~~~~ 219 (224)
|+++ ....|+.++
T Consensus 173 v~~~~~~~~~~~~~~~ 188 (583)
T 3qvp_A 173 AGPRDTGDDYSPIVKA 188 (583)
T ss_dssp EBCCCCSSCBCTHHHH
T ss_pred ecCCCCcccCCHHHHH
Confidence 9987 233454433
No 3
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=4.3e-35 Score=273.17 Aligned_cols=154 Identities=38% Similarity=0.683 Sum_probs=129.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCCc-ccccchhhhhccCCCCCCccccCCCccccccccCCceee
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETE-ITDVPVLSLYLHKSRFDWKYRTQPGTTACQAMKDKRCVW 136 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~~-~~~~p~~~~~~~~~~~~w~~~t~p~~~~~~~~~~~~~~~ 136 (224)
.+|||||||||+|||++|+||||++++||||||||+.... ....|.....++.++++|+|.++||.. +.++.+.|
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~~~~~ 91 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGRAHHW 91 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTBCCEE
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCCeEec
Confidence 4799999999999999999999988899999999986432 234455555566788999999999974 57888999
Q ss_pred ccceEecCCccccceeeecCChhhhHHHhh-CCCCCCChhchHHHHHHHHhcCCCCCCCCCCCCCCCcceEEeeCCC-CC
Q psy7388 137 TRGKVIGGSSVLNTMLYVRGNRRDFDQWAA-DGNEGWSYEEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPW-NT 214 (224)
Q Consensus 137 ~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~-~G~~gWsy~~l~pyf~k~E~~~~p~~~~~~~~hg~~Gpl~v~~~~~-~~ 214 (224)
+|||+|||||+||+|+|+|+++.|||.|++ .++.+|+|++++|||+|+|+..... ...|+..||+.+..+.. ..
T Consensus 92 ~rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~----~~~~~~~g~~~~~~~~~~~~ 167 (526)
T 3t37_A 92 ARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGG----DGIHGKGGPLPIHLPADEVS 167 (526)
T ss_dssp CCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTT----SSSSCSSCSEECBCCSTTSC
T ss_pred cCccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCC----ccccCcCCCcCcccccccCC
Confidence 999999999999999999999999999976 6789999999999999999875432 34789999999987643 35
Q ss_pred hhhhh
Q psy7388 215 PLGFR 219 (224)
Q Consensus 215 ~~~~~ 219 (224)
|+.++
T Consensus 168 p~~~~ 172 (526)
T 3t37_A 168 PLARA 172 (526)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.3e-35 Score=283.18 Aligned_cols=149 Identities=36% Similarity=0.658 Sum_probs=126.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCC---cccccchhhhhccCCCCCCccccCCCccccccccCCce
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHET---EITDVPVLSLYLHKSRFDWKYRTQPGTTACQAMKDKRC 134 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~---~~~~~p~~~~~~~~~~~~w~~~t~p~~~~~~~~~~~~~ 134 (224)
++|||||||+|+|||++|.||+|+++++|||||+|+... +...+|.....+..+.++|+|.++ +.++.+
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~--------~~~r~~ 76 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT--------MVRRDD 76 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE--------EEEETT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE--------ECCccc
Confidence 579999999999999999999999889999999998732 234567665556678899999987 234445
Q ss_pred e------eccceEecCCccccceeeecCChhhhHHHhhCCCCCCChhchHHHHHHHHhcCCCCCC--CCCCCCCCCcceE
Q psy7388 135 V------WTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEVLPYFKKSMDQRNPYLA--KIDRYHATGGYLT 206 (224)
Q Consensus 135 ~------~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~G~~gWsy~~l~pyf~k~E~~~~p~~~--~~~~~hg~~Gpl~ 206 (224)
. |+|||+|||||++|+|+|.|+++.|||.|++.|+++|+|++++|||+|+|++..+... .+..+||.+|||+
T Consensus 77 ~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~ 156 (577)
T 3q9t_A 77 YERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIP 156 (577)
T ss_dssp EEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEE
T ss_pred cccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEE
Confidence 5 9999999999999999999999999999999999999999999999999998765321 2234799999999
Q ss_pred EeeCCCCC
Q psy7388 207 VQDSPWNT 214 (224)
Q Consensus 207 v~~~~~~~ 214 (224)
|+++++..
T Consensus 157 v~~~~~~~ 164 (577)
T 3q9t_A 157 ISHAELID 164 (577)
T ss_dssp EEECCCCG
T ss_pred eeCCCCCc
Confidence 99987654
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=99.98 E-value=1.2e-32 Score=262.95 Aligned_cols=156 Identities=29% Similarity=0.489 Sum_probs=127.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCCc--ccc-cchhhhhccCCCCCCccccCCCccccccccCCce
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETE--ITD-VPVLSLYLHKSRFDWKYRTQPGTTACQAMKDKRC 134 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~~--~~~-~p~~~~~~~~~~~~w~~~t~p~~~~~~~~~~~~~ 134 (224)
.+|||||||+|++|+++|.||+++++++|||||+|..... ..+ +|.....+..+.++|.|.++| .++++.+
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~~ 96 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRTN 96 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCcee
Confidence 5799999999999999999999965699999999986532 123 555443344567899999887 2467889
Q ss_pred eeccceEecCCccccceeeecCChhhhHHHhhC-CCCCCChhchHHHHHHHHhcCCCC-------CCCCCCCCCCCcceE
Q psy7388 135 VWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAAD-GNEGWSYEEVLPYFKKSMDQRNPY-------LAKIDRYHATGGYLT 206 (224)
Q Consensus 135 ~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~-G~~gWsy~~l~pyf~k~E~~~~p~-------~~~~~~~hg~~Gpl~ 206 (224)
.++|||+|||||+||+|+|+|+++.|||.|+.. |+++|+|++|+|||+|+|++..+. ...+..+||.+|||+
T Consensus 97 ~~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~ 176 (587)
T 1gpe_A 97 NIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQ 176 (587)
T ss_dssp EECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEE
T ss_pred eeeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEE
Confidence 999999999999999999999999999999987 999999999999999999987652 112356899999999
Q ss_pred EeeC---CCCChhhhh
Q psy7388 207 VQDS---PWNTPLGFR 219 (224)
Q Consensus 207 v~~~---~~~~~~~~~ 219 (224)
|+++ ...+|+.++
T Consensus 177 v~~~~~~~~~~~~~~~ 192 (587)
T 1gpe_A 177 SGARDNGQPWSPIMKA 192 (587)
T ss_dssp EBCCCCSSCBCTHHHH
T ss_pred EccCCCcCCCCHHHHH
Confidence 9976 244554443
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=99.97 E-value=6.4e-31 Score=248.84 Aligned_cols=156 Identities=33% Similarity=0.535 Sum_probs=129.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCCc--ccccchhhhhccCCCCCCccccCCCccccccccCCcee
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETE--ITDVPVLSLYLHKSRFDWKYRTQPGTTACQAMKDKRCV 135 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~~--~~~~p~~~~~~~~~~~~w~~~t~p~~~~~~~~~~~~~~ 135 (224)
.+||+||||+|++|+++|.||+++++.+|||||+|+.... ..++|........+.++|.|.++||+. .++.+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~ 86 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMR 86 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEE
Confidence 4799999999999999999999986699999999986532 234454322223567899999999873 567899
Q ss_pred eccceEecCCccccceeeecCChhhhHHHhh-CCCCCCChhchHHHHHHHHhcCCCCCCCCCCCCCCCcceEEeeCCCCC
Q psy7388 136 WTRGKVIGGSSVLNTMLYVRGNRRDFDQWAA-DGNEGWSYEEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPWNT 214 (224)
Q Consensus 136 ~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~-~G~~gWsy~~l~pyf~k~E~~~~p~~~~~~~~hg~~Gpl~v~~~~~~~ 214 (224)
++|||+|||+|++|+|+|+|+++.||+.|++ +|+++|+|++|+|||+|+|++..+.. +..+||.+||++++.+.+..
T Consensus 87 ~~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~--~~~~~g~~Gpl~v~~~~~~~ 164 (546)
T 2jbv_A 87 HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGP--DAPHHGDSGPVHLMNVPPKD 164 (546)
T ss_dssp ECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBT--TBTTSCBSCSEEEEECCSCC
T ss_pred eecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCC--ccccCCCCCCEEEecCCCCC
Confidence 9999999999999999999999999999998 89999999999999999999876321 13589999999999887777
Q ss_pred hhhhhc
Q psy7388 215 PLGFRC 220 (224)
Q Consensus 215 ~~~~~~ 220 (224)
++.+++
T Consensus 165 ~~~~~~ 170 (546)
T 2jbv_A 165 PTGVAL 170 (546)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765543
No 7
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.91 E-value=8.6e-25 Score=204.91 Aligned_cols=127 Identities=19% Similarity=0.211 Sum_probs=101.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCCcccccch---hhhhc-cCCCCCCccccCCCccc-------
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPV---LSLYL-HKSRFDWKYRTQPGTTA------- 125 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~~~~~~p~---~~~~~-~~~~~~w~~~t~p~~~~------- 125 (224)
..+||+||||+|++|+++|.||++.+ .+|+|||+|..... ..|. +.... ...+++|.|.++||...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~-~~v~~~e~~~~~~~--~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~ 85 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAG-IPTQIVEMGRSWDT--PGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGI 85 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSCCSCS--CCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCC-CcEEEEECCCCCCC--CCCcccccccccccccccccccccccccccccccccc
Confidence 35799999999999999999999965 99999999986432 1222 11111 23468999999887210
Q ss_pred ----cccc------cCCceeeccceEecCCccccceeeecCChhhhHHHhhCCCCCCChhchH-HHHHHHHhcCCC
Q psy7388 126 ----CQAM------KDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEVL-PYFKKSMDQRNP 190 (224)
Q Consensus 126 ----~~~~------~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~G~~gWsy~~l~-pyf~k~E~~~~p 190 (224)
+... .++.+.++|||+|||||+||+|+|+|+++.|||.|. ++|.|++|+ |||+|+|++..+
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~ 157 (507)
T 1coy_A 86 NKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGV 157 (507)
T ss_dssp CCBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTC
T ss_pred ccccccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCC
Confidence 1122 567889999999999999999999999999999996 589999999 999999997653
No 8
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.90 E-value=3.1e-24 Score=200.88 Aligned_cols=127 Identities=20% Similarity=0.216 Sum_probs=100.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCCc-cc--ccchhhhhccCCCCCCccccCCCc-----------
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETE-IT--DVPVLSLYLHKSRFDWKYRTQPGT----------- 123 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~~-~~--~~p~~~~~~~~~~~~w~~~t~p~~----------- 123 (224)
.+||+||||+|++|+++|.+|++.+ ++|+|||+|..... .. ..+... ......++|.|.++||.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~-~~v~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~w~~~t~p~~~~~~l~~~~~~ 81 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAG-VQTLMLEMGQLWNQPGPDGNIFCGM-LNPDKRSSWFKNRTEAPLGSFLWLDVVN 81 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSCCCCCCCTTSSSSCCT-TSCCGGGSBSCSBCCCCTTCHHHHGGGC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC-CcEEEEeCCCCCCCCCCcccccccc-cccCcccccccccccccccccccccccc
Confidence 4799999999999999999999965 99999999985331 11 222111 12234578999998872
Q ss_pred ---ccccc----ccCCceeeccceEecCCccccceeeecCChhhhHHHhhCCCCCCChhchH-HHHHHHHhcCCC
Q psy7388 124 ---TACQA----MKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEVL-PYFKKSMDQRNP 190 (224)
Q Consensus 124 ---~~~~~----~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~G~~gWsy~~l~-pyf~k~E~~~~p 190 (224)
..+.+ ..++.+.|+|||+|||||+||+|+|+|+++.|||.|. ++|+|++|+ |||+|+|++..+
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~ 152 (504)
T 1n4w_A 82 RNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRV 152 (504)
T ss_dssp CBCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTC
T ss_pred ccccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCC
Confidence 11111 1677899999999999999999999999999999996 689999999 999999997643
No 9
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.89 E-value=5.7e-24 Score=200.78 Aligned_cols=119 Identities=29% Similarity=0.433 Sum_probs=91.6
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCC--cccccc-hhhhhccCCCCCCccccCCCccccccccCCc
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHET--EITDVP-VLSLYLHKSRFDWKYRTQPGTTACQAMKDKR 133 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~--~~~~~p-~~~~~~~~~~~~w~~~t~p~~~~~~~~~~~~ 133 (224)
..+|||||||||+|||++|.||+| + .+|||||+|+... .....| .+...+.. .+| |.++||.. +.++.
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g-~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~--~~~-~~t~~q~~----~~~~~ 94 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-K-YKVLVLERGSLPTAYPNVLTADGFVYNLQQ--EDD-GKTPVERF----VSEDG 94 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-T-SCEEEECSSBCGGGSGGGGBGGGHHHHHHS--CCC-SSSSEEEE----ECTTS
T ss_pred cCcccEEEECccHHHHHHHHHHhc-C-CcEEEEecCCCcCCCcceecchhHhhhccC--CCc-CcCCCccc----cCCCc
Confidence 357999999999999999999999 5 8999999998642 111222 22111111 245 66777653 34667
Q ss_pred eeeccceEecCCccccceeeecCChhhhHHHhhCCCCCCChhchHHHHHHHHhcC
Q psy7388 134 CVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEVLPYFKKSMDQR 188 (224)
Q Consensus 134 ~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~G~~gWsy~~l~pyf~k~E~~~ 188 (224)
+.++|||+|||+|+||+|+|+|+++.||+.+ | .+|+|++++|||+|+|+..
T Consensus 95 ~~~~rg~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~ 145 (536)
T 1ju2_A 95 IDNVRGRVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTI 145 (536)
T ss_dssp CEEEEECBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHH
T ss_pred ceeecceeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhccc
Confidence 8899999999999999999999999999742 2 2599999999999999853
No 10
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.79 E-value=1.6e-19 Score=169.95 Aligned_cols=121 Identities=33% Similarity=0.496 Sum_probs=82.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCCccc--cc-chhhhhccCCCCCCc-----cccCCCccccccc
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEIT--DV-PVLSLYLHKSRFDWK-----YRTQPGTTACQAM 129 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~~~~--~~-p~~~~~~~~~~~~w~-----~~t~p~~~~~~~~ 129 (224)
.+|||||||+|++|+++|.||++++ ++|||||+|+...... .+ +..........+++. ....+... .
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g-~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~ 80 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAG-KKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPF----W 80 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCSCCT----T
T ss_pred CceeEEEECcCHHHHHHHHHHHhCC-CeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCCCcc----c
Confidence 5799999999999999999999986 8999999998543110 00 000000000000000 00001100 0
Q ss_pred cCCceeeccceEecCCccccceeeecCChhhhHH---HhhCCCCCCChhchHHHHHHHHhcCC
Q psy7388 130 KDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQ---WAADGNEGWSYEEVLPYFKKSMDQRN 189 (224)
Q Consensus 130 ~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~---w~~~G~~gWsy~~l~pyf~k~E~~~~ 189 (224)
......+++|++|||+|++|+|+|+|+++.||+. |. .+|+|++ |||+|+|+...
T Consensus 81 ~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~----~~w~~~~--p~~~k~e~~~~ 137 (546)
T 1kdg_A 81 WCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWP----SSWTNHA--PYTSKLSSRLP 137 (546)
T ss_dssp BCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCC----GGGSCCH--HHHHHHHHHSC
T ss_pred cccccccccceeecccccccceEEecCChHHhcCcccCc----cccCccc--HHHHHHHhcCC
Confidence 1123557899999999999999999999999998 83 6899998 99999998653
No 11
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.66 E-value=1.7e-08 Score=80.76 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|++|||+|+||+++|..|++.+ .+|+|||+.+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G-~~V~v~Ek~~~ 36 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CCEEEEECCCC
Confidence 589999999999999999999997 99999999754
No 12
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.56 E-value=3.5e-08 Score=86.41 Aligned_cols=36 Identities=33% Similarity=0.561 Sum_probs=33.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++||+||||+|++|+++|..|++.| .+|+|||+.+.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G-~~V~v~Er~~~ 38 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYG-LKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CcEEEEeCCCC
Confidence 3699999999999999999999997 99999999764
No 13
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.37 E-value=6e-07 Score=86.03 Aligned_cols=38 Identities=29% Similarity=0.568 Sum_probs=33.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
..+||+||||+|.+|+.+|..|++.+ .+|+|||++...
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G-~~V~liE~~~~~ 81 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAG-YKVAMFDIGEID 81 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCCC
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCC-CcEEEEeccCCC
Confidence 35799999999999999999999987 899999998753
No 14
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.29 E-value=4.8e-07 Score=78.56 Aligned_cols=35 Identities=34% Similarity=0.529 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++||+||||+|.+|+.+|.+|++.+ .+|+|||++.
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G-~~V~vlE~~~ 37 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGG-HEVLVAEAAE 37 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC-CeEEEEeCCC
Confidence 4699999999999999999999987 8999999985
No 15
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.28 E-value=5.6e-07 Score=77.46 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++||+||||+|+||..+|.+|++.+ .+|+|+|++.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g-~~v~lie~~~ 39 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRAR-KQIALFDNNT 39 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTT-CCEEEEECSC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence 5799999999999999999999986 8999999874
No 16
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.26 E-value=7e-07 Score=76.78 Aligned_cols=35 Identities=29% Similarity=0.534 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|+||..+|.+|++.+ .+|+|+|++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g-~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRAN-LKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC-CCEEEEecCC
Confidence 3699999999999999999999987 8999999874
No 17
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.25 E-value=5.7e-07 Score=76.91 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+.||+||||+|+||..+|.+|++.+ .+|+|+|++.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g-~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSS-LKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CCEEEEecCC
Confidence 4699999999999999999999987 8999999864
No 18
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.24 E-value=7.5e-07 Score=79.14 Aligned_cols=36 Identities=39% Similarity=0.609 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+++|+||||+|.+|+.+|..|++.+ .+|+|||++..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G-~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERG-HRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCCC
Confidence 4699999999999999999999997 89999999864
No 19
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.23 E-value=6.3e-07 Score=81.92 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=33.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
..+|+||||||.+|+++|.+|++..+.+|+|||+....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 46999999999999999999998534899999997653
No 20
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.20 E-value=1.2e-06 Score=78.96 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=33.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~~ 94 (224)
.++|+||||+|.+|+.+|.+|++.+ . +|+|||++..
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G-~~~V~vlE~~~~ 41 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRG-YTNVTVLDPYPV 41 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcC-CCcEEEEeCCCC
Confidence 5799999999999999999999997 7 9999999875
No 21
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.19 E-value=1.3e-06 Score=76.17 Aligned_cols=38 Identities=32% Similarity=0.507 Sum_probs=32.9
Q ss_pred CCcccEEEECCChHHHHHHHHHhc-CCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSE-NPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae-~~~~~VLlLEaG~~ 94 (224)
..++|+||||+|+||+++|.+|++ ..+.+|+|+|++..
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~ 101 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 357999999999999999999986 33599999999754
No 22
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.18 E-value=1.1e-06 Score=81.63 Aligned_cols=37 Identities=30% Similarity=0.282 Sum_probs=34.1
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+||+||||+|.+|+++|.+|++.+ .+|+|||+++.
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G-~~V~vlEk~~~ 75 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAG-ADVLVLERTSG 75 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCC-CcEEEEeCCCC
Confidence 45799999999999999999999997 89999999875
No 23
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.18 E-value=1.3e-06 Score=79.92 Aligned_cols=39 Identities=31% Similarity=0.452 Sum_probs=35.0
Q ss_pred cCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 56 LLMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 56 ~~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
+..++|+||||+|.+|+++|.+|++.| ++|+|||+....
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G-~~V~vlE~~~~~ 46 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDG-KKVLHIDKQDHY 46 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSSS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCC-CeEEEEeCCCCC
Confidence 346799999999999999999999987 899999998654
No 24
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.15 E-value=1.5e-06 Score=76.51 Aligned_cols=37 Identities=30% Similarity=0.530 Sum_probs=33.7
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..++|+||||+|.+|+.+|.+|++.+ .+|+|||++..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G-~~V~llE~~~~ 51 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKEN-KNTALFESGTM 51 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCC-CcEEEEeCCCC
Confidence 35799999999999999999999987 89999999753
No 25
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.14 E-value=1.3e-06 Score=76.94 Aligned_cols=36 Identities=33% Similarity=0.561 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++||+||||+|++|+.+|..|++.+ .+|+|||+...
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G-~~V~l~E~~~~ 38 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYG-LKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCC-CCEEEEeCCCC
Confidence 3699999999999999999999987 89999999874
No 26
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.13 E-value=2.1e-06 Score=75.49 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=33.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
..++|+||||+|.+|+.+|.+|++.+ .+|+|||++.
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G-~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKG-YSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCC-CEEEEEeccC
Confidence 35799999999999999999999987 8999999864
No 27
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.13 E-value=1.8e-06 Score=77.14 Aligned_cols=38 Identities=24% Similarity=0.172 Sum_probs=33.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.+.||+||||+|++|+++|..|++.+ .+|+|||+.+..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G-~~V~v~E~~~~~ 58 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSG-IDCDVYEAVKEI 58 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC-CCEEEEeCCCCC
Confidence 46799999999999999999999997 899999998653
No 28
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.12 E-value=1.7e-06 Score=77.58 Aligned_cols=33 Identities=55% Similarity=0.737 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
||+||||+|.+|+++|.+|++.+ .+|+|||+..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G-~~V~vlE~~~ 34 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAG-KKVLLLEGGE 34 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcC-CeEEEEecCC
Confidence 89999999999999999999997 8999999954
No 29
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.12 E-value=2.1e-06 Score=75.60 Aligned_cols=35 Identities=26% Similarity=0.437 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|+||||+|.+|+.+|.+|++.+ .+|+|||++.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G-~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRG-EEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCC
Confidence 5799999999999999999999987 8999999984
No 30
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.09 E-value=2.2e-06 Score=75.37 Aligned_cols=35 Identities=37% Similarity=0.536 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|+||||+|.+|+.+|.+|++.+ .+|+|||++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G-~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQG-VKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC-CeEEEEeCCCC
Confidence 699999999999999999999987 89999999864
No 31
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.08 E-value=2.4e-06 Score=76.23 Aligned_cols=35 Identities=31% Similarity=0.547 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|+||||+|++|+.+|..|++.+ .+|+|||+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G-~~V~v~E~~~ 38 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSG-FKVKIVEKQK 38 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTT-CCEEEECSSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCC-CCEEEEeCCC
Confidence 3599999999999999999999987 8999999985
No 32
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.08 E-value=2.6e-06 Score=73.50 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+|+||||+|++|+++|..|++.+ .+|+|||+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G-~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG-HQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCC-CcEEEEECCCC
Confidence 479999999999999999999987 89999999864
No 33
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.07 E-value=2e-06 Score=75.40 Aligned_cols=35 Identities=29% Similarity=0.501 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|+||||+|.+|+.+|.+|++.+ .+|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G-~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAG-LNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTT-CCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-CeEEEEecCCC
Confidence 589999999999999999999987 89999999864
No 34
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.05 E-value=3e-06 Score=78.95 Aligned_cols=40 Identities=25% Similarity=0.285 Sum_probs=35.7
Q ss_pred hcCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 55 KLLMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 55 ~~~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.+.++||+||||+|.+|+++|.+|++.+ .+|+|||+++..
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~~g-~~v~~~e~~~~~ 55 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSHYG-KKILVLDRNPYY 55 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSSS
T ss_pred cccccCCEEEECCCHHHHHHHHHHHHCC-CcEEEEeccCCC
Confidence 4557899999999999999999999987 899999998754
No 35
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.03 E-value=3.4e-06 Score=75.28 Aligned_cols=34 Identities=29% Similarity=0.355 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+|+||||+|.+|+.+|.+|++.+ .+|+|||++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G-~~V~vlE~~~~ 34 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG-HEVEVFERLPI 34 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CceEEEeCCCC
Confidence 58999999999999999999997 89999999764
No 36
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.03 E-value=3.5e-06 Score=76.84 Aligned_cols=37 Identities=22% Similarity=0.419 Sum_probs=32.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+||+||||+|++|+.+|..|++.+ .+|+|||+++.
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G-~~V~llEk~~~ 61 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRG-RRVLVIDHARA 61 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC-CcEEEEeCCCC
Confidence 45799999999999999999999987 89999999875
No 37
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.03 E-value=3.5e-06 Score=79.56 Aligned_cols=35 Identities=26% Similarity=0.386 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++||+||||+|.+|+.+|..|++.| .+|+|||++.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G-~~V~LlEk~d 51 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRG-IQTGLVEMND 51 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTT-CCEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CcEEEEECCC
Confidence 5799999999999999999999987 9999999984
No 38
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.02 E-value=4.4e-06 Score=69.61 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++||+||||+|++|+.+|..|++.+ .+|+|||++
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g-~~v~lie~~ 35 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKG-VRVGLLTQS 35 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEecC
Confidence 3699999999999999999999986 899999997
No 39
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.02 E-value=3e-06 Score=77.25 Aligned_cols=36 Identities=36% Similarity=0.696 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+||+||||+|++|+++|..|++.+ .+|+|||+.+.
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G-~~V~vlE~~~~ 40 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRG-LKILLVDSKPW 40 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSS-CCEEEECSSCG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC-CCEEEEECCCC
Confidence 4699999999999999999999987 89999999864
No 40
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.01 E-value=3.2e-06 Score=74.74 Aligned_cols=37 Identities=38% Similarity=0.474 Sum_probs=33.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhc-CCCCeEEEeecCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSE-NPNWKVLLLEAGG 93 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae-~~~~~VLlLEaG~ 93 (224)
..++|+||||+|.+|+.+|.+|++ .+..+|+|||++.
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 357999999999999999999999 7547999999986
No 41
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.01 E-value=4.6e-06 Score=71.69 Aligned_cols=37 Identities=43% Similarity=0.600 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+||+||||+|++|+.+|..|++.++.+|+|||+.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 4699999999999999999999962499999999864
No 42
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.01 E-value=3.6e-06 Score=75.90 Aligned_cols=37 Identities=35% Similarity=0.566 Sum_probs=33.6
Q ss_pred CCcccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~ 94 (224)
.+++|+||||+|.+|+++|.+|++. + .+|+|||+...
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g-~~v~v~E~~~~ 42 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLD-KRVLVLERRPH 42 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSC-CCEEEECSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCC-CCEEEEeCCCC
Confidence 3579999999999999999999998 5 89999999864
No 43
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.00 E-value=3.5e-06 Score=76.33 Aligned_cols=36 Identities=25% Similarity=0.385 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++||+||||+|++|+.+|.+|++.+ .+|+|||+++.
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G-~~V~vlEk~~~ 38 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLG-KSVTVFDNGKK 38 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCC-CCEEEEeCCCC
Confidence 3699999999999999999999987 89999999874
No 44
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.98 E-value=4.2e-06 Score=73.15 Aligned_cols=35 Identities=34% Similarity=0.558 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+++|+||||+|.+|+.+|.+|+ .+ .+|+|||++..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G-~~V~vlE~~~~ 42 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AH-GRVVVLEREAQ 42 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TT-SCEEEECSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CC-CCEEEEECCCC
Confidence 4799999999999999999999 45 89999999853
No 45
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.97 E-value=5.2e-06 Score=74.13 Aligned_cols=35 Identities=46% Similarity=0.698 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+||++|||+|.+|+++|.+|++.+ .+|+|||++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g-~~v~v~E~~~~ 35 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLN-KKVLVIEKRNH 35 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGT-CCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC-CcEEEEecCCC
Confidence 389999999999999999999986 89999999864
No 46
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.96 E-value=5.7e-06 Score=75.51 Aligned_cols=36 Identities=44% Similarity=0.725 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+||+||||+|++|+.+|..|++.+ .+|+|||+.+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G-~~V~llEk~~~ 60 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEG-ANVLLLDKGNK 60 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC-CCEEEEECCCC
Confidence 4699999999999999999999987 89999999864
No 47
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.96 E-value=4.5e-06 Score=76.45 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++||+||||+|++|+.+|.+|++.+ .+|+|||+++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G-~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLG-LKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHT-CCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC-CEEEEEeCCC
Confidence 4699999999999999999999987 8999999985
No 48
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.93 E-value=7e-06 Score=73.00 Aligned_cols=37 Identities=24% Similarity=0.417 Sum_probs=33.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|+||||+|++|+.+|..|++.+ .+|+|||+.+..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G-~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQG-HRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC-CcEEEEeCCCCC
Confidence 3699999999999999999999987 899999998643
No 49
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.92 E-value=5.6e-06 Score=74.38 Aligned_cols=36 Identities=33% Similarity=0.566 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcC--CCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSEN--PNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~--~~~~VLlLEaG~~ 94 (224)
+++|+||||+|.+|+.+|..|++. + .+|+|||++..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG-~~V~vlE~~~~ 72 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPG-RSLLLVEEGGL 72 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTT-SCEEEECSSCS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCC-CeEEEEeCCCC
Confidence 469999999999999999999997 6 89999999753
No 50
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.92 E-value=7.3e-06 Score=75.96 Aligned_cols=35 Identities=37% Similarity=0.526 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++||+||||+|.+|+.+|..|++.+ .+|+|||++.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G-~~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRG-LSVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC-CCEEEEECCC
Confidence 3699999999999999999999987 8999999975
No 51
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.92 E-value=9.3e-06 Score=72.45 Aligned_cols=36 Identities=25% Similarity=0.438 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|++|+++|..|++.+ .+|+|||+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G-~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNG-IDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTT-CEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC-CCEEEEeCCCC
Confidence 5699999999999999999999987 89999999764
No 52
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.92 E-value=8.2e-06 Score=70.13 Aligned_cols=36 Identities=25% Similarity=0.454 Sum_probs=32.4
Q ss_pred cCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 56 LLMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 56 ~~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
+..++|+||||+|++|+.+|.+|++.+ .+|+|||+.
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g-~~v~lie~~ 48 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSG-FSVAILDKA 48 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCC-CcEEEEeCC
Confidence 345799999999999999999999987 899999995
No 53
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.92 E-value=7.7e-06 Score=77.93 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+++|+||||+|++|+.+|..|++.+ .+|+|||+...
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G-~~V~LiEr~~~ 57 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLG-HDVTIYERSAF 57 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCC-CCEEEEcCCCC
Confidence 4699999999999999999999987 89999999853
No 54
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.91 E-value=7.4e-06 Score=73.44 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
|+||||+|.+|+.+|.+|++.+ .+|+|||+...
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G-~~V~vlE~~~~ 34 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNG-HEIIVLEKSAM 34 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCCC
Confidence 8999999999999999999987 89999999754
No 55
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.91 E-value=8.2e-06 Score=78.63 Aligned_cols=35 Identities=26% Similarity=0.254 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|+||||+|.+|+.+|.+|++.+ ++|+|||++.
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G-~~V~vlEk~~ 297 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRG-AVVTLYCADA 297 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTT-CCEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC-CcEEEEeCCC
Confidence 4599999999999999999999987 8999999974
No 56
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.91 E-value=6.7e-06 Score=72.90 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=32.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|+||||+|++|+++|..|++.+ .+|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAG-IDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHT-CCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCC-CCEEEEeCCCC
Confidence 589999999999999999999987 89999999864
No 57
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.91 E-value=9.2e-06 Score=75.52 Aligned_cols=39 Identities=31% Similarity=0.325 Sum_probs=34.7
Q ss_pred cCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 56 LLMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 56 ~~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
..+++|+||||+|++|+++|..|++.+ ++|+|||+.+..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G-~~v~vlE~~~~~ 46 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAG-VEVVVLERLVER 46 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTT-CCEEEEESCCC-
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEeCCCCC
Confidence 356899999999999999999999987 999999998653
No 58
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.91 E-value=6.9e-06 Score=77.31 Aligned_cols=36 Identities=33% Similarity=0.396 Sum_probs=33.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+++|+||||+|.+|+.+|..|++.+ .+|+|||+.+.
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G-~~V~vlEk~~~ 160 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSG-AKVILIEKEPV 160 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC-CcEEEEeCCCC
Confidence 4799999999999999999999987 89999999864
No 59
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.90 E-value=8.1e-06 Score=75.18 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|++|+.+|.+|++.+ .+|+|||++.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G-~~V~liEk~~ 59 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALG-KRVAIAEEYR 59 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCc-CEEEEEeCCC
Confidence 4699999999999999999999987 8999999953
No 60
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.90 E-value=8.3e-06 Score=73.07 Aligned_cols=36 Identities=28% Similarity=0.362 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCe-EEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWK-VLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~-VLlLEaG~~ 94 (224)
.++|+||||+|++|+++|..|++.+ .+ |+|||+.+.
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G-~~~v~v~E~~~~ 39 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAG-IGKVTLLESSSE 39 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC-CCeEEEEECCCC
Confidence 3699999999999999999999987 89 999999764
No 61
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.90 E-value=6.4e-06 Score=78.12 Aligned_cols=36 Identities=39% Similarity=0.580 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcC------CCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSEN------PNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~------~~~~VLlLEaG~~ 94 (224)
.+||+||||+|++|+++|.+|++. + .+|+|||++..
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G-~~V~vlEk~~~ 75 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKD-LRVCLVEKAAH 75 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCC-CCEEEECSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCC-CcEEEEeCCCC
Confidence 469999999999999999999987 5 89999999864
No 62
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.89 E-value=8.7e-06 Score=76.99 Aligned_cols=35 Identities=31% Similarity=0.468 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|.+|+.+|..|++.+ .+|+|||++.
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG-~~V~LlE~~~ 65 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASG-IKTGLIEMQD 65 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CcEEEEeCCC
Confidence 4799999999999999999999997 8999999985
No 63
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.89 E-value=7.8e-06 Score=73.26 Aligned_cols=37 Identities=38% Similarity=0.579 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~ 94 (224)
.+||+||||+|++|+.+|..|++. ++.+|+|||++..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 469999999999999999999996 3489999999864
No 64
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.89 E-value=7.2e-06 Score=70.32 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=32.5
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
...+|+||||+|++|+.+|.+|++.+ .+|+|||+.+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~vie~~~ 55 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAE-IKPILYEGMM 55 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTT-CCCEEECCSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEecCC
Confidence 46799999999999999999999987 8999999954
No 65
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.89 E-value=7.8e-06 Score=75.88 Aligned_cols=36 Identities=36% Similarity=0.630 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+||+||||+|++|+.+|..|++.+ .+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G-~~V~liE~~~~ 41 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRG-HRVLLLEREAF 41 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTT-CCEEEECSSCS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCC-CCEEEEccCCC
Confidence 4699999999999999999999986 89999999863
No 66
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.88 E-value=9.8e-06 Score=71.73 Aligned_cols=37 Identities=35% Similarity=0.403 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
..+|+||||+|++|+.+|..|++.+ .+|+|||+.+..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G-~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNG-WDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CCEEEEecCCCC
Confidence 3699999999999999999999987 899999998653
No 67
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.87 E-value=1e-05 Score=74.87 Aligned_cols=36 Identities=36% Similarity=0.561 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|.+|+++|.+|++.+ .+|+|||+...
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G-~~V~vlE~~~~ 38 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSG-LNVVVLEARDR 38 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC-CCEEEEeCCCC
Confidence 4689999999999999999999987 89999999754
No 68
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=97.87 E-value=7.2e-06 Score=74.97 Aligned_cols=33 Identities=36% Similarity=0.431 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++||||||.+|+++|.+|+++| ++|+|||+...
T Consensus 3 ~VvVIGaG~~GL~aA~~La~~G-~~V~VlEa~~~ 35 (501)
T 4dgk_A 3 PTTVIGAGFGGLALAIRLQAAG-IPVLLLEQRDK 35 (501)
T ss_dssp CEEEECCHHHHHHHHHHHHHTT-CCEEEECCC--
T ss_pred CEEEECCcHHHHHHHHHHHHCC-CcEEEEccCCC
Confidence 6999999999999999999997 89999999653
No 69
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.87 E-value=1e-05 Score=73.92 Aligned_cols=35 Identities=31% Similarity=0.430 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|++|+.+|.+|++.+ .+|+|||++.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G-~~V~liEk~~ 38 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALG-KKVAIAEEFR 38 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTT-CCEEEEESSC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCC-CEEEEEeCCC
Confidence 3699999999999999999999987 8999999943
No 70
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.87 E-value=1.2e-05 Score=73.30 Aligned_cols=38 Identities=32% Similarity=0.358 Sum_probs=34.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.+++|+||||+|.+|+++|.+|++.+ ++|+|||+....
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g-~~v~~~e~~~~~ 41 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNG-KKVLHMDRNPYY 41 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCC-CcEEEEecCCCc
Confidence 45799999999999999999999987 899999997643
No 71
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.87 E-value=8.9e-06 Score=74.54 Aligned_cols=35 Identities=37% Similarity=0.709 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|++|+.+|.+|++.+ .+|+|||+.+
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G-~~V~liEk~~ 37 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAK-YNVLMADPKG 37 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECTTS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCC-CeEEEEECCC
Confidence 3699999999999999999999987 8999999654
No 72
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.87 E-value=1e-05 Score=77.57 Aligned_cols=35 Identities=26% Similarity=0.448 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
..+|+||||+|.+|+.+|.+|++.+ ++|+|||+..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G-~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRG-WQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT-CEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCC
Confidence 3599999999999999999999987 8999999964
No 73
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.86 E-value=1.2e-05 Score=74.01 Aligned_cols=34 Identities=41% Similarity=0.562 Sum_probs=31.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
.+||+||||+|+||..+|.+|++.+ .+|+|||++
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G-~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNG-ARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT-CCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CEEEEEEec
Confidence 5799999999999999999999987 899999943
No 74
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.86 E-value=1.2e-05 Score=67.65 Aligned_cols=34 Identities=35% Similarity=0.625 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.||++|||+|++|+.+|.+|++.+ .+|+|+|++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRAR-KNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC-CCEEEEeCCC
Confidence 489999999999999999999987 8999999864
No 75
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.86 E-value=6.9e-06 Score=77.33 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=33.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|.+|+.+|..|++.+ .+|+|||+.+.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G-~~V~vlEk~~~ 155 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAG-ANVILVDKAPF 155 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHT-CCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC-CcEEEEeCCCC
Confidence 5799999999999999999999987 89999999864
No 76
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.86 E-value=1.1e-05 Score=73.39 Aligned_cols=36 Identities=36% Similarity=0.723 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|++|||+|.+|+++|.+|++.+ .+|+|||+...
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g-~~v~v~E~~~~ 63 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSG-QRVLIVDRRPH 63 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCC-CceEEEeccCC
Confidence 5799999999999999999999986 89999999764
No 77
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.85 E-value=1.1e-05 Score=73.23 Aligned_cols=37 Identities=32% Similarity=0.466 Sum_probs=32.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
...+|+||||+|.+|+++|.+|++.+ .+|+|||+...
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g-~~v~v~E~~~~ 50 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRG-TDAVLLESSAR 50 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTT-CCEEEECSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCC-CCEEEEEcCCC
Confidence 35799999999999999999999987 89999999764
No 78
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.85 E-value=7.3e-06 Score=74.10 Aligned_cols=34 Identities=32% Similarity=0.493 Sum_probs=31.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
+++|+||||+|.+|+.+|.+|++.+..+|+|||+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 5799999999999999999999986369999999
No 79
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.84 E-value=1.3e-05 Score=73.23 Aligned_cols=37 Identities=35% Similarity=0.446 Sum_probs=33.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+.+|+||||+|.+|+++|.+|++.+ .+|+|||+...
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g-~~v~v~E~~~~ 45 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAG-YKVTVLEARTR 45 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCC-CCEEEEeccCC
Confidence 35789999999999999999999987 89999999865
No 80
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.84 E-value=1.1e-05 Score=76.74 Aligned_cols=36 Identities=31% Similarity=0.365 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|.+|+.+|.+|++.+ .+|+|||++..
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G-~~V~vlEK~~~ 41 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSG-QTCALLSKVFP 41 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSCG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCC-CcEEEEecCCC
Confidence 4699999999999999999999987 89999999864
No 81
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.84 E-value=1.1e-05 Score=75.97 Aligned_cols=35 Identities=31% Similarity=0.581 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|.+|+.+|.+|++ + .+|+|||++..
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G-~~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-Q-HQVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-T-SCEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-C-CcEEEEECCCC
Confidence 46999999999999999999999 6 89999999864
No 82
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.84 E-value=1.3e-05 Score=73.91 Aligned_cols=36 Identities=36% Similarity=0.575 Sum_probs=31.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+||+||||+|+||+.+|.+|++.+ .+|+|||+.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G-~~V~liEk~~~ 59 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLG-MKVAVVEKRST 59 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT-CCEEEEESSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCC-CeEEEEecCCC
Confidence 4699999999999999999999987 89999998643
No 83
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.83 E-value=1.5e-05 Score=63.07 Aligned_cols=34 Identities=44% Similarity=0.665 Sum_probs=31.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
||++|||+|++|+.+|..|++.+ .+|+|||+++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g-~~v~lie~~~~ 35 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAG-LKVLVLDGGRS 35 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT-CCEEEEECSCC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CcEEEEeCCCC
Confidence 79999999999999999999986 89999999863
No 84
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.83 E-value=1.2e-05 Score=75.98 Aligned_cols=34 Identities=32% Similarity=0.646 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+||+||||+|+||.++|.|+++.+ .||+|||...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G-~kValIE~~~ 75 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHG-ARVLLFDYVK 75 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTT-CCEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-CeEEEEeccc
Confidence 599999999999999999999987 9999999654
No 85
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.83 E-value=1.3e-05 Score=74.20 Aligned_cols=34 Identities=29% Similarity=0.465 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+||+||||+|+||..+|.+|++.+ .+|+|+|+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G-~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHT-DKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTC-SCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC-CcEEEEeCCC
Confidence 599999999999999999999987 8999999975
No 86
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.82 E-value=1.4e-05 Score=74.28 Aligned_cols=37 Identities=32% Similarity=0.354 Sum_probs=33.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|+||||+|++|+++|..|++.+ .+|+|||+.+..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G-~~v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQG-VRVLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTT-CCEEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCC-CCEEEEeCCCCC
Confidence 4699999999999999999999987 899999998753
No 87
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.82 E-value=1.4e-05 Score=67.86 Aligned_cols=34 Identities=26% Similarity=0.291 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
..+|+||||+|++|+.+|.+|++.+ .+|+|+|+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~~ 47 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYM-LKTLVIGET 47 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred CccCEEEECccHHHHHHHHHHHHCC-CcEEEEecc
Confidence 4699999999999999999999986 899999995
No 88
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.82 E-value=1e-05 Score=76.64 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|++|+.+|.+|++.+ .+|+|||+++.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G-~kV~VlEr~~~ 141 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMG-FNPIIVERGKE 141 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTT-CCCEEECSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CeEEEEEccCc
Confidence 4599999999999999999999987 89999999964
No 89
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.81 E-value=1.6e-05 Score=70.92 Aligned_cols=36 Identities=25% Similarity=0.226 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|++|+++|..|++.+ .+|+|||+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G-~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAG-VDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CCEEEEecCCC
Confidence 4689999999999999999999987 99999999865
No 90
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.81 E-value=1.5e-05 Score=74.11 Aligned_cols=38 Identities=32% Similarity=0.385 Sum_probs=34.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
++++|+||||+|++|+++|..|++.+ .+|+|||+.+..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G-~~v~vlE~~~~~ 47 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGG-VDVMVLEQLPQR 47 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESCSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEECCCCC
Confidence 36799999999999999999999987 999999997643
No 91
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.81 E-value=1.3e-05 Score=69.05 Aligned_cols=35 Identities=26% Similarity=0.460 Sum_probs=32.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.||+||||+|++|+.+|.+|++.+ .+|+|||+.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g-~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSG-LSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSS-CCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC-CCEEEEECCCC
Confidence 599999999999999999999986 89999999864
No 92
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.81 E-value=1.4e-05 Score=75.62 Aligned_cols=37 Identities=32% Similarity=0.453 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.+||+||||+|++|+++|..|++.+ ++|+|||+.+..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G-~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGG-VGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTT-CCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEcCCCCC
Confidence 4699999999999999999999987 899999998653
No 93
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.81 E-value=1.4e-05 Score=77.19 Aligned_cols=35 Identities=31% Similarity=0.437 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|.||+.+|..|++.+ .+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G-~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMG-QQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCC-CCEEEEeecc
Confidence 5799999999999999999999987 8999999874
No 94
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.81 E-value=1.6e-05 Score=69.61 Aligned_cols=36 Identities=22% Similarity=0.311 Sum_probs=33.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+.+|+||||+|++|+.+|..|++.+ .+|+|||+.+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~v~lie~~~~ 48 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNN-ISCRIIESMPQ 48 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CCEEEEecCCC
Confidence 4699999999999999999999986 89999999754
No 95
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.80 E-value=1e-05 Score=70.68 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhcCC-----CCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENP-----NWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~-----~~~VLlLEaG~ 93 (224)
|+||||+|.+|+.+|..|++.+ +.+|+|||++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 8999999999999999999984 48999999985
No 96
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.80 E-value=1.3e-05 Score=73.78 Aligned_cols=33 Identities=30% Similarity=0.507 Sum_probs=31.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
.+||+||||+|+||..+|.+|++.+ .+|+|||+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G-~~V~liEk 37 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLG-KKVAVADY 37 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC-CeEEEEEe
Confidence 5799999999999999999999987 89999997
No 97
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.80 E-value=1.5e-05 Score=69.55 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHhc---CCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSE---NPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae---~~~~~VLlLEaG~ 93 (224)
+|+||||+|.+|+++|..|++ .+ .+|+|+|+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G-~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGP-LYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CC-EEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCC-ceEEEEECCC
Confidence 699999999999999999999 76 8999999975
No 98
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.80 E-value=1.8e-05 Score=68.23 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|++|+.+|.+|++.+ .+|+|+|+.+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~~~~ 39 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRG-LSFRFVDPLPE 39 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCC-CCEEEEeCCCC
Confidence 4699999999999999999999986 89999999753
No 99
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.79 E-value=1.5e-05 Score=76.50 Aligned_cols=36 Identities=33% Similarity=0.338 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|.||+.+|..|++.+ .+|+|||+...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G-~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAG-FNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCC-CcEEEEeccCC
Confidence 5799999999999999999999987 89999999853
No 100
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.78 E-value=1.6e-05 Score=71.73 Aligned_cols=36 Identities=28% Similarity=0.459 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|.+|+++|.+|++.+ .+|+|||+...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g-~~v~v~E~~~~ 39 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAG-LSVAVIEARDR 39 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC-CcEEEEECCCC
Confidence 3689999999999999999999986 89999999754
No 101
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.78 E-value=1.6e-05 Score=76.75 Aligned_cols=36 Identities=25% Similarity=0.253 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|.+|+.+|..|++.+ .+|+|||++..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G-~~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKG-LSTIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTT-CCEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHCC-CcEEEEeccCC
Confidence 4699999999999999999999987 89999999764
No 102
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.78 E-value=1.6e-05 Score=67.95 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|++|+.+|.+|++.+ .+|+|||+.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~~~~ 41 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQ-ASVKIIESLPQ 41 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCC-CCEEEEEcCCC
Confidence 3599999999999999999999986 89999999763
No 103
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.78 E-value=1.7e-05 Score=71.87 Aligned_cols=34 Identities=35% Similarity=0.606 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNW--KVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG~~ 94 (224)
+|+||||+|.+|+++|.+|++.+ . +|+|||+...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G-~~~~V~vlEa~~~ 38 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAP-CPPKVVLVESSER 38 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSS-SCCEEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCC-CCCcEEEEeCCCC
Confidence 69999999999999999999987 7 9999999653
No 104
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.78 E-value=1.4e-05 Score=72.48 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=31.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
..+|+||||+|++|+++|..|++.+ .+|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G-~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHD-VDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTT-CEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC-CeEEEEcCCC
Confidence 3589999999999999999999997 9999999876
No 105
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.78 E-value=1.1e-05 Score=72.70 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCC-----CCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENP-----NWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~-----~~~VLlLEaG~~ 94 (224)
.+|+||||+|.+|+++|.+|++.+ +.+|+|||+...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~ 45 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPR 45 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCC
Confidence 589999999999999999999975 289999999753
No 106
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.77 E-value=1.7e-05 Score=72.57 Aligned_cols=35 Identities=40% Similarity=0.646 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|+||||+|.+|+.+|.+|++.+ .+|+|||+...
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g-~~v~v~E~~~~ 73 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAG-FKTLLLEARDR 73 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTT-CCEEEECSSSB
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC-CCEEEEeCCCC
Confidence 499999999999999999999987 89999999754
No 107
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.77 E-value=1.8e-05 Score=68.22 Aligned_cols=34 Identities=35% Similarity=0.651 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
..+|++|||+|++|+.+|.+|++.+ .+|+|||+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~v~lie~~ 40 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQ-LSTLILEKG 40 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcC-CcEEEEeCC
Confidence 4699999999999999999999986 899999997
No 108
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.77 E-value=1.9e-05 Score=72.07 Aligned_cols=35 Identities=40% Similarity=0.591 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++||+||||+|++|..+|.+|++.+ .+|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g-~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYG-QKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTT-CCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCC-CeEEEEcCCC
Confidence 4699999999999999999999976 8999999974
No 109
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.77 E-value=1.7e-05 Score=76.33 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|.||+.+|..|++.+ .+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G-~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMG-AKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTT-CCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC-CCEEEEEecc
Confidence 4699999999999999999999987 8999999974
No 110
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.76 E-value=2.3e-05 Score=70.10 Aligned_cols=37 Identities=22% Similarity=0.320 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+.+|+||||+|.+|+++|.+|++.+..+|+|+|+...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~ 41 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDH 41 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 4689999999999999999999975369999999654
No 111
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.76 E-value=2e-05 Score=72.15 Aligned_cols=37 Identities=27% Similarity=0.367 Sum_probs=32.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+.+|+||||+|.+|+++|.+|++.+ .+|+|||+...
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g-~~v~v~E~~~~ 47 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHG-LNVTVFEAEGK 47 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTS-CEEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEEeCCC
Confidence 35699999999999999999999987 89999999865
No 112
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.75 E-value=2.1e-05 Score=72.15 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
..||+||||+|++|+.+|.+|++.+ .+|+|||++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G-~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELG-ARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTT-CCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CeEEEEecCC
Confidence 4699999999999999999999987 8999999774
No 113
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.75 E-value=2e-05 Score=75.66 Aligned_cols=36 Identities=31% Similarity=0.479 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHh---c-CCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLS---E-NPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLa---e-~~~~~VLlLEaG~~ 94 (224)
.+||+||||+|.||+.+|.+|+ + .+ .+|+|||++..
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G-~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGG-LKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTT-CCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCC-CeEEEEeCcCC
Confidence 5799999999999999999999 5 66 89999999864
No 114
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.75 E-value=2.1e-05 Score=72.14 Aligned_cols=35 Identities=34% Similarity=0.586 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++||+||||+|++|..+|.+|++.+ .+|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g-~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFG-KRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCC-CcEEEEcCCC
Confidence 4699999999999999999999976 8999999974
No 115
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.75 E-value=2.1e-05 Score=73.38 Aligned_cols=36 Identities=28% Similarity=0.452 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhc---CCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSE---NPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae---~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|++|+++|..|++ .+ .+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G-~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQ-ANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSS-CEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCC-CEEEEECCCCC
Confidence 36899999999999999999999 76 89999999653
No 116
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.74 E-value=1.8e-05 Score=73.28 Aligned_cols=37 Identities=32% Similarity=0.423 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|.+|+++|.+|++.+..+|+|||+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~r 43 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCC
Confidence 3689999999999999999999985479999999754
No 117
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.74 E-value=1.8e-05 Score=72.39 Aligned_cols=35 Identities=29% Similarity=0.511 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|++|+.+|.+|++.+ .+|+|+|+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G-~~V~liE~~~ 38 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLG-FNTACVEKRG 38 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC-CeEEEEecCC
Confidence 4699999999999999999999986 8999999954
No 118
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.73 E-value=2e-05 Score=77.34 Aligned_cols=36 Identities=22% Similarity=0.546 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~~ 94 (224)
+++|+||||+|.+|+.+|.+|++.+ . +|+|||++..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G-~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRG-WNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT-CCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCC-CCcEEEEeCCCC
Confidence 4699999999999999999999987 6 8999999864
No 119
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.73 E-value=2.1e-05 Score=75.78 Aligned_cols=36 Identities=33% Similarity=0.420 Sum_probs=32.7
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
..+||+||||+|.||+.+|..|++.+ .+|+|||+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G-~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGG-LHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCC-CcEEEEEecc
Confidence 35799999999999999999999987 8999999874
No 120
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.72 E-value=2.2e-05 Score=73.17 Aligned_cols=34 Identities=35% Similarity=0.633 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
.+||+||||+|+||..+|.+|++.+ .+|+|+|+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G-~~V~liEk~ 64 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYG-KKVMVLDFV 64 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT-CCEEEECCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CeEEEEecc
Confidence 5799999999999999999999987 899999984
No 121
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.72 E-value=2.5e-05 Score=71.45 Aligned_cols=35 Identities=31% Similarity=0.557 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+||+||||+|+||..+|.+|++.+ .+|+|+|+.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g-~~V~lie~~~~ 36 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLG-MKTACVEKRGA 36 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCCC
Confidence 599999999999999999999986 89999999853
No 122
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.72 E-value=2.9e-05 Score=72.30 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=34.1
Q ss_pred cCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 56 LLMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 56 ~~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
....+|+||||+|++|..+|.+|++.+ .+|+|||++.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G-~~V~liE~~~ 76 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMG-GRQLIVDRWP 76 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTT-CCEEEEESSS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence 456799999999999999999999986 8999999987
No 123
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.72 E-value=1.8e-05 Score=76.46 Aligned_cols=37 Identities=27% Similarity=0.391 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-----CCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSEN-----PNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~-----~~~~VLlLEaG~~ 94 (224)
.+||+||||||.||+.+|.+|++. ++.+|+|||++..
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 469999999999999999999996 2389999999753
No 124
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.71 E-value=2.5e-05 Score=68.09 Aligned_cols=34 Identities=29% Similarity=0.446 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC-eEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~ 93 (224)
+||+||||+|++|+.+|.+|++.+ . +|+|||+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g-~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFG-ITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcC-CCcEEEEecCC
Confidence 599999999999999999999986 7 999999985
No 125
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.71 E-value=3.6e-05 Score=71.48 Aligned_cols=37 Identities=27% Similarity=0.265 Sum_probs=33.7
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
...+|+||||+|++|+.+|..|++.+ .+|+|||+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G-~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLG-ARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCC-CeEEEEEeccc
Confidence 35799999999999999999999987 89999999864
No 126
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.71 E-value=2.5e-05 Score=71.84 Aligned_cols=35 Identities=43% Similarity=0.678 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|++|..+|.+|++.+ .+|+|+|++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g-~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYG-AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTS-CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCC-CcEEEEeCCC
Confidence 4799999999999999999999986 8999999974
No 127
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.71 E-value=2.3e-05 Score=69.66 Aligned_cols=37 Identities=35% Similarity=0.534 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~ 94 (224)
.+||++|||+|++|+.+|..|++. ++.+|+|+|+++.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 568999999999999999999986 1389999999754
No 128
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.71 E-value=2.8e-05 Score=71.01 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|++|..+|.+|++.+ .+|+|||++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g-~~V~lie~~~ 37 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQG-AQVTLIERGT 37 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCC
Confidence 4699999999999999999999986 8999999983
No 129
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.70 E-value=2.6e-05 Score=71.04 Aligned_cols=34 Identities=35% Similarity=0.516 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+||+||||+|+||..+|.+|++.+ .+|+|+|+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLG-MKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCC-CeEEEEeCCC
Confidence 489999999999999999999986 8999999985
No 130
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=2.9e-05 Score=71.86 Aligned_cols=34 Identities=44% Similarity=0.671 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+||+||||+|+||..+|.+|++.+ .+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g-~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHN-AKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT-CCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCC-CcEEEEeCCC
Confidence 599999999999999999999986 8999999985
No 131
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.69 E-value=1.7e-05 Score=73.19 Aligned_cols=35 Identities=34% Similarity=0.546 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHHhc---CCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSE---NPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae---~~~~~VLlLEaG~~ 94 (224)
.+|+||||+|++|+++|..|++ .+ .+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G-~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDR-IDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGG-SEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCC-CEEEEEecCCC
Confidence 4799999999999999999999 86 89999999753
No 132
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.69 E-value=2.3e-05 Score=72.01 Aligned_cols=35 Identities=34% Similarity=0.540 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|++|..+|.+|++.+ .+|+|||+.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G-~~V~liE~~~ 39 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEG-LKVAIVERYK 39 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC-CeEEEEeCCC
Confidence 4699999999999999999999986 8999999954
No 133
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.69 E-value=2.7e-05 Score=66.36 Aligned_cols=32 Identities=28% Similarity=0.470 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeecC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAG 92 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG 92 (224)
||++|||+|++|+.+|..|++.+ . +|+|||+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g-~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGG-VKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT-CSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCC-CCcEEEEcCC
Confidence 89999999999999999999986 8 99999985
No 134
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.69 E-value=3e-05 Score=74.19 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=33.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhc-CCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSE-NPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae-~~~~~VLlLEaG~~ 94 (224)
.+++|+||||+|++|+++|..|++ .+ .+|+|||+.+.
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G-~~V~viEr~~~ 67 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPD-IRTCIVEQKEG 67 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTT-SCEEEECSSSS
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCC-CCEEEEeCCCC
Confidence 457999999999999999999999 87 99999999764
No 135
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.69 E-value=2.7e-05 Score=73.08 Aligned_cols=37 Identities=27% Similarity=0.459 Sum_probs=33.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|+||||+|++|+++|..|++.+ .+|+|||+.+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G-~~V~vlEr~~~~ 61 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQ-VGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CCEEEEeCCCCC
Confidence 4699999999999999999999987 999999998643
No 136
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.68 E-value=3e-05 Score=66.05 Aligned_cols=32 Identities=28% Similarity=0.456 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
+||+||||+|++|+.+|.+|++.+ .+|+|||.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g-~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKG-IRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTT-CCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC-CcEEEEeC
Confidence 489999999999999999999986 89999986
No 137
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.66 E-value=3.8e-05 Score=74.13 Aligned_cols=40 Identities=25% Similarity=0.388 Sum_probs=36.1
Q ss_pred cCCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCCC
Q psy7388 56 LLMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHET 96 (224)
Q Consensus 56 ~~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~~ 96 (224)
+..+|||||||+|..|+++|..|++.| +|||+||+.....
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g-~~vl~id~~~~~g 44 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSG-QRVLHVDSRSYYG 44 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSSSC
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCC-CEEEEEcCCCccc
Confidence 446899999999999999999999997 8999999988653
No 138
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.65 E-value=3.3e-05 Score=71.26 Aligned_cols=31 Identities=26% Similarity=0.301 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
|+||||+|.+|+.+|.+|++.+ .+|+|||++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G-~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAG-KKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCC-CCEEEEeCC
Confidence 8999999999999999999987 899999998
No 139
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.65 E-value=3.2e-05 Score=70.81 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|+||..+|.+|++.+ .+|+|||+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g-~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLG-FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CeEEEEeCCC
Confidence 4699999999999999999999986 8999999986
No 140
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.65 E-value=3.4e-05 Score=70.28 Aligned_cols=33 Identities=39% Similarity=0.540 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
+||+||||+|+||..+|.+|++.+ .+|+|+|+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g-~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLG-QKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC-CeEEEEECC
Confidence 699999999999999999999986 899999997
No 141
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.65 E-value=4.2e-05 Score=71.68 Aligned_cols=36 Identities=31% Similarity=0.436 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhc---CCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSE---NPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae---~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|++|+++|..|++ .+ .+|+|||+...
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G-~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGT-ADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTS-SEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCC-CcEEEEeCCCC
Confidence 46999999999999999999999 76 89999999753
No 142
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.64 E-value=2.7e-05 Score=66.57 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=31.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
..+|++|||+|++|+.+|.+|++.+ .+|+|||+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARAN-LQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTT-CCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC-CcEEEEccC
Confidence 3699999999999999999999986 899999964
No 143
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.64 E-value=3.6e-05 Score=72.01 Aligned_cols=36 Identities=36% Similarity=0.470 Sum_probs=33.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|++|+.+|.+|.+.+ .+|+|||+++.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G-~~v~iiE~~~~ 50 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELG-RSVHVIETAGD 50 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCC-CCEEEEeCCCC
Confidence 5799999999999999999999986 89999999753
No 144
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=3.3e-05 Score=70.48 Aligned_cols=35 Identities=31% Similarity=0.549 Sum_probs=32.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|++|..+|.+|++.+ .+|+|+|+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g-~~V~liE~~~ 39 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLG-FKTTCIEKRG 39 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHT-CCEEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCC
Confidence 4699999999999999999999986 8999999985
No 145
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.63 E-value=4.7e-05 Score=68.33 Aligned_cols=35 Identities=26% Similarity=0.565 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|++|||+|.+|+++|.+|++.+ .+|+|+|+...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g-~~v~v~E~~~~ 37 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKG-HQVHIIDQRDH 37 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT-CEEEEEESSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC-CcEEEEEecCC
Confidence 489999999999999999999986 89999999764
No 146
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.63 E-value=4.8e-05 Score=70.32 Aligned_cols=37 Identities=24% Similarity=0.313 Sum_probs=33.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|++|||+|.+|+++|.+|++.+..+|+|||+.+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~ 44 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDT 44 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCC
Confidence 4699999999999999999999987579999999864
No 147
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.62 E-value=3.4e-05 Score=68.46 Aligned_cols=35 Identities=31% Similarity=0.692 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
|+||||+|++|+.+|..|++. ++.+|+|||+.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 899999999999999999997 23999999997643
No 148
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.61 E-value=2.7e-05 Score=65.98 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=31.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEE-eecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLL-LEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLl-LEaG 92 (224)
+.+|++|||+|+||+.+|.+|++.+ .+|+| +|+.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~li~e~~ 37 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGG-LKNVVMFEKG 37 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHT-CSCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC-CCeEEEEeCC
Confidence 4699999999999999999999986 89999 9983
No 149
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.61 E-value=3.8e-05 Score=70.09 Aligned_cols=33 Identities=30% Similarity=0.521 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
+||+||||+|++|..+|.+|++.+ .+|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G-~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLG-LSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC-CeEEEEeCC
Confidence 599999999999999999999986 899999997
No 150
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.61 E-value=3e-05 Score=67.20 Aligned_cols=35 Identities=29% Similarity=0.328 Sum_probs=31.8
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
...+|+||||+|++|+.+|.+|++.+ .+|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g-~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQ-LAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTT-CCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCC-CeEEEEecC
Confidence 35799999999999999999999986 899999964
No 151
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.60 E-value=3.8e-05 Score=71.43 Aligned_cols=36 Identities=31% Similarity=0.474 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhc------------CCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSE------------NPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae------------~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|++|+++|..|++ .+ .+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G-~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPK-LNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCS-CEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCC-CeEEEEeCCCC
Confidence 46899999999999999999999 65 89999998643
No 152
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.60 E-value=3.3e-05 Score=71.29 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHhcC---CCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSEN---PNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~---~~~~VLlLEaG~ 93 (224)
+||+||||+|++|..+|.+|++. + .+|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G-~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPET-TQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTT-EEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCc-CEEEEEeCCC
Confidence 48999999999999999999997 5 8999999985
No 153
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.59 E-value=3.4e-05 Score=66.36 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=30.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
..+|+||||+|++|+.+|..|++.+ .+|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g-~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAE-LKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC-CeEEEEec
Confidence 3699999999999999999999986 89999998
No 154
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.59 E-value=5.9e-05 Score=68.50 Aligned_cols=36 Identities=28% Similarity=0.401 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC--eEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNW--KVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG~~ 94 (224)
..+|++|||+|++|+.+|..|++.+ . +|+|+|+...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G-~~~~V~v~E~~~~ 42 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEK-AFDQVTLFERRGS 42 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT-CCSEEEEECSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC-CCCCeEEEecCCC
Confidence 4689999999999999999999986 7 9999999753
No 155
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.59 E-value=4.2e-05 Score=70.71 Aligned_cols=32 Identities=25% Similarity=0.493 Sum_probs=30.1
Q ss_pred CcccEEEECCChHHHHHHHHHhc-CCCCeEEEee
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSE-NPNWKVLLLE 90 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae-~~~~~VLlLE 90 (224)
.+||+||||+|++|..+|.+|++ .+ .+|+|+|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G-~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHK-KRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHC-CCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcC-CEEEEEe
Confidence 36999999999999999999999 87 8999999
No 156
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.58 E-value=5.5e-05 Score=68.36 Aligned_cols=34 Identities=32% Similarity=0.451 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
..+|++|||+|.+|+++|.+|.+.+ .+|+|||+.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G-~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAG-HDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTS-CEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC-CcEEEEecc
Confidence 4689999999999999999999987 899999998
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.56 E-value=5.5e-05 Score=69.28 Aligned_cols=34 Identities=44% Similarity=0.636 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+||+||||+|+||..+|.+|++.+ .+|+|+|++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g-~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLG-LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC-CeEEEEeCCC
Confidence 699999999999999999999986 8999999985
No 158
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.55 E-value=6.8e-05 Score=65.81 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|||+|++|+++|..|++.+ ++|+|+|+-+.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G-~~v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHG-IKVTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CCEEEEecCCC
Confidence 5899999999999999999997 99999998764
No 159
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.55 E-value=4.7e-05 Score=72.52 Aligned_cols=37 Identities=27% Similarity=0.313 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCC-CCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENP-NWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG~~ 94 (224)
.+||+||||+|.+|+.+|..|++.+ +.+|+|||+...
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 3699999999999999999999974 379999999753
No 160
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.55 E-value=5.1e-05 Score=68.89 Aligned_cols=36 Identities=31% Similarity=0.471 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCC-CCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENP-NWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG~~ 94 (224)
.+|+||||+|.+|+.+|.+|++.+ +.+|+|||+...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGER 40 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 589999999999999999999974 379999999653
No 161
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.55 E-value=4.1e-05 Score=70.90 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=30.3
Q ss_pred CcccEEEECCChHHHHHHHHHhc-CCCCeEEEee
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSE-NPNWKVLLLE 90 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae-~~~~~VLlLE 90 (224)
.+||+||||+|+||..+|.+|++ .+ .+|+|+|
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G-~~V~liE 38 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYG-KRVAVVD 38 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHC-CCEEEEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcC-CeEEEEe
Confidence 46999999999999999999999 86 8999999
No 162
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.53 E-value=4.7e-05 Score=69.60 Aligned_cols=35 Identities=26% Similarity=0.497 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+||+||||+|+||..+|.+|++.+ .+|+|+|++.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g-~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLG-IPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHT-CCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC-CEEEEEccCC
Confidence 4699999999999999999999986 8999999953
No 163
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.52 E-value=5.9e-05 Score=69.01 Aligned_cols=36 Identities=31% Similarity=0.362 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|.+|+.+|.+|++.+ .+|+|||+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g-~~v~vlE~~~~ 67 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAG-HQVTVLEASER 67 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC-CeEEEEECCCC
Confidence 4689999999999999999999987 89999999754
No 164
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.51 E-value=7e-05 Score=68.32 Aligned_cols=36 Identities=44% Similarity=0.581 Sum_probs=31.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~~ 94 (224)
+.+|++|||+|.+|+.+|.+|++.+ . +|+|||++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g-~~~v~~~e~~~~ 39 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAG-ITDLLILEATDH 39 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTT-CCCEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC-CCceEEEeCCCC
Confidence 4689999999999999999999987 6 8999999864
No 165
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.48 E-value=5.5e-05 Score=68.58 Aligned_cols=37 Identities=32% Similarity=0.421 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCC-C---CeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENP-N---WKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~-~---~~VLlLEaG~~ 94 (224)
+.||+||||+|++|+.+|.+|++.+ . .+|+|||+.+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~ 69 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGD 69 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCC
Confidence 4699999999999999999999974 2 79999999874
No 166
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.47 E-value=7.7e-05 Score=71.83 Aligned_cols=36 Identities=33% Similarity=0.472 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhc-----CCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSE-----NPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae-----~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|++|+++|..|++ .+ ++|+|||+.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~G-i~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPD-LKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTT-CCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCC-CCEEEEeCCCC
Confidence 36999999999999999999999 76 99999998764
No 167
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.45 E-value=8.6e-05 Score=70.03 Aligned_cols=35 Identities=31% Similarity=0.505 Sum_probs=32.0
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
...||+||||+|+||..+|.+|++.+ .+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g-~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYG-AKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTT-CCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCC-CeEEEEecc
Confidence 35799999999999999999999987 899999974
No 168
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.45 E-value=9.2e-05 Score=69.73 Aligned_cols=35 Identities=34% Similarity=0.510 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|+||||+|++|+.+|.+|.+.+ .+|+|||+.+
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G-~~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQG-LTVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhCC-CCEEEEeCCC
Confidence 5799999999999999999999976 8999999965
No 169
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.44 E-value=9.9e-05 Score=69.45 Aligned_cols=35 Identities=34% Similarity=0.425 Sum_probs=32.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|+||||+|++|+.+|.+|.+.+ .+|+|||+++
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g-~~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAG-MKVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCC-CCEEEEeCCC
Confidence 4699999999999999999999976 8999999985
No 170
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.43 E-value=0.0001 Score=67.65 Aligned_cols=33 Identities=33% Similarity=0.218 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+|+||||+|.||+.+|..|++.+ .+|+|+|..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G-~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLG-VPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCC-CcEEEEeccC
Confidence 69999999999999999999987 8999999876
No 171
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.42 E-value=0.00011 Score=69.03 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHHh-cCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLS-ENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLa-e~~~~~VLlLEaG~ 93 (224)
.++|+||||+|++|+.+|.+|. +.+ .+|+|||+.+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G-~~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELG-LTTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CCEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCC-CCEEEEECCC
Confidence 4699999999999999999999 765 8999999965
No 172
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.42 E-value=0.0001 Score=69.49 Aligned_cols=36 Identities=31% Similarity=0.391 Sum_probs=33.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|+||||+|.+|+.+|..|++.+ .+|+|||+.+.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g-~~v~~~e~~~~ 160 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAG-AKVILLEKEPI 160 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSS-CCEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC-CcEEEEecCCC
Confidence 4689999999999999999999987 89999999864
No 173
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.40 E-value=0.00014 Score=64.59 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=31.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCC-CCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENP-NWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG~ 93 (224)
..||+||||+|+||..+|.+|++.+ +.+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3699999999999999999999976 35799999865
No 174
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.38 E-value=0.0001 Score=66.95 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~ 94 (224)
+|+||||+|++|..+|.+|++. ++.+|+|||+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 6899999999999999999986 2489999999874
No 175
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.35 E-value=0.00016 Score=65.61 Aligned_cols=37 Identities=24% Similarity=0.229 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-CeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPN-WKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~-~~VLlLEaG~~ 94 (224)
..+|+||||+|++|+.+|.+|++.+. .+|+|||+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 36899999999999999999999862 28999998864
No 176
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.34 E-value=0.00018 Score=64.52 Aligned_cols=38 Identities=26% Similarity=0.332 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-CeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPN-WKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~-~~VLlLEaG~~~ 95 (224)
+.+|+||||+|+||+.+|.+|++.+. .+|+|||+.+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 56999999999999999999999862 249999998753
No 177
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.32 E-value=0.00015 Score=67.53 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=31.3
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
...||++|||+|+||+.+|.+|++.+ .+|+|+|.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G-~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKG-IRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCC-CeEEEEEC
Confidence 35799999999999999999999986 89999986
No 178
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.32 E-value=0.00014 Score=70.11 Aligned_cols=37 Identities=32% Similarity=0.457 Sum_probs=33.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
...+|+||||+|+||+.+|.+|++.+ .+|+|+|++..
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G-~~V~liE~~~~ 425 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRG-YDVVLAEAGRD 425 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCC-CeEEEEecCCC
Confidence 35689999999999999999999986 89999999753
No 179
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.31 E-value=0.00027 Score=69.44 Aligned_cols=37 Identities=32% Similarity=0.431 Sum_probs=33.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
...+|+||||+|.+|+.+|..|++.+ .+|+|||++..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g-~~v~v~E~~~~ 370 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFG-IKVTVLEAKDR 370 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHT-CEEEEECSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEecccc
Confidence 35699999999999999999999987 89999999754
No 180
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.26 E-value=0.00021 Score=63.60 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.-|+||||+|+||..+|.+|++.+ +|+|+|+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g--~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY--EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS--EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC--CEEEEECCCC
Confidence 479999999999999999999876 9999999875
No 181
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.26 E-value=0.00019 Score=65.99 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=33.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|++|||+|+||+.+|.+|++.+ .+|+|+|+.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G-~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKG-YEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHT-CCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeccCC
Confidence 4689999999999999999999987 89999999864
No 182
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.25 E-value=0.00022 Score=65.48 Aligned_cols=34 Identities=12% Similarity=0.257 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhc---CCCCe---EEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSE---NPNWK---VLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae---~~~~~---VLlLEaG~~ 94 (224)
+|++|||+|++|+.+|.+|++ .+ .+ |+|+|+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G-~~~~~V~v~E~~~~ 42 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKG-AEIPELVCFEKQAD 42 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTT-CCCCEEEEECSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcC-CCCCcEEEEEcCCC
Confidence 699999999999999999999 76 78 999999754
No 183
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.23 E-value=0.00015 Score=66.98 Aligned_cols=36 Identities=33% Similarity=0.467 Sum_probs=32.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
..+|+||||+|++|+.+|.+|++. .+|+|||+++..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~--~~V~vie~~~~~ 142 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY--LTVALIEERGWL 142 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT--CCEEEECTTSSS
T ss_pred ccCCEEEECccHHHHHHHHHHHhc--CCEEEEeCCCCC
Confidence 458999999999999999999997 899999998753
No 184
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.21 E-value=0.00023 Score=65.75 Aligned_cols=39 Identities=23% Similarity=0.443 Sum_probs=33.2
Q ss_pred CCcccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
...+|+||||+|+||+.+|..|.+. .+.+|+|||+.+..
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 4579999999999999999998874 34899999998653
No 185
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.20 E-value=0.00023 Score=64.54 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~ 94 (224)
.|+||||+|+||..+|.+|++. ++.+|+|||+.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCc
Confidence 4899999999999999999986 2489999999875
No 186
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.18 E-value=0.00017 Score=66.48 Aligned_cols=36 Identities=17% Similarity=0.346 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCC--CCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENP--NWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~--~~~VLlLEaG~~ 94 (224)
++|+||||+|+||..+|.+|++.+ +.+|+|||+.+.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 599999999999999999999863 489999999874
No 187
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.17 E-value=0.00023 Score=64.72 Aligned_cols=36 Identities=17% Similarity=0.305 Sum_probs=32.0
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
.|+||||+|+||+.+|.+|++. ++.+|+|||+++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6999999999999999999985 34899999998753
No 188
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.16 E-value=0.00027 Score=64.13 Aligned_cols=37 Identities=32% Similarity=0.620 Sum_probs=32.6
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
.+|+||||+|++|+.+|.+|++. ++.+|+|+|+.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 48999999999999999999986 24899999998753
No 189
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.13 E-value=0.00028 Score=64.81 Aligned_cols=37 Identities=30% Similarity=0.515 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
.+|+||||+|+||..+|.+|++. .+.+|+|||+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 37999999999999999999985 34899999998753
No 190
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.13 E-value=0.00041 Score=66.50 Aligned_cols=36 Identities=28% Similarity=0.375 Sum_probs=32.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|+||||+|+||..+|..|++.+ .+|+|+|+.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g-~~V~lie~~~~ 407 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARG-HQVTLFDAHSE 407 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT-CEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC-CeEEEEeCCCC
Confidence 4589999999999999999999986 89999999754
No 191
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.09 E-value=0.00028 Score=64.45 Aligned_cols=37 Identities=19% Similarity=0.293 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
..|+||||+|++|+.+|.+|++. ++.+|+|||+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 46999999999999999999986 24899999998763
No 192
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.09 E-value=0.00035 Score=62.38 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHhc---CCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSE---NPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae---~~~~~VLlLEaG~~ 94 (224)
.|+||||+|++|+.+|.+|++ .+ .+|+|||+.+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g-~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSK-ADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGG-SEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCC-CeEEEEeCCCC
Confidence 379999999999999999998 65 89999999874
No 193
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.08 E-value=0.00043 Score=66.45 Aligned_cols=37 Identities=30% Similarity=0.361 Sum_probs=33.4
Q ss_pred CCcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 57 ~~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
...+|++|||+|++|+.+|.+|++.+ .+|+|+|+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g-~~v~~~e~~~~ 141 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFG-MDVTLLEARDR 141 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCC-CeEEEEecCCC
Confidence 35689999999999999999999987 89999999754
No 194
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.07 E-value=0.00044 Score=62.35 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHhc--CCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSE--NPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae--~~~~~VLlLEaG~~~ 95 (224)
.|+||||+|++|+.+|.+|++ .+ .+|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g-~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPD-LKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTT-CEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCC-CeEEEECCCCCC
Confidence 689999999999999999999 54 899999998753
No 195
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.06 E-value=0.00042 Score=62.27 Aligned_cols=38 Identities=13% Similarity=0.194 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-CeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPN-WKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~-~~VLlLEaG~~~ 95 (224)
..+|+||||+|++|..+|.+|++.+. .+|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46999999999999999999999762 369999998753
No 196
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.06 E-value=0.00047 Score=66.90 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|++|||+|+||+.+|..|++.+ .+|+|+|+...
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G-~~Vtlie~~~~ 423 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESG-YTVHLTDTAEK 423 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCCC
Confidence 4589999999999999999999987 89999999754
No 197
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.03 E-value=0.00042 Score=69.43 Aligned_cols=36 Identities=33% Similarity=0.505 Sum_probs=33.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..||+||||+|+||..+|.+|++.+ .+|+|||+.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G-~~V~lie~~~~ 162 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSG-ARVMLLDERAE 162 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTT-CCEEEECSSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCC-CcEEEEeCCCC
Confidence 4699999999999999999999987 89999999864
No 198
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.98 E-value=0.00069 Score=60.56 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCC-CeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPN-WKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~-~~VLlLEaG~~~ 95 (224)
.|+||||+|+||+.+|.+|.+.+. .+|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 489999999999999999999862 289999998753
No 199
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.97 E-value=0.0005 Score=64.55 Aligned_cols=38 Identities=29% Similarity=0.399 Sum_probs=33.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
...|+||||+|+||+.+|.+|.+. ++.+|+|+|+.+..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 458999999999999999999986 24899999999863
No 200
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.93 E-value=0.00056 Score=62.82 Aligned_cols=35 Identities=26% Similarity=0.281 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHhc-C------CCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSE-N------PNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae-~------~~~~VLlLEaG~~ 94 (224)
.+|++|||+|+||+.+|.+|.+ . + .+|+|+|+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g-~~V~lie~~~~ 44 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLD-MAVDMLEMLPT 44 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCC-EEEEEEESSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCC-CeEEEEecCCC
Confidence 5899999999999999999998 5 4 89999999854
No 201
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.87 E-value=0.00064 Score=61.48 Aligned_cols=36 Identities=22% Similarity=0.357 Sum_probs=32.0
Q ss_pred cccEEEECCChHHHHHHHHHhc---CCCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSE---NPNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae---~~~~~VLlLEaG~~~ 95 (224)
..|+||||+|++|+.+|.+|++ .+ .+|+|||+.+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g-~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSG-HEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGG-SEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCc-CEEEEEeCCCCC
Confidence 3699999999999999999998 54 899999998753
No 202
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.80 E-value=0.001 Score=65.99 Aligned_cols=36 Identities=31% Similarity=0.390 Sum_probs=32.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..+|++|||+|.+|+.+|.+|++.+ .+|+|+|+...
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g-~~v~v~E~~~~ 312 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFG-MDVTLLEARDR 312 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CcEEEEEecCc
Confidence 4689999999999999999999987 89999998754
No 203
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.72 E-value=0.00097 Score=62.00 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCC-CCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENP-NWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG~~~ 95 (224)
.|++|||+|+||+.+|.+|.+.+ +.+|+|+|+.+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 37999999999999999999862 4899999999764
No 204
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.72 E-value=0.0011 Score=66.66 Aligned_cols=35 Identities=17% Similarity=0.276 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCC-eEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~ 93 (224)
..+|++|||||+||..+|.+|++.+ . +|+|+|+..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G-~~~Vtv~E~~~ 221 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLG-YSDITIFEKQE 221 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC-CCcEEEEeCCC
Confidence 4689999999999999999999987 6 799999975
No 205
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.71 E-value=0.0011 Score=60.87 Aligned_cols=37 Identities=27% Similarity=0.222 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCC-CCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENP-NWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG~~ 94 (224)
..+|++|||+|++|..+|.+|.+.+ +.+|+|+|+.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~ 42 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 42 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 3589999999999999999999863 489999999864
No 206
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.70 E-value=0.0015 Score=58.56 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCC-CeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPN-WKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~-~~VLlLEaG~~~ 95 (224)
.|+||||+|+||+.+|.+|.+.+. .+|+|+|+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 489999999999999999999862 349999998754
No 207
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.58 E-value=0.0021 Score=56.95 Aligned_cols=33 Identities=33% Similarity=0.601 Sum_probs=28.8
Q ss_pred EEEECCChHHHHHHHHHhcC-CCCeEEEeecCCC
Q psy7388 62 FIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~ 94 (224)
+||||+|+||..+|.+|.+. ++.+|+|||..+.
T Consensus 5 VvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 5 VVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred EEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 89999999999999999874 3579999998764
No 208
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.38 E-value=0.0023 Score=58.09 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=29.5
Q ss_pred EEEECCChHHHHHHHHHhcCC-CCeEEEeecCCCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENP-NWKVLLLEAGGHE 95 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG~~~ 95 (224)
+||||+|+||..+|.+|++.+ +.+|+|+|+++..
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 799999999999999999854 4689999998753
No 209
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.15 E-value=0.005 Score=56.97 Aligned_cols=37 Identities=27% Similarity=0.284 Sum_probs=30.4
Q ss_pred CcccEEEECCChHHHHHHHHHhcC-------------CCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSEN-------------PNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~-------------~~~~VLlLEaG~~ 94 (224)
+-||+||||+|++|+.+|..|.|. +..+++.+|+-+.
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~ 87 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQ 87 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSS
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCC
Confidence 459999999999999999999763 3457888998653
No 210
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.10 E-value=0.0065 Score=54.32 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
+..-++|||+|+||..+|.+|.. .+.+|+|+|+.+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~-~~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALG-KCDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTT-TCSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhC-CCCEEEEEECCCCC
Confidence 46789999999999999999944 45899999998764
No 211
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.04 E-value=0.0059 Score=55.12 Aligned_cols=34 Identities=29% Similarity=0.514 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~ 94 (224)
.+||||+|+||..+|.+|.+. ++.+|+|||+.+.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 489999999999999999873 4689999998764
No 212
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.01 E-value=0.0033 Score=61.28 Aligned_cols=36 Identities=28% Similarity=0.412 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC-------CeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPN-------WKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~-------~~VLlLEaG~ 93 (224)
...+++|||+|.+|+.+|.+|++.+. .+|.|+|+..
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 35899999999999999999998642 7999999987
No 213
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.83 E-value=0.0065 Score=56.39 Aligned_cols=36 Identities=8% Similarity=0.241 Sum_probs=31.3
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+..-+||||+|+||..+|.+|...+ .+|+|||.-+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~-~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKK-YNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTT-CEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCC-CcEEEECCCCC
Confidence 3467999999999999999998865 89999998753
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.39 E-value=0.04 Score=49.65 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=32.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
...+++|||+|..|+-+|..|++.+ .+|.|+|+++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAG-KKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC-CeEEEEecCcc
Confidence 4579999999999999999999987 89999999875
No 215
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.17 E-value=0.052 Score=41.13 Aligned_cols=34 Identities=18% Similarity=0.395 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
=.++|||.|.-|..+|.+|.+.+ .+|.++|.-+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g-~~v~vid~~~~ 41 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD-IPLVVIETSRT 41 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEEESCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC-CCEEEEECCHH
Confidence 46899999999999999999987 89999998653
No 216
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.14 E-value=0.054 Score=40.69 Aligned_cols=32 Identities=28% Similarity=0.466 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|+|+|.-|..+|.+|.+.+ .+|.++|.-+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g-~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAG-KKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEECCH
Confidence 5899999999999999999987 8999999754
No 217
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.87 E-value=0.071 Score=39.35 Aligned_cols=32 Identities=28% Similarity=0.473 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|||+|..|..+|.+|.+.+ .+|.++++-+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g-~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKG-HDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCC-CeEEEEECCH
Confidence 5899999999999999999986 8999998753
No 218
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=93.69 E-value=0.073 Score=45.02 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g-~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFA-DKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTC-SEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhcC-CEEEEEeccccc
Confidence 6899999999999999999987 899999998754
No 219
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.56 E-value=0.078 Score=40.57 Aligned_cols=31 Identities=19% Similarity=0.176 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
-++|+|+|..|..+|.+|.+.+ .+|.++|.-
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g-~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRG-QNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCC-CCEEEEECC
Confidence 5899999999999999999986 899999985
No 220
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.54 E-value=0.083 Score=40.58 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.-.++|+|+|.-|..+|..|.+.+ .+|.++++-+.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG-HSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEECCHH
Confidence 456899999999999999999987 79999987643
No 221
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.00 E-value=0.098 Score=47.16 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFG-TKVTILEGAGEI 205 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCCcc
Confidence 57999999999999999999987 899999998753
No 222
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=93.00 E-value=0.076 Score=47.28 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=31.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+.+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g-~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSG-TPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHT-CCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CeEEEEEcCCcc
Confidence 47999999999999999999987 899999999864
No 223
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=92.97 E-value=0.098 Score=47.15 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g-~~V~lv~~~~~~ 202 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLG-AEVIVLEYMDRI 202 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CEEEEEecCCcc
Confidence 36899999999999999999986 899999998753
No 224
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=92.92 E-value=0.097 Score=47.50 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLG-AEVTLIEYMPEI 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CeEEEEEcCCcc
Confidence 46999999999999999999987 899999998753
No 225
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.78 E-value=0.082 Score=47.91 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLG-AQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCC-CeEEEEEcCCcc
Confidence 36899999999999999999986 899999999754
No 226
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=92.74 E-value=0.12 Score=45.52 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.-+++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 180 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGG-YQLDVVAPCEQV 180 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CeEEEEecCcch
Confidence 457899999999999999999987 899999998753
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.56 E-value=0.1 Score=46.01 Aligned_cols=35 Identities=31% Similarity=0.484 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAG-YHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTT-CEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCCee
Confidence 47899999999999999999987 899999999753
No 228
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=92.55 E-value=0.14 Score=43.00 Aligned_cols=35 Identities=31% Similarity=0.328 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G-~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYG-SKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTS-SEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhC-Ceeeeecccccc
Confidence 46899999999999999999987 899999988653
No 229
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.54 E-value=0.15 Score=36.40 Aligned_cols=34 Identities=26% Similarity=0.506 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.++|+|+|..|..+|.+|.+.+..+|.++++.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3589999999999999999998757899998754
No 230
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=92.15 E-value=0.14 Score=46.27 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 218 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLG-SKVTVVEFQPQI 218 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcC-CEEEEEEeCCcc
Confidence 36899999999999999999987 899999999753
No 231
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=91.96 E-value=0.16 Score=45.89 Aligned_cols=34 Identities=24% Similarity=0.162 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++.
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~ 201 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLG-AKTHLFEMFDA 201 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcC-CEEEEEEeCCc
Confidence 36899999999999999999987 89999999875
No 232
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.91 E-value=0.15 Score=37.65 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|+|+|..|..+|.+|.+.+ .+|.++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g-~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMG-HEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 4899999999999999999987 7899998753
No 233
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=91.73 E-value=0.16 Score=43.59 Aligned_cols=33 Identities=24% Similarity=0.432 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|||+|..|+-+|..|++.+ .+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g-~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNG-SDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhcC-CeEEEEecCCC
Confidence 6999999999999999999987 79999999875
No 234
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=91.57 E-value=0.2 Score=44.64 Aligned_cols=36 Identities=25% Similarity=0.328 Sum_probs=32.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAG-VHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CEEEEEEeCCcc
Confidence 357999999999999999999987 899999998753
No 235
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=91.35 E-value=0.13 Score=46.95 Aligned_cols=35 Identities=31% Similarity=0.461 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.-+++|||+|..|+-+|..|++.+ .+|.++|+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~ 220 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELG-KKVRMIERNDH 220 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTT-CEEEEECCGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcC-CeEEEEEeCCc
Confidence 467999999999999999999987 89999999865
No 236
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.29 E-value=0.17 Score=39.68 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~ 93 (224)
-.++|||.|..|..+|.+|.+. + .+|.++|.-+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG-KISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC-SCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccC-CeEEEEECCH
Confidence 3599999999999999999987 7 7999998764
No 237
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=91.26 E-value=0.21 Score=45.53 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g-~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKG-KEVVLIDVVDTC 229 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHCC-CeEEEEEcccch
Confidence 46899999999999999999987 899999998753
No 238
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.10 E-value=0.18 Score=40.85 Aligned_cols=31 Identities=16% Similarity=0.443 Sum_probs=28.3
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|||+|.-|..+|.+|.+.+ .+|.++|.-+
T Consensus 3 iiIiG~G~~G~~la~~L~~~g-~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRK-YGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTT-CCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCC-CeEEEEECCH
Confidence 799999999999999999986 8999999754
No 239
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=90.93 E-value=0.27 Score=41.19 Aligned_cols=35 Identities=26% Similarity=0.210 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++++..
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANIC-KKVYLIHRRDGF 178 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTS-SEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcC-CEEEEEeeCCcc
Confidence 46899999999999999999986 899999998753
No 240
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=90.76 E-value=0.25 Score=44.84 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|||+|..|+-+|..|++.+ .+|.|+|+++.
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G-~~Vtlv~~~~~ 200 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFG-SEVTVVALEDR 200 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcC-CEEEEEEcCCc
Confidence 6899999999999999999987 89999999865
No 241
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=90.70 E-value=0.27 Score=41.17 Aligned_cols=35 Identities=31% Similarity=0.304 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+.+..
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIV-EHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTB-SEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhC-CEEEEEEeCccc
Confidence 36899999999999999999986 899999998754
No 242
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=90.68 E-value=0.25 Score=44.66 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 180 ~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 180 KMVVIGAGVIGVELGSVWQRLG-ADVTAVEFLGHV 213 (474)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcC-CEEEEEeccCcc
Confidence 6899999999999999999987 899999998753
No 243
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.67 E-value=0.25 Score=44.33 Aligned_cols=34 Identities=26% Similarity=0.355 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCe-EEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWK-VLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~-VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+ |.|+++++.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~-~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVA-KHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTS-CSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHHHh-CCcEEEEeCCCC
Confidence 46999999999999999999987 56 999998863
No 244
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=90.54 E-value=0.27 Score=44.39 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYG-VDVTIVEFLPRA 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcC-CeEEEEEcCCcc
Confidence 36899999999999999999987 899999999753
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=90.31 E-value=0.29 Score=43.92 Aligned_cols=34 Identities=21% Similarity=0.433 Sum_probs=31.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQG-KNVTMIVRGERV 183 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSST
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CeEEEEEcCCcc
Confidence 7999999999999999999987 899999999753
No 246
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.29 E-value=0.29 Score=44.79 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++.
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g-~~Vtlv~~~~~ 210 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLG-IDSYIFARGNR 210 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTT-CEEEEECSSSS
T ss_pred CeEEEECChHHHHHHHHHHHHcC-CeEEEEecCCc
Confidence 36899999999999999999987 89999999875
No 247
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=90.05 E-value=0.34 Score=40.95 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+.+..
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g-~~V~lv~~~~~~ 194 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYG-SKVYIIHRRDAF 194 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-SEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHhcC-CeEEEEecCCcC
Confidence 46899999999999999999986 899999998753
No 248
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=90.00 E-value=0.31 Score=44.27 Aligned_cols=34 Identities=24% Similarity=0.240 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g-~~Vtlv~~~~~ 219 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLG-SETHLVIRGET 219 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CceEEEEeCCc
Confidence 36899999999999999999987 89999999975
No 249
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=89.95 E-value=0.35 Score=43.45 Aligned_cols=35 Identities=20% Similarity=0.373 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQN-YNVNLIDGHERV 184 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTT-CEEEEEESSSST
T ss_pred CeEEEECcCHHHHHHHHHHHhcC-CEEEEEEcCCch
Confidence 46899999999999999999986 899999998753
No 250
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=89.95 E-value=0.31 Score=41.21 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++++..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g-~~V~~v~~~~~~ 187 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTA-RRITLIHRRPQF 187 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTS-SEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhC-CEEEEEEcCCcc
Confidence 36899999999999999999986 799999998753
No 251
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=89.88 E-value=0.33 Score=43.57 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G-~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKAN-MHVTLLDTAARV 184 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CEEEEEEeCCcc
Confidence 46899999999999999999987 899999998753
No 252
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=89.87 E-value=0.37 Score=41.10 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++++..
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g-~~V~l~~~~~~~ 190 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFA-RSVTLVHRRDEF 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTC-SEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhC-CeEEEEEcCCcC
Confidence 46899999999999999999986 899999998753
No 253
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.87 E-value=0.32 Score=41.91 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||+|.-|+.+|.+|++++ .+|.++.+.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTG-HCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTT-CEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CeEEEEeCCh
Confidence 4789999999999999999987 7999998875
No 254
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=89.82 E-value=0.32 Score=44.51 Aligned_cols=35 Identities=23% Similarity=0.202 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g-~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLG-VIVKVFGRSGSV 209 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTT-CEEEEECCTTCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CeEEEEEECCcc
Confidence 36899999999999999999987 899999999853
No 255
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=89.76 E-value=0.32 Score=45.37 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~-~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETA-KELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTB-SEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhC-CEEEEEEcCCC
Confidence 35899999999999999999986 79999999985
No 256
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=89.68 E-value=0.26 Score=44.77 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G-~~Vtlv~~~~~~ 220 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLG-SRLDVVEMMDGL 220 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CeEEEEEECCcc
Confidence 36899999999999999999987 899999998753
No 257
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=89.58 E-value=0.36 Score=42.88 Aligned_cols=36 Identities=33% Similarity=0.453 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.-.++|||+|..|+-+|..|.+.+ .+|.++|+.+..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g-~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLG-LSVTILEAGDEL 178 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC-CeEEEEecCCcc
Confidence 357999999999999999999987 899999999764
No 258
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=89.52 E-value=0.38 Score=44.86 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~-~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEV-EHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTC-SEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhC-CEEEEEECCCC
Confidence 36999999999999999999986 89999999986
No 259
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.48 E-value=0.31 Score=44.29 Aligned_cols=34 Identities=12% Similarity=0.065 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++.+.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g-~~V~li~~~~~ 231 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYG-AKKLISCYRTA 231 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTT-CSEEEEECSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhC-CeEEEEEECCC
Confidence 35899999999999999999987 79999998754
No 260
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=89.41 E-value=0.42 Score=40.07 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++.+..
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 180 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIA-SEVHLIHRRDGF 180 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTS-SEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcC-CeEEEEEeCCcc
Confidence 46899999999999999999986 899999998753
No 261
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.32 E-value=0.23 Score=44.82 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.|+|+++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtli~~~~~~ 212 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIG-SEVTVVEFASEI 212 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHT-CEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCCcc
Confidence 36899999999999999999986 899999999753
No 262
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.28 E-value=0.32 Score=41.75 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||+|.-|+.+|.+|++++ .+|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g-~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSG-EDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTS-CCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCC-CeEEEEEcCc
Confidence 4789999999999999999987 7999998865
No 263
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=89.21 E-value=0.39 Score=43.28 Aligned_cols=35 Identities=17% Similarity=0.104 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLG-SKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcC-CEEEEEEECCcc
Confidence 35899999999999999999987 899999998753
No 264
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=89.21 E-value=0.44 Score=40.24 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++++..
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 187 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFA-DEVTVIHRRDTL 187 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTC-SEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcC-CEEEEEeCCCcC
Confidence 36899999999999999999986 899999998653
No 265
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=89.12 E-value=0.45 Score=39.96 Aligned_cols=35 Identities=29% Similarity=0.350 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++++..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g-~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYG-SKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTS-SEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcC-CEEEEEEcCCcc
Confidence 46899999999999999999986 899999998754
No 266
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=89.10 E-value=0.33 Score=43.73 Aligned_cols=34 Identities=24% Similarity=0.268 Sum_probs=31.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.|+|++...
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g-~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERG-LHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHhcC-Ccceeeeeeccc
Confidence 6999999999999999999987 899999999753
No 267
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=89.07 E-value=0.41 Score=43.21 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 209 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLG-AEVTVVEFAPRC 209 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CEEEEEecCCcc
Confidence 36899999999999999999987 899999999753
No 268
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.03 E-value=0.46 Score=39.50 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=28.4
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+.|||+|.-|..+|.+|++.+ .+|.++++.+.
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r~~~ 34 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQG-HEVQGWLRVPQ 34 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred EEEECcCHHHHHHHHHHHhCC-CCEEEEEcCcc
Confidence 689999999999999999987 69999987653
No 269
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=88.44 E-value=0.46 Score=40.81 Aligned_cols=34 Identities=26% Similarity=0.331 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.++++++..
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~g-~~V~lv~~~~~~ 198 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKNA-ASVTLVHRGHEF 198 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTTS-SEEEEECSSSSC
T ss_pred cEEEECCCHHHHHHHHHHHhcC-CEEEEEEcCCCC
Confidence 6899999999999999999986 899999998753
No 270
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.36 E-value=0.34 Score=44.41 Aligned_cols=32 Identities=22% Similarity=0.534 Sum_probs=29.2
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+||+|+|--|..+|..|++.+ ..|.|||.-+.
T Consensus 6 iiI~G~G~vG~~la~~L~~~~-~~v~vId~d~~ 37 (461)
T 4g65_A 6 IIILGAGQVGGTLAENLVGEN-NDITIVDKDGD 37 (461)
T ss_dssp EEEECCSHHHHHHHHHTCSTT-EEEEEEESCHH
T ss_pred EEEECCCHHHHHHHHHHHHCC-CCEEEEECCHH
Confidence 899999999999999999886 89999998753
No 271
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=88.31 E-value=0.49 Score=42.76 Aligned_cols=35 Identities=17% Similarity=0.265 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMG-VQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CEEEEEEeCCcC
Confidence 35899999999999999999987 899999998753
No 272
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=88.16 E-value=0.52 Score=39.66 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++++..
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g-~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYV-KNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTB-SEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhC-CcEEEEEcCCcc
Confidence 36899999999999999999986 899999988653
No 273
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=88.16 E-value=0.25 Score=45.58 Aligned_cols=36 Identities=31% Similarity=0.424 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHhcC-------------CCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN-------------PNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~-------------~~~~VLlLEaG~~~ 95 (224)
-.++|||+|+.|+-+|..|++. .+.+|.|+|+++..
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 3599999999999999998762 12689999999864
No 274
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=88.14 E-value=0.52 Score=43.41 Aligned_cols=34 Identities=32% Similarity=0.333 Sum_probs=31.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLG-IKTTLLELADQV 186 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcC-CcEEEEEcCCcc
Confidence 7999999999999999999987 899999999753
No 275
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.02 E-value=0.46 Score=41.68 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+-|||+|.-|+-+|..++.+| ++|.|+|.-+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G-~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGG-FRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCC-CeEEEEECCH
Confidence 4789999999999999999997 9999998754
No 276
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=87.99 E-value=0.41 Score=43.52 Aligned_cols=34 Identities=29% Similarity=0.289 Sum_probs=30.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 233 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARLG-AKVTVVEFLDTI 233 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT-CEEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHcC-CEEEEEeccccc
Confidence 5799999999999999999987 799999999754
No 277
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=87.98 E-value=0.57 Score=41.47 Aligned_cols=36 Identities=33% Similarity=0.329 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.-.++|||+|..|+-+|..|.+.+ .+|.++|+++..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g-~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFG-VNVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcC-CeEEEEecCCch
Confidence 346899999999999999999987 899999999754
No 278
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=87.97 E-value=0.53 Score=42.57 Aligned_cols=34 Identities=24% Similarity=0.140 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~ 221 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALG-SKTSLMIRHDK 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcC-CeEEEEEeCCc
Confidence 36899999999999999999987 89999999875
No 279
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.95 E-value=0.38 Score=44.91 Aligned_cols=34 Identities=18% Similarity=0.284 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|.-+|..|++.+ .+|.|+++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~-~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQA-EQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHB-SEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhC-CEEEEEECCCC
Confidence 35899999999999999999986 79999999985
No 280
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=87.76 E-value=0.48 Score=41.10 Aligned_cols=31 Identities=26% Similarity=0.444 Sum_probs=28.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
-+.|||+|.-|+.+|.+|++++ .+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g-~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAG-EAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTT-CCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCC-CEEEEEECh
Confidence 4789999999999999999987 799999875
No 281
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=87.68 E-value=0.58 Score=41.31 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|.+.+ .+|.++|+.+..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKG-LEVDVVELAPRV 177 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCCcc
Confidence 46899999999999999999987 899999998754
No 282
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=87.56 E-value=0.39 Score=42.97 Aligned_cols=37 Identities=14% Similarity=0.288 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
.-.++|||+|..|+-+|..|++. +..+|.++++.+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45799999999999999999987 34899999999753
No 283
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.49 E-value=0.37 Score=40.98 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||+|.-|+.+|.+|++++ .+|.++.+..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g-~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSL-PHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHC-TTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEEecc
Confidence 4789999999999999999987 6899988874
No 284
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.38 E-value=0.58 Score=39.32 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
-+.|||+|..|..+|.+|++.+ .+|.++++-
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~r~ 35 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGG-NDVTLIDQW 35 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSC
T ss_pred eEEEECcCHHHHHHHHHHHhCC-CcEEEEECC
Confidence 4789999999999999999987 799999874
No 285
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.37 E-value=0.71 Score=37.32 Aligned_cols=33 Identities=12% Similarity=0.308 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.+.|||+|..|..+|.+|++.+ .+|.++++.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g-~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAG-HEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCH
Confidence 45899999999999999999987 7999998765
No 286
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.35 E-value=0.58 Score=39.84 Aligned_cols=32 Identities=25% Similarity=0.421 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+|.-|..+|..|++.+ .+|.++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G-~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATG-HTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCC-CeEEEEECCH
Confidence 3889999999999999999987 7999998754
No 287
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.31 E-value=0.54 Score=42.51 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.+||||.|..|..+|..|.+.+ ..|++||.-+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g-~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG-VKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CCEEEEECCHH
Confidence 35999999999999999999987 89999998653
No 288
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=87.15 E-value=0.56 Score=43.79 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
.++|||+|..|+-+|..|++.+ .+|.++|++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLG-GDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CEEEEEECC
Confidence 5899999999999999999987 799999997
No 289
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=87.14 E-value=0.66 Score=41.82 Aligned_cols=35 Identities=23% Similarity=0.157 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 215 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLG-AEVTVLEAMDKF 215 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CcEEEEecCCCc
Confidence 35899999999999999999987 899999999753
No 290
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.94 E-value=0.63 Score=39.35 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+|.-|..+|..|++.+ .+|.+.++-+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G-~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHG-FAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCC-CeEEEEeCCH
Confidence 3789999999999999999987 8999998764
No 291
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=86.80 E-value=0.55 Score=42.94 Aligned_cols=34 Identities=24% Similarity=0.155 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHhcC---CCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSEN---PNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~---~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++. + .+|.|+|+++..
T Consensus 193 ~vvViGgG~ig~E~A~~l~~~~~~g-~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIFNAYKPPG-GKVTLCYRNNLI 229 (495)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCCTT-CEEEEEESSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCC-CeEEEEEcCCcc
Confidence 689999999999999999987 6 899999998753
No 292
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=86.79 E-value=0.72 Score=41.41 Aligned_cols=35 Identities=20% Similarity=0.187 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMK-KTVHVFESLENL 182 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CeEEEEEccCcc
Confidence 46899999999999999999987 899999998753
No 293
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.63 E-value=0.66 Score=39.60 Aligned_cols=32 Identities=19% Similarity=0.399 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC--eEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNW--KVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG~ 93 (224)
-+.|||+|..|..+|..|++.+ . +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g-~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRG-IAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCC-CCCEEEEEeCCh
Confidence 5899999999999999999986 5 899998864
No 294
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.62 E-value=0.72 Score=39.60 Aligned_cols=31 Identities=29% Similarity=0.353 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||+|.-|+.+|.+|+ ++ .+|.++.+.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g-~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LY-HDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TT-SEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-cC-CceEEEECCH
Confidence 4789999999999999999 76 7999998875
No 295
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=86.55 E-value=0.65 Score=40.02 Aligned_cols=31 Identities=23% Similarity=0.425 Sum_probs=27.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
-.+.|||+|.-|+.+|.+|++++ .+|.++ +-
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G-~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAG-HEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCC-CeEEEE-Ec
Confidence 35799999999999999999987 789988 53
No 296
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=86.39 E-value=0.6 Score=42.59 Aligned_cols=34 Identities=24% Similarity=0.164 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHhcC---CCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN---PNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~---~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++. + .+|.++|+++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g-~~Vtlv~~~~~ 224 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARG-GQVDLAYRGDM 224 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTT-CEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCc-CeEEEEEcCCC
Confidence 3689999999999999999987 6 89999999975
No 297
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=85.88 E-value=0.67 Score=38.49 Aligned_cols=36 Identities=28% Similarity=0.248 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.-.++|||+|..|+-+|..|.+.+ .+|.++++++..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g-~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYS-TKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHS-SEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC-CeEEEEEeCCCC
Confidence 357999999999999999999986 899999998764
No 298
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=85.86 E-value=0.78 Score=37.69 Aligned_cols=33 Identities=12% Similarity=-0.023 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ +|.+++++..
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g--~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG--ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS--EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC--cEEEEECCCC
Confidence 46899999999999999999985 9999998875
No 299
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=85.76 E-value=0.81 Score=42.08 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G-~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATG-RRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CeEEEEEecCcc
Confidence 46899999999999999999987 899999998753
No 300
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=85.71 E-value=0.8 Score=42.57 Aligned_cols=35 Identities=29% Similarity=0.385 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g-~~Vtlv~~~~~~ 222 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERG-IEVTLVEMANQV 222 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-CeEEEEecCCcc
Confidence 46899999999999999999987 899999998753
No 301
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=85.26 E-value=0.95 Score=37.81 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++++++..
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~-~~v~~~~~~~~~ 189 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIA-KEVSIIHRRDKF 189 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTB-SEEEEECSSSSC
T ss_pred CEEEEECCCHhHHHHHHHHHhhC-CeEEEEEecCcC
Confidence 46899999999999999999986 799999998753
No 302
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=85.24 E-value=0.84 Score=41.57 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g-~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELG-VPVTVVASQDHV 217 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTT-CCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CeEEEEEcCCcc
Confidence 36899999999999999999986 899999999753
No 303
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=85.24 E-value=0.87 Score=41.32 Aligned_cols=32 Identities=16% Similarity=0.060 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|||+|..|+-+|..|++.+ .+|.++|++.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g-~~Vtlv~~~~ 218 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIG-LDTTVMMRSI 218 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHHcC-CceEEEEcCc
Confidence 5899999999999999999986 8999999875
No 304
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.03 E-value=1.1 Score=35.71 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=27.5
Q ss_pred EEEEC-CChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVG-GGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+.||| +|..|..+|.+|++.+ .+|.++++-+
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLG-HEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTT-CEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 67999 9999999999999987 7999988753
No 305
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=84.96 E-value=0.89 Score=39.10 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
.+.|||+|..|..+|.+|++.+ .+|.++++-
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g-~~V~~~~r~ 36 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKG-QSVLAWDID 36 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 5899999999999999999987 789999775
No 306
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=84.95 E-value=0.66 Score=42.77 Aligned_cols=35 Identities=31% Similarity=0.304 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++..
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g-~~Vtlv~~~~~l 390 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIV-EHVTLLEFAPEM 390 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHB-SEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhC-CEEEEEEeCccc
Confidence 36899999999999999999976 799999998753
No 307
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=84.93 E-value=1.1 Score=37.17 Aligned_cols=35 Identities=23% Similarity=0.217 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|.+.+ .+|.++++++..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g-~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANIC-SKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTS-SEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhC-CEEEEEEeCCCC
Confidence 46899999999999999999986 899999998754
No 308
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=84.79 E-value=0.97 Score=38.00 Aligned_cols=32 Identities=16% Similarity=0.367 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.++|||+|..|+-+|..|++.+ +|.+++++.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~--~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA--ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS--EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC--CEEEEECCC
Confidence 46899999999999999999986 699999885
No 309
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=84.56 E-value=0.98 Score=40.95 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g-~~Vtli~~~~~ 225 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLG-VKTTLLHRGDL 225 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcC-CeEEEEECCCc
Confidence 46899999999999999999987 79999999875
No 310
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=84.36 E-value=0.81 Score=41.26 Aligned_cols=35 Identities=23% Similarity=0.305 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|+-+|..|++. + .+|.++|+++..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g-~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWG-IDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHC-CEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcC-CcEEEEEccCcc
Confidence 4799999999999999999997 6 799999998753
No 311
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=84.34 E-value=1.1 Score=40.69 Aligned_cols=35 Identities=20% Similarity=0.202 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHhc--------------------CCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSE--------------------NPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae--------------------~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++ .+-.+|.|+++.+.
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999993 44237999999874
No 312
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=84.31 E-value=0.61 Score=37.97 Aligned_cols=33 Identities=12% Similarity=0.094 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.+||+|.|..|..+|..|.+.+ . |.++|+-+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g-~-v~vid~~~~ 42 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSE-V-FVLAEDENV 42 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSE-E-EEEESCGGG
T ss_pred CEEEEECCChHHHHHHHHHHhCC-e-EEEEECCHH
Confidence 45899999999999999999986 6 999987643
No 313
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=84.03 E-value=1 Score=41.49 Aligned_cols=32 Identities=19% Similarity=0.092 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|||+|..|+-+|..|++.+ .+|.++|+..
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G-~~Vtlv~~~~ 243 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIG-LDVTVMVRSI 243 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCEEEEESSC
T ss_pred eEEEECCcHHHHHHHHHHHHcC-CeEEEEeccc
Confidence 5899999999999999999986 8999999863
No 314
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.99 E-value=0.9 Score=37.98 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.-.++|||+|..|+.+|..|+..|-.+|.|++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 46799999999999999999998744899998876
No 315
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.71 E-value=0.83 Score=38.94 Aligned_cols=29 Identities=21% Similarity=0.384 Sum_probs=26.8
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
+.|||+|..|..+|..|++.+ .+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g-~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNG-NEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHC-CEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCC-CeEEEEEc
Confidence 679999999999999999987 79999987
No 316
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.40 E-value=1.1 Score=38.56 Aligned_cols=34 Identities=44% Similarity=0.582 Sum_probs=29.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
.+.-+.|||+|.-|+.+|.+|++++ .+|.+..+.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G-~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENG-EEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCC-CeEEEEeCC
Confidence 3567999999999999999999987 799998775
No 317
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=83.05 E-value=1.3 Score=39.86 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++.+ .+|.++|+++.
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g-~~Vt~v~~~~~ 204 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLG-VKTTLIYRGKE 204 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcC-CeEEEEEcCCc
Confidence 46899999999999999999987 79999999875
No 318
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=82.87 E-value=1.4 Score=40.09 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.++|||+|..|.-+|..|.+.+..+|.++++....
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 369999999999999999998874579999998753
No 319
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=82.83 E-value=1.3 Score=39.96 Aligned_cols=32 Identities=22% Similarity=0.201 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|||+|..|+-+|..|++.+ .+|.++|+..
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g-~~Vtlv~~~~ 220 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGLG-YEPTVMVRSI 220 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCC
Confidence 5899999999999999999987 8999999864
No 320
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=82.66 E-value=1.6 Score=36.12 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.|+|.-|..++.+|.+.+ .+|.++.+...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQG-HEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCcc
Confidence 3899999999999999999987 79999987653
No 321
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=82.43 E-value=0.79 Score=34.43 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--+.|||+|..|..+|..|.+.+ .+|.+.++-+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g-~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQ-YKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTT-CEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEcCCH
Confidence 45899999999999999999876 6798888754
No 322
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=82.42 E-value=1.2 Score=40.94 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.--+.|||.|.-|+.+|..|++++ .+|.++++-+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G-~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG-HDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence 456889999999999999999987 7999998753
No 323
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.09 E-value=1.5 Score=35.47 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--+.|||+|..|..+|.+|.+.+ .+|.++++.+
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g-~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSG-FKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 35899999999999999999987 7899988754
No 324
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=82.06 E-value=1.3 Score=40.39 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+|.-|+.+|..|+..+ .+|.++++-+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G-~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVG-ISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT-CEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCC-CeEEEEECCH
Confidence 4889999999999999999987 8999998754
No 325
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=81.96 E-value=1 Score=38.65 Aligned_cols=33 Identities=21% Similarity=0.414 Sum_probs=29.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
.--++|||+|..|...|..|.+.+ .+|.|++.-
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~G-a~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTG-CKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGT-CEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCC-CEEEEEcCC
Confidence 345899999999999999999987 899999753
No 326
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.88 E-value=1.4 Score=38.97 Aligned_cols=33 Identities=27% Similarity=0.286 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.+.|||+|.-|..+|..|++++ .+|.+..+.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G-~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKG-QKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT-CCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCC-CeEEEEeCCH
Confidence 46899999999999999999987 7899988753
No 327
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=81.46 E-value=1.4 Score=38.32 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+|.-|..+|..|++++ .+|.+.++-+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G-~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGG-FRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 3789999999999999999987 8999987654
No 328
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=81.45 E-value=1.5 Score=37.66 Aligned_cols=31 Identities=26% Similarity=0.278 Sum_probs=27.2
Q ss_pred EEEECCChHHHHHHHHHhcCCCC--eEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNW--KVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG~ 93 (224)
+.|||+|..|..+|..|+..+ . .|.|++.-.
T Consensus 3 I~VIGaG~vG~~la~~la~~g-~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRG-SCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTT-CCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCC-CCCEEEEEeCCH
Confidence 689999999999999999986 5 799998753
No 329
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=81.32 E-value=1.2 Score=38.81 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--+.|||+|.-|..+|..|++++..+|.|++.-+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4589999999999999999998743899998764
No 330
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=81.30 E-value=1.5 Score=36.49 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=28.8
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
+.--++|||+|..|...|..|.+.+ .+|.|+..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~G-A~VtVvap 62 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEG-AAITVVAP 62 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGC-CCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEECC
Confidence 3467899999999999999999987 79999864
No 331
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=81.28 E-value=1.2 Score=41.62 Aligned_cols=33 Identities=15% Similarity=0.050 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-..+|||+|..|+-+|.-|+.-+ .+|.|+++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG-~~VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLG-YDVTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT-CCEEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHhcC-CeEEEecccc
Confidence 35899999999999999999987 8999999864
No 332
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.21 E-value=1.7 Score=38.53 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
...-++|||+|..|+.+|..|+..|-.++.|++...-
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 3578999999999999999999988667889988763
No 333
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=81.06 E-value=1.4 Score=37.92 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+|..|..+|..|++.+..+|.|++.-+
T Consensus 6 kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 488999999999999999998733899998865
No 334
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=80.92 E-value=1.2 Score=38.77 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||+|.-|..+|.+|++++ .+|.++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G-~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKC-REVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTE-EEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence 5899999999999999999987 7899987653
No 335
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=80.88 E-value=1.8 Score=39.18 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHhcC--------------------CCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN--------------------PNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~--------------------~~~~VLlLEaG~~ 94 (224)
-.++|||+|..|+-+|..|++. +..+|.|+++.+.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 3689999999999999999974 4358999998764
No 336
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=80.79 E-value=1.7 Score=35.77 Aligned_cols=32 Identities=16% Similarity=0.422 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|.|+|.-|..++.+|.+++ .+|.++-+.+
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g-~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQG-WRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGT-CEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHCC-CEEEEEEcCh
Confidence 3899999999999999999986 8999998765
No 337
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=80.66 E-value=1.4 Score=38.86 Aligned_cols=29 Identities=21% Similarity=0.360 Sum_probs=25.8
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEee
Q psy7388 61 DFIVVGGGSAGNVVANRLSEN-PNWKVLLLE 90 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~-~~~~VLlLE 90 (224)
.+.|||+|..|+.+|..|++. + .+|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G-~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDG-VEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTT-EEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CEEEEEe
Confidence 378999999999999999984 6 7999987
No 338
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=80.50 E-value=1.9 Score=35.55 Aligned_cols=35 Identities=20% Similarity=0.304 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.--+-|||.|.-|..+|.+|++++ .+|.+.++-+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G-~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG-HEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC-CEEEEEeCChh
Confidence 356889999999999999999987 79999987654
No 339
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.46 E-value=2.2 Score=33.48 Aligned_cols=31 Identities=16% Similarity=0.289 Sum_probs=27.7
Q ss_pred EEEEC-CChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVG-GGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|+| +|..|..++.+|.+.+ .+|.++-+.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRG-HEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCC-CEEEEEEcCc
Confidence 68999 5999999999999987 8999998875
No 340
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=80.21 E-value=1.8 Score=37.66 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--+.|||+|..|..+|..|++.+..+|.|++.-.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3589999999999999999998743899998864
No 341
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=80.19 E-value=1.8 Score=40.06 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-.+||||.|.-|..+|..|.+.+ ..|++||.-+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g-~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP-VPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT-CCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC-CCEEEEECChHH
Confidence 46999999999999999999986 899999987653
No 342
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=80.16 E-value=2 Score=33.84 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=27.6
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|.|+ |.-|..++.+|.+.+ .+|.++-+.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRG-HEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCC-CEEEEEEecc
Confidence 789997 999999999999987 8999998764
No 343
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.16 E-value=1.4 Score=39.62 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=27.7
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+.|||.|.-|+.+|..|++.+ .+|.++++-+
T Consensus 3 I~VIG~G~vG~~~A~~la~~G-~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARG-HEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCC-CEEEEEECCH
Confidence 679999999999999999987 7999998753
No 344
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=79.73 E-value=1.7 Score=39.58 Aligned_cols=32 Identities=31% Similarity=0.309 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||.|.-|+.+|..|++++ .+|.++++-+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G-~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELG-ANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcC-CEEEEEECCH
Confidence 4789999999999999999987 7999998754
No 345
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=79.54 E-value=1.8 Score=39.90 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-+.|||+|.-|..+|..|++.+ .+|.+.++-+.
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG-~~V~l~D~~~e 88 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAG-IETFLVVRNEQ 88 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCC-CeEEEEECcHH
Confidence 4889999999999999999987 89999987643
No 346
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=79.42 E-value=1.6 Score=39.40 Aligned_cols=35 Identities=23% Similarity=0.224 Sum_probs=31.1
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++--++|+|+|.+|..+|..|...|-.+|.|+++-
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 46789999999999999999998874589999987
No 347
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=79.24 E-value=2.4 Score=36.43 Aligned_cols=33 Identities=30% Similarity=0.500 Sum_probs=28.2
Q ss_pred EEEECCChHHHHHHHHHhcCC-CCeEEEeecCCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENP-NWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG~~ 94 (224)
+.|||+|..|..+|..|++++ ...|.+++.-+.
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 689999999999999999862 378999998653
No 348
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=79.06 E-value=2.3 Score=32.84 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=28.2
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|+|+ |.-|..++.+|.+++ .+|.++.+.+.
T Consensus 6 ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~ 38 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSS 38 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGG
T ss_pred EEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeChh
Confidence 788997 999999999999987 89999987653
No 349
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=79.05 E-value=2.1 Score=35.56 Aligned_cols=31 Identities=23% Similarity=0.200 Sum_probs=27.2
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+.|||+|.-|..+|..|.+.+ .+|.+.++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g-~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRG-HYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHCC-CEEEEEECCH
Confidence 679999999999999999987 6899987653
No 350
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=78.82 E-value=2.1 Score=35.80 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=31.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
...-++|||.|..|+.+|..|+..|-.++.|++...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357899999999999999999998855788887764
No 351
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=78.42 E-value=2.2 Score=36.23 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.+.|||.|.-|..+|.+|++.+ .+|.+.++-+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAG-LSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CeEEEEECCH
Confidence 35889999999999999999987 7999997754
No 352
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=78.27 E-value=1.7 Score=37.55 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=27.2
Q ss_pred EEEECCChHHHHHHHHHhcCCCC--eEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNW--KVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG~ 93 (224)
+.|||+|..|..+|..|++.+ . .|.+++.-+
T Consensus 3 I~VIGaG~~G~~la~~l~~~g-~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKG-FAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHT-CCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCC-CCCeEEEEeCCh
Confidence 679999999999999999876 5 899998754
No 353
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=78.26 E-value=2.4 Score=36.04 Aligned_cols=33 Identities=21% Similarity=0.445 Sum_probs=29.2
Q ss_pred cEEEEC-CChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVG-GGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-+.||| .|.-|..+|..|++.+ .+|.++++.+.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G-~~V~~~~~~~~ 56 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASG-YPISILDREDW 56 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT-CCEEEECTTCG
T ss_pred EEEEEcCCCHHHHHHHHHHHhCC-CeEEEEECCcc
Confidence 489999 9999999999999987 79999987653
No 354
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=78.22 E-value=2.3 Score=35.72 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=28.6
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+.|||.|.-|..+|.+|++.+ .+|.+.++-+.
T Consensus 4 i~iIG~G~mG~~~a~~l~~~G-~~V~~~dr~~~ 35 (287)
T 3pef_A 4 FGFIGLGIMGSAMAKNLVKAG-CSVTIWNRSPE 35 (287)
T ss_dssp EEEECCSHHHHHHHHHHHHTT-CEEEEECSSGG
T ss_pred EEEEeecHHHHHHHHHHHHCC-CeEEEEcCCHH
Confidence 689999999999999999987 89999987653
No 355
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=78.13 E-value=2.3 Score=36.92 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+|..|..+|..|+..+..+|.|++.-.
T Consensus 6 kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 588999999999999999998743799998754
No 356
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=78.05 E-value=2.2 Score=36.37 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.+.|||.|.-|..+|.+|++.+ .+|.+.++-+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G-~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG-FKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence 45899999999999999999987 79999987653
No 357
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=78.05 E-value=2.1 Score=36.28 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.+.|||.|.-|..+|.+|++.+ .+|.+.++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g-~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMG-HTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT-CCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCC-CEEEEEeCCH
Confidence 45999999999999999999987 7899998764
No 358
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=77.99 E-value=2.3 Score=35.68 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|+|+|-.|..+|..|++.+ .+|.+..+-.
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLD-CAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHcC-CEEEEEECCH
Confidence 5899999999999999999998 8999986653
No 359
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=77.83 E-value=1.8 Score=41.64 Aligned_cols=32 Identities=9% Similarity=0.129 Sum_probs=29.8
Q ss_pred cEEEEC--CChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVG--GGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVG--sG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++||| +|..|+-+|..|++.+ .+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~G-~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATAG-HEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTT-CEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcC-CEEEEEeccc
Confidence 689998 9999999999999987 7999999987
No 360
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=77.80 E-value=2.4 Score=36.51 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=28.7
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+--+-|||.|.-|.-+|..|+ .+ .+|.+.++-+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG-~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SK-HEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT-SEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cC-CEEEEEECCH
Confidence 346789999999999999999 86 8999998754
No 361
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=77.58 E-value=2.5 Score=36.37 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+|..|..+|..|+..+..+|.|++.-.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 378999999999999999998744799998753
No 362
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=77.32 E-value=1.9 Score=39.30 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHhcC---CCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN---PNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~---~~~~VLlLEaG~ 93 (224)
-.++|||+|..|+-+|..|++. .+.+|.++|+.+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 4689999999999999999873 127899999875
No 363
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=77.05 E-value=1.8 Score=36.40 Aligned_cols=31 Identities=19% Similarity=0.197 Sum_probs=26.7
Q ss_pred cEEEECCChHHHHHHHHHhcC-----CCCeEEEeec
Q psy7388 61 DFIVVGGGSAGNVVANRLSEN-----PNWKVLLLEA 91 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~-----~~~~VLlLEa 91 (224)
.+.|||+|.-|..+|.+|++. +..+|.++.+
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 589999999999999999987 4258888876
No 364
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=76.97 E-value=2.8 Score=33.53 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=28.8
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.|+ |.-|..+|.+|.+.+ .+|.++-+.+.
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~ 56 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKG-HEPVAMVRNEE 56 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSGG
T ss_pred eEEEECCCChHHHHHHHHHHhCC-CeEEEEECChH
Confidence 4899997 999999999999987 89999987653
No 365
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=76.96 E-value=2.2 Score=35.94 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||.|.-|..+|.+|++.+ .+|.+.++-+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G-~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAG-YLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCC-CeEEEEcCCH
Confidence 3789999999999999999987 7999998754
No 366
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=76.57 E-value=3 Score=33.00 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=28.2
Q ss_pred EEEEC-CChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 62 FIVVG-GGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|.| +|.-|..++.+|.+++ .+|.++-+.+.
T Consensus 3 ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~~ 35 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKVE 35 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSS-CEEEEEESSGG
T ss_pred EEEECCCCHHHHHHHHHHHHCC-CEEEEEECCcc
Confidence 68888 7999999999999987 89999988754
No 367
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=76.49 E-value=2.3 Score=35.56 Aligned_cols=32 Identities=13% Similarity=0.258 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||.|..|..+|..|.+.+ .+|.+.++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAG-YSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCC-CEEEEEeCCH
Confidence 4889999999999999999986 7899987753
No 368
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=76.41 E-value=2.7 Score=34.95 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=26.8
Q ss_pred EEEECCChHHHHHHHHHhcCCCC--eEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNW--KVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG~ 93 (224)
+.|||.|.-|..+|..|.+.+ . +|.+.++-+
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d~~~ 36 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSG-FKGKIYGYDINP 36 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTT-CCSEEEEECSCH
T ss_pred EEEEecCHHHHHHHHHHHhcC-CCcEEEEEeCCH
Confidence 679999999999999999986 5 899887643
No 369
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=76.35 E-value=1.5 Score=35.57 Aligned_cols=33 Identities=18% Similarity=0.485 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEE-eecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLL-LEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLl-LEaG~ 93 (224)
--+.|||+|.-|..+|..|++.+ .+|.+ .++.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g-~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQ-IPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTT-CCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCCH
Confidence 35899999999999999999987 78887 66654
No 370
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=76.32 E-value=2.4 Score=39.13 Aligned_cols=32 Identities=25% Similarity=0.441 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+|.-|..+|..|++.+ .+|.+.++-+
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG-~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHG-HQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCC-CeEEEEECCH
Confidence 4789999999999999999987 8999987653
No 371
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=76.27 E-value=2 Score=35.25 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=27.1
Q ss_pred cEEEECC-Ch-HHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGG-GS-AGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGs-G~-aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
=++|.|+ |. -|..+|.+|++.+ .+|+++.+..
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G-~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEG-ADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHCC-CEEEEecCCH
Confidence 4889998 75 9999999999997 8999987653
No 372
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=76.15 E-value=2.7 Score=35.18 Aligned_cols=32 Identities=13% Similarity=0.402 Sum_probs=28.3
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||+ |.-|..+|.+|.+.+ .+|.+.++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSA-HHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSS-SEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence 4889999 999999999999987 7999988653
No 373
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=76.04 E-value=2.6 Score=35.67 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.+.|||.|.-|..+|.+|++.+ .+|.+.++-+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G-~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWP-GGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTST-TCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence 46899999999999999999987 79999987664
No 374
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=76.03 E-value=2.3 Score=39.20 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.++++.+..
T Consensus 188 ~V~VIG~G~sg~e~a~~l~~~~-~~vtv~~r~~~~ 221 (542)
T 1w4x_A 188 RVGVIGTGSSGIQVSPQIAKQA-AELFVFQRTPHF 221 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHHB-SEEEEEESSCCC
T ss_pred EEEEECCCccHHHHHHHHhhcC-ceEEEEEcCCcc
Confidence 5789999999999999999976 799999998754
No 375
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=75.75 E-value=2.9 Score=39.78 Aligned_cols=35 Identities=20% Similarity=0.361 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
..-++|||+|..|+.+|..|+..|-.++.|++...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45799999999999999999998866899998774
No 376
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=75.64 E-value=2.8 Score=42.08 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=30.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.++|||+|..|+-+|..|.+.+..+|.++|+.+.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 7999999999999999999987458999999873
No 377
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=75.54 E-value=3.2 Score=34.44 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=28.9
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.|+ |.-|..++.+|.+.+ .+|.++.+...
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVASG-EEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHHCC-CEEEEEecCCc
Confidence 4889998 999999999999987 89999988654
No 378
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=75.53 E-value=2.4 Score=38.37 Aligned_cols=36 Identities=33% Similarity=0.444 Sum_probs=31.0
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++--++|+|+|.+|..+|.-|...|-.+|.++++-+
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 457899999999999999999987734899999864
No 379
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=75.25 E-value=4.1 Score=32.60 Aligned_cols=32 Identities=16% Similarity=0.327 Sum_probs=27.3
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|.|+ |.-|..+|.+|++.+ .+|.++.+...
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r~~~ 36 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAG-HTVIGIDRGQA 36 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCC-CEEEEEeCChh
Confidence 678876 899999999999987 89999987653
No 380
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=75.09 E-value=2.8 Score=37.40 Aligned_cols=30 Identities=23% Similarity=0.217 Sum_probs=26.7
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+.|||.|.-|+.+|..|++ + .+|.++++-+
T Consensus 3 I~VIG~G~vG~~~A~~La~-G-~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSL-Q-NEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTT-T-SEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhC-C-CEEEEEECCH
Confidence 6799999999999999998 6 7999998753
No 381
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=75.09 E-value=2.8 Score=34.71 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=26.9
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+.|||.|..|..+|.+|++ + .+|.+.++.+
T Consensus 4 i~iiG~G~~G~~~a~~l~~-g-~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLAR-R-FPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHT-T-SCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhC-C-CeEEEEeCCH
Confidence 6899999999999999999 6 7899998764
No 382
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=75.02 E-value=2.8 Score=34.97 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=27.7
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+.|||.|.-|..+|.+|++.+ .+|.+.++-+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g-~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHG-YPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTT-CCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 679999999999999999987 7899998754
No 383
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=74.95 E-value=2.6 Score=36.15 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.+.|||.|.-|..+|.+|++.+ .+|.+.++-+
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G-~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAG-YALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCC-CeEEEEcCCH
Confidence 36899999999999999999987 7999987764
No 384
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=74.87 E-value=3 Score=39.79 Aligned_cols=36 Identities=19% Similarity=0.333 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..-++|||+|..|+.+|..|+..|--++.|++...-
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 467999999999999999999988668999988763
No 385
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=74.80 E-value=10 Score=35.00 Aligned_cols=34 Identities=6% Similarity=0.112 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+--+||+|.|.-|..+|..|.+.+ ..|+++|.-+
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~-~~vvvid~~~ 160 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRN-HLFVVVTDNY 160 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTT-CCEEEEESCH
T ss_pred CCeEEEECCChHHHHHHHHHHHCC-CCEEEEECCH
Confidence 457999999999999999999986 8999999765
No 386
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=74.67 E-value=2.8 Score=38.63 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHhcC-CCC-eEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSEN-PNW-KVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~-~~~-~VLlLEaG~~ 94 (224)
-.+.|||.|.-|+.+|..|+++ | . +|.++++-+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G-~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPC-FEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTT-CCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCC-CCeEEEEECChh
Confidence 3589999999999999999999 6 7 9999998765
No 387
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.39 E-value=3 Score=34.28 Aligned_cols=29 Identities=21% Similarity=0.213 Sum_probs=25.8
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
+.|||.|.-|..+|.+|++.+ .+|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g-~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRG-VEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTT-CEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCC-CeEEEeCC
Confidence 579999999999999999987 78988765
No 388
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=74.28 E-value=2.6 Score=36.38 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=31.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
...-++|||+|..|+.+|..|+..|--++.|++...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 457899999999999999999998756888888765
No 389
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=74.24 E-value=2.9 Score=36.87 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.--++|||+|..|+.+|..|+..|--++.|++...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 46799999999999999999998866899998765
No 390
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=73.90 E-value=3 Score=34.94 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||.|..|..+|..|++.+ .+|.+.++-+
T Consensus 6 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~~~~ 37 (301)
T 3cky_A 6 KIGFIGLGAMGKPMAINLLKEG-VTVYAFDLME 37 (301)
T ss_dssp EEEEECCCTTHHHHHHHHHHTT-CEEEEECSSH
T ss_pred EEEEECccHHHHHHHHHHHHCC-CeEEEEeCCH
Confidence 5889999999999999999986 7999987753
No 391
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=73.84 E-value=3.6 Score=34.57 Aligned_cols=32 Identities=22% Similarity=0.196 Sum_probs=27.7
Q ss_pred ccEEEEC-CChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 60 YDFIVVG-GGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 60 yD~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
--++|+| +|..|..+|.+|++.+ .+|.++.+-
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G-~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEG-AEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCc-CEEEEEECC
Confidence 3589999 9999999999999987 788888764
No 392
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=73.83 E-value=3.6 Score=33.08 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=28.8
Q ss_pred cEEEEC-CChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVG-GGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.| +|..|..+|.+|++.+..+|.++.+.+.
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~ 59 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPA 59 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGG
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChh
Confidence 488999 6999999999999987579999887653
No 393
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=73.59 E-value=3.4 Score=35.86 Aligned_cols=31 Identities=26% Similarity=0.414 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC-eEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNW-KVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG 92 (224)
-+.|||+|..|..+|..|+..+ . .|.|++.-
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~g-~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQKE-LADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhCC-CCeEEEEecc
Confidence 5899999999999999999986 6 89999876
No 394
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=73.56 E-value=3.5 Score=36.21 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--++|+|+|..|..+|..|...+ .+|.++++.+
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMG-AQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence 45899999999999999999987 6999998754
No 395
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=73.48 E-value=3.4 Score=34.92 Aligned_cols=30 Identities=20% Similarity=0.489 Sum_probs=26.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
-++|+|+|-.|..+|.+|++.+ +|.+..+-
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN--NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS--EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC--CEEEEECC
Confidence 4899999999999999999986 99988664
No 396
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=73.46 E-value=4.1 Score=32.22 Aligned_cols=32 Identities=13% Similarity=0.209 Sum_probs=27.3
Q ss_pred EEEEC-CChHHHHHHHHHh-cCCCCeEEEeecCCC
Q psy7388 62 FIVVG-GGSAGNVVANRLS-ENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVG-sG~aG~v~A~rLa-e~~~~~VLlLEaG~~ 94 (224)
++|.| +|.-|..+|.+|+ +.+ .+|.++.+.+.
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g-~~V~~~~r~~~ 41 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTD-MHITLYGRQLK 41 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCC-CEEEEEESSHH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCC-ceEEEEecCcc
Confidence 88999 5999999999999 676 89999987643
No 397
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=73.35 E-value=2.3 Score=35.65 Aligned_cols=32 Identities=19% Similarity=0.263 Sum_probs=28.5
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
+-|||.|.-|..+|.+|++.+ .+|.+.++-+.
T Consensus 4 I~iiG~G~mG~~~a~~l~~~G-~~V~~~dr~~~ 35 (287)
T 3pdu_A 4 YGFLGLGIMGGPMAANLVRAG-FDVTVWNRNPA 35 (287)
T ss_dssp EEEECCSTTHHHHHHHHHHHT-CCEEEECSSGG
T ss_pred EEEEccCHHHHHHHHHHHHCC-CeEEEEcCCHH
Confidence 679999999999999999987 79999987653
No 398
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=73.09 E-value=4 Score=34.87 Aligned_cols=33 Identities=12% Similarity=0.177 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.++|+|+|.+|..+|..|.+.+-.+|.+..+-.
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 599999999999999999998734899887653
No 399
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=72.88 E-value=2.7 Score=35.30 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--++|+|+|-+|..+|..|++.+ .+|.+..+-.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCH
Confidence 35899999999999999999998 8999987754
No 400
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=72.80 E-value=3.6 Score=35.41 Aligned_cols=32 Identities=22% Similarity=0.385 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC--eEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNW--KVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG~ 93 (224)
-+.|||.|.-|..+|..|.+.+ . +|.+.++-+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT-CCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhCC-CCCEEEEEECCH
Confidence 5899999999999999999987 6 899887654
No 401
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=72.77 E-value=3.1 Score=38.17 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
-++|+|+|..|..+|..|++.++.+|.++.+-
T Consensus 25 ~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 25 NVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred EEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 58999999999999999999855789988764
No 402
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=72.75 E-value=3.8 Score=34.87 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
--++|+|+|-+|..+|..|.+.+ .+|.+.-+-..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG-LQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence 46899999999999999999998 89999877654
No 403
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=72.70 E-value=3.4 Score=32.66 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=28.7
Q ss_pred cEEEEC-CChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVG-GGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.| +|.-|..++.+|.+.+ .+|.++.+.+.
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 39 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPE 39 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGG
T ss_pred EEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcc
Confidence 378999 5999999999999987 89999988754
No 404
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=72.69 E-value=2 Score=42.86 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++|||+|..|+-+|..|++.+ .+|.|||+.+..
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G-~~Vtvv~~~~~~ 319 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATG-GVVAVIDARSSI 319 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGT-CCSEEEESCSSC
T ss_pred eEEEEcCCHHHHHHHHHHHHcC-CcEEEEECCCcc
Confidence 6899999999999999999987 679999998753
No 405
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=72.67 E-value=4.5 Score=34.15 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=29.1
Q ss_pred ccEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
--++|.|+ |.-|..++.+|.+.+ .+|.++.+...
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~ 54 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQG-RTVRGFDLRPS 54 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT-CCEEEEESSCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCCCC
Confidence 45899997 999999999999987 89999987653
No 406
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=72.31 E-value=3.6 Score=37.72 Aligned_cols=34 Identities=18% Similarity=0.234 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.-++.|||.|.-|..+|.+|++++ .+|.+..+-+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRG-YTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTT-CCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCC-CeEEEEeCCH
Confidence 457999999999999999999987 7999987753
No 407
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=72.20 E-value=4.2 Score=34.45 Aligned_cols=33 Identities=24% Similarity=0.216 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--+.|||.|..|..+|.+|...+ .+|++.++-+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG-AKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC-CEEEEEECCH
Confidence 46899999999999999999887 7999998754
No 408
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=72.18 E-value=3.6 Score=38.15 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--++|+|+|..|..+|.+|...| .+|++.|.-+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G-A~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG-ARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCH
Confidence 45899999999999999999987 7999988753
No 409
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=72.16 E-value=3.3 Score=35.37 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=27.3
Q ss_pred EEEECCChHHHHHHHHHhcCCC-CeEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPN-WKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~-~~VLlLEaG~ 93 (224)
+.|||+|..|..+|..|++++- ..|.++++-.
T Consensus 4 I~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 4 IGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 7899999999999999998752 4799998754
No 410
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=72.05 E-value=3.8 Score=34.89 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.+.|||.|.-|..+|.+|.+.+ .+|.+.++-+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G-~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQG-KRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 46899999999999999999987 7999987754
No 411
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=71.91 E-value=3.6 Score=37.64 Aligned_cols=31 Identities=32% Similarity=0.415 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
.+.|||.|.-|..+|.+|++++ .+|.+.++-
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G-~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKG-FKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 4789999999999999999987 789999774
No 412
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=71.84 E-value=2.3 Score=36.50 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.+||+|.|..|..+|..|.+.+ . |+++|.-+.
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g-~-v~vid~~~~ 148 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSE-V-FVLAEDENV 148 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSC-E-EEEESCGGG
T ss_pred CEEEECCcHHHHHHHHHHHhCC-c-EEEEeCChh
Confidence 5999999999999999999987 6 999987653
No 413
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=71.84 E-value=4.4 Score=36.16 Aligned_cols=31 Identities=26% Similarity=0.491 Sum_probs=26.7
Q ss_pred EEEECCChHHHHHHHHHhcCCCC--eEEEeecC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNW--KVLLLEAG 92 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG 92 (224)
++|+|+|..|..+|..|++.++. +|.+..+-
T Consensus 4 VlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~ 36 (405)
T 4ina_A 4 VLQIGAGGVGGVVAHKMAMNREVFSHITLASRT 36 (405)
T ss_dssp EEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC
T ss_pred EEEECCCHHHHHHHHHHHhCCCCceEEEEEECC
Confidence 78999999999999999998764 88887654
No 414
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=71.73 E-value=2.8 Score=38.82 Aligned_cols=34 Identities=21% Similarity=0.392 Sum_probs=29.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC---eEEEeecC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNW---KVLLLEAG 92 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~---~VLlLEaG 92 (224)
.--++|||+|..|.++|..|+++++. .|++++.-
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~ 49 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAE 49 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccc
Confidence 45699999999999999999998766 69999854
No 415
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=71.69 E-value=3.5 Score=39.92 Aligned_cols=32 Identities=28% Similarity=0.489 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+-|||+|.-|..+|..|++++ .+|.+.++-+
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG-~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSN-YPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTT-CCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCC-CEEEEEECCH
Confidence 4889999999999999999987 8999998754
No 416
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=71.61 E-value=4.4 Score=34.40 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--+.|||.|..|..+|.+|...+ .+|++.++-.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G-~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALG-ANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCC-CEEEEEECCH
Confidence 45899999999999999999887 7999998754
No 417
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=71.55 E-value=2.2 Score=36.72 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHhcCC------CCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENP------NWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~------~~~VLlLEaG~~ 94 (224)
-+.|||+|.-|..+|..|++++ ..+|.++++.+.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 4899999999999999999875 158999987654
No 418
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=71.54 E-value=4.8 Score=33.38 Aligned_cols=31 Identities=26% Similarity=0.544 Sum_probs=27.1
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|.|+ |.-|..++.+|.+++ .+|.++.+..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~ 34 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVELG-YEVVVVDNLS 34 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEECCCS
T ss_pred EEEECCCChHHHHHHHHHHhCC-CEEEEEeCCC
Confidence 678887 999999999999987 8999997754
No 419
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=71.38 E-value=4.9 Score=33.65 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=27.3
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|.|+ |.-|..+|.+|.+.+ .+|.++.+..
T Consensus 6 vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~ 37 (345)
T 2z1m_A 6 ALITGIRGQDGAYLAKLLLEKG-YEVYGADRRS 37 (345)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEECSCC
T ss_pred EEEECCCChHHHHHHHHHHHCC-CEEEEEECCC
Confidence 788887 999999999999987 8999987764
No 420
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=71.25 E-value=3.4 Score=34.75 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--+.|||+|..|..+|..|.+.+ .+|.+..+-.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g-~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG-AKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT-CEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcC-CEEEEEECCH
Confidence 35899999999999999999987 5999987653
No 421
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=71.09 E-value=3.6 Score=33.65 Aligned_cols=32 Identities=22% Similarity=0.515 Sum_probs=26.7
Q ss_pred EEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
+.|||.|.-|..+|..|++.+..+|.+.++-+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 67999999999999999987525888887653
No 422
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=70.97 E-value=2.9 Score=38.29 Aligned_cols=32 Identities=16% Similarity=0.338 Sum_probs=28.1
Q ss_pred cEEEECCChHHHHHHHHHhcCC-CCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENP-NWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG 92 (224)
-+.|||.|.-|+.+|..|++.+ +.+|.++++-
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5899999999999999999973 4799999864
No 423
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=70.78 E-value=3.7 Score=34.23 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=27.2
Q ss_pred cEEEECCChHHHHHHHHHhcCC-CCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENP-NWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG 92 (224)
-+.|||.|.-|..+|..|++.+ +.+|.+.++-
T Consensus 8 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 8 TIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred eEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 4889999999999999999874 3789888764
No 424
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=70.63 E-value=2.8 Score=34.93 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=26.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEee
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLE 90 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLE 90 (224)
-+.|||.|..|..+|.+|++.+ .+|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g-~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAG-HQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTT-CEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCC-CEEEEEc
Confidence 3789999999999999999986 7999887
No 425
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=70.51 E-value=5.6 Score=32.96 Aligned_cols=31 Identities=26% Similarity=0.389 Sum_probs=26.9
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|.|+ |.-|..++.+|.+++ .+|.+|-+.+
T Consensus 3 ILVTGatGfIG~~L~~~L~~~G-~~V~~l~R~~ 34 (298)
T 4b4o_A 3 VLVGGGTGFIGTALTQLLNARG-HEVTLVSRKP 34 (298)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEESSC
T ss_pred EEEECCCCHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 678887 999999999999987 8999987654
No 426
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=70.49 E-value=3.1 Score=36.39 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCC------CCeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENP------NWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~------~~~VLlLEaG~~ 94 (224)
-+.|||+|.-|+.+|.+|++++ ..+|.+..+.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 4899999999999999999875 157999887654
No 427
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=70.42 E-value=4.8 Score=36.77 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHhcC-CCCeEEEeecCCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSEN-PNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~-~~~~VLlLEaG~~~ 95 (224)
.++|||+|.+|+-+|..|++. +..+|.++=+.+..
T Consensus 248 rV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 248 NIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 499999999999999999874 45789999888643
No 428
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=70.34 E-value=3.9 Score=33.41 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHhcCCC---CeEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPN---WKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~---~~VLlLEaG~~ 94 (224)
-+.|||.|.-|..+|.+|.+.+. .+|.+.++.+.
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 48899999999999999998762 47999887653
No 429
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=70.26 E-value=3.7 Score=39.11 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=30.6
Q ss_pred cEEEEC--CChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 61 DFIVVG--GGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 61 D~IVVG--sG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
.++||| +|..|+-+|..|++.+ .+|.++|+++..
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g-~~Vtlv~~~~~l 560 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKG-YEVSIVTPGAQV 560 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTT-CEEEEEESSSST
T ss_pred EEEEEcCCCCccHHHHHHHHHhCC-CeeEEEeccccc
Confidence 499999 9999999999999987 799999998753
No 430
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=70.18 E-value=4.2 Score=37.19 Aligned_cols=32 Identities=13% Similarity=0.217 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+-|||.|.-|..+|..|++++ .+|.+.++-+
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G-~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHG-FVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT-CCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHCC-CeEEEEeCCH
Confidence 5889999999999999999987 7899998754
No 431
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=70.17 E-value=3.2 Score=37.76 Aligned_cols=33 Identities=21% Similarity=0.196 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-..-|||.|.-|..+|..|+++| .+|.+.+.-+
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G-~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHG-VDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCC-CEEEEEECCH
Confidence 45679999999999999999997 8999998764
No 432
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=70.11 E-value=4.8 Score=36.67 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
..-+-|||.|.-|+.+|..|++++ .+|.+.++-+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G-~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG-HEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence 466789999999999999999997 89999988654
No 433
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=70.04 E-value=3.6 Score=35.19 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeecC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAG 92 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG 92 (224)
-.+-|||.|.-|..+|.+|++.+ . +|.+.++-
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G-~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAG-AIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS-CCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCC-CCeEEEEcCC
Confidence 35899999999999999999987 6 89999884
No 434
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=69.79 E-value=3.7 Score=33.82 Aligned_cols=31 Identities=16% Similarity=0.378 Sum_probs=27.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCe-EEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWK-VLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~-VLlLEaG 92 (224)
-+.|||.|..|..+|..|++.+ .+ |.+.++.
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g-~~~v~~~~~~ 43 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKG-FRIVQVYSRT 43 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT-CCEEEEECSS
T ss_pred eEEEEcCCHHHHHHHHHHHHCC-CeEEEEEeCC
Confidence 5899999999999999999986 66 8888764
No 435
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=69.75 E-value=4.6 Score=35.87 Aligned_cols=31 Identities=16% Similarity=0.297 Sum_probs=27.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeec
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEA 91 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEa 91 (224)
--++|+|.|..|..+|.+|.+.+ .+|++.+.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G-akVvv~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG-AKLVVTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEEcC
Confidence 45899999999999999999997 79998874
No 436
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=69.68 E-value=6.2 Score=32.85 Aligned_cols=36 Identities=11% Similarity=0.164 Sum_probs=24.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~~ 95 (224)
-..+|||+|..++.-+..+......+|++++++...
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~ 182 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL 182 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccccc
Confidence 357888888665544444444445889999988653
No 437
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=69.64 E-value=4.8 Score=33.36 Aligned_cols=32 Identities=31% Similarity=0.397 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||+|..|..+|..|.+.+ .+|.+..+-.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g-~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG-LEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCC-CEEEEEECCH
Confidence 7999999999999999999987 5899887653
No 438
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=69.37 E-value=4.9 Score=32.87 Aligned_cols=32 Identities=9% Similarity=0.224 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC----eEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNW----KVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~----~VLlLEaG~ 93 (224)
-+.|||.|.-|..+|..|.+.+ . +|.+.++.+
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g-~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKN-IVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-SSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhCC-CCCCCeEEEEeCCH
Confidence 3789999999999999999986 5 899988764
No 439
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=69.30 E-value=5.3 Score=29.41 Aligned_cols=31 Identities=26% Similarity=0.527 Sum_probs=24.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEE-Eee
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVL-LLE 90 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VL-lLE 90 (224)
-.++|||+|..|..++..|.++++++|. +++
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d 36 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQGKEFHPIAFID 36 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCcEEEEEEE
Confidence 4689999999999999999886556644 444
No 440
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=69.28 E-value=5.1 Score=33.34 Aligned_cols=30 Identities=23% Similarity=0.457 Sum_probs=25.3
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++|.|+ |.-|..++.+|.+.+ .+|.++.+.
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (315)
T 2ydy_A 5 VLVTGATGLLGRAVHKEFQQNN-WHAVGCGFR 35 (315)
T ss_dssp EEEETTTSHHHHHHHHHHHTTT-CEEEEEC--
T ss_pred EEEECCCcHHHHHHHHHHHhCC-CeEEEEccC
Confidence 788987 999999999999987 899988754
No 441
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=69.25 E-value=5.9 Score=33.50 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=28.9
Q ss_pred ccEEEEC-CChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVG-GGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
--++|.| +|.-|..++.+|.+++ .+|.++.+...
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 60 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFST 60 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSS
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCC
Confidence 3588999 5999999999999987 89999988543
No 442
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=69.25 E-value=5.4 Score=34.23 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||.|.-|..+|.+|++.+..+|.+.++-+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 489999999999999999998536899988764
No 443
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=69.17 E-value=4.7 Score=36.69 Aligned_cols=36 Identities=14% Similarity=0.270 Sum_probs=31.6
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
...-++|||+|..|+.+|..|+..|--++.|++...
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 467899999999999999999998866899998764
No 444
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=69.10 E-value=5.4 Score=33.97 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--++|+|+|-+|..+|..|++.+-.+|.++.+-.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4589999999999999999998744798886653
No 445
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=69.07 E-value=3.9 Score=35.87 Aligned_cols=36 Identities=17% Similarity=0.128 Sum_probs=31.2
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
...-++|||.|..|+.+|..|+..|-.++.|++-..
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 357899999999999999999998855899998664
No 446
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=69.02 E-value=5.7 Score=31.75 Aligned_cols=30 Identities=20% Similarity=0.230 Sum_probs=25.9
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++|.|+ |.-|..+|.+|++.+ .+|.++.+.
T Consensus 10 vlVTGasggiG~~~a~~l~~~G-~~V~~~~r~ 40 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHASG-AKVVAVTRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHCC-CEEEEEeCC
Confidence 788886 788999999999987 899998764
No 447
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=69.02 E-value=6.5 Score=32.39 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=27.5
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
++|.|+ |.-|..++.+|.+.+..+|.++.+...
T Consensus 2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 35 (310)
T 1eq2_A 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 35 (310)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS
T ss_pred EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC
Confidence 678887 999999999999986478888877643
No 448
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=68.87 E-value=5.2 Score=35.35 Aligned_cols=33 Identities=27% Similarity=0.310 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--++|||+|..|..+|.+|...+ .+|.+.++-+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~G-a~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMG-ATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCH
Confidence 46899999999999999999887 6999988654
No 449
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=68.81 E-value=5.4 Score=32.63 Aligned_cols=32 Identities=13% Similarity=0.335 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||.|..|..+|..|.+.+ .+|.+.++-+
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTP-HELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSS-CEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCC-CeEEEECCCH
Confidence 4789999999999999999987 6898887653
No 450
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=68.76 E-value=5.3 Score=32.49 Aligned_cols=32 Identities=22% Similarity=0.416 Sum_probs=26.0
Q ss_pred cEEEECCC-hHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGG-SAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG-~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|.|++ --|..+|.+|++.+ .+|.++.+-.
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~G-~~V~~~~r~~ 43 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKGG-AKVVIVDRDK 43 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred EEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCH
Confidence 37888865 45999999999997 8999987653
No 451
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=68.65 E-value=5.3 Score=34.98 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--++|+|+|.+|..+|..|...+ .+|.++++-+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G-a~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG-AQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CEEEEEeCCH
Confidence 46899999999999999999987 5999998754
No 452
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=68.64 E-value=5.3 Score=33.71 Aligned_cols=32 Identities=16% Similarity=0.404 Sum_probs=27.7
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|.|+ |.-|..+|.+|.+.+ .+|.++.+..
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~~ 54 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQG-HEILVIDNFA 54 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGGT-CEEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCC
Confidence 4888986 999999999999987 8999988743
No 453
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=68.61 E-value=4.6 Score=35.08 Aligned_cols=28 Identities=21% Similarity=0.497 Sum_probs=23.3
Q ss_pred cEEEECCChHH-----HHHHHHHhcCCCCeEEEe
Q psy7388 61 DFIVVGGGSAG-----NVVANRLSENPNWKVLLL 89 (224)
Q Consensus 61 D~IVVGsG~aG-----~v~A~rLae~~~~~VLlL 89 (224)
-+||.|||++| ..+|..|.+.+ .+|+++
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g-~~V~~v 36 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARG-YAVHWL 36 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTT-CEEEEE
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCC-CEEEEE
Confidence 37899999997 56889998886 789876
No 454
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=68.41 E-value=6.2 Score=33.87 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=28.2
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.|+ |.-|..++.+|.+.+ .+|.++.+...
T Consensus 30 ~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r~~~ 63 (381)
T 1n7h_A 30 IALITGITGQDGSYLTEFLLGKG-YEVHGLIRRSS 63 (381)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCS
T ss_pred eEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCCc
Confidence 3889997 999999999999987 89999877643
No 455
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=68.34 E-value=5.7 Score=33.20 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=26.9
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
-++|.|+ |.-|..++.+|.+.+ .+|.++.+.
T Consensus 13 ~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 44 (342)
T 1y1p_A 13 LVLVTGANGFVASHVVEQLLEHG-YKVRGTARS 44 (342)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 3889987 999999999999987 799988764
No 456
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=68.28 E-value=5.3 Score=34.82 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC-eEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~~ 94 (224)
--+.|||+|..|..+|..|+..+ . .|.|++.-+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~-~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKE-LGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-CCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-CCeEEEEeCCch
Confidence 35899999999999999999986 5 8999987653
No 457
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=68.23 E-value=5.8 Score=32.39 Aligned_cols=30 Identities=23% Similarity=0.307 Sum_probs=25.2
Q ss_pred EEEECC-Ch--HHHHHHHHHhcCCCCeEEEeecC
Q psy7388 62 FIVVGG-GS--AGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 62 ~IVVGs-G~--aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++|.|+ |. -|..+|.+|++.+ .+|+++.+.
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~G-~~V~~~~r~ 42 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEAG-ARLIFTYAG 42 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTT-CEEEEEESS
T ss_pred EEEEcCCCCCcHHHHHHHHHHHCC-CEEEEecCc
Confidence 788886 45 7999999999997 899998654
No 458
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=67.98 E-value=5.1 Score=36.44 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.+.|||.|.-|+.+|..|++ + .+|.+++.-+
T Consensus 38 kIaVIGlG~mG~~lA~~La~-G-~~V~~~D~~~ 68 (432)
T 3pid_A 38 KITISGTGYVGLSNGVLIAQ-N-HEVVALDIVQ 68 (432)
T ss_dssp EEEEECCSHHHHHHHHHHHT-T-SEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHc-C-CeEEEEecCH
Confidence 58899999999999999998 6 8999998764
No 459
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=67.97 E-value=4.9 Score=39.12 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--+-|||+|..|+-+|..++..+ ..|+|+|.-+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG-~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVG-ISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT-CEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCC-CchhcccchH
Confidence 35789999999999999999987 9999998765
No 460
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=67.92 E-value=5.2 Score=35.77 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.--++|||+|..|..+|..|...| .+|.+.+.-+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHH
Confidence 356899999999999999998887 69999987653
No 461
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=67.89 E-value=6.6 Score=32.87 Aligned_cols=32 Identities=28% Similarity=0.536 Sum_probs=27.1
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|.|+ |.-|..++.+|.+.++.+|.++.+..
T Consensus 3 vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 35 (345)
T 2bll_A 3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGS 35 (345)
T ss_dssp EEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred EEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 688887 99999999999997448999987754
No 462
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=67.71 E-value=5.4 Score=35.14 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
.-.+.|||.|.-|..+|.+|++.+ .+|.+.++-+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG-HECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCC-CEEEEEeCCH
Confidence 356899999999999999999987 8999998754
No 463
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=67.69 E-value=3.6 Score=37.41 Aligned_cols=33 Identities=12% Similarity=0.294 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCC-CCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENP-NWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~-~~~VLlLEaG~ 93 (224)
.+.|||.|.-|..+|..|++.+ +.+|.++++-+
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4889999999999999999973 37899997653
No 464
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=67.68 E-value=5.3 Score=36.11 Aligned_cols=35 Identities=17% Similarity=0.084 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.--++|||+|..|..+|..|...+ .+|.+.+.-+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHH
Confidence 457999999999999999999887 79999987653
No 465
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=67.65 E-value=4.3 Score=34.85 Aligned_cols=32 Identities=22% Similarity=0.266 Sum_probs=27.1
Q ss_pred EEEECCChHHHHHHHHHhcCCCC-eEEEeecCC
Q psy7388 62 FIVVGGGSAGNVVANRLSENPNW-KVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~ 93 (224)
+.|||+|..|..+|..|++++.. .|.|++.-+
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 67999999999999999997632 789988754
No 466
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=67.60 E-value=5.8 Score=31.60 Aligned_cols=33 Identities=24% Similarity=0.429 Sum_probs=28.0
Q ss_pred cEEEEC-CChHHHHHHHHHhcCCCC--eEEEeecCCC
Q psy7388 61 DFIVVG-GGSAGNVVANRLSENPNW--KVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVG-sG~aG~v~A~rLae~~~~--~VLlLEaG~~ 94 (224)
-++|.| +|.-|..+|.+|++.+ . +|.++.+.+.
T Consensus 20 ~vlVtGasg~iG~~l~~~L~~~G-~~~~V~~~~r~~~ 55 (242)
T 2bka_A 20 SVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKL 55 (242)
T ss_dssp EEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCC
T ss_pred eEEEECCCcHHHHHHHHHHHcCC-CCCEEEEEEcCCC
Confidence 378898 6999999999999987 6 8999987653
No 467
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=67.57 E-value=6 Score=32.89 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=25.8
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++|.|+ |.-|..++.+|.+.+ .+|.++.+.
T Consensus 3 vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~ 33 (311)
T 2p5y_A 3 VLVTGGAGFIGSHIVEDLLARG-LEVAVLDNL 33 (311)
T ss_dssp EEEETTTSHHHHHHHHHHHTTT-CEEEEECCC
T ss_pred EEEEeCCcHHHHHHHHHHHHCC-CEEEEEECC
Confidence 678885 999999999999987 899998763
No 468
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=67.49 E-value=6.8 Score=32.83 Aligned_cols=33 Identities=18% Similarity=0.381 Sum_probs=28.4
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.|+ |.-|..++.+|.+.+ .+|.++.+.+.
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 48 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAG-HDLVLIHRPSS 48 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEECTTS
T ss_pred EEEEECCCcHHHHHHHHHHHHCC-CEEEEEecChH
Confidence 3889994 999999999999987 89999987653
No 469
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=67.48 E-value=6.2 Score=33.01 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|||+|-+|..++..|.+.+-.+|.+..+-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 799999999999999999998734899887754
No 470
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=67.42 E-value=5.6 Score=34.53 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC-eEEEeecCCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNW-KVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~~ 94 (224)
-+.|||+|..|..+|..|+..+ . .|.|++.-+.
T Consensus 7 kI~iiGaG~vG~~~a~~l~~~~-~~~v~l~Di~~~ 40 (321)
T 3p7m_A 7 KITLVGAGNIGGTLAHLALIKQ-LGDVVLFDIAQG 40 (321)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CCEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCC-CceEEEEeCChH
Confidence 4789999999999999999876 5 8999987653
No 471
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=67.36 E-value=4.4 Score=35.37 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=26.9
Q ss_pred cEEEECCChHHHHHHHHHhcCCCC-eEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNW-KVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG 92 (224)
-+.|||+|..|..+|..|++.+-. .|.|++.-
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 488999999999999999987632 78888863
No 472
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=67.36 E-value=6.1 Score=32.88 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=27.1
Q ss_pred EEEEC-CChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 62 FIVVG-GGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 62 ~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++|.| +|.-|..++.+|.+++ .+|.++.+.
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 35 (311)
T 3m2p_A 5 IAVTGGTGFLGQYVVESIKNDG-NTPIILTRS 35 (311)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred EEEECCCcHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 78898 6999999999999987 799999887
No 473
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=67.36 E-value=4.4 Score=34.87 Aligned_cols=33 Identities=27% Similarity=0.444 Sum_probs=27.8
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCC--eEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNW--KVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~--~VLlLEaG~ 93 (224)
.-+.|||+|..|..+|..|+..+ . .|.|++.-.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g-~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKG-IADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT-CCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEcCCc
Confidence 45899999999999999999876 5 799998754
No 474
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=67.28 E-value=6 Score=33.43 Aligned_cols=32 Identities=19% Similarity=0.374 Sum_probs=27.8
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|.|+ |.-|..++.+|.+.+ .+|.++.+..
T Consensus 29 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~ 61 (343)
T 2b69_A 29 RILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFF 61 (343)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCS
T ss_pred EEEEEcCccHHHHHHHHHHHHCC-CEEEEEeCCC
Confidence 4889997 999999999999987 8999997753
No 475
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=67.15 E-value=4.9 Score=33.27 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=27.5
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|+|+ |.-|..++.+|.+.+ .+|.++-+..
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~ 38 (308)
T 1qyc_A 7 ILLIGATGYIGRHVAKASLDLG-HPTFLLVRES 38 (308)
T ss_dssp EEEESTTSTTHHHHHHHHHHTT-CCEEEECCCC
T ss_pred EEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCc
Confidence 899996 999999999999987 7899887764
No 476
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=67.12 E-value=5.2 Score=36.34 Aligned_cols=31 Identities=16% Similarity=0.228 Sum_probs=27.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
-++|+|+|..|..+|.+|++.+ .+|.++.+-
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G-~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSG-IKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTT-CEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCc-CEEEEEECC
Confidence 3789999999999999999876 789888764
No 477
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=67.00 E-value=5.7 Score=36.64 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=30.7
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
....+-|||.|.-|..+|..|++++ .+|.+.++-+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G-~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHG-FTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 3567999999999999999999987 7999987754
No 478
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=66.90 E-value=5.5 Score=36.21 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
--++|||+|..|...|..|.+.+ .+|.|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG-ARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCc-CEEEEEcCC
Confidence 34899999999999999999987 899999853
No 479
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=66.90 E-value=5.4 Score=36.37 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-.+.|||.|.-|..+|..|++++ .+|.+.++-+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G-~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRG-YTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT-CCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCC-CEEEEEcCCH
Confidence 46899999999999999999987 7899987753
No 480
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=66.87 E-value=6.3 Score=32.53 Aligned_cols=31 Identities=13% Similarity=-0.011 Sum_probs=26.7
Q ss_pred EEEECC---ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGG---GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGs---G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|.|+ |--|..+|.+|++.+ .+|.++.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G-~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQG-ATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTT-CEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 788996 588999999999987 8999987654
No 481
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=66.70 E-value=6.7 Score=34.09 Aligned_cols=33 Identities=9% Similarity=0.210 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
--++|+|+|-+|..+|..|++.+-.+|.|+-+-
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 358999999999999999999874489998775
No 482
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=66.56 E-value=4.1 Score=39.32 Aligned_cols=32 Identities=19% Similarity=0.284 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+-|||+|.-|..+|..|+..+ .+|.+.++-+
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG-~~V~l~D~~~ 347 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKG-TPILMKDINE 347 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTT-CCEEEECSSH
T ss_pred EEEEECCChhhHHHHHHHHhCC-CEEEEEECCH
Confidence 4889999999999999999987 8999998754
No 483
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=66.54 E-value=6.1 Score=32.70 Aligned_cols=34 Identities=32% Similarity=0.513 Sum_probs=28.4
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.|+ |.-|..++.+|.++++.+|.++-+.+.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~ 41 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR 41 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC
Confidence 3789997 999999999999876578998887653
No 484
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=66.44 E-value=6.4 Score=33.41 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=27.8
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|.|+ |.-|..++.+|.+.+ .+|.++.+..
T Consensus 29 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~ 61 (352)
T 1sb8_A 29 VWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFA 61 (352)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCS
T ss_pred eEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCC
Confidence 4889997 999999999999987 8999987754
No 485
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=66.25 E-value=5.8 Score=34.39 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||.|.-|..+|..|.+.+ .+|.+..+-+
T Consensus 18 ~I~IIG~G~mG~alA~~L~~~G-~~V~~~~~~~ 49 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKDSG-VDVTVGLRSG 49 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEECCTT
T ss_pred EEEEECchHHHHHHHHHHHHCc-CEEEEEECCh
Confidence 4899999999999999999987 7888877654
No 486
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=66.19 E-value=6 Score=34.15 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=28.6
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC-eEEEeecCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAGG 93 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG~ 93 (224)
..-+.|||+|..|..+|..|+..+.. .|.|++.-.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35799999999999999999997622 699988754
No 487
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=66.14 E-value=6.1 Score=33.76 Aligned_cols=34 Identities=21% Similarity=0.580 Sum_probs=29.0
Q ss_pred cEEEEC-CChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 61 DFIVVG-GGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 61 D~IVVG-sG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-++|.| +|.-|..++.+|.++++.+|.++.+...
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~ 60 (372)
T 3slg_A 26 KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTD 60 (372)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCT
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChh
Confidence 489999 5999999999999974489999988754
No 488
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=66.03 E-value=6 Score=36.03 Aligned_cols=33 Identities=33% Similarity=0.624 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
-.++|+|+|-.|..+|..|.+ +.+|-+||.-..
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~ 268 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQ 268 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHH
T ss_pred cEEEEEcchHHHHHHHHHhhh--cCceEEEecCHH
Confidence 369999999999999999965 379999999764
No 489
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=65.90 E-value=7.6 Score=33.04 Aligned_cols=34 Identities=15% Similarity=0.194 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
--++|+|+|-+|..+|..|.+.+-.+|.+..+-.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 3589999999999999999998734898887653
No 490
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=65.86 E-value=6.1 Score=34.88 Aligned_cols=35 Identities=17% Similarity=0.099 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCCeEEEeecCCC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~~ 94 (224)
.-.++|+|+|..|..+|..|...+ .+|.+.+.-+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G-a~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLG-AVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHH
Confidence 457899999999999999998887 68999987653
No 491
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=65.82 E-value=7 Score=33.08 Aligned_cols=33 Identities=9% Similarity=0.122 Sum_probs=27.7
Q ss_pred ccEEEECCChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 60 yD~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
--++|+|+|-+|..+|..|.+.+-.+|.+.-+-
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 358999999999999999999874488888664
No 492
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=65.63 E-value=4.8 Score=32.98 Aligned_cols=30 Identities=17% Similarity=0.469 Sum_probs=26.6
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++|.|+ |.-|..++.+|.+++ .+|.++.+-
T Consensus 8 ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 38 (287)
T 3sc6_A 8 VIITGANGQLGKQLQEELNPEE-YDIYPFDKK 38 (287)
T ss_dssp EEEESTTSHHHHHHHHHSCTTT-EEEEEECTT
T ss_pred EEEECCCCHHHHHHHHHHHhCC-CEEEEeccc
Confidence 789995 999999999999986 899999773
No 493
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=65.58 E-value=9.7 Score=35.22 Aligned_cols=36 Identities=17% Similarity=0.394 Sum_probs=30.5
Q ss_pred CcccEEEECCChHHHHHHHHHhcCCC--CeEEEeecCC
Q psy7388 58 MEYDFIVVGGGSAGNVVANRLSENPN--WKVLLLEAGG 93 (224)
Q Consensus 58 ~~yD~IVVGsG~aG~v~A~rLae~~~--~~VLlLEaG~ 93 (224)
++--++|.|+|+||..+|..|.+.|- .+|.++++-+
T Consensus 218 ~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~G 255 (487)
T 3nv9_A 218 HECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKG 255 (487)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTE
T ss_pred hhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccc
Confidence 45789999999999999999988763 4899998865
No 494
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=65.57 E-value=6.1 Score=34.65 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||.|.-|..+|..|.+.+ .+|.+.++-+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G-~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAAN-HSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT-CCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 4789999999999999999987 8999988654
No 495
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=65.55 E-value=6.3 Score=32.90 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=27.5
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
++|+|+ |.-|..++.+|.+.+ .+|.++-+.+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~ 38 (321)
T 3c1o_A 7 IIIYGGTGYIGKFMVRASLSFS-HPTFIYARPL 38 (321)
T ss_dssp EEEETTTSTTHHHHHHHHHHTT-CCEEEEECCC
T ss_pred EEEEcCCchhHHHHHHHHHhCC-CcEEEEECCc
Confidence 899995 999999999999987 8999988765
No 496
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=65.37 E-value=7.2 Score=33.10 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=28.6
Q ss_pred cEEEECC-ChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGG-GSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-++|+|+ |.-|..++.+|.+.+ .+|.++-+.+
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~ 44 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAH-RPTYILARPG 44 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSS
T ss_pred eEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCC
Confidence 4899998 999999999999987 8999998865
No 497
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=65.32 E-value=6.2 Score=35.54 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHhcCCCCeEEEeecCC
Q psy7388 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93 (224)
Q Consensus 61 D~IVVGsG~aG~v~A~rLae~~~~~VLlLEaG~ 93 (224)
-+.|||.|.+|..+|.-|.+.| .+|.+.|...
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G-~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLG-AIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTT-CEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCC-CEEEEEeCCc
Confidence 4899999999999999999987 8999999865
No 498
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=65.17 E-value=6.6 Score=34.36 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=27.9
Q ss_pred cccEEEECCChHHHHHHHHHhcCCCC-eEEEeecC
Q psy7388 59 EYDFIVVGGGSAGNVVANRLSENPNW-KVLLLEAG 92 (224)
Q Consensus 59 ~yD~IVVGsG~aG~v~A~rLae~~~~-~VLlLEaG 92 (224)
.--+.|||+|..|..+|..|+..+-. .|.|++.-
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 35689999999999999999987632 68888863
No 499
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=65.17 E-value=7.5 Score=31.07 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=25.8
Q ss_pred EEEECC-ChHHHHHHHHHhcCCCCeEEEeecC
Q psy7388 62 FIVVGG-GSAGNVVANRLSENPNWKVLLLEAG 92 (224)
Q Consensus 62 ~IVVGs-G~aG~v~A~rLae~~~~~VLlLEaG 92 (224)
++|.|+ |.-|..+|.+|++.+ .+|.++.+.
T Consensus 10 vlITGasggiG~~~a~~l~~~G-~~V~~~~r~ 40 (244)
T 3d3w_A 10 VLVTGAGKGIGRGTVQALHATG-ARVVAVSRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred EEEECCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 778886 799999999999987 799988765
No 500
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=65.17 E-value=7.9 Score=30.65 Aligned_cols=32 Identities=25% Similarity=0.445 Sum_probs=27.0
Q ss_pred EEEEC-CChHHHHHHHHHhcCC-CCeEEEeecCC
Q psy7388 62 FIVVG-GGSAGNVVANRLSENP-NWKVLLLEAGG 93 (224)
Q Consensus 62 ~IVVG-sG~aG~v~A~rLae~~-~~~VLlLEaG~ 93 (224)
++|.| +|.-|..++.+|.+.+ +.+|.++.+.+
T Consensus 7 ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~ 40 (253)
T 1xq6_A 7 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA 40 (253)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCH
T ss_pred EEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 78888 6999999999999984 48999987753
Done!