BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7389
(731 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 361 bits (927), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 235/638 (36%), Positives = 324/638 (50%), Gaps = 88/638 (13%)
Query: 101 DKDHKNNNREEQDGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVP 160
D + ++R + D +DFI+IG GSAG V+A+RLSE+ +WKVLL+EAG +EP A +P
Sbjct: 48 DPCGRASSRFRSEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIP 107
Query: 161 GLAPLISRSNIDWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYD 220
+ S+ID+ Y T P+P AC + RCYW RGKV+GG+S +N M+Y RGN EDYD
Sbjct: 108 SMFLNFIGSDIDYRYNTEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYD 167
Query: 221 EWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLI 280
+W A GN GW Y++VL +FKKSEDN D + EYH KGG V PY ++
Sbjct: 168 DWAADGNPGWAYNDVLPFFKKSEDNLDLD--EVGTEYHAKGGLLPVGKFPYNPPLSYAIL 225
Query: 281 KAWKEKGYPERDLNAENQVGGFICG-DSTNG-------AFIRPIRKKRKNLTILTEAHVT 332
KA +E G+ DLN +N G I + NG AF+RP R R NL IL T
Sbjct: 226 KAGEELGFSVHDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARM-RNNLHILLNTTAT 284
Query: 333 RIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHL 392
+I+ P+ L + + F R+ KKEV+ SAGA+NSP IL+LSG+GPKD L
Sbjct: 285 KILIH--PHTKNVLGVEVSDQF--GSTRKILVKKEVVLSAGAVNSPHILLLSGVGPKDEL 340
Query: 393 TSLNIKTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKV--SDAFEYKESRCGPL 449
+N++T+ +L VG NL +H+T F D + + A EY R G +
Sbjct: 341 QQVNVRTVHNLPGVGKNLHNHVTY------FTNFFIDDADTAPLNWATAMEYLLFRDGLM 394
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
+ TG T+ ADS + PD+Q + T V +N S I +
Sbjct: 395 SGTGISDVTAKLATRYADSPERPDLQLYFGGYLASCARTGQVGELLSNNS-----RSIQI 449
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
P +L P+SRG+I L + DPL PP I + T + D+K ++ I K ++
Sbjct: 450 FPAVLNPRSRGFIGLRSADPLE-PPRIVANYLTHE--------QDVKTLVEGI--KFVIR 498
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + P R+ TV C+
Sbjct: 499 LSQTTPLKQYGMRLDKTVVKG-------------------------------------CE 521
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
+ FG+ YW C Q TG H G+CKMGP DP +VV+ LRVHG+
Sbjct: 522 A-----------HAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGI 570
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDW 727
+ LRV+D SIMPK+ GNT+AP +MIAEK A ++K W
Sbjct: 571 RGLRVMDTSIMPKVSSGNTHAPAVMIAEKGAYLLKRAW 608
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 237/638 (37%), Positives = 321/638 (50%), Gaps = 88/638 (13%)
Query: 101 DKDHKNNNREEQDGDMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPFFADVP 160
D + + R + D +DFI+IG GSAG V+A+RLSE+ +WKVLL+EAG +EP A +P
Sbjct: 48 DPCGRASTRFRSEPDYEYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIP 107
Query: 161 GLAPLISRSNIDWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYD 220
+ S+ID+ Y T P+ AC + RCYW RGKV+GG+S +N M+Y RGN EDYD
Sbjct: 108 SMFLNFIGSDIDYRYNTEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYD 167
Query: 221 EWEAMGNEGWGYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLI 280
+W A GN GW Y +VL +FKKSEDN E+ EYH KGG V PY L+
Sbjct: 168 DWAAQGNPGWSYQDVLPFFKKSEDN--LELDAVGTEYHAKGGLLPVGKFPYNPPLSYALL 225
Query: 281 KAWKEKGYPERDLNAENQVGGFICG-DSTNG-------AFIRPIRKKRKNLTILTEAHVT 332
KA +E G+ +DLN +N G I + NG AF+RP R R NL IL VT
Sbjct: 226 KAGEEMGFSVQDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARM-RNNLHILLNTTVT 284
Query: 333 RIIFDKTPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHL 392
+++ K+ V S +F +R+ KKEVI S GA+NSP+IL+LSG+GPK+ L
Sbjct: 285 KVLIHPG-TKNVVGVEVSDQF---GSMRKILVKKEVIVSGGAVNSPQILLLSGVGPKEDL 340
Query: 393 TSLNIKTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKV--SDAFEYKESRCGPL 449
+N++ + L VG NL +H V F D + + A EY R G +
Sbjct: 341 QKVNVRPVHHLPGVGKNLHNH------VAYFTNFFIDDADTAPLNWATAMEYLLFRDGLM 394
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
+ TG T+ AD ++PD+Q + T V +N S I +
Sbjct: 395 SGTGISDVTAKMATRWADRPNLPDLQLYFGGYLASCARTGQVGELLSNNS-----RAIQI 449
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
P +L PKSRGYI L + DPL PP IF + T + D+K ++ I K +
Sbjct: 450 FPAVLNPKSRGYITLRSADPL-DPPRIFANYLTDE--------RDVKTLVEGI--KFAIR 498
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + P R+ TV +
Sbjct: 499 LSQTSPLKQYGMRLDKTV---------------------------------------VKG 519
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
C S + F + YW C Q TG H G+CKMGP DP +VV+ LRVHGV
Sbjct: 520 CES---------HAFASDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGV 570
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDW 727
+ LRV+D SIMPK+ GNT+AP +MIAEK A ++K W
Sbjct: 571 RGLRVMDTSIMPKVTAGNTHAPAVMIAEKGAYLLKRAW 608
>sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3
SV=1
Length = 528
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 279/623 (44%), Gaps = 110/623 (17%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP-FFADVPGLAPLISRSNIDW 173
D D++++G GSAG V+A+RLS V+ LEAG + F VP + RS IDW
Sbjct: 2 DTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDW 61
Query: 174 NYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGY 232
+Y+T P P +GR YW RGKV+GGSS++N M++ RG A DYDEW A W Y
Sbjct: 62 DYLTEPQPEL-----DGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSY 116
Query: 233 DEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPERD 292
+VL YF++ E N + + + G G + + A +E G+
Sbjct: 117 ADVLGYFRRIE-NVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAAR 175
Query: 293 LNAENQVGGFICGD----------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNK 342
N+ G C ST A+++P +RKNL +LT A TR++ D
Sbjct: 176 PNSPRPEG--FCETVVTQRRGARFSTADAYLKPA-MRRKNLRVLTGATATRVVIDGD--- 229
Query: 343 HKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVD 402
A VE+ + R A++EV+ AGA+NSP++LMLSGIG +DHL +I T+
Sbjct: 230 ----RAVGVEYQSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYH 285
Query: 403 L-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFA 461
+VG NL DHL + V+ F +K Y R G L S G F
Sbjct: 286 APEVGCNLLDHLVT---VLGFDVEKDSLFAAEKPGQLISYLLRRRGMLTSNVGEAYG-FV 341
Query: 462 KTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGY 521
+++ L +PD++ P D P P + G+ PIL+ P+SRG
Sbjct: 342 RSR--PELKLPDLELIFAPAPFYDEALVP---------PAGH--GVVFGPILVAPQSRGQ 388
Query: 522 IQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWNSIPPSNKLK 581
I L + DP P+I P++ + DL D M + ++
Sbjct: 389 ITLRSADP-HAKPVIEPRYLS---DLG---------------GVDRAAMMAGLRICARIA 429
Query: 582 RIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVLTDLNKVF 641
+ +P D S R E+ L + +H ++
Sbjct: 430 QARPLRDLLGSIARPRNSTELDEATLELALATCSHT----------------------LY 467
Query: 642 YKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMP 701
+ GT C+MG D SVVD +LRV GV LRV DAS+MP
Sbjct: 468 HPMGT---------------------CRMG--SDEASVVDPQLRVRGVDGLRVADASVMP 504
Query: 702 KIVRGNTNAPTIMIAEKAADMIK 724
VRG+T+AP+++I EKAAD+I+
Sbjct: 505 STVRGHTHAPSVLIGEKAADLIR 527
>sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316
OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1
Length = 528
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 279/623 (44%), Gaps = 110/623 (17%)
Query: 115 DMTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEP-FFADVPGLAPLISRSNIDW 173
D D++++G GSAG V+A+RLS V+ LEAG + F VP + RS IDW
Sbjct: 2 DTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKNRFIGVPAAFSKLFRSEIDW 61
Query: 174 NYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGY 232
+Y+T P P +GR YW RGKV+GGSS++N M++ RG A DYDEW A W Y
Sbjct: 62 DYLTEPQPEL-----DGREIYWPRGKVLGGSSSMNAMMWVRGFASDYDEWAARAGPRWSY 116
Query: 233 DEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPERD 292
+VL YF++ E N + + + G G + + A +E G+
Sbjct: 117 ADVLGYFRRIE-NVTAAWHFVSGDDSGVTGPLHISRQRSPRSVTAAWLAAARECGFAAAR 175
Query: 293 LNAENQVGGFICGD----------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNK 342
N+ G C ST A+++P +RKNL +LT A TR++ D
Sbjct: 176 PNSPRPEG--FCETVVTQRRGARFSTADAYLKPA-MRRKNLRVLTGATATRVVIDGD--- 229
Query: 343 HKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVD 402
A VE+ + R A++EV+ AGA+NSP++LMLSGIG +DHL +I T+
Sbjct: 230 ----RAVGVEYQSDGQTRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYH 285
Query: 403 L-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGPLQCGVFA 461
+VG NL DHL + V+ F +K Y R G L S G F
Sbjct: 286 APEVGCNLLDHLVT---VLGFDVEKDSLFAAEKPGQLISYLLRRRGMLTSNVGEAYG-FV 341
Query: 462 KTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRGY 521
+++ L +PD++ P D P P + G+ PIL+ P+SRG
Sbjct: 342 RSR--PELKLPDLELIFAPAPFYDEALVP---------PAGH--GVVFGPILVAPQSRGQ 388
Query: 522 IQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWNSIPPSNKLK 581
I L + DP P+I P++ + DL D M + ++
Sbjct: 389 ITLRSADP-HAKPVIEPRYLS---DLG---------------GVDRAAMMAGLRICARIA 429
Query: 582 RIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVLTDLNKVF 641
+ +P D S R E+ L + +H ++
Sbjct: 430 QARPLRDLLGSIARPRNSTELDEATLELALATCSHT----------------------LY 467
Query: 642 YKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMP 701
+ GT C+MG D SVVD +LRV GV LRV DAS+MP
Sbjct: 468 HPMGT---------------------CRMG--SDEASVVDPQLRVRGVDGLRVADASVMP 504
Query: 702 KIVRGNTNAPTIMIAEKAADMIK 724
VRG+T+AP+++I EKAAD+I+
Sbjct: 505 STVRGHTHAPSVLIGEKAADLIR 527
>sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1
Length = 560
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 206/634 (32%), Positives = 289/634 (45%), Gaps = 131/634 (20%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNIDW 173
+D+IIIGAGSAG VLA RL+E +VLLLEAG + F +P LA + +W
Sbjct: 7 YDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYNW 66
Query: 174 NYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGY 232
+ T P+P+ N R RGK +GGSS IN M Y RGNA DYD W + G E W Y
Sbjct: 67 AFETDPEPYMN----NRRMECGRGKGLGGSSLINGMCYLRGNALDYDNWAKIPGLEDWNY 122
Query: 233 DEVLEYFKKSEDNEDKEIYHKNP-EYHGKGGYQTVEWLPYADKNL-PVLIKAWKEKGYPE 290
+ L YFK++E + P +YHG G +V + L I+A E GYP
Sbjct: 123 LQCLPYFKRAETRD------IGPNDYHGGDGPVSVATPKEGNNELYGAFIRAGIEAGYPA 176
Query: 291 -RDLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKTP 340
D+N Q G F D T NG R K+R NLTI T A I F+
Sbjct: 177 TEDVNGYQQEG-FGPMDRTTTPNGRRASTARGYLDIAKQRPNLTIETHATTDVIEFEG-- 233
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
K+ V S E K + +R RA++EV+ AGAI SP+IL SG+G +HL +I +
Sbjct: 234 ---KRAVGVSYE--RKGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIPVV 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFE-YKESRCGP--------LA 450
+L VG NLQDHL + I + +Y A + Y + + G +
Sbjct: 289 HELPGVGENLQDHLE---MYIQYECKKPISLYP-----ALKWYNQPKIGAEWLFFGKGIG 340
Query: 451 STGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVR 510
++ + F +T D + P++Q+H P+++ S N G
Sbjct: 341 ASNQFEAAGFIRTN--DQEEWPNLQYHFLPIAI-----------SYNGKSAVQAHGFQAH 387
Query: 511 PILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDM 570
++ SRG I+L + DP P ++F + + D F D ++ + ++I++
Sbjct: 388 VGSMRSMSRGRIRLTSRDPKAAPSILF-NYMSHDKDWQEF-RDAIR------ITREIIE- 438
Query: 571 WNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQC 630
+PT+D + R E+ P P Q
Sbjct: 439 -------------QPTMDEY-------RGREIS--------------------PGPNVQS 458
Query: 631 GSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQ 690
+ L + + Q T HP G+CKMG DD +VVD RVHG++
Sbjct: 459 DAELDEFVR----------------QHAETAYHPAGSCKMGSADDAMAVVDGAGRVHGLE 502
Query: 691 NLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
LRV+DASIMP I GN NAPTIMIAEK AD ++
Sbjct: 503 GLRVIDASIMPVIATGNLNAPTIMIAEKMADKVR 536
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 285/639 (44%), Gaps = 127/639 (19%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNIDW 173
FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA + +W
Sbjct: 5 FDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 64
Query: 174 NYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWGY 232
Y T P+PH N R RGK +GGSS IN M Y RGNA D+D W +A G E W Y
Sbjct: 65 AYETDPEPHMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGLEDWTY 120
Query: 233 DEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKN--LPVLIKAWKEKGYPE 290
+ L YF+K+E + +YHG G +V P A N +++A + GYP
Sbjct: 121 HDCLPYFRKAESRDIGP-----NDYHGGDGPVSVT-TPKAGNNPLFHAMVEAGVQAGYPR 174
Query: 291 R-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKTP 340
DLN Q GF D T G R ++R NLTI+T A RI+FD
Sbjct: 175 TDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQARERPNLTIVTHATTDRILFDG-- 231
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
K+ S ARA++EV+ AGAI SP+IL SG+GP L L+I +
Sbjct: 232 ---KRASGVSYLIGNANDATEARARREVLLCAGAIASPQILQRSGVGPAALLRELDIALV 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPLAST 452
+L VG NLQDHL + + + T +Y + + + + + G ++
Sbjct: 289 HELPGVGQNLQDHLE---MYLQYACTQPVSLYPALKLLNQPGIGAQWLFTGNGIG---AS 342
Query: 453 GPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPI 512
+ G F +T+ P+IQFH P+++ +N VN G
Sbjct: 343 NQFEAGGFIRTR--PEFAWPNIQFHFLPVAINYNGSNAVNEH-----------GFQAHVG 389
Query: 513 LLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWN 572
++ SRG IQL + DP P ++F + + + D F D + I+ + +D
Sbjct: 390 SMRSPSRGRIQLKSKDPRQHPSILF-NYMSHEQDWQEF--RDAIRITREIMAQPALD--- 443
Query: 573 SIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGS 632
S + + I P +D + + + E T P C C
Sbjct: 444 ----SYRGREISPGIDCQSDAELDAFIREHAETAFH-----------------PSCSC-- 480
Query: 633 VLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNL 692
KMG +D +VVD + RVHGVQ L
Sbjct: 481 ------------------------------------KMG--EDDMAVVDGQGRVHGVQGL 502
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
RVVDASIMP+I+ GN NA TIM+AEK AD I++ L R
Sbjct: 503 RVVDASIMPEIITGNLNATTIMMAEKIADRIRDRQPLPR 541
>sp|C6DKY4|BETA_PECCP Choline dehydrogenase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=betA PE=3 SV=1
Length = 559
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 204/639 (31%), Positives = 290/639 (45%), Gaps = 125/639 (19%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNI 171
M +D+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MEYDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGW 230
+W Y T P+PH N R RGK +GGSS IN M Y RGNA D+D W M G E W
Sbjct: 61 NWAYETDPEPHMN----NRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPGLEDW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNL-PVLIKAWKEKGYP 289
Y + L YF+K+E + + +YHG G +V + L +++A + GYP
Sbjct: 117 SYLDCLPYFRKAETRD-----VGSNDYHGATGPVSVATPKMGNNELFHAMVEAGVQAGYP 171
Query: 290 ERD-LNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
D LN Q G F D T G R K RKNLTI+T A +I+F+
Sbjct: 172 RTDDLNGYQQEG-FGPMDRTVTPKGRRASTARGYLDQAKGRKNLTIVTHALTDKILFEG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKT 399
K+ V V +F + + +A++EV+ AGAI SP+IL SG+GPKD L L+I
Sbjct: 230 ----KRAVG--VAYFKGESPQTVQARREVLLCAGAIASPQILQRSGVGPKDLLQGLDIPV 283
Query: 400 LVDL-KVGHNLQDHL------TSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLAST 452
+ DL VG NLQDHL V +P A + K+ + + + G ++
Sbjct: 284 VHDLPGVGENLQDHLEMYLQYACKEPVSLYP--ALQWFNQPKIGAEWLFSGTGIG---AS 338
Query: 453 GPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPI 512
+ G F +++ D P+IQ+H P+++ +N V G
Sbjct: 339 NQFEAGGFIRSR--DEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQAHVG 385
Query: 513 LLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWN 572
++ SRG +Q+ + D P ++F + + + D F D + I+ + +D +
Sbjct: 386 SMRSLSRGRVQVRSKDAREHPSILF-NYMSTEQDWQEF--RDAIRITREIMAQPALDKYR 442
Query: 573 SIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGS 632
+ I P ++ T + +E + T H + P C C
Sbjct: 443 G-------REISPGLEVQT----DEELDEFIRT-----HAETAFH--------PSCSC-- 476
Query: 633 VLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNL 692
KMG +D +VVD + RVHG++ L
Sbjct: 477 ------------------------------------KMG--EDEMAVVDGQGRVHGMEGL 498
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
RVVDASIMP+I+ GN NA TIMIAEK AD I+ L R
Sbjct: 499 RVVDASIMPQIITGNLNATTIMIAEKIADRIRRRQPLPR 537
>sp|Q6FDF9|BETA_ACIAD Choline dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betA
PE=3 SV=1
Length = 553
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 206/644 (31%), Positives = 292/644 (45%), Gaps = 134/644 (20%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNID 172
TFD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA + +
Sbjct: 5 TFDYIIIGAGSAGNVLAARLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAYPLQGRRYN 64
Query: 173 WNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWG 231
W Y+T P+PH N R RGK +GGSS IN M Y RGNA D + W + G E W
Sbjct: 65 WAYLTEPEPHMN----NRRMECGRGKGLGGSSLINGMCYIRGNAMDLEGWSKLKGLENWT 120
Query: 232 YDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNL--PVLIKAWKEKGYP 289
Y + L Y+KK+E + +YHG G +V P + N+ +++A + GYP
Sbjct: 121 YADCLPYYKKAETRDI-----GGNDYHGDHGPVSVA-TPKDNNNVLFHAMVEAGVQAGYP 174
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T NG R K+R NLTI+T A +I+F
Sbjct: 175 RTDDLNGYQQE-GFGPMDRTVTKNGRRSSTARGYLDMAKERPNLTIITHAMTNKILF--- 230
Query: 340 PNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKT 399
N + + + ++ K+ L++ A KEV+ AGAI SP+IL SG+G L S++I
Sbjct: 231 -NGKQAIGVEYIQGADKRDLKKVMANKEVLLCAGAIASPQILQRSGVGESTFLKSMDIDV 289
Query: 400 LVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKVSDAFE-YKESRCGP--------L 449
+ DL VG NLQDHL + + + +Y A + Y + G +
Sbjct: 290 VHDLPGVGENLQDHLE---MYLQYKCKQPVSLYP-----ALKWYNQPAIGAEWLFLGKGI 341
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F ++ +D + P+IQ+H P+++ +N V G
Sbjct: 342 GASNQFEAGGFIRS--SDEFEWPNIQYHFLPVAINYNGSNAVKEH-----------GFQA 388
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG+I+L + DP P ++F + + + D F A + I+ + +D
Sbjct: 389 HVGSMRSPSRGHIKLKSKDPFEHPSILF-NYMSTEQDWQEFRA--AIRITREIMHQPALD 445
Query: 570 MWNS--IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPI 627
+ I P +L + D+ F N E T H P
Sbjct: 446 PYRGEEISPGKQL-----STDTQLDDFVRNHAE--------------TAYH-------PS 479
Query: 628 CQCGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVH 687
C C KMG +D +VVD + RVH
Sbjct: 480 CSC--------------------------------------KMG--EDDMAVVDHQGRVH 499
Query: 688 GVQNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
G+Q LRVVDASIMP I+ GN NA TIM+AEK AD I+E L R
Sbjct: 500 GLQGLRVVDASIMPLIITGNLNATTIMMAEKIADQIRERAPLPR 543
>sp|Q5HL11|BETA_STAEQ Choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=betA PE=3 SV=1
Length = 572
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 200/632 (31%), Positives = 283/632 (44%), Gaps = 123/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL RLSE K VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGARLSEDKDKNVLVLEAGRSDYFWDLFIQMPAALMFPSGNRFYD 66
Query: 173 WNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWG 231
W Y T +PH + R ARGKV+GGSS+IN MIY RGN DY+ W E G + W
Sbjct: 67 WEYQTDEEPHMGR-----RVDHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMDTWD 121
Query: 232 YDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPER 291
+ L YFKK E Y K G G ++ P + A E GY +
Sbjct: 122 FAHCLPYFKKLETTYGAAPYDK---VRGHDGPIKLKRGPATNPLFKSFFNAGVEAGYHKT 178
Query: 292 -DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPN 341
D+N Q GF D S + A++RP +R+NL + T A VT++IFD+ N
Sbjct: 179 ADVNGYRQE-GFGPFDSQVHHGRRMSASRAYLRPAL-RRRNLDVETRAFVTKLIFDE--N 234
Query: 342 KHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLV 401
KK+ + F K EVI S GA N+P++L LSGIG + L S I+ +
Sbjct: 235 NSKKVTGVT---FKKNGKEHTVHANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRM 291
Query: 402 DL-KVGHNLQDHLT------SDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGP 454
L VG N +DHL V P RM + F K + A++
Sbjct: 292 HLPGVGENFEDHLEVYIQHKCKQPVSLQPSLDVKRMPFIGLQWIFARKGA-----AASNH 346
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ D +D P++ FH P++VR +P A+ + V P+
Sbjct: 347 FEGGGFVRSN--DDVDYPNLMFHFLPIAVR---------YDGQKAPVAHGYQVHVGPMY- 394
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P ++F TK +D + WI+AI V ++I+
Sbjct: 395 -SNSRGSLKIKSKDPFEKPSIVFNYLSTK---------EDEREWIEAIRVARNIL----- 439
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
K K + P S + +E +L +R H P C
Sbjct: 440 -----KQKAMDPFNGGEISPGPQVQTDEEILDWVRKDGETALH---------PSC----- 480
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 481 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 507
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 508 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 539
>sp|Q8CMY2|BETA_STAES Choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=betA PE=3 SV=1
Length = 572
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 199/632 (31%), Positives = 283/632 (44%), Gaps = 123/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL RLSE K VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGARLSEDKDKNVLVLEAGRSDYFWDLFIQMPAALMFPSGNRFYD 66
Query: 173 WNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWG 231
W Y T +PH + R ARGKV+GGSS+IN MIY RGN DY+ W E G + W
Sbjct: 67 WEYQTDEEPHMGR-----RVDHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMDTWD 121
Query: 232 YDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPER 291
+ L YFKK E Y K G G ++ P + A E GY +
Sbjct: 122 FAHCLPYFKKLETTYGAAPYDK---VRGHDGPIKLKRGPATNPLFKSFFNAGVEAGYHKT 178
Query: 292 -DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPN 341
D+N Q GF D S + A++RP +R+NL + T A VT++IFD+ N
Sbjct: 179 ADVNGYRQE-GFGPFDSQVHHGRRMSASRAYLRPAL-RRRNLDVETRAFVTKLIFDE--N 234
Query: 342 KHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLV 401
KK+ + F K EVI S GA N+P++L LSGIG + L S I+ +
Sbjct: 235 NSKKVTGVT---FKKNGKEHTVHANEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRM 291
Query: 402 DL-KVGHNLQDHLT------SDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLASTGP 454
L VG N +DHL V P RM + F K + A++
Sbjct: 292 HLPGVGENFEDHLEVYIQHKCKQPVSLQPSLDVKRMPFIGLQWIFARKGA-----AASNH 346
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ D +D P++ FH P++VR +P A+ + V P+
Sbjct: 347 FEGGGFVRSN--DDVDYPNLMFHFLPIAVR---------YDGQKAPVAHGYQVHVGPMY- 394
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P ++F TK +D + W++AI V ++I+
Sbjct: 395 -SNSRGSLKIKSKDPFEKPSIVFNYLSTK---------EDEREWVEAIRVARNIL----- 439
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
K K + P S + +E +L +R H P C
Sbjct: 440 -----KQKAMDPFNGGEISPGPQVQTDEEILDWVRKDGETALH---------PSC----- 480
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 481 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 507
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 508 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 539
>sp|Q9X2M2|BETA_STAXY Choline dehydrogenase OS=Staphylococcus xylosus GN=betA PE=3 SV=1
Length = 560
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 292/636 (45%), Gaps = 121/636 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE-PFFADVPGLAPLISRSN---ID 172
++D+IIIG GSAG VL RLSE VL+LEAG + P+ + A L+ + D
Sbjct: 4 SYDYIIIGGGSAGSVLGGRLSEDVSNNVLVLEAGRSDYPWDLLIQMPAALMYPAGNKLYD 63
Query: 173 WNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWG 231
W Y T P+PH R G ARGKV+GGSS+IN MIY RGN DY++W + G E W
Sbjct: 64 WIYETTPEPH-MDGRKVGH---ARGKVLGGSSSINGMIYQRGNPMDYEKWAKPEGMESWD 119
Query: 232 YDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPER 291
Y L YFK+ E + K Y G G + P + A E GY +
Sbjct: 120 YAHCLPYFKRLETTFGSK---KGDPYRGHHGPIKLRRGPADNPLFQAFFDAGVEAGYNKT 176
Query: 292 -DLNAENQVG-GFICGDSTNG-------AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNK 342
D+N Q G G NG A++ P K RKNL + T A VT++ F+ NK
Sbjct: 177 PDVNGFRQEGFGPFDSQVHNGRRVSASRAYLHPAMK-RKNLEVQTRAFVTKLNFEG--NK 233
Query: 343 HKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVD 402
+ F K + KEVI S GAINSP++L LSGIG +HL SL I+ +
Sbjct: 234 VTGVT------FKKNGKEHTESAKEVILSGGAINSPQLLQLSGIGDSEHLRSLGIEPRIH 287
Query: 403 L-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGPLQ 456
L VG N +DHL + + P + + K K+ ++ R G AS +
Sbjct: 288 LPGVGENFEDHLE---VYVQHACKQPVSMQPSLNKLKMPFIGLQWILGRKGAAASNH-FE 343
Query: 457 CGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKP 516
G F ++ D +D P++ FH P++VR +P A+ + V P+
Sbjct: 344 GGGFVRSN--DDVDYPNLMFHFLPIAVR---------YDGTKAPAAHGYQVHVGPMY--S 390
Query: 517 KSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNSIP 575
SRG++++ + DP P +F T+ +D + W++AI V ++I+ ++
Sbjct: 391 NSRGHLKIKSKDPFEKPEFVFNYLSTE---------EDKREWVEAIKVARNILKQ-KALD 440
Query: 576 PSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVLT 635
P N I P + T EE++ R G T + P C
Sbjct: 441 PFNG-GEISPGPEVQTD-------EEIIEWVKRDGETALH----------PSC------- 475
Query: 636 DLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDAR-LRVHGVQNLRV 694
+C+MGP D SVVD +VHG++NLRV
Sbjct: 476 -------------------------------SCRMGPASDEMSVVDPETFKVHGMENLRV 504
Query: 695 VDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILD 730
VDAS+MP+ GN ++P +M+AE+A+D+I+ LD
Sbjct: 505 VDASVMPRTTNGNIHSPVLMMAERASDIIRGKKPLD 540
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 284/639 (44%), Gaps = 125/639 (19%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNI 171
M +D+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGW 230
+W Y T P+PH + R RGK +GGSS IN M Y RGNA D+D W M G E W
Sbjct: 61 NWAYETDPEPHM----NDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNL-PVLIKAWKEKGYP 289
Y + L YF+K+E + +YHG G +V + L +++A + GYP
Sbjct: 117 SYLDCLPYFRKAETRDVGA-----NDYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYP 171
Query: 290 ERD-LNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
D LN Q G F D T G R K RKNLTI+T A RI+FD
Sbjct: 172 RTDDLNGYQQEG-FGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKT 399
K+ V V +F + + A+A++EV+ AGAI SP+IL SG+GPKD L L+I
Sbjct: 230 ----KRAVG--VAYFKGESAQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDISV 283
Query: 400 LVDL-KVGHNLQDHL------TSDGIVIAFPKTATDRMYKKKVSDAFEYKESRCGPLAST 452
+ DL VG NLQDHL V +P A + K+ + + + G ++
Sbjct: 284 VHDLPGVGENLQDHLEMYLQYACKEPVSLYP--ALQWFNQPKIGAEWLFNGTGIG---AS 338
Query: 453 GPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPI 512
+ G F +++ D P+IQ+H P+++ +N V G
Sbjct: 339 NQFEAGGFIRSR--DEFTWPNIQYHFLPVAINYNGSNAVKEH-----------GFQAHVG 385
Query: 513 LLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWN 572
++ SRG +Q+ + D P ++F + + + D F D + I+ + +D +
Sbjct: 386 SMRSLSRGRVQVRSKDAREHPSILF-NYMSTEQDWQEF--RDAIRITREIMAQPALDKYR 442
Query: 573 SIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGS 632
+ I P + T + +E + T H + P C C
Sbjct: 443 G-------REISPGLAVQT----DEELDEFIRT-----HAETAFH--------PSCSCKM 478
Query: 633 VLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNL 692
D++ V D C+ HG++ L
Sbjct: 479 GEDDMSVV-------DGQGCV---------------------------------HGMEGL 498
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
RVVDASIMP+I+ GN NA TIMIAEK AD I+ L R
Sbjct: 499 RVVDASIMPQIITGNLNATTIMIAEKIADRIRRRQPLPR 537
>sp|Q4A0Q1|BETA_STAS1 Choline dehydrogenase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=betA
PE=3 SV=1
Length = 560
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 201/637 (31%), Positives = 293/637 (45%), Gaps = 123/637 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE-PFFADVPGLAPLISRSN---ID 172
++D+IIIG GSAG VL +R+SE VL+LEAG + P+ + A L+ + D
Sbjct: 4 SYDYIIIGGGSAGSVLGSRISEDVSNNVLVLEAGRSDYPWDLLIQMPAALMYPAGNKLYD 63
Query: 173 WNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWG 231
W Y T P+PH R G ARGKV+GGSS+IN MIY RGN DY++W + G + W
Sbjct: 64 WIYETTPEPH-MDGRKVGH---ARGKVLGGSSSINGMIYQRGNPMDYEKWAKPEGMDSWD 119
Query: 232 YDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPER 291
Y L YFK+ E K+ ++ G G + P + A E GY +
Sbjct: 120 YAHCLPYFKRLEKTFGAT---KDDQFRGHHGPIKLRRGPADNPLFQAFFDAGVEAGYNKT 176
Query: 292 -DLNAENQVG-GFICGDSTNG-------AFIRPIRKKRKNLTILTEAHVTRIIFDKTPNK 342
D+N Q G G NG A++ P KRKNL + T A VT++ F+
Sbjct: 177 PDVNGFRQEGFGPFDSQVHNGRRVSASRAYLHPAM-KRKNLEVQTRAFVTKLNFEGN--- 232
Query: 343 HKKLVAKSVEFFYKKKLRRARAK-KEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLV 401
K +KK R KEVI S GAINSP++L LSGIG +HL SL I+ +
Sbjct: 233 ------KVTGVTFKKNGREHTVNAKEVILSGGAINSPQLLQLSGIGDSEHLRSLGIEPRI 286
Query: 402 DL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGPL 455
L VG N +DHL + + P + + K K+ ++ R G AS
Sbjct: 287 HLPGVGENFEDHLE---VYVQHACKEPVSMQPSLNKLKMPFIGLQWIFGRKGAAASNH-F 342
Query: 456 QCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLK 515
+ G F ++ + +D P++ FH P++VR +P A+ + V P+
Sbjct: 343 EGGGFVRSN--EDVDYPNLMFHFLPIAVR---------YDGTKAPAAHGYQVHVGPMY-- 389
Query: 516 PKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNSI 574
SRG++++ + DP P +F T+ +D + W++AI V ++I+ ++
Sbjct: 390 SNSRGHLKIKSKDPFVKPDFVFNYLSTE---------EDKREWVEAIKVARNILGQ-KAL 439
Query: 575 PPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVL 634
P N I P + T EE++ R G T + P C
Sbjct: 440 DPYNG-GEISPGPEVQTD-------EEIIEWVKRDGETALH----------PSC------ 475
Query: 635 TDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDAR-LRVHGVQNLR 693
+C+MGP D SVVD +VHG++NLR
Sbjct: 476 --------------------------------SCRMGPASDEMSVVDPETFKVHGMENLR 503
Query: 694 VVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILD 730
VVDAS+MP+ GN ++P +M+AEKAAD+I+ LD
Sbjct: 504 VVDASVMPRTTNGNIHSPVLMMAEKAADIIRGKKPLD 540
>sp|Q4ZM63|BETA_PSEU2 Choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=betA PE=3 SV=1
Length = 568
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 288/638 (45%), Gaps = 125/638 (19%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNIDW 173
+D+IIIGAGSAG LA RL+E VLLLEAG + F +P LA + +W
Sbjct: 7 YDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 66
Query: 174 NYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWGY 232
Y T P+PH N R RGK +GGSS IN M Y RGNA DYD W + G E W Y
Sbjct: 67 AYETEPEPHMN----NRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLEDWSY 122
Query: 233 DEVLEYFKKSEDNEDKEIYHKNP-EYHGKGGYQTVEWLPYADKN--LPVLIKAWKEKGYP 289
+ L YF+K+E + P +YHG G +V P A N +++A + G+P
Sbjct: 123 LDCLPYFRKAETRD------IGPNDYHGGEGPVSVT-TPKAGNNPLFHAMVEAGVQAGFP 175
Query: 290 ERD-LNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
D LN Q G F D T NG R KKR LTI+T A RI+F+
Sbjct: 176 RTDDLNGYQQEG-FGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFEG- 233
Query: 340 PNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKT 399
K+ V + +ARA+KEV+ GAI SP+IL SG+GP + L L+I
Sbjct: 234 ----KRAVGVAYLVGDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPV 289
Query: 400 LVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKK-----KVSDAFEYKESRCGPLASTG 453
+ DL VG NLQDHL + + + T +Y + + E+ G + ++
Sbjct: 290 VHDLPGVGQNLQDHLE---MYLQYACTQPVSLYPSLKWWNQPAIGAEWMFLGTG-IGASN 345
Query: 454 PLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPIL 513
+ G F ++ +++ + P+IQ+H P+++ + N + G
Sbjct: 346 QFEAGGFIRS--SEAFEWPNIQYHFLPVAI-----------NYNGTKGVQEHGFQAHVGS 392
Query: 514 LKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWNS 573
++ SRG +Q+ + DP P ++F + + D F D ++ + I+++ +D +
Sbjct: 393 MRSPSRGRVQVKSKDPREYPSILF-NYMASEQDWQEF-RDGIR-LTREIMQQPALDPYRG 449
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ I P +D + + E H ++ P C C
Sbjct: 450 -------REISPGIDVQSDEALDQFVRE---------HAETAYH--------PSCSC--- 482
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLR 693
K GT D +VVD + RVHG+Q+LR
Sbjct: 483 ---------KMGT----------------------------DEMAVVDGQGRVHGLQSLR 505
Query: 694 VVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
VVDASIMP I GN NAPTIMIAEK AD I+ L R
Sbjct: 506 VVDASIMPIITTGNLNAPTIMIAEKIADKIRGRQPLPR 543
>sp|Q48CM7|BETA_PSE14 Choline dehydrogenase OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=betA PE=3 SV=1
Length = 568
Score = 212 bits (539), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 289/640 (45%), Gaps = 129/640 (20%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNIDW 173
+D+IIIGAGSAG LA RL+E VLLLEAG + F +P LA + +W
Sbjct: 7 YDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 66
Query: 174 NYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWGY 232
Y T P+PH N R RGK +GGSS IN M Y RGNA DYD W + G E W Y
Sbjct: 67 AYETEPEPHMN----NRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLEDWSY 122
Query: 233 DEVLEYFKKSEDNEDKEIYHKNP-EYHGKGGYQTVEWLPYADKN--LPVLIKAWKEKGYP 289
+ L YF+K+E + P +YHG G +V P A N +++A + G+P
Sbjct: 123 LDCLPYFRKAETRD------IGPNDYHGGEGPVSVT-KPKAGNNPLFHAMVEAGVQAGFP 175
Query: 290 ERD-LNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
D LN Q G F D T NG R KKR LTI+T A RI+F+
Sbjct: 176 RTDDLNGYQQEG-FGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFEG- 233
Query: 340 PNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKT 399
K+ V + +ARA+KEV+ GAI SP+IL SG+GP + L L+I
Sbjct: 234 ----KRAVGVAYLVGDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPV 289
Query: 400 LVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPLAS 451
+ DL VG NLQDHL + + + T +Y + + + + + G +
Sbjct: 290 VHDLPGVGQNLQDHLE---MYLQYACTQPVSLYPSLKWWNQPAIGAKWMFLGTGIG---A 343
Query: 452 TGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRP 511
+ + G F ++ +++ + P+IQ+H P+++ + N + G
Sbjct: 344 SNQFEAGGFIRS--SEAFEWPNIQYHFLPVAI-----------NYNGTKGVQEHGFQAHV 390
Query: 512 ILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMW 571
++ SRG +Q+ + DP P ++F + + + D F D ++ + I+++ +D +
Sbjct: 391 GSMRSPSRGRVQVKSKDPREYPSILF-NYMSSEQDWQEF-RDGIR-LTREIMQQPALDPY 447
Query: 572 NSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCG 631
+ I P +D + + E H ++ P C C
Sbjct: 448 RG-------REISPGIDVQSDEALDQFVRE---------HAETAYH--------PSCSC- 482
Query: 632 SVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQN 691
K GT D +VVD + RVHG+Q+
Sbjct: 483 -----------KMGT----------------------------DEMAVVDGQGRVHGLQS 503
Query: 692 LRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
LRVVDASIMP I GN NAPTIMIAEK AD I+ L R
Sbjct: 504 LRVVDASIMPIITTGNLNAPTIMIAEKIADKIRGRQPLPR 543
>sp|C3K3D3|BETA_PSEFS Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25)
GN=betA PE=3 SV=1
Length = 567
Score = 212 bits (539), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 284/638 (44%), Gaps = 125/638 (19%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNIDW 173
+D+II+GAGSAG LA RL+E + VLLLEAG + F +P LA + +W
Sbjct: 5 YDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFPLQGRRYNW 64
Query: 174 NYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGY 232
Y T P+PH R RGK +GGSS IN M Y RGNA DYD W + G E W Y
Sbjct: 65 AYETDPEPHM----DGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLENWTY 120
Query: 233 DEVLEYFKKSEDNEDKEIYHKNP-EYHGKGGYQTVEWLPYADKN--LPVLIKAWKEKGYP 289
+ L YF+K+E + P +YHG G +V P A N +++A + GYP
Sbjct: 121 LDCLPYFRKAETRD------IGPNDYHGGEGPVSVT-TPKAGNNPLFHAMVEAGVQAGYP 173
Query: 290 ERD-LNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
D LN Q G F D T NG R KKR LTI+T A +++F+
Sbjct: 174 RTDDLNGYQQEG-FGPMDRTVTKNGRRASTARGYLDTAKKRSTLTIVTHALTDKVLFEG- 231
Query: 340 PNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKT 399
K+ V ++ ARA+KEV+ +GAI SP++L SG+GP L SL+I
Sbjct: 232 ----KRAVGVRYLIGAAEERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPV 287
Query: 400 LVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKV-----SDAFEYKESRCGPLASTG 453
+ DL VG NLQDHL + + + T +Y + + E+ + G + ++
Sbjct: 288 VHDLPGVGENLQDHLE---LYLQYACTQPVSLYPSLLWYNQPAIGAEWLFNGTG-IGASN 343
Query: 454 PLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPIL 513
+ G F +++ D P+IQ+H P+++ +N V G
Sbjct: 344 QFEAGGFIRSR--PEFDWPNIQYHFLPVAINYNGSNGVKEH-----------GFQAHMGS 390
Query: 514 LKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWNS 573
++ SRG +QL + +P P ++F + + D F D ++ + I+++ +D +
Sbjct: 391 MRSPSRGRVQLKSKNPRDYPSILF-NYMATEQDWQEF-RDGIR-LTREIMQQPALDPYRG 447
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ I P +D T + E T P C C
Sbjct: 448 -------REISPGIDVQTDEQLDKFIREHAETAFH-----------------PSCSC--- 480
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLR 693
K GT D +VVD RVHG+Q LR
Sbjct: 481 ---------KMGT----------------------------DEMAVVDGEGRVHGMQGLR 503
Query: 694 VVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
VVDASIMP I GN NAPTIMIAEK AD I+ L R
Sbjct: 504 VVDASIMPIITTGNLNAPTIMIAEKIADKIRGRQPLPR 541
>sp|Q0T7N0|BETA_SHIF8 Choline dehydrogenase OS=Shigella flexneri serotype 5b (strain
8401) GN=betA PE=3 SV=1
Length = 556
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFM----NNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P V+ T + + +E V NH P
Sbjct: 442 QYRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
GTCKMG D SVVD RVHG+
Sbjct: 475 -----------------------------------CGTCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALSR 539
>sp|B0KN19|BETA_PSEPG Choline dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betA
PE=3 SV=1
Length = 565
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 201/633 (31%), Positives = 282/633 (44%), Gaps = 129/633 (20%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNIDW 173
FD+II+GAGSAG LA RL+E VLLLEAG + F +P LA + +W
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 174 NYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWGY 232
Y T P+PH R RGK +GGSS IN M Y RGNA D+D W E G + W Y
Sbjct: 65 AYETDPEPHM----DGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLQDWTY 120
Query: 233 DEVLEYFKKSEDNEDKEIYHKNP-EYHGKGGYQTVEWLPYADKN--LPVLIKAWKEKGYP 289
+ L YF+K+E + P +YHG G +V P A N +++A + GYP
Sbjct: 121 LDCLPYFRKAETRD------IGPNDYHGGEGPVSVA-TPKAGNNPLFHAMVEAGVQAGYP 173
Query: 290 E-RDLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q G F D + NG R KKR NLTI+T A R++FD
Sbjct: 174 RTEDLNGYQQEG-FGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLFDG- 231
Query: 340 PNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKT 399
K+ V + ++ ARA+KEVI S+GAI SP++L SG+GP+ L SL+I
Sbjct: 232 ----KRAVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPV 287
Query: 400 LVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPLAS 451
+ DL VG NLQDHL + + + T +Y + + + +K + G +
Sbjct: 288 VHDLPGVGENLQDHLE---LYLQYACTQPVSLYPSLLWWNQPAIGAEWMFKGTGIG---A 341
Query: 452 TGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRP 511
+ + G F +T+ P+IQ+H P+++ +N V G
Sbjct: 342 SNQFEAGGFIRTR--PEFKWPNIQYHFLPVAINYNGSNGVKEH-----------GFQAHM 388
Query: 512 ILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMW 571
++ +RG IQ + DP P ++F + + + D F D ++ + I+ + +D +
Sbjct: 389 GSMRSPARGRIQAKSKDPRQHPSILF-NYMSTEQDWQEF-RDGIR-LTREIMAQPALDPY 445
Query: 572 NSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCG 631
+ I P D T + E T P C C
Sbjct: 446 RG-------REISPGADVQTDEQLDKFIREHAETAFH-----------------PSCSC- 480
Query: 632 SVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQN 691
K GT D +VVD RVHG++
Sbjct: 481 -----------KMGTDDM----------------------------AVVDGEGRVHGMKG 501
Query: 692 LRVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
LRVVDASIMP I+ GN NA TIMIAEK +D I+
Sbjct: 502 LRVVDASIMPLIITGNLNATTIMIAEKISDKIR 534
>sp|Q88CW6|BETA_PSEPK Choline dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betA
PE=3 SV=1
Length = 565
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 201/630 (31%), Positives = 283/630 (44%), Gaps = 123/630 (19%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNIDW 173
FD+II+GAGSAG LA RL+E VLLLEAG + F +P LA + +W
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 174 NYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGWGY 232
Y T P+P+ R C RGK +GGSS IN M Y RGNA D+D W E G E W Y
Sbjct: 65 AYETDPEPYMDGRRME--C--GRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDWTY 120
Query: 233 DEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKN--LPVLIKAWKEKGYPE 290
+ L YF+K+E + +YHG G +V P A N +++A + GYP
Sbjct: 121 LDCLPYFRKAETRDIGP-----NDYHGGEGPVSVT-TPKAGNNPLFHAMVEAGVQAGYPR 174
Query: 291 -RDLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKTP 340
DLN Q G F D T NG R KKR NLTI+T A R++FD
Sbjct: 175 TEDLNGYQQEG-FGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFDG-- 231
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
K+ + + ++ ARA+KEVI S+GAI SP++L SG+GP+ L SL+I +
Sbjct: 232 ---KRAIGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVV 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKV-----SDAFEYKESRCGPLASTGP 454
DL VG NLQDHL + + + T +Y + + E+ + G + ++
Sbjct: 289 HDLPGVGENLQDHLE---LYLQYACTQPVSLYPSLLWWNQPAIGAEWMFNGTG-IGASNQ 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F +T+ P+IQ+H P+++ +N V G +
Sbjct: 345 FEAGGFIRTR--PEFKWPNIQYHFLPVAINYNGSNGVKEH-----------GFQAHMGSM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWNSI 574
+ +RG IQ+ + DP P ++F + + + D F D ++ + I+ + +D +
Sbjct: 392 RSPARGRIQVKSKDPRQHPSILF-NYMSTEQDWQEF-RDGIR-LTREIMAQPALDPYRG- 447
Query: 575 PPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSVL 634
+ I P D T + E T P C C
Sbjct: 448 ------REISPGADVQTDEQLDKFIREHAETAFH-----------------PSCSC---- 480
Query: 635 TDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRV 694
KMG D +VVD RVHG++ LRV
Sbjct: 481 ----------------------------------KMGTDDM--AVVDGEGRVHGMKGLRV 504
Query: 695 VDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
VDASIMP I+ GN NA TIMIAEK +D I+
Sbjct: 505 VDASIMPLIITGNLNATTIMIAEKISDKIR 534
>sp|P17444|BETA_ECOLI Choline dehydrogenase OS=Escherichia coli (strain K12) GN=betA PE=1
SV=1
Length = 556
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDMGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P V+ T + + +E V NH P
Sbjct: 442 QYRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
GTCKMG D SVVD RVHG+
Sbjct: 475 -----------------------------------CGTCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPR 539
>sp|B1J0W6|BETA_ECOLC Choline dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=betA PE=3 SV=1
Length = 556
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDMGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P V+ T + + +E V NH P
Sbjct: 442 QYRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
GTCKMG D SVVD RVHG+
Sbjct: 475 -----------------------------------CGTCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPR 539
>sp|B1XE52|BETA_ECODH Choline dehydrogenase OS=Escherichia coli (strain K12 / DH10B)
GN=betA PE=3 SV=1
Length = 556
Score = 209 bits (531), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDMGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P V+ T + + +E V NH P
Sbjct: 442 QYRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
GTCKMG D SVVD RVHG+
Sbjct: 475 -----------------------------------CGTCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPR 539
>sp|Q4K4K7|BETA_PSEF5 Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=betA PE=3 SV=1
Length = 567
Score = 209 bits (531), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 205/639 (32%), Positives = 287/639 (44%), Gaps = 127/639 (19%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNIDW 173
+D+II+GAGSAG LA RL+E + VLLLEAG + F +P LA + +W
Sbjct: 5 YDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 174 NYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWG 231
Y T P+PH NGR RGK +GGSS IN M Y RGNA DYD W + G E W
Sbjct: 65 AYETDPEPHM-----NGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDWT 119
Query: 232 YDEVLEYFKKSEDNEDKEIYHKNP-EYHGKGGYQTVEWLPYADKN--LPVLIKAWKEKGY 288
Y + L YF+K+E + P +YHG G +V P A N +++A + GY
Sbjct: 120 YLDCLPYFRKAETRD------IGPNDYHGGEGPVSVT-TPKAGNNPLFHAMVEAGVQAGY 172
Query: 289 PE-RDLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDK 338
P DLN Q G F D T G R KKR LTI+T A +I+F+
Sbjct: 173 PRTEDLNGYQQEG-FGPMDRTVTPKGRRASTARGYLDTAKKRSTLTIVTHALTDKILFEG 231
Query: 339 TPNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIK 398
K+ V S ++ ARA+KEVI S+GAI SP++L SG+GP+ L SL+I
Sbjct: 232 -----KRAVGVSYLQGSTEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIP 286
Query: 399 TLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKV-----SDAFEYKESRCGPLAST 452
+ DL VG NLQDHL + + + T +Y + + E+ + G + ++
Sbjct: 287 VVHDLPGVGENLQDHLE---LYLQYACTQPVSLYPSLLWWNQPAIGAEWLFNGTG-IGAS 342
Query: 453 GPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPI 512
+ G F +T+ + + P+IQ+H P+++ +N V G
Sbjct: 343 NQFEAGGFIRTR--EEFEWPNIQYHFLPVAINYNGSNGVKEH-----------GFQAHMG 389
Query: 513 LLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWN 572
++ SRG +QL + DP P ++F + + D F D ++ + I+++ +D +
Sbjct: 390 SMRSPSRGRVQLKSKDPRQHPSILF-NYMATEQDWQEF-RDGIR-LTREIMQQPALDPFR 446
Query: 573 SIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGS 632
+ I P ++ T + E T P C C
Sbjct: 447 G-------REISPGIEVQTDEQLDKFVREHAETAFH-----------------PSCSC-- 480
Query: 633 VLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNL 692
K GT D M D G V HG+Q L
Sbjct: 481 ----------KMGTDD---------------------MAVVDGQGRV-------HGMQGL 502
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
RVVDASIMP I GN NAPTIM+AEK AD I+ L R
Sbjct: 503 RVVDASIMPIITTGNLNAPTIMMAEKIADKIRGRQPLPR 541
>sp|B7N8L3|BETA_ECOLU Choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=betA PE=3 SV=1
Length = 556
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 202/635 (31%), Positives = 281/635 (44%), Gaps = 129/635 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T +G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGSAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ DL VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHDLPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P V+ T + + +E V NH P
Sbjct: 442 QYRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
GTCKMG D +VVD RVHG+
Sbjct: 475 -----------------------------------CGTCKMG--YDEMAVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKMADMIR 532
>sp|Q8NUM0|BETA_STAAW Choline dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=betA
PE=3 SV=1
Length = 569
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 286/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPAM-KRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A KEVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-KEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|Q6G664|BETA_STAAS Choline dehydrogenase OS=Staphylococcus aureus (strain MSSA476)
GN=betA PE=3 SV=1
Length = 569
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 286/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPAM-KRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A KEVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-KEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|B7UJG4|BETA_ECO27 Choline dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=betA PE=3 SV=1
Length = 556
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 200/641 (31%), Positives = 281/641 (43%), Gaps = 127/641 (19%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
Y + L Y++K+E + E N + G G + P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE----NDYHGGDGPVSVITSKPGVNPLFEAMIEAGMQAGYPR 172
Query: 291 R-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKTP 340
DLN Q GF D T +G R K R NLTI T A IIFD
Sbjct: 173 TDDLNGYQQE-GFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG-- 229
Query: 341 NKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIK 398
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ---KRAVG--VEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
Query: 399 TLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPLA 450
+ +L VG NLQDHL + + + +Y + ++ + + + G
Sbjct: 285 LVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPRIGAEWLFGGTGVG--- 338
Query: 451 STGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVR 510
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQCH 385
Query: 511 PILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDM 570
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 386 VGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRTTREIMHQPALDQ 442
Query: 571 WNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQC 630
+ + I P V+ T + + +E V NH P
Sbjct: 443 YRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP----- 474
Query: 631 GSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQ 690
GTCKMG D +VVD RVHG++
Sbjct: 475 ----------------------------------CGTCKMG--YDEMAVVDGEGRVHGLE 498
Query: 691 NLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGKEALPR 539
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 205/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDC- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ DL VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHDLPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P + T + + +E V NH P
Sbjct: 442 QYRG-------REISPGTECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
CG TCKMG D SVVD RVHG+
Sbjct: 475 CG-----------------------------------TCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKEALPR 539
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 205/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDC- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ DL VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHDLPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P + T + + +E V NH P
Sbjct: 442 QYRG-------REISPGTECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
CG TCKMG D SVVD RVHG+
Sbjct: 475 CG-----------------------------------TCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKEALPR 539
>sp|B6I074|BETA_ECOSE Choline dehydrogenase OS=Escherichia coli (strain SE11) GN=betA
PE=3 SV=1
Length = 556
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P + T + + +E V NH P
Sbjct: 442 QYRG-------REISPGTECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
CG TCKMG D SVVD RVHG+
Sbjct: 475 CG-----------------------------------TCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPR 539
>sp|A7ZWV4|BETA_ECOHS Choline dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betA
PE=3 SV=1
Length = 556
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P + T + + +E V NH P
Sbjct: 442 QYRG-------REISPGTECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
CG TCKMG D SVVD RVHG+
Sbjct: 475 CG-----------------------------------TCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPR 539
>sp|B7M2V5|BETA_ECO8A Choline dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betA
PE=3 SV=1
Length = 556
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P + T + + +E V NH P
Sbjct: 442 QYRG-------REISPGTECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
CG TCKMG D SVVD RVHG+
Sbjct: 475 CG-----------------------------------TCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPR 539
>sp|B7L439|BETA_ECO55 Choline dehydrogenase OS=Escherichia coli (strain 55989 / EAEC)
GN=betA PE=3 SV=1
Length = 556
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P + T + + +E V NH P
Sbjct: 442 QYRG-------REISPGTECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
CG TCKMG D SVVD RVHG+
Sbjct: 475 CG-----------------------------------TCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPR 539
>sp|A7ZI50|BETA_ECO24 Choline dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=betA PE=3 SV=1
Length = 556
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 204/642 (31%), Positives = 282/642 (43%), Gaps = 129/642 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T G R K R NLTI T A IIFD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P + T + + +E V NH P
Sbjct: 442 QYRG-------REISPGTECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
CG TCKMG D SVVD RVHG+
Sbjct: 475 CG-----------------------------------TCKMG--YDEMSVVDGEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGQEALPR 539
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 222/449 (49%), Gaps = 51/449 (11%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE--PFFADVPGLAPLISRSNIDWNY 175
FD+I++G GSAGCVLA RLSE +V L+EAG + P G A + + + W+
Sbjct: 5 FDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHT-WDL 63
Query: 176 MTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAMGNEGWGYDEV 235
+T P HA N + + +G+++GG S+IN ++ RG+ D+D W A G +GW + +V
Sbjct: 64 LTEPQKHAN----NRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRDV 119
Query: 236 LEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPER-DLN 294
+YF +SE N ++ +HG G V L + +++ +E G P D N
Sbjct: 120 QKYFIRSEGN---AVFSGT--WHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFN 174
Query: 295 AENQVGGFI----------CGDSTNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTPNKHK 344
+Q G I C ST ++RP RKNLT++T A V +I+F+ T
Sbjct: 175 GASQEGAGIYQMTIRNNRRC--STAVGYLRPA-LGRKNLTVVTRALVLKIVFNGT----- 226
Query: 345 KLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTLVDL- 403
A V++ L A A +E++ +AGAI +PK++MLSG+GP HL I + DL
Sbjct: 227 --RATGVQYIANGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLP 284
Query: 404 KVGHNLQDHLTSDGIVIAFPKTATDRMYKK---KVSDAFEYKESRCGPLASTGPLQCGVF 460
VG NLQDH D IV + Y+K + EY R GP+AS ++ G F
Sbjct: 285 GVGENLQDHFGVD-IVAELKTDESFDKYRKLHWMLWAGLEYTMFRSGPVASN-VVEGGAF 342
Query: 461 AKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILLKPKSRG 520
+ S VPD+QFH A + S GIT+ +L+PKSRG
Sbjct: 343 WYSD--PSSGVPDLQFH---------FLAEAGAEAGVTSVPKGASGITLNSYVLRPKSRG 391
Query: 521 YIQLNATDPLWGPPLIFPKFFTKKPDLDV 549
++L + DP P++ P F DL+
Sbjct: 392 TVRLRSADPRVN-PMVDPNFLGDPADLET 419
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
Query: 660 TIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLRVVDASIMPKIVRGNTNAPTIMIAEKA 719
T HP TCKMG +DD SVVD RL+VHG++ +R+ D+S+MP ++ NTNA TIMI+E+A
Sbjct: 466 TSYHPTCTCKMG-RDDM-SVVDPRLKVHGLEGIRICDSSVMPSLLGSNTNAATIMISERA 523
Query: 720 ADMIK 724
AD I+
Sbjct: 524 ADFIQ 528
>sp|Q1RFM3|BETA_ECOUT Choline dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC)
GN=betA PE=3 SV=2
Length = 562
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 281/635 (44%), Gaps = 129/635 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T +G R K R NLTI T A I FD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P V+ T + + +E V NH P
Sbjct: 442 QYRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
GTCKMG D +VVDA RVHG+
Sbjct: 475 -----------------------------------CGTCKMG--YDEMAVVDAEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKMADMIR 532
>sp|B7MCD0|BETA_ECO45 Choline dehydrogenase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=betA PE=3 SV=1
Length = 562
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 281/635 (44%), Gaps = 129/635 (20%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFMN----NRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWL-PYADKNLPVLIKAWKEKGYP 289
Y + L Y++K+E + E +YHG G +V P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE-----NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP 171
Query: 290 ER-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q GF D T +G R K R NLTI T A I FD
Sbjct: 172 RTDDLNGYQQE-GFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFDG- 229
Query: 340 PNKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNI 397
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ----KRAVG--VEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDI 283
Query: 398 KTLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPL 449
+ +L VG NLQDHL + + + +Y + K+ + + + G
Sbjct: 284 PLVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVG-- 338
Query: 450 ASTGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITV 509
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 -ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQC 384
Query: 510 RPILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVD 569
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 385 HVGSMRSPSRGHVRIKSRDPHQHPAILF-NYMSHEQDWQEF--RDAIRITREIMHQPALD 441
Query: 570 MWNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQ 629
+ + I P V+ T + + +E V NH P
Sbjct: 442 QYRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP---- 474
Query: 630 CGSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGV 689
GTCKMG D +VVDA RVHG+
Sbjct: 475 -----------------------------------CGTCKMG--YDEMAVVDAEGRVHGL 497
Query: 690 QNLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
+ LRVVDASIMP+I+ GN NA TIMI EK ADMI+
Sbjct: 498 EGLRVVDASIMPQIITGNLNATTIMIGEKMADMIR 532
>sp|Q0TKW1|BETA_ECOL5 Choline dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=betA PE=3 SV=2
Length = 556
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 200/641 (31%), Positives = 281/641 (43%), Gaps = 127/641 (19%)
Query: 116 MTFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVP-GLAPLISRSNI 171
M FD+IIIGAGSAG VLA RL+E VLLLEAG + F +P LA +
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 172 DWNYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
+W Y T P+P N R RGK +GGSS IN M Y RGNA D D W + G E W
Sbjct: 61 NWAYETEPEPFM----NNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENW 116
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
Y + L Y++K+E + E N + G G + P + +I+A + GYP
Sbjct: 117 SYLDCLPYYRKAETRDVGE----NDYHGGDGPVSVITSKPGVNPLFEAMIEAGMQAGYPR 172
Query: 291 R-DLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKTP 340
DLN Q GF D T +G R K R NLTI T A IIFD
Sbjct: 173 TDDLNGYQQE-GFGPMDRTVTPHGRRASTSRGYLDQAKSRPNLTIRTHAMTDHIIFDG-- 229
Query: 341 NKHKKLVAKSVEFFYKKKL--RRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIK 398
K+ V VE+ RA A KEV+ AGAI SP+IL SG+G + L +I
Sbjct: 230 ---KRAVG--VEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIP 284
Query: 399 TLVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMY-------KKKVSDAFEYKESRCGPLA 450
+ +L VG NLQDHL + + + +Y + ++ + + + G
Sbjct: 285 LVHELPGVGENLQDHLE---MYLQYECKEPVSLYPALQWWNQPRIGAEWLFGGTGVG--- 338
Query: 451 STGPLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVR 510
++ + G F +++ + P+IQ+H P+++ +N V G
Sbjct: 339 ASNHFEAGGFIRSR--EEFAWPNIQYHFLPVAINYNGSNAVKEH-----------GFQCH 385
Query: 511 PILLKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDM 570
++ SRG++++ + DP P ++F + + + D F D + I+ + +D
Sbjct: 386 VGSMRSPSRGHVRIKSRDPHQHPGILF-NYMSHEQDWQEF--RDAIRITREIMHQPALDQ 442
Query: 571 WNSIPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQC 630
+ + I P V+ T + + +E V NH P
Sbjct: 443 YRG-------REISPGVECQT----DEQLDEFV------------RNHAETAFHP----- 474
Query: 631 GSVLTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQ 690
GTCKMG D +VVD RVHG++
Sbjct: 475 ----------------------------------CGTCKMG--YDEMAVVDGEGRVHGLE 498
Query: 691 NLRVVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
LRVVDASIMP+I+ GN NA TIMI EK ADMI+ L R
Sbjct: 499 GLRVVDASIMPQIITGNLNATTIMIGEKIADMIRGKEALPR 539
>sp|Q3K5H3|BETA_PSEPF Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1)
GN=betA PE=3 SV=1
Length = 567
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 201/638 (31%), Positives = 282/638 (44%), Gaps = 125/638 (19%)
Query: 118 FDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEE---PFFADVPG-LAPLISRSNIDW 173
FD+II+GAGSAG LA RL+E + VLLLEAG + F +P LA + +W
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNW 64
Query: 174 NYMTMPDPHACKARPNGRCYWARGKVMGGSSTINYMIYARGNAEDYDEWEAM-GNEGWGY 232
Y T P+PH R RGK +GGSS IN M Y RGNA DYD W + G E W Y
Sbjct: 65 AYETDPEPHM----DGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDWSY 120
Query: 233 DEVLEYFKKSEDNEDKEIYHKNP-EYHGKGGYQTVEWLPYADKN--LPVLIKAWKEKGYP 289
+ L YF+K+E + P +YHG G +V P A N +++A + GYP
Sbjct: 121 LDCLPYFRKAETRD------IGPNDYHGGDGPVSVT-TPKAGNNPLFHAMVEAGVQAGYP 173
Query: 290 E-RDLNAENQVGGFICGDST---NGAFIRPIR------KKRKNLTILTEAHVTRIIFDKT 339
DLN Q G F D T NG R KKR LTI+T A +++F+
Sbjct: 174 RTEDLNGYQQEG-FGPMDRTVTPNGRRASTARGYLDVAKKRSTLTIVTHALTDKVLFEG- 231
Query: 340 PNKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKT 399
K+ V ++ ARA+KEVI +GAI SP++L SG+GP L SL+I
Sbjct: 232 ----KRAVGVRYLVGAAEERVEARARKEVIVCSGAIASPQLLQRSGVGPAKLLESLDIPV 287
Query: 400 LVDL-KVGHNLQDHLTSDGIVIAFPKTATDRMYKKKV-----SDAFEYKESRCGPLASTG 453
+ DL VG NLQDHL + + + T +Y + + E+ + G + ++
Sbjct: 288 VHDLPGVGENLQDHLE---LYLQYACTQPVSLYPSLLWYNQPAIGAEWLFNGTG-IGASN 343
Query: 454 PLQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPIL 513
+ G F +T+ + P+IQ+H P+++ +N V G
Sbjct: 344 QFEAGGFIRTR--PEFEWPNIQYHFLPVAINYNGSNGVKEH-----------GFQAHMGS 390
Query: 514 LKPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAIVKKDIVDMWNS 573
++ SRG +Q+ + DP P ++F + + D F D ++ + I+++ +D +
Sbjct: 391 MRSPSRGRVQVKSKDPRQHPSILF-NYMATEQDWQEF-RDGIR-LTREIMQQPALDAFRG 447
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ I P ++ T + E T P C C
Sbjct: 448 -------REISPGIEVQTDEQLDKFIREHAETAFH-----------------PSCSC--- 480
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDARLRVHGVQNLR 693
K GT D M D G V HG+Q LR
Sbjct: 481 ---------KMGTDD---------------------MAVVDGEGRV-------HGMQGLR 503
Query: 694 VVDASIMPKIVRGNTNAPTIMIAEKAADMIKEDWILDR 731
VVDASIMP I GN NAPTIM+AEK AD I+ L R
Sbjct: 504 VVDASIMPIITTGNLNAPTIMMAEKIADKIRGRQPLPR 541
>sp|A8Z5A4|BETA_STAAT Choline dehydrogenase OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=betA PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|Q6GDJ1|BETA_STAAR Choline dehydrogenase OS=Staphylococcus aureus (strain MRSA252)
GN=betA PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|P60337|BETA_STAAN Choline dehydrogenase OS=Staphylococcus aureus (strain N315)
GN=betA PE=1 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|P60336|BETA_STAAM Choline dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=betA PE=1 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|A6QK99|BETA_STAAE Choline dehydrogenase OS=Staphylococcus aureus (strain Newman)
GN=betA PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|Q5HCU1|BETA_STAAC Choline dehydrogenase OS=Staphylococcus aureus (strain COL) GN=betA
PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|Q2YWJ5|BETA_STAAB Choline dehydrogenase OS=Staphylococcus aureus (strain bovine RF122
/ ET3-1) GN=betA PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|A5IW37|BETA_STAA9 Choline dehydrogenase OS=Staphylococcus aureus (strain JH9) GN=betA
PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|Q2FV11|BETA_STAA8 Choline dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325)
GN=betA PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|Q2FDP9|BETA_STAA3 Choline dehydrogenase OS=Staphylococcus aureus (strain USA300)
GN=betA PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
>sp|A6U4Z2|BETA_STAA2 Choline dehydrogenase OS=Staphylococcus aureus (strain JH1) GN=betA
PE=3 SV=1
Length = 569
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 285/632 (45%), Gaps = 125/632 (19%)
Query: 117 TFDFIIIGAGSAGCVLANRLSEIKKWKVLLLEAGIEEPF---FADVPGLAPLISRSNI-D 172
++D++IIG GSAG VL NRLSE K +VL+LEAG + F F +P S + D
Sbjct: 7 SYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPSGNKFYD 66
Query: 173 WNYMTMPDPHACKARPNGR-CYWARGKVMGGSSTINYMIYARGNAEDYDEW-EAMGNEGW 230
W Y T +PH GR ARGKV+GGSS+IN MIY RGN DY+ W E G E W
Sbjct: 67 WIYSTDEEPHM-----GGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMETW 121
Query: 231 GYDEVLEYFKKSEDNEDKEIYHKNPEYHGKGGYQTVEWLPYADKNLPVLIKAWKEKGYPE 290
+ L YFKK E Y K + G G ++ P + A E GY +
Sbjct: 122 DFAHCLPYFKKLEKTYGAAPYDK---FRGHDGPIKLKRGPATNPLFQSFFDAGVEAGYHK 178
Query: 291 R-DLNAENQVGGFICGD---------STNGAFIRPIRKKRKNLTILTEAHVTRIIFDKTP 340
D+N Q GF D S + A++ P KRKNLT+ T A VT I ++
Sbjct: 179 TPDVNGFRQE-GFGPFDSQVHRGRRMSASRAYLHPA-MKRKNLTVETRAFVTEIHYEGR- 235
Query: 341 NKHKKLVAKSVEFFYKKKLRRARAKKEVISSAGAINSPKILMLSGIGPKDHLTSLNIKTL 400
A V + KL A EVI S GA N+P++L LSGIG + L S I+
Sbjct: 236 ------RATGVTYKKNGKLHTIDA-NEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPR 288
Query: 401 VDL-KVGHNLQDHLTSDGIVIAF----PKTATDRMYKKKVS-DAFEYKESRCGPLASTGP 454
V L VG N +DHL + I P + + K++ ++ +R G AS
Sbjct: 289 VHLPGVGENFEDHLE---VYIQHKCKEPVSLQPSLDIKRMPFIGLQWIFTRTGAAASNH- 344
Query: 455 LQCGVFAKTKLADSLDVPDIQFHHDPMSVRDWITNPVNASSTNMSPFAYYDGITVRPILL 514
+ G F ++ + +D P++ FH P++VR + A G V +
Sbjct: 345 FEGGGFVRSN--NEVDYPNLMFHFLPIAVR-----------YDGQKAAVAHGYQVHVGPM 391
Query: 515 KPKSRGYIQLNATDPLWGPPLIFPKFFTKKPDLDVFVADDLKPWIKAI-VKKDIVDMWNS 573
SRG +++ + DP P + F T+ +D K W++AI V ++I+ +
Sbjct: 392 YSNSRGSLKIKSKDPFEKPSIRFNYLSTE---------EDKKEWVEAIRVARNILSQ-KA 441
Query: 574 IPPSNKLKRIKPTVDSWTSSFRNNRYEEVVLTRLRIGHTRVTHNHLFKKLPPPICQCGSV 633
+ P N I P + T EE++ R G T + P C
Sbjct: 442 MDPFNG-GEISPGPEVQTD-------EEILDWVRRDGETALH----------PSC----- 478
Query: 634 LTDLNKVFYKFGTWDYWACIAMQFTGTIQHPVGTCKMGPKDDPGSVVDA-RLRVHGVQNL 692
+ KMGP DP +VVD ++VHG++NL
Sbjct: 479 ---------------------------------SAKMGPASDPMAVVDPLTMKVHGMENL 505
Query: 693 RVVDASIMPKIVRGNTNAPTIMIAEKAADMIK 724
RVVDAS MP+ GN +AP +M+AEKAAD+I+
Sbjct: 506 RVVDASAMPRTTNGNIHAPVLMLAEKAADIIR 537
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 299,470,664
Number of Sequences: 539616
Number of extensions: 13536792
Number of successful extensions: 34340
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 33140
Number of HSP's gapped (non-prelim): 432
length of query: 731
length of database: 191,569,459
effective HSP length: 125
effective length of query: 606
effective length of database: 124,117,459
effective search space: 75215180154
effective search space used: 75215180154
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)