RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7388
(224 letters)
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 139 bits (351), Expect = 3e-40
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 44 YDPETQIFDQKKLLM--------EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE 95
Y P QI Q LL YD+I+ GGG G VA +L+ENP KVL++E G +E
Sbjct: 1 YLPAQQIDVQSSLLSDPSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60
Query: 96 TE---ITDVPVLSLYLHKSRFDWKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTML 152
+ I + P + + D Y T P + ++ GK +GGS+++N
Sbjct: 61 SNDGAIIEDPNAYGQIFGTTVDQNYLTVPL------INNRTNNIKAGKGLGGSTLINGDS 114
Query: 153 YVRGNRRDFDQWAAD-GNEGWSYEEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSP 211
+ R ++ D W G EGW+++ + Y KK+ R P A++ H+ +
Sbjct: 115 WTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGT 174
Query: 212 WNTP 215
+
Sbjct: 175 VQSG 178
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 121 bits (303), Expect = 3e-33
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETE---ITDVPVLSLYLHKSRFDW 115
D+I+ GGG G A RL+ENPN VL++E+G +E++ I + + S D
Sbjct: 17 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDH 76
Query: 116 KYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGN-EGWSY 174
Y T A ++ + G +GGS+++N + R ++ D W EGW++
Sbjct: 77 AYETVE-----LATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNW 131
Query: 175 EEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPWN 213
+ V Y ++ R P +I H + +
Sbjct: 132 DNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVH 170
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 113 bits (283), Expect = 2e-30
Identities = 18/158 (11%), Positives = 35/158 (22%), Gaps = 13/158 (8%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKY 117
++YD ++VG G G A L +KV + + G ++ + + + K+
Sbjct: 3 IKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKF 61
Query: 118 RTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGN--------RRDFDQWAADGN 169
+ + N G
Sbjct: 62 VNVIQGQLMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGG 121
Query: 170 EGWSYEEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTV 207
+ P F + D A
Sbjct: 122 MSTHWTCATPRFDREQRPLLVK----DDADADDAEWDR 155
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 112 bits (281), Expect = 3e-30
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 18/151 (11%)
Query: 37 LYFRYDLYDPETQIFDQKKLLMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHET 96
L F YD D E L YD+++VGGG++G +A LSE +KVL+LE G T
Sbjct: 12 LSFAYDATDLE--------LEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPT 61
Query: 97 EITDVPVLSLYLHKSRFDWKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRG 156
+V +++ + + +T + + + RG+V+GG+S++N +Y R
Sbjct: 62 AYPNVLTADGFVYNLQQEDDGKTPV----ERFVSEDGIDNVRGRVLGGTSIINAGVYARA 117
Query: 157 NRRDFDQWAADGNEGWSYEEVLPYFKKSMDQ 187
N + D W + V ++ D
Sbjct: 118 NTSIYSASGVD----WDMDLVNQTYEWVEDT 144
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 101 bits (251), Expect = 6e-26
Identities = 24/185 (12%), Positives = 48/185 (25%), Gaps = 24/185 (12%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVP---------------- 102
+V+G G G V A RL++ ++E G
Sbjct: 7 RVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWL 65
Query: 103 ---VLSLYLHKSRFDWKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRR 159
+ F + + +G+ +GG S++N + V R
Sbjct: 66 ADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRN 125
Query: 160 DFDQWAADGNEGWSYEEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPWNTPLGFR 219
F++ + Y + P + N + + + + T
Sbjct: 126 YFEEILPSVDSNEMYNKYFPRANTGLGVNNID----QAWFESTEWYKFARTGRKTAQRSG 181
Query: 220 CGCMF 224
F
Sbjct: 182 FTTAF 186
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 82.3 bits (202), Expect = 4e-19
Identities = 27/177 (15%), Positives = 45/177 (25%), Gaps = 34/177 (19%)
Query: 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVP--VLSLYLHKSRFDWKY 117
+V+G G V A RL E + L+LE G + + R W
Sbjct: 3 VPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFK 61
Query: 118 RT------------------QPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRR 159
P + + G+ +GG S++N + V R
Sbjct: 62 NRTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRS 121
Query: 160 DFDQWAADGNEGWSYEEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPWNTPL 216
F++ S E YF ++ +
Sbjct: 122 YFEEI---LPRVDSSEMYDRYFPRAN----------SMLRVNHIDTKWFEDTEWYKF 165
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 82.4 bits (202), Expect = 4e-19
Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 15/170 (8%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPV-----LSLYLHKSRF 113
YD+I+VG G G + A+RLSE KVLLLE GG T+ T S L K
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSEAGK-KVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI 60
Query: 114 DWKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWS 173
+ + T + K G ++GG + +N LY N DF S
Sbjct: 61 PGLFESLF-TDSNPFWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSS---VGWPSS 116
Query: 174 YEEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPWNTPLGFRCGCM 223
+ PY K + + +T G ++ S +
Sbjct: 117 WTNHAPYTSKLSSRLPST-----DHPSTDGQRYLEQSFNVVSQLLKGQGY 161
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 45.6 bits (107), Expect = 1e-06
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
E D +VVG GSAG A +S+NPN +V ++E
Sbjct: 32 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS 66
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 44.1 bits (102), Expect = 6e-06
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94
EYD IV+G G +++ +S N KVL ++ +
Sbjct: 6 EYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPY 40
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 42.9 bits (99), Expect = 1e-05
Identities = 28/170 (16%), Positives = 53/170 (31%), Gaps = 11/170 (6%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA----GGHETEITDVPVLSLYLHKSRFD 114
+YD IV+G G +++ LS + KVL ++ GG +T + +F
Sbjct: 5 DYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGEAASVTLSQL------YEKFK 57
Query: 115 WKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSY 174
++ + V K + + L +L R D G+ +
Sbjct: 58 QNPISKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQ 117
Query: 175 EEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPWNTPLGFRCGCMF 224
++ ++ + L I +L S L G
Sbjct: 118 GKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDL 167
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 42.9 bits (100), Expect = 1e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Query: 58 MEYDFIVVGGGSAGNVVANRLS-----ENPNWKVLLLEAGGH 94
E D ++VG G AG A RL + +V L+E H
Sbjct: 31 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 72
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 41.6 bits (96), Expect = 3e-05
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
M YD IV+GGG +G + A +E VLLL+ G
Sbjct: 1 MHYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKG 34
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 41.7 bits (97), Expect = 3e-05
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94
YD+I+VG G G V AN L + N KVL++E H
Sbjct: 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNH 35
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 41.2 bits (95), Expect = 3e-05
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEA---GGHETEITDVPVLSLYLHKSRFDWK 116
YD IV+GGGS G A R + + N KV L+E GG + VP ++ S D
Sbjct: 2 YDLIVIGGGSGGMAAARRAARH-NAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDIL 60
Query: 117 YRTQPGTTACQAMKDKRCVWTR 138
++ + + + R
Sbjct: 61 ENSRHYGFDTKFSFNLPLLVER 82
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 40.4 bits (93), Expect = 7e-05
Identities = 23/168 (13%), Positives = 41/168 (24%), Gaps = 15/168 (8%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKY 117
++ +++GGG G V A R + +L+E + L+ K
Sbjct: 4 IQTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEGQ---------ALGGTCLNIGCIPSKA 53
Query: 118 RTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEV 177
QA R I +S + + G +
Sbjct: 54 LIHVAEQFHQAS---RFTEPSPLGISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHG 110
Query: 178 LPYFKKSMDQRNPYLAKID--RYHATGGYLTVQDSPWNTPLGFRCGCM 223
+ + ++D R L S P R
Sbjct: 111 VKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGSSSVELPRRPRTKGF 158
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 40.3 bits (93), Expect = 7e-05
Identities = 28/159 (17%), Positives = 46/159 (28%), Gaps = 6/159 (3%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA----GGHETEITDVPVLSLYLHKSRFD 114
EYD +V+GGG G A ++ KV ++E GG + +P +L H +
Sbjct: 6 EYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTLGGVCLNVGCIPSKALL-HNAAVI 63
Query: 115 WKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSY 174
+ R + R G S L L R D DG +
Sbjct: 64 DEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPH 123
Query: 175 EEVLPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPWN 213
+ ++ + + N
Sbjct: 124 HLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRAPN 162
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 39.9 bits (92), Expect = 9e-05
Identities = 23/168 (13%), Positives = 52/168 (30%), Gaps = 10/168 (5%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH------ETEITDVPVLSLYLHKSR 112
+D +++GGG AG V A + ++ + +E G L H
Sbjct: 5 SHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFH 63
Query: 113 FDWKYRTQPGTTACQAMKDKRCVWTRGK--VIGGSSVLNTMLYVRGNRRDFDQWAADGNE 170
+ G +K + + K + + +L+ + + + +E
Sbjct: 64 QMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDE 123
Query: 171 GWSYEEVLPYFKKSMDQRNPYLAK-IDRYHATGGYLTVQDSPWNTPLG 217
+ + ++ + + K I + V P+ LG
Sbjct: 124 TKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFVGRRPYIAGLG 171
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 39.8 bits (92), Expect = 1e-04
Identities = 21/155 (13%), Positives = 40/155 (25%), Gaps = 10/155 (6%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKY 117
+E + +VVG G G V A R ++ KV ++E G ++ + L +
Sbjct: 2 IETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG-------NLGGVCLNVGCIPSKALI 53
Query: 118 RTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEV 177
+ ++ + V+ + E
Sbjct: 54 SASHRYEQAKHSEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGE- 112
Query: 178 LPYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPW 212
YF + R Y + P
Sbjct: 113 -AYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPI 146
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 39.9 bits (92), Expect = 1e-04
Identities = 11/82 (13%), Positives = 23/82 (28%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYR 118
YD +V+G GS G + +V +++ H + ++ K
Sbjct: 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLM 62
Query: 119 TQPGTTACQAMKDKRCVWTRGK 140
+ W +
Sbjct: 63 VTGANYMDTIRESAGFGWELDR 84
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 38.7 bits (89), Expect = 2e-04
Identities = 19/121 (15%), Positives = 43/121 (35%), Gaps = 6/121 (4%)
Query: 57 LMEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEA---GGHETEITDVPVLSLYLHKSRF 113
+ YD++V+GGGS G A R +E + ++E+ GG + VP ++
Sbjct: 1 VASYDYLVIGGGSGGLASARRAAEL-GARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHS 59
Query: 114 DWKYRT--QPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEG 171
++ + + + R + + + + + AA ++
Sbjct: 60 EFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDP 119
Query: 172 W 172
Sbjct: 120 K 120
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide
dehydrogenase {Garden pea (Pisum sativum) [TaxId:
3888]}
Length = 221
Score = 38.7 bits (89), Expect = 2e-04
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94
E D +++GGG G V A + ++ +K +E G
Sbjct: 3 ENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGA 37
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 37.6 bits (86), Expect = 5e-04
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
YD+I +GGGS G NR + K L+EA
Sbjct: 2 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAK 34
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 37.7 bits (86), Expect = 5e-04
Identities = 9/63 (14%), Positives = 20/63 (31%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYR 118
+D +V+G GS G A + +V +++ + ++ K
Sbjct: 3 IFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLM 62
Query: 119 TQP 121
Sbjct: 63 VTG 65
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 37.3 bits (85), Expect = 6e-04
Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 2/83 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYR 118
++D IV+G G G V A + ++ K L+E E +
Sbjct: 3 KFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEK-YKGKEGKTALGGTCLNVGCIPSKALL 60
Query: 119 TQPGTTACQAMKDKRCVWTRGKV 141
K + G+V
Sbjct: 61 DSSYKFHEAHESFKLHGISTGEV 83
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 37.3 bits (85), Expect = 8e-04
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGG 93
D +VVG G AG A +++ KV+L+E
Sbjct: 16 TVDVVVVGSGGAGFSAAISATDS-GAKVILIEKEP 49
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 37.3 bits (85), Expect = 9e-04
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 37 LYF--RYDLYDPETQIFDQKKLLMEYDFIVVGGGSAGNVVANRLSE---NPNWKVLLLEA 91
+Y+ +Y+LY + + ++E D +++GGG +G A + KV L+E
Sbjct: 1 VYYPKKYELYKAD----EVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEK 56
Query: 92 G 92
Sbjct: 57 A 57
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 37.0 bits (84), Expect = 0.001
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
+D IVVG GS G +L++ K LL++A
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAF 35
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 36.6 bits (83), Expect = 0.001
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
++D I++GGGS G A ++ + KV++L+
Sbjct: 3 DFDLIIIGGGSGGLAAAKEAAKF-DKKVMVLDFV 35
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 36.4 bits (83), Expect = 0.001
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94
+ I++G G+AG A +L++ V + + G
Sbjct: 5 SENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKK 38
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 36.7 bits (83), Expect = 0.001
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
Y+ +V+GGG G+ +A L++ N L E+G
Sbjct: 4 HYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESG 36
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 36.4 bits (83), Expect = 0.002
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
D +++G G+AG +A RL++ +V++L G
Sbjct: 6 HSCDVLIIGSGAAGLSLALRLADQH--QVIVLSKG 38
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 36.1 bits (82), Expect = 0.002
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSE-NPNWKVLLLEAG 92
+ D +VG G AG A ++ NPN K+ L+
Sbjct: 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKV 39
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 35.5 bits (81), Expect = 0.003
Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94
++VG G +G V+ +L+E +V +++ H
Sbjct: 5 ILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDH 36
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 35.7 bits (81), Expect = 0.003
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94
EYD I +GGG+AG + L + L+++
Sbjct: 42 EYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWPF 76
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 35.3 bits (80), Expect = 0.004
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
D +++G G AG A + KV+LLE
Sbjct: 23 TTDVVIIGSGGAGLAAAVSARDA-GAKVILLEKE 55
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 35.3 bits (79), Expect = 0.004
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEA----GGH 94
IVVG G +G A RLSE +L+LEA GG
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGR 39
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 35.1 bits (79), Expect = 0.005
Identities = 20/155 (12%), Positives = 44/155 (28%), Gaps = 13/155 (8%)
Query: 63 IVVGGGSAGNVVANRLSENPNWKVLLLEA----GGHETEITDVPVLSLYLHKSRFDWKYR 118
++VG G AG A L+ +V +LEA GG V + ++ +
Sbjct: 34 VIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPGGR--------VRTYRNEEAGWYANLG 84
Query: 119 TQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEVL 178
+ +++ + N +++ R+ + D +
Sbjct: 85 PMRLPEKHRIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPS 144
Query: 179 PYFKKSMDQRNPYLAKIDRYHATGGYLTVQDSPWN 213
K + L K+ + +
Sbjct: 145 EAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDT 179
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 35.0 bits (79), Expect = 0.005
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
+VVG GSAG + + V+L++
Sbjct: 19 TTQVLVVGAGSAGFNASLAAKKA-GANVILVDKA 51
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 311
Score = 34.9 bits (79), Expect = 0.006
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSE-NPNWKVLLLEAG 92
D I+VG GS+G A +++ P+ KV ++E+
Sbjct: 49 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 84
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 34.7 bits (78), Expect = 0.006
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEA----GGH 94
D +VVGGG +G A L ++ V++LEA GG
Sbjct: 1 DVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVGGR 37
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 34.7 bits (78), Expect = 0.007
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
D +V+GGG AG A + ++L
Sbjct: 4 QYCDSLVIGGGLAGLRAAVATQQK-GLSTIVLSLI 37
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 34.1 bits (77), Expect = 0.009
Identities = 8/49 (16%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSL 106
M+ ++G G +G ++ L + ++LE + + + L
Sbjct: 1 MKTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTPDYVLGRIRAGVL 48
>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase
(RmlD) {Salmonella enterica serovar typhimurium [TaxId:
90371]}
Length = 298
Score = 34.1 bits (76), Expect = 0.010
Identities = 16/163 (9%), Positives = 40/163 (24%), Gaps = 1/163 (0%)
Query: 63 IVVGG-GSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYRTQP 121
++ G G G + L+ N L + + + ++ ++ + K R D
Sbjct: 4 LLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAA 63
Query: 122 GTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEVLPYF 181
T +A + + + G ++E
Sbjct: 64 HTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATS 123
Query: 182 KKSMDQRNPYLAKIDRYHATGGYLTVQDSPWNTPLGFRCGCMF 224
++ + + +L + S G
Sbjct: 124 PLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTM 166
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 34.1 bits (77), Expect = 0.010
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLE 90
E+D +V+G G AG A ++S++ LL
Sbjct: 6 REFDAVVIGAGGAGMRAALQISQS-GQTCALLS 37
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 34.0 bits (76), Expect = 0.012
Identities = 7/33 (21%), Positives = 15/33 (45%)
Query: 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
+++G G G +A+ L + +L+ G
Sbjct: 2 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 33.6 bits (75), Expect = 0.014
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEA----GGH 94
+ VVGGG +G VA+ L +LLE+ GG
Sbjct: 2 NVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLGGA 38
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 32.4 bits (72), Expect = 0.038
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEA 91
D ++ G G G A L + KV LLE+
Sbjct: 3 DILIAGAGIGGLSCALALHQAGIGKVTLLES 33
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 31.7 bits (70), Expect = 0.057
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 63 IVVGGGSAGNVVANRLSENPNWKVLLLEA----GGH 94
V+G G +G A +L + V + EA GG
Sbjct: 5 AVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAGGK 39
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 31.8 bits (70), Expect = 0.059
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Query: 63 IVVGGGSAGNVVANRLSENPNWKVLLLEA----GGH 94
I++G G +G A +L V LLEA GG
Sbjct: 9 IIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGR 43
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 30.3 bits (67), Expect = 0.091
Identities = 14/118 (11%), Positives = 30/118 (25%), Gaps = 14/118 (11%)
Query: 62 FIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYRTQP 121
F V+G G G + L GHE D+ + + S
Sbjct: 3 FAVIGLGRFGGSIVKELHRM-----------GHEVLAVDINEEKVNAYASYATHAVIANA 51
Query: 122 GTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDF-DQWAADGNEGWSYEEVL 178
T + ++ + + ++ + + + +VL
Sbjct: 52 --TEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVL 107
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 30.5 bits (67), Expect = 0.14
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 60 YDFIVVGGGSAGNVVANRLSE----NPNWKVLLLEA 91
D ++VG G AG + A LSE P+ KV +++
Sbjct: 8 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDK 43
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 29.3 bits (64), Expect = 0.29
Identities = 19/144 (13%), Positives = 34/144 (23%), Gaps = 2/144 (1%)
Query: 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYRT 119
YD ++VG G AG A + + L+ + V + + K
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARK-GIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAG 60
Query: 120 QPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGWSYEEVLP 179
+ D + K+I + + + G
Sbjct: 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKLPNTNW 120
Query: 180 YFKKSMDQRNPYLAKIDRYHATGG 203
R + ID T
Sbjct: 121 LEGAVERNRMGEI-IIDAKCETNV 143
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 29.3 bits (64), Expect = 0.33
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSE-NPNWKVLLLEAGGH 94
F+++GGG+A A + +P +VL++
Sbjct: 4 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 40
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 29.1 bits (64), Expect = 0.37
Identities = 12/107 (11%), Positives = 20/107 (18%), Gaps = 4/107 (3%)
Query: 63 IVVGGGSAGNVVANRLSENPNWKVLLLEAG---GHETEITDVPVLSLYLHKSRFDWKYRT 119
+V+G G G A + E VL ++ L +
Sbjct: 4 VVIGAGVIGLSTALCIHER-YHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPSNP 62
Query: 120 QPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAA 166
Q Q + + W
Sbjct: 63 QEANWNQQTFNYLLSHIGSPNAANMGLTPVSGYNLFREAVPDPYWKD 109
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 28.8 bits (64), Expect = 0.44
Identities = 15/91 (16%), Positives = 25/91 (27%), Gaps = 19/91 (20%)
Query: 60 YDFIVVGGGSAGNVVANRLSENPNWKVLLLE------------------AGGHETEITDV 101
Y ++VG G +G A L++ +V LL G D
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDP 61
Query: 102 PVLSLYLHKSRFDWKYRTQPGTTACQAMKDK 132
++ +R + QA
Sbjct: 62 KDERVWAFHARAKYLLEGLRPLHLFQATATG 92
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 28.9 bits (63), Expect = 0.46
Identities = 13/114 (11%), Positives = 31/114 (27%), Gaps = 4/114 (3%)
Query: 63 IVVGGGSAGNVVANRLSEN--PNWKVLLLEAG--GHETEITDVPVLSLYLHKSRFDWKYR 118
+++GGG AG A + + +V +++ G + D ++ + + R
Sbjct: 5 VILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELR 64
Query: 119 TQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGW 172
P D + + + + G
Sbjct: 65 RAPHLGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGEL 118
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex,
C-terminal domain {Thermus aquaticus [TaxId: 271]}
Length = 126
Score = 27.9 bits (62), Expect = 0.48
Identities = 6/49 (12%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHE---TEITDVPVL 104
++ +VG G G+ +A+ ++++ E + +
Sbjct: 3 KWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIE 51
>d3seba2 d.15.6.1 (A:122-238) Staphylococcal enterotoxin B, SEB
{Staphylococcus aureus [TaxId: 1280]}
Length = 117
Score = 27.8 bits (62), Expect = 0.57
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 39 FRYDLYDPETQIFDQKKLLMEY 60
F YD+ FDQ K LM Y
Sbjct: 75 FWYDMMPAPGDKFDQSKYLMMY 96
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 27.8 bits (60), Expect = 0.91
Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 63 IVVGGGSAGNVVANRLSENPNWKVLLLEA 91
VVGG +G A L + V + E
Sbjct: 8 AVVGGSISGLTAALMLRDA-GVDVDVYER 35
>d1bxta2 d.15.6.1 (A:120-234) Streptococcal superantigen SSA
{Streptococcus pyogenes [TaxId: 1314]}
Length = 115
Score = 27.0 bits (60), Expect = 0.92
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 39 FRYDLYDPETQIFDQKKLLMEY 60
F YD+ IFDQ K LM Y
Sbjct: 74 FWYDMMPAPGAIFDQSKYLMLY 95
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 27.7 bits (60), Expect = 1.1
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 63 IVVGGGSAGNVVANRLSENPNWKVLLLEAG 92
+V+G G G A L+ + V +L
Sbjct: 10 VVLGSGVIGLSSALILARK-GYSVHILARD 38
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 189
Score = 27.1 bits (59), Expect = 1.6
Identities = 10/71 (14%), Positives = 19/71 (26%), Gaps = 4/71 (5%)
Query: 64 VVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYRTQPGT 123
V G G+ G +A LS+ +V + E + + +
Sbjct: 12 VFGSGAFGTALAMVLSKK-CREVCVW---HMNEEEVRLVNEKRENVLFLKGVQLASNITF 67
Query: 124 TACQAMKDKRC 134
T+
Sbjct: 68 TSDVEKAYNGA 78
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 27.1 bits (59), Expect = 1.7
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 59 EYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGH 94
E D +VVG G +G RL E V ++E G
Sbjct: 7 EVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGD 41
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 26.7 bits (57), Expect = 1.8
Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Query: 63 IVVGGGSAGNVVANRLSE-NPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYRTQP 121
+VVGGG+ G A + +P+ +V L+E + K
Sbjct: 6 VVVGGGTGGATAAKYIKLADPSIEVTLIEPNTDYYTCYLSNEVIGGDRKLESIKHGYDGL 65
Query: 122 GTTACQAMKDKRCVW 136
Q + D
Sbjct: 66 RAHGIQVVHDSATGI 80
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M
oxidoreductase/carboxylase {Xanthobacter sp., py2
[TaxId: 35809]}
Length = 121
Score = 26.1 bits (56), Expect = 2.4
Identities = 15/107 (14%), Positives = 30/107 (28%), Gaps = 6/107 (5%)
Query: 50 IFDQKKLLMEYDF------IVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPV 103
+FD L+ E D+ +VVGG + V+L+ + +
Sbjct: 7 VFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETR 66
Query: 104 LSLYLHKSRFDWKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNT 150
+ + + T + + R G + T
Sbjct: 67 AYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIET 113
>d2aq2b2 d.15.6.1 (B:124-235) Streptococcal superantigen SSA
{Streptococcus pyogenes [TaxId: 1314]}
Length = 112
Score = 25.5 bits (56), Expect = 2.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 39 FRYDLYDPETQIFDQKKLLMEY 60
F YD+ FDQ K LM Y
Sbjct: 71 FWYDMMPAPGDKFDQSKYLMMY 92
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 180
Score = 26.2 bits (56), Expect = 2.8
Identities = 9/88 (10%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
Query: 64 VVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYRTQPGT 123
++G G+ G+ ++ L +N +V + + + +
Sbjct: 5 ILGAGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPE 63
Query: 124 TACQAMKDKRCVWTRGKVIGGSSVLNTM 151
+ +++ V G V++ +
Sbjct: 64 QLEKCLENAEVVLLGVSTDGVLPVMSRI 91
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 25.9 bits (55), Expect = 3.7
Identities = 21/157 (13%), Positives = 42/157 (26%), Gaps = 15/157 (9%)
Query: 61 DFIVVGGGSAGNVVANRLSENPNWKVLLLEAG--------------GHETEITDVPVLSL 106
+ ++VG G AG VA L + W+ + G + L L
Sbjct: 5 NVVIVGTGLAGVEVAFGLRAS-GWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL 63
Query: 107 YLHKSRFDWKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAA 166
+ + GT +D++ V L R + + +A
Sbjct: 64 RTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPLIPNCELASA 123
Query: 167 DGNEGWSYEEVLPYFKKSMDQRNPYLAKIDRYHATGG 203
G + + + + + S +
Sbjct: 124 AGLQVDNGIVINEHMQTSDPLIMAVGDCARFHSQLYD 160
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 26.0 bits (55), Expect = 3.8
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 63 IVVGGGSAGNVVANRLSE-NPNWKVLLLEAGGH 94
IV+G G L +P+ ++ E G
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDF 36
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 26.2 bits (56), Expect = 4.1
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 63 IVVGGGSAGNVVANRLS-ENPNWKVLLLEAG 92
++G G +G V A L E +V L E
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFERR 38
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel
Kch {Escherichia coli [TaxId: 562]}
Length = 153
Score = 25.2 bits (54), Expect = 4.9
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 62 FIVVGGGSAGNVVANRLSEN 81
FIV G +L++
Sbjct: 6 FIVCGHSILAINTILQLNQR 25
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 25.5 bits (54), Expect = 5.3
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 58 MEYDFIVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKY 117
++ +V+G G A L + ++ L+ G D P LS K
Sbjct: 2 LKAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKI 60
Query: 118 RTQ 120
R
Sbjct: 61 RLD 63
>d2f01a1 b.61.1.1 (A:14-134) Streptavidin {Streptomyces avidinii
[TaxId: 1895]}
Length = 121
Score = 24.8 bits (54), Expect = 6.1
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 134 CVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAA 166
W+ V G + +NT + + + W +
Sbjct: 77 TTWSGQYVGGAEARINTQWLLTSGTTEANAWKS 109
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 132
Score = 24.5 bits (52), Expect = 7.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 63 IVVGGGSAGNVVANRLSEN 81
I+ G G G +A LSE
Sbjct: 4 IIAGIGRVGYTLAKSLSEK 22
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 24.7 bits (52), Expect = 8.3
Identities = 11/82 (13%), Positives = 22/82 (26%), Gaps = 9/82 (10%)
Query: 63 IVVGGGSAGNVVANRLSENPNWKVLLLEAGGHETEITDVPVLSLYLHKSRFDWKYRTQPG 122
++G G A A+ L+ + + E + ++
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFEKQ---------EYVGGLSTSEIPQFRLPYDVV 58
Query: 123 TTACQAMKDKRCVWTRGKVIGG 144
+ MKD GK +
Sbjct: 59 NFEIELMKDLGVKIICGKSLSE 80
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 24.5 bits (52), Expect = 9.3
Identities = 16/135 (11%), Positives = 33/135 (24%), Gaps = 6/135 (4%)
Query: 58 ME---YDFIVVGGGSAGNVVANRLSENPNWKVLLLEAG--GHETEITDVPVLSLYLHKSR 112
+E +VG G A + A + K LL E + + +
Sbjct: 1 LETHNTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEGWMANDIAPGGQLTTTTDVENFPG 59
Query: 113 FDWKYRTQPGTTACQAMKDKRCVWTRGKVIGGSSVLNTMLYVRGNRRDFDQWAADGNEGW 172
F T + ++ + + + + + + A G
Sbjct: 60 FPEGILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGA 119
Query: 173 SYEEVLPYFKKSMDQ 187
+ P K
Sbjct: 120 VAKGHEPATKFLDGG 134
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.439
Gapped
Lambda K H
0.267 0.0665 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 895,732
Number of extensions: 41150
Number of successful extensions: 234
Number of sequences better than 10.0: 1
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 84
Length of query: 224
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 142
Effective length of database: 1,281,736
Effective search space: 182006512
Effective search space used: 182006512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.6 bits)